Phyre 2 alignment of P33012 with c1yfsB_

Return to main results | Retrieve Phyre Job Id

Job Description | P33012
Confidence | 1.71% | Date | Thu Jan 5 11:50:47 GMT 2012
Rank | 63 | Aligned Residues | 22
% Identity | 23% | Template | c1yfsB_
PDB info | PDB header:ligase | Chain: B: PDB Molecule:alanyl-trna synthetase; | PDBTitle: the crystal structure of alanyl-trna synthetase in complex2 with l-alanine
Resolution | 2.08 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 128 | . | 130 | . | . | . | . | . | . |  |  | . | . | . | 140 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | P | C | F | E | V | Y | L | N | . | . | N | G | A | E | D | G | Y | W | D | I | E | M | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | P | S | S | E | I | Y | V | D | R | G | E | E | Y | E | G | D | E | R | Y | L | E | I | W
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions