Phyre 2 alignment of P33012 with c3kk4B_

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Job Description | P33012
Confidence | 1.47% | Date | Thu Jan 5 11:50:47 GMT 2012
Rank | 80 | Aligned Residues | 31
% Identity | 13% | Template | c3kk4B_
PDB info | PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:uncharacterized protein bp1543; | PDBTitle: uncharacterized protein bp1543 from bordetella pertussis tohama i
Resolution | 1.95 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | R | T | V | A | G | F | H | L | V | G | P | W | E | Q | T | V | K | K | G | F | E | Q | L | M | M | W | V | D | S | K | N | I | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | L | R | L | H | G | V | A | T | S | V | R | L | E | Q | . | . | . | L | F | W | D | V | L | E | E | I | A | A | R | D | G | X | R
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |  |  |  | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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