55 c3qh4A_ Probab=99.72   E-value=2.4e-14  Score=151.19  Aligned_columns=238  Identities=18%

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH--HHHHHCCEEEEEECCCCCCCC
Q ss_conf             001631588985379865589999658898878750899932888722447789889--899978919999748888866
Q batch____       411 AANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR--LSLLDRGFVYAIVHVRGGGEL  488 (686)
Q Consensus       411 ~~~~~~~~~~~~s~DG~~ip~~l~~p~~~~~~~~~P~il~~yGGp~~~~~~~f~~~~--~~l~~~G~~v~~~n~RGs~g~  488 (686)
                      .....++.+.+++.||.+|+++++.|++    ++.|+|||+|||........+....  .++.+.|++|+.+|||++.++
T Consensus        52 ~~~~~~~~~~~~~~~g~~i~~~v~~P~~----~~~Pvii~~HGGg~~~~~~~~~~~~~~~~~~~~G~~V~~~~Yrl~p~~  127 (314)
T c3qh4A_          52 AAGVAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEH  127 (314)
T ss_dssp             HHCCEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCC----CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf             6787336899857999779999984788----987199997276641576431158999999867979999638743222


Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC---CCHHHEEEEEECHHHHHHHHHHH----CCCCCEEEEEEECCCCCH
Q ss_conf             78899977856185403479999999998899---88865999842889999999987----297514799970783203
Q batch____       489 GQQWYEDGKFLKKKNTFNDYLDACDALLKLGY---GSPSLCYAMGGSAGGMLMGVAIN----QRPELFHGVIAQVPFVDV  561 (686)
Q Consensus       489 G~~w~~a~~~~~~~~~~~D~ia~~~~Li~~g~---~d~~ri~i~G~S~GG~l~~~~~~----~~pdlf~a~v~~~pv~D~  561 (686)
                      +..+.-           +|..++.+++.+...   .+....++.|+|.||.+++.+..    ..+....++++..+.++.
T Consensus       128 ~~~~~~-----------~d~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (314)
T c3qh4A_         128 PYPAAL-----------HDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDD  196 (314)
T ss_dssp             CTTHHH-----------HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCS
T ss_pred             CCHHHH-----------HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf             212238-----------999998875322333102222321123321111026788887520376443203420344465


Q ss_pred             HHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH-----------HCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf             554038663445567888088889999998887-----------095877730799806998517898588689999999
Q batch____       562 VTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKS-----------YSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVA  630 (686)
Q Consensus       562 ~~~~~~~~~~~~~~~~~e~G~p~~~~~~~~~~~-----------~SP~~~v~~~~~P~~Li~~g~~D~rV~~~~~~k~~~  630 (686)
                      ...        ......................           .||..+......|++||+||++|  |...|+.+|++
T Consensus       197 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D--~~~~~~~~~~~  266 (314)
T c3qh4A_         197 RPT--------ASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEID--PFRDEVLDYAQ  266 (314)
T ss_dssp             SCC--------HHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEES--TTHHHHHHHHH
T ss_pred             CCC--------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCC--CCHHHHHHHHH
T ss_conf             655--------54322456755676888875422467755461007620111058863999847997--20168999999


Q ss_pred             HHHHCCCCCEEEEEEEECCCCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99985999704999980788887---77898999999999999999984
Q batch____       631 KLRELKTDDHLLLLCTDMDSGHG---GKSGRFKSYEGVAMEYAFLVALA  676 (686)
Q Consensus       631 ~L~~~~~~~~~v~l~~~~~~GHg---~~~~~~~~~~~~a~~~~fl~~~~  676 (686)
                      +|+++|++   +.+++++++|||   ......+..+..+...+||-..+
T Consensus       267 ~L~~~G~~---v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~~~lr~~~  312 (314)
T c3qh4A_         267 RLLGAGVS---TELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF  312 (314)
T ss_dssp             HHHHTTCC---EEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCC---EEEEEECCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             99977996---89999888852033307886899999999999998851