Phyre 2 alignment of P33012 with c3hxxA_

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Job Description | P33012
Confidence | 1.45% | Date | Thu Jan 5 11:50:47 GMT 2012
Rank | 82 | Aligned Residues | 22
% Identity | 36% | Template | c3hxxA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:alanyl-trna synthetase; | PDBTitle: crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp
Resolution | 2.11 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 128 | . | 130 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | 140 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | P | C | F | E | V | Y | L | N | . | . | . | . | . | . | . | . | . | . | . | N | G | A | E | D | G | Y | W | D | I | E | M | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | P | C | T | E | I | F | Y | D | H | G | D | H | I | W | G | G | P | P | G | S | P | E | E | D | G | D | R | Y | I | E | I | W
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | S | T | T | T | T | S | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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