BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (307 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria Rep... 285 2e-75 UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobac... 258 2e-67 UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collins... 247 3e-64 UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteob... 185 2e-45 UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter ... 182 1e-44 UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter ... 179 7e-44 UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (Ec... 174 4e-42 UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n... 173 6e-42 UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 168 2e-40 UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 ... 166 1e-39 UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (Ec... 156 1e-36 UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteoba... 151 3e-35 UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen l... 149 8e-35 UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Ta... 147 7e-34 UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Acti... 137 4e-31 UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 137 6e-31 UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alph... 136 1e-30 UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n... 134 3e-30 UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen l... 133 6e-30 UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 133 9e-30 UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoide... 132 2e-29 UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 131 3e-29 UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen l... 129 1e-28 UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteob... 127 7e-28 UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermoco... 125 2e-27 UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 125 2e-27 UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) ... 124 3e-27 UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 124 3e-27 UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen l... 123 6e-27 UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) ... 123 9e-27 UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfit... 118 2e-25 UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit H... 118 3e-25 UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 115 1e-24 UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4... 115 2e-24 UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n... 114 4e-24 UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 108 2e-22 UniRef50_C4KGS6 Formate hydrogenlyase subunit 4 (HycD) n=13 Tax=... 106 1e-21 UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 106 1e-21 UniRef50_A6Q2X3 Ni-Fe hydrogenase, membrane subunit HycD/HyfD n=... 105 2e-21 UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax... 104 3e-21 UniRef50_A3DNE8 Hydrogenase-4 component C n=1 Tax=Staphylothermu... 103 9e-21 UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 103 9e-21 UniRef50_C6PUG6 Hydrogenase, membrane subunit 3-like protein (Ec... 103 1e-20 UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 103 1e-20 UniRef50_A6UVJ9 Hydrogenase, component C-formate hydrogenlyase s... 94 4e-18 UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 94 4e-18 UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (... 93 1e-17 UniRef50_Q6APE9 Related to hydrogenase, component C-formate hydr... 91 6e-17 UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 90 1e-16 UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=... 90 1e-16 UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota... 89 2e-16 UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L... 87 9e-16 UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina... 86 1e-15 UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 85 4e-15 UniRef50_A7HGW5 Respiratory-chain NADH dehydrogenase, subunit 1 ... 84 7e-15 UniRef50_B6WWH2 Putative uncharacterized protein n=1 Tax=Desulfo... 84 8e-15 UniRef50_Q21TB7 NAD-dependent dehydrogenase subunit n=1 Tax=Rhod... 82 2e-14 UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 ... 81 4e-14 UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organ... 81 4e-14 UniRef50_B6BMI9 Membrane-spanning protein of formate hydrogenase... 81 4e-14 UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=S... 79 2e-13 UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Acidulipr... 78 5e-13 UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 77 7e-13 UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcace... 77 1e-12 UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rh... 76 1e-12 UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 74 8e-12 UniRef50_D0WEF6 Putative Ech hydrogenase, subunit EchA n=1 Tax=S... 74 9e-12 UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=... 73 1e-11 UniRef50_A6DBV1 Ech Hydrogenase, Subunit n=1 Tax=Caminibacter me... 73 2e-11 UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirel... 72 2e-11 UniRef50_C1XWY4 Formate hydrogenlyase subunit 4 n=1 Tax=Meiother... 72 2e-11 UniRef50_B8J1E4 Respiratory-chain NADH dehydrogenase subunit 1 n... 72 2e-11 UniRef50_A9FF80 Formate hydrogenlyase subunit n=1 Tax=Sorangium ... 72 3e-11 UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 70 7e-11 UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyce... 70 7e-11 UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n... 70 8e-11 UniRef50_B8D5G5 Hydrogenase-4 component C n=1 Tax=Desulfurococcu... 70 1e-10 UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergis... 69 1e-10 UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Cone... 69 2e-10 UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmenta... 69 2e-10 UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 69 2e-10 UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n... 69 2e-10 UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Ru... 69 2e-10 UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 69 2e-10 UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Meth... 68 4e-10 UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n... 68 5e-10 UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemm... 67 6e-10 UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n... 67 1e-09 UniRef50_A2SQY6 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanom... 67 1e-09 UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax... 66 1e-09 UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 66 1e-09 UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 66 2e-09 UniRef50_A2STX8 Ech hydrogenase subunit B n=1 Tax=Methanocorpusc... 65 3e-09 UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subuni... 65 3e-09 UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Ga... 65 4e-09 UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 ... 64 6e-09 UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=c... 64 7e-09 UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-li... 64 7e-09 UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobac... 64 8e-09 UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchae... 64 8e-09 UniRef50_B1ZSE0 Respiratory-chain NADH dehydrogenase, subunit 1 ... 63 1e-08 UniRef50_A3DKI3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 63 1e-08 UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=An... 63 2e-08 UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=B... 63 2e-08 UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=... 62 2e-08 UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=... 62 2e-08 UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 62 3e-08 UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidet... 62 3e-08 UniRef50_B5Y905 Hydrogenase-4 component C n=1 Tax=Coprothermobac... 61 4e-08 UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus ... 61 5e-08 UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemm... 61 5e-08 UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=... 60 7e-08 UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=He... 60 8e-08 UniRef50_C5CEV6 Respiratory-chain NADH dehydrogenase subunit 1 n... 60 9e-08 UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=... 60 1e-07 UniRef50_Q8TY38 Membrane protein related to formate hydrogenlyas... 60 1e-07 UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=F... 59 2e-07 UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella... 59 2e-07 UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=ce... 59 2e-07 UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=C... 59 3e-07 UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Ba... 59 3e-07 UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase su... 58 3e-07 UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 58 3e-07 UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 ... 58 4e-07 UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=B... 58 5e-07 UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 57 7e-07 UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=... 57 8e-07 UniRef50_A0L9R7 Membrane bound protein complex subunit mbxM n=1 ... 57 9e-07 UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Ta... 57 9e-07 UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 57 1e-06 UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Ba... 57 1e-06 UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsi... 57 1e-06 UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=A... 56 1e-06 UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Meth... 56 2e-06 UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasm... 56 2e-06 UniRef50_Q04P29 Formate hydrogenase, subunit C n=4 Tax=Leptospir... 56 2e-06 UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bact... 55 3e-06 UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=c... 55 3e-06 UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacte... 55 3e-06 UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax... 54 5e-06 UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=C... 54 9e-06 UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 53 1e-05 UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 53 1e-05 UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=... 53 1e-05 UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=D... 53 1e-05 UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=B... 53 2e-05 UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=... 52 2e-05 UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=B... 52 2e-05 UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=A... 52 2e-05 UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=c... 52 2e-05 UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 52 2e-05 UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 52 2e-05 UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax... 52 2e-05 UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Ta... 52 3e-05 UniRef50_A2BJ97 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=H... 52 3e-05 UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 52 3e-05 UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexu... 52 3e-05 UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=P... 51 4e-05 UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi... 51 4e-05 UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=... 51 6e-05 UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 51 6e-05 UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Ta... 50 7e-05 UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=ce... 50 9e-05 UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteri... 50 9e-05 UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular or... 50 9e-05 UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=C... 50 9e-05 UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter... 50 1e-04 UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomy... 50 1e-04 UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 50 1e-04 UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 50 1e-04 UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax... 50 1e-04 UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycet... 50 1e-04 UniRef50_B0SCV0 Formate hydrogenase, subunit C n=2 Tax=Leptospir... 49 1e-04 UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 ... 49 2e-04 UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria... 49 2e-04 UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=E... 49 2e-04 UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferr... 49 2e-04 UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 49 2e-04 UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinom... 49 2e-04 UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 49 3e-04 UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=... 49 3e-04 UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax... 49 3e-04 UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=V... 49 3e-04 UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=A... 49 3e-04 UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bd... 49 3e-04 UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 48 3e-04 UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=M... 48 4e-04 UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=A... 48 4e-04 UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiph... 48 4e-04 UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 48 4e-04 UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloro... 48 5e-04 UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax... 47 6e-04 UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=... 47 6e-04 UniRef50_Q57940 Putative NADH-ubiquinone oxidoreductase MJ0520 n... 47 6e-04 UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular or... 47 7e-04 UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=U... 47 7e-04 UniRef50_B3IUI3 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=L... 47 0.001 UniRef50_A7C247 Respiratory-chain NADH dehydrogenase, subunit 1 ... 47 0.001 UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=c... 47 0.001 UniRef50_Q9B893 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=S... 47 0.001 UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=... 46 0.001 UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=M... 46 0.001 UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=... 46 0.002 UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular or... 46 0.002 UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=P... 46 0.002 UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax... 46 0.002 UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 45 0.002 UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 45 0.003 UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=L... 45 0.003 UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomyce... 45 0.003 UniRef50_Q6EF18 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 45 0.003 UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 Re... 45 0.005 UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=T... 44 0.007 UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=... 44 0.007 UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=A... 44 0.009 UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular... 44 0.009 UniRef50_B8D3Q2 Respiratory-chain NADH dehydrogenase, subunit 1 ... 44 0.011 UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 43 0.011 UniRef50_O79072 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 43 0.011 UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 43 0.013 UniRef50_P24887 NADH-ubiquinone oxidoreductase chain 1 n=9 Tax=R... 43 0.015 UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax... 43 0.016 UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Ac... 43 0.017 UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax... 42 0.025 UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax... 42 0.029 UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=C... 42 0.033 UniRef50_UPI000008E4AB NADH dehydrogenase subunit 1 n=1 Tax=Trit... 42 0.034 UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 42 0.039 UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 42 0.040 UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 41 0.056 UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 41 0.061 UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 41 0.068 UniRef50_B6RQZ1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=A... 40 0.074 UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax... 40 0.074 UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=E... 40 0.083 UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax... 40 0.093 UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=I... 40 0.095 UniRef50_D2D0L0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=L... 40 0.095 UniRef50_A4K9F1 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 40 0.097 >UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria RepID=HYFC_ECOLI Length = 315 Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 158/303 (52%), Positives = 221/303 (72%), Gaps = 7/303 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 V++ L QA++L + PL +GI+R RAR+H+RRGPG+ Q+YRDI KL RQ V P +SG Sbjct: 11 VIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGL 70 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL P+V++ ML +A ALP+ SP GDLITL+YL A+ RFFFA+SGLDTGSPF Sbjct: 71 MFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPF 130 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---YHWPLSQSIPLVLAL 179 +GASRE LG+LVEPML+L L V A +AGST+I I++T+ ++ PL+ VLAL Sbjct: 131 AGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTT----VLAL 186 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 AC FA FIEMGK+PFD+AEAEQELQEGPL+EYSG+G + KWG+ LKQ+V+ +FV +F Sbjct: 187 LACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALF 246 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +P+G+ + + LL +LV+ ++K+++ ++ ++ EN++AR R + +TW GF A L Sbjct: 247 LPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAAL 306 Query: 300 AFV 302 A+V Sbjct: 307 AWV 309 >UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobacteriaceae RepID=C7MLM2_CRYCD Length = 309 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 131/301 (43%), Positives = 200/301 (66%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++ ++QA++L +APL SG R RA++H RRGP LQ+Y D+IKL+ RQ + S Sbjct: 3 EIIIAIVQAVLLTLLAPLFSGTARWMRAKMHTRRGPSPLQDYYDLIKLIKRQDLHTKDSS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +V RL P + +G ML +A +P++T SP+P L D+IT++YL A+ RFFFA++G+D+ Sbjct: 63 FVSRLMPPLFLGSMLILACGMPMITRLSPVPVLADIITIIYLLALPRFFFALAGVDSSDA 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + +G RE ++GVLVEP ++L L+VAA G+TN+ + + ++ I +V+A A Sbjct: 123 YAGVGGIRELLVGVLVEPSMMLALFVAALACGTTNVGLMGAQIAEGNVTSPIAVVIAGVA 182 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A A +IE+GKLPFD AEAEQE+QEGPL EYSG+ ++K +S+KQ++V+ FV +F+P Sbjct: 183 FAMACYIELGKLPFDAAEAEQEIQEGPLQEYSGTSLSMVKLSMSMKQILVISWFVAIFLP 242 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 +G T LL+ V+ +VK+ V L+ ++FEN +AR+R +T R TW G A +A Sbjct: 243 FGSAATLAPMDLLVGAVLFLVKITVIGLICSIFENVVARVRWKLTGRQTWTVVGVAVMAL 302 Query: 302 V 302 V Sbjct: 303 V 303 >UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E719_9ACTN Length = 307 Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/296 (43%), Positives = 193/296 (65%), Gaps = 3/296 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGR-QSVGPDA 59 M+++ + Q LV+ VAP SG+ RV RA++HNRRGP +LQ+YRD+ KL+ R +SV D+ Sbjct: 1 MNIVLAMAQGLVVMLVAPFFSGLARVIRAKMHNRRGPSILQDYRDLAKLMARPESVSSDS 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S +V R+ P + + V +A LP+ T+ SP+P GD IT++Y A++RFFFA+SG+D+ Sbjct: 61 S-FVLRIMPPLFLAVSFMLAMGLPMFTLQSPMPVFGDAITIMYALALSRFFFALSGVDSS 119 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 + + G RE ++ VL+EP +L+ L+ A V GST+I+ + + +S + ++LA Sbjct: 120 NAYAGFGGIRELLMSVLIEPSMLIALFTVAIVCGSTDIATMGQHIVTGNVSSVVAVILAG 179 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A A A ++E+GKLPFD AEAEQELQEGPL+E SG +MK + +KQ+VV+ F +F Sbjct: 180 VAFAAACYMELGKLPFDQAEAEQELQEGPLAELSGPSLAMMKLAMGMKQVVVVAWFTSIF 239 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 IPWG+ T L+ A+V +VK +V +V + ENS++R R + TWA G Sbjct: 240 IPWGEPATIGVTALVGAVVF-LVKCLVDFVVCGVLENSVSRSRFKVLGNQTWAVVG 294 >UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteobacteria RepID=A6DB52_9PROT Length = 308 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 153/270 (56%), Gaps = 11/270 (4%) Query: 18 PLLSGITRVARARLHNRRGP-GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVML 76 P G+ R+ RA++ R+GP Q YRD+ KL R V P + WVF+ PY+M GV+ Sbjct: 20 PFFDGVARMIRAKMQARKGPPDPFQTYRDLYKLFKRGRVYPKNAHWVFKYAPYIMFGVVA 79 Query: 77 TIATALPVVTVGSPLPQ--LGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 T+ ALP+ T + + DL +LYL A RF F ++ D+G+ F AIG SRE M+G Sbjct: 80 TMLAALPI-TYATDFKAGVVSDLFVILYLGAFFRFIFGVASNDSGNAFAAIGGSREQMIG 138 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALCACAFATFIEMGKL 193 V VEP+++L L V +A ++N+ I V HW + P +A A +A ++EM + Sbjct: 139 VFVEPVIVLCLIVVMLLAKTSNLVEIQYMVKHWQIGYIYPSFAIASIAFLWAIYVEMARN 198 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL 253 P+DLAEAEQELQEG L EYSGS + + +KQ V++ +F+ +F PW Sbjct: 199 PYDLAEAEQELQEGVLGEYSGSDLAISHMTMLIKQFVMIGLFLSIFEPW------NVEFP 252 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRL 283 LLAL+I I+K V + +N R +L Sbjct: 253 LLALLIYIIKAGVFYVGAVFIDNFGPRYKL 282 >UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter RepID=A7ZBL0_CAMC1 Length = 306 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 8/289 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L + Q +V+ VAPL G+ R RA+L +++G Q YRDIIKL R P+ S Sbjct: 3 TILLMIFQVVVIVLVAPLFDGMARKLRAKLQSKQGSDFFQTYRDIIKLFRRGRTVPECSH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVV-TVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 WVFR P+ + + A+P+ + + D+ +LYL A+ RF F + +D+G+ Sbjct: 63 WVFRWAPFFLFATSAAVLAAIPITYSKDTVFGAYSDIFVILYLGALLRFVFGAASMDSGN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLAL 179 PF A G RE MLGV VEP++++ L V A ++N+ I + V + IP +A Sbjct: 123 PFAATGGGREQMLGVYVEPVMIMCLIVVMLAAKTSNLVEIQEMVRTGVIGYQIPSFAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A + ++E G+ PFDLAEAEQELQEG L EY+GS G+++ + LKQ ++ +F+ +F Sbjct: 183 IAFLWCMYVETGRKPFDLAEAEQELQEGVLGEYAGSDLGLVQASLILKQFAMIGLFLSIF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 PW F LA+++ ++K V + +N R ++ + R Sbjct: 243 EPWNFSNPF------LAIIVFVIKTGVFYVAAVFIDNFGPRFKMTSSLR 285 >UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA8_CAMFF Length = 306 Score = 179 bits (455), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 177/309 (57%), Gaps = 17/309 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +VL ++Q V A+ PL GI R R ++ +R+G +LQ Y DI KLL R P+ Sbjct: 3 AVLLMILQLFVALALTPLFDGIARNLRGKIQSRKGSPILQTYYDIFKLLKRSRTAPNCVH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLP-QLGDLITLLYLFAIARFFFAISGLDTGS 120 W F+ +PY++ V + +P+ GS + D+I ++YL A+ RF F ++ LD+ + Sbjct: 63 WFFKFSPYMLFSVCAMLVMMIPITYGGSANAGAVSDIIVVVYLVALFRFIFGVASLDSAN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS-QSIPLVLAL 179 P+ A+GASRE+++ + +EP++++ L V A +A +TN++ I + + + + S +A Sbjct: 123 PYAAVGASRESLIAIYIEPIMIICLVVIAMLAKTTNLAIIKELIQNAEIGYSSASYAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A +A ++E G+ PFDLAEAEQE+QEG + EYSG +++ + LKQ ++ F+ +F Sbjct: 183 VAFLWAMYVETGRKPFDLAEAEQEVQEGVIGEYSGKDLALVEMALMLKQFAMISFFIVMF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIA--LFENSMARLRLDITPRITWAGFGFA 297 +P G F L L++ ++ +VG+ + L +N R R+ I+ F A Sbjct: 243 VPIGFSSPF------LTLIVHLI--LVGLFYVGAILIDNFGPRFRI-----ISSLKFNSA 289 Query: 298 FLAFVSLLA 306 + F+SL++ Sbjct: 290 CILFISLIS 298 >UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=2 Tax=cellular organisms RepID=Q0W2B6_UNCMA Length = 313 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 5/300 (1%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLT 67 +Q+ + A++PL++G+ R +A + +R+G V Q Y D+ KL ++SV + WVF LT Sbjct: 11 LQSAFIVAISPLITGVIRKLKALMQSRKGASVFQPYFDLYKLFRKESVVSSNASWVFHLT 70 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 PYV + +L +PV++ S L +GDLI ++Y+ + RFF A+S LDTGS F +G+ Sbjct: 71 PYVCMAAVLVAVLMVPVISTTS-LSFMGDLIVVVYMLTMMRFFMALSALDTGSAFGGMGS 129 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALCACAFAT 186 SRE + + EP +LL ++ A +AG+T++ +I+ + L P L L A T Sbjct: 130 SREMTISAIAEPTMLLAIFTMALIAGTTSLGDISYQLSVNGLELIRPSLFLGFAALFIVT 189 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E ++P D EL EG + EYSG +M+ +K + L + VF+PWG Sbjct: 190 LAENARVPVDNPATHLELTMIHEGMILEYSGKQLALMELSSMVKLALFLTILANVFLPWG 249 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 + GL + LV +VK+++ IA E+ MA+LRL P + F A LA +S Sbjct: 250 IATSLAPAGLAIGLVALLVKILIMAGAIAYIESCMAKLRLFRLPNLLTVSFTLALLAVMS 309 >UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B458_SULD5 Length = 308 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 94/248 (37%), Positives = 140/248 (56%), Gaps = 6/248 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M Y L+Q L+ VAPL G++R RA+ +R GP + Q Y DI KLL R + Sbjct: 1 MDFFYLLMQLLLAIIVAPLFDGMSRKLRAKFQSRIGPNIFQTYYDIYKLLKRGRTQSHSV 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVV---TVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ R+ PY+M + LP+ S L D+ LLYL A+ RF F ++G+D Sbjct: 61 SYISRIAPYMMFISAAAMFCVLPITYGRDATSSLMPFSDIFILLYLAALFRFTFIVAGID 120 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 + +PF+ + ASRE +G E + ++ L V AGSTN+++I + + +IP Sbjct: 121 SANPFSGVSASREGTMGFYTEEVAVICLIVVMMGAGSTNLASIVNMIQSGVYGYNIP-SF 179 Query: 178 ALCACAF--ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 ++ A AF ++E G+ P+DLAEAEQELQEG L E+ G F ++ I LKQ+ VL F Sbjct: 180 SIAATAFLWVMYVETGRKPYDLAEAEQELQEGVLGEFCGKDFAIIDMAILLKQMSVLGFF 239 Query: 236 VGVFIPWG 243 + +F+PWG Sbjct: 240 IVIFMPWG 247 >UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL7_THEPD Length = 312 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 163/290 (56%), Gaps = 13/290 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVG-PDA 59 + +L ++Q + L +APL GI R ARL R+GP V+Q YRD++KL + + P+ Sbjct: 4 LQILVGVVQGVCLVLLAPLAYGIQRKIIARLQLRKGPPVIQPYRDLLKLWSKDKLSVPEV 63 Query: 60 SGWVFRLTPYVMVGVMLTIATALPV-VTVGSPLPQLGDLITLLYLFAIARFFFAISGLDT 118 S W++ TP + + + + IA ++PV V +G PL D+ L+Y A+ARF +I+ LDT Sbjct: 64 SSWIYMATPLLYLAITVVIAMSIPVFVNMGIPL---ADIFLLIYSLALARFVLSIASLDT 120 Query: 119 GSPFTAIGASREAMLGVLVE-PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP--- 174 GSP A GA RE V++E PML L A + S+ + ++ T W + P Sbjct: 121 GSPLAAAGAWRENAAAVVIEVPMLFAALLPALEGGSSSLYAVVSHTCLRWETFIARPSYI 180 Query: 175 -LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 LA C A E G LPFD+AEAEQE+QEG L EYSG +M+ + +K+ V+ Sbjct: 181 VAALAFFVCMLA---EAGVLPFDVAEAEQEIQEGLLQEYSGRQLALMQLSMMVKRAVLFT 237 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 +FV +F+P+G T G+L+ + ++KL+ V + AL AR ++ Sbjct: 238 LFVDIFLPYGVALTLEPLGILVGVASYLIKLLALVTIAALVIAGNARYKV 287 >UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 n=11 Tax=Bacteria RepID=Q07T25_RHOP5 Length = 319 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 158/287 (55%), Gaps = 10/287 (3%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 Q L++F +APLL+G R +ARL R+GP +LQ YRD+++LL +++V D + W+FR TP Sbjct: 14 QMLLVFMLAPLLTGFVRKVKARLTRRQGPSLLQPYRDLLRLLRKEAVLADNASWLFRTTP 73 Query: 69 YVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 Y+ + A +P G DLI ++ L ARFF A++G+D G+ F IG+S Sbjct: 74 YLTFAAIWVAAALVPTFATGLLFNWTADLIVIVALLGTARFFLALAGMDIGTAFGGIGSS 133 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 RE M+ L EP +LL ++ A VAGST +S + + + + + L LA+ A Sbjct: 134 REVMIAALAEPAMLLIVFGVALVAGSTQLSTVANFIASSQVGLRVSLGLAMIALVMVALA 193 Query: 189 EMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 E ++P D EL E + EYSG ++++G LK L+ + + +F PWG Sbjct: 194 ENARIPVDNPSTHLELTMVHEAMILEYSGRHLAMIEFGAFLKLLLYVSLIGCLFFPWG-- 251 Query: 246 ETFTAGGLLLALVIA----IVKLVVGVLVIALFENSMARLRLDITPR 288 AG L+ V+ ++K+ V ++ALFE + A++R+ P+ Sbjct: 252 -IAIAGDAPLSYVVGAGLYLLKVTVAGFLLALFETATAKMRVFRVPQ 297 >UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=3 Tax=Bacteria RepID=B1ZSE4_OPITP Length = 314 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 106/300 (35%), Positives = 157/300 (52%), Gaps = 6/300 (2%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 Q +L +APL+SG+ + +A+L NRRGP V Q Y D++K L + V + W+F +TP Sbjct: 11 QTALLLGLAPLVSGVIKNWKAKLQNRRGPRVWQPYLDLLKFLRKDMVVSEHVSWIFGVTP 70 Query: 69 YVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 V++ L +P++TV +P+ GD + L+ L A+ RF A+SGLD S F +G+S Sbjct: 71 VVLLLTALAAGLLVPMITVQAPMDLFGDALALVGLLALGRFCLALSGLDPASTFGGMGSS 130 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV--YHWPLSQSIPLVLALCACAFAT 186 RE + + EP ++L ++ A AGSTN+S+I + W LA A Sbjct: 131 REMTISAVAEPAMMLAIFAVALTAGSTNLSHIVQASEGFGWNFLDPAH-ALAFAAMFVVL 189 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E G++P D EL E L EYSG +++W +S+KQLV++ + +F P G Sbjct: 190 LAETGRIPVDNPATHLELTMIHEAMLLEYSGRHLALIEWAVSVKQLVLMALLANIFFPLG 249 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 T L L L VKL++ I L E + A+LRL P + F A LA VS Sbjct: 250 LAGEATPAALALGLGFFAVKLLLLAGAIVLVEFTNAKLRLFRVPDLLSTAFILATLALVS 309 >UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteobacteria RepID=Q2WAW1_MAGSA Length = 315 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 158/289 (54%), Gaps = 10/289 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L+ L+Q +++ A++PL++G R+ ++RL+ R G Q YRDI +LL +++V ++ Sbjct: 3 AILWQLLQIVLVVAISPLITGWVRLVKSRLNGRIGASPFQPYRDIYRLLQKEAVVAHSAS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVFR+ PYV G A +P T L Q DLI L+ L +ARF+ A++G+D G+ Sbjct: 63 WVFRVAPYVTFGAAWLAACIVPAFTTNLFLAQAADLIALVALLGVARFWTALAGMDVGTS 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F +GASRE M+ L EP +L+ + + ++G+T + I V + + L LAL A Sbjct: 123 FGGLGASREMMISSLAEPAMLMVTFSLSLISGTTAPAQIIAFVLSGGVGIEVSLGLALAA 182 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E G++P D EL E + EYSG +M+ ++ + + + G+ Sbjct: 183 LVMVAIAENGRIPIDNPATHLELTMVHEAMVLEYSGRHLALMEGAGMVRLTLFMALIGGL 242 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIA----LFENSMARLRL 283 F PWG + GG +A+++ + + V+A +FE S+A++R+ Sbjct: 243 FAPWGMAQP---GGDAVAVLVGLAAFLAKCFVLATALGVFETSIAKMRV 288 >UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ8_THEYD Length = 304 Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 90/279 (32%), Positives = 155/279 (55%), Gaps = 10/279 (3%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 ++ L++ ++P G TR RA + +R GP LQ Y DIIKL+G++ + + +FRL Sbjct: 11 IVNILIVLILSPFFDGFTRKVRALIQSRIGPPPLQSYYDIIKLMGKEDLKSTINP-LFRL 69 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 +PY+ + + + +P+ + PL GD+ +Y+ + I+ + +PF IG Sbjct: 70 SPYLSIISIGMASLLIPITELTPPLNFWGDIFLFIYIITVVGIAIIITASASENPFAYIG 129 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 ASR+ ML + VEP+L + L A AGS I +I ++++ ++ ++L+ C F + Sbjct: 130 ASRKMMLHLSVEPILAIALITGAINAGSFKIGDI--VLWYYSNGPNVSMLLS-TVCVFLS 186 Query: 187 FIEM-GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 + GK+PFD++EAEQE+ EG L E SG + +KW +Q++ +F +F+PW + Sbjct: 187 LQALIGKIPFDISEAEQEIAEGVLIELSGPKYACVKWANMSRQVLFCLVFTQIFVPWPFL 246 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 E LL ++IA+VK+ + + L E RLR+D Sbjct: 247 E-----NDLLNILIALVKVTAIIFISTLIEALNPRLRID 280 >UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Tax=Thermococcus RepID=C5A3D5_THEGJ Length = 305 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 112/310 (36%), Positives = 169/310 (54%), Gaps = 22/310 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + V + L+ L++F + P L GI R +ARL RRGP ++Q + D+ KL SV P S Sbjct: 5 IKVGFELVGILIIFLLPPYLDGIARRVKARLQYRRGPPLMQTWYDLQKLFNLPSVKPTKS 64 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLP-QLG-DLITLLYLFAIARFFFAISGLDT 118 +F P++ + ++ A LP G+ +P G +L+ Y+ + F + GL Sbjct: 65 -LLFTAAPFLALASAISAALLLPY---GNVIPVDFGFNLVVFFYVILMVSVFLILGGLSV 120 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLA 178 + F+ IGA+REA L + VEP++ + V A AGS NI++I ++ P LVLA Sbjct: 121 QNAFSHIGATREAQLILTVEPLIAILYGVLAYNAGSLNIADIIANLHLTP-----SLVLA 175 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 A A+A ++E G +PFD+AEAEQE+ GPL EYSG GV + I +K+ +L FV + Sbjct: 176 YIALAYALYVESGFVPFDVAEAEQEVIGGPLGEYSGRLLGVFYYAIHIKRFALLWFFVSL 235 Query: 239 F-IPW-GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD----ITPRITWA 292 +PW G + T L+LAL + V +IA E + ARLR+D + R+ +A Sbjct: 236 LTMPWIGPINTPERAALVLAL--QFILTVAFYPIIAALEATNARLRIDQVVKMNVRMFFA 293 Query: 293 G---FGFAFL 299 G G AF+ Sbjct: 294 GLVILGMAFM 303 >UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Actinomycetales RepID=A0QMU2_MYCA1 Length = 319 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/304 (34%), Positives = 154/304 (50%), Gaps = 15/304 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS + Q L + A APL+ G R RARL R G GVLQ +RD+ K LG+Q + P + Sbjct: 4 MSYVAGAAQILAVMAGAPLVIGAMRQVRARLEGRGGGGVLQPWRDLRKQLGKQQISPQGT 63 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 VF P ++ G L I P+V GSPL DL ++ L + ++G+DTG+ Sbjct: 64 TVVFAAAPAIVAGTTLLIVAIAPIVATGSPLDAAADLFAVVGLLFLGTVALTLAGIDTGT 123 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN-ITDTVYHWPLSQSIPLVLAL 179 F +GASRE + LVEP +LL ++ + AGS N+ +T+T+ H S+ +LA Sbjct: 124 SFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVTNTIDHPGQVVSLTGLLAF 183 Query: 180 CACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E G+LP D EL E + EY+G +++W ++ V+L + Sbjct: 184 VALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLALVEWASGMRLTVLLALLA 243 Query: 237 GVFIPWGQMETFTAGGLLLALVIAI----VKLVVGVLVIAL--FENSMARLRLDITPRIT 290 +F+PWG AGG A+ +AI + V VL +AL E +A+LRL P + Sbjct: 244 NLFLPWG-----IAGGHPSAVDVAIGLAAITAKVTVLAVALAGAEVFIAKLRLFRVPELL 298 Query: 291 WAGF 294 F Sbjct: 299 AGSF 302 >UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM3_RHORT Length = 300 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 134/243 (55%), Gaps = 10/243 (4%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG---WV 63 + L++ APLL G+ R +AR+H+R+GP +LQ Y D+ KLL ++ D G + Sbjct: 8 IFNVLLVVCAAPLLDGVLRQVKARIHSRQGPPILQTYFDLAKLLVKE----DQRGVNQLL 63 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 F P V + ++ A +P+ + SPL GD I LY+ +A + G+ +GSP+ Sbjct: 64 FAWAPVVCMASVILSALFVPMAGL-SPLGFSGDAIVFLYVLTMAPLCMCLGGMASGSPYA 122 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 GA+RE M + VEP++ + L + A S N+++ + + + ++ +++A A Sbjct: 123 YAGANREIMTLMAVEPVVAICLITSGIRAHSLNLADCVNA--YAAGAPALSMIIATIAFF 180 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E+ K+PFD AEAE E+ EGPL EYSG + KW KQ+V++ +FV F+PW Sbjct: 181 LILPAELSKVPFDQAEAETEIMEGPLIEYSGRKLALFKWSFYAKQIVLITLFVEWFLPWP 240 Query: 244 QME 246 M Sbjct: 241 HMN 243 >UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alphaproteobacteria RepID=B6IT65_RHOCS Length = 323 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 138/246 (56%), Gaps = 3/246 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 ++VL+ +Q LV+ A+APLL+G+ R +ARL RRGP VLQ YR +++L +++V + + Sbjct: 10 LAVLFQCVQMLVVLALAPLLTGVVRGIKARLQGRRGPPVLQPYRALLRLTRKEAVVAENA 69 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+FR TPY++ ++ A +P T L + DLI L+ L ARFF ++ +D G+ Sbjct: 70 SWLFRATPYIVFTMLWLAAGLVPTFTTALALAPVADLIALVALLTTARFFTGLAAMDIGT 129 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F +GASREAM+ L EP +L ++ A + +T+++ I D + + L L L Sbjct: 130 AFGGLGASREAMISALAEPAMLAVIFTLAILLQTTSLAAIVDGTLGQGVGLRVSLALGLI 189 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + E G++P D EL E + EYSG +M+ L+ L+ + + + Sbjct: 190 SLIMVAIAEAGRIPVDNPATHLELTMVHEAMVLEYSGRHLALMEAAGMLRLLLFMALILC 249 Query: 238 VFIPWG 243 VF+PWG Sbjct: 250 VFVPWG 255 >UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n=3 Tax=Aquificales RepID=B2V8R5_SULSY Length = 311 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 148/292 (50%), Gaps = 4/292 (1%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L+Q ++L A++P + + L ++GP + Q Y+DI +L ++ V + ++ R+ Sbjct: 8 LLQFVILVAISPFIKTFIHKIKCILRGQKGPPLTQAYKDIYRLFKKEVVISKDASFISRM 67 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 PYV+ L AT LPV+ + L GD+I L Y+ A+ FF A+ G+D S F +G Sbjct: 68 APYVVFVSTLWAATFLPVINKYTLLNFTGDIIALAYILALGVFFIALYGMDQASAFGGLG 127 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ-SIPLVLALCACAFA 185 +SRE + L E +L ++ A GSTNI I + V+ + +S + + AL + Sbjct: 128 SSREITIAALSEASFMLIIFTFALQTGSTNIGEIFEKVHQFGISHVPVSVAFALISLLIV 187 Query: 186 TFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 + E ++PFD E EL E + E SG + + +K + L + +F P Sbjct: 188 SLAENARIPFDNPETHLELTMVHEAMILEASGRHLALFELSSYIKLTIFLTLASNLFFPL 247 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G + + ++L +V+ I+K+++ + +AL E SMA+ R P I F Sbjct: 248 GFYKDTSILFIILGVVVYILKMLLFAVPVALIEMSMAKFRFFRVPEILTLAF 299 >UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN3_PYRAB Length = 299 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 131/232 (56%), Gaps = 12/232 (5%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYV 70 +VLF + P L GI R +AR+ +RRGP ++Q + D++KLL SV P W+F+L PY+ Sbjct: 11 IVLF-LPPYLDGIARKVKARIQHRRGPPLMQTWYDLVKLLSIPSVIPT-RNWLFKLYPYL 68 Query: 71 MVGVMLTIATALPVVTVGSPLP-QLG-DLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 + A LP G +P +LG +LI Y + F ++G + F+ +G++ Sbjct: 69 AFASAIVAALLLP---YGGVIPLKLGYNLIVFFYAILMVSVFLMLAGFSVQNAFSHLGSA 125 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 RE ML + VEP+L + + A AGS +I I ++ P L++A A++ ++ Sbjct: 126 REMMLILTVEPLLAIVYGILAYNAGSLDIGEIISNLHLTP-----SLIVAYAILAYSMYV 180 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 E G +PFD+AEAE E+ GPL+EYSG G+ + I +K+ +L FV + + Sbjct: 181 ESGFVPFDVAEAETEVIGGPLAEYSGRLLGIFYYAIHIKRFALLWFFVSLVV 232 >UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Clostridium RepID=B8I2P8_CLOCE Length = 312 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 22/299 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S+L + Q + L +APL +GI R ++++ ++ G + Q Y D+IKLL + V S Sbjct: 4 SILKFIFQMIFLLLIAPLFTGIIRKIKSKIQHKIGASIFQPYYDLIKLLKKDLVVSSTSS 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W++ + PYV L A LP++ DL+ ++YL R F A++GLDTGS Sbjct: 64 WIYTVAPYVYFITSLAAAMCLPIIYQFKGFSFYTDLLVIVYLLVAGRIFMALAGLDTGST 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAA---QVAGSTNISNITDTVYHWPLSQSIPL--- 175 F +G+SRE ++ LVEP L L + +VA ++ S +Y + + +SI Sbjct: 124 FGGMGSSRELLVSALVEPALFLIIITVGANPEVASTSVFS-----IYEYAVKESIGAFST 178 Query: 176 --VLALCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLV 230 +L A E ++P D EL E EYSG ++ G +KQLV Sbjct: 179 VNILLFVAMLMVMIAESSRIPVDDPSTHLELTMVHEAMTLEYSGRHLAFIEMGSYIKQLV 238 Query: 231 VLQMFVGVFIPWG-QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 + + IP G ME AG L I ++KL+V + A+ E + + RL P Sbjct: 239 FMTFMANILIPVGLNMENILAG-----LSIYLLKLLVITFLAAIIEINTVKFRLFSLPN 292 >UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoides RepID=D2BJQ0_DEHSV Length = 316 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 9/303 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VLY I + V+PL + + +A R GP +LQ Y + KL ++ V + + Sbjct: 9 VLYGFINTALALLVSPLFISLIKKVKAYAQGRVGPPLLQTYYQLYKLFKKERVYSYQTSF 68 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + RLTPY+ + M+ + ++P+V + + P LG++I LYL ++RFF A+SGLD GS F Sbjct: 69 IIRLTPYLSLAFMMVASLSVPLVFIPAADPGLGNIILFLYLMVMSRFFMALSGLDAGSSF 128 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE L ++EP++++ A V +T++ ++ V + L+L + Sbjct: 129 GGMGSSREMTLAAIIEPVIIIVFGALAYVLQTTSLFDMFAQVRKSSFLSNPSLILTGISL 188 Query: 183 AFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 +E ++P D E EL E EYSG +++ +LKQ +++ + + + Sbjct: 189 FIILIVETSRIPVDNPETHLELTMIHEAMTLEYSGPDLALIELSHALKQTLLMGVLLNII 248 Query: 240 IPWGQMETFTAGGLLLALVIAIVK---LVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 PWG AGG+ +A + ++K L VGV +FE+ MA+ RL P + F F Sbjct: 249 APWGLASAPAAGGIAVAFLAFVIKGSLLAVGV---GIFESLMAKFRLFRVPGLFMLAFFF 305 Query: 297 AFL 299 +F+ Sbjct: 306 SFI 308 >UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR4_PELPD Length = 303 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 157/288 (54%), Gaps = 18/288 (6%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L+ +++ A+APL G+ R AR+ +R+GP + Q Y DI+KLLG+ + + + R Sbjct: 8 LVNVILVLALAPLFQGVLRKVTARIQSRQGPPINQPYLDILKLLGKDDIESGEAPVLQRF 67 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 Y+ + VMLTIA +P + +PL GD++ L+ L +A ++GL +GS ++ IG Sbjct: 68 AAYLPLAVMLTIACLVP-MGFKAPLSGSGDVLLLILLMTLAGICTLLAGLASGSTYSLIG 126 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI-TDTVY---HWPLSQSIPLVLALCAC 182 +RE M + +EP+ + + + A GS N+ + + +VY LS LV+ L Sbjct: 127 INREMMCMITLEPLFAVAIVMGALAKGSFNLDEVLSGSVYGANGMALSGFAMLVIML--L 184 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 AF F+ G+ PFD++EAE E+ EG + EYSG + ++ K +V +FV +F+PW Sbjct: 185 AFQAFV--GRAPFDISEAETEIMEGAMVEYSGPKLALFQYANMAKLVVYSALFVSLFVPW 242 Query: 243 GQMETFTAGGLL--LALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 G GL ++ ++ VK+ VL++ + AR R+D R Sbjct: 243 GS-------GLAAPISFILFWVKVFAMVLLVTTIAATHARYRIDQAIR 283 >UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT75_THEON Length = 300 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 153/285 (53%), Gaps = 30/285 (10%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYV 70 +VLF + P L GI R +AR+ RRGP ++Q + D+ KLL SV P G +FRL PY+ Sbjct: 11 IVLFLLPPFLDGIGRRIKARIQYRRGPPIMQTFYDLEKLLKLPSVLPT-EGPIFRLAPYI 69 Query: 71 MV------GVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 + G+ML + PV+ G LI Y+ A+ ++ + F+ Sbjct: 70 ALASAIAGGLMLPFGSE-PVLAFGK------SLIVFFYVMAMVSVVMILAAFSVQNAFSH 122 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC-- 182 IG RE ML + +EP+L + V A G+ N++ + P S ++ L +AL Sbjct: 123 IGGHREVMLILSIEPVLAVVFGVLAFKLGTLNVAEM-------PFSANLSLSVALAYILL 175 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A+A ++E G +PFD+AEAE E+ GPL+EYSG GV K+ + +K++V+L + + + Sbjct: 176 AYAVYVEGGFVPFDIAEAETEVIGGPLTEYSGRLLGVFKYALLVKRVVLLWLLASMIV-- 233 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIAL---FENSMARLRLD 284 + + G+ ++ + + +LVV L+ +L E + ARLR+D Sbjct: 234 --IPAMRSLGITSSMALLVAQLVVTFLLYSLAVAVEAANARLRID 276 >UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteobacteria RepID=Q3JMD4_BURP1 Length = 975 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 6/281 (2%) Query: 28 RARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTV 87 RA L NRR P + Q YR + KL ++SV + + +FR PYV+ M +P ++ Sbjct: 691 RAWLQNRRAPSIWQPYRMLHKLFNKESVVAEHASPLFRGAPYVVWAAMALACAIVPTLST 750 Query: 88 GSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 P D I L+ LFA+AR +++ +D G+ F +GA RE ++G L EP LL+ L+ Sbjct: 751 ELPFSPAADAIALVGLFALARVALSLAAMDIGTAFGTLGARREMLIGFLAEPALLMVLFS 810 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQEL--- 204 A+ + ST +++I + H L+ L A A + E +LP D EL Sbjct: 811 ASLITRSTLLTSIVAALGHRELAIYPSLAFAGIAFTLVSLAENARLPVDNPATHLELTMI 870 Query: 205 QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKL 264 E + EYSG +M+W SLK + + +F+PWG E + LLLAL VKL Sbjct: 871 HEALILEYSGRHLALMEWAASLKLFAYSCIGLALFMPWGIAEAGSPLALLLALPALFVKL 930 Query: 265 VVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 +VG +A+ E + A++RL P + F LA + +L Sbjct: 931 LVGGAALAVVETTNAKMRLFRVPEFLASAF---LLAVIGML 968 >UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL1_THELI Length = 293 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 17/223 (7%) Query: 18 PLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLT 77 PLL G+ R +A + NR GP +LQ + DII LL S+ P +S FRL PYV + L Sbjct: 14 PLLDGVARKVKAMIQNRVGPPILQTWYDIITLLSMDSILPTSS-LTFRLAPYVALASALC 72 Query: 78 IATALP-----VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAM 132 +A LP ++ G GDLI +Y+F + L + ++ GA+RE Sbjct: 73 MALMLPYGSDAIINFG------GDLIAFIYVFTLFSAALVFGALSVDNSYSHAGANRELT 126 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 L ++ +P+ + + A GS +I+ I ++ S S ++ A + T++E G Sbjct: 127 LSLVFKPLFAITIGTFALKTGSLSITEIARSI-----SPSPSIIGAYLLLLYVTYVESGF 181 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 +P+D+AEAE E+ EGPL+EYSG G+ KW + +K+ ++ +F Sbjct: 182 IPYDIAEAETEILEGPLTEYSGRLLGLFKWALQIKRFAMIWLF 224 >UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 n=3 Tax=Thermococcus RepID=B6YWP7_THEON Length = 293 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 17/289 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+ +Y + + + APLL GI R +ARL +R+GP ++Q + D++KL R +V P S Sbjct: 1 MNAVYAALNLIFIVLFAPLLDGIERKVKARLQSRQGPPLIQTWLDLLKLFRRPNVRPRES 60 Query: 61 -GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 W+F P + + +L + +P + GS L GD+I +YL ++ A+ TG Sbjct: 61 VRWLFEPAPAIALVSVLAASLFIPSLLPGS-LDTWGDIIAFIYLSTLSAVAIALGAFSTG 119 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 SP+ IG+ RE + +++ L VAA A S +S +PL + + Sbjct: 120 SPYAQIGSHRE--VSIIMAEEFSLAFIVAALAASSGGLS----FSRLFPLQLKVSTITGA 173 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A A ++ ++PFD+AEAE E+ EGP E+SG G G++K I +K+L++ + + F Sbjct: 174 LAFAVMAYVAGARIPFDVAEAEPEIVEGPFIEFSGKGLGMLKLSIYVKRLLLTTILLNFF 233 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +P Q T + +++ ++ LV+ +V A E R R R Sbjct: 234 LP--QDGT-------VRVLVYVIGLVIISVVYASIEAHYGRFRTKDAAR 273 >UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM8_9BACT Length = 322 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 152/299 (50%), Gaps = 4/299 (1%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L A VLF +APLL G RA L NR G+LQ +R++++L ++ + P+ +F Sbjct: 18 LQMAFVLF-LAPLLYGWIGTVRAILQNRSPAGILQPWRNLVRLFRKEMILPEGHSPLFLA 76 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P + +M A +P + PL + D +TL+ LF++ARF A++ +D G+PF +G Sbjct: 77 VPPLFFSIMAVAALLVPFLGTSPPLAPVADAVTLVGLFSLARFSMAMAAMDLGTPFGDMG 136 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 RE M+ L EP L+ L+ + +GST+I +I + PL L++A A Sbjct: 137 GRREMMVAFLTEPATLMILFTVSLWSGSTSIPSILTSFSKGPLPFHPSLLIAAMAFILVF 196 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E +LP D EL E L EYSG +M+WG K L+ L + + F P G Sbjct: 197 LGENARLPIDNPSTHLELTMIHEAMLLEYSGPLLALMEWGSMQKLLLYLLLGIDFFAPAG 256 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 TF GLL ++ + KL + ++AL E+ A+LR+ P T + + L F+ Sbjct: 257 IPRTFALSGLLEGGILLLGKLFILGALLALIESLFAKLRIFRVPEFTALAYLLSTLGFL 315 >UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Methanomicrobia RepID=Q2FKS6_METHJ Length = 313 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 152/303 (50%), Gaps = 7/303 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S ++ + + ++P + + +AR+ R+GP +LQ Y ++ KL ++++ + +G Sbjct: 5 SFIFAFLNVAFVLVISPFFMMVIKKVKARVQGRQGPHLLQGYYNLAKLFRKETLYSEYAG 64 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ R+ PY + ++L A +P+ + ++I LYL R A+ GLD S Sbjct: 65 FISRIAPYAALSILLVAAVMVPIFWIPEQELVTANIIVFLYLLVTGRLLIALLGLDAAST 124 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT-VYHWPLSQSIPLVLALC 180 F +G+SRE L ++EP+ ++ V GS +I +I T +P P VL L Sbjct: 125 FGGMGSSREMSLSAIIEPVTVVVFAALVYVTGSFSIHDIFRTATTMFPAYN--PTVLLLS 182 Query: 181 ACAFATFI-EMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 F I E G++P D E EL EG L + SG + + ++KQ +++ + + Sbjct: 183 VPLFILIIVETGRVPVDNPETHLELTMVHEGMLLDTSGRNLALFELSHAVKQTLLMAILL 242 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 + +P G +AG L+L V+ ++K V ++I LFE++ A++R P + F F Sbjct: 243 NIILPAGIALEMSAGVLILGGVLFLLKGTVLCVIIGLFESAYAKMRFFQIPNLFMIAFFF 302 Query: 297 AFL 299 + L Sbjct: 303 SIL 305 >UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=2 Tax=Thermococcus RepID=B6YTW7_THEON Length = 307 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 151/279 (54%), Gaps = 16/279 (5%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPY 69 +++ + PLL GI+R +A + R+GP V Q Y D+ LL + + P D G F + PY Sbjct: 14 MIIILLPPLLDGISRKIKATVQERQGPPVFQTYYDLSSLLSMEPILPTDRLG--FLIAPY 71 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 V ++ A LP P+ GD+ LY+ AI ++G + ++ GA+R Sbjct: 72 VAFASAVSAALLLPFGNF-VPVAFTGDIFVFLYVLAIFSISMMMAGFLVNNTYSNAGANR 130 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI--PLVLALCACAFATF 187 E ML + VEP+L + + + A S ++S I PL+ S+ +VLA A+A + Sbjct: 131 EMMLILSVEPILGIAIGILALKTHSLSVSGI-------PLNLSLTPSVVLAFIFLAYAVY 183 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG-VFIP--WGQ 244 E +PFD+AEAE E+ EGPL EYSG G+ KW + +K++ ++ +F + IP G Sbjct: 184 TECAFIPFDIAEAETEILEGPLVEYSGKLLGIFKWAMLIKRVALIWLFASFIVIPVMKGF 243 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 ++ T G + L +V LVV ++ A+ E++ AR+++ Sbjct: 244 VDITTPYGGAVTLAAQLVLLVVFYVMSAIIESTTARMKV 282 >UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) n=2 Tax=Leptospirillum sp. Group II RepID=A3ETD7_9BACT Length = 320 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 5/301 (1%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L + +++ +APL +G + +A L NR PG+ Q RD KLL ++++ P+ S +FR Sbjct: 15 LFRMILVLVLAPLFTGWIGMVKALLQNRTPPGLFQPLRDWSKLLSKETIVPEGSSALFRW 74 Query: 67 TP-YVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 TP V ++++ + T G P+ +GD + L + A R A+ DTG+PF + Sbjct: 75 TPPAVFSLLLVSSLLVPVLATGGKPI-VIGDALVLTGIMAFVRVLMALGAFDTGTPFGHL 133 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G RE M+G L EP +L ++ + +GST D + L + LV A Sbjct: 134 GGRREMMVGFLAEPATILVIFTTSLFSGSTMTYQTADALRSGSLLPTPSLVFGALAFLLI 193 Query: 186 TFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 E ++P D EL E L EY+G +M+WG ++K +V + + +G+F PW Sbjct: 194 LLGENARIPIDNPATHLELTMIHEAMLLEYAGPPLALMEWGSAIKLVVYVLLGIGLFFPW 253 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G T L A V ++KL+ LV+ + E MA+LR+ P F A L F+ Sbjct: 254 GLSGTEGPEALASAGVFLLLKLLAAGLVLGILEALMAKLRIFRVPEFMTLAFLLAILGFL 313 Query: 303 S 303 S Sbjct: 314 S 314 >UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfitobacterium RepID=Q24ST5_DESHY Length = 328 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 4/223 (1%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + + ++ L+ APLL G + +A R+GP + Q YRD+ K + ++ V + + W Sbjct: 12 IFFSMLHLLIFLLAAPLLQGWIKKVKAFWQMRQGPSLFQPYRDLWKYMRKEEVVSEHASW 71 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +F +TP +++G + +P +P+ +G L L +ARFF A++GLD G F Sbjct: 72 IFLVTPSLVLGSTILAGCVVPGPWGWAPIHSMGSLFWLAASLGLARFFLALAGLDAGGTF 131 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE + LVEP +L L V A + +T++ I+ + + ++ P +LAL A Sbjct: 132 GGMGSSREVFVAALVEPGFILSLVVLALMTETTSLMGISAALQGLSIFET-PRILALFAL 190 Query: 183 AFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKW 222 E+G++P D + EL EG L +YSG G + W Sbjct: 191 FVIVIAELGRIPIDNPDTHLELTMIHEGMLLDYSGPSLGFLTW 233 >UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit HyfD n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E4_9EURY Length = 319 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 13/286 (4%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L+Q L + A++PL+ GI + A+ +R+G + Q Y D+ K ++ V P+ +G +F L Sbjct: 9 LVQVLTVLALSPLMVGILKKWEAKFESRKGISIFQPYYDLAKSFKKEIVVPEDAGSLFIL 68 Query: 67 TPYVMVGVMLTIATALPVVTVGSP--LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 P + L + +P+V GSP L D + +LF A FF I TGS +T Sbjct: 69 APMLSFTAYLILPWVVPIV-FGSPSWFAPLVDFLGGAFLFGFASFFSVIGTEKTGSYYTG 127 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH---WPLSQSIPLVLALCA 181 IGA+R G EP+L+ + A + G+ N +T+ + W LS + +L + A Sbjct: 128 IGATRGVTFGAFAEPVLITVFFGVALITGTNNPFLTNETLRNNLSWMLSPT--HILLITA 185 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 + GKLP + + EL +G EYSG + + WG +KQ ++ +F+ V Sbjct: 186 FFLLLLFDTGKLPIE-SHGMGELGMIGQGMGLEYSGPLYALKSWGSYMKQFILFSVFINV 244 Query: 239 F-IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 F +PW A +L + + VK++V + I L E S+A++RL Sbjct: 245 FAMPWFIPLQVNALTILYGIALLFVKMLVVIFAIVLVEISVAKIRL 290 >UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU4_ACIC1 Length = 320 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 16/292 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VL ++Q + AP LSG ARL RRGP +LQ Y DI+K ++S+ P + W Sbjct: 8 VLLQVLQVGTVALAAPGLSGFIARLEARLQGRRGPRILQPYYDIVKFFRKESLAPLEASW 67 Query: 63 VFRLTPYVMVGVMLTIATALPVVT-VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F P+V LTI +PV+T G PL +GD++ +L A+A F A++ +TGSP Sbjct: 68 IFLAAPFVAFVCYLTIPLLIPVLTSYGLPLGYMGDILGGGFLLALASFAVALAAAETGSP 127 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + +G+SR G + EP++L ++ A + + + TV P L A Sbjct: 128 YAQLGSSRSKTFGAITEPVVLFVVFTVALLTSTDLPYALAATVRQSAGQIVRPAHLLAAA 187 Query: 182 CAFATFI-EMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 F + E G++P + E ++E E+SG +++WG ++KQ ++ +F+ Sbjct: 188 AFFLVILYETGRIPIETHSGTNEFGMIEEARSFEHSGPYLAMLRWGAAMKQFILYIIFLN 247 Query: 238 VFI-PWGQMETFTAGGLLLALVIAIVKL-----VVGVLVIALFENSMARLRL 283 VF+ PWG + G L A+++A++ L +VGV V A+ ++S A+LRL Sbjct: 248 VFVAPWG----LASDGSLAAVILAVLALLGKAALVGVGV-AVIDDSFAKLRL 294 >UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4 Tax=Proteobacteria RepID=A5FW44_ACICJ Length = 317 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 7/274 (2%) Query: 15 AVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGV 74 A AP + G R+ GPGVLQ YRD+ KL + V P+ + W+F +TP V Sbjct: 18 AAAPFIQGCIVQFEERIQRGHGPGVLQPYRDLWKLFHKDIVVPETASWLFWVTPVVAFTC 77 Query: 75 MLTIATALPVVTVGSPLP--QLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAM 132 M+T+ +PV+T PLP +GD++ + + F ++GLDTGS + IG+SR A+ Sbjct: 78 MMTVPILIPVLT-NYPLPLSNMGDILGGGLILTLGSFMITLAGLDTGSAYGGIGSSRAAV 136 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATF-IEMG 191 +G+L EP L+L A S + + P P L L A F +E Sbjct: 137 IGILAEPTLILVFVGITLFARSMLPFVVNHLLVASPAVYLGPAHLFLVAAFFILLTVETD 196 Query: 192 KLPFDLAEAEQ--ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF-IPWGQMETF 248 +LP + + ++E + EY+G ++KW +KQ ++ +F V +PW Sbjct: 197 RLPIHSSTHIEVYMIEEARVLEYAGPLHALLKWASMMKQFILYTIFCNVLTMPWFLSTRG 256 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 A G+L + IVK V+ I + ARLR Sbjct: 257 LAPGVLGSAAGVIVKFVIVACAIVTVDTIQARLR 290 >UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n=5 Tax=Desulfovibrio RepID=B8DNI7_DESVM Length = 332 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 123/238 (51%), Gaps = 13/238 (5%) Query: 15 AVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVG 73 AV L G+ R ARL R GP ++Q Y DI KL +++V P A+ F L P + + Sbjct: 33 AVGLFLKGLDRRIEARLQRRVGPPLIQPYLDIAKLFTKETVMPASANRAAFLLAPLLGLT 92 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 M A LPV V LP +GDL+ + YL + + G + SPF A+G SRE L Sbjct: 93 GMAVCAALLPVPGVSGGLPAMGDLLVIFYLLPLPAIALMVGGSASSSPFGAMGFSREMTL 152 Query: 134 GVLVE-PMLLLGLWVAAQVAGST------NISNITDTVYHWPLSQ-SIPLVLALCACAFA 185 E P+L + L VA +V +T +++NI D Y Q ++ V+ A+ Sbjct: 153 MFAYEMPLLAVMLAVAMKVGMATGGGAEFSLANIVD--YQLANGQLALDPVMIPALLAYL 210 Query: 186 TFI--EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 F+ MG +PFD+ EAE E+ EGPL EYSG +LK +VVL + V +F+P Sbjct: 211 LFLPGTMGTVPFDVPEAETEIIEGPLLEYSGPALAFFHIASALKTVVVLGLGVALFLP 268 >UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Bacteria RepID=Q2RUH3_RHORT Length = 323 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 21/277 (7%) Query: 20 LSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTI 78 L G R ARL R G +LQ + D++KL+ ++++ P+ + V F + P + + M Sbjct: 31 LKGFDRRVFARLQRRVGAPLLQPFYDVLKLMTKRTLVPENANLVVFLMVPLLGLASMGVA 90 Query: 79 ATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVE 138 A +P+ + P P GDL+ L YL ++ ++G +GSPF IG SRE + + E Sbjct: 91 AAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGSASGSPFGGIGFSREMAIMLAYE 150 Query: 139 -PMLLLGLWVAAQVA---GSTNISNITDTVYHWPLSQSI-------PLVLALCACAFATF 187 P+LL+ + VA + G ++++ V + + P VL A A Sbjct: 151 GPILLVIVSVALKTGAALGQPICLSLSEIVRYQQAHGAYLFDPWMWPAVLTYIAFIPA-- 208 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET 247 +G PFD+ EAE E+ EGPL EYSG G++K ++K +VV+ + + +F P G Sbjct: 209 -NLGISPFDIPEAESEVLEGPLIEYSGVALGLLKLTSAVKSVVVIGLGIVLFFPNGP--- 264 Query: 248 FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 GL +V A+ LV+ V +++ ++ R+R+D Sbjct: 265 ---EGLFGLVVFALKCLVITVCGVSVLRAAVGRMRID 298 >UniRef50_C4KGS6 Formate hydrogenlyase subunit 4 (HycD) n=13 Tax=Archaea RepID=C4KGS6_SULIK Length = 324 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 121/237 (51%), Gaps = 15/237 (6%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVM 75 ++PL GI +A + R+GP VLQ Y DIIKLL +++V + S +F PY++ G+ Sbjct: 29 LSPLYQGIYDRGKAIIEGRKGPSVLQPYYDIIKLLRKETVISNNSLSLFVYAPYIVFGIY 88 Query: 76 LTIATALPVVTVGSPLPQL----GDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 L I+ +PVV P+P L D + LF++A F I+ L++GS F A+G SR Sbjct: 89 LLISFVIPVVY---PVPILLTPTVDFLGGALLFSLAAFIKIIASLESGSNFVALGVSRIL 145 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT--FIE 189 L E L+ + A + G+ N D V LS L + +F E Sbjct: 146 SFTFLSEATLITVFFGVALITGTNNPYVTLDYVSQ-SLSHYFQLDHIFVSISFFMLWLFE 204 Query: 190 MGKLPFD---LAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI-PW 242 GKLP + L+E + +G L EYSG ++KWG +KQ ++ + + VFI PW Sbjct: 205 TGKLPVESPGLSEMGM-IDDGVLYEYSGKLLAILKWGSYIKQYLLGSVLLNVFIFPW 260 >UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B2KDT5_ELUMP Length = 322 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 8/269 (2%) Query: 25 RVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV--FRLTPYVMVGVMLTIATAL 82 R A++ NR+GP Q D IKLL ++ V P V F++ P+V + ++T A + Sbjct: 35 RKLYAQMQNRQGPHWYQPVADFIKLLSKEVVVPSNVTMVKMFKVLPFVAISAIVTTALMV 94 Query: 83 PVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLL 142 P +V S + G+LI LYL I F + G + SP++AIG+ R E L+ Sbjct: 95 PFHSVESVINFQGNLIAALYLLTIPTITFFLVGWTSQSPYSAIGSMRVLTQLFAYEIPLM 154 Query: 143 LGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 + A +AGS NI++I PL + ++ L A ++ ++PFD+ AE Sbjct: 155 TAMLSPAILAGSWNIADIALFFSANPLLMFVN-IIGLFVSLIALQGKLERVPFDIPHAET 213 Query: 203 ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIV 262 E+ G +EYSG +G ++ I ++ +VV + VF+ AG V+ IV Sbjct: 214 EIVGGVFTEYSGRLYGFIQLAIDMEMVVVAALMNSVFLGGSLGLGGIAG-----FVLFIV 268 Query: 263 KLVVGVLVIALFENSMARLRLDITPRITW 291 K + V V++L ++ MAR+R++ W Sbjct: 269 KTLAIVFVLSLIKSLMARVRIEQMINFCW 297 >UniRef50_A6Q2X3 Ni-Fe hydrogenase, membrane subunit HycD/HyfD n=3 Tax=Epsilonproteobacteria RepID=A6Q2X3_NITSB Length = 306 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 19/308 (6%) Query: 7 LIQALVLFAV----APLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 +IQ L+ A APL + + L ++ +LQ Y+D KL+ ++ + + Sbjct: 1 MIQYLIFVATLIVTAPLFLTFMKAVKMWLLYKKPVSLLQGYKDFSKLIAKEVIISKEASS 60 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + + PY+++ ++ + LPV + S D T+ L ++ FF + GLD+ S F Sbjct: 61 ITSIAPYMVLAPLVLVLFFLPVPSSNSYYVGFVDAFTITGLITLSTFFLMLLGLDSASSF 120 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS----NITDTVYHWPLSQSIPLVLA 178 IG+SREA + LVEP ++L ++ + +A ++ N+ + H+P+ A Sbjct: 121 GGIGSSREAFISALVEPAMVLVIFSLSLIAKDLGVAKAALNLNN---HFPIKHLASFTFA 177 Query: 179 LCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 A E G++P D E EL E + + SG +++ SLK ++ +F Sbjct: 178 AIAFFILLLAENGRIPVDNPETHLELTMVHEAMILDISGFYLALIESASSLKFMIFATLF 237 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V F+P+G F L AL + ++K+ + +A E + A+LRL P + Sbjct: 238 VSFFLPFGANLPF-----LFALGLFLIKIAFVSVAVAFIEVNTAKLRLFKVPNLLGIAII 292 Query: 296 FAFLAFVS 303 FAFL+ +S Sbjct: 293 FAFLSLIS 300 >UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax=Thermococcaceae RepID=B6YU99_THEON Length = 330 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 21/310 (6%) Query: 2 SVLYPLIQALVLFAVAPLLS----GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 +++YP+ + L+A L S GI R AR+ R GP +LQ D KL ++++ P Sbjct: 6 NIIYPVAGLIGLYAFVSLASLVWEGIDRKLVARMQRRVGPPLLQPLYDFFKLASKETIIP 65 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 + + ++FR P + + + + P+ L GD+I +YL + FF + G+ Sbjct: 66 NTANFMFRAAPVLALATAIALLAYTPM-GFAPLLASKGDVIVFIYLLTLIGFFKILGGIS 124 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN-ITDTVYH----WPLSQS 172 +GSP+ IGA+REA + V EP ++L L+ G ++ + V++ W + Sbjct: 125 SGSPYAKIGAAREAAIMVSREPAMMLALFAIIWRLGKLGVNKPFSMEVFYQYNIWEIGTP 184 Query: 173 IPLV-----LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 + L+ L + A+ IE+G F++ +AE+E+ EG L+EYSG ++K +LK Sbjct: 185 LSLIGAVILLYVFVIWLASEIEVGY--FNIPDAEEEIAEGLLAEYSGRYLALLKLTKALK 242 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGL---LLALVIAIVKLVVGVLVI-ALFENSMARLRL 283 + + V +F PWG + F GL ++ L+ +K+ + + + ++F + RL++ Sbjct: 243 TYIAASLVVAIFFPWGIADYFNLTGLPANVVNLLFHTLKVFILLFAVQSVFRATTGRLKI 302 Query: 284 DITPRITWAG 293 W Sbjct: 303 TQAVDFLWKN 312 >UniRef50_A3DNE8 Hydrogenase-4 component C n=1 Tax=Staphylothermus marinus F1 RepID=A3DNE8_STAMF Length = 301 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 14/283 (4%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGP-GVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 I +V + PLL G+ R RARLH+R GP + Q + DI KLL ++ V D F + Sbjct: 10 ISFIVFLFIPPLLDGLERKIRARLHSRVGPPTIFQTWYDIRKLLAKEQVATDTFVNTFFI 69 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 + MLTI +P ++G LI + L A ++ + L G+PF+ IG Sbjct: 70 VSILFTTSMLTIP-LMPFGSIGIFSNSRNSLILFIILLASSQLLWVALSLSPGNPFSTIG 128 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 REA+L ++ E L+L + G T+ ++T+ Y S +L + + Sbjct: 129 VYREALLEMVNELFLILTGFGLMVYIGGTSFRDLTNINY------SAIYILFIVLLIVIS 182 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG-VFIPWGQM 245 ++ G++PFDLAEAE EL G L E+SG G++ + LK+ ++ + +P + Sbjct: 183 YVSSGRVPFDLAEAEPELASGVLIEFSGPILGIVLYTNFLKRAILCGFIANLILLPLKSL 242 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 L L++ + L+ ++ I L AR R+D+ PR Sbjct: 243 VNDIVLAALFYLLLFFIWLIYAIVSILL-----ARSRIDLAPR 280 >UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Euryarchaeota RepID=Q2FTW3_METHJ Length = 343 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 19/291 (6%) Query: 20 LSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTI 78 L GI R+ AR+ R+GP + Q + DI KLL + SV P +A +F P V +T+ Sbjct: 26 LMGIDRICAARMQMRQGPPLTQPFTDIRKLLCKDSVVPANAIPSLFNAAPIVAFASAVTV 85 Query: 79 ATALP---VVTVGSPLP---QLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAM 132 LP ++ VG+PLP + GDLI ++YL + G +GSP+ ++GA RE + Sbjct: 86 LFYLPLGSILPVGTPLPIIGEYGDLILIMYLLTVPALAMVAGGFASGSPYASVGAQREMV 145 Query: 133 LGVLVEPMLLLGLWVAA---QVAGSTNISNITDTVYHWPLSQSIP-----LVLALCACAF 184 + E L + + A VAG ++ H ++ P +L L A+ Sbjct: 146 TMIAYEFPLAIAIVAIAWRLAVAGLVMPFSVNTIAAHPIWTEVGPAGIIGCILLLIVLAW 205 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 T E+ ++P D EAE EL G L EYSG + ++ K + + + V +F PW Sbjct: 206 VTPAELSRIPCDTPEAETELCGGLLVEYSGRNLALFSLSMAAKLVAMAGLAVLLFFPWNL 265 Query: 245 METFTAGGLLLA---LVIAIVK-LVVGVLVIALFENSMARLRLDITPRITW 291 G++ A L+ ++K +VV ++L MAR R++ + W Sbjct: 266 SPVLGLSGIMGAGVDLLFFLLKVIVVMFFSVSLVRVVMARFRINTVVSLYW 316 >UniRef50_C6PUG6 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG6_9CLOT Length = 309 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 5/285 (1%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 +Q+++L V PL GI + +A L +G + Q Y D KL + + SG++ ++ Sbjct: 8 FLQSMLLIIVTPLFMGILKKFKAILRGYKGSSIFQVYYDYQKLFSKGRIRSSQSGFITQI 67 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P + + +T +P S LG L ++++ +I +F + GLD S F +G Sbjct: 68 GPILSLAAAITAVFMIPTF-FSSGETYLGSLFLIIFMMSIVKFLNTLIGLDCASTFGGMG 126 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 SRE L +L EP++ L + S NI I I +LA + Sbjct: 127 TSRELFLSMLAEPVMFLTIMFLYFENKSFNIFTICFNNSAGAF-YGIGHILAAISFFILL 185 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E +LP D E EL E + + SG+ ++ +K ++ L +F+ +F+P+G Sbjct: 186 LTENARLPIDNPETHLELTMIHEAMILDLSGTDLAFVEMASQIKLMIFLTIFINLFMPFG 245 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 T A +L A V+ VK++V + I++ E SM + RL P Sbjct: 246 AATTLGAVIILKAAVVFFVKILVILFGISIIEISMTKSRLFRVPE 290 >UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS25_9EURY Length = 329 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/313 (28%), Positives = 149/313 (47%), Gaps = 29/313 (9%) Query: 1 MSVLYP---LIQALVLFAVAPLL-SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVG 56 M++LY LI + + A LL GI R AR+ R GP +LQ + D +KL+ ++S+ Sbjct: 1 MNLLYATLGLIALYIYVSFASLLWEGIDRKLVARMQRRVGPPLLQPFYDFLKLMSKESII 60 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL-PQLGDLITLLYLFAIARFFFAISG 115 P + + L P + + V + + P+ +PL GD+I +YL + F + Sbjct: 61 PKHANKFYELAPVLALAVSIALLAYTPMGF--APLFATKGDVIVFIYLLTLIGFIRVLGA 118 Query: 116 LDTGSPFTAIGASREAMLGVLVE-PMLL---LGLWVAAQVAGSTNISNITDTVYH---WP 168 + +GSP+ IGA RE ++ V E PM+L LW + S T Y W Sbjct: 119 ISSGSPYAQIGAQREMIILVSREVPMMLALFTILWRLNNIGVEKPFS--LATFYQRNIWE 176 Query: 169 LSQSIPLV-----LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG 223 L + L+ L + A+ IE+G FD+ EAE E+ EGP++EYSG + + Sbjct: 177 LGTPLALIGTFILLVVFLAWLASEIEVGF--FDIPEAETEVAEGPMAEYSGRHLALFELS 234 Query: 224 ISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVI-----ALFENSM 278 ++K V + V +F PWG + + + ALV+ ++ + V + ++F Sbjct: 235 NAIKMFVSASLVVAIFFPWG-ISAYVGLNGIPALVVDVLFHTIKVFAVLFVSMSIFRAIT 293 Query: 279 ARLRLDITPRITW 291 RLR+ ++ W Sbjct: 294 GRLRITQAVQVFW 306 >UniRef50_A6UVJ9 Hydrogenase, component C-formate hydrogenlyase subunit 4-like protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ9_META3 Length = 304 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 5/228 (2%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 +I L+ ++APL G+ +A ++GP V +Y D+I+ L + V + WVFR Sbjct: 4 IIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWVFRF 63 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P ++ + L P+ + D I ++YLFA++RFF +S L+T S F +G Sbjct: 64 APLIISSIYLLALLFFPIAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFEGMG 123 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIPLVLALCACAF 184 ASREA + L E L + + ++ G+ ++ ++ +V L I ++++ Sbjct: 124 ASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGSVGAQTLWNQAGIFAIISIIVLFM 183 Query: 185 ATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQL 229 +E + P D + EL E + + SG G+M+ G LK L Sbjct: 184 VLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFL 231 >UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS39_9EURY Length = 322 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 11/281 (3%) Query: 21 SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIA 79 GI R AR+ +R GP + Q + D+ KLL +++V P +A W+F P + +T+ Sbjct: 24 KGIDRRISARMTSRIGPPIRQPFWDVGKLLLKETVVPENAVKWLFNAMPILAFASSMTLL 83 Query: 80 TALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEP 139 +P + +PL GDLI +LYL + A+ G +GSPF+++GA RE +L + E Sbjct: 84 LYIPFGILKAPLEGYGDLIVILYLLTLQSLAMAVGGFSSGSPFSSVGAQREMVLMMSYEM 143 Query: 140 MLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP---LVLALCACAFATFIEMGKLPFD 196 L + + A + S +++ I T W + + +VL A T E+ KLPFD Sbjct: 144 PLAIVIIGFALLYKSFSLTTIASTPV-WTMVSPVAALGVVLLFIALLVVTPAELAKLPFD 202 Query: 197 LAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF--TAGGLL 254 +AEAE E+ EG L+EYSG + +++ + + +FIP+ F + G + Sbjct: 203 IAEAETEIAEGMLAEYSGRNLALFYLSDAVRGFAMAAIEAVLFIPFTFSYVFGISLNGAM 262 Query: 255 LALVIAI----VKLVVGVLVIALFENSMARLRLDITPRITW 291 L +V ++ L++ + + + S R R++ RI W Sbjct: 263 LYIVESLWFLFKVLIIYIAAVTIVRTSFGRFRIEQASRIFW 303 >UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQH3_9EURY Length = 280 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 12/245 (4%) Query: 11 LVLFAV--APLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-ASGWVFRLT 67 ++LFA+ L GI R A + R GP + Q + D+ KL ++++ PD A W++ Sbjct: 18 IILFAIPFGLLTKGIDRKLAAHMQWRVGPPIWQPFWDVKKLFQKETIVPDDAISWLYNAA 77 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 P + + + I +P+ L GD+I +LYL I G + SPF ++GA Sbjct: 78 PILCLASTVIILLYIPLGPFSPVLNGHGDVILILYLLTIPSLAMVAGGFASSSPFASVGA 137 Query: 128 SREAMLGVLVE-PM---LLLGLWVAAQVAGSTNISNITDTVYH--WPLSQSIPLVLALCA 181 RE +L + E P+ ++ W + + + ++T V H W + +V A+ Sbjct: 138 QREMVLMMSYEFPLAATVIALAWKISSLFPHEAVFSLTAFVKHPVWNIMGPFGIVGAVIL 197 Query: 182 CAFA---TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 T E+ K+PFD+AEAE E+ EG EYSG G+ ++K +V+ + V + Sbjct: 198 LIVLLLVTTGEITKVPFDIAEAETEIAEGVFVEYSGRNLGLFYLADAVKTVVMSALIVAI 257 Query: 239 FIPWG 243 F P+ Sbjct: 258 FFPYN 262 >UniRef50_Q6APE9 Related to hydrogenase, component C-formate hydrogenlyase subunit 4 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE9_DESPS Length = 305 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 27/297 (9%) Query: 17 APLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVML 76 APL GI +A ++GP +L +Y + KLL + SV ++ ++F++ P V L Sbjct: 14 APLFPGIIGKVKAFFAGKQGPPLLIKYYTLSKLLKKGSVYSTSTSFIFKMGPTVSFTSAL 73 Query: 77 TIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 + P GD+I L Y+ I RFF ++ LDT SPF +GA+RE L Sbjct: 74 IVLLFFPFAGAAPLFSFHGDVIVLFYIMGIGRFFTVLAALDTASPFAGMGAAREVFFSTL 133 Query: 137 VEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-------- 188 E L L + ++ GS + + + PL L + A F+ Sbjct: 134 AEITLFAVLILFYRLNGSLSFAEY--------FTGDNPLSLFAVSGALMVFVIVSLFMVL 185 Query: 189 --EMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E ++P D + EL E + ++SG +++ G K V P+ Sbjct: 186 LTENSRVPVDDPQTHLELTMIHEAMILDHSGPDLALIELGAFYKLFFYSAFITHVIYPFS 245 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 G++ ALV + ++ V I + E+ AR ++D P+ F AF A Sbjct: 246 G-----GAGIVNALVFYTIMALLYV-SIGVTESITARFKMDGVPKFILTSFALAFFA 296 >UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 n=7 Tax=Deltaproteobacteria RepID=B8IYV8_DESDA Length = 313 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 30/298 (10%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATA 81 GI +A+ R G +LQ Y D+ +L+ + V + WVF P V + L Sbjct: 24 GIINRVKAKFAGRHGKPLLQTYYDLARLMRKGEVISRTTTWVFACGPAVALATALCAIAL 83 Query: 82 LPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPML 141 LP+ SPL GD I YL + RF +S LDTGS F +GASREA L EP+ Sbjct: 84 LPLGGAASPLAFGGDFILAAYLLGMGRFAIMLSALDTGSAFEGMGASREATFAALAEPLF 143 Query: 142 LLGLWVAAQVA--------GSTNISNI--TDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 L L V V + ++S++ W + + L+L C +E Sbjct: 144 FLALLVLTSVTLDMGRGPHAAFSLSSMFGGQIAGAWAMGRG-ELLLLPCIFFILLLVENC 202 Query: 192 KLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP----WGQ 244 ++P D EL E + ++SG ++ +G +LK + G+ P W Q Sbjct: 203 RIPVDDPNTHLELTMIHEVMVLDHSGPNLAMIVYGAALKLWFFAALIAGLVTPALPLWQQ 262 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 + ++ +++ +V+ + E+ MARLR+D P + A LA + Sbjct: 263 A------------GLRVLIVLLLAVVVGIVESVMARLRMDRVPYLLGGASAMAALALI 308 >UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUU5_PELPD Length = 313 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 13/271 (4%) Query: 25 RVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALP 83 R AR+ NR+GP Q + D IKL ++ + P+ A ++FRL P V + + +P Sbjct: 29 RKLYARMQNRQGPPWFQPFADFIKLSSKEDIIPEEADPFMFRLMPLVALAASVCAILYIP 88 Query: 84 VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 + G+ L GDL+ ++YL I F ++G + S ++ IGA R + E L L Sbjct: 89 IWGRGALLSFEGDLVIVVYLLTIPTMTFFLAGWYSASLYSMIGAVRSLTQLLAYEVPLYL 148 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKL---PFDLAEA 200 L A +A S +++ + P +L L + +GKL PFD EA Sbjct: 149 ALLAPACLADSWSLAGMAAYYGAHPWRW----LLNLIGFGVGLVVMLGKLEKVPFDTPEA 204 Query: 201 EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIA 260 E E+ G +EYSG + + IS++ +V+ + VF+P+G AG LL L IA Sbjct: 205 ETEIVAGAFTEYSGRLLALFRMAISIEMIVLASLLAAVFLPFGLGLGPLAGFLLYLLKIA 264 Query: 261 IVKLVVGVLVIALFENSMARLRLDITPRITW 291 ++ + + + AR R+D W Sbjct: 265 LI-----IAMTSFLRTIFARFRIDQMVDFCW 290 >UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota RepID=Q0W3I4_UNCMA Length = 306 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 23/267 (8%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 LL GI R ARL NRRGP ++Q + D+ KL G++ + + VF L V+L++ Sbjct: 33 LLMGIDRKLTARLQNRRGPPIVQPFYDVFKLFGKEDNVMNKAYLVFGLA--YQTTVVLSL 90 Query: 79 ATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVE 138 A L DL+ + ++F ++ F ++G S F+ IG++RE + + E Sbjct: 91 ALLLFEY----------DLLVIAFVFGLSFIFLVLAGYSVRSQFSYIGSNRELLQMMTYE 140 Query: 139 PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLA 198 P+LLL +++ V GS + + +Y + L I+ K P+D++ Sbjct: 141 PILLLVVFLIRLVTGSFEV----EAIYKVEPLLYTLPLALLAIFLILP-IKFRKSPYDIS 195 Query: 199 EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG-QMETFTAGGLLLAL 257 A QE+ +GP++E++G G+++ ++ + F+G+F + T G ++ L Sbjct: 196 SAHQEIAQGPMTEFAGKYLGLIE-SAHFFEMFFMLWFIGLFFVHDLVIGAITIPGWIMRL 254 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLD 284 + + ++V +N+ ARLR+D Sbjct: 255 GLMFFAYIFSIVV----DNATARLRVD 277 >UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L8T9_NAUPA Length = 279 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 28/211 (13%) Query: 11 LVLFA--VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 L LFA + + G+ R+ +AR+ +R GP ++Q + D KL+ ++ + + Sbjct: 9 LTLFAPIIGGFVYGVERIVKARMQSRVGPPLMQPFYDFFKLMDKRPMMVHSL-------- 60 Query: 69 YVMVGVMLTIAT--ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 + ++G+M +A+ AL V+ +G+ DL+ ++ IA I SP++ IG Sbjct: 61 HAVMGIMYFVASWFALLVLFMGN------DLLVAVFFHVIAVLALTIGAFSVRSPYSVIG 114 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV-LALCACAFA 185 A RE M + EP+++L + QV GS N+ +I + IPL+ L + AF Sbjct: 115 AMRELMHMISYEPLMVLMVVGFYQVVGSFNLKDILSY-------EGIPLLQLPVVFVAFV 167 Query: 186 TFIEM--GKLPFDLAEAEQELQEGPLSEYSG 214 I M K PFD+AEA QE+ GP EYSG Sbjct: 168 LAIPMMLHKSPFDVAEAHQEIVGGPEIEYSG 198 >UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina RepID=Q46G56_METBF Length = 287 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 23/208 (11%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQS--VGPDASGWVFRLTPYVMVGVML 76 L SGI R ARL R GP +LQ Y D+ KLL + + V P + +V ++++ + + Sbjct: 20 LASGIDRKITARLQGRVGPPLLQPYYDVKKLLSKDNMVVNPSQNFYVVVYLAFIILSLFM 79 Query: 77 TIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 + D + +++++ +A + G+ TGSP+ IG+SRE M + Sbjct: 80 LVFKQ--------------DFLMIIFVYTVASVALVVGGMSTGSPYARIGSSREIMAILS 125 Query: 137 VEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFD 196 EP+L+L + G+ +S + D PL PL+ A I++ K PFD Sbjct: 126 YEPVLILYALAIYLLTGTFKLSALLDA--SSPLLMYTPLI--FIAMIVVLNIKLKKSPFD 181 Query: 197 LA---EAEQELQEGPLSEYSGSGFGVMK 221 + QEL +G +EY G GF ++ Sbjct: 182 YSTSHHGHQELIKGMTTEYGGPGFATIE 209 >UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN6_HALUD Length = 328 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 18/282 (6%) Query: 13 LFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVM 71 LF A + R ARL NR GP LQ D +KLL ++S P +A+ ++R P Sbjct: 23 LFTYALAAEYVDRKLYARLQNRVGPPPLQPLADFLKLLAKESAVPENATERIYRAAPLTG 82 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + +LT +PV + + + GDL+ +L+L ++ F G +G+ F+ +G +R Sbjct: 83 LAGVLTAMLYIPVWSEAAAMSFEGDLVVVLFLLSLPSFSLFFGGWYSGNVFSQVGTTRTI 142 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI--- 188 E L + A AG+ +S+I V S P + + A AF + Sbjct: 143 TQLFGYEIPFFLACFAPAVAAGTLELSSIVAFV------GSNPAYVVVFAPAFVIGLLSL 196 Query: 189 --EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV----VLQMFVGVFIPW 242 ++ ++PFD EAE EL G L+EYSG + + ++ +V + +F+G P Sbjct: 197 QAKLERIPFDAPEAESELATGALAEYSGRKLALFRLTKDVELVVGAALLSALFLGGPYPV 256 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 G +E GG +L + + +VK + V V+++ + +ARLR++ Sbjct: 257 GAIEGI--GGAVLGIAVFLVKTLAIVAVLSVLKGVLARLRIE 296 >UniRef50_A7HGW5 Respiratory-chain NADH dehydrogenase, subunit 1 n=8 Tax=Deltaproteobacteria RepID=A7HGW5_ANADF Length = 303 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATA 81 G+ ++ R GP +LQ Y D+ KLL + +V + WVFR P +VG+ + Sbjct: 22 GVVNRTKSIFAGRAGPPLLQPYFDLAKLLRKGAVYSRTTTWVFRAGP--IVGLAAVASAG 79 Query: 82 LPVVTVGSP--LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEP 139 L + G+P L GD + YL +ARFF A++ LDTGS F +GA+RE L EP Sbjct: 80 LLLSMGGAPAALSFAGDFVLFAYLLGLARFFTALAALDTGSAFEGMGAAREVTFASLAEP 139 Query: 140 MLLLGLWVAAQVAGSTNISNI 160 L L L V A+ G+ ++S + Sbjct: 140 ALFLCLLVLARATGTLSLSGM 160 >UniRef50_B6WWH2 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH2_9DELT Length = 310 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 28/281 (9%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATA 81 GI +A++ R G VLQ Y DI K L + V + VF L P V + +L Sbjct: 23 GIIARIKAKVAGRHGKPVLQLYFDIFKGLRKGEVISQVTTPVFTLGPVVGLATVLCALAL 82 Query: 82 LPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPML 141 LP+ + SPL GD + YL + RF ++ LDTGS F +GASREA L EP+L Sbjct: 83 LPLGGMASPLRFSGDFLLAAYLLGLGRFLTMLAALDTGSSFEGMGASREAAFSALSEPVL 142 Query: 142 LLGLWVAAQVAGSTNISNITD--------TVYHWPLSQSIPLVLALCACAFATFIEMGKL 193 L L V + + + + W L ++ L+L +E ++ Sbjct: 143 FLCLLTLVGVGSTLGMHDALSLSGMLGGRPAHEWLLGRA-ELLLVPVVFFVLLLVENSRI 201 Query: 194 PFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP----WGQME 246 P D EL E + ++SG +++G +LK + G+ +P W Q Sbjct: 202 PVDDPTTHLELTMIHEVMILDHSGPSLSFIEYGAALKLWFFAALPAGILVPDLPLWQQSL 261 Query: 247 TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 + A +A+++ IV E+ MARLR+ P Sbjct: 262 CWLACIFAVAVLVGIV------------ESVMARLRMQKVP 290 >UniRef50_Q21TB7 NAD-dependent dehydrogenase subunit n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB7_RHOFD Length = 308 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 8/232 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+ L + L++ ++ +L G+ ++ R+GP +LQ D+ +LLG++ + + Sbjct: 1 MNTLLTVTHGLLVLSLPIVLVGLVNRTKSWWAGRKGPRLLQSASDLRRLLGKRPIISTVA 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +FR + YV++ L A+ +P++ +P+ D + + Y +AR IS +D GS Sbjct: 61 SPLFRSSAYVVLICGLAAASMVPMLGQFAPVQFSHDFVVVAYTLGLARIALMISAMDVGS 120 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI--PLVLA 178 F +GA+REA EP L L + A G T+ +++ ++ P I PLV+A Sbjct: 121 AFEGMGAAREASFSTYAEPALFLLIGAAGAATGMTSFADLIGQLHKTPYFPVIVFPLVVA 180 Query: 179 LCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLK 227 L E ++P D EL E + ++SG M++ +LK Sbjct: 181 LL---ILLQTEAARVPVDDPLTHLELTMIHEVMILDHSGPELAAMQYAAALK 229 >UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 n=12 Tax=Bacteria RepID=B1I3Q1_DESAP Length = 290 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/293 (30%), Positives = 130/293 (44%), Gaps = 38/293 (12%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG--WVFRLTPYVMVG 73 V L G+ R AR+ R GP V Q++ D +KL G+ P+ + WV+ MV Sbjct: 19 VGGFLRGVDRRITARMQGRIGPPVRQQFYDFLKLWGKAPSVPNKASVVWVWGYLLLTMVT 78 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 V + A DL+ + ++ A A A SP+ IGA RE + Sbjct: 79 VFMLFAGQ--------------DLLIIFFVLAFAAACLAFGAYSVRSPYAHIGAHRELLQ 124 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKL 193 + EP+LLL + G+ +S + + Y PL ++P LA A A I++ K Sbjct: 125 MLSYEPILLLAVVAIFLQTGTFMVSGVLE--YDQPLLLTLP--LAFAAVLIALGIKLRKS 180 Query: 194 PFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 PFD++ A QEL G +EYSG V++ +LV++ FV +F W Q Sbjct: 181 PFDISASEHAHQELVRGVYTEYSGRTLAVIELA-HWYELVLILAFVALF--WAQPLWV-- 235 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA-GFGFAFLAFV 302 G+LLAL ++ VV +N ARLR I+W G G L V Sbjct: 236 -GVLLALGAYFLEFVV--------DNIAARLRWTWMLSISWGIGVGLVLLNIV 279 >UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organisms RepID=A4XJP3_CALS8 Length = 286 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 43/281 (15%) Query: 20 LSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG--WVFRLTPYVMVGVMLT 77 L+GI R AR+ NR GP +LQ + D+ KL ++++ ++ + F + MV +++ Sbjct: 21 LTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSSTQILYAFLFLVFNMVALVMF 80 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 + DL+ +L++ A A + + T SP++ IGA RE + + Sbjct: 81 VLKM--------------DLLLILFVLAFAVTALILGAMSTNSPYSRIGAHRELISVLAY 126 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDL 197 EP+L+ + V GS I ++ ++ L +P + A + I++ K PFDL Sbjct: 127 EPVLIAMIIGIYFVTGSFKIDDVIK--HNNFLIFELPFI--FIAFTYVLTIKLRKSPFDL 182 Query: 198 A---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLL 254 + A QE+ +G +E++G G+++ G W ++ L Sbjct: 183 STSHHAHQEIVKGITTEFAGPILGLIELG-----------------HWYELVLLFLFIGL 225 Query: 255 LA---LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +V+AI+ +++G + L +N ARL I R+TW+ Sbjct: 226 FFAKNIVVAIIAMLLGYFLEILIDNISARLTWKIMLRLTWS 266 >UniRef50_B6BMI9 Membrane-spanning protein of formate hydrogenase, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMI9_9PROT Length = 274 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 28/220 (12%) Query: 11 LVLFA--VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 L++FA + L+ G RV RAR+ NR+GP +LQ + D+ KLLG+Q+ F + P Sbjct: 6 LIIFAPLIGGLIYGFERVVRARMQNRQGPPILQPFYDMYKLLGKQA---------FIVNP 56 Query: 69 Y-VMVGVM--LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 Y ++G+M +T+ + V +G +L+ +++L ++ F ++G S ++ I Sbjct: 57 YHSILGIMHFVTLWVVVAFVILGE------NLLYVVFLHLLSSIFIVLTGFSVRSIYSHI 110 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 GA+RE + + EP+L++ + G+ +I I + S+ + A Sbjct: 111 GANRELLSIIAYEPILIMLAVGFFMLNGTFDIDAIRSSS-----SELASMFFLFLAFLLV 165 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM---KW 222 +++ K PFD AEA QE+ G E+SG F + KW Sbjct: 166 IPVKLKKSPFDAAEAHQEIVGGVEVEFSGVFFEFLYMAKW 205 >UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE2_9FIRM Length = 287 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 33/230 (14%) Query: 4 LYPLIQALVLFAVAPL----LSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDA 59 + P++ L +APL L G+ R AR+ R+GP ++Q + D+ KL +Q + ++ Sbjct: 1 MMPVVSVLAYLLLAPLVGALLDGLDRRVSARMQARQGPPMMQPFYDLKKLFSKQMIAVNS 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 V ++L ++ + + GS L D++ L++ + A F ++ Sbjct: 61 ------------VQMLLNLSYLIFLAVAGSMLFAGADILMCLFILSTADMFLVMAASSDS 108 Query: 120 SPFTAIGASREAMLGVLVEPMLLL---GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 SPF+ +GA RE + + EP+ LL G ++A GS ++ +I +S S L Sbjct: 109 SPFSTLGAGREMIQMMAYEPLTLLMAVGFYLA---TGSFHVGDIIR------MSHSAVLT 159 Query: 177 LA--LCACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMK 221 + L F T I++ K PFDL+ A QE+ +G +E +G VM Sbjct: 160 MPGFLLGFMFITAIKLRKSPFDLSTSHHAHQEMVKGITTEMAGPTLAVMN 209 >UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IE93_9EURY Length = 321 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 11/278 (3%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 L GI R AR+ NR GP V Q + D+ KLL +++ W+F P + +L Sbjct: 25 LFMGIARKVTARIQNRVGPPVYQNFLDVGKLLAKKT--NIKHNWIFDFAPLFALAGVLLA 82 Query: 79 ATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVE 138 LP+ L GDLI LLY+ AI FA+ +G+P +G R L + E Sbjct: 83 LAYLPMGGY-KMLSGEGDLILLLYIMAIPSLGFALGAGASGNPNAGVGVMRALTLMLSYE 141 Query: 139 PMLLLGLWVAAQVAGSTNISNITDT--VYHWPLSQSIPLVLALCACAFATFIEMGKLPFD 196 LL L + ++S + D Y W + I L ++ A A M + PFD Sbjct: 142 MPFLLVLLSLMIFYNTASLSVLLDKQMSYLWGI---IALPISALAADLALQGMMMEKPFD 198 Query: 197 LAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLA 256 +A A E+ GPL E+ G G++ + ++ +FV +F+ G + G++ Sbjct: 199 IAIAPHEIASGPLVEFGGKYLGMLMLFSAGSIVLETTLFVDLFLGGGIVLNPATYGIIAY 258 Query: 257 LVIAIV--KLVVGVLVIALFENSM-ARLRLDITPRITW 291 +V +V L+ V +IA+F N++ R R++ + W Sbjct: 259 VVNYLVWFALIFVVWMIAVFINAVFPRFRIEQAFKFYW 296 >UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL4_9EURY Length = 345 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 33/283 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLT 77 R AR H+R GP G+LQ D++KLL ++++ PD A +F+L+ ++ + + Sbjct: 60 RKLMARAHSRHGPTYVGKFGILQNLADVVKLLAKENIIPDKADNPLFKLSLPIVYALFVL 119 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 I P+ + + LI + + + I G +G+ F +IGA R ++ + Sbjct: 120 IVIFTPLTSTFVGINTSIALIAVFLILSFIPILMFIIGWASGNKFGSIGAQRSIVMLISY 179 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-----EMGK 192 E LLL + A +A S ++S I + QS +AL F F EM + Sbjct: 180 EIPLLLVIAAIAMLAHSYSLSTIVN-------DQSSIWYVALMPIGFVVFFIVMLAEMER 232 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVMKW----GISLKQLVVLQMFVGVFIPWGQMETF 248 PFDL EA+ EL G L++ S +G+ + I + L++ +F G WG Sbjct: 233 PPFDLREADSELIAGWLTDVSAPYYGLALFLDYTRIFVGTLLIAVLFFG---GWG----- 284 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G LL ++K+V+ + I + ++ R++++ R W Sbjct: 285 --GPLLPPFAWILIKIVILSIAIVIIRVTVVRMKINRLLRFGW 325 >UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcaceae RepID=B6YU34_THEON Length = 309 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 10/275 (3%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATA 81 GI R AR+H R GP + Q D IK G++ G ++ +G + Sbjct: 24 GIIRKVSARIHRRVGPPIYQPILDTIKFFGKKE--NITHGLIYDFGIIYALGATVLALFF 81 Query: 82 LPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPML 141 +P+ +V S L GDLI + +L I + + +G+P+ IGA R + + ++ L Sbjct: 82 IPLGSV-SILRAYGDLILITFLLEIPMLGIMFAAMSSGNPYAGIGAQRALLTMLAIQVPL 140 Query: 142 LLGLWVAAQVAGSTNISNIT--DTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAE 199 + A+ G+ + I + W + +PL+LA A GK PFD+ Sbjct: 141 GFAIIALAEFYGTFSTYEIVMAQQISGWSIIH-LPLLLAAIAYDIVLQAMFGKEPFDIMI 199 Query: 200 AEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL--LLAL 257 A E+ GP+ E+ G G+++ ++ F +F+ + F + L + +L Sbjct: 200 APGEISLGPMVEFGGKHMGILQIQHAIALFAETLFFSNIFLGGAVITAFASPILNTIASL 259 Query: 258 VIAIVKLVVGVLVIALFENSM-ARLRLDITPRITW 291 I +VK + VL+IA+F +++ R +D + W Sbjct: 260 AILLVK-QIAVLLIAVFVSTIFPRFTIDQAAKFYW 293 >UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rhodothermaceae RepID=NUOH_SALRD Length = 345 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 18/217 (8%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPY 69 A LL R A + NR GP G+LQ + D++K + ++ V P S ++ + P Sbjct: 23 ASLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDVQPAQSNKFIHSMAPV 82 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLG-DLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 VMV + +T A+ +P G + L +I LL L +I+ + ++G + S F+ +G Sbjct: 83 VMVVIAMTTASLIPFAE-GVVVADLNVGVIMLLALTSISVYGVTLAGWSSNSKFSLLGGL 141 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD------TVYHWPLSQSIPLVLALCAC 182 R A V E + L + +AGS N I + + W ++ L Sbjct: 142 RSAAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWNAVRNPIGCLIFIVT 201 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 AFA E + PFDL EAE+EL G +EYSG FG+ Sbjct: 202 AFA---ETNRAPFDLPEAEEELVAGYHTEYSGMKFGM 235 >UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=7 Tax=Coriobacteriaceae RepID=C7N623_SLAHD Length = 939 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 49/305 (16%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 ++L LI L +AP LL+GI R A++ R GP +LQ Y D+ KL+ + V Sbjct: 649 TLLRILIGTLAFAILAPVIGCLLAGIDRKLTAKMQGRVGPPLLQPYYDVQKLIAKDDVHV 708 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ + G +T A V+ G G+ + ++L ++ F ++ Sbjct: 709 NS-----------VEGTYVTAALIFAVLA-GGIFYGGGNFLLCVFLVTLSGLMFILAAYS 756 Query: 118 TGSPFTAIGASREAMLGVLVEPMLL---LGLWVAAQVAGSTNI--SNITDTVYHWPLSQS 172 T SP+ +GA REA+ + EPML+ +GL++ ++ + + V WP+ Sbjct: 757 TRSPYAEVGADREALQVMSYEPMLMFLAVGLFLTLGTFDASGVFLYDAPPIVALWPIFIG 816 Query: 173 IPLVLALCACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFG---VMKWGISL 226 + +L I++ K PFDL+ A QEL +G +E SG VM W S+ Sbjct: 817 LMFILT---------IKLRKSPFDLSYSHHAHQELVKGITTEMSGKTLAKIEVMHWCESV 867 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 L + MF P L+LV+A+V + + +N+ AR++ Sbjct: 868 LFLGWVGMFFVCHNP-------------LSLVLAVVVAFLAFFLEIFIDNNFARVKWQSM 914 Query: 287 PRITW 291 + W Sbjct: 915 LKWAW 919 >UniRef50_D0WEF6 Putative Ech hydrogenase, subunit EchA n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF6_9ACTN Length = 973 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 28/236 (11%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVM 75 V LL+G R+ AR+ R GP +LQ Y D+ KLL + V ++ V YV ++ Sbjct: 701 VGCLLAGADRIVTARMQGRVGPPLLQPYYDVRKLLVKDDVAVNSVEDV-----YVTCALI 755 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 + + G+ L +L ++ FF ++ T SP+ IGA RE + + Sbjct: 756 FALLSGGTFFGGGNFL-------MCAFLITLSALFFILAAYSTRSPYAEIGADRETVQVM 808 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALCACAFATFIEMGKLP 194 EP++L G+ +++ + +Y PL IP+ LAL F I++ K P Sbjct: 809 AYEPVILFMAVCMFLAIGTFDVAGV--ALYSRPLIVVCIPVFLAL---MFVLTIKLRKSP 863 Query: 195 FDLA---EAEQELQEGPLSEYSGSGFG---VMKWGISLKQLVVLQMFVGVFIPWGQ 244 FDL+ QE+ +G +E SG VM W S V+ +VG+F WG Sbjct: 864 FDLSYSHHGHQEIVKGITTEMSGRTLAKVEVMHWCES----VLFLGWVGMFFVWGN 915 >UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=Bacteria RepID=NUOH2_SYNFM Length = 331 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVM 75 + R ARL R GP G+LQ DI+K++ ++ P+ A +F L P V+ Sbjct: 32 LERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTVPEGAERTIFMLAPAVVAATA 91 Query: 76 LTIATALP----VVTVGSPLP-QLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIG 126 L + +P V G +P + DL + LLY FA++ + A+ G + S ++ +G Sbjct: 92 LLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSLGVYGVALGGWASNSKYSLLG 151 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 R A + E L L + A S ++ +I +P + P+ A+ + Sbjct: 152 GIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEKYPFILTQPVAFAIFVIS--A 209 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME 246 E+ ++PFDL EAE EL G +EYSG FG+ G + VL V V G Sbjct: 210 MAEIKRIPFDLPEAENELGAGFHTEYSGMRFGLFFLG-EYVNMQVLGGLVAVLFLGGW-- 266 Query: 247 TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G LL +V +K+V+ L++ ++ RLR D + W Sbjct: 267 ---HGPLLPPVVWLFIKIVLVALIMIWVRGTLPRLRYDQLMALGW 308 >UniRef50_A6DBV1 Ech Hydrogenase, Subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBV1_9PROT Length = 276 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 20/198 (10%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 L+ G+ R+ RAR+ +R GP ++Q + D KL+ ++ + + + ++G+M I Sbjct: 16 LIYGVERIVRARMQSRLGPPLMQPFYDFFKLMDKRPMMVHSM--------HALMGIMYFI 67 Query: 79 AT--ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 A A V+ G+ D++ ++ IA I S ++ +GA RE M + Sbjct: 68 AEWFAFAVLIFGN------DILLAIFFHVIAVLALVIGASSVRSAYSVMGAIRELMHMIS 121 Query: 137 VEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFD 196 EP+++L + V+GS + +I + +P+ + +P+V + ++ K PFD Sbjct: 122 YEPIMVLLVIGLFLVSGSFDYRDILNYE-GYPILE-LPIVFIVFLLTIPMMLQ--KSPFD 177 Query: 197 LAEAEQELQEGPLSEYSG 214 +AEA QE+ GP EYSG Sbjct: 178 VAEAHQEIIGGPEIEYSG 195 >UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL02_9PLAN Length = 434 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 94/320 (29%), Positives = 145/320 (45%), Gaps = 48/320 (15%) Query: 3 VLYPLIQALVLFAV----APLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLG 51 +L +IQA++L V A + + R R+ +R GP G LQ D IKLL Sbjct: 19 LLAAIIQAVLLLHVIAVGAVVFIWMERKIAGRIQDRLGPTRTGGKFGWLQTLADGIKLLS 78 Query: 52 RQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVT--VGSPLPQLGDLITLLYLFAI-- 106 ++ + P DA +F+L PY+ + T ALP + VG L I L ++ A+ Sbjct: 79 KEDLMPRDADPLLFKLAPYISLAASFTAFLALPFASGWVGVRLN-----IALFFVIAVLG 133 Query: 107 -ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT-- 163 F ++G +GS ++ G R+A V E L + + V ++G+ ++ I D Sbjct: 134 LEVFGVILAGYGSGSKWSLFGGMRQAAQVVSYEVPLGICVVVPVLISGTMDLVTIADQQS 193 Query: 164 -------VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG-- 214 +H P + V C A + + PFDLAEAE EL G L+EYSG Sbjct: 194 GLFSNWLFFHDPFCMLLFWVYFTCGIA-----SVNRAPFDLAEAESELVSGFLTEYSGIR 248 Query: 215 -SGFGVMKWG--ISLKQLVVLQMFVGVFIP-----WGQMETFTAGGL--LLALVIAIVKL 264 S F + ++G + L + F G P W FT L L+ L ++K Sbjct: 249 WSLFFMAEYGSMFLVSGLAAILFFGGWNGPIPIFFWVPEGNFTLETLANLVGLGNFLLKA 308 Query: 265 VVGVLVIALFENSMARLRLD 284 V+GV+V+ ++ RLR+D Sbjct: 309 VLGVVVMMWVRWTLPRLRID 328 >UniRef50_C1XWY4 Formate hydrogenlyase subunit 4 n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY4_9DEIN Length = 285 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 118/234 (50%), Gaps = 21/234 (8%) Query: 21 SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYV-MVGVMLTIA 79 +G + +ARL NR GP L +Y+++ KL + + P + +F + P V ++GV + A Sbjct: 14 TGSLKWLKARLQNRVGPDPLYDYKNLFKLWRKSWIRPRGASPLFLMAPVVGLLGVAIAAA 73 Query: 80 --TALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 ALP ++ GD + L+YL + RFF ++ LDTGS F G+ RE +L VL Sbjct: 74 FLPALPGISFA------GDFLLLVYLLNLGRFFQVLAALDTGSAFGGQGSYREGLLTVLA 127 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV--LALCACAFATFIEMGKLPF 195 EP +L L A +GS ++++ PL+ LV LAL A + A E ++P Sbjct: 128 EPGTVLALGAAGLASGSLSLAHFA------PLAPQNALVYILALVALSLALLAEGARMPV 181 Query: 196 DLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME 246 D EL E L ++SG + + +K LV + + + + +P+G + Sbjct: 182 DDPTTHLELTMIHEAQLLDHSGPLLALYELSAGMKLLVYVGL-IALLLPFGGLS 234 >UniRef50_B8J1E4 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Desulfovibrio RepID=B8J1E4_DESDA Length = 283 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVM 75 V LL+G+ R ARL +R GP +LQ + D+ KL G+++ +A W+ + Y+ + Sbjct: 17 VGGLLTGVDRRLTARLQSRLGPPLLQPFYDVFKLFGKEASVTNA--WLV-FSAYM---TL 70 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 ++ A AL + +G GDL+ L ++ + F + L SP++ +GA RE +L + Sbjct: 71 ISSALALLIFFMG------GDLLLLFFVLTVGAVFQVVGALCVPSPYSNVGAQRELLLML 124 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPF 195 EP+L+L A GS +I + V+ + + L A +A I++ K PF Sbjct: 125 AYEPILILVFVGFAMCTGSFSI----EAVFAQDQPLLLKMPLLFLALGYALTIKLRKSPF 180 Query: 196 DLA---EAEQELQEGPLSEYSGSGFGVMK 221 D++ QEL +G +EYSG G+++ Sbjct: 181 DISASHHGHQELVKGVQTEYSGPYLGIIE 209 >UniRef50_A9FF80 Formate hydrogenlyase subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF80_SORC5 Length = 307 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 12/274 (4%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 +L+G+ ++ R+GP VLQ D+ +L + SV + +FR+ PYV + + Sbjct: 18 VLTGVINRVKSLWSGRKGPPVLQLAHDVRRLFRKSSVYSTTTTPLFRIAPYVFLATAVGS 77 Query: 79 ATALPVVTVGSPLPQLG-DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 A P++ +PL D + Y++ + R ++ LDTGS F +GA+REA+ L+ Sbjct: 78 ALIAPLLG-ATPLASFQLDFVWFAYVWGLGRVAVMLAALDTGSSFEGMGAAREAVFSSLL 136 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDL 197 EP L L + V G + H S + A+ A +E ++P D Sbjct: 137 EPALFLVTGALSFVGGRRTLHEALAPHLHAGASAFV-WGAAVVAMLIVLQVETARMPVDD 195 Query: 198 AEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLL 254 EL E + ++SG + G ++K V + + PW Sbjct: 196 PTTHLELTMVHEVMILDHSGPDLACIHLGSAIKLFVGASIVATLLNPWAGSGGAAC---- 251 Query: 255 LALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 A + L VG VI E+ +ARL+L P+ Sbjct: 252 -AAANLALTLAVGA-VIGTIESLVARLKLRSVPQ 283 >UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC30_AERPE Length = 375 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 24/287 (8%) Query: 25 RVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVM 75 R A AR+ R GP G+L D+++ + +Q + P + F + P V + V Sbjct: 39 RKAAARVQRRIGPYWASPRLGGLLHLVADMMRYMFQQVIIPRTVDYFPFLVAPIVGMAVS 98 Query: 76 LTIATALPVVTVGS--PLPQLGDLITLLYLFAIARF---FFAISGLDTGSPFTAIGASRE 130 + +P+ S PLP +LL AI+ F ++G +PFT +G RE Sbjct: 99 ILPFAVVPLTANPSYWPLPPGLMEYSLLLALAISTLPPIFLIVAGWAANNPFTIVGGVRE 158 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT--VYHWPLSQSIPLVLALCACAFATFI 188 A + + E + +L L A GS NI I + W + + LA A A + Sbjct: 159 AFIILAYELIAILSLLAPAITVGSFNIVEIVQAQGFFKWFIILN---PLAFLAAVIAIAM 215 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ----LVVLQMFVGVFIPWGQ 244 PF++ E+E E+ GP +EYSG + + G +++ L+ + +G + P Sbjct: 216 STSAFPFEIPESEPEVVAGPFTEYSGILYALNMGGAYMRRFAFSLIASLVLLGGWYPVVP 275 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 E G LL +LV+ + K + L I+ R RLD + W Sbjct: 276 GEGVVMGYLLPSLVV-VAKAALVTLAISFLRAVYGRYRLDQALDLAW 321 >UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAT3_PLALI Length = 419 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 62/329 (18%) Query: 7 LIQALVLF---AVAP-LLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSV 55 LI L+LF AV+P + R R+ +R GP G LQ D IKL+ ++ + Sbjct: 29 LIHTLLLFHVFAVSPAFFIWLERKVSGRIQDRLGPTRVGGKFGWLQSVADGIKLIQKEDL 88 Query: 56 GPDASG-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A+ W+FRL PY+ + T+ LP + + + L + ++ ++ Sbjct: 89 APAAADQWLFRLAPYLALVASFTVFMVLPFSRGWAAVVIESSVFLALAIISLEVLGIILA 148 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT----------V 164 G +GS + G+ REA V E L L + G+ N I + + Sbjct: 149 GWSSGSKWALFGSMREAAQMVSYEIPLALCALIPVMAVGTLNFVTIAEVQSGFFLTNWLI 208 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG- 223 +H P + V A A + + PFDLAEAE EL G +EYSG M+W Sbjct: 209 FHDPFTFVAFFVYFTVAIA-----SVKRAPFDLAEAESELVAGFHTEYSG-----MRWSY 258 Query: 224 ---------ISLKQLVVLQMFVG----------VFIP---WGQ---METFTAGGLLLALV 258 +S+ + VL +F+G + P WGQ ++ F+AG L L+ Sbjct: 259 FFLAEYASMLSVSCVAVL-LFLGGWWSGTGLEDLLAPVRNWGQNFPVQGFSAGNYALNLL 317 Query: 259 IAIVKLVVGVLVIAL---FENSMARLRLD 284 A + L L++ + ++ RLR+D Sbjct: 318 GAHIFLFKASLLVTVQIWVRWTLPRLRID 346 >UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Bacteria RepID=B9MR80_ANATD Length = 286 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 51/305 (16%) Query: 9 QALVLFA-------VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 QAL++ A + LL+GI R AR+ NR GP +LQ + D+ KL ++++ + Sbjct: 3 QALIVLASVVLSPIIGGLLTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSNTQ 62 Query: 62 --WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + F + +V V++ + ++ + LI + + T Sbjct: 63 ILYAFLFLVFNIVAVVMFLLKMDLLLILFILAFATTALI--------------LGAMATN 108 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 SP++ IGA RE + + EP+L+ + V GS NI +I ++ L +P + Sbjct: 109 SPYSRIGAHRELISVLAYEPVLIAMIVAIYFVTGSFNIQDILK--HNSFLILDLPFI--F 164 Query: 180 CACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A ++ I+ K PFDL+ QEL +G +E++G G+++ G Sbjct: 165 IAFSYVLTIKFRKSPFDLSTSHHGHQELVKGITTEFAGPVLGLIELG------------- 211 Query: 237 GVFIPWGQMETFTAGGLLLA---LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA- 292 W ++ L + +AI +++ + + +N ARL I ++TW+ Sbjct: 212 ----HWYELVLLLLFVWLFFAKNIFVAIAAILICYFLEIVIDNISARLTWKIMLQLTWSV 267 Query: 293 GFGFA 297 FGFA Sbjct: 268 AFGFA 272 >UniRef50_B8D5G5 Hydrogenase-4 component C n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5G5_DESK1 Length = 291 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 22/217 (10%) Query: 19 LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 L GI R +A L +R GP + Q D+ KLL ++ V F P V +L+I Sbjct: 19 LYDGIERKTKAILQSRVGPPLHQSLLDLGKLLSKEPVE-------FPSYPLVFYTTVLSI 71 Query: 79 ATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG-----LDTGSPFTAIGASREAML 133 V+ V + + LG +LL AIA A + L +P++ IG RE ML Sbjct: 72 ILEFAVILVLN-IAVLGINTSLLMPVAIALVTVAQTANISMPLLVSNPYSQIGGMREVML 130 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKL 193 ++ E L+ GL + S + S+I V PL + AT++ G++ Sbjct: 131 ALVNEFSLVAGLALFYYYTVSQHPSSIMGWVITMPL---------IILVTTATYVLSGRV 181 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 PFD+AEAE EL G L E SG + + I LK+ V Sbjct: 182 PFDIAEAEVELASGVLIELSGRVLALYLYSIYLKRYV 218 >UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergistaceae RepID=C1TPP1_9BACT Length = 332 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 + +FAV L G+ R A + R GP +LQ DI+KLLG++++ P A+ F P+ Sbjct: 19 ITVFAV--LFEGVDRKLHAVMQRRIGPPLLQPVYDILKLLGKENIVPRWATPVFFHGGPW 76 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 V + + + +P+ ++ L GDLI +LYL +++ A+ G +GSP +GA R Sbjct: 77 VAMIASMMVFMYIPMGSLPPVLNGSGDLILILYLLSLSGVAVAVGGFASGSPIANVGAQR 136 Query: 130 EAMLGVLVEPMLLLGL----WVAAQVAGSTNISNITDTVYH--WPLSQSIPLVLALCA-C 182 E +L + E L + + W A ++ + ++ V W + + +C Sbjct: 137 EMILMMSYEVPLAIVVSTLAWFAYKLGMPGHPFSLETYVATSVWSVVGKAGFLGLICLFV 196 Query: 183 AFATFI--EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A T I E GK D+ EA+ E+ EG EYSG ++ G +L+ + + V +F Sbjct: 197 AILTVIPGETGKGLMDIPEAKTEILEGVTVEYSGVNLALLHIGFNLRGAAISALVVSLFF 256 Query: 241 PWGQMETFTAGGLLLALV----IAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 P+ + G+ +A++ + +V V + + RL++ WA G Sbjct: 257 PFSLGKAIGLSGVPMAIIDFPWFWVKVFLVEVFGVTFLRTAFGRLKIWQASHFYWAQVG 315 >UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31279 Length = 348 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 36/312 (11%) Query: 7 LIQALVLFAVA----PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +I+A+V+F V PL + R R+ R GP G LQ DI KLL +Q Sbjct: 24 IIKAVVIFLVGFTLVPLALMLDRKLMGRMQMRYGPNRVGPFGALQPMADIGKLLFKQQFR 83 Query: 57 PDAS-GWVFRLTPYVMVGVMLTIATALP----VVTVGSPLPQLG-DL-ITLLYLFA---I 106 P S G++F + P + + A+P V G+ + G D+ I +LY+FA + Sbjct: 84 PRTSVGFLFAVAPAISMVCAAAAFAAIPFGDTVDIFGAKVGLYGIDVSIGILYIFAWSAL 143 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + + + G +GS ++ +GA R A + E + L L AG+ +++ I + Sbjct: 144 SVYGLMLGGWASGSKYSFLGAMRSAAQLISYEVSMGLSLIGVVITAGTLSLTGIVEA--Q 201 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG----SGFGVMKW 222 + IP + C A F E G+ PFDL+EA+ EL G +EY G S + + Sbjct: 202 AGMWYIIPQFIGFCIFLVAAFAETGRPPFDLSEADAELVGGYSTEYGGGRFASYYAAEYF 261 Query: 223 GISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALF---ENSMA 279 + + + + MF G G M F G V IV LV VLVI +F + Sbjct: 262 HMVIASAIAVTMFFG-----GWMLPF--GIDPPQWVDPIVVLVKTVLVICVFVWARTTFP 314 Query: 280 RLRLDITPRITW 291 R R D + W Sbjct: 315 RPRYDQLMSLGW 326 >UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmental samples RepID=B3T913_9ARCH Length = 436 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 57/331 (17%) Query: 23 ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGV 74 + R A+L R GP G+LQ D +KL+ ++ + P A +F P + Sbjct: 102 VERKMLAKLQLRVGPFYCGKVEGILQIMGDGLKLISKEIIIPAKADKPIFWAVPVLFAAT 161 Query: 75 MLTIATALPVVTVGSPLPQLGDL-ITLLYLFAIARFFFAIS---GLDTGSPFTAIGASRE 130 +PV +P + D+ + LL +FA+ FF I+ G + S F IG R Sbjct: 162 AGAFVALIPV----APGWVVADIDLGLLAVFAVIGFFPIITVLAGWSSNSKFPFIGGIRA 217 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL---VLALCACAFATF 187 V E L+L L + G+ N+S I ++ ++P +P+ V +C A Sbjct: 218 LYQMVSFEIPLILSLLGIVMLTGTLNLSEIVESQVNFPWIIFMPIGAIVFFICILA---- 273 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI------- 240 E+ ++PFDL EAE E+ G L+E SG +G+++ G LK +FV +F+ Sbjct: 274 -ELERIPFDLPEAESEIVAGWLTELSGMMYGLVQLGSYLKLYAFAGLFVVLFLGGWNGPS 332 Query: 241 --PWGQMETFTAGGLLL---ALVIA-------------------IVKLVVGVLVIALFEN 276 P M G+++ ALVI I+K + I L Sbjct: 333 VFPMEPMAKVITDGIVIMPDALVIKDIPGLPLFAGEMINGTIWFILKTAAVIFFILLPRG 392 Query: 277 SMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 R+R+D+ +I W + LAFV++ A Sbjct: 393 VFPRVRIDLLLKIGW--YKLIVLAFVNIFIA 421 >UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWK6_9PLAN Length = 455 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 22/209 (10%) Query: 23 ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGV 74 + R R+ +R GP G LQ D +KL+ ++ V P DA +F+L PYV Sbjct: 54 MERKIAGRIQDRLGPTRVGGKFGWLQTLADGLKLIAKEDVTPKDADRLLFKLAPYVSFAA 113 Query: 75 MLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 T ALP + + ++ + + F ++G +GS ++ G REA Sbjct: 114 SFTAYMALPFSSGWVAQDVNIGVFFIVAVLGLEVFGVILAGYASGSKWSLFGGMREAAQV 173 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW---------PLSQSIPLVLALCACAFA 185 V E + + + + + G+ N+ I D W P + ++ V CA A Sbjct: 174 VSYEVPIGMCIVIPVVILGTMNLVTIGDMQAGWFTNWLIFNDPFTFAVFFVYFTCATA-- 231 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 + + PFDLAEAE EL G +EYSG Sbjct: 232 ---SVNRAPFDLAEAESELVAGFHTEYSG 257 >UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Thermotogaceae RepID=A9BJL9_PETMO Length = 300 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 18/253 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS L L+ + F L GI R A++H R GP Q + DI K L + S+ Sbjct: 1 MSYLIALMIVFIGFLWQVSLDGIQRKVTAKVHRRVGPPWYQTFMDIFKALTKSSI---TH 57 Query: 61 GWVFRLTPYVMVGVMLTIATA--LPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDT 118 G+++ VM+ + TIAT LP + L + ++YL AI A+S + Sbjct: 58 GFIYDFG--VMMALGGTIATFMFLPFGNI-VAFNGLDNFFVVVYLLAIGSLGMAMSASGS 114 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-----DTVYHWPLSQSI 173 G+ + IG R + E ++ ++ V G+++++ + + ++ W + ++ Sbjct: 115 GNAWAGIGIMRALTQMLAYEVPFMIVVFGMIHVYGTSSLTELAHVQQMNGIFGWHIF-TM 173 Query: 174 PLVLALCACAFATFIEM-GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 PL AF + + M K+PFD A E+ GP+ EY G FG++ LV + Sbjct: 174 PLG---AIVAFISLLGMLNKVPFDTPIAPTEIASGPMVEYGGKHFGMLILQHEFATLVEV 230 Query: 233 QMFVGVFIPWGQM 245 +FV +F+ G + Sbjct: 231 GLFVSLFLGGGNL 243 >UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOH_RUBXD Length = 331 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 17/199 (8%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G+LQ D++KL +++V P A WVF P M L A V+ G P Sbjct: 49 NRVGPRGLLQPAADVVKLFIKENVSPGRADRWVFLAAPIAM---FLPAAAVWLVIPFG-P 104 Query: 91 LPQLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLW 146 + DL I L+Y FAI ++G + S F+ +GA R A + E L+L L Sbjct: 105 GMVVADLNIGLVYFFAITSIGALGVIMAGYGSRSNFSLLGALRGAGQMISYEVPLILSLL 164 Query: 147 VAAQVAGSTNISNITDT----VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 A + GS ++ +I + ++W + +P+ LA A E+ ++PFDL E E Sbjct: 165 GVAMLTGSLSMVDIVEYQAGGFWNWIIWPQLPMFLAFFVSGLA---EVKRIPFDLPEGES 221 Query: 203 ELQEGPLSEYSGSGFGVMK 221 E+ G + EYSG + +++ Sbjct: 222 EIVGGFMIEYSGMTWALIQ 240 >UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Desulfurococcaceae RepID=A3DMA3_STAMF Length = 330 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 27/289 (9%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVML 76 I R R+ RRGP G+LQ + D +KLL ++ V S + ++ P ++ + + Sbjct: 32 IYRKVTGRVQYRRGPTYVGPFGLLQPFADFMKLLLKEDV---VSRYSAKIAPVIVAALGV 88 Query: 77 TIATALPVVT--VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 TAL ++T P+ D+I YL GL T +P+T++G R L Sbjct: 89 GAITALTLMTPLAYDPVHAPFDIIVFFYLALWTSLSIMFLGLATPNPYTSLGVGRYMALL 148 Query: 135 VLVEPM----LLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALCACAFATFIE 189 V EP L+ + +A+++ S S ++ + L + ++ +A+ A A F+ Sbjct: 149 VSAEPAYVSSFLVPVIIASKIDPSIEYSLYGSSLISYQLWTSNVFSFIAMLIAAIAGFLA 208 Query: 190 MGKL----PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI--PWG 243 M + PFD EAE E+ G +EY G + + + +++V+ ++V +F+ W Sbjct: 209 MMGILEIKPFDFPEAEGEIYWGVFTEYGGPRLALAFFILFAERIVIPIIYVLLFLGGSWP 268 Query: 244 -QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + T GGLL + K +V +++++ +N M R R W Sbjct: 269 IDISTNYLGGLL----VIFAKFIVVFILLSVIDNVMPRFTPAQGVRFLW 313 >UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Methanosarcina RepID=FPOH_METBF Length = 346 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 25/290 (8%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R A + R GP G+LQ D IKL ++ + P +A +F M+G + Sbjct: 38 LERKLSADIQTRMGPCRVGKYGLLQLVADAIKLFTKEDLKPLNADSLLFNNANIFMLGSV 97 Query: 76 LTIATALPVVTV-----GSPLPQLGDLITLLYLFAIARF-FFAISGLDTGS--PFTAIGA 127 + ALPV V PL I++LY+ A++ F I + GS ++ +GA Sbjct: 98 FLMLVALPVGAVFINGVEYPLAVTQMDISVLYIEAVSALSIFGIFMVAYGSNNKYSLLGA 157 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI-TDTVYHWPLSQSIPLVLALCACAFAT 186 R V E L + + A + GS NI +I T HW +I L C F + Sbjct: 158 FRNFARMVGYEVPLGITVISVAAMTGSLNIVDISTAQGLHW----NIFLQPLGCFVFFVS 213 Query: 187 FI-EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG----ISLKQLVVLQMFVGVFIP 241 + +MG+LPFD E+E+EL G ++EY G FG+ + + L +V +F+G + Sbjct: 214 LMADMGRLPFDQNESEEELIAGWITEYCGMRFGLGFFAEYIHMILGSFLVALLFLGGWNV 273 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G + + G+++ IVK+V ++VI ++ R R+D ++W Sbjct: 274 PGFIANNSFFGIIVPTGFLIVKVVFVLMVIIGLRWAVPRFRIDQVVDLSW 323 >UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Archaea RepID=D2RES9_ARCPR Length = 344 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 128/292 (43%), Gaps = 34/292 (11%) Query: 25 RVARARLHNRRGP--------GVLQEYRDIIKLLGRQS-VGPDASGWVFRLTP---YVMV 72 R AR+ R GP G+LQ D ++ L ++ V DA+ F P ++ + Sbjct: 52 RKIAARIQWRVGPKEVSPHIGGLLQVLADALRYLYQEVIVHRDANKVYFLQLPILSFIPI 111 Query: 73 GVMLTIATALPVVTVGSP--LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 + LT+ A V + S +P L LI L+ LF IA G + F IG RE Sbjct: 112 LLALTLVPAGNVYALRSEFGIPCLVALIALIPLFVIA------IGWSANNRFAYIGLVRE 165 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV----LALCACAFAT 186 + + + E L+L + + + + I + QSIP V LA AT Sbjct: 166 SFMYISYEIPLILSVVAMLMLYKTGDAITIVE-------RQSIPGVFLNPLAFLTFLIAT 218 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG-VMKWGISLKQLVVLQMFVGVFIPWGQM 245 + G+LPFD+ EA+QE+ GP EYSG FG VM L+ L M + F W Sbjct: 219 VMASGRLPFDIPEADQEIAFGPYVEYSGIMFGLVMVLAYEKLYLLSLLMVILFFGGWRGF 278 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 E G L + + + L+V + I + AR R+D RI W GF A Sbjct: 279 EIAVLGDLSDVIWLMLKALIV-MCAIVITRAIYARYRIDQALRIGW-GFMMA 328 >UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y7_GEMAT Length = 418 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 140/328 (42%), Gaps = 57/328 (17%) Query: 7 LIQALVLFAV----APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +++ LV+F V +L+ + R A +RRGP G+LQ D IK ++ Sbjct: 1 MVKILVVFGVWMLTVAMLTLVERKLAAWFQDRRGPNRAGPGGILQPVADGIKNFMKEETN 60 Query: 57 PD-ASGWVFRLTPYV-MVGVMLTIATALPVVTVGSPLPQLGDLITL---------LYLFA 105 P A W+F + P + + MLT A V+ + +PLP LI + L++ A Sbjct: 61 PPFADRWLFIIAPALAFIPAMLTWA----VIPLAAPLPTPWGLIDMAVAPVPVGFLFVLA 116 Query: 106 IAR---FFFAISGLDTGSPFTAIGASR--------EAMLGVLVEPMLLLGLWVAAQVAGS 154 I+ + ++G + + + +G R E +G+ P+LLL AG+ Sbjct: 117 ISSLGVYGMVLAGWSSNNKYALLGGLRSSAQMVSYEIAMGMSTIPVLLL--------AGN 168 Query: 155 TNISNITDTV--YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 +++ I W L +A A F E +LPFDL EAE EL G +EY Sbjct: 169 VSLNTIVQQQAGMGW---NVFSLTIAWFTFLVAAFAETNRLPFDLPEAESELVAGYHTEY 225 Query: 213 SG---SGFGVMKWG--ISLKQLVVLQMFVGVFIP---WGQMETFTAGGLLLALVIAIVKL 264 SG S F + ++ I++ L F G +P W + FT L+ L+ +K Sbjct: 226 SGMKFSMFFIAEYSNMITVSALTATMFFGGWDLPFTQWDNVAPFTVLKTLVTLIAFALKT 285 Query: 265 VVGVLVIALFENSMARLRLDITPRITWA 292 + V ++ R R D + W+ Sbjct: 286 GFFIFVFMWVRWTLPRFRYDQLMSLGWS 313 >UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n=11 Tax=cellular organisms RepID=B2A053_OPITP Length = 307 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 23/223 (10%) Query: 6 PLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 P I+ ++ AP LL+G+ R AR+ +R+GP + Q + D++KL ++ + Sbjct: 3 PWIRLVLYLVAAPVVGGLLTGLDRRISARMQSRQGPPLAQPFYDVMKLWRKERI------ 56 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 V R + + L + G+ DL+ ++ +A FF + SP Sbjct: 57 -VVRKSQNFFILFFLLLVI-----FTGALFFAGSDLLLTIFALTLAAIFFVLGAYKVSSP 110 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 ++ +GA RE + + EPM+LL VAGS + I + L ++P V A Sbjct: 111 YSFVGAQRELIQMMAYEPMVLLTAIGMYMVAGSFYVHEIAR--HPTLLVTTLPGVFA--G 166 Query: 182 CAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMK 221 FA I+ K PFDL+ A QEL G +E+SG +++ Sbjct: 167 FLFALEIKFRKSPFDLSSSHHAHQELVRGITTEFSGRALALIE 209 >UniRef50_A2SQY6 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanomicrobiales RepID=A2SQY6_METLZ Length = 285 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 34/246 (13%) Query: 11 LVLFAV--APLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 L++FAV LL GI R AR+ R GP + QE +K +Q+ W+ R Sbjct: 7 LLIFAVFFGLLLHGIHRKVIARIQKRPGPPIWQEILHTLKFSFKQT-------WIPRTAS 59 Query: 69 YVMVGVMLTIA-----TALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 VM ++ IA AL V+ +G G L+ + + + + +GL +GSP+T Sbjct: 60 QVMYVAIVLIAIGIWTAALYVLWIG------GSLLLIFAFYMLHKIVEHGTGLSSGSPYT 113 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV-LALCAC 182 GA R M P LL+ + V G+ +IS I W + ++PL+ +AL A Sbjct: 114 KFGAIRSVMSAAAELP-LLVTVSVVYLFTGTLSISGIAG----WE-AANVPLIGIALPAA 167 Query: 183 AFATFIEMGKL---PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 I + K PF + EA +EL G +E+ G ++ +SLK V++ +F+ VF Sbjct: 168 ISLYLIILSKAHYGPFSVIEA-KELVSGYWTEHFGGWRALLNIALSLKTFVLISVFIVVF 226 Query: 240 I---PW 242 I PW Sbjct: 227 IGVLPW 232 >UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax=cellular organisms RepID=NU1M_ARATH Length = 325 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 15/205 (7%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVMVGVMLT 77 R A + R+GP G+LQ D +KL+ ++ + P ++ + +FR+ P V ++ Sbjct: 28 RKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAP-VATFMLSL 86 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLG 134 +A A+ G L L I LLYLFAI+ + I+G + S + +GA R A Sbjct: 87 VAWAVVPFDYGMVLSDLN--IGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRSAAQM 144 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLP 194 V E + L L GS N+S I + IPL L + E + P Sbjct: 145 VSYEVSIGLILITVLICVGSCNLSEIVMAQKQ--IWFGIPLFPVLVMFFISCLAETNRAP 202 Query: 195 FDLAEAEQELQEGPLSEYSGSGFGV 219 FDL EAE EL G EYS GF + Sbjct: 203 FDLPEAEAELVAGYNVEYSSMGFAL 227 >UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bilobella aurantiaca RepID=B5KMD2_9HEXA Length = 308 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 36/286 (12%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R + R+GP GVLQ D +KL ++ P +++ W++ L+P M ++ Sbjct: 27 VERSVLGYIQLRKGPNKVGMMGVLQSIGDAVKLFSKEQFFPFNSNAWMYTLSPIFMFVIV 86 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 L + P ++ S + ++G ++ Y + F G + S + +GA R V Sbjct: 87 LLMWMIAPSMSEYSGM-EVGVVLFFCYSSFVIYGMFG-GGWASNSKYAMLGAMRGVAQAV 144 Query: 136 LVEPMLLLGLWVAAQVAGSTNIS---NITDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 E L+L V + G+ ++S N+ T+ L +P+VL + A E + Sbjct: 145 SYEVSLMLYFLVLVVMMGTLDLSSYMNLRSTLS--VLIMFLPMVLIWVSLMMA---ETNR 199 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVM----KWGISLKQLVVLQMFVGVFIPWGQMETF 248 PFD AE E EL G EYS GF ++ GI +++ MF G G+M Sbjct: 200 TPFDFAEGESELVSGFNVEYSSGGFALLFLAEYAGIIFMSYLMIWMFFG-----GEMHL- 253 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 LV++++ ++V + I + S RLR D + W + Sbjct: 254 --------LVVSMMGILVCFMFIWV-RGSFPRLRYDKLMELAWKSY 290 >UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY0_FIBSS Length = 373 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 26/222 (11%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 AP+L + R A + R GP G LQ D+IK+L ++ P A +F L P Sbjct: 59 APILIYMERKVCAHVQCRLGPMRLGWHGTLQTIADVIKMLFKEVYAPSGADKLMFYLAPL 118 Query: 70 V------MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + +V ++ L V V +P LI + F + + G + + ++ Sbjct: 119 IVLIAPFIVCALIPFDKNLVVADVSMGIP----LIIAVNGFGVLGIL--LGGWSSNNKYS 172 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT----DTVYHWPLSQSIPLV--L 177 +GA R + E + L ++GSTN+ +IT T++ W + + IP++ + Sbjct: 173 LLGALRSGAQMISYEISFAMILLFVVMISGSTNLMSITMGQEGTIFDWWIFK-IPVLGFI 231 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 A ++ EM + PFD+AEAEQEL G +EY+G+ F + Sbjct: 232 AFILFFISSTAEMNRAPFDIAEAEQELTGGYHTEYNGTPFAM 273 >UniRef50_A2STX8 Ech hydrogenase subunit B n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX8_METLZ Length = 289 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 48/303 (15%) Query: 1 MSVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVG 56 M +++ L+ A+ +AP LL+G RV AR +R GP LQ + D+ KL ++ Sbjct: 1 MDIMF-LVGAVAFLILAPIFGGLLTGCDRVLTARFQSRVGPPFLQPFYDVAKLWHKEKAF 59 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + V ++ T A L +V G G + +++ A+A F ++ Sbjct: 60 SNP------------VEIIFTTAYLLLIVFTGMMYATGGSFLFVVFSLALAHTFLILAAY 107 Query: 117 DTGSPFTAIGASREAMLGVLV-EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 +PF+ IGA RE +LGV++ EP+L+L V+GS ++ L+ +P Sbjct: 108 AANAPFSNIGAERE-LLGVMIAEPILILLAVGFYMVSGSFETFHM--------LTLDVPG 158 Query: 176 VLALCACAFATF----IEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 ++ L A +++ K PFD++ A QEL +G + SG ++ + Sbjct: 159 IVYLPGVFIALIAVLTLKLRKSPFDISTSHHAHQELVKGVTTSLSGRSLAKVEIAHWYEM 218 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 ++ L M + I + +A ++LA ++ IV +N R+ +T + Sbjct: 219 MIFLSM---ILIFFANYPGLSAIAIVLAFLLEIV-----------IDNVFPRVTWKMTVK 264 Query: 289 ITW 291 W Sbjct: 265 SLW 267 >UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA02_NAUPA Length = 319 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 18/273 (6%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIAT 80 + R+ ARL R GP + Q + D++KL ++ + P DA VF+ P + ML + Sbjct: 26 SLERIVVARLQGRVGPPIYQNFIDVVKLFNKEILIPKDAKESVFKYAPLIGFAGMLAMLY 85 Query: 81 ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 +P+ V DLI L+Y+ A+ + G + SP+ AI +RE L ++ E + Sbjct: 86 FIPIPGVYEGSGVNSDLILLIYVMALPAIAHILGGGASSSPYAAIAVNRELKLMLVYEMV 145 Query: 141 -LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI-------PLVLALCACAFATFIEMGK 192 +++ +A V + ++ + + S P V+A AT +E+ Sbjct: 146 FVIIAFSIALYVGHGDAVFSLKKIMQYQQTHGSFLLDWKFWPAVIAFVIFVLAT-LELP- 203 Query: 193 LPFDLAEA-EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 PF +A + ++ +G L E+S + + +LK +++ +F F P A Sbjct: 204 -PFQIAHHNDADVMDGFLIEHSSIPLAIYEMTDALKIVLLSIVFQIFFFP-----VVIAD 257 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +L L+ I K VV V+ +L + R+D Sbjct: 258 DAMLNLLWFIAKTVVFVMFFSLIHAILPSYRID 290 >UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Gammaproteobacteria RepID=C8PVU9_9GAMM Length = 351 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 41/316 (12%) Query: 2 SVLYPLIQALVLF----AVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S+++ +Q++V+F A L+ R A +R GP G LQ D++K+ Sbjct: 25 SIVFLAVQSIVIFLAVVIFAALMIPYERRMLALWQDRYGPNRVGWQGSLQVAADMLKIFF 84 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---ITLLYLFAIA 107 ++ P A ++F L P + ++ TAL + P LG I +L+ FA+A Sbjct: 85 KEDWTPKFADKFIFVLAPAI------SLFTALAAYIIVPVTPSLGGADWSIGILFFFAMA 138 Query: 108 R---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT- 163 + G + + + +G R A + E L L L +AGS N+ +I + Sbjct: 139 GLAVYAVMFGGWASANKYALLGGLRSAAQTISYEVFLGLSLMGVVALAGSFNLRDIVYSQ 198 Query: 164 ---VYHWPLSQSIPLVLALCACAFATFIEMG-----KLPFDLAEAEQELQEGPLSEYSGS 215 +HW + I F TF+ G + PFD EAEQEL EG EYSG Sbjct: 199 AGGFWHWNVFGQI--------LGFLTFMVAGVAVTHRFPFDQPEAEQELAEGYHVEYSGM 250 Query: 216 GFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFE 275 FG+ G + ++V + +F G + F + ++ ++K + + + L Sbjct: 251 KFGMFFVGEYVNIVLVSSLITILFFG-GWLPLFDGLSFIPPIIWFMLKTLFFMTMFVLAR 309 Query: 276 NSMARLRLDITPRITW 291 ++ R R D W Sbjct: 310 GALMRPRYDQVMNFGW 325 >UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ42_THEPD Length = 322 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 24/229 (10%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV----FRLTPYVMV 72 + R AR+ R GP G+LQ D KLL ++ + P GW FR+ P + V Sbjct: 27 LERKVTARIQRRVGPLYAGPHGLLQPVYDFFKLLLKEEIVP---GWTDVFTFRVAPILAV 83 Query: 73 GVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAM 132 + + LPV + L GD + L A+ +++G SP+TAIG R + Sbjct: 84 TIPVFGMCVLPVASTKGLLSFEGDFALVFLLLALGVLTLSLTGYSVLSPYTAIGVGRLLV 143 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNI-TDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E + LL L AA A + + I H L P+ LA A +E Sbjct: 144 QYSMYEGVFLLSLASAALQAKTMSFEGILAYQESHGFLGLYQPVSLAAALVALLAKLE-- 201 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMK--------WGISLKQLVVL 232 K PFDL A+QE+ G ++E SG G M+ WGI+L +V L Sbjct: 202 KRPFDLPHAKQEVVAGWMTELSGRGLAFMRLYEDLSMVWGIALIVVVFL 250 >UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=cellular organisms RepID=NUOH_VESOH Length = 357 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 23/200 (11%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G LQ D +KL+ ++ + P A+ ++F L P +L IA A+ V V P Sbjct: 64 NRVGPKGWLQPIADALKLMTKEIIFPTKANIYLFLLAP------VLAIAPAIAVWAV-IP 116 Query: 91 LPQ---LGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 + + +L I+LLY+ AI + ++G + S + +GA R A L V E ++ Sbjct: 117 FDESIYITNLDISLLYVLAIGSIGVYGIILAGWASNSKYPLLGALRSAALLVSYEIVIGF 176 Query: 144 GLWVAAQVAGSTNISNITDT----VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAE 199 L +AGS N++ I + +W IPL + ++ +E + PFD+ E Sbjct: 177 ALVTVVMIAGSVNLNTIVQAQQGGIIYW---YFIPLFPIMIIFFISSLVETNRAPFDVVE 233 Query: 200 AEQELQEGPLSEYSGSGFGV 219 E E+ G EYSG F V Sbjct: 234 GESEIVGGTHVEYSGMTFAV 253 >UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-like) n=2 Tax=Euryarchaeota RepID=Q0W6T3_UNCMA Length = 313 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 44/300 (14%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGP--------------GVLQEYRDIIKLLGRQ 53 I + F V LL+ R AR+ +RRGP VLQ DI+KLL ++ Sbjct: 7 INPFIAFGVGILLAFNMRKVFARIQSRRGPLVWMPGAWHDINRTKVLQPLYDILKLLSKK 66 Query: 54 SVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 ++ P + F + P ++ ++ +A L V G L+ + YL I Sbjct: 67 TILPATATPFFTIGP--IIALVFALALTLFVPVAGLAFDYSFSLVIIFYLLIGVTMCIII 124 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S F AIG RE L + E +LG + A + ++ + P Sbjct: 125 GGTASASLFAAIGGVREIELMLANEIPFILGTFALAITYDTLSVQGMMG-----PNLLLN 179 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P A A +++ PFD+AEA+ E+ G +EYSG GV++ L + Sbjct: 180 PFAAAAFFIAM--LVKLHVRPFDIAEADSEIVGGLTTEYSGKLLGVLEITKVLMLFSLSA 237 Query: 234 MFVGVF--IPWG-------QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +FV +F +P G F AG ++++ I IV ALF AR R+D Sbjct: 238 LFVDLFLWVPKGWTLPGVASWALFLAGAFVVSVAIGIVN--------ALF----ARFRID 285 >UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobaceae RepID=A4YHY6_METS5 Length = 352 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 140/324 (43%), Gaps = 51/324 (15%) Query: 6 PLIQALVLFAVAPLLSGI--TRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSV 55 P+I ++F LL+ I R A AR+ R GP G LQ D +K + + + Sbjct: 19 PIILPGLIFTAILLLTTIWFERKAAARVQMRIGPYYASKRLGGYLQLVADALKFVFSEVI 78 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPVVTV---GS-----------PLPQLGDLI-- 98 P+ + +F LTP ++V + +PV + GS P LG L+ Sbjct: 79 VPEGVNPTLFALTPVLVVAMSFLPLAVIPVSVIPPSGSIFSIYFHDFYDPNVGLGVLVGL 138 Query: 99 ----TLLYLFAIARFFFAISGL---DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQV 151 +L + AI + A+ L T + F +GA RE+ L V + +LL+ A Sbjct: 139 FTQYNMLLILAIESIYPAMIILMAWSTNNRFAIVGAVRESYLSVSYDVLLLMSTISMALE 198 Query: 152 AGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM----GKLPFDLAEAEQELQEG 207 + ++ I T +P +LA A FI M + PFD+AEA+ EL G Sbjct: 199 YHTLDLVKIVQT--------GVPGILANPLAAVTFFIAMIIGSARFPFDIAEADTELVLG 250 Query: 208 PLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVG 267 P +EYSG F + G + V +F +F+ WG G LL ++ A + + Sbjct: 251 PATEYSGLLFVLTMAGSYVGNFVYALVFTDMFL-WGWYPLSGFPGALLTVIKASILVFFS 309 Query: 268 VLVIALFENSMARLRLDITPRITW 291 V + +++ R RLD R +W Sbjct: 310 VFLRSVY----GRYRLDQALRGSW 329 >UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchaeota RepID=A9A348_NITMS Length = 432 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 26/234 (11%) Query: 23 ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGV 74 + R A+L R GP G+LQ D +KL+ ++ + P A +F P + V Sbjct: 102 VERKMLAKLQLRVGPFYCGKIEGILQLMGDGLKLISKEIIIPAKADKPIFWAAPVIFVAT 161 Query: 75 MLTIATALPVVTVGSPLPQLGDL-ITLLYLFAIARFFFAI---SGLDTGSPFTAIGASRE 130 +PV +P + D+ + LL +FA+ FF I S S F IG R Sbjct: 162 AAAFVALIPV----APGWVVADVDLGLLGVFAVIGFFPIITILSAWSANSKFPFIGGIRA 217 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-- 188 V E L+L L + G+ N+S I + + P ++ L A FI Sbjct: 218 LFQMVSFEIPLILSLLGVVILTGTLNLSEIAAS------QSNFPWIIFLPVGAIVFFITM 271 Query: 189 --EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 E+ ++PFDL EAE E+ G L+E+SG +G+++ G LK +FV +F+ Sbjct: 272 LAELERIPFDLPEAESEIVAGWLTEFSGMMYGLVQLGTYLKLYAFAGLFVVLFL 325 >UniRef50_B1ZSE0 Respiratory-chain NADH dehydrogenase, subunit 1 n=6 Tax=Bacteria RepID=B1ZSE0_OPITP Length = 349 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 115/251 (45%), Gaps = 14/251 (5%) Query: 1 MSVLYPLIQALVLFA-VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDA 59 M + + LI L L+ +APL+ GI +A + RRGP VLQ Y D+ +L + V Sbjct: 1 MRLAFDLIFRLALWLLIAPLIPGIINKVKAWVAGRRGPPVLQLYYDLGRLWQKGVVLSTV 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 P + + A LPV ++ S + GD +YL A+ARF + LDTG Sbjct: 61 VSPGHVTGPAIAWVALAGAAMLLPVGSLWSTVVFRGDAFLFIYLLALARFCTVSAALDTG 120 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S F +GA+RE V+ E L+ GL A+ +GS ++ + L+ S AL Sbjct: 121 SAFEGMGAAREVSYAVIAEAALIAGLLALARQSGSLALAEM--------LAPSAGAGAAL 172 Query: 180 CACAFATFI--EMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 T + E ++PFD EL E + ++SG + G +LK L+ + Sbjct: 173 LGAGLFTVLLAENSRVPFDDPNTHLELTMVHEAMVLDHSGPPLAAILHGAALKLLIFSVL 232 Query: 235 FVGVFIPWGQM 245 +P G++ Sbjct: 233 LAEAVLPIGKL 243 >UniRef50_A3DKI3 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Staphylothermus marinus F1 RepID=A3DKI3_STAMF Length = 329 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 31/296 (10%) Query: 10 ALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV 63 AL +F++A + R AR+ R GP G+LQ D+ KLL + + Sbjct: 17 ALFIFSLALFTEYLFRKLSARMQKRMGPTYVGPAGILQPLYDLWKLLHVKEEVVNKYSMP 76 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIA---RFFFAISGLDTGS 120 + ++G+ IA LP+ + SPL GD L+Y++ F + L Sbjct: 77 MLAKIFGLLGLSAAIAV-LPLFPL-SPLRIYGDYDFLVYMYICCLWIPFMMILMSLSMPG 134 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI-------TDTVYHWPLSQSI 173 P+T++G SR + EP L V + S N S I + +W + Sbjct: 135 PYTSVGVSRILTFVTICEPAYFTALLVPVAIT-SKNASPIYSVFTASKNIWQYWINPYTF 193 Query: 174 PLVLALCACAFATFIEMGKL-PFDLAEAEQELQEGPLSEYSGSGFGV----MKWGISLKQ 228 PL+L A + G L PF++ EAEQE+ G +E+SG G+ I++ Sbjct: 194 PLLLLALISAIVSLQAKGMLQPFNIPEAEQEIIAGFETEFSGPILGIGRLLHDLDITITI 253 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 + ++ + +G P+ + + ++I + K + VL++A+ +N+ R R++ Sbjct: 254 IAIVYILLGGPYPYPHLS-------IPGVIILVAKYLGIVLLVAIVKNAFGRYRIE 302 >UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=Anaeromyxobacter RepID=NUOH_ANADE Length = 413 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 95/336 (28%), Positives = 148/336 (44%), Gaps = 46/336 (13%) Query: 10 ALVLFAVAPLLSGIT-----RVARARLHNRRG------PGVLQEYRDIIKLLGRQSVGP- 57 AL+L + ++SG+T RV+ AR+ +R G G Q D +KLL ++ + P Sbjct: 33 ALILVSFGAVISGMTVWWEMRVS-ARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIPA 91 Query: 58 DASGWVFRLTPY-VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA---I 113 DA +FR PY V+VG L ALP G L + + Y+ A+ + Sbjct: 92 DADRLLFRAAPYFVLVGFALVF-VALPF---GESLIAADLNVGIFYITAVTALVVVGILV 147 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + G R A + E L + V ++G+ ++ I + WP Sbjct: 148 AGWSSNSKWALFGGMRSAAQVISYEIPAGLAVMVPVLMSGTLSMQGIIRSQGAWPWEWH- 206 Query: 174 PLVLALCACAFATFI-----EMGKLPFDLAEAEQELQEGPLSEYSGSGFG---VMKWG-- 223 L AFA F E + PFDL EAE EL G LSEYS F ++++G Sbjct: 207 ALTNPFAMVAFAIFFVAQLAEGNRTPFDLPEAESELVAGYLSEYSAFRFALFFLVEFGNL 266 Query: 224 ISLKQLVVLQMFVGVFIPWGQMETFTAG------------GLLLA-LVIAIVKLVVGVLV 270 + + V F G +P+ E F A GL LA +++ + K +V + V Sbjct: 267 WVMSAISVTLFFGGWQVPFAGPEVFAAARGAGDLPGLAWWGLQLASMLVFVAKTLVLLNV 326 Query: 271 IALFENSMARLRLDITPRITWAGF-GFAFLAFVSLL 305 + ++ R+R+D + W FAF+ FV+ L Sbjct: 327 VVWVRWTLPRIRVDQMMSLCWKYLVPFAFVCFVATL 362 >UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=Bacteria RepID=NUOH_DEHSC Length = 353 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 23/198 (11%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYV-MVGVMLTIATALPVVTVGS 89 NR GP G+LQ D IK+L ++ + P +A VF L P V V VML A A+P G Sbjct: 44 NRAGPFGLLQPIADAIKVLIKEDIIPSEADKGVFWLAPLVAFVPVMLMFA-AIPFAD-GV 101 Query: 90 PLPQLGDLITLLYLFAIARFF---FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLW 146 L L I +LY+ A++ ++G + + ++ +GA R V E L+L + Sbjct: 102 MLVDLN--IGILYILAVSSVTVIGIFMAGWSSNNKYSLLGAMRTIAQEVSYEIPLVLSIL 159 Query: 147 VAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-----EMGKLPFDLAEAE 201 + GS +++ I +Q +P +L L F ++ E+ + PFDL EAE Sbjct: 160 GVVMLTGSLSMNEIVK-------AQDVPFIL-LQPLGFFVYLSAAMAEVNRTPFDLLEAE 211 Query: 202 QELQEGPLSEYSGSGFGV 219 E+ G +EYSG FG+ Sbjct: 212 SEIIAGFHTEYSGMKFGL 229 >UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH1_SYMTH Length = 328 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 26/265 (9%) Query: 34 RRGP-GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL 91 + GP GVLQ D+IK+L ++ + P+ A ++RL P + L + +P GS Sbjct: 47 KVGPWGVLQPIADVIKMLFKEDIMPEQADPLIYRLAPVIAFFCALGVWVVIPWAPRGSWW 106 Query: 92 PQLGD----LITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 + D ++ +L + A+ + A+ G + + + +G+ R + E + + L Sbjct: 107 SSMADPNAGVLVILAIAAMGVYGTALGGWASQNKYGLLGSMRATAQMISYELAMAMSLLG 166 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 + GS ++ +I D + + P L A+ E G PFDL E+E EL G Sbjct: 167 VILMTGSVSMYDIVDAQRN--MINLFPQFLGFLVFYIASLAEAGWTPFDLPESETELVAG 224 Query: 208 PLSEYSGSGFGVMKWGISLKQL--------VVLQMFVGVFIPWGQMETFTAGGLLLALVI 259 ++Y G FG+ L +L + F+G + PW + ++ V Sbjct: 225 YHTDYGGMRFGL----FFLTELTHAVNSAVLSTTFFLGGYNPWFGLT------MIPGFVW 274 Query: 260 AIVKLVVGVLVIALFENSMARLRLD 284 ++K+++ V V+ + + R R D Sbjct: 275 FLLKVILMVFVLYWIKCTFPRFRYD 299 >UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=cellular organisms RepID=NUOH_PSYWF Length = 348 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 17/197 (8%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G LQ D++K+ ++ P A ++F L P V + L +PV SP Sbjct: 64 NRVGPWGSLQLVADMLKIFFKEDWTPKFADKFMFILAPAVAMFTALASFAIIPV----SP 119 Query: 91 LPQLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLW 146 + + D I +L+ FA+A + G + + ++ +G R A + E L L L Sbjct: 120 MLGVADWNIGILFFFAMAGMAVYAVMFGGWASQNKYSLLGGLRSAAQTISYEVFLGLSLM 179 Query: 147 VAAQVAGSTNISNIT----DTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 + GS N+ +I +HW + P L A + PFD EAEQ Sbjct: 180 GVVAMTGSFNLRDIVVAQQGGFWHWNI---FPQFLGFLTFVVAGVAVTHRHPFDQPEAEQ 236 Query: 203 ELQEGPLSEYSGSGFGV 219 EL EG EYSG FG+ Sbjct: 237 ELAEGYHVEYSGMKFGM 253 >UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U4_ACIFD Length = 420 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 33/284 (11%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYV-MVGVMLTIATALPVVTVGS 89 NR GP G+LQ D IKL ++ + P+ S ++F+L PY+ +V LT +V +G Sbjct: 55 NRAGPFGLLQSLADGIKLFFKEDLIPERSDRFIFKLAPYLSLVPAFLTFT----IVPIGG 110 Query: 90 PLPQLGD------------LITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 + G ++ LL + +I+ + ++G +GS + IG+ R + + Sbjct: 111 VVDLFGHRTELQVADPPIGILLLLAMSSISVYGVMLAGWSSGSKYPLIGSVRASAQMISY 170 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDT--------VYHWPLSQ--SIPLVLALCACAFATF 187 E + L + V GS + ++ + HW L + IP V+ + A Sbjct: 171 EAAMGLSIAAVVLVTGSLSTRDMVTGQLGTYLGFIPHWNLIRLGVIPFVIFIVAIT---- 226 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET 247 E+ + PFDL EAEQEL G +EYS F + L + + + V +F Sbjct: 227 AEVNRPPFDLVEAEQELVGGFHTEYSSIRFALFYLAEYLNTITMSAIMVTLFFGGPDGPD 286 Query: 248 FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 L +V +VK + ++ F ++ RLR D + W Sbjct: 287 PHVLHWLWPIVWFLVKTSIFFVIYVWFRAALPRLRYDQLMDLGW 330 >UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidetes RepID=D2QGQ8_9SPHI Length = 384 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 34/235 (14%) Query: 11 LVLFAVAPLLSGITRVARARLH---------NRRGP-GVLQEYRDIIKLLGRQSVGP-DA 59 LV+F + L++ + A ++ NR GP G+LQ D K+ ++ P A Sbjct: 14 LVIFGITLLIATYSTYAERKVAAFLQDRLGPNRAGPWGLLQPIADAGKMFFKEDFIPSQA 73 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGS---------PLPQLGDLITLLYLFAIAR-- 108 S W+F L P + MLT + V+ G P+ + I +LY+F + Sbjct: 74 SKWLFILGPCL---AMLTALMSSAVIPFGDSIRFDNYSIPVQGIEINIGVLYIFGVVSLG 130 Query: 109 -FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD---TV 164 + + G + + F+ +GA R A + E L L + + GS ++ I D + Sbjct: 131 VYGIMVGGWASNNKFSLLGAIRAASQNISYEIALGLSMIAILMMTGSLSVRAIVDQQASF 190 Query: 165 YHWPL-SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 + W + +Q + V+ L CAFA E + PFDL E E EL G +EYS G Sbjct: 191 FEWNIFTQPLGFVIFL-TCAFA---ECNRTPFDLPECETELVGGYHTEYSSMKLG 241 >UniRef50_B5Y905 Hydrogenase-4 component C n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y905_COPPD Length = 316 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M V+Y L+ L+L A L+ GI R ARL R GP Q D +KL ++ S Sbjct: 1 MKVVYWLLWILLLSIWALLVGGIDRKIVARLQGRYGPPFWQNITDFVKLFYKKGKVASRS 60 Query: 61 GWVFRLTPYVMVGVMLTIA-TALPVVTVGSPLPQL---GDLITLLYLFAIARFFFAISGL 116 + VM V +A + LP G L GDLI Y FA+ + + G Sbjct: 61 ALMVVDAALVMGIVAAVLALSVLPFPMAGGYFQLLSTNGDLIIFAYAFALMAMVYVLIGF 120 Query: 117 DTGSPFTAIGASRE-AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP---LSQS 172 SP+T +GASRE +ML P +LL + + + T + ++++ +++S Sbjct: 121 GGKSPYTLVGASREISMLLSYEVPFILLIVALGYRAVFVTGLP--VESIFSMSALLVAKS 178 Query: 173 IPLVLALCACAFATFIEM--------GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 L + TF+ + G +PFD+ EAE E+ +G +E G V+ +G+ Sbjct: 179 QLGTLLMDPIFLGTFLVLLVLGPAIVGSVPFDIPEAETEIVDGYGAELHGPRLAVL-FGL 237 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSM-----A 279 +L+ F+ W + +G + + L + + G L++A+ N++ Sbjct: 238 KHMKLIAYSYFL-----WMVFVSPASGNVFVNL----LSTLFGTLLVAIIINTIPRAVSG 288 Query: 280 RLRLD 284 R R+D Sbjct: 289 RFRID 293 >UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L371_KORCO Length = 333 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 35/289 (12%) Query: 23 ITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVG 73 + R A++ R GP GV+Q D+I+ L ++ V P + F LTP + G Sbjct: 34 LERKIAAKVQLRYGPLYVLKPLGGVIQTIADLIRYLFQEPVIPKEVDKAAFLLTPVFLFG 93 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 + +P+ L+ L L +A F I G + + F+ IG+ RE L Sbjct: 94 LAYLPLVMIPISPAYYAFRSDLSLLIALALTTLAPIFTLIMGWASNNKFSLIGSVREGYL 153 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDT------VYHWPLSQSIPLVLALCACAFATF 187 E + L A + S ++ I + V+ P++ + LVL + Sbjct: 154 VTSYEIPIFLSALSMAVLYNSLDLVEIAEAQRRIWGVFLNPIAAANMLVL--------IY 205 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ-----MFVGVFIPW 242 + K PF++ EAE E+ GP +EYSG +G++ G S +L VL +F+G + P Sbjct: 206 MSTSKFPFEIPEAESEIVAGPYTEYSGIIYGLVM-GASYIKLYVLSLIYSILFLGGWNPS 264 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + F +GG+L + A + + G + A++ R R+D I W Sbjct: 265 PSPDPFISGGVL--FLKAFILVAFGAFLRAVYP----RFRIDQAVNIGW 307 >UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DD3 Length = 400 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 36/288 (12%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLT 77 R AR+ +R GP G+LQ D +KL+ ++ V P A+ +FR PY+ Sbjct: 45 RKVSARMQDRLGPTRVGPFGLLQSLADGVKLIAKEDVAPQAADKLLFRAAPYIAFCASFC 104 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLG 134 ALP GS + ++ A+ F ++G + S ++ G REA Sbjct: 105 GFLALPF---GSQFVAQNLSVGAFFVLAVLSSEVFGIVLAGYASASKWSLFGGVREAAQV 161 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNI---------TDTVYHWPLSQSIPLVLALCACAFA 185 V E + + V +AG+ N++ I V+H P + V + A A Sbjct: 162 VSYEVPRAMCVVVPVCLAGTLNLNTIGAQQVGWFWNWNVFHDPFTFVAFFVFFITAVA-- 219 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSG--------SGFGVMKWGISLKQLVVLQMFVG 237 + PFDLAEAE EL G +EYSG + +G M L L+ L + Sbjct: 220 ---SCKRAPFDLAEAESELVAGFHTEYSGIRWSYFFLAEYGSMFAVSGLAALLFLGGWHS 276 Query: 238 VFIPWGQMETFT-AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +P+ F G +L + + + K VLV+ S+ RLR+D Sbjct: 277 GVLPFEPSVEFGFWPGTVLNVAVFVGKCWALVLVMIWMRWSLPRLRID 324 >UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH2_SYMTH Length = 394 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 38/230 (16%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-A 59 L+ L+ F + +L R A + NR GP G +Q D+IKL ++ + P+ Sbjct: 26 LVWGLINFYLCLMLE---RKLSAWMQNRVGPWRVGLWGWIQPVADLIKLWVKEYIRPNNV 82 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFA------IARFFFAI 113 W++ + P++ ++ +V G L I ++++ A IA F + Sbjct: 83 DKWLYLIAPFIG---FVSANLVWLIVPFGDKLIATDFEIGIIFIAAVMGYDVIATF---M 136 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS- 172 +G + + ++ +GA R A + E +++ + +AGS +S+I L+Q Sbjct: 137 AGWGSNNKYSMLGAMRGAAQLISYEVTMVMAVIGVVMMAGSLRLSDIV-------LAQQQ 189 Query: 173 --------IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 P ++ A+ E+ + PFDLAEAEQEL G +EYSG Sbjct: 190 RGFLGWFLFPQIIGFIVYLIASLAELNRAPFDLAEAEQELVAGHHTEYSG 239 >UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=Helicobacter RepID=C5EY55_9HELI Length = 335 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 27/235 (11%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWV 63 L+ A+A + I R A R GP GVLQ D IKL ++ + P A+ + Sbjct: 17 LIFSALAGFATYIERKMLAFFQRRLGPMVVGPFGVLQILADGIKLFTKEDIVPSGANRLI 76 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPL-----PQLGDL-ITLLYLFAIAR---FFFAIS 114 FR+ P + +P P + D+ + +L++ + + ++ Sbjct: 77 FRIAPVITAATAFIAMAPIPFFPEFEIFGRVVQPIIADINVGILFVLGVGAAGLYGPLLA 136 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD----TVYHWPL- 169 G+ S ++ +GA+R A+ + E + L L + GS ++ +I + ++ +W + Sbjct: 137 GISANSKYSLLGAARTAIQLLSFEVVSGLSLLAPIMLVGSLSLIDINNYQEGSITNWLIF 196 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 SQ + VL L A +A + E+ + PFDL E E E+ G +EY+G M+WG+ Sbjct: 197 SQPLAFVLFLFA-GYAGYAELNRTPFDLLEHEAEVVAGYATEYAG-----MRWGM 245 >UniRef50_C5CEV6 Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV6_KOSOT Length = 303 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 23 ITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTIATA 81 + R A +R GP Q + D+ KL G++S+ P+ S V + L P V + T++T Sbjct: 25 LERKLSALFQHRVGPPWYQNFLDVFKLFGKESIVPELSASVVYVLAPIVSFSTVTTLSTV 84 Query: 82 LPV-VTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 L V +G + GD+I ++YL + + + + + IGASRE L +L+ Sbjct: 85 LGCAVFLGIRIA--GDVILIIYLLILCSMATFLGAAASRNVYAGIGASRE--LKMLLADE 140 Query: 141 LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 L+L + + V S N+ +Y P SI V+A ++ PFDL EA Sbjct: 141 LVLIMVILVPVVKSGFDFNLLRLIYGSPAITSISGVIAYILGLVCIQAKLAIQPFDLPEA 200 Query: 201 EQELQEGPLSEYSGSGFGVMKWGISLK 227 E EL G EYSG G+ K +K Sbjct: 201 ETELAGGVEIEYSGVLLGLWKLSKGMK 227 >UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=cellular organisms RepID=NUOH_XYLF2 Length = 363 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 27/205 (13%) Query: 31 LHNRRGP-----GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIA---TA 81 +H R GP G+ Q + D+ KLL ++ + P A +F + P +LT+A A Sbjct: 57 MHVRHGPMYVGMGLFQAFADVFKLLFKEVLYPSKAHKAIFVIAP------LLTLAPSFAA 110 Query: 82 LPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVE 138 VV + L + LLYL A+ + ++G + S + +GA R A V E Sbjct: 111 WAVVPFDTKLVLSNANVGLLYLLAMTSLGVYGIILAGWASNSKYAFLGAMRSAAQVVSYE 170 Query: 139 PMLLLGLWVAAQVAGSTNISNI------TDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 + L AGS N+S I + + W L PL + A E + Sbjct: 171 IAMGFALVGVMIAAGSLNLSQIVMAQAGSSGFFDWFLIPLFPLFIVYWVSGVA---ETNR 227 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGF 217 PFD+ E E E+ G + EYSGS F Sbjct: 228 SPFDVVEGESEIVAGHMVEYSGSVF 252 >UniRef50_Q8TY38 Membrane protein related to formate hydrogenlyase subunit 4 n=1 Tax=Methanopyrus kandleri RepID=Q8TY38_METKA Length = 283 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 22/273 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M VL L+ F V + G+ R AR+ R GP ++QE+ +K + ++ P S Sbjct: 1 MIVLETLVGITEAFLVGSVFLGLHRKVMARIQRRPGPPIVQEFLHTLKFMLKEGYAPLTS 60 Query: 61 G-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 +++ + P V ++ + A + V G+ LP L+A + +G+ +G Sbjct: 61 AEFLYWMVPVFNV-IIWSAAVTISAVYRGNLLP-------FFALYASYKVLSHGAGVSSG 112 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-HWPLSQSIPLVLA 178 S +T IG R A++ E L L A V G +++ I + H PL + IP Sbjct: 113 STYTKIGGVRHAIMPA-GELALACSLISAYFVTGHMDVTGILAWEHAHGPLIEHIP---- 167 Query: 179 LCACAFAT--FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A AF T +++ P D ++ ++ EG L+EY G G+M ++K L +F Sbjct: 168 FSALAFFTLLWVDSPYSPLDPSKG-YDIVEGYLTEYPGFLRGLMYVAEAIKYYCELWVFQ 226 Query: 237 GVFI----PWGQMETFTAGGLLLALVIAIVKLV 265 VF+ P + T LLLA + A+ ++ Sbjct: 227 AVFLGISDPVSHLLTMGVLTLLLASMCALTPIL 259 >UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=Firmicutes RepID=NUOH_DESHY Length = 351 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 19/199 (9%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G Q D +KLLG++ + P +A +F++ P + G+ + T +P + Sbjct: 71 NRLGPRGWFQTIADALKLLGKEDLTPANADRIMFKIAPMFIFGIPILTLTIIPFGYAMTV 130 Query: 91 LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQ 150 + + L + +++ ++G + + ++ +G R + E L+ L Sbjct: 131 IDLELGVFFYLGITSVSTLALLMAGWSSNNKYSLLGGMRAVAQMISYEIPLIFSLLGVVM 190 Query: 151 VAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-----EMGKLPFDLAEAEQELQ 205 + + N++ I + ++P + L AF F+ E+ + PFDL EA+QE+ Sbjct: 191 LTQTFNLTKIVEA------QAALPFIF-LQPIAFIIFLICGQAEVNRAPFDLLEADQEII 243 Query: 206 EGPLSEYSGSGFGVMKWGI 224 GP +EY+G ++WG+ Sbjct: 244 AGPFTEYTG-----LRWGL 257 >UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella RepID=C9LCZ0_9BACT Length = 366 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 29/203 (14%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPDASGWVFR-LTPY-VMVGVMLTIATALPVVTVGS 89 NR G G+LQ + D+ K+L ++ + S + P+ V+V MLT A Sbjct: 69 NRVGKWGLLQVFGDVFKMLTKEIIRMRNSDRLLHDFAPFLVVVASMLTFACL-------- 120 Query: 90 PLPQLGDLITLLYLFAIARFFFA-----------ISGLDTGSPFTAIGASREAMLGVLVE 138 P + G +I F I FFF ++GL + + ++ IGA R + E Sbjct: 121 PWNKGGHIID----FNIGIFFFIAVSSIGVVGILLAGLSSNNKYSLIGAMRSGAQLISYE 176 Query: 139 PMLLLGLWVAAQVAGSTNISNITDTVYH--WPLSQ-SIPLVLALCACAFATFIEMGKLPF 195 + L + + G+ IS I Y W + + IP + A A E + PF Sbjct: 177 VSIGLTMLTMVAMTGTMQISEIVQQQYDNGWNIVRGHIPALFAFIIYMIAGNAECNRGPF 236 Query: 196 DLAEAEQELQEGPLSEYSGSGFG 218 DL E E EL G +EYSG FG Sbjct: 237 DLPEGESELTAGYHTEYSGMHFG 259 >UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=cellular organisms RepID=NUOH_LEPBA Length = 356 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 35/288 (12%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G+ Q D IK + ++ + P + S ++ L P + M A V+ G Sbjct: 45 NRAGPFGIFQPLADGIKFIAKEEIFPKNVSKGMYLLAPTI---SMTCAIMAWAVIPFGGT 101 Query: 91 LPQLGDLITL-----------------LYLFAIAR---FFFAISGLDTGSPFTAIGASRE 130 LP L TL LY+ AI+ + I+G + + ++ +G R Sbjct: 102 LPAPEWLTTLTGVATIDLQIANPDSGVLYMLAISSLSVYGIMIAGWSSNNKYSLLGGVRS 161 Query: 131 AMLGVLVEPMLLLGLWVAAQV--AGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 + E L +GL + A V GS +++I+D+ S P +A A F Sbjct: 162 TAQMISYE--LPMGLSIVAIVIMTGSLKLTDISDSQKDMWNILSPPGFVAFFIYVTAMFA 219 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG-----ISLKQLVVLQMFVGVFIPWG 243 E +LPFDLAEAE EL G +EY F + I++ L L F G +P+ Sbjct: 220 ETNRLPFDLAEAESELVVGFHTEYGAFKFALFFLAEYMNMITMSCLTTLLFFGGYNVPF- 278 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 Q+ + + L I+K++ + ++ R R D ++ W Sbjct: 279 QLGAGSEYQAFIGLGFFILKVLFFAFLFIWVRWTLPRFRYDQLMKLGW 326 >UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Chlorophyceae RepID=Q9MGK1_SCEOB Length = 324 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 49/246 (19%) Query: 3 VLYPLIQAL-----VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 +LY LI L +L AVA L+ + R + R+GP GVLQ + D +KLL Sbjct: 2 ILYLLIMILATVVPLLLAVA-FLTLVERRVMGAMQRRQGPNAWGLFGVLQPFLDGLKLLL 60 Query: 52 RQSVGPDASGWVFRLTPYVMVGVMLTIAT------ALPVVTVGSPLPQLGDL-ITLLYLF 104 ++ + P ++ P + +LT T ALP T G+ + DL + +Y+ Sbjct: 61 KEPILPSSAD-----QPLFLWAPILTFLTSQIAWAALPTSTAGA----VRDLNLGTMYVL 111 Query: 105 AIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVE-PMLLLGLWVAAQVAGSTNISNI 160 A+ + + G + S + +G R + E PM L+ L A +A S N S + Sbjct: 112 AVGSLGVYGILLRGWRSNSKYAFLGCCRSVAQMISYELPMGLIVL-CACMIANSLNWSAL 170 Query: 161 TDTVYH-------WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYS 213 ++ + WPL+ L+ +C A E+ + PFDL EAE EL G EY+ Sbjct: 171 VESQQNGIFLLPLWPLA----LIWIICCLA-----ELNRAPFDLPEAEAELVAGYNVEYA 221 Query: 214 GSGFGV 219 GF + Sbjct: 222 SMGFAL 227 >UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Bacteroidales RepID=NUOH_AZOPC Length = 355 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 25/302 (8%) Query: 11 LVLFAV-APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-W 62 L+ +AV A LL + R A R GP G+ Q D+IK+L ++ + + Sbjct: 37 LIAYAVLALLLIYLERKVCAFFQCRLGPTRVGPWGIFQSVADMIKILLKELIRINKVDVC 96 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA---ISGLDTG 119 +F L Y+++ + A+P L + I + YL +++ ++G + Sbjct: 97 LFHLATYIVIIASICTFGAIPF---DKGLHVVDFNIGVFYLLSVSSIGVVGILLAGWASN 153 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT-VYHWPLSQS-IPLVL 177 + +T IGA R + E L L ++GS +S+I + W + + IP ++ Sbjct: 154 NKYTIIGAIRSGAQLISYELSCGLSLMTVVMLSGSLQLSSIVEQQSCGWNIVRGGIPAII 213 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A A E + PFDL EAE EL G +EYSG FG L ++ + Sbjct: 214 AFIIYLIAGHAETNRGPFDLPEAESELTAGYHTEYSGIQFGFFYLAEYLNMFIIAAIATT 273 Query: 238 VFIPWGQMETFTAGGLLLALVIA--------IVKLVVGVLVIALFENSMARLRLDITPRI 289 +F+ G M G L V+ VK + + + +M RLR+D + Sbjct: 274 LFLG-GWMPLHIPGWNLFNEVMDFIPSILWFFVKTFICIFLALWVRWTMPRLRIDQLLNL 332 Query: 290 TW 291 W Sbjct: 333 EW 334 >UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase subunit H n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ19_9DELT Length = 358 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 42/247 (17%) Query: 7 LIQALVLFAV-----APLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLL 50 L++ L +FAV AP+L+ + R A + +R G G+ D +K+ Sbjct: 9 LVKILFIFAVTVGFFAPVLTWVERKQSALMQDRIGANRADIMGFTFLGLFHIIADALKMF 68 Query: 51 GRQSVGPD-ASGWVFRLTPYV-MVGVMLTIATALPVVTVGSPLP--------QLGDL-IT 99 ++ PD A+ ++ ++P V +V +LT A VV G + DL + Sbjct: 69 TKEDFIPDGANKFLHTMSPIVALVPALLTFA----VVPFGGQYTLFDKEVNLVISDLDVG 124 Query: 100 LLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGS-- 154 LL++FAIA + + I+G + + ++ +G+ R A + E + L + V GS Sbjct: 125 LLFVFAIASLATYGYVIAGWSSNNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSMK 184 Query: 155 -TNISNITDTVYHWPLS-QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 T I I + + W + Q + + L A + E ++PFD EAE EL G +EY Sbjct: 185 LTEIGTIQENFWMWGIFLQPLGFFMFLTA----SIAENKRIPFDAPEAESELVAGYFTEY 240 Query: 213 SGSGFGV 219 SG FG+ Sbjct: 241 SGLKFGM 247 >UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pediculus humanus corporis RepID=B8Y962_9NEOP Length = 289 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL 91 N+ GP G+LQ D KLL + ++ P + W + P++ ML+++ P+ + Sbjct: 35 NKVGPIGILQPLSDAPKLLSK-TICPQSESWELFIMPFI--TFMLSVSWWYPLYFPKTLW 91 Query: 92 PQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQV 151 L+ L+++ +++ + +G S ++A+G+ R L + E + + A V Sbjct: 92 ESNNSLLILIFISSVSVYALIFTGSLPKSKYSALGSLRAITLSISFELVFSTAMLSMAVV 151 Query: 152 AGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI----EMGKLPFDLAEAEQELQEG 207 S +I + +QS+P ++++ + E G+ PFDL E+E EL G Sbjct: 152 FNSFSIKFMAT-------NQSVPNIISMIVVGILVWTSLIAECGRTPFDLPESESELVSG 204 Query: 208 PLSEYSGSGF 217 EY GS + Sbjct: 205 FNVEYGGSRY 214 >UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ51_THEPD Length = 337 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 20/208 (9%) Query: 25 RVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVML 76 R AR+ R GP GVLQ D + + ++ + P+ + V + + + Sbjct: 40 RKIAARVQMRVGPLYVTRHFGGVLQMLADGTRYMFQEFIVPETADKVPYMLAPALALTLA 99 Query: 77 TIATAL-PVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 AL P +P+ L LL + A + G + + F+ GA REA + + Sbjct: 100 IAPFALIPSAPGFAPVKSPYSLPALLAILASTPLSVLLMGWSSNNKFSIQGAVREAFMTL 159 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM----G 191 E L L A + GS ++ I Q +P L AF F+ M G Sbjct: 160 AYEVPLFLSALSMAILYGSMDLEEIVG-------RQFLPGALLNPVAAFTFFVAMVMSSG 212 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGV 219 +LPFD+ E EQE+ GP EY+G FG+ Sbjct: 213 RLPFDIVEGEQEIVAGPYVEYTGIVFGI 240 >UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=Bacteria RepID=NUOH_BREBN Length = 336 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 21/269 (7%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G+LQ D+ KLL ++ + P A +F L P + + +P T Sbjct: 54 NRVGPLGLLQTVADVAKLLLKEDIRPQHADKALFTLAPILAYAPAFAVLAVMPF-TDSIR 112 Query: 91 LPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 LG I LLY A I +G + + ++ IG R A + E L++ + Sbjct: 113 FADLG--IGLLYYIALSGITVLGVITAGWASNNKYSLIGGLRSAAQMISYEVPLVMSVVG 170 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 + GS N+ +I + + +P + A E+ + PFDL EAE EL G Sbjct: 171 IVLLTGSMNLKDIVEA--QRDVWNIVPQFIGFAVFIIAAQAELNRTPFDLPEAESELVGG 228 Query: 208 PLSEYSGSGFGVMK-----WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIV 262 EYSG F + + + L+ + +F G ++P F G +V I+ Sbjct: 229 YHVEYSGFRFAMFMLAEYVYMFGMGALITI-LFFGGWLPIHPSLDFIPG-----IVWFIL 282 Query: 263 KLVVGVLVIALFENSMARLRLDITPRITW 291 K V V + +M RLR+D W Sbjct: 283 KFSVYVFLQFWIRATMPRLRVDQLMSFAW 311 >UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_THET2 Length = 365 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 24/218 (11%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS-VGPDASGWVFRLTPYVMVGVM 75 I R AR R GP G+LQ D IK + ++ V A ++F L P + V Sbjct: 34 IERRLLARFQVRMGPNRVGPFGLLQPLADAIKSIFKEDIVVAQADRFLFVLAPLISVVFA 93 Query: 76 LTIATALPVVTVGSPL---PQLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGAS 128 L +P GS P + +L + +LYLFA++ + +SG +GS ++ +G+ Sbjct: 94 LLAFGLIPFGPPGSFFGYQPWVINLDLGILYLFAVSELAVYGIFLSGWASGSKYSLLGSL 153 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD--TVYHWPLSQSIPLVLALCACAFAT 186 R + + E L L L + GS N+++I + + W + P A A+ Sbjct: 154 RSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKEHGWLFLYAFP---AFLVYLIAS 210 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 E + PFDL EAEQEL G +EYS +KW + Sbjct: 211 MAEAARTPFDLPEAEQELVGGYHTEYSS-----IKWAL 243 >UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=Bacteria RepID=NUOH1_SOLUE Length = 397 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 29/239 (12%) Query: 7 LIQALVLFAVA----PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS-V 55 L++A V+F V L + R A + R GP G+LQ D+IKL+ ++ V Sbjct: 12 LVKAAVIFGVLMTTLAYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKEDLV 71 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALP---VVTVG--SPLPQLGDL-ITLLYLFAIAR- 108 P + ++ P++ + + L + +P V+ +G + Q+ DL I +L++ A++ Sbjct: 72 PPYVNKPLYLAAPFLAITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVSSM 131 Query: 109 --FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS------NI 160 + A++G + + ++ IG R + + E L + L +AA + S +S Sbjct: 132 GVYGIALAGWASNNKYSLIGGLRSSAQMISYE--LPMSLAIAAPLLISNTLSLRELVERQ 189 Query: 161 TDTVYHWPL-SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 ++ +W L S P V++ A F E ++PFDL EAE EL G +EYS F Sbjct: 190 AGSILNWNLLSGPFPQVISFIIFIIAAFAETNRVPFDLPEAENELVAGFHTEYSSMKFA 248 >UniRef50_A0L9R7 Membrane bound protein complex subunit mbxM n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R7_MAGSM Length = 301 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 8/222 (3%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLG-RQSVGPDASGWV 63 Y L+ ++ L++ + AR R G + Q Y DI+K + R S+ G + Sbjct: 10 YALLSLFIVLNYGLLMTALVTKIGARAGRRYGIPIYQNYIDILKNMALRTSL---THGVM 66 Query: 64 FRLTPYVMVGVMLTIATALPVV---TVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 F L P + + + +P++ + S GDL+ +LY A+ ++GS Sbjct: 67 FYLGPVFRLSGGVGLLLFMPLIFGSEMFSNFSFAGDLMLVLYFIFFGMLGMALGAGESGS 126 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSIPLVLAL 179 P AIG SR E L L ++ A + +I++I H W LA+ Sbjct: 127 PHAAIGVSRGLSQVTTSELPLALAVFAVALQYQTLSITDIVAAQQHGWTSWTLFTNPLAV 186 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 A F+ M + PFD+ A QE+ GP +EY S M+ Sbjct: 187 IAAMFSFLGSMMRPPFDIVLAPQEIPIGPPTEYHSSYLAAMQ 228 >UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Tax=cellular organisms RepID=NUOH1_ACIBL Length = 426 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 27/237 (11%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S L+ + LV+F VA L++ + R A + R GP G+LQ D +KLL Sbjct: 20 SPLWATVYILVIFGVASVAVMLMTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLI 79 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARF- 109 ++ + PD A ++F + P V VM+T T V+ G I +L++ I+ Sbjct: 80 KEDIVPDGADKFLFWMAP---VTVMMTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLG 136 Query: 110 --FFAISGLDTGSPFTAIGASREAMLGV---------LVEPMLLLGLWVAAQVAGSTNIS 158 ++G + S + +G R A V +V +++ L I Sbjct: 137 VLAVVMAGWSSNSKYALMGGLRSAAQMVSYEVAMGLAIVSVLMMTSLQTGTGTLSMIGIV 196 Query: 159 NITDTVYHWPLSQSIPL-VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 W + + P ++A A A E + PFDL EAE EL G +EYSG Sbjct: 197 QAQQAQGSWFIFKFFPTGLVAFVIFAIAMVAETNRAPFDLPEAESELTAGFHTEYSG 253 >UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_GRABC Length = 342 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 19/231 (8%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTI 78 R A + R+GP G+LQ + D K+L ++++ PD + V + ++ ++ I Sbjct: 42 RKVLAAIGLRKGPNVVGPWGMLQAFADAGKMLLKETIIPDGANKVLFILAPLLTFILAMI 101 Query: 79 ATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGV 135 A A+ V G + + + +LYLFAI+ + I+G + S + +GA R A V Sbjct: 102 AWAVVPVNDGWAVANIN--VGVLYLFAISSLGVYGVIIAGWASNSKYAFLGALRAAAQMV 159 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSIPLVLALCACAFATFIEMGKLP 194 E + + GS N++++ H W + +P+ + A E + P Sbjct: 160 SYEVSIGFVMVAILLCVGSLNLNDVVLAQKHVWFVLPMLPMAVIFFISGLA---ETNRSP 216 Query: 195 FDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM----FVGVFIP 241 FD+ E E E+ G + EYS + + G ++ M F+G ++P Sbjct: 217 FDIVEGESEIVAGHMVEYSAMAYALFFLGEYANMFMICAMTTLLFLGGWLP 267 >UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Bacteroidetes RepID=NUOH_FLAJ1 Length = 350 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 37/220 (16%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVMLT 77 R A L +R GP G+LQ D +KL ++ P+ + ++F + P + + L Sbjct: 32 RKVAAFLQDRVGPNRAGWGGLLQPLADGMKLFSKEEFFPNTPNRFLFVVGPAIAMSTALM 91 Query: 78 IATALPVVTVGSPLPQLG-DLI--------TLLYLF---AIARFFFAISGLDTGSPFTAI 125 + +P G L G D+I LLY+F ++ + I G + + F+ + Sbjct: 92 TSAVIPW---GDRLHLFGKDIILQATDVNIALLYIFGVLSVGVYGIMIGGWASNNKFSLM 148 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD-------TVYHWPLSQSIPLVLA 178 GA R A V E + L + + G+ ++ I++ V++ PLS I L+ Sbjct: 149 GAVRAASQMVSYEIAMGLSMIALLMMTGTMSLKVISEQQAGMNWNVFYQPLSFLIFLI-- 206 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 C+FA E + PFDLAE E EL G +EYS G Sbjct: 207 ---CSFA---ETNRTPFDLAECENELIGGYHTEYSSMKMG 240 >UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsilonproteobacteria RepID=B9L624_NAUPA Length = 323 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 40/289 (13%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLT 77 R A +H R GP G LQ D+ KLL ++S+ P A ++F + P ++ Sbjct: 31 RKTLAYIHKRVGPHFNGPAGTLQTIFDVFKLLTKESITPKSADPYLFNIIP-----IITP 85 Query: 78 IATALPVVTV-GSPLPQLGD--------LITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 + ALPV+ + +PL G ++ L+ L + F ++G + + ++ +G Sbjct: 86 LVAALPVILIPWTPLINNGHGILDTQYGVLGLVVLIGVEPFLLFLTGFGSNNKYSFLGGM 145 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 R + +E L A + G+ N+ I SQ+ L + FI Sbjct: 146 RILAQMLSMEAPFFLAALAPALLFGTMNLYEIQ--------SQNTWLTTLILLPGAVIFI 197 Query: 189 --EMGKL---PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 +G L PF + +AEQE+ G +EY+G+ + ++K+ + LVV V +F G Sbjct: 198 IAMLGILEQPPFHIPDAEQEIVYGFYTEYAGTNYVLLKFAEFTEMLVVSAAAVVLFFG-G 256 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 F L L IA++ +V+ + S RLRLD + W+ Sbjct: 257 YRGLFFDSFWWLFLKIALLAVVMVAI-----RASNPRLRLDQMLKFCWS 300 >UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=Arthropoda RepID=Q68RL2_9HEMI Length = 306 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/287 (21%), Positives = 106/287 (36%), Gaps = 30/287 (10%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVM 71 L+ + R + R+GP GV Q + D +KL ++ + + F L+P Sbjct: 21 FLTLLERKLLGYVQLRKGPDSVGLWGVFQPFSDALKLFSKEYIIVQKINFFPFWLSPVFS 80 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGAS 128 + V L + P + +++L++F + + ISG + S + +G Sbjct: 81 LFVSLAVWFTFPYFYILCSWK-----LSVLFMFCVLSLNVYSIMISGWSSNSSYATLGCI 135 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV-YHWPLSQSIPLVLALCACAFATF 187 R V E + + GS N+ T Y W ++P+ + A Sbjct: 136 RSVAQSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCFTVPMFFMMFVSMLA-- 193 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET 247 E+ + PFD +E E EL G EY G+ F + L ++ + + Sbjct: 194 -ELNRTPFDFSEGESELVSGFNIEYGGTSFAFL----------FLSEYLSIIFSSFLLTL 242 Query: 248 FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 F L + VK+V I L S+ R R D + W + Sbjct: 243 FFCNSLNVN-SFFFVKIVFFSFFIVLIRGSLPRYRYDKLMNLCWKSY 288 >UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Methanosarcinales RepID=FPOH_METAC Length = 348 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 31/293 (10%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R A + R GP G+LQ D IKL ++ + P +A +F P M+ + Sbjct: 40 LERKLSADIQFRYGPSRVGKFGLLQLVADAIKLFTKEDMRPRNADRLLFDNAPIFMMSSV 99 Query: 76 LTIATALPVVTV-----GSPLPQLGDLITLLYLFAIARF-FFAISGLDTGS--PFTAIGA 127 + A+PV V PL I++LY+ A++ F I + GS ++ +GA Sbjct: 100 FLMLVAIPVGAVFINGVEYPLAVTEMDISVLYIEAMSAITIFGIFMIAYGSNNKYSLLGA 159 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATF 187 R V E L + + A + GS NI I +Q + + L F F Sbjct: 160 FRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIAS-------AQGLLWNIFLQPIGFIVF 212 Query: 188 I-----EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 +MG+LPFD E+E+EL G ++EY+G FG+ + + ++ + +F+ Sbjct: 213 FIALMADMGRLPFDQNESEEELVAGWITEYTGMRFGLGFFAEYIHMILGSFLVALLFLGG 272 Query: 243 GQMETFTAGGLLLALV----IAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + F A +L L+ ++K V+ ++ I ++ R R+D ++W Sbjct: 273 WNVPAFVANNPVLGLIAPTGFFLLKTVLVLMTIIGMRWAVPRFRIDQVVDLSW 325 >UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasmatales RepID=Q979M4_THEVO Length = 346 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 34/289 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLT 77 R ARL R GP G LQ D IKL+G++S+ P + ++ PY++ ++ Sbjct: 47 RKYMARLQLRYGPNRVGKFGSLQLIADAIKLVGKESILPKLRDDFAYKTAPYIVFIGLVV 106 Query: 78 IATALPV---VTVGSPLPQLGDLITLLYLFAIARFFFA--ISGLDTGSPFTAIGASREAM 132 +P +GS D+ +L+ AIA ++G+ + + + +GA R Sbjct: 107 GFILIPYGDFYWIGSLTITHSDVSLILFFGAIAMMPIGEILAGISSHNKYALLGAMRGVA 166 Query: 133 LGVLVE-PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL----VLALCACAFATF 187 V E PM+L + A V + ++ +Q IP L L A Sbjct: 167 KDVSFEVPMMLSAI---ALVMMDSAVNKTPLEFSSLVSTQFIPFGILQPLGLFVFMVAMI 223 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG----ISLKQLVVLQMFVGVFI-PW 242 PFDL+E++ E+ G +EYSG FG+ G I L LV+ +++G + P+ Sbjct: 224 ARSSYTPFDLSESDSEIVSGYSTEYSGMRFGLFYMGMFGSIFLGSLVISLLYLGGYNGPY 283 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 F + ++K ++ VL+ L SM R+R+D W Sbjct: 284 SSYAGF---------IYLLIKGLIMVLISFLIWLSMPRIRIDRFVNFGW 323 >UniRef50_Q04P29 Formate hydrogenase, subunit C n=4 Tax=Leptospira RepID=Q04P29_LEPBJ Length = 295 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 24/214 (11%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFR 65 P+I+ + FA+ L G+ + R+ R+G VLQ + D +++ ++ V SG+ Sbjct: 10 PIIRIVSFFALPFLCGGLVQKIRSYSQGRKGTPVLQIFYDTWRMIRKKPVDGPFSGFFTE 69 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 +P ++ L V ++ S + G + + +L + RF ++ G+ F + Sbjct: 70 ASP------LIAFLAGLVVWSLASF--EWGSFLLIPFLIGVMRFALLAYSVENGTSFAGM 121 Query: 126 GASREAMLGVLVEPMLLLGLWV-AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 GA+RE +L V EP+++L L V + + + N +++ L L + Sbjct: 122 GAAREIILYVFCEPIMILVLVVFESHLVFNANFASLAFG------------GLFLLGTSL 169 Query: 185 ATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGS 215 E+ K PFD EL E L E SGS Sbjct: 170 VILAELAKPPFDDPRTHLELTMVHEAMLLEASGS 203 >UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bacteria RepID=B5YKI6_THEYD Length = 333 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 11/189 (5%) Query: 36 GP-GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQ 93 GP G+LQ D++KL+ ++ + P VFR P + + L+ +PV Sbjct: 49 GPHGLLQPIADVVKLIFKEDIIPIKVDRIVFRTAPLISLTAALSTFAVIPV----DKNWV 104 Query: 94 LGDL-ITLLYLFAIA---RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAA 149 + D+ + LLY+ IA + SG + S + +G R A + E L L L Sbjct: 105 IADINVGLLYVIGIAGIGTYGIIFSGWASNSKYAFLGGLRSAAQMISYEVALGLSLVGVI 164 Query: 150 QVAGSTNISNITDTVYH-WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGP 208 +A S N++ I + W P ++ A E +LPFDL EAE EL G Sbjct: 165 LMAESFNLTEIVNRQAELWYGMFLFPQIIGYFVFVVAMLAETNRLPFDLPEAETELVAGY 224 Query: 209 LSEYSGSGF 217 EYSG F Sbjct: 225 FVEYSGIRF 233 >UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=cellular organisms RepID=NUOH_DEIDV Length = 390 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 32/281 (11%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G+LQ D IK + ++ + A V+ L P + +G+ LT +P GS Sbjct: 47 NRVGPMGLLQPAADAIKSIFKEDLQVTLADKLVYTLAPIIAIGMALTAFGGIPAGPEGSL 106 Query: 91 L---PQLGDL----ITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 P + +L + LL L ++ + + G +GS + +G R + + E + L Sbjct: 107 FGENPWVYNLDAGVLALLALTSMGVYGIFLGGWASGSKYPMLGGLRSSAQMISYELGMGL 166 Query: 144 GLWVAAQVAGSTNISNIT--DTVYHWP-LSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 + + GST ++I W L QS+ L L + +F E + PFDL EA Sbjct: 167 SILGLLMLVGSTRFTDIVLWQGANGWMILFQSLGFALFLIS----SFAETNRTPFDLVEA 222 Query: 201 EQELQEGPLSEYSGSGFGVMKWG----------ISLKQLVVLQMFVGVFIPWGQMETFTA 250 EQEL G L+EYS +KW I+ L+ F G P G + Sbjct: 223 EQELVAGYLTEYS-----AIKWALFQMAEYVNMITASALMSTLFFGGWRGP-GFLNGIIP 276 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G + ++ +VK+ + V ++ RLR D R W Sbjct: 277 GIADIPILWLVVKIGFFLFVFIWVRATLPRLRYDQLMRFGW 317 >UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK9_9CORY Length = 446 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 44/324 (13%) Query: 7 LIQALVLFAVAPLLSGITRVARAR-----LHNRRGP------GVLQEYRDIIKLLGRQSV 55 LI+A++ FA+ PLL I V R + +R GP G+LQ D +K + ++ Sbjct: 17 LIKAIIFFAL-PLLMAIVTVWYERRLLAFMQSRLGPNMAGPIGLLQPMSDGVKTIFKEDF 75 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPV---VTVGSPLPQL--GDL-ITLLYLFAIA- 107 P +VF L P++ T + LP+ V++ QL GDL + +L++ A+A Sbjct: 76 MPKGVDKFVFTLAPFITGTAAFTTWSVLPLGGRVSIFGHETQLQNGDLPVAVLFILAVAG 135 Query: 108 --RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD--- 162 + ++G + S ++ +G R A + E + L + VAG+ + I + Sbjct: 136 LGTYGLVLAGWSSTSRYSLLGGLRAAAQMISYEISMGLAVVAVVLVAGTMSTLGIVEAQS 195 Query: 163 ---TVYHW--PLSQS-----IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 T++ W PL +P L C A E + PFD+ E E EL G ++Y Sbjct: 196 ETLTLFGWESPLPAWNFLILMPAFLIFCVTMLA---EANRAPFDMPECESELVGGYGTDY 252 Query: 213 SGSGFGVMKWGISLK----QLVVLQMFVGVF-IPWGQMETFTAGGLLLALVIAIVKLVVG 267 SG F + G + + +F+G F PW T GG ++ I+K+ + Sbjct: 253 SGFRFAMFYLGEYMNMGTLSAICATLFLGGFHAPWPLNGTALDGG-WWGIMWFIIKVAIM 311 Query: 268 VLVIALFENSMARLRLDITPRITW 291 + ++ R R D + W Sbjct: 312 LFFFIWVRATVPRYRYDQLMDVGW 335 >UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax=uncultured archaeon RepID=D1JHT1_9ARCH Length = 387 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 31/290 (10%) Query: 23 ITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSV-GPDASGWVFRLTPYVMVG 73 I R R+ R GP G++Q D ++ L ++ + DA F P+ Sbjct: 83 IERKMVGRMQWRVGPREISPRTRGIIQLLADSLRFLFQEVIIHKDAHKRYFLQFPF---- 138 Query: 74 VMLTIATALPVVTV-----GSPL-PQLGD--LITLLYLFAIARFFFAISGLDTGSPFTAI 125 + I LP++ + GSPL P + D L ++ L + F G + + F I Sbjct: 139 -LYFIPVLLPLLFINAGAAGSPLVPIVSDYGLQLMVALICLMPVFILGLGWASNNRFAFI 197 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH--WPLSQSIPLVLALCACA 183 G REA L E ++ ++ + G++ + D W + Q+ + A Sbjct: 198 GTIREAFLYFAYEIPFIVAVFAMVVMYGTSGSVGVVDAQAGGWWGIIQN-----PIAAIT 252 Query: 184 F--ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 F A + +LPFD+ EA+QE+ GP E+SG FG+ K V+ + +F+ Sbjct: 253 FFIAALMATARLPFDIPEADQEVSFGPFVEFSGIAFGLAYVMGYEKMYVLSALMTMLFLG 312 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G G + L+ ++K ++ ++V+ R RLD +I W Sbjct: 313 GGSGPVIPGLGEISYLIWFVLKTLIVMIVMVNLRGVYPRYRLDQGMKIGW 362 >UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ceratosolen solmsi RepID=D1FKC5_9HYME Length = 314 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 21/214 (9%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ-SVGPDASGWVFRLTPYV 70 L+ + R + + R+GP G+LQ + D +KL ++ +VG + ++ + P Sbjct: 26 SFLTLLERKLLSYMQLRKGPNKTGFIGLLQPFSDGVKLFTKEFAVGFKVNRLLYYMCPLY 85 Query: 71 MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 + +M + T+LP + + + + ++ + + + SG + +P +G+ R Sbjct: 86 GMLLMFSCWTSLPYTV--NFMSHGANGLLIICILSAGVYLLIFSGWFSSTPLGMLGSIRS 143 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT-VYHWPLSQSIPLVLALCACAFATFI- 188 + E L+ ++ +AG ++ + +T + W +L L AF F+ Sbjct: 144 VAQTISYEVSLIFIIYSVLMLAGGFDLFELYETQKFSW-------FILTLPISAFMFFVS 196 Query: 189 ---EMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 E+ + PFDL+E E EL G +EY S F + Sbjct: 197 MLAELNRTPFDLSEGESELVSGFNTEYGASIFSL 230 >UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Brachionus plicatilis RepID=B1GYJ7_BRAPC Length = 299 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 32/209 (15%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R HNR GP G+LQ D KLL +QS+ P A+ + + ++P++ + + L Sbjct: 25 RKVMGLFHNRLGPNKVSFIGLLQPLLDAFKLLSKQSLTPLRANKFTYHISPHLALVLSLF 84 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR-------- 129 I +P + + + L+ +I F ++G + S ++ IG+ R Sbjct: 85 IWLTMPTLYMMVNMNY--SLVMFFCAGSIMVFSVLLAGWSSNSKYSLIGSLRSVAQSISY 142 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIE 189 E++ L+ +L+L + S + + + IP++ C A E Sbjct: 143 ESVFSTLIVLVLILIM------------SYSIRSSFSLSSALLIPVLPLWLICTLA---E 187 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 + PFD +E+E EL G +EYSG+ F Sbjct: 188 THRAPFDFSESESELVSGFNTEYSGAYFA 216 >UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Siphonodentalium lobatum RepID=Q6VEI0_9MOLL Length = 295 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 18/218 (8%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS 60 LI A+++ + + R + +R+GP G+LQ D +KLL + P S Sbjct: 10 LIMAVMVLLTVSFYTIVERKCLSYAQSRKGPNKVVFLGLLQAVADGVKLLSKSMNEPFKS 69 Query: 61 GWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 +V F P VM+G+ LT LP + S + G ++ +L LF + + SG + Sbjct: 70 NFVYFTGAPMVMLGISLTCWYFLPGLGFKSAV---GPILLVLCLFGVNVYCLIFSGWCSY 126 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S ++ IG R V E + A Q+ ++ + + S ++L + Sbjct: 127 SSYSMIGCVRAVAQSVSYEVCSFFS-YCAQQL---LEVTFFLGSSTSFFFSFLFIVILWM 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 F E + PFD AE E EL G EY S F Sbjct: 183 ----FVCMAETNRAPFDFAEGESELVSGFNVEYGSSLF 216 >UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=Fungi/Metazoa group RepID=NU1M_USTMA Length = 331 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 25/233 (10%) Query: 2 SVLYPLIQALV-----LFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLL 50 S+LY L++ LV L +VA ++ I R + R GP V LQ + D +KL+ Sbjct: 3 SILYNLLEILVVLVPILLSVA-FMTVIERKVMGSMQRRIGPNVVGYYALLQPFADALKLV 61 Query: 51 GRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL-ITLLY---LFA 105 ++ V P A+ +F L P V + L +P+ P L D + +LY L + Sbjct: 62 IKEQVIPSQATKSLFFLAPMVTLIFSLLGWGVIPL----GPGLALSDFSLGILYSLALSS 117 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 I + +G S + +G+ R + E + + + G+ NI+ I ++ Sbjct: 118 IGVYGILFAGWSANSKYAFLGSLRSTAQMISYELIYSAAVLAVILLCGTFNITEIIESQQ 177 Query: 166 H-WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 W + +P+ + A A E + PFDL EAE EL G ++E+SG F Sbjct: 178 SVWYIMPLLPIFILFFVSALA---ETNRTPFDLPEAESELVAGFMTEHSGMIF 227 >UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dermatophagoides RepID=C1IWC6_DERPT Length = 299 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 40/286 (13%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS--VGPDASGWVFRLTPYVMVGV 74 + R +H R+GP G+LQ D KLL +++ + P S F ++G+ Sbjct: 23 VERKIMGIMHYRKGPNKVLIWGLLQPISDAAKLLTKETSKLQPLKS---FMYWSAPLLGM 79 Query: 75 MLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 +L ++ L ++ S L + +L + +++ F F ++ + S ++ IG R Sbjct: 80 LLMMSCWLWYESIFSLLSNKMKIFCILSIMSLSAFVFMLTSWGSNSKYSMIGGYRAISQI 139 Query: 135 VLVEPMLLLGLWVAAQVAGSTN---ISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E ++ ++V + S + + I + + W + S+PL A E Sbjct: 140 ISYEVCFVIFIFVILYLMNSYSPMKMKMIQENL--WLMFLSLPLFFTWVVMCMA---ESN 194 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFG---VMKWGISLKQLVVLQMFVGVFIPWGQMETF 248 + PFDLAE E E+ G EY G F +M++G + MF+ +F Sbjct: 195 RTPFDLAEGESEIVSGFNIEYGGGLFALIFIMEYG--------MIMFL----------SF 236 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + + L + ++++K + + R+R D + W F Sbjct: 237 LSTLIFLGVSMSLLKTLTFCFLFIWIRCCFPRVRYDKLMNLCWKVF 282 >UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=Bacteroidetes RepID=NUOH_BACFN Length = 358 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 10/193 (5%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVG-PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR G G +Q D++K+L ++ + + +++ L P++++ + LP+ Sbjct: 65 NRVGKWGSIQVLCDVLKMLTKEIIELKHSDKFLYNLAPFMVIIASFLTFSCLPI---SKG 121 Query: 91 LPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 L L + + +L A I ++G + + F+ IGA R + E + L + Sbjct: 122 LEVLDFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGAQIISYELSVGLSILT 181 Query: 148 AAQVAGSTNISNITDTVYH-WPLSQ-SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQ 205 + G+ S I ++ + W + + IP ++A A E + PFDL EAE EL Sbjct: 182 MVVLMGTMQFSEIVESQANGWFIFKGHIPALIAFVIYLIAGNAECNRGPFDLPEAESELT 241 Query: 206 EGPLSEYSGSGFG 218 G +EYSG FG Sbjct: 242 AGYHTEYSGMHFG 254 >UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=Deltaproteobacteria RepID=NUOH1_SYNFM Length = 329 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 24/290 (8%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPY 69 A L + R R+ R GP G+LQ D IKL+G++ + P + +F L P Sbjct: 27 ALFLVWLERKVAGRIQLRPGPMEVGPHGLLQTIMDGIKLVGKELITPRSVDRKLFILAP- 85 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARF-FFAI--SGLDTGSPFTAIG 126 V V + + V+ G L + +L +F+ + F AI G + + + +G Sbjct: 86 --VLVFMPVLVGFLVLPFGPGLILRDMNVGILLIFSFSTFTVLAILAGGWASNNKYALLG 143 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT---DTVYHWPLSQSIPLVLALCACA 183 A R V E LLL + + S S I V+ L L+ +CA A Sbjct: 144 AIRSVGQNVAYEIPLLLTVMSVVLMVNSMRFSEIVAAQGRVWFIFLQPVAGLLYLICATA 203 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI-PW 242 E + PFD+ EAE EL G +EY+G FG+ +V + +F W Sbjct: 204 -----ETNRAPFDIPEAESELVAGFHTEYTGMRFGLFFLAEYTNMFIVTAVATSLFFGGW 258 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 F G L +V ++K V + VI + R+R D +W Sbjct: 259 HGPFGFDFG--LPGVVWFLIKTYVLIFVIMWVRWTFPRIRFDQLMNFSWK 306 >UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=Bacteroidetes/Chlorobi group RepID=NUOH_PELLD Length = 372 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 95/229 (41%), Gaps = 23/229 (10%) Query: 11 LVLFAVAPLLSGI--TRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASG 61 LV A+ L G+ R A + +R GP G+LQ DI+KLL ++ + P A Sbjct: 46 LVFIALYALTYGVYGERKISAFMQDRLGPMEVGKWGILQTLADILKLLQKEDIVPTSADK 105 Query: 62 WVFRLTPYVM-VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA---ISGLD 117 ++F + P V+ VG L A V+ G + L Y I +G Sbjct: 106 FLFVIGPGVLFVGSFLAFA----VLPFGPAFIGANLNVGLFYAIGIVALEVVGILAAGWG 161 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT------VYHWPLSQ 171 + + + GA R V E + L A +AG+ ++ I H+ L Q Sbjct: 162 SNNKWALYGAVRSVAQIVSYEIPAAIALLCGAMMAGTLDMQEINVLQSGPWGFAHFFLFQ 221 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 S L A+ E + PFD+ EAE EL G +EYSG F V+ Sbjct: 222 SPIAWLPFLIYFIASLAETNRAPFDIPEAESELVAGYFTEYSGMKFAVI 270 >UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=Aquificales RepID=NUOH_AQUAE Length = 336 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 28/241 (11%) Query: 2 SVLYPLIQALVLFAVA----PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S+ + ++ +++F++A L+ R + NR GP G+LQ D +KL Sbjct: 7 SLAFTFLKIVIVFSLALGIGAYLTWFERKLAGHIQNRLGPTVVGKFGILQPLADALKLAT 66 Query: 52 RQSVGPDASGWVFRLTPYVMVGV----MLTIATALPVVTVGSPL--PQLGDL-ITLLYLF 104 ++ + P + VM V +LTI P VG+ P + D+ I LL F Sbjct: 67 KEVIIPRGADKPVYYAAVVMALVPSILLLTIIPFGPGFRVGNTYIEPIIADVNIALLLAF 126 Query: 105 A---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT 161 A ++ + SG + S + IG+ R+A + + E +L + +AG+ + I Sbjct: 127 AFGSLSVYGTIFSGWASNSKYAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIV 186 Query: 162 DTVYH----WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 + + Q + +L L F E G++PFD+ EAE EL G EY G F Sbjct: 187 EAQIQKGVWFIFYQPVAFILYL----FCMLAESGRVPFDIQEAEAELVTGYNVEYGGMKF 242 Query: 218 G 218 G Sbjct: 243 G 243 >UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=cellular organisms RepID=NUOH_ORITB Length = 356 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 16/253 (6%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R A + R GP G+LQ D IKL+ ++ + P A +F + P + + L Sbjct: 47 RKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFKEPIIPAKADRKLFIIAPIITFVLSLL 106 Query: 78 IATALPV-VTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 + +P+ + +G ++ +L + ++ + I+G + S + +GA R A + Sbjct: 107 GWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSAAQMIS 166 Query: 137 VEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI-EMGKLPF 195 E + L + V G ++ I + P+ +I ++L L F + + + +LPF Sbjct: 167 YELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTI-MMLPLAVIYFISILAKTNRLPF 225 Query: 196 DLAEAEQELQEGPLSEYSGSGFGVMKWG----ISLKQLVVLQMFVGVFIPWGQME--TFT 249 DL EAE EL G EYS F + G + L ++ MF+G ++P +E TF Sbjct: 226 DLPEAESELVAGYNVEYSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFI 285 Query: 250 AGGLLLALVIAIV 262 G + L +++V Sbjct: 286 PGYIWFILKVSMV 298 >UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bothriometopus macrocnemis RepID=A8VTY0_9NEOP Length = 309 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 19/214 (8%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-QSVGPDAS-GWV 63 VL +VA S R A + NR GP G+LQ + D +KL+ + +S P G + Sbjct: 25 VLLSVA-FFSLFERKVLAIIQNRVGPDKVGIVGILQPFSDAMKLISKTESPSPSKKVGVL 83 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAI---ARFFFAISGLDTGS 120 + +P +M + + P S ++L++ A + + ++G + S Sbjct: 84 YFFSPAIMFVISFIVWITFP-----SNWEIYSFDKSMLFVIACMGSSVYGLVMTGWFSSS 138 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 ++ IG+ R + + E +L+LGL + + G+ ++ I + + PL Sbjct: 139 KYSLIGSVRAIGMSISYEIILVLGLVLMMFLLGTMSVKYIIS--FQEQMWLFFPLWFVFI 196 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 + E G+ PFDL+E E EL G EY G Sbjct: 197 ILLISFLAESGRAPFDLSEGESELVSGYSVEYGG 230 >UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=2 Tax=Embryophyta RepID=Q6JP41_9BRYO Length = 285 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 15/214 (7%) Query: 31 LHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALP 83 + R+GP G+LQ D +KL+ ++ + P ++ ++F + P V+ ++ +A A+ Sbjct: 2 MQRRKGPNAVGLFGLLQPLADGLKLMIKEPILPSSANLFIFIMAP-VITFMLSLVAWAVI 60 Query: 84 VVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 G L L + +LYLFAI+ + +G + S + +GA R A V E Sbjct: 61 PFDYGMVLSDLN--VGILYLFAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVS 118 Query: 141 LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 + L + GS N S I + + IPL + E + PFDL EA Sbjct: 119 IGLIIITVLIRVGSCNFSEIV--IAQKQIWFGIPLFPVFIMFFISCSAETNRAPFDLPEA 176 Query: 201 EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 E EL G EYS GF + G +++ +M Sbjct: 177 EAELVAGYNVEYSSMGFALFFLGEYANMILMSRM 210 >UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax=Coelomata RepID=Q2F2C2_DAPPU Length = 311 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 23/200 (11%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVMVGVMLTIATALPVVT 86 R+GP G+LQ + D IKL ++ V P S + F + P +G+ L + ++P + Sbjct: 35 RKGPNKVGLGGILQPFSDAIKLFSKEHVSPSTSNYSAFLIAPCFSLGLSLLMWLSIP--S 92 Query: 87 VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLW 146 + L ++ L + + +G + S ++ IG R V E L+L L+ Sbjct: 93 FFNLLSFNKSVLFFLCGLGVGVYGLLAAGWSSNSKYSLIGCLRGVAQTVSYEVSLVLILF 152 Query: 147 ------VAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 V ++ ++ ++ +P++ I + L E + PFD AE Sbjct: 153 TPLVVTVGYELGSFSSFQENLWFIFIFPVAGLIWFISCLA--------ETNRTPFDFAEG 204 Query: 201 EQELQEGPLSEYSGSGFGVM 220 E EL G +EYS GF ++ Sbjct: 205 ESELVSGYNTEYSSGGFALI 224 >UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Tax=root RepID=NU1M_DROME Length = 312 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 25/291 (8%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-F 64 VL +VA L+ + R + R+GP G+ Q + D IKL ++ P S ++ + Sbjct: 17 VLVSVA-FLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSY 75 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 ++P + + L + +P LG L L ++ + ++G + S + Sbjct: 76 YISPIFSLFLSLFVWMCMPFFVKLYSF-NLGGLFFLCCT-SLGVYTVMVAGWSSNSNYAL 133 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTN-ISNITDTVYHWPLSQSIPLVLALCACA 183 +G R + E L L L + GS N I VY W L P+ L + + Sbjct: 134 LGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSIS 193 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 A E + PFD AE E EL G EYS G ++ L + +F +F+P Sbjct: 194 LA---ETNRNPFDFAEGESELVSGFNVEYSSGGLALIFMAEYASILFMSMLFCVIFLP-- 248 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + F ++ +KL V ++ R R D + W F Sbjct: 249 -CDVFN--------LLIYMKLTFISFVFIWVRGTLPRFRYDKLMYLAWKCF 290 >UniRef50_A2BJ97 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ97_HYPBU Length = 262 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 6/183 (3%) Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 + G + FT IGA RE + + E +LL + A + G+ +I+ + Sbjct: 65 VMGWAASNKFTLIGAGREILTAIAGEVVLLASILPTALMYGTLDINEAVRAQMETGIIGL 124 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 + +A A + ++PFDL EQE+ GP +EYSG + V+ + +L L Sbjct: 125 VANPVAALLYFLAAMLITDRIPFDLVLGEQEIVNGPYTEYSGFLY-VLSMALDYAKLYAL 183 Query: 233 QM-FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 M F +F+ G FT G + + +K VV +L+ + R+RLD + W Sbjct: 184 MMLFTDLFL--GGWAPFT--GEITGSLAVFLKTVVVMLIAVFLRSVYGRMRLDKMVSMFW 239 Query: 292 AGF 294 F Sbjct: 240 GRF 242 >UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Thermoproteaceae RepID=A3MXU6_PYRCJ Length = 324 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 28/278 (10%) Query: 29 ARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLTIA 79 AR+ R GP G LQ D+IKL+ + V P + +F LTP ++L +A Sbjct: 37 ARVQWRYGPLYVSKPLGGFLQPIADLIKLVFSELVLPRHTNRHLFALTP-----LLLFVA 91 Query: 80 TALPVVTVG-SP-----LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 A+PVV + +P G + ++ I F ++ + FT IGA RE +L Sbjct: 92 EAVPVVFIAVAPGLVIFHHSYGLALAVVTWLLIPVFLVGMAWAEADK-FTYIGAVREILL 150 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKL 193 E LLL + + G+ + + + W + + LA A + + + Sbjct: 151 TAAYEVPLLLSVLAMFILYGTADPYAVVERQSLWGVLLN---PLAFLAFYISLAMSTTRF 207 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL 253 PF++ EAE E+ GP +EY GS ++ +G + ++ + +G + G F G L Sbjct: 208 PFEIPEAEPEVVLGPYTEY-GSTLFILSFGANYVKMYA-GVLLGAVLFLGGWSPF--GDL 263 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 LL + +VK + + + L R R+D R+ W Sbjct: 264 LLGALAVVVKAALLTVPLLLLRAIYPRYRIDQALRLGW 301 >UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexus RepID=B8GA12_CHLAD Length = 440 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 38/247 (15%) Query: 5 YPLIQALVLFAVAPL----LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 Y LI +VL VAPL + R AR+ +R GP G+ Q D +K+ ++ Sbjct: 27 YILIVTIVLI-VAPLQMLFFTYYERRVIARMQDRIGPNRVGPEGIWQPIADGVKMFTKED 85 Query: 55 VGPDASGWVFR-LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLIT-LLYLFAIARFF-- 110 + P A+ + L P V+V + + +P +P+ DL T LL+ FA++ Sbjct: 86 IVPQAADRIVHFLAPCVVVAPTVLMFAVVPWGPGMTPV----DLPTGLLFFFAVSSISAV 141 Query: 111 -FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN------------I 157 ++G + + F+ +GA R V E +L L + GS + I Sbjct: 142 GLMMAGWASNNKFSLLGAMRAVAQMVSYEIPAVLSLIAIVIIVGSLSLNEIIAYQSGLLI 201 Query: 158 SN-----ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 SN I D W + + V A A A E + PFD+ EA+ E+ G ++EY Sbjct: 202 SNRDLPGIPDLGLGWFVFTPVGFV-AFIAFFIAALAEGERTPFDIPEADSEIVAGYMTEY 260 Query: 213 SGSGFGV 219 SG FG+ Sbjct: 261 SGMKFGL 267 >UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Philopteridae RepID=Q2HJL2_9NEOP Length = 299 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 12/184 (6%) Query: 31 LHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS-GWVFRLTPYVMVGVMLTIATALP 83 + R+GP GVLQ + D +KL+ + P +++ ++P + + L P Sbjct: 36 VQGRKGPNKVGVGGVLQPFADAMKLISKNEYAPSKVIKFIYAVSPMISFFISLVFWIMYP 95 Query: 84 VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 V+ L ++ LL LF+++ + F +SG + S + IG +R + E L L Sbjct: 96 VIWNFFSLNL--SIVFLLVLFSVSVYGFILSGWFSSSKYANIGCARALAQSISYEVGLTL 153 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQE 203 + ++S I + + L + + + FA E + PFDLAE E E Sbjct: 154 SIIFFCLFFSCISLSEILEVQEFFFFFPFSFLFVFMWSIFFA---ETNRPPFDLAEGESE 210 Query: 204 LQEG 207 L++G Sbjct: 211 LKKG 214 >UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi (class) RepID=B8G6Z9_CHLAD Length = 407 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 89/338 (26%), Positives = 136/338 (40%), Gaps = 48/338 (14%) Query: 1 MSVLYPLIQALVL-FAVAPLLSGITRVAR---ARLHNRRGP------GVLQEYRDIIKLL 50 +++L +IQ V+ AV + +T R ARL NR GP G LQ D +KL Sbjct: 4 LTILIIVIQCFVITLAVTTAFAYLTLFERRLLARLQNRVGPNRAGPAGFLQPAADAVKLF 63 Query: 51 GRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVG---------SP-------LPQ 93 ++ + P A V+ L P + V L I +P + P + Q Sbjct: 64 FKEDIVPALADKPVYLLAPALAVIPALIIWAVIPFGCLNLNWDYQACYDPNRTNLWNILQ 123 Query: 94 LGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAA 149 + DL I +LY+ AI + ++G + + ++ +G R + + E L + Sbjct: 124 ITDLNIGVLYILAITSIGVYGITLAGWASNNKYSMLGGIRSSAQLISYELALGCAVLSVV 183 Query: 150 QVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPL 209 G+ + I W L IP +L A E+ + PFDL EAEQEL G Sbjct: 184 MTYGTLSTHEIIAQQRGW-LWGIIPQLLGFFLYMIAATAEVVRAPFDLVEAEQELTGGYN 242 Query: 210 SEYSGSGFGVMKWG-----ISLKQLVVLQMFVGVFIP----WGQMETFTAGGLLLALVIA 260 +EY F + I++ L V F G P G+ T AG + ++V Sbjct: 243 TEYGSMKFALFFMAEYIKLIAVSALAVTFFFGGWHFPGLDILGREVTALAGPVAGSIVFG 302 Query: 261 IV-------KLVVGVLVIALFENSMARLRLDITPRITW 291 IV K+VV + + S RLR D + W Sbjct: 303 IVSLGSFLLKVVVFLFISVWVRASWPRLRYDRLMDLGW 340 >UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=Eukaryota RepID=Q9TAH6_CAFRO Length = 336 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 13/204 (6%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVM 75 + R + R+GP G+LQ D +KLL ++SV P + + VF P G+ Sbjct: 29 LERQILGHVTRRQGPSTVGIFGLLQTIADALKLLAKESVFPRSINTIVFIFAPIFTCGLA 88 Query: 76 LTIATALPVVTVGSPLPQLG-DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 L +P G + ++ LL L +++ ++G + S + +GA R A Sbjct: 89 LANWVVIPFGN-GWAVADFNLGVLYLLALSSLSVHSIIMAGWSSNSKYAFLGALRSAAQM 147 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSIPLVLALCACAFATFIEMGKL 193 + E + L L ++ S N+++I Y+ W PL L C A E + Sbjct: 148 ISYEIAMGLILLSVILLSQSLNLTDIVMAQYNVWFFIPLFPLFLMFLICILA---ETNRH 204 Query: 194 PFDLAEAEQELQEGPLSEYSGSGF 217 PFDL EAE EL G EYS GF Sbjct: 205 PFDLPEAEAELVSGYNVEYSAVGF 228 >UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Schlettererius cinctipes RepID=C4NCG7_9HYME Length = 318 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 12/215 (5%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG-PDASGWVF 64 VL +VA L+ + R + + NR+GP G Q + D IKL +++ + +++ Sbjct: 21 VLLSVA-YLTLLERKLLSYMQNRKGPNKVGIIGFFQPFSDAIKLFSKENFELEKVNMYLY 79 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 ++P ++ +ML + +P++ + + +G +I + ++ ++ + + G + S ++ Sbjct: 80 FISPIFLMLLMLMMWILIPMI-INLMMFDMGIIIMICFM-SMTVYGLMMCGWSSNSIYSI 137 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R V E +++ + V + GS + + Y LS + + Sbjct: 138 LGSIRSIAQTVSYEVSMIIMMLVIVLMVGSFDFYELLK--YQKNLSFMFFFFMLMLMFMV 195 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 IE+ + PFDL+E E EL G +EY F + Sbjct: 196 MMLIELNRSPFDLSEGESELVSGFNTEYMSGMFAL 230 >UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Tax=Metazoa RepID=NU1M_HUMAN Length = 318 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 17/196 (8%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLT-PYVMVGVMLTIATALPVVT 86 R+GP G+LQ + D +KL ++ + P S +T P + + + L + T LP+ Sbjct: 34 RKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPM-- 91 Query: 87 VGSPLPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 P P + + LL++ A +A + SG + S + IGA R + E L + Sbjct: 92 ---PNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAI 148 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQE 203 L ++GS N+S + T H L +P +T E + PFDLAE E E Sbjct: 149 ILLSTLLMSGSFNLSTLITTQEH--LWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESE 206 Query: 204 LQEGPLSEYSGSGFGV 219 L G EY+ F + Sbjct: 207 LVSGFNIEYAAGPFAL 222 >UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=cellular organisms RepID=NUOH_PROAC Length = 440 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 44/231 (19%) Query: 25 RVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVM 75 R A++ NR GP GV Q D +KL+ ++ + P A VF L P V+ G+ Sbjct: 37 RRVLAKMQNRIGPIMNSAWAGGVFQAVGDGLKLIFKEMLTPKGADKIVFNLAP-VIAGI- 94 Query: 76 LTIATALPVVTVGSPLPQLGDL---------ITLLYLFAIAR---FFFAISGLDTGSPFT 123 + V+ +G + G + +L++ A+A + ++G + ++ Sbjct: 95 -ACFASWSVIPLGGQVSMFGHTTRLQITDVPVAVLFILAVASIGIYGVVLAGWSSAGTYS 153 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---------------YHWP 168 +G+ R + + E + L L +GS + S I ++ ++W Sbjct: 154 LLGSLRSSAQMISYEVAMGLSLVTVFIFSGSMSTSQIVESQANHLVVGGFDTHIAGHYWL 213 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 L L+ + F E +LPFDL E E EL G ++EYSG +G+ Sbjct: 214 L-----LIPSFVIYVITMFGESNRLPFDLPECESELVSGYITEYSGFPYGM 259 >UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteriaceae RepID=D2RZ82_9EURY Length = 364 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%) Query: 33 NRRGPG-VLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GPG + D ++LL ++ V P +A + L P ++ G L V+ +GS Sbjct: 77 NRLGPGGIFIILADSVRLLSKELVVPENADRPAYDLAPIIVAGSALL---GFAVIPMGSG 133 Query: 91 LPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVE-PMLLLGLW 146 + + L Y+FA IA ++G + + ++ IG R + E P+++ G+ Sbjct: 134 IHLADPEVGLAYVFAVSGIASLGLVMAGYASANKYSLIGGLRAVAQNIAYEIPLVVTGMS 193 Query: 147 VAAQVAGSTNISNITDTVYHWPLSQSIPLV----------------LALCACAFATFIEM 190 V AG+ +S I +Q+ PLV A A F E+ Sbjct: 194 VVI-FAGTLQMSEIVA-------AQAEPLVSFAGLDIPRWYALVNPFAFVLFLIANFAEV 245 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF-- 248 G+ PFD EA E+ G +EYS F L+ L F+ +F+ G + T Sbjct: 246 GRNPFDTPEAPTEIVAGYQTEYSSVYF----------VLIYLGEFLHIFLGGGIIATIFL 295 Query: 249 ----TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 G L +V IVK+ L+ +++ R+R+D I W G Sbjct: 296 GGPAGPGPAALGIVWFIVKIWAIFLLTQWLRSAVPRVRIDQLIEIGWKG 344 >UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular organisms RepID=A9F4Q4_SORC5 Length = 645 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 34/234 (14%) Query: 10 ALVLFAVAPLLSGITRVAR---ARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DA 59 A++L +AP IT V R AR+ +R GP G+L D IK + ++ V P ++ Sbjct: 267 AIILLFMAPTAGIITWVERRVSARMQSRIGPNRAGPQGLLVWVADGIKSIMKEDVIPAES 326 Query: 60 SGWVFRLTPY-VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF---FAISG 115 +FRL PY V VGV T V+ G L I +L++ A+ G Sbjct: 327 DKALFRLAPYLVFVGVSATFV----VMPFGQYLIAADLDIGILFVIAVTSLVTIGLMTGG 382 Query: 116 LDTGSPFTAIGASREA--------------MLGVLVEPMLLLGLWVAAQVAGSTNISNIT 161 + + ++ +G R A + V++ L L + AQ ++ ++ Sbjct: 383 WASNNKWSLLGGIRSAAQIISYEIPGAVAIVCIVMMTGSLRLQDIIGAQGGAGPSLLDVG 442 Query: 162 DTVYHWPLSQSIPLVLALCACAFATFI-EMGKLPFDLAEAEQELQEGPLSEYSG 214 +HW + ++ P+ AL F T + E + PFDL EAE EL G +EYSG Sbjct: 443 GWPWHWFVFRN-PITFALFFLYFTTALAEGNRAPFDLPEAESELVAGYSTEYSG 495 >UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Chytridiomycetes RepID=Q950Q6_SPIPN Length = 301 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 44/289 (15%) Query: 31 LHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALP 83 + R GP G+LQ + D IKL+ +++V P ++S W+F P+V + L LP Sbjct: 29 MQRRIGPNKVGYLGLLQPFADGIKLILKETVLPLESSHWLFLGAPFVTFYLALLNWLVLP 88 Query: 84 VVTVGSPLPQLGDL-------ITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 + G L +L I+ L ++ + SG S + +G+ R + Sbjct: 89 L-DYGVALSELLGGGILILIAISELSIYGVIY-----SGWAANSKYPFLGSLRSTAQMIS 142 Query: 137 VEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFD 196 L L L G+ N+ +I P+S PL+ + E + PFD Sbjct: 143 YSVSLSLILLTVIFTLGTVNLLDILAA--QQPVSLFYPLLPMAILFMISAVAETNRAPFD 200 Query: 197 LAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLA 256 L EAE EL G +E+S F G LV+ +F +F G+ A Sbjct: 201 LPEAESELVAGFFTEHSAVSFAYFFLGEYTSILVICTLFFILFF-----------GVSAA 249 Query: 257 LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG---FGFAFLAFV 302 L + + S+ARLR D R+ WA F A++ F+ Sbjct: 250 LPM--------IFFFIWLRASLARLRFDQLLRLGWAHILPFTIAYILFL 290 >UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZV7_DYAFD Length = 359 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 32/223 (14%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLT 77 R + +R GP G+LQ D K+ ++ P A+ W+F P + MLT Sbjct: 32 RKVAGFIQDRSGPNRAGWGGLLQPLADAGKMFFKEDFIPALANKWLFIAGPSL---AMLT 88 Query: 78 IATALPVVTVGSPLPQLGDLITL---------LYLF---AIARFFFAISGLDTGSPFTAI 125 A V+ GS G + L LY+F A+ + + G + + F+ + Sbjct: 89 ALLASAVIPFGSTFRINGHEVALQGVESNIGILYVFGVVALGVYGIMVGGWASNNKFSLL 148 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY--HWPLSQSIPLVLALCACA 183 GA R A + E + L L ++ S ++ I + +W + + C+ Sbjct: 149 GAIRAASQNISYEVAMGLSLIAILMMSSSLSLGEIVAQQHGMNWNIFYQPLGFIIFITCS 208 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 FA E ++PFDL E E EL G +EY G MK G L Sbjct: 209 FA---ECNRVPFDLPECETELVGGYHTEY-----GSMKLGFYL 243 >UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMG8_9ACTO Length = 500 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 18/211 (8%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG-PDASGWVFRLTPYVMVGVM 75 + R AR+ R GP G+ Q + D +KLL ++ + A ++ + P+V Sbjct: 43 VERRGLARMQTRLGPNRVGPLGLGQAFADAVKLLIKEDLWLKGADKIIYFVAPFVGAVCA 102 Query: 76 LTIATALP----VVTVGSPLP-QLGDL-ITLLYLFAIA---RFFFAISGLDTGSPFTAIG 126 T+ +P V G P QL D + +L++ AIA + + G S G Sbjct: 103 FTVMAVVPMGPNVSIFGHSTPLQLADSPVAVLFVLAIAALGEYGLVLGGWSAHSTLPFYG 162 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 + R A + E L L L AG+ ++S I L + L A + Sbjct: 163 SVRGATQMISYELALGLSLVTVFLTAGTMSMSGIVAAQSD--LWNIVTLFPAFVVYLISM 220 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 F E +LPFDL EAE E+ G +EYS F Sbjct: 221 FGETNRLPFDLPEAEGEIVAGHTTEYSSMKF 251 >UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK2_FIBSS Length = 451 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 52/304 (17%) Query: 33 NRRGPGVLQE------------YRDIIKLLGRQSVGPDASGWVFR--LTPYVMVGVMLTI 78 RRG G +Q+ Y I+LLG D + F+ P + ++ + Sbjct: 36 ERRGAGFMQDRQGPNRSYIKIPYFGKIRLLGYVQNMCDGTKLFFKEMFAPAGVNKLLYYV 95 Query: 79 ATALPVVTVG-SP--LPQLGDLI---------------------TLLYLFA-IARFFFAI 113 A A+P V SP +P G +I LL+ F+ I+ + + Sbjct: 96 APAIPFAIVFLSPCVIPWFGPMIFDWGGETVRIAGSIIDSDVGVLLLFGFSSISAYGAML 155 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH--WPL-S 170 +G + S ++ +GA R + + + E L L L +AGS N+++I H W + + Sbjct: 156 AGWASKSKYSFLGALRTSSMTISYEVCLGLSLMGILLLAGSFNLTDIVQWQEHHVWGIVA 215 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG----ISL 226 Q + L A+ E G+ PFD+AE E EL G +EY FG+ G I + Sbjct: 216 QPVAFFCFL----IASIAETGRAPFDVAEGEPELVAGYHTEYGAMQFGLFYMGEYSHICI 271 Query: 227 KQLVVLQMFVGVF-IPWGQMETFTAG-GLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 ++ +F+G + +P+ ET G LA++ ++ + + ++ S + Sbjct: 272 NSFLIATLFLGGYAVPFVTTETMQEHMGGSLAILCGVLAFIALAFLHMIYRYSRKLKATN 331 Query: 285 ITPR 288 +T R Sbjct: 332 LTHR 335 >UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Bacteria RepID=A1ALP6_PELPD Length = 389 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/309 (22%), Positives = 125/309 (40%), Gaps = 59/309 (19%) Query: 38 GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSP------ 90 G++ D K+L +++ P + + L P++ + +L + +A+P P Sbjct: 61 GLIHGIADGSKMLLKENFTPTTYDRFCYNLAPWLALAPVLLVFSAIPFGGTLVPGKLIDP 120 Query: 91 --LPQLGDLITLL-----YLFAIARF------FFAISGL----------DTGSPFTAIGA 127 PQL ++ Y+ +AR AISG+ + + F+ +GA Sbjct: 121 ASFPQLSQIMVNFFGDKSYVMQVARLDAGILVILAISGIGILGTMLAGWSSNNKFSLLGA 180 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT--------DTVYHWPLS-QSIPLVLA 178 +R A + E + L L G+ +++++ + W + Q + VL Sbjct: 181 ARAASQMISYEVSMGLALISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGIILQPLAFVLF 240 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 L AC E ++PFDL E E EL G +EY+ G+ ++ +VV + V V Sbjct: 241 LTAC----IAENKRVPFDLPECESELVSGYFTEYTAMKMGIFMLSEFIEIVVVSALLVTV 296 Query: 239 FIPWGQMETFTAGGLLLAL------------VIAIVKLVVGVLVIALFEN----SMARLR 282 F+ + T G +L + ++ IV +V V +I F+ S+ R R Sbjct: 297 FLGGYNLPYLTDAGFVLPMGKTIALSHATVVLVQIVTFLVKVFLIGCFQIQIRWSVPRFR 356 Query: 283 LDITPRITW 291 D R W Sbjct: 357 YDQLMRFGW 365 >UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax=Bacteria RepID=NUOH2_RHOPB Length = 324 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 13/265 (4%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSP 90 NR GP G LQ D +K+L ++ P + V + L P V +L VV G Sbjct: 43 NRVGPFGFLQWVADTVKILTKEDRPPPGADRVAYILAPMVAATPVLA---GFGVVAFGDG 99 Query: 91 LPQLG---DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 L ++ LL + + + + L + S F +G R A + E L L L Sbjct: 100 LALANIDVGVMFLLGMMGLTVYGVVLGALASHSRFALMGGLRAAAQMLGYEAFLGLSLLG 159 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLAL-CACAFATFIEMGKLPFDLAEAEQELQE 206 +AGS +++ I P AL C A +LPFDL E+E +L Sbjct: 160 VVMIAGSLSLTEIVHAQRDVWFVLLQPFGAALFCIAGVAA---AHRLPFDLPESENDLVA 216 Query: 207 GPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVV 266 G L+EY+G FG+ G L L+V + V +F G + G L + +K+ V Sbjct: 217 GYLTEYTGMSFGLFFLGEYLAVLLVASLAVTLFFG-GWLGPVWLGPYLPGPIWFGLKVGV 275 Query: 267 GVLVIALFENSMARLRLDITPRITW 291 L+ ++ R R D R W Sbjct: 276 IALIFIWIRATLPRPRYDQLVRFAW 300 >UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycetales RepID=C7MTD4_SACVD Length = 441 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 24/234 (10%) Query: 7 LIQALVLFAVAPLLSGI----TRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 L++A+V+ + P+L+ R A R+ NR GP G Q D IKL ++ V Sbjct: 16 LLKAVVILLIGPILTVFMIVWERKALGRMQNRPGPNRVGPNGWFQSIADAIKLPFKEQVI 75 Query: 57 PD-ASGWVFRLTPYVM-VGVMLTIATAL--PVVTV--GSPLPQLGDL-ITLLYLFA---I 106 PD A ++ L P ++ V M+ +A P VT+ + QL +L +++L + A + Sbjct: 76 PDTADRKIYFLAPMIVAVPAMIGLAAIPFGPEVTIFGERTVLQLIELPVSVLLILAGASV 135 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + ++G +GSP+ +G R A + E + L + A A S + I H Sbjct: 136 GVYGIILAGWASGSPYPLLGGLRSAAQVISYEIAMGLSIVGVALYAQSLSTGEIVAAQEH 195 Query: 167 -WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 W +P + + E + PFDL EAE EL G +EYS F + Sbjct: 196 GWYFYLLLP---SFVIYLISMVGETNRAPFDLPEAESELVGGFHTEYSSMKFAM 246 >UniRef50_B0SCV0 Formate hydrogenase, subunit C n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCV0_LEPBA Length = 292 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 24/221 (10%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYV 70 ++ F + LL+GI R RA RRGP ++Q + +I K + V + + L P + Sbjct: 12 ILFFCLPFLLTGIVRKVRAFAQGRRGPKLIQFFWEINKSWLKDPVLHNNFSSISNLAPRL 71 Query: 71 MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 L I + + L + I + + A+ RF + ++ + F + + RE Sbjct: 72 AFFSSLMIWSII--------LFEWAPFILIPFFLAMYRFSYIGFAMEGATSFGGMASGRE 123 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF-ATFIE 189 +L V+VEP +L + +A ++I I++T Q + + +F A E Sbjct: 124 ILLSVMVEPTFILMI-----LAAQSHI-EISET------PQGLLIGFLFLILSFIAILAE 171 Query: 190 MGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLK 227 + K PFD EL E + E SG + + S+K Sbjct: 172 LAKPPFDDPRTHLELTMVHEAMILEASGRHLALFELSSSIK 212 >UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 n=5 Tax=Thermoproteaceae RepID=A1RV03_PYRIL Length = 350 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 120/301 (39%), Gaps = 45/301 (14%) Query: 25 RVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMV--- 72 R A AR+ R GP G LQ D K + + + P A +F P + + Sbjct: 41 RKAAARVQMRVGPYHVSPWLGGYLQLLADAFKFIISEPIIPKGAHKILFVWGPAIFITLA 100 Query: 73 ---GVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 ++L + L ++ + LP L+ L + + I G + F IGA R Sbjct: 101 FGASLLLPLTPELRLIKDVNLLPY--GLVFSLVILLLVSISVVIIGWSVNNKFAYIGAVR 158 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI- 188 EA+L E L+L A + G+ N I + QS+ + L AF FI Sbjct: 159 EALLVTAYEIPLILSFLAMAILYGTLNPIEIVN-------KQSLLVGAILNPLAFLVFII 211 Query: 189 ----EMGKLPFDLAEAEQELQEGPLSEYSG-----SGFGVMKWGISLKQLVVLQMFVG-- 237 + PF++A+ E ++ GP S+Y G S G + +F+G Sbjct: 212 ATAMATARFPFEIADYEGDVATGPYSDYGGIFLVLSFAGGTYYATFSFSFFATLLFLGGW 271 Query: 238 -----VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 V PW Q G L+LA V +K+ + + + A +M LRLD T + W Sbjct: 272 ALPSYVVGPWPQD---LLGHLVLA-VWVFLKVTILMFLFAFLRAAMPVLRLDHTLILGWR 327 Query: 293 G 293 G Sbjct: 328 G 328 >UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria RepID=C1F217_ACIC5 Length = 402 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 116/311 (37%), Gaps = 55/311 (17%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFR 65 LFA+ +L R R+ NR GP G+LQ D IK L ++ + P A + Sbjct: 49 LFALTTVLE---RKGLGRMQNRFGPNRVGPLGLLQPVADGIKALTKEDIVPRSADALLHF 105 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI----------SG 115 L P V+V LP+ G + ++L A FFFAI +G Sbjct: 106 LAPVVIVCTAFLAYAVLPI----------GRNMIAVHLDAGILFFFAIGSATELAVFMAG 155 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI-------TDTVYHWP 168 + + ++ +GA R + E L+L +AG+ + I T HW Sbjct: 156 WSSRNKYSLLGAMRAIAQMISYEIPLILSSVAVIMIAGTLSPEQIVTAQAGFTGIFPHW- 214 Query: 169 LSQSIPLVLALCACAFATFI--------EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 FA F E + PFDL E E E+ G EYSG F + Sbjct: 215 --------YVFTPWGFAGFFLFMTAAAAETNRSPFDLPEGESEIIAGYFIEYSGFKFALF 266 Query: 221 KWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMAR 280 L+ V + + +F+ G F+ + + KL+V + ++ R Sbjct: 267 FLAEYLEIFAVSGLGITLFLG-GWSAPFSFLTWIPSWCWFFAKLLVLIATFIWIRGTLPR 325 Query: 281 LRLDITPRITW 291 LR+D W Sbjct: 326 LRMDQLMNFAW 336 >UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=Epsilonproteobacteria RepID=NUOH_CAMJD Length = 332 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 28/220 (12%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R A R GP G++Q D+IKL ++ + P ++ ++F + P + Sbjct: 34 RKVLAYFQRRIGPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFV 93 Query: 78 IATALPVVTVGSPL-----PQLGDL-ITLLYLFAIARF-FFAI--SGLDTGSPFTAIGAS 128 A+P++ + P + D+ + LL++ + F+A+ GL + + ++ +GA+ Sbjct: 94 SLAAIPMLPEFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAA 153 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNI----TDTVYHWPLSQSIPLVLALCACAF 184 R + + E + L L + GS ++ +I +D + W + + PL L A Sbjct: 154 RGLVAIISYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQ-PLAFVLFIIAL 212 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 FIE + P L E + E+ G +EYSG ++WG+ Sbjct: 213 --FIETNRTPLCLTENDAEIVAGYGTEYSG-----LRWGM 245 >UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E58B Length = 351 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 60/307 (19%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 I R AR+ R GP G+LQ D+ KLLG++S+ P ++L P +++ Sbjct: 45 IFRKYMARIQRRVGPNRVGKFGLLQLIADLFKLLGKESIMPAKRDDLAYKLAPAIVI--- 101 Query: 76 LTIATALPVVTVGSPLPQLGDL------------ITLLYLFAIARFF---FAISGLDTGS 120 I T L + LP GDL +TL+ +F + ++G+ T S Sbjct: 102 --IGTILAFIL----LPY-GDLAYFGSIAVTHSRVTLILMFGLLSILPIGEILAGISTKS 154 Query: 121 PFTAIGASREAMLGVLVE-PMLLLGLWV----------AAQVAGSTNISNI-TDTVYHWP 168 + +G R + E PM++ L + + G ++S I ++ V + Sbjct: 155 NYALLGTMRGVAKDISFEIPMMISVLAIVMITSRSYVTGTAITGGLSLSGIVSNEVIPYG 214 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG----I 224 + + PL L + + M PFD+ E++ EL G +EYSG FG+ G + Sbjct: 215 IIE--PLGLLIFYISMVARASMS--PFDMGESDSELISGYTTEYSGMRFGLFYVGLFGMV 270 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 L ++ +++G G E++ LL +K V+ VL+ + ++ R+R+D Sbjct: 271 YLTSFIISILYLGG--ANGPYESYVGFFYLL------IKTVILVLIAFVVWVTLPRIRID 322 Query: 285 ITPRITW 291 + W Sbjct: 323 RFVNLGW 329 >UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_DESPS Length = 333 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 31/219 (14%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYV-MVGVML 76 R A + R GP G+LQ D IKL+ +Q V P + F + P + M ++ Sbjct: 31 RRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFMVAPVLAMFPALM 90 Query: 77 TIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVL 136 + T + + +G L+ L + + A ++G + + ++ + A R + Sbjct: 91 SFVTIPFSENIVAHNMDIGLLVILAFA-SFAGLAILLAGWSSRNKYSMMAAIRAVSQTIA 149 Query: 137 VE-PMLLLGLWVAAQVAGSTNISNITDT----VYHWPLSQSIP-----------LVLALC 180 E PML+ + V+GS + I + +HW L P L+ +C Sbjct: 150 YEIPMLITAI-TVVLVSGSVDFIEIVHSQSGGFWHWNLWPLKPGLFNIFMPISFLIFFIC 208 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 + A E + PFDL EAE EL G +EYS GFG+ Sbjct: 209 SLA-----ETNRAPFDLGEAESELVAGFHTEYSSMGFGL 242 >UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBX4_9ACTO Length = 442 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 22/214 (10%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVM 75 + R R+ R GP G+ Q + D KLL ++ + A +++ L P + Sbjct: 45 VERRGLGRMQTRPGPNVAGPLGLFQAFADAGKLLFKEDMWTRRAERFLYFLAPAIAAFAA 104 Query: 76 LTIATALP----VVTVGSPLP-QLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIG 126 ++ +P V G P QL D+ + LY+ AIA + + G T S G Sbjct: 105 FSVYAVIPMGPNVKIFGHSTPLQLADMPVASLYILAIASLGLYGIVLGGWSTRSTLPLYG 164 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI--TDTVYHWPLSQSIPLVLALCACAF 184 A R + + E + L L ++GS + S I + W + P + C A Sbjct: 165 AVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQGQFWWAFTL-FPAFVIYCISAV 223 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 E+ +LPFDL EAE E+ G ++EYS FG Sbjct: 224 G---EVNRLPFDLPEAEGEIVAGHMTEYSSMKFG 254 >UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Blastocystis sp. DMP/02-328 RepID=B5SQ69_9STRA Length = 330 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 79/310 (25%), Positives = 122/310 (39%), Gaps = 52/310 (16%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYV-MVGV 74 + R + R+GP G+LQ D +KL+ ++ + P + + ++F L P + G Sbjct: 29 VEREILGSIQRRKGPNVVGPSGILQPLADGLKLMLKEIILPTNVNTFLFILAPVITFTGT 88 Query: 75 MLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL-------DTGSPF----- 122 ML A LP+ + G + +L+ +AI+ AI G+ +T PF Sbjct: 89 MLYWAI-LPL-SKGVTYTDFN--VGVLFFYAISSL--AIYGIILAGWASNTKYPFMGSIR 142 Query: 123 -TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-DTVYHWPLSQSIPLVLALC 180 TA S E +G + + L GS N + I Y W IPL Sbjct: 143 STAQMVSYELSIGTVFAVIFL--------CTGSLNFTKIVLAQQYIW---FCIPLFPLFI 191 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A E + PFDL EAE EL G +EYS GF + G ++V+ + + Sbjct: 192 IFLIALLAECNRHPFDLPEAEGELVSGFNTEYSAMGFALFFIG-EYGNIIVMSTLISILF 250 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALF----ENSMARLRLDITPRITWAG--- 293 G + F L + I+ L + + F + R R D RI W Sbjct: 251 CGGWLPLFG-----LTCIPGIIWLCLKICFFISFYVVVRGAYVRFRYDQLMRIGWKSLLP 305 Query: 294 FGFAFLAFVS 303 F + F+S Sbjct: 306 LCFGWFIFIS 315 >UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=Arthropoda RepID=P92111_9HEMI Length = 310 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R + + R+GP G+LQ + D +KL ++ P +++ ++ + P + Sbjct: 23 LERKVLSYIQCRKGPNKLGVLGLLQPFSDGMKLFMKEQFFPMNSNSMIYMVCPVFSMIQS 82 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 L I P V LG L L ++ + I G + S ++ +G R + Sbjct: 83 LFIWVIFPY-YVNCLEMGLGFLFFLC-CSSLGIYGLMICGWSSNSVYSMLGCIRSISQAI 140 Query: 136 LVE---PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 E ++LL ++ + N ++ W + S+P+ +C A E + Sbjct: 141 SYEVSLSLILLCFFLLVDSYSFISYYNFQFSL--WLIMLSLPIFFRWLSCCMA---ESNR 195 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVM 220 PFD +E E EL G EY G GF ++ Sbjct: 196 TPFDFSEGESELVSGFNVEYGGGGFALL 223 >UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax=Proteobacteria RepID=NUOH2_NITMU Length = 366 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 28/273 (10%) Query: 38 GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTIATALPVVTV--GSPLPQL 94 G Q D +K + ++ + P + V F L P +LT A AL V SP L Sbjct: 74 GWAQPIADAVKAVMKEIIIPSGANKVLFVLAP------ILTFAPALAAWAVIPFSPDVVL 127 Query: 95 GDLIT-LLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQ 150 D+ LLY+ A+ + I+G + S + +GA R A V E + L Sbjct: 128 ADINAGLLYILAMTSMGVYGIIIAGWASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLM 187 Query: 151 VAGSTNISNITD-----TVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQ 205 ++ S N+ +I ++ +W L P+ L A E + PFD+AE E E+ Sbjct: 188 MSQSLNLGDIVKGQQGASMLNWYLIPLFPMFLVYFISGVA---ETNRAPFDVAEGESEIV 244 Query: 206 EGPLSEYSGSGFGVMKWGISLKQLVVLQM----FVGVFIPWGQMETFTAGGLLLALVIAI 261 G EYSG F V ++V + F+G ++P + FT L+ + I Sbjct: 245 AGFHVEYSGMAFTVFFLAEYSNMILVAMLASIIFLGGWLPPVNVAPFT---LVPGFIWLI 301 Query: 262 VKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +K + F + R R D R+ W F Sbjct: 302 LKASFLLFCFLWFRATFPRYRYDQIMRLGWKVF 334 >UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=Verrucomicrobia RepID=B3DXP1_METI4 Length = 375 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/323 (24%), Positives = 130/323 (40%), Gaps = 64/323 (19%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVMLTIAT 80 G RV L +R G+ Q D KL+ ++ P + + L P+ ++ L I Sbjct: 46 GPNRVGLPFLKSRLW-GLGQPIADAFKLMLKEQFVPRVVKKFYYSLAPFFVIVPPLIIIG 104 Query: 81 ALPVVTVGSP--------LPQLGDLIT----LLYLFAIAR---FFFAISGLDTGSPFTAI 125 +P ++ +PQ G +I +L+ FAI+ + ++G + S + + Sbjct: 105 FIPFASIDPVTLSSLKIIIPQPGVIINSGTGVLWAFAISSLSVYGIVLAGWSSNSKYAFL 164 Query: 126 GASR--------EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD-TVYH---------- 166 G R E LG + P+ LL GS N S I + H Sbjct: 165 GGIRSTAQMISYEVALGFSIIPVFLL--------TGSLNFSEIVQYQIEHGWLLFPFLGK 216 Query: 167 ---------WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 WP L L+ A F E + PFDL E+EQEL G +EY G F Sbjct: 217 HPDFRLFVFWPF-----LFLSFLIFMVALFAETNRAPFDLPESEQELVAGYNTEYGGMKF 271 Query: 218 GVMKWG-----ISLKQLVVLQMFVGVFIPWGQM-ETFTAGGLLLALVIAIVKLVVGVLVI 271 G+ G I+ L++ G +P+G + E + G +LL ++ ++K+++ + + Sbjct: 272 GMFFLGEYAAMIAASSLIITLFLGGWSLPFGWLSEGKSLGVILLQALVFLLKILIFLFLF 331 Query: 272 ALFENSMARLRLDITPRITWAGF 294 ++ R R D + W F Sbjct: 332 IWVRWTLPRFRYDQLMNLGWKIF 354 >UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Arthropoda RepID=Q8HQ04_THRIM Length = 306 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTIATALPVVT 86 R GP G+LQ D +KL ++ P S + F ++P + + + LT+ +P + Sbjct: 37 RMGPNKVGLTGILQPMADAVKLYSKEINWPTQSNSMPFFISPCLSLTLALTLCLIMPYLK 96 Query: 87 VGSPLPQLGDLITLLYLFAI---ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 P + ++LL AI + ISG + S ++ IG+ R + E L+ Sbjct: 97 -----PWINMKLSLLMFLAILGLGVYPILISGWSSNSNYSLIGSMRALAQTISYEVSLVF 151 Query: 144 GLWVAAQVAGSTNISNITDT--VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAE 201 L + ++ S + ++ +T ++++ L ++ F+T E+ + PFD AE E Sbjct: 152 ILLSSLFISSSLSFYSLVETQKLFYFFL-----FIVPFYMWLFSTVAELNRTPFDFAEGE 206 Query: 202 QELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAI 261 EL G +E+S S F ++ + L++L +F M F + LL++V + Sbjct: 207 SELVSGFNTEFSSSPFAIIFMA---EYLMIL-----IFSLLTSMMYFCSNTNLLSMVKTM 258 Query: 262 VKLVVGVLVIALFENSMARLRLDITPRITWA 292 + + + A ++ R R D ++W Sbjct: 259 TMMFFFIWIRA----TLPRYRYDKLMNLSWK 285 >UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOH_BDEBA Length = 385 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 68/289 (23%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWV 63 L++ P+L + R A + +R GP G++Q D +K L +++ P A ++ Sbjct: 22 LMMVQAVPILVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMPQTAKPFL 81 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGD-----------------------LITL 100 + P + ++ A A + + SP+ Q+G ++ + Sbjct: 82 YYAAP---IFALIPGAVAFSAIPLSSPI-QVGTFEMFGSTWGPYTFLVQGYDIGVGIVFI 137 Query: 101 LYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI 160 L + ++A + ++G +G+ +T +GA R + + E L L + + G+ N++ + Sbjct: 138 LGVSSLAAYTLLMAGWGSGNKYTLMGALRASAQTISYELALGLSIVGVIMLYGTFNLTEM 197 Query: 161 TDTVYHWPLSQSIPLVLALCACAF----------------------ATFIEMGKLPFDLA 198 T L+Q PL + A F E +LPFDLA Sbjct: 198 T-------LAQQGPLAFSFLGHTITANWLPNWGIFYQPVGALLFFSAAFAESNRLPFDLA 250 Query: 199 EAEQELQEGPLSEYSGSGFGVM---KWGISL--KQLVVLQMFVGVFIPW 242 E E EL G +EY G F + ++G + L+VL F G IP+ Sbjct: 251 EGESELVGGFHTEYGGFKFNMFFIGEYGHMMIASGLMVLFFFGGYTIPY 299 >UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Paracyclopina nana RepID=C0J6S5_9MAXI Length = 304 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 21/195 (10%) Query: 34 RRGP------GVLQEYRDIIKLLGRQS-VGPDASGWVFRLTPYVMVGVMLTIATALPVVT 86 R GP GVLQ + D +KLL + S +A+ +++ P M+ + L + +P + Sbjct: 39 RIGPFKVGVWGVLQPFADAVKLLAKTSEANSNANKFLYFSAPVFMLSITLMLLNLVPCLE 98 Query: 87 VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLW 146 +G+ LG I + + +++ + +SG + S + +G+ R + E L + Sbjct: 99 LGNKW-SLG-FIFFIVILSLSVYPLLLSGWASNSKYAVMGSVRGVAQTISFEISLAIIFM 156 Query: 147 VAAQVAGSTNISNIT----DTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 + + S N+ I+ V+ PL I ++ + IE + PFD AE E Sbjct: 157 IMIILFLSMNLFFISVIKVSVVFVSPLLGLIWFIILV--------IETNRTPFDFAEGES 208 Query: 203 ELQEGPLSEYSGSGF 217 EL G EYS F Sbjct: 209 ELVSGFNIEYSSISF 223 >UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Monoblepharidales RepID=Q85MD1_9FUNG Length = 297 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 23/207 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R + R GP G+LQ + D +KL+ +++V P +++ W+F P+ + L Sbjct: 22 RKLMGAIQRRIGPNSVGFLGLLQPFFDGVKLILKETVLPLESNHWIFVFAPFFTFYLALL 81 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLG 134 +P+ G L L ++LYL A++ + SG S +T +G+ R Sbjct: 82 NWLVIPL-DKGLVLMDLEA--SILYLLAVSSLGVYGIIYSGWAANSKWTLLGSLRSTAQM 138 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNI----TDTVYHWPLSQSIPLVLALCACAFATFIEM 190 V E + L + S N+ I + ++ WPL I ++ + A E Sbjct: 139 VSYEVSMSLIVLTVVYAGASVNLVEIAYLQSGLMFIWPL-WPIAIIAFIAGLA-----ET 192 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGF 217 + P DL EAE EL G ++E+S F Sbjct: 193 NRAPMDLPEAESELVAGFMTEHSAISF 219 >UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Ascomycota RepID=C7FEW4_BRECS Length = 352 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 12/223 (5%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRL-TPYVMVGVMLT 77 R + R GP GVL + D +KLL ++ + WV+ + P + + +L Sbjct: 36 RKTMGYMQRRLGPNAVGYYGVLMAFADALKLLVKEIIVIRNGEWVYMVGAPLITLFAVLL 95 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 + +P T L +I LL ++ I+G + S +T + + R + Sbjct: 96 SLSVIPFDTGLGILEGEYSIIFLLGTGSLGILGTVIAGWMSNSKYTVLASVRTTAQLISY 155 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDT-VYHWPLSQSIPLVLALCACAFATFIEMGKLPFD 196 E +L +++ + S NI I D+ VY + +PL L A A E + PFD Sbjct: 156 ELILTTVVFIMVLLVNSLNIETIIDSQVYINYVIPLLPLALIYFIGALA---ENARPPFD 212 Query: 197 LAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 EAE EL G ++E S S F V+ + +V++ M +F Sbjct: 213 NIEAESELVSGHMTELSASPF-VIFFLSEYTSMVLMSMLTSIF 254 >UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B482_HERA2 Length = 413 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 121/294 (41%), Gaps = 28/294 (9%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVM 71 L+ R A + + +RRGP G+LQ + IK + ++ P +A V L P VM Sbjct: 37 FLTWYERRAISYMQDRRGPNRVGPQGLLQPISEAIKTMTKEDATPREADRIVHFLAPVVM 96 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIA-----RFFFAISGLDTGSPFTAIG 126 +G + + V+ G P DL + LF IA ++G + + F +G Sbjct: 97 LGATVL---SFAVIPWGRMFPV--DLNAAV-LFVIATGGLHSIGMMMAGWGSNNKFALLG 150 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-----WPLSQSIPLVLALCA 181 R + E ++ + + GS ++ I + W + + L L Sbjct: 151 GMRGVAQLISYEIPQVMAIIPVVLMTGSMSLQKIVEAQNDFGGLGWFVFSPVGL-LGFAL 209 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A+ E + PFD+ EA+ E+ G ++EYSG F V + L V + +++ Sbjct: 210 FFTASLAEGERTPFDIPEADSEIIAGYMTEYSGMKFAVFYLSNYMSNLAVCFITATLYLG 269 Query: 242 WGQMETFTA----GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 G A G LL+L+ ++K ++ L ++ RLR+D W Sbjct: 270 GGNGPGVDALGGFAGGLLSLIYFLLKSFALFFIMVLIRATVPRLRVDQLMGFAW 323 >UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5G3_9PLAN Length = 409 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 3/123 (2%) Query: 95 GDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQV 151 G I ++Y+FA IA + + G + + ++ +G R + + E + LG+ Sbjct: 125 GADIGMIYVFALSSIAVYGVILGGWSSNNKYSFLGGLRSSAQLIAYELPMGLGILGVVLC 184 Query: 152 AGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSE 211 AGS N+ + + + + L L A F E +LPFDL E EQEL G +E Sbjct: 185 AGSLNLEELITSQARTGVWYAFAQPLGLIVFVIAAFAEAARLPFDLPECEQELIGGYHTE 244 Query: 212 YSG 214 Y+G Sbjct: 245 YAG 247 >UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic n=236 Tax=cellular organisms RepID=NU1C_ARATH Length = 360 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 30/235 (12%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVG--- 73 + R A + R GP G+LQ D KLL ++++ P TP +G Sbjct: 50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGN-----TPLFSIGPSI 104 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLF----AIARFFFAISGLDTGSPFTAIGASR 129 +++I + V+ + L L DL ++L+ +IA +SG + + ++ +G R Sbjct: 105 AVISILLSYSVIPFSNHL-VLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLR 163 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT-----VYHWPL-SQSIPLVLALCACA 183 A + E L L + + ++ S + +I + + W L Q I ++ L + Sbjct: 164 AAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLIS-- 221 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 + E +LPFDL EAE+EL G +EYSG FG+ + S L++ +FV V Sbjct: 222 --SLAESERLPFDLPEAEEELIAGYQTEYSGIKFGLF-YVASYLNLLISSLFVTV 273 >UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax=Araneae RepID=Q1W1M9_9ARAC Length = 306 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/206 (20%), Positives = 90/206 (43%), Gaps = 14/206 (6%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFR-LTPYVMVGVM 75 + R + + R+GP G+LQ + D IKL + + ++ + +TP++ + + Sbjct: 24 LERKILSYIQIRKGPNKVGMMGILQPFSDAIKLFNKNLLPLESMNFTLSFMTPFMSLFIS 83 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 L + + + + + + L+ L +++ +F + G T S + +G+ R + Sbjct: 84 LCMISIM-MFNHSTLIDIKHSLLMFFILSSMSVYFILLIGWSTNSKYCHLGSIRSVAQMI 142 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVY--HWPLSQSIPLVLALCACAFATFIEMGKL 193 E + + ++ S + + + +T Y ++ + ++ L +C E + Sbjct: 143 SYEVPFFMVILFLVLLSQSYSFTQMEETQYLLYYFWGNMLLFMMWLSSCL----AETNRS 198 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGV 219 PFD AE E EL G EY G F + Sbjct: 199 PFDFAEGESELVSGFNVEYMGGLFAL 224 >UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=Rhizobiaceae RepID=NUOH2_RHIEC Length = 340 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 38/221 (17%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R + R GP G+LQ D IKLL ++ P +A ++F+L P + + Sbjct: 38 LERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILALAPP 97 Query: 76 LTIATALPVVTVGSPLPQLGDLITL---------LYLFA---IARFFFAISGLDTGSPFT 123 + A+P G + G ITL L++FA I F G S + Sbjct: 98 FVVFVAIPF---GETISVRGTEITLYLSNMNVALLFVFAVIGIEVFGVIFGGWAANSKYA 154 Query: 124 AIGASREAMLGVLVE-PM--LLLGLWVAAQVAGSTNI----SNITDTVYHWPLSQSIPLV 176 +G+ R + E PM ++G+ + AQ +I +++ + VY P+ + V Sbjct: 155 VLGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQTDVWNIVYQ-PVGFFVFFV 213 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 L E ++PFDLAEAE +L G +EYSG F Sbjct: 214 AGLA--------EAQRIPFDLAEAEGDLGAGFHTEYSGIRF 246 >UniRef50_Q57940 Putative NADH-ubiquinone oxidoreductase MJ0520 n=14 Tax=Euryarchaeota RepID=Y520_METJA Length = 295 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 18/231 (7%) Query: 14 FAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVG 73 F V LL G+ R AR+ R GP ++Q +K ++ P +G P + Sbjct: 19 FLVGSLLLGLHRKIMARIQGRPGPPIIQYLLHTLKFYVKEITFPITAG-----NPLYIFV 73 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 +L IA L + + L+ ++ ++ + + GL +GSP+ IG R Sbjct: 74 ALLDIAIWLAALIIAIDFKS--SLLIIIGIYVLQKIVEHGCGLSSGSPYGKIGGVRSVFS 131 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI----E 189 P+ V A + +T+ I+D + + + S L+ + CAFA FI + Sbjct: 132 AAAEVPL----FAVVAAIYLTTHSVLISDILSYQEIHGS--LLFKMPICAFAFFILLVSK 185 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 PF + + +++ G ++E+ G ++ ++ V+L +F+ VFI Sbjct: 186 APNSPFGIVKG-KDIVSGYMTEHYGLLGAIIYIAEAIAYFVLLWLFIAVFI 235 >UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular organisms RepID=D2SHE7_9ACTO Length = 486 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 81/310 (26%), Positives = 128/310 (41%), Gaps = 30/310 (9%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP-GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTP 68 + LFA+ + R+ + NR GP G LQ D +KL ++ + P A V+ L P Sbjct: 37 MTLFAIVFERKVVARMQQRIGPNRVGPRGYLQSLADGLKLAFKEDIMPALADKPVYFLAP 96 Query: 69 YVMVGVMLTIATAL----PVVTV-GSPLP-QLGD----LITLLYLFAIARFFFAISGLDT 118 V+ V +A ++ PVV++ G P QL D ++ +L A+ + + G + Sbjct: 97 -VLATVPAFLAFSVIPLGPVVSIFGQQTPLQLTDAPIGVLIVLACSAMGIYGIVLGGWAS 155 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT------------VYH 166 GS + +G+ R A V E + L + AGS + S I + Sbjct: 156 GSTYPLLGSLRSAAQMVSYEIAMGLSIVAVFLYAGSMSTSEIVAAQADGNQVSFFGLEFT 215 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 P +I L ++ A A E + PFDL EAE EL G +EYS F + + Sbjct: 216 GPGWYAILLPVSFVIYAIAVVGETNRAPFDLPEAESELVGGFHTEYSSLKFALFFLAEYI 275 Query: 227 KQLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 + V + +F+ PW A L+ +K+V + V ++ RL Sbjct: 276 NMVTVSALAATLFLGGWRAPWPISIWDGANSGWWPLLWFFLKVVAALFVFIWLRGTLPRL 335 Query: 282 RLDITPRITW 291 R D R W Sbjct: 336 RYDQFMRFGW 345 >UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Unionidae RepID=D2DVZ7_9BIVA Length = 303 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 31/224 (13%) Query: 12 VLFAVAPL--LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV 63 +LF++ + L+ + R + A + R+GP G+ Q D +KLL + + S Sbjct: 12 ILFSIIAMAFLTLLERKSLALMQLRKGPNKLSLMGLTQPMADALKLLTKANTTTSVSN-- 69 Query: 64 FRLTPYVMVGVMLTIATALPVV-------TVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 TP MV ++ T A AL ++ T + LG L+ + + A A + ++G Sbjct: 70 ---TP--MVNLIPTGALALSMLMWYLYPATHSTTHKTLG-LLLFISISATAMYTIILAGW 123 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT---VYHWPLSQSI 173 S + +GA R + E L+L + + ++ + ++S + + W L+ + Sbjct: 124 SVNSKYALLGAMRAMAQAISYEIPLILAMIFYSLLSNTLDLSAFCEKSHLTFKWSLTMPM 183 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 LV A E ++PFD E E EL G EYS F Sbjct: 184 TLVWFTVILA-----ETHRMPFDFVEGESELVSGFNVEYSSVKF 222 >UniRef50_B3IUI3 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Leptotrombidium RepID=B3IUI3_9ACAR Length = 293 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 29/200 (14%) Query: 30 RLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATAL 82 ++H R GP G+LQ D +KL ++ P +S +++ TP++ V V L + Sbjct: 29 KVHLRVGPFRVGLIGILQPISDFLKLFNKKFWIPVKSSLFIYLFTPFLCVFVGLIVW--- 85 Query: 83 PVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEP 139 ++ G T+L F ++ F+ ++G + SP++ +G+ R A + E Sbjct: 86 --LSYGGKNSITNTKWTILSFFCLSSLLVFYLLLTGWSSSSPYSMLGSYRSAAQTISYEV 143 Query: 140 MLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL-----ALCACAFATFIEMGKLP 194 L + + + + W + P +L F+ E + P Sbjct: 144 CL---------IFIIFSSIFFSKSFSIWFNGEEAPSLLFVHPILFLVWMFSCLAEANRTP 194 Query: 195 FDLAEAEQELQEGPLSEYSG 214 FDL E E EL G +EY G Sbjct: 195 FDLTEGESELVSGFNTEYFG 214 >UniRef50_A7C247 Respiratory-chain NADH dehydrogenase, subunit 1 n=3 Tax=Gammaproteobacteria RepID=A7C247_9GAMM Length = 306 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 42/274 (15%) Query: 33 NRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLP 92 R GP Q DIIKL +++ + G++ + +++G + LPV + L Sbjct: 42 RRVGPPFWQPVYDIIKLYAKKT--QISHGYMHDVAVMMLLGGYIASEIFLPVPGMNG-LA 98 Query: 93 QLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR--EAMLGVLVEPMLLLGLWVAAQ 150 DL+TL+YL + A+ +P +IG SR +ML V ++++ AA Sbjct: 99 NQADLLTLMYLLMVPMLGMALGVGQCANPNGSIGISRALSSMLAYDVPFVIVVA--GAAV 156 Query: 151 VAGSTNISNITDTVYH-----WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQ 205 GSTN+ I + W L S+PL+ A + + +GK PF++ A E+ Sbjct: 157 SYGSTNLVQIIEIQQQGGPATWGLF-SMPLL--AIAGLISMYAMLGKEPFEIYVAPAEIA 213 Query: 206 EGPLSEYSGSGFGVMKWGISLKQLVVLQMF----VGVFIPWGQMETFTAGG----LLLAL 257 GP+ E SG G L V+Q F VGV F GG L Sbjct: 214 TGPMVEMSGKYMGT---------LFVMQCFQLYTVGVL----YTTLFLGGGANWLTFLPK 260 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 V A+V + V + N R R D R W Sbjct: 261 VFAVVFISVAI------TNVFGRYRTDDVIRWLW 288 >UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=cellular organisms RepID=NUOH_SILST Length = 345 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 24/210 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVMVGVMLT 77 R A + RRGP G+LQ D +K + ++ V P S VF L P + + Sbjct: 38 RKIWAAVQMRRGPNVVGVYGLLQTVADALKYVVKEVVIPAGSDRTVFILAPLTSFVLAMI 97 Query: 78 IATALPVVTVGSPLPQLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAML 133 +P L D+ + +LY+FA++ + + G + S + +G+ R A Sbjct: 98 AWAVIPFNDTWV----LSDINVAILYVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQ 153 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDT------VYHWPLSQSIPLVLALCACAFATF 187 + E + L + GS N +I +++W P+V A Sbjct: 154 MISYEVSIGLIIIGVILSTGSMNFGDIVRAQDGDAGLFNWYWLPHFPMVFLFFISCLA-- 211 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 E + PFDL EAE EL G EYS + F Sbjct: 212 -ETNRPPFDLPEAESELVAGYQVEYSSTPF 240 >UniRef50_Q9B893 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Schistosoma RepID=Q9B893_9TREM Length = 297 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 23/200 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDASGWVFRLTPYVMVGVMLT 77 R + + R+GP G+LQ + D +KL+ + V G W L + ML Sbjct: 30 RKVLSYIQLRKGPNKVGIAGLLQSFADFMKLVVKIKVNGYIVHSWFGWLGCF-----MLF 84 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFF---FAISGLDTGSPFTAIGASREAMLG 134 + + V + +LY+ + F + G + + ++ + A R A Sbjct: 85 FCSCMGVYIYSCSFSGIYYSFMMLYILMVFTFISYGLLMLGWASWNKYSLLSAVRVAFSS 144 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLP 194 V E +L+ L V + GS + + PL+ + ++ + F E + P Sbjct: 145 VSYEMILMCVLLVFGMLLGSYGNVSFCLMSFITPLNYIVWII--------SMFSESNRAP 196 Query: 195 FDLAEAEQELQEGPLSEYSG 214 FD E+E EL G +EYSG Sbjct: 197 FDYGESESELVSGSNTEYSG 216 >UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=Eukaryota RepID=Q6E7A5_SAPFE Length = 321 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 21/229 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++++ PL+ ++ F +A R + + R+GP G+LQ D +KL +++ Sbjct: 9 IALILPLLISVAYFTLA------ERKILSSIQRRKGPNVVGTFGLLQPLADGLKLFVKET 62 Query: 55 VGPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR---FF 110 V P V F P + + L +P G + I +LYL AI+ + Sbjct: 63 VLPSNCDVVLFIFAPILTFFLSLLSWVVIPF---GKGMSYAELNIGILYLLAISSLGVYG 119 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 I+G + S + +GA R + +V L +G + + + + +++ I + + Sbjct: 120 IIIAGWSSNSKYAFLGALRSS--AQMVSYELTIGFSILSVIVCTQSLNLIDIVLCQEKIW 177 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 +PL ++ E + PFDL EAE EL G EYS GF + Sbjct: 178 YCVPLFPIFIIFFISSLAETNRHPFDLPEAEAELVSGYNVEYSAMGFAL 226 >UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Microcotyle sebastis RepID=A3QRI2_9PLAT Length = 305 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 112/278 (40%), Gaps = 26/278 (9%) Query: 23 ITRVARARLHNRRGP--GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVM--VGVMLT 77 I V +ARL ++ G+LQ + D IKLL + V + G +R Y + + +L Sbjct: 34 ILGVCQARLGPQKVSFLGILQSFADFIKLLAKLGVSFGSYKGLKYRGLFYWLGVIYFLLG 93 Query: 78 IATALPVVTVGSPLPQLGDLIT--LLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 T + +G+ + T L+ +++ + F + G + S ++ GA R + + Sbjct: 94 ATTFISFFILGNVSSWVVSNYTCWLIVFSSLSGYGFIMCGWGSNSKYSLYGAIRASFSSI 153 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPF 195 E +L+ + G + S I + Y LS L L +C+ E + PF Sbjct: 154 SFEGVLMCIVLSVGLYYGCYSFSVINN--YEGSLSIG-ALTLYICS-VIGVMSECNRSPF 209 Query: 196 DLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLL 255 D +E+E +L G ++Y G+ F ++ + ++ F+G F G LL Sbjct: 210 DFSESESDLVSGFNTDYYGASFAIL-FASEYSIMIFFSWFLGYFFM----------GSLL 258 Query: 256 ALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 L + + V A F R R D W Sbjct: 259 GLGFFFFHSFILIFVRACFP----RFRYDYYVNFVWKN 292 >UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=Bilateria RepID=NU1M_MYTED Length = 305 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 10/205 (4%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVM 75 + R A + R+GP G+LQ + D KLL ++ + P A+ F L P +M+ + Sbjct: 26 LERKILAIIMIRKGPSKVSYMGILQPFSDAGKLLCKEFIVPTRANVGPFILAPALMLAIS 85 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 L P + + + + +I + + +++ + +SG + S ++ +GA R + Sbjct: 86 LLGWLLYPYKS--AEVFYVFGVILFMVITSVSVYGVMMSGWASNSKYSLLGAVRAMAQSI 143 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPF 195 E + + +G I+ +PL + + E + PF Sbjct: 144 SYEIPMGFIFFCVVLCSGVFMFQEIS-VFQQSLFFFFLPLCVVMLVWMLCMLAETNRAPF 202 Query: 196 DLAEAEQELQEGPLSEYSGSGFGVM 220 D E E EL G EYSG GF VM Sbjct: 203 DFVEGESELVSGYNVEYSGGGFAVM 227 >UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular organisms RepID=A5UXK5_ROSS1 Length = 452 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 55/245 (22%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R AR+ +R GP G+LQ D +K+ ++ + P +A WV L P V + Sbjct: 46 RRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKEDIVPRNADRWVHLLAPVVSLA---P 102 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFF---FAISGLDTGSPFTAIGASR----- 129 +A L V+ G + + LLY+ A++ ++G + + F +GA R Sbjct: 103 VAMMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLMMAGWGSNNKFALLGAMRAVAQL 162 Query: 130 --------EAMLGVLVEP--MLLLGL---WVAAQVAGSTNISN--------ITDTVYHWP 168 A+L V+V M LL L + G+T + N + T+ +P Sbjct: 163 VSYEIPAVTALLTVVVLAGGMSLLNLPHLQAGVPIMGATILCNDPAGCSPLLYTTITSFP 222 Query: 169 LSQSIPL----------------VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 S + P+ +L A E + PFD+ EA+ E+ G ++EY Sbjct: 223 GSPNEPVQALDLGLGWWVFTPVGLLGFVVFFIAALAEGERTPFDIPEADSEIVAGYMTEY 282 Query: 213 SGSGF 217 SG F Sbjct: 283 SGMKF 287 >UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Pancrustacea RepID=Q766W0_VARHI Length = 318 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 24/199 (12%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVT 86 R+GP G+LQ + D +KL ++ V P +S ++ ++P + + + L + P Sbjct: 49 RKGPNKVGYIGILQPFADAVKLFTKEDVVPMKSSVMLYMISPVLALFMPLCMWCVFPYWF 108 Query: 87 VGSPLPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 VG LY+F + + +SG + S + +G+ R + E +L + Sbjct: 109 VGVEFSW-----GWLYVFCGLGMGVYSLFLSGWSSNSKYAVMGSLRAVAQMISYEVVLAM 163 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI--EMGKLPFDLAEAE 201 + + GS ++ W + + + L + T + E + PFDLAE E Sbjct: 164 VVMLFVFFLGSYDMG-------LWGYTSLLGVGLLPLLWIWMTVMLGESQRSPFDLAEGE 216 Query: 202 QELQEGPLSEYSGSGFGVM 220 EL G +EYSG GF ++ Sbjct: 217 SELVSGFNTEYSGVGFALL 235 >UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax=Embryophyta RepID=B6D432_9MARC Length = 324 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 53/227 (23%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVM 75 + R A + R GP G++Q D IKL ++S+ P + F + P++ V+ Sbjct: 48 LERKISASIQQRIGPEYAGPLGIIQALADGIKLFLKESIIPSXVDEILFDIGPFL---VL 104 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF---FAISGLDTGSPFTAIGASREAM 132 + + ++ V+ +G + + I + + +I+ ++G + + ++ +G Sbjct: 105 VPVFSSYLVIPIGYDIILVNSDIGVFFWISISSIIPLGLLMAGYGSNNKYSFLG------ 158 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 GL AAQ +S IPL L++ + A + Sbjct: 159 -----------GLRAAAQ-----------------SISYEIPLALSVLSVALRE-----R 185 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 LPFDL EAE+EL G +EYSG F S L++ +FV +F Sbjct: 186 LPFDLPEAEEELIAGYQTEYSGIKFAFFYLS-SYLNLLISSLFVTIF 231 >UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_ACIC1 Length = 451 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 27/283 (9%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLT 77 R AR+ R GP G+LQ D +KL ++ + P A VF L P V+ Sbjct: 54 RRVVARMQQRIGPNRVGPFGLLQSLADGLKLALKEDIVPTLADKAVFILAP-VISATPAF 112 Query: 78 IATAL----PVVTVGSPLP--QLGDL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGA 127 +A A+ P V++ QL DL + +L++ A++ + ++G +GSP+ +G Sbjct: 113 LAFAVIPFGPTVSIAGHHTNLQLTDLPVAVLFVLAMSSLGVYGIVLAGWSSGSPYPLLGG 172 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSIPLVLALCACAFAT 186 R A V E + L +GS + S+I H W + + ++ A A Sbjct: 173 VRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQAHRWGILWA---GVSFAVYAIAM 229 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI-----P 241 E + PFDL E E E+ G +EY+ F + + + V + +F+ P Sbjct: 230 VGETNRAPFDLPEGETEIVGGFHTEYTSLKFALFYLAEYINMVTVSALMTTLFLGGWRAP 289 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 W A ++ ++KL + + V ++ R R D Sbjct: 290 WPLSLWSQANVGWWPVLWFLIKLGIVLFVFIWLRGTLPRFRYD 332 >UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Terebratalia transversa RepID=Q953X2_9BILA Length = 300 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 35/295 (11%) Query: 13 LFAVAPLLSGI---TRVARARL---HNRRGP------GVLQEYRDIIKLLGRQSVGPDAS 60 LF + P+L + T + R L NR+GP G LQ D +KLL + V P S Sbjct: 8 LFTLVPILLSMAFFTLLERKILGYAQNRKGPNKVGVGGWLQPILDAVKLLSKDLVSPSRS 67 Query: 61 GWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 V F P M+ +L++ L + S ++ + + +++ + +SG + Sbjct: 68 SKVGFFFAPVAMI--LLSLIFWLNYWSAFSFSYLSKGVLYFMCVSSLSVYPVFMSGWASN 125 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S + +GA R + E ++L + V + G +++ + + L + L A+ Sbjct: 126 SKYALLGAIRSVAQTISYEISMVLIILVPLCLVGGFDMNLMPGFFWVGVLFPYMVLPWAV 185 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A E + PFD AE E EL G EY G F ++ G + L + M +F Sbjct: 186 TVLA-----ETNRAPFDFAEGESELVSGYNVEYGGVPFTLIFMGEYISILFLSLMTAVLF 240 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + G + T G +A+V +V+ +++ RLR D+ +TW + Sbjct: 241 MGTGMVWVKTLG---VAVVFVLVR------------SALPRLRYDLIMGLTWKCY 280 >UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Lepeophtheirus salmonis RepID=Q4L1B9_9MAXI Length = 295 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 23/200 (11%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGPDA--SGWVFRLTPYVMVGVMLTIATALPV- 84 R+GP G+LQ + D IKL ++ VG + + V+ ++P V + V L I P+ Sbjct: 27 RKGPNKVSFLGILQPFSDAIKLFVKE-VGSFSFVNYSVYWISPVVGLSVALLIWNVYPLE 85 Query: 85 VTVGS-PLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 ++ GS + LG L + +++ + +SG + ++ IG R + E + + Sbjct: 86 MSFGSWSISWLGLLAGM----SVSVYPLFLSGWSSNCVYSHIGGVRGVAQVISYEVVFTI 141 Query: 144 GLWVAAQVAGSTNISN---ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 ++ ++GS + ++ Y + LS + + L A E + PFD +E Sbjct: 142 LVFSLMSLSGSLTLVGSMLFSEYFYVYMLSPLLVYLWFLTGLA-----ETNRTPFDFSEG 196 Query: 201 EQELQEGPLSEYSGSGFGVM 220 E EL G +EY GSGF ++ Sbjct: 197 ESELVSGFNTEYGGSGFALI 216 >UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomycetales RepID=C7Q2D9_CATAD Length = 322 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%) Query: 14 FAVAPLLSG-ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGPDASGW-VF 64 F V PL+ G + A A + +R GP G Q D +K ++ V P A+ VF Sbjct: 17 FLVVPLVVGQMEHKAMAHMQSRVGPMYAGAFHGWAQLVADGVKFAQKEDVVPAAADRRVF 76 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI-----SGLDTG 119 +L P V + L + A+P+ P Q+G + F +A + +G + Sbjct: 77 QLAPAVALIPYLVVLVAIPI----GPGTQVGRDLDAGLFFVLAVMGVGVLGSLMAGWASA 132 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL-VLA 178 + ++ +G R A + E ++L A AG+ +++ I +HW +P ++ Sbjct: 133 NKYSLLGGIRSAAQLMAYELPMILAASSVAMAAGTLSLTGIA-VAWHW---YWLPWQLMG 188 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 L + E+ + PFD+ A+ E+ G +EY+G F Sbjct: 189 LFVFFVSGLAELQRPPFDMPVADSEIIFGAYTEYTGIRF 227 >UniRef50_Q6EF18 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=51 Tax=Braconidae RepID=Q6EF18_9HYME Length = 218 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 9/174 (5%) Query: 47 IKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFA 105 IKLL ++ P +S +++ ++P +M +++ P + + L +++ L + + Sbjct: 1 IKLLNKEYFFPMKSSFYLYIMSPMMMFILIMMTWMIYPFYS--NLLFFENNMLYFLCMMS 58 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT--DT 163 + + ++G + S F+ IG+ R + E + + + + S N+ N+ + Sbjct: 59 LGIYSLILAGWSSNSSFSMIGSIRSIAQSISYEVVFSIIILIMMTNINSMNLFNLIFFNK 118 Query: 164 VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 ++ L PL+L + A E+ + PFDL+E E EL G EYS S F Sbjct: 119 FNNFSLIY-FPLMLIILFTMLA---EINRTPFDLSEGESELVSGFNIEYSSSKF 168 >UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 RepID=A6FCP5_9GAMM Length = 328 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 38/221 (17%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVMVGVM 75 + R + R GP G+LQ D IKLL ++ P A+ +F++ P V + Sbjct: 31 LERKIAGHIQQRPGPMRVGWHGLLQPVADGIKLLTKEDHIPSAADRTLFKMAPVVALVPP 90 Query: 76 LTIATALPVVTVGSPLPQLGDLITL---------LYLFAIAR---FFFAISGLDTGSPFT 123 + A+P+ G P+ G + L L++ A++ F ++G + S + Sbjct: 91 FVVFVAIPL---GEPVTIFGTEVMLSLSNMNVGLLFILAVSGIGIFGTILAGWASNSKYA 147 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-------DTVYHWPLSQSIPLV 176 +G+ R + E + + +A S N+ +I + VY PL + V Sbjct: 148 VLGSLRAIAQMISYEIPMGFSVIGVVMLANSMNMMDIVTAQKDMWNVVYQ-PLGFFVFFV 206 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 L E+ ++PFDL EAE +L G +EYSG F Sbjct: 207 AGLA--------EVQRIPFDLPEAEGDLGAGYHTEYSGIRF 239 >UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Tigriopus RepID=A2T4Y1_TIGCA Length = 306 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALPVVT 86 R+GP GVLQ D IKL G++ + P S +F + P + + V + I ++L + Sbjct: 36 RKGPNKVSLGGVLQPIADAIKLFGKEIMSPSMSNSLLFSVAPALGLVVFMLITSSLIGQS 95 Query: 87 VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVE---PMLLL 143 G + LI +L + ++ + ++G + + + +G+ R + E ++ L Sbjct: 96 HGGFIEY--SLIYILCIMSLGVYPLFVAGWSSNNKYALLGSLRGIAQSISYEISLSLIFL 153 Query: 144 GLWVAAQVAGSTNISNI----TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAE 199 L + +Q + + T++ PL ++L L +C E + PFD +E Sbjct: 154 SLMLLSQTFSVSGFEHFLPSGCLTLFLSPL-----MLLWLVSC----LAETNRTPFDFSE 204 Query: 200 AEQELQEGPLSEYSGSGFGVM 220 E EL G E+ G F M Sbjct: 205 GESELVSGFNVEFGGLNFVFM 225 >UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=Protostomia RepID=NU1M_PECMA Length = 354 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 119/299 (39%), Gaps = 30/299 (10%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WV 63 +VL +VA L+ R A R+GP G++Q + D IKL ++ P S + Sbjct: 52 VVLLSVA-YLTLFERKVLAASQVRKGPEMVGWLGIMQPFADGIKLFSKEYFTPSNSNPAL 110 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 F L P M+ + P + G + + +L + ++ + + G + S + Sbjct: 111 FFLGPCFMLLHSFILWGCSPGIW-GCGVYFFWGGLYVLSVLSVGVYGVVLCGWSSNSRYA 169 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-----LVLA 178 GA R + E ML+ V GS ++ +++ LSQ L L Sbjct: 170 MFGAVRALAQVISYEVMLVFLYLCPFFVVGSLDLESVS-------LSQVSGCNGGVLFLV 222 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ----- 233 L F E + PFD E E EL G EY GF M + ++ L Sbjct: 223 LPWWVFCVLAESNRAPFDFVEGESELVSGFNVEYGSGGFA-MIFIAEYSNILFLSTLTSV 281 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +F+G G E F GL+ + VI + V +I L +S R R D+ ++ W Sbjct: 282 LFLGGGNLLGNGEYF---GLISSSVIGSFFSFMVVFLIVLCRSSFPRYRYDMLMKLIWC 337 >UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Araneae RepID=Q6JT33_9ARAC Length = 304 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 35/217 (16%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVML 76 + R + R+GP G+ Q + D +KL G++ + S ++ V++ + Sbjct: 21 MERKVLGYIQCRKGPNKVGVLGIFQPFSDAVKLFGKEFYFLETSNMIYFYLGPVLMIPLS 80 Query: 77 TIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD----------TGSPFTAIG 126 + L + G + G L FFF SG+ + S F+ +G Sbjct: 81 LLLWILLPYSDGVLDLKYGIL-----------FFFICSGMGIFSLMLVGWGSNSKFSLLG 129 Query: 127 ASR--EAMLGVLVEPM-LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 + R M+ V M ++LGL + + +I I + + L I L + L C Sbjct: 130 SYRGVAQMISYEVSFMFIILGLLMISNSYLLIDIL-IYQEILWFFLGNLILLTMWLIVCM 188 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 E+ + PFD AE E EL G E+ G GF ++ Sbjct: 189 ----AELNRTPFDFAEGESELVSGFNVEFMGGGFAII 221 >UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular organisms RepID=A9GUZ6_SORC5 Length = 588 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%) Query: 93 QLGDL-ITLLYLFAIARFFF---AISGLDTGSPFTAIGASREAMLGVLVEPML---LLGL 145 Q+ DL + +LY+FA+A A++G + + F+ +G R A V E + ++GL Sbjct: 278 QVADLNVGILYIFAMAGTGIIGAALAGWASDNKFSLLGGLRAASQMVSYEVAMGLSIVGL 337 Query: 146 WVAAQVAGSTNISNITD--TVYHWPL-SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 ++ + GS + ++ + W + Q + +L L A A E ++PFD E E Sbjct: 338 FI---IYGSVRLGDMVQWQAEHTWGIFVQPLAFILFLAALA----AETKRIPFDQPEGES 390 Query: 203 ELQEGPLSEYSGSGFGVMKWG-----ISLKQLVVLQMFVGVFIP----------WGQMET 247 E+ G EYSG FG+ G I+ L+V F G +P +G Sbjct: 391 EIVAGYFVEYSGMKFGMFMTGEYVELITSSALLVTLFFGGYHLPFLDRDGINIAFGDATL 450 Query: 248 F----TAGGLLLALVIAIV-KLVVGVLVIALFENSMARLRLDITPRITW 291 F T + L V+A K ++ V F ++ R R D R+ W Sbjct: 451 FQYKMTHFAVSLTYVLAFFGKTILMAWVQVFFRWTLPRFRYDQVMRLGW 499 >UniRef50_B8D3Q2 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3Q2_DESK1 Length = 331 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 33/296 (11%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV--GPDASGW 62 L +F ++ + R AR R GP GVLQ + D KLL + V + Sbjct: 20 LFIFILSLFTQYLVRKISARYQKRMGPSYVGPYGVLQPFMDFWKLLRVKEVVRSRYSMQR 79 Query: 63 VFRLTPYVMVGVMLTIATALP--VVTVGSPLPQLGDLITLLYL-FAIARFFFAISGLDTG 119 V LT + + + LP V+ + PL D + Y+ A+ ++ L Sbjct: 80 VAELTLLIGIACITGAIVLLPIGVLNIRGPL----DYLVFFYMASAMPILMIVLASLSMP 135 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN-----ISNITDTVYHWPLSQSIP 174 P+T++G SR + + EP+ GL++ +A + +S + V L+ Sbjct: 136 GPYTSLGVSRLLSILTISEPVYFTGLFIPCFLATYRDPLVLSVSMTSHRVMDLWLNPVTA 195 Query: 175 LVLALCACAFATFIEMGKL--PFDLAEAEQELQEGPLSEYSGSGFG----VMKWGISLKQ 228 L+L L A ++ + PF++ EAEQE+ G +E+SG + +++ Sbjct: 196 LILLLSLIALVISLQSKAMYPPFNIPEAEQEIIAGFETEFSGPLLALASLLHDMDLTVSI 255 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 L V+ + +G P+ + T GG+L+ I+K +V VLV+A +N R RL+ Sbjct: 256 LTVVYIVLGGPAPFQHL---TLGGILM----VILKYLVLVLVVATIKNIFGRYRLE 304 >UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Hexactinosida RepID=B2BRP7_9METZ Length = 316 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 19/284 (6%) Query: 20 LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMV 72 L+ I R A R+GP G+LQ D IKL+ ++++ + +F L+P + + Sbjct: 21 LTLIERKILASRQIRKGPNIVGIYGLLQPIADAIKLIIKETIKHHKTTKTLFLLSPALAI 80 Query: 73 GVMLTIATALPVVTVGSPL--PQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 + LT + +P+ P P+LG +I +L L ++ + +SG S + +G+ R Sbjct: 81 IIALTAWSIIPL-DYKHPQRNPKLG-IIIILALSSLRIYTILLSGWARNSKYALLGSIRA 138 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM 190 ++ + +G+ + V+ S ++ + + +PL E Sbjct: 139 T--AQMIRYEVCIGIIILTIVSLSRRLNLRQIRMCQQKIWYILPLFPIFIMFTIRRIAET 196 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFDL E E EL G EYS F ++ + L++ ++ +F+ + TF + Sbjct: 197 NRTPFDLTERESELVSGFNVEYSAILFTLLFLAEYINILLMARIIRILFL---RGRTFLS 253 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 L I I++ + L I + + AR+R D + W + Sbjct: 254 VSNPRILAIKIIR--ISYLFICI-RATFARIRYDQLMNLLWKRY 294 >UniRef50_O79072 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=63 Tax=Braconidae RepID=O79072_9HYME Length = 155 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 7/160 (4%) Query: 41 QEYRDIIKLLGRQSVGPDASGWVFRL-TPYVMVGVMLTIATALPVVTVGSPLPQLGDLIT 99 Q + D +KLL ++ P S + F L +P +M ++L++ P + + + +L+ Sbjct: 1 QPFSDALKLLSKEFFYPLKSNFYFYLISPMLMFILILSLWLIYPFYS--NSISMKFNLMF 58 Query: 100 LLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN 159 L L ++ F ISG + + F+ IG+ R + E L + L V + + N++ Sbjct: 59 FLSLLSMGIFGLMISGWSSNNSFSMIGSFRSIAQSISYEVTLSISLLVVLMMINNINLNY 118 Query: 160 I-TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLA 198 + Y + +PL L L A E+ + PFDL+ Sbjct: 119 LPVYQKYIYMFLMFMPLTLMLFISMLA---EINRTPFDLS 155 >UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B9XHI2_9BACT Length = 381 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 114/288 (39%), Gaps = 42/288 (14%) Query: 38 GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYV-MVGVMLTIATALPVVTVGSPLPQLG 95 G+ Q D +K L ++ P F L P + MV +LT A +G + Sbjct: 81 GIFQPLADGLKFLLKEDFTPAHVRKIYFWLAPMIAMVPALLTFAVIPFGSNLGGQRMVIA 140 Query: 96 DL-ITLLYLFAIAR---FFFAISGLDTGSPFTAIGASR--------EAMLGVLVEPMLLL 143 DL + +LY F I + ++G S + +G R E +G+ V P+ +L Sbjct: 141 DLNVGILYTFGIVSLGVYGIVLAGYAANSKYPFLGGIRSSAQLISYEIAMGMSVIPVFML 200 Query: 144 GLWVAAQVAGSTNISNITDT----------VYHWPLSQSIPLVLALCACAFATFIEMGKL 193 G+ N+S + + +W L + L+ A F E +L Sbjct: 201 --------VGNLNLSGVIHYQTGGLFGISWLPNWLLFKQ---PLSFIIFIIAAFAETNRL 249 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF-----IPWGQME-- 246 PFDL EAE EL G +EYS F + G + M V +F +PW ++ Sbjct: 250 PFDLPEAETELVAGYHTEYSSMKFALFFLGEYANMIASSAMMVTLFLGGWTLPWFGLDQP 309 Query: 247 TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + G LL + I I K+++ +L+ R R D + W F Sbjct: 310 ADSIGIGLLHIGIFIGKIILLMLIFIWIRWMFPRFRYDQLMDLGWRRF 357 >UniRef50_P24887 NADH-ubiquinone oxidoreductase chain 1 n=9 Tax=Rhabditida RepID=NU1M_CAEEL Length = 291 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 33/200 (16%) Query: 32 HNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPV 84 NR GP G+ Q D +KLL ++ + P ++S F L P + VM L Sbjct: 34 QNRLGPTKVTFMGLAQALLDGVKLLKKEQMTPLNSSEVSFLLVPGISFVVM-----YLEW 88 Query: 85 VTVGSPLPQLGDLITLLY--LFAIARFFFA-----ISGLDTGSPFTAIGASREAMLGVLV 137 T LP D I+ Y LF + F+ ISG+ + S + IGA R + + Sbjct: 89 FT----LPYFFDFISFEYSVLFFLCLIGFSVYTTLISGIVSKSKYGMIGAIRASSQSISY 144 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDL 197 E + L+V + + N+ N L IP ++ + A E+ + PFD Sbjct: 145 E--IAFSLYVLCIIIHN-NVFNFVSKFNLSLLIIYIPFLIMVIA-------ELNRAPFDF 194 Query: 198 AEAEQELQEGPLSEYSGSGF 217 +E E+EL G E++ F Sbjct: 195 SEGERELVRGFNVEFARVAF 214 >UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax=Protostomia RepID=Q642W4_9ANNE Length = 310 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 29/228 (12%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS 60 L+ AL+ A LL R + R+GP G+ Q D +KL ++ + +S Sbjct: 13 LLMALLAMAFYTLLE---RKVLGYIQLRKGPNKVSISGIPQPLSDAMKLFIKEPLSTTSS 69 Query: 61 GW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLG---DLITLLYLFAIARFFFAISGL 116 + F P + ++L + + P P P L ++ L L ++ + +G Sbjct: 70 NFQAFCFAPMTTLLLILIMWSTYPY-----PFPSLFFTLGILLFLCLSSLNVYTTLAAGW 124 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S + +GA R + E + L L A + S +++ + SQ P + Sbjct: 125 ASNSKYALLGAVRSVAQTISYEVSMALVLISALMICNSFDLNKVLT-------SQMSPTM 177 Query: 177 LALCACAFATFI----EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 L + FI E + PFD E E EL G EY G GF ++ Sbjct: 178 LLMSPMFIMWFITCLAETNRAPFDFVEGESELVSGFNIEYGGGGFALL 225 >UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Actinomycetales RepID=NUOH_RHOSR Length = 450 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 17/200 (8%) Query: 33 NRRGP-GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYV------MVGVMLTIATALPV 84 NR GP G+LQ D IKL ++ + P ++ L P + M ++ A+ + Sbjct: 57 NRVGPRGMLQSLADGIKLALKEGIVPKGVDKPIYILAPVIAAVPAFMAFAVIPFGPAVSI 116 Query: 85 VTVGSPLPQLGDL-ITLLYLFA---IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 +PL QL DL + +LY+ A I + ++G +GS + +G R + E Sbjct: 117 FGHYTPL-QLTDLPVAVLYVLAATSIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIA 175 Query: 141 LLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSIPLVLALCACAFATFIEMGKLPFDLAE 199 + L AG+ + S I H W + +P L E + PFDL E Sbjct: 176 MALSFAAVFLDAGTMSTSGIVAAQEHTWYVFLLLPSFLIYVTSMVG---ETNRAPFDLPE 232 Query: 200 AEQELQEGPLSEYSGSGFGV 219 AE EL G +EYS F + Sbjct: 233 AEGELVGGFHTEYSSLSFAM 252 >UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax=Eukaryota RepID=NU1M_ACACA Length = 369 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 27/218 (12%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVM 71 L+ R A + R+GP G+LQ D +KL+ +++ P +AS +F P ++ Sbjct: 25 FLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPVPQNASSVLFFGGPLIL 84 Query: 72 VGVMLTIATALPVV--TVGSPLPQLGDLITLLYLFAIARFF---FAISGLDTGSPFTAIG 126 + + L+ +P TV S + I +LY+F ++ ++G + S + +G Sbjct: 85 LILSLSAWFVIPFNNETVVSDIN-----IGILYVFMVSSLNTLNIIVAGWSSNSRYAFLG 139 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 A R + E ++ + + ++GS N I W + + L A F Sbjct: 140 ALRSIAQVIAYEVVIGIIIINIIVLSGSLNFLKIV-----WA-QKDLWYAFVLWAQFFLF 193 Query: 187 FI----EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 FI E + PFDLAEAE EL G E+S F + Sbjct: 194 FIAMLAETNRHPFDLAEAESELVSGYNVEHSSVLFALF 231 >UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax=Eukaryota RepID=NU1M_NEUCR Length = 371 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 23/207 (11%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG-PDASGWVFRLTPYVMVGVMLT 77 R A + R GP G+LQ + D +KLL ++ V A+ +F L P + + L Sbjct: 32 RKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEYVALTQANMTLFFLGPVITLIFSLL 91 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAI---ARFFFAISGLDTGSPFTAIGASREAMLG 134 V+ G L + +LY+ A+ A + ++G S + +G+ R A Sbjct: 92 ---GYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILLAGWSANSKYAFLGSLRSAAQL 148 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF----ATFIEM 190 + E +L + + + GS N+ T++ +++ VL L + E Sbjct: 149 ISYELVLSSAILLVIMLTGSFNLGVNTES------QRAVLFVLPLLPIFIIFFIGSIAET 202 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGF 217 + PFDLAEAE EL G ++E++ F Sbjct: 203 NRAPFDLAEAESELVSGFMTEHAAVVF 229 >UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=Crassostrea RepID=Q9T7K1_CRAGI Length = 340 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 17/206 (8%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVM 75 + R + L R GP G+ Q D +KL ++ V P S + F L P V M Sbjct: 55 MERKCLSSLGIRLGPDKISFAGLAQPISDGMKLFTKEFVAPSNSAKLGFFLIPCV---AM 111 Query: 76 LTIATALPVVTVGSPLPQLG-DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 L + S P +G D++ L + ++ +SG + S + ++G R Sbjct: 112 LLCFLGWQIYPCSSTSPSMGNDILFFLVVSSVNAHVAIMSGWTSSSKYASVGGVRGFAQV 171 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYH--WPLSQSIPLVLALCACAFATFIEMGK 192 + E L + L +GS + +++D+ + W L + L + C E + Sbjct: 172 ISYEICLSITLVAVMFFSGSMSFFSLSDSGWSMWWGLYCAPVAALWVVIC----LAEANR 227 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFG 218 PFDL EAE EL G +E+S F Sbjct: 228 APFDLVEAESELVSGFNTEFSAGSFA 253 >UniRef50_UPI000008E4AB NADH dehydrogenase subunit 1 n=1 Tax=Triticum aestivum RepID=UPI000008E4AB Length = 247 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 16/123 (13%) Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF----- 239 ++ E +LPFDL EAE+EL G +EYSG +G+ + +S L+V +FV V Sbjct: 105 SSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLF-YLVSYLNLLVSSLFVTVLYLGGW 163 Query: 240 ---IPWGQMETF----TAGGLL---LALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 IP+ F A G+L + + I + K + + + ++ R+R+D + Sbjct: 164 NLSIPYISFFDFFQMNKAVGILEMTMGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNL 223 Query: 290 TWA 292 W Sbjct: 224 GWK 226 >UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Heteroconchia RepID=Q06SB9_9BIVA Length = 314 Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust. Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 32/284 (11%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVM 75 + R R+GP G+ Q D +KL+ + P ++ ++F L P++M Sbjct: 32 VERKGLGHFQLRQGPNKPSIKGIAQALADGVKLMLKGCFFPGNSEKYLFFLGPFLMFSFS 91 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 P S + + + L A+ + I G + S + +GA R + Sbjct: 92 YGFWLIFPCYH--SSIFYESSMAYYMCLVALGVYGVFICGWSSNSSYALLGAMRALAQSI 149 Query: 136 LVEPMLLLGLWVAAQVAGSTNISN--ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKL 193 E +L + +G ++++ +T +Y S+ + A A E + Sbjct: 150 SYEVVLGTLILCPCLYSGGLSVNSFLMTKGLYG---GLSVEIFFLWMAVLLA---ETNRA 203 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVM---KWG-ISLKQLVVLQMFVGVFIPWGQMETFT 249 PFD E E EL G E+ G GF ++ ++G I ++ +F G F Sbjct: 204 PFDFVEGESELVAGFNVEFGGFGFALIALAEYGSILFSSVLTGVLFFGSFFE-------- 255 Query: 250 AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 G+L ++I++ + + L I L + R R D +W G Sbjct: 256 --GILSGVLISVWGVFLSYLFI-LVRATFPRFRYDKLMSFSWKG 296 >UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pichia farinosa RepID=C7U009_PICFA Length = 313 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 17/204 (8%) Query: 25 RVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLT 77 R A + R GP G+L D KLL ++ + P A ++ ++P + + T Sbjct: 27 RKTLAYMQRRVGPNAVGYYGLLMAMADAAKLLLKEMILPTHADKFILLMSPVITLVSATT 86 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 +P + I L + ++ F +G S ++ +G+ R + Sbjct: 87 SWAVIPFAPGVTIFDSNYGFIISLAMGSVGVFGSLFAGWSANSKYSLLGSIRATAQMISY 146 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI----EMGKL 193 E +L + + G+ N+S + L ++I L L + F+ E + Sbjct: 147 ELVLTTVMLMCMLFGGTMNLSRYVE------LQETIWFFLPLLPTSIIWFMGCVAECARP 200 Query: 194 PFDLAEAEQELQEGPLSEYSGSGF 217 PFD EAE EL G ++EYS S F Sbjct: 201 PFDNVEAESELVSGHMTEYSSSIF 224 >UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sinergasilus polycolpus RepID=C1INF9_9MAXI Length = 307 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 27/199 (13%) Query: 34 RRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVT 86 R GP G LQ + D +KLL ++ +++ +F L+P + ++L + P+ Sbjct: 38 RLGPNKVSLIGFLQPFADALKLLTKEYFTLFNSNILLFYLSPALSFVIILMLWFMFPMGL 97 Query: 87 VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR--------EAMLGVLVE 138 + LL + + + + +SG + S + +G R E ++ Sbjct: 98 ASMSFKY--SFLLLLMIMSFSVYPILLSGWSSNSKYAMLGGMRSVAQTISYEISFAFILM 155 Query: 139 PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLA 198 ++++ + V ++ S+ + + ++ +PL LV+ L C E + PFD A Sbjct: 156 FLMIMNMSVNLELKMSSYL--FSSVIFTFPL----ILVMWLVVC----LAESNRTPFDFA 205 Query: 199 EAEQELQEGPLSEYSGSGF 217 E E EL G EY GF Sbjct: 206 EGESELVSGFNVEYGAGGF 224 >UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=25 Tax=Formica RepID=Q8HET7_FORTR Length = 293 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 17/209 (8%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVM 71 L+ + R + R+GP G+ Q + D IKL ++ S + +F L P +M Sbjct: 3 FLTLLERKILGYVQMRKGPNKVMIIGMFQPFSDAIKLFNKELFYVYKSNYNLFYLCPVLM 62 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 VML P +T L L+ LL + F G + S ++ +G+ R Sbjct: 63 FSVMLMSWMLFPYITNIYFLNYSMLLLILLMSISGYTMIFM--GWSSNSIYSMMGSMRSV 120 Query: 132 --MLGVLVEPMLLLG-LWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 ML V + ++ L + ++ + N +Y W L PL L A Sbjct: 121 SQMLSYEVSFIFIIFILMIMSESYSFLDFMNYQ--IYVWYLFIFYPLFLMYFISVLA--- 175 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 E+ + P D E E EL G EY GF Sbjct: 176 ELNRSPMDFIEGESELVSGFNIEYFSGGF 204 >UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Trichinella spiralis RepID=Q9B8A1_TRISP Length = 299 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 32/204 (15%) Query: 32 HNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTP--YVMVGVM-LTIAT-- 80 R GP G++Q D +KL + + + +L P Y+++ +M LT+ T Sbjct: 34 QRRLGPNKVSITGLMQPILDGLKLTLKSTKKTN------KLNPTFYLLMPIMNLTLFTLF 87 Query: 81 --ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVE 138 LP++ +P+ +L+ + L I F +SG + S + G+ R + E Sbjct: 88 WWGLPLLY--NPISFQVNLLFTITLMGIMSFGIVLSGWVSNSKYATYGSLRSMSQSISYE 145 Query: 139 PMLLLGLWVAAQVAGSTNISNITDTVYHWP----LSQSIPLVLALCACAFATFIEMGKLP 194 L L + + S N++ Y++ L+ +IP + + A E + P Sbjct: 146 VCLSTTLLMIMMLKDSYNLATTKTGFYYFEPTITLALTIPATIMILA-------ETNRSP 198 Query: 195 FDLAEAEQELQEGPLSEYSGSGFG 218 FDLAEAE EL G E+S F Sbjct: 199 FDLAEAESELVSGFNIEFSSVEFA 222 >UniRef50_B6RQZ1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Abispa ephippium RepID=B6RQZ1_9HYME Length = 316 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 55/281 (19%), Positives = 120/281 (42%), Gaps = 34/281 (12%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG-PDASGWVFRLTPYVMVGVM 75 + R + +R GP G+ Q D IKL ++ +++ L+P M+G Sbjct: 37 LERKLLGYVQDRLGPNKVGFVGIFQSVSDAIKLFSKEEFFLYQFDYYMYYLSP--MIGFF 94 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAM 132 +++ L ++++ L L + LLYL + ++F ++ + S ++ +G R + Sbjct: 95 MSL---LLILSLPYNLNFLSMELFLLYLMSCLSMGGYWFLMASWASNSIYSMLGGIRSIV 151 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALCACAFATFIEMG 191 + E + + + + S +I + + L + + +++ + A E+ Sbjct: 152 QALSYEVCMFIMFLIMFLYSESYSIKMFMEFKCMFILVNMGMFMLIYISLLA-----ELN 206 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME-TFTA 250 ++PFD E E EL G +EY F + L +++ + V +F+ M FT Sbjct: 207 RMPFDFVEGESELVSGFNTEYMSGMFALFFLAEYLMMIIISMLLVILFLGLEMMSLKFTI 266 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 +++ + + +++ GVL R+R D+ + W Sbjct: 267 MVMVIMMSLIMIR---GVL---------PRMRYDLLMDLCW 295 >UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax=cellular organisms RepID=NUOH2_ACIBL Length = 354 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 31/227 (13%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDASGWVFRLTPYVMVGVM 75 + R R+ NR GP G+LQ D +K + ++ + P + ++ L P + V + Sbjct: 32 LERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDLLPPHVNKPLYILAPMLAVAMA 91 Query: 76 LTIATALP---VVTVG---SPLPQLG-------------DLITLLYLFAIARFFFAISGL 116 L + +P +T+G +PL G L+ +L + +I + A++G Sbjct: 92 LLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINIGLLIILGVTSIGVYGIALAGW 151 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT----VYHWPLSQS 172 + S ++ +G+ R + V E L L L ++GS ++ I ++W + Sbjct: 152 SSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSFSLREIVRLQQGGFWNWNIFGG 211 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 + A + + E ++PFDL EAE EL G +EYS F + Sbjct: 212 FQFI-AFFIYLTSAYAETNRIPFDLPEAETELVAGYHTEYSSMKFAM 257 >UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Eukaryota RepID=Q9ZY22_PEDMN Length = 310 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 31/234 (13%) Query: 23 ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV---GPDASGWVFRLTPYVMVG 73 I R A + RRGP G LQ D +KL+ + ++ G + S ++ +P++ Sbjct: 32 IERKVIAYIQRRRGPVFVGFWGALQSIADGLKLILKTNLSVFGIEKS--IYYASPFISFF 89 Query: 74 VMLTIATALPVVTVGSPLPQLGD--LITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + L +P+ L Q D L +L L +I + ++GL + S + +G R A Sbjct: 90 ISLLSWVFIPL----GFLLQDSDISLFFILALNSIGVYGILLAGLSSSSRWAFLGGLRSA 145 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI--- 188 + E L + ++ G +I + ++I LV L +FI Sbjct: 146 AQIISYELSLNICIFSIILCVGGLSIIKVVS------FQENILLVFPLLPFILISFIISL 199 Query: 189 -EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG----ISLKQLVVLQMFVG 237 E+ + PFDL EAE EL G +Y F G I L ++ ++F G Sbjct: 200 AEINRAPFDLPEAEAELVAGYNVDYGAINFTFFFLGEYTHIVLISFIMAKLFFG 253 >UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax=Protostomia RepID=A9NI38_9CAEN Length = 327 Score = 40.0 bits (92), Expect = 0.093, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 93/234 (39%), Gaps = 48/234 (20%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFR 65 VL AVA + + R + + R+GP G+ Q D KLL ++ P + + Sbjct: 15 VLLAVA-FFTLLERKGLSYMQLRKGPNKVGIMGLPQPIADAAKLLTKEIAKPTMANY--- 70 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD-------- 117 +PY V + + AL + + L LG Y FF +SG++ Sbjct: 71 -SPY-FVAPIFSFVLALLLWQLYPSLYSLG------YFKWGILFFLCVSGMNVYGTLLAG 122 Query: 118 --TGSPFTAIGASRE---------AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + S + +G+ R +M +L+ P+ L+G + +V S I Sbjct: 123 WASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGTFSFIEVKESQEI--------I 174 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 W IP+ L A E + PFD AE E EL G EY +GF ++ Sbjct: 175 WLSFLMIPVSLIWFVTCVA---ETNRAPFDFAEGESELVSGFNIEYGSAGFALI 225 >UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Inversidens japanensis RepID=Q94QP9_9BIVA Length = 292 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%) Query: 20 LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVG 73 L+ + R + + R+GP G+ Q D +KLL + + P + ++ Sbjct: 15 LTLLERKSLGYMQLRKGPNKLGLTGLPQPLADAMKLLTKTTSTPTICNPIAMSVAPLLAL 74 Query: 74 VMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 + + L T LG L+ + + A A + + G T S F +GA R Sbjct: 75 ALSALLWHLYPTTHSVSHKSLG-LLLFICISATAVYSIMVGGWSTNSKFALLGAMRAMAQ 133 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTV-YHWPLSQSIPLVLALCACAFATFIEMGK 192 + E ++L L ++ + ++S + + + IP+ L A E + Sbjct: 134 TISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLIIPMTLVWLTIMLA---ETNR 190 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVM 220 PFD AE E EL G EYSG+ F ++ Sbjct: 191 APFDFAEGESELVSGFNVEYSGTKFAML 218 >UniRef50_D2D0L0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Laodelphax striatellus RepID=D2D0L0_9HEMI Length = 317 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 166 HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 +W + P+ L L AC A E + PFD +E E EL G +EYS F Sbjct: 172 NWFILMGYPMFLILYACMLA---ETNRSPFDFSEGESELVSGFNTEYSSFNFS 221 >UniRef50_A4K9F1 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=1 Tax=Anisakis simplex RepID=A4K9F1_ANISI Length = 201 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 81/203 (39%), Gaps = 39/203 (19%) Query: 32 HNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPV 84 R GP GV D IKLL ++ + P +++ F L P V VM LP Sbjct: 12 QQRIGPNKVSFMGVFTAIXDGIKLLKKEQMTPLNSAETSFILVPGVFFSVMFLEWFVLPY 71 Query: 85 VTVGSPLPQLGDLITLLY--LFAIARFFFAI-----SGLDTGSPFTAIGASREAMLGVLV 137 D +T Y LF + F++ SG + S + +GA R + V Sbjct: 72 SF---------DFMTFEYSILFFLCLIGFSVHTTLVSGAVSKSKYGMVGAIRASSQSVSY 122 Query: 138 E---PMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLP 194 E + LL + + + + N++ V + P + +VLA E+ + P Sbjct: 123 EIAFSLYLLAIIIHINMFYFYSFFNLSLVVIYLPF---LFMVLA----------ELNRAP 169 Query: 195 FDLAEAEQELQEGPLSEYSGSGF 217 FD AE E EL G EYS F Sbjct: 170 FDFAEGESELVSGYNVEYSSVAF 192 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteob... 235 2e-60 UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycet... 231 2e-59 UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 230 4e-59 UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular or... 230 4e-59 UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular or... 230 4e-59 UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobac... 226 9e-58 UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria Rep... 222 1e-56 UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemm... 222 1e-56 UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirel... 221 2e-56 UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collins... 220 7e-56 UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi... 218 2e-55 UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=c... 215 1e-54 UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=B... 215 2e-54 UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella... 214 3e-54 UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexu... 214 3e-54 UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacte... 214 4e-54 UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=ce... 213 6e-54 UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria... 213 9e-54 UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidet... 212 1e-53 UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bact... 212 1e-53 UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=c... 211 2e-53 UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax... 211 2e-53 UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (Ec... 210 5e-53 UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=ce... 210 6e-53 UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=... 210 6e-53 UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomy... 209 9e-53 UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Ru... 209 1e-52 UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Ba... 208 2e-52 UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiph... 207 5e-52 UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 206 7e-52 UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Cone... 206 7e-52 UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=c... 206 9e-52 UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Ba... 206 1e-51 UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=... 206 1e-51 UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 205 2e-51 UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax... 205 2e-51 UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=... 204 2e-51 UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter ... 204 2e-51 UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen l... 204 3e-51 UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=F... 204 3e-51 UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 204 4e-51 UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter... 203 5e-51 UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyce... 203 7e-51 UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemm... 203 8e-51 UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (Ec... 202 1e-50 UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 202 2e-50 UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 ... 201 2e-50 UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Ga... 201 2e-50 UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=B... 201 3e-50 UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=B... 201 3e-50 UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rh... 201 3e-50 UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=... 200 4e-50 UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=... 200 4e-50 UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinom... 199 7e-50 UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 199 9e-50 UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=... 198 3e-49 UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 197 3e-49 UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=C... 197 5e-49 UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=... 197 5e-49 UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n... 196 7e-49 UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular or... 196 8e-49 UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=... 196 9e-49 UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 195 1e-48 UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter ... 194 3e-48 UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=B... 193 5e-48 UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Ta... 191 2e-47 UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n... 191 4e-47 UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=... 190 4e-47 UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=V... 189 9e-47 UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=c... 189 1e-46 UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteoba... 188 2e-46 UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteob... 188 2e-46 UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 187 3e-46 UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax... 187 4e-46 UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=... 187 4e-46 UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 187 5e-46 UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 186 6e-46 UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 186 6e-46 UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) ... 186 1e-45 UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 186 1e-45 UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 185 1e-45 UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n... 185 2e-45 UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase su... 184 3e-45 UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=... 184 3e-45 UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=An... 184 3e-45 UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Meth... 184 4e-45 UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax... 184 5e-45 UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermoco... 183 6e-45 UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Meth... 183 8e-45 UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 182 1e-44 UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 182 1e-44 UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Ta... 182 2e-44 UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 181 2e-44 UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Ta... 181 2e-44 UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmenta... 181 2e-44 UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (... 181 2e-44 UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 180 5e-44 UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=... 179 1e-43 UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloro... 179 1e-43 UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alph... 179 1e-43 UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoide... 178 2e-43 UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 178 2e-43 UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Acti... 178 3e-43 UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax... 177 4e-43 UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) ... 177 6e-43 UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=A... 176 7e-43 UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 176 8e-43 UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 176 9e-43 UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchae... 176 9e-43 UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 174 3e-42 UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bd... 174 4e-42 UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen l... 174 4e-42 UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=P... 173 1e-41 UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen l... 171 2e-41 UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen l... 171 2e-41 UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergis... 171 2e-41 UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=He... 171 3e-41 UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=... 171 3e-41 UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfit... 170 6e-41 UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=A... 170 6e-41 UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=... 169 1e-40 UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=M... 169 1e-40 UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Ta... 168 2e-40 UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus ... 167 5e-40 UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4... 167 6e-40 UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteri... 166 6e-40 UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=C... 166 7e-40 UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax... 166 1e-39 UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n... 165 1e-39 UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=A... 163 8e-39 UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit H... 163 9e-39 UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Acidulipr... 163 1e-38 UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 162 2e-38 UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 ... 161 2e-38 UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 161 2e-38 UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=D... 161 3e-38 UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 160 5e-38 UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 160 7e-38 UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n... 160 7e-38 UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=A... 159 1e-37 UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 158 3e-37 UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 158 3e-37 UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcace... 157 5e-37 UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 ... 156 7e-37 UniRef50_C6PUG6 Hydrogenase, membrane subunit 3-like protein (Ec... 156 9e-37 UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=E... 156 1e-36 UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax... 155 2e-36 UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n... 154 4e-36 UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=C... 154 5e-36 UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 154 5e-36 UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 153 6e-36 UniRef50_Q6APE9 Related to hydrogenase, component C-formate hydr... 152 1e-35 UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organ... 152 1e-35 UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasm... 151 2e-35 UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=S... 151 2e-35 UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 151 3e-35 UniRef50_A9FF80 Formate hydrogenlyase subunit n=1 Tax=Sorangium ... 151 3e-35 UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota... 151 3e-35 UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax... 151 4e-35 UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subuni... 150 5e-35 UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 150 6e-35 UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsi... 150 6e-35 UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n... 149 8e-35 UniRef50_A6UVJ9 Hydrogenase, component C-formate hydrogenlyase s... 148 2e-34 UniRef50_B6WWH2 Putative uncharacterized protein n=1 Tax=Desulfo... 148 2e-34 UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 148 2e-34 UniRef50_Q21TB7 NAD-dependent dehydrogenase subunit n=1 Tax=Rhod... 148 2e-34 UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina... 148 3e-34 UniRef50_A7HGW5 Respiratory-chain NADH dehydrogenase, subunit 1 ... 147 4e-34 UniRef50_B1ZSE0 Respiratory-chain NADH dehydrogenase, subunit 1 ... 147 4e-34 UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=U... 147 5e-34 UniRef50_C5CEV6 Respiratory-chain NADH dehydrogenase subunit 1 n... 147 5e-34 UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferr... 146 7e-34 UniRef50_A6Q2X3 Ni-Fe hydrogenase, membrane subunit HycD/HyfD n=... 146 1e-33 UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 146 1e-33 UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-li... 145 2e-33 UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobac... 145 2e-33 UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 ... 144 3e-33 UniRef50_C4KGS6 Formate hydrogenlyase subunit 4 (HycD) n=13 Tax=... 144 4e-33 UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 143 9e-33 UniRef50_D0WEF6 Putative Ech hydrogenase, subunit EchA n=1 Tax=S... 141 3e-32 UniRef50_B8J1E4 Respiratory-chain NADH dehydrogenase subunit 1 n... 138 2e-31 UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L... 138 2e-31 UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 137 4e-31 UniRef50_A3DNE8 Hydrogenase-4 component C n=1 Tax=Staphylothermu... 137 5e-31 UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 137 6e-31 UniRef50_B5Y905 Hydrogenase-4 component C n=1 Tax=Coprothermobac... 134 4e-30 UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=P... 133 7e-30 UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 ... 133 8e-30 UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=M... 131 2e-29 UniRef50_A7C247 Respiratory-chain NADH dehydrogenase, subunit 1 ... 131 2e-29 Sequences not found previously or not previously below threshold: UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 229 8e-59 UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Ac... 226 7e-58 UniRef50_B5GCW5 Truncated NADH-quinone oxidoreductase subunits H... 211 3e-53 UniRef50_Q47LF1 NADH-quinone oxidoreductase subunit H n=145 Tax=... 201 2e-50 UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 Re... 193 6e-48 UniRef50_C1ZFV5 NADH dehydrogenase subunit H n=1 Tax=Planctomyce... 192 2e-47 UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax... 191 3e-47 UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 190 6e-47 UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 186 6e-46 UniRef50_Q11RU2 NADH-quinone oxidoreductase subunit H 2 n=5 Tax=... 185 2e-45 UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax... 181 2e-44 UniRef50_B8Y2U8 NAD(P)H-quinone oxidoreductase subunit 1 (Fragme... 175 2e-42 UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomyce... 174 3e-42 UniRef50_Q08SR0 NADH-quinone oxidoreductase chain h n=3 Tax=Cyst... 174 5e-42 UniRef50_B2ULY6 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 173 9e-42 UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax... 168 2e-40 UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=... 168 2e-40 UniRef50_A9RAG3 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=S... 168 2e-40 UniRef50_D0LPX2 NADH dehydrogenase (Quinone) n=1 Tax=Haliangium ... 168 3e-40 UniRef50_A9UKA6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=G... 168 3e-40 UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 168 3e-40 UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax... 167 4e-40 UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular... 167 4e-40 UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 164 4e-39 UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=T... 158 3e-37 UniRef50_P11658 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=... 156 1e-36 UniRef50_B1ZRS6 NADH dehydrogenase (Quinone) n=3 Tax=Verrucomicr... 155 2e-36 UniRef50_Q6JCT2 NADH-ubiquinone oxidoreductase chain 1 n=20 Tax=... 152 1e-35 UniRef50_Q2IL08 Respiratory-chain NADH dehydrogenase, subunit 1 ... 152 1e-35 UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=L... 151 2e-35 UniRef50_B9LUF2 Respiratory-chain NADH dehydrogenase subunit 1 n... 151 3e-35 UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax... 151 3e-35 UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=I... 151 4e-35 UniRef50_Q8WF33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=V... 150 5e-35 UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=C... 150 5e-35 UniRef50_Q5W905 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=L... 150 5e-35 UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 149 1e-34 UniRef50_P48897 NADH-ubiquinone oxidoreductase chain 1 n=38 Tax=... 148 3e-34 UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=A... 147 4e-34 UniRef50_P48901 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=S... 147 5e-34 UniRef50_C3RYN6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=E... 146 8e-34 UniRef50_A8MB61 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga ... 146 1e-33 UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 146 1e-33 UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 145 2e-33 UniRef50_Q2WGD5 NADH dehydrogenase subunit 1 n=2 Tax=Tracheophyt... 144 3e-33 UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=E... 144 4e-33 UniRef50_C9V3N4 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=L... 144 5e-33 UniRef50_C8BPE3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 143 8e-33 UniRef50_O99824 NADH-ubiquinone oxidoreductase chain 1 n=14 Tax=... 142 1e-32 UniRef50_B5U6L1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=D... 140 8e-32 UniRef50_Q9B8G7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=H... 139 1e-31 UniRef50_C8YLY6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=A... 138 2e-31 UniRef50_Q68RK6 NADH-ubiquinone oxidoreductase chain 1 n=54 Tax=... 137 4e-31 UniRef50_Q85UH6 NADH-ubiquinone oxidoreductase chain 1 n=18 Tax=... 137 5e-31 UniRef50_Q8HQJ2 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=A... 134 3e-30 UniRef50_Q6SL32 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=A... 133 7e-30 UniRef50_A0MJG3 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 132 1e-29 UniRef50_D0Z5P3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 131 3e-29 UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 131 4e-29 >UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteobacteria RepID=Q3JMD4_BURP1 Length = 975 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 93/285 (32%), Positives = 143/285 (50%), Gaps = 3/285 (1%) Query: 21 SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIAT 80 +G RA L NRR P + Q YR + KL ++SV + + +FR PYV+ M Sbjct: 684 TGWVNQCRAWLQNRRAPSIWQPYRMLHKLFNKESVVAEHASPLFRGAPYVVWAAMALACA 743 Query: 81 ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 +P ++ P D I L+ LFA+AR +++ +D G+ F +GA RE ++G L EP Sbjct: 744 IVPTLSTELPFSPAADAIALVGLFALARVALSLAAMDIGTAFGTLGARREMLIGFLAEPA 803 Query: 141 LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 LL+ L+ A+ + ST +++I + H L+ L A A + E +LP D Sbjct: 804 LLMVLFSASLITRSTLLTSIVAALGHRELAIYPSLAFAGIAFTLVSLAENARLPVDNPAT 863 Query: 201 EQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLAL 257 EL E + EYSG +M+W SLK + + +F+PWG E + LLLAL Sbjct: 864 HLELTMIHEALILEYSGRHLALMEWAASLKLFAYSCIGLALFMPWGIAEAGSPLALLLAL 923 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 VKL+VG +A+ E + A++RL P + F A + + Sbjct: 924 PALFVKLLVGGAALAVVETTNAKMRLFRVPEFLASAFLLAVIGML 968 >UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycetales RepID=C7MTD4_SACVD Length = 441 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 26/326 (7%) Query: 5 YPLIQALVLFAVAPLLSG----ITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 L++A+V+ + P+L+ R A R+ NR GP G Q D IKL ++ Sbjct: 14 LILLKAVVILLIGPILTVFMIVWERKALGRMQNRPGPNRVGPNGWFQSIADAIKLPFKEQ 73 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVT---------VGSPLPQLGDLITLLYLF 104 V PD A ++ L P ++ + A+P V + ++ +L Sbjct: 74 VIPDTADRKIYFLAPMIVAVPAMIGLAAIPFGPEVTIFGERTVLQLIELPVSVLLILAGA 133 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G +GSP+ +G R A + E + L + A A S + I Sbjct: 134 SVGVYGIILAGWASGSPYPLLGGLRSAAQVISYEIAMGLSIVGVALYAQSLSTGEIVAAQ 193 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 H L+ + + E + PFDL EAE EL G +EYS F + Sbjct: 194 EHG--WYFYLLLPSFVIYLISMVGETNRAPFDLPEAESELVGGFHTEYSSMKFAMFFLAE 251 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLL----LALVIAIVKLVVGVLVIALFENSMAR 280 ++V +F+ L L L+ K + + ++ R Sbjct: 252 YCNMIIVSAFATTLFLGGWMFPFVGLDSPLNQGWLPLLWFFGKTFLLLFGFIWLRGTLPR 311 Query: 281 LRLDITPRITWAGFGFAFLAFVSLLA 306 R D ++ W L +V +++ Sbjct: 312 FRYDQFMKLGWKVLIPVALIWVMVIS 337 >UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U4_ACIFD Length = 420 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 22/312 (7%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYV 70 L + R + + NR GP G+LQ D IKL ++ + P+ + ++F+L PY+ Sbjct: 35 LLAIWVERKVISDMQNRIGPNRAGPFGLLQSLADGIKLFFKEDLIPERSDRFIFKLAPYL 94 Query: 71 MVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAISGLDTGSP 121 + T +P+ V ++ LL + +I+ + ++G +GS Sbjct: 95 SLVPAFLTFTIVPIGGVVDLFGHRTELQVADPPIGILLLLAMSSISVYGVMLAGWSSGSK 154 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL------ 175 + IG+ R + + E + L + V GS + ++ L Sbjct: 155 YPLIGSVRASAQMISYEAAMGLSIAAVVLVTGSLSTRDMVTGQLGTYLGFIPHWNLIRLG 214 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 V+ A E+ + PFDL EAEQEL G +EYS F + L + + + Sbjct: 215 VIPFVIFIVAITAEVNRPPFDLVEAEQELVGGFHTEYSSIRFALFYLAEYLNTITMSAIM 274 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V +F L +V +VK + ++ F ++ RLR D + W Sbjct: 275 VTLFFGGPDGPDPHVLHWLWPIVWFLVKTSIFFVIYVWFRAALPRLRYDQLMDLGWKVLI 334 Query: 296 FAFLAFVSLLAA 307 L ++ ++A Sbjct: 335 PVSLLWLLVVAG 346 >UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular organisms RepID=D2SHE7_9ACTO Length = 486 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 117/320 (36%), Gaps = 33/320 (10%) Query: 16 VAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTP 68 + R AR+ R GP G LQ D +KL ++ + P A V+ L P Sbjct: 37 MTLFAIVFERKVVARMQQRIGPNRVGPRGYLQSLADGLKLAFKEDIMPALADKPVYFLAP 96 Query: 69 YVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLYLFAIARFFFAISGLDTG 119 + + +P+ V S Q L + +L A+ + + G +G Sbjct: 97 VLATVPAFLAFSVIPLGPVVSIFGQQTPLQLTDAPIGVLIVLACSAMGIYGIVLGGWASG 156 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV------------YHW 167 S + +G+ R A V E + L + AGS + S I + Sbjct: 157 STYPLLGSLRSAAQMVSYEIAMGLSIVAVFLYAGSMSTSEIVAAQADGNQVSFFGLEFTG 216 Query: 168 PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 P +I L ++ A A E + PFDL EAE EL G +EYS F + + Sbjct: 217 PGWYAILLPVSFVIYAIAVVGETNRAPFDLPEAESELVGGFHTEYSSLKFALFFLAEYIN 276 Query: 228 QLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 + V + +F+ PW A L+ +K+V + V ++ RLR Sbjct: 277 MVTVSALAATLFLGGWRAPWPISIWDGANSGWWPLLWFFLKVVAALFVFIWLRGTLPRLR 336 Query: 283 LDITPRITWAGFGFAFLAFV 302 D R W A++ Sbjct: 337 YDQFMRFGWKVLVPVAFAWI 356 >UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular organisms RepID=A9F4Q4_SORC5 Length = 645 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 132/332 (39%), Gaps = 32/332 (9%) Query: 3 VLYPLIQALVLFAVAP---LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 +L + A++L +AP +++ + R AR+ +R GP G+L D IK + ++ Sbjct: 260 ILLGVAAAIILLFMAPTAGIITWVERRVSARMQSRIGPNRAGPQGLLVWVADGIKSIMKE 319 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 V P ++ +FRL PY++ + +P ++ ++ + ++ Sbjct: 320 DVIPAESDKALFRLAPYLVFVGVSATFVVMPFGQYLIAADLDIGILFVIAVTSLVTIGLM 379 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV-------- 164 G + + ++ +G R A + E + + + GS + +I Sbjct: 380 TGGWASNNKWSLLGGIRSAAQIISYEIPGAVAIVCIVMMTGSLRLQDIIGAQGGAGPSLL 439 Query: 165 ------YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 +HW + ++ E + PFDL EAE EL G +EYSG + Sbjct: 440 DVGGWPWHWFVFRNPITFALFFLYFTTALAEGNRAPFDLPEAESELVAGYSTEYSGMRYL 499 Query: 219 VMKWGISLKQLVVLQMFVGVFIPWGQMETFTA-------GGLLLALVIAIVKLVVGVLVI 271 + V+ + +F+ Q+ + G L+ + + ++K V V+ Sbjct: 500 FFFFAEWANVFVMCGIASALFLGGWQIPGVSPAQQEASFGLQLVGVFLFLLKSWALVFVV 559 Query: 272 ALFENSMARLRLDITPRITWAGF-GFAFLAFV 302 ++ R+R+D + W F +F AF+ Sbjct: 560 IWIRWTLPRVRIDQMMNLCWKWFVPLSFAAFL 591 >UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_ACIC1 Length = 451 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 121/328 (36%), Gaps = 23/328 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ L L + R AR+ R GP G+LQ D +KL ++ Sbjct: 30 LIIVKTLGVFAFLVLATLFMIWAERRVVARMQQRIGPNRVGPFGLLQSLADGLKLALKED 89 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLYLF 104 + P A VF L P + +P S +L + +L + Sbjct: 90 IVPTLADKAVFILAPVISATPAFLAFAVIPFGPTVSIAGHHTNLQLTDLPVAVLFVLAMS 149 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G +GSP+ +G R A V E + L +GS + S+I Sbjct: 150 SLGVYGIVLAGWSSGSPYPLLGGVRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQ 209 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 H + ++ A A E + PFDL E E E+ G +EY+ F + Sbjct: 210 AHR--WGILWAGVSFAVYAIAMVGETNRAPFDLPEGETEIVGGFHTEYTSLKFALFYLAE 267 Query: 225 SLKQLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMA 279 + + V + +F+ PW A ++ ++KL + + V ++ Sbjct: 268 YINMVTVSALMTTLFLGGWRAPWPLSLWSQANVGWWPVLWFLIKLGIVLFVFIWLRGTLP 327 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLAA 307 R R D + W L ++ + AA Sbjct: 328 RFRYDQFMQFGWKVLIPVNLTWILVEAA 355 >UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Actinomycetales RepID=NUOH_RHOSR Length = 450 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 119/326 (36%), Gaps = 24/326 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGI-TRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 VL + V + PLL+ + R A + R GP G+LQ D IKL ++ + Sbjct: 21 VLGKALAIFVFLVLTPLLTILAERKVMAWMQMRVGPNRVGPRGMLQSLADGIKLALKEGI 80 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL------ITLLYLFA--- 105 P ++ L P + +P S L + +LY+ A Sbjct: 81 VPKGVDKPIYILAPVIAAVPAFMAFAVIPFGPAVSIFGHYTPLQLTDLPVAVLYVLAATS 140 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 I + ++G +GS + +G R + E + L AG+ + S I Sbjct: 141 IGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALSFAAVFLDAGTMSTSGIVAAQE 200 Query: 166 HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGIS 225 H L+ + + E + PFDL EAE EL G +EYS F + Sbjct: 201 HT--WYVFLLLPSFLIYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLSFAMFMLAEY 258 Query: 226 LKQLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMAR 280 + + V + +F+ P+ A ++ +K+ + V ++ R Sbjct: 259 VNMVTVSALATTLFLGGWHAPFPLSLWDGANSGWWPVLWFTLKVWGFLFVFVWLRATLPR 318 Query: 281 LRLDITPRITWAGFGFAFLAFVSLLA 306 LR D + W L +V ++A Sbjct: 319 LRYDQFMGLGWKILIPISLVWVMIVA 344 >UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobacteriaceae RepID=C7MLM2_CRYCD Length = 309 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 131/300 (43%), Positives = 200/300 (66%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ ++QA++L +APL SG R RA++H RRGP LQ+Y D+IKL+ RQ + S + Sbjct: 4 IIIAIVQAVLLTLLAPLFSGTARWMRAKMHTRRGPSPLQDYYDLIKLIKRQDLHTKDSSF 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 V RL P + +G ML +A +P++T SP+P L D+IT++YL A+ RFFFA++G+D+ + Sbjct: 64 VSRLMPPLFLGSMLILACGMPMITRLSPVPVLADIITIIYLLALPRFFFALAGVDSSDAY 123 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G RE ++GVLVEP ++L L+VAA G+TN+ + + ++ I +V+A A Sbjct: 124 AGVGGIRELLVGVLVEPSMMLALFVAALACGTTNVGLMGAQIAEGNVTSPIAVVIAGVAF 183 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A A +IE+GKLPFD AEAEQE+QEGPL EYSG+ ++K +S+KQ++V+ FV +F+P+ Sbjct: 184 AMACYIELGKLPFDAAEAEQEIQEGPLQEYSGTSLSMVKLSMSMKQILVISWFVAIFLPF 243 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G T LL+ V+ +VK+ V L+ ++FEN +AR+R +T R TW G A +A V Sbjct: 244 GSAATLAPMDLLVGAVLFLVKITVIGLICSIFENVVARVRWKLTGRQTWTVVGVAVMALV 303 >UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria RepID=HYFC_ECOLI Length = 315 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 156/300 (52%), Positives = 218/300 (72%), Gaps = 1/300 (0%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 V++ L QA++L + PL +GI+R RAR+H+RRGPG+ Q+YRDI KL RQ V P +SG Sbjct: 11 VIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGL 70 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL P+V++ ML +A ALP+ SP GDLITL+YL A+ RFFFA+SGLDTGSPF Sbjct: 71 MFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPF 130 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +GASRE LG+LVEPML+L L V A +AGST+I I++T+ + + VLAL AC Sbjct: 131 AGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTL-AMGWNSPLTTVLALLAC 189 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 FA FIEMGK+PFD+AEAEQELQEGPL+EYSG+G + KWG+ LKQ+V+ +FV +F+P+ Sbjct: 190 GFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPF 249 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G+ + + LL +LV+ ++K+++ ++ ++ EN++AR R + +TW GF A LA+V Sbjct: 250 GRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWV 309 >UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y7_GEMAT Length = 418 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 129/328 (39%), Gaps = 29/328 (8%) Query: 7 LIQALVLFAV----APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +++ LV+F V +L+ + R A +RRGP G+LQ D IK ++ Sbjct: 1 MVKILVVFGVWMLTVAMLTLVERKLAAWFQDRRGPNRAGPGGILQPVADGIKNFMKEETN 60 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPV---------VTVGSPLPQLGDLITLLYLFAI 106 P A W+F + P + + +P+ + + P + +L + ++ Sbjct: 61 PPFADRWLFIIAPALAFIPAMLTWAVIPLAAPLPTPWGLIDMAVAPVPVGFLFVLAISSL 120 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + ++G + + + +G R + V E + + +AG+ +++ I Sbjct: 121 GVYGMVLAGWSSNNKYALLGGLRSSAQMVSYEIAMGMSTIPVLLLAGNVSLNTIVQQQAG 180 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 L +A A F E +LPFDL EAE EL G +EYSG F + Sbjct: 181 MG-WNVFSLTIAWFTFLVAAFAETNRLPFDLPEAESELVAGYHTEYSGMKFSMFFIAEYS 239 Query: 227 KQLVVLQMFVGVFIP--------WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSM 278 + V + +F W + FT L+ L+ +K + V ++ Sbjct: 240 NMITVSALTATMFFGGWDLPFTQWDNVAPFTVLKTLVTLIAFALKTGFFIFVFMWVRWTL 299 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSLLA 306 R R D + W+ LA++ ++A Sbjct: 300 PRFRYDQLMSLGWSIMLPVALAYIVIIA 327 >UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL02_9PLAN Length = 434 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 79/330 (23%), Positives = 135/330 (40%), Gaps = 29/330 (8%) Query: 3 VLYPLIQALVLFAV----APLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLG 51 +L +IQA++L V A + + R R+ +R GP G LQ D IKLL Sbjct: 19 LLAAIIQAVLLLHVIAVGAVVFIWMERKIAGRIQDRLGPTRTGGKFGWLQTLADGIKLLS 78 Query: 52 RQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++ + P DA +F+L PY+ + T ALP + + L ++ + + F Sbjct: 79 KEDLMPRDADPLLFKLAPYISLAASFTAFLALPFASGWVGVRLNIALFFVIAVLGLEVFG 138 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV----YH 166 ++G +GS ++ G R+A V E L + + V ++G+ ++ I D + Sbjct: 139 VILAGYGSGSKWSLFGGMRQAAQVVSYEVPLGICVVVPVLISGTMDLVTIADQQSGLFSN 198 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 W +L + + PFDLAEAE EL G L+EYSG + + Sbjct: 199 WLFFHDPFCMLLFWVYFTCGIASVNRAPFDLAEAESELVSGFLTEYSGIRWSLFFMAEYG 258 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGL------------LLALVIAIVKLVVGVLVIALF 274 +V + +F + L+ L ++K V+GV+V+ Sbjct: 259 SMFLVSGLAAILFFGGWNGPIPIFFWVPEGNFTLETLANLVGLGNFLLKAVLGVVVMMWV 318 Query: 275 ENSMARLRLDITPRITWA-GFGFAFLAFVS 303 ++ RLR+D + A F+ Sbjct: 319 RWTLPRLRIDQVISMCLKYCVPIAAFCFLG 348 >UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E719_9ACTN Length = 307 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 124/296 (41%), Positives = 187/296 (63%), Gaps = 1/296 (0%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+++ + Q LV+ VAP SG+ RV RA++HNRRGP +LQ+YRD+ KL+ R S Sbjct: 1 MNIVLAMAQGLVVMLVAPFFSGLARVIRAKMHNRRGPSILQDYRDLAKLMARPESVSSDS 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +V R+ P + + V +A LP+ T+ SP+P GD IT++Y A++RFFFA+SG+D+ + Sbjct: 61 SFVLRIMPPLFLAVSFMLAMGLPMFTLQSPMPVFGDAITIMYALALSRFFFALSGVDSSN 120 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 + G RE ++ VL+EP +L+ L+ A V GST+I+ + + +S + ++LA Sbjct: 121 AYAGFGGIRELLMSVLIEPSMLIALFTVAIVCGSTDIATMGQHIVTGNVSSVVAVILAGV 180 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A A A ++E+GKLPFD AEAEQELQEGPL+E SG +MK + +KQ+VV+ F +FI Sbjct: 181 AFAAACYMELGKLPFDQAEAEQELQEGPLAELSGPSLAMMKLAMGMKQVVVVAWFTSIFI 240 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 PWG+ T L+ V+ +VK +V +V + ENS++R R + TWA G Sbjct: 241 PWGEPATIGV-TALVGAVVFLVKCLVDFVVCGVLENSVSRSRFKVLGNQTWAVVGI 295 >UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi (class) RepID=B8G6Z9_CHLAD Length = 407 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 124/339 (36%), Gaps = 48/339 (14%) Query: 1 MSVLYPLIQALVLFAVA----PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLL 50 +++L +IQ V+ L+ R ARL NR GP G LQ D +KL Sbjct: 4 LTILIIVIQCFVITLAVTTAFAYLTLFERRLLARLQNRVGPNRAGPAGFLQPAADAVKLF 63 Query: 51 GRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVV-----------------TVGSPLP 92 ++ + P A V+ L P + V L I +P + + L Sbjct: 64 FKEDIVPALADKPVYLLAPALAVIPALIIWAVIPFGCLNLNWDYQACYDPNRTNLWNILQ 123 Query: 93 QLGDLITLLYLFAI---ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAA 149 I +LY+ AI + ++G + + ++ +G R + + E L + Sbjct: 124 ITDLNIGVLYILAITSIGVYGITLAGWASNNKYSMLGGIRSSAQLISYELALGCAVLSVV 183 Query: 150 QVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPL 209 G+ + I W L IP +L A E+ + PFDL EAEQEL G Sbjct: 184 MTYGTLSTHEIIAQQRGW-LWGIIPQLLGFFLYMIAATAEVVRAPFDLVEAEQELTGGYN 242 Query: 210 SEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG----------------L 253 +EY F + +K + V + V F G Sbjct: 243 TEYGSMKFALFFMAEYIKLIAVSALAVTFFFGGWHFPGLDILGREVTALAGPVAGSIVFG 302 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +++L ++K+VV + + S RLR D + W Sbjct: 303 IVSLGSFLLKVVVFLFISVWVRASWPRLRYDRLMDLGWK 341 >UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=cellular organisms RepID=NUOH_ORITB Length = 356 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 123/309 (39%), Gaps = 9/309 (2%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DA 59 + + L L+ R A + R GP G+LQ D IKL+ ++ + P A Sbjct: 29 IALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFKEPIIPAKA 88 Query: 60 SGWVFRLTPYVMVGVMLTIATALPV-VTVGSPLPQLGDLITLLYLFAIARFFFAISGLDT 118 +F + P + + L + +P+ + +G ++ +L + ++ + I+G + Sbjct: 89 DRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWAS 148 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLA 178 S + +GA R A + E + L + V G ++ I + P+ +I ++ Sbjct: 149 NSKYAFLGAVRSAAQMISYELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTIMMLPL 208 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 + + +LPFDL EAE EL G EYS F + G ++ + + Sbjct: 209 AVIYFISILAKTNRLPFDLPEAESELVAGYNVEYSSMAFAMFFLGEYANMILGSSLMTIM 268 Query: 239 FIPWGQME-TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F+ + + I+K+ + + ++ R R D + F Sbjct: 269 FLGGYLPPFNLEILTFIPGYIWFILKVSMVLFCFLWIRATLPRYRYDQLMYLGLKVFLPI 328 Query: 298 FLAFVSLLA 306 LA++ +++ Sbjct: 329 VLAWIIVVS 337 >UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=Bacteria RepID=NUOH_BREBN Length = 336 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 112/304 (36%), Gaps = 10/304 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ ++ V+ R + R GP G+LQ D+ KLL ++ + Sbjct: 19 IIAAVLLLAVVLGFVTYAIYFERKVIGWMQLRIGPNRVGPLGLLQTVADVAKLLLKEDIR 78 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F L P + + +P L+ + L I +G Sbjct: 79 PQHADKALFTLAPILAYAPAFAVLAVMPFTDSIRFADLGIGLLYYIALSGITVLGVITAG 138 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ IG R A + E L++ + + GS N+ +I + + +P Sbjct: 139 WASNNKYSLIGGLRSAAQMISYEVPLVMSVVGIVLLTGSMNLKDIVEAQRD--VWNIVPQ 196 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + A E+ + PFDL EAE EL G EYSG F + + + + Sbjct: 197 FIGFAVFIIAAQAELNRTPFDLPEAESELVGGYHVEYSGFRFAMFMLAEYVYMFGMGALI 256 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F G + + + +V I+K V V + +M RLR+D W Sbjct: 257 TILFFG-GWLPIHPSLDFIPGIVWFILKFSVYVFLQFWIRATMPRLRVDQLMSFAWKVLL 315 Query: 296 FAFL 299 L Sbjct: 316 PVAL 319 >UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella RepID=C9LCZ0_9BACT Length = 366 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 17/311 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 SV+ LI + A L + R R GP G+LQ + D+ K+L ++ + Sbjct: 33 SVIVALIIITLYAVFAIALIYMERKVCGFFQCRLGPNRVGKWGLLQVFGDVFKMLTKEII 92 Query: 56 -GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 ++ + P+++V + LP G + + + + +I ++ Sbjct: 93 RMRNSDRLLHDFAPFLVVVASMLTFACLPWNKGGHIIDFNIGIFFFIAVSSIGVVGILLA 152 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS---Q 171 GL + + ++ IGA R + E + L + + G+ IS I Y + Sbjct: 153 GLSSNNKYSLIGAMRSGAQLISYEVSIGLTMLTMVAMTGTMQISEIVQQQYDNGWNIVRG 212 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 IP + A A E + PFDL E E EL G +EYSG FG L + Sbjct: 213 HIPALFAFIIYMIAGNAECNRGPFDLPEGESELTAGYHTEYSGMHFGFYYLAEYLNLFIT 272 Query: 232 LQMFVGVFIPW-------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 + +F+ G A + + + K V ++ + RLR+D Sbjct: 273 AGIAATLFLGGWAPLHIPGLEGFNIAMDYVPGAIWFVGKTFFVVFLLMWERWTFPRLRID 332 Query: 285 ITPRITWAGFG 295 + W Sbjct: 333 HILSLEWKYLM 343 >UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexus RepID=B8GA12_CHLAD Length = 440 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 48/347 (13%) Query: 1 MSVLYPLIQALVLFAVAPL----LSGITRVARARLHNRRGP------GVLQEYRDIIKLL 50 + +L ++ ++ VAPL + R AR+ +R GP G+ Q D +K+ Sbjct: 22 LRLLSYILIVTIVLIVAPLQMLFFTYYERRVIARMQDRIGPNRVGPEGIWQPIADGVKMF 81 Query: 51 GRQSVGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARF 109 ++ + P A V L P V+V + + +P +P+ L+ + +I+ Sbjct: 82 TKEDIVPQAADRIVHFLAPCVVVAPTVLMFAVVPWGPGMTPVDLPTGLLFFFAVSSISAV 141 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY---- 165 ++G + + F+ +GA R V E +L L + GS +++ I Sbjct: 142 GLMMAGWASNNKFSLLGAMRAVAQMVSYEIPAVLSLIAIVIIVGSLSLNEIIAYQSGLLI 201 Query: 166 -------------HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 W + + V A A A E + PFD+ EA+ E+ G ++EY Sbjct: 202 SNRDLPGIPDLGLGWFVFTPVGFV-AFIAFFIAALAEGERTPFDIPEADSEIVAGYMTEY 260 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET-------------------FTAGGL 253 SG FG+ + ++ + +F Q F Sbjct: 261 SGMKFGLFYLAQYVLNFLLCAITAIIFFGGWQGPGVNWLYAQAITPANPNGNGVFNVLAG 320 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 +L + ++K V V+ + RLR+D W LA Sbjct: 321 VLGVFYFLLKTYVFFFVMVWLRGAFPRLRIDQLMDFGWKFLIPLTLA 367 >UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK9_9CORY Length = 446 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 123/332 (37%), Gaps = 34/332 (10%) Query: 5 YPLIQALVLFAVAPLL----SGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 LI+A++ FA+ L+ R A + +R GP G+LQ D +K + ++ Sbjct: 15 LILIKAIIFFALPLLMAIVTVWYERRLLAFMQSRLGPNMAGPIGLLQPMSDGVKTIFKED 74 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLYLF 104 P +VF L P++ T + LP+ S L + +L + Sbjct: 75 FMPKGVDKFVFTLAPFITGTAAFTTWSVLPLGGRVSIFGHETQLQNGDLPVAVLFILAVA 134 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + + ++G + S ++ +G R A + E + L + VAG+ + I + Sbjct: 135 GLGTYGLVLAGWSSTSRYSLLGGLRAAAQMISYEISMGLAVVAVVLVAGTMSTLGIVEAQ 194 Query: 165 YHW----------PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 P + L+ A E + PFD+ E E EL G ++YSG Sbjct: 195 SETLTLFGWESPLPAWNFLILMPAFLIFCVTMLAEANRAPFDMPECESELVGGYGTDYSG 254 Query: 215 SGFGVMKWGISLKQ----LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLV 270 F + G + + +F+G F + G ++ I+K+ + + Sbjct: 255 FRFAMFYLGEYMNMGTLSAICATLFLGGFHAPWPLNGTALDGGWWGIMWFIIKVAIMLFF 314 Query: 271 IALFENSMARLRLDITPRITWAGFGFAFLAFV 302 ++ R R D + W L F+ Sbjct: 315 FIWVRATVPRYRYDQLMDVGWKTLLPLALGFL 346 >UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=cellular organisms RepID=NUOH_PROAC Length = 440 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 130/340 (38%), Gaps = 33/340 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGR 52 + ++ +I ++L A R A++ NR GP GV Q D +KL+ + Sbjct: 13 LIIVKVVILFVILLAWTIFNVWFERRVLAKMQNRIGPIMNSAWAGGVFQAVGDGLKLIFK 72 Query: 53 QSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL------ITLLYLFA 105 + + P A VF L P + + +P+ S L + +L++ A Sbjct: 73 EMLTPKGADKIVFNLAPVIAGIACFASWSVIPLGGQVSMFGHTTRLQITDVPVAVLFILA 132 Query: 106 IAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD 162 +A + ++G + ++ +G+ R + + E + L L +GS + S I + Sbjct: 133 VASIGIYGVVLAGWSSAGTYSLLGSLRSSAQMISYEVAMGLSLVTVFIFSGSMSTSQIVE 192 Query: 163 TVYHWPL----------SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 + + + + L+ + F E +LPFDL E E EL G ++EY Sbjct: 193 SQANHLVVGGFDTHIAGHYWLLLIPSFVIYVITMFGESNRLPFDLPECESELVSGYITEY 252 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVG 267 SG +G+ + + + +F+ PW L+ +K + Sbjct: 253 SGFPYGMYFLAEYINMATLSAVCTTLFLGGYRAPWPLNYFGVIDSGWWGLLWFFLKTQLV 312 Query: 268 VLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 + ++ R R D + W L +V L+AA Sbjct: 313 IFFFVWVRAAIPRFRYDHFMDLGWKVLIPVSLGWVLLVAA 352 >UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria RepID=C1F217_ACIC5 Length = 402 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 114/305 (37%), Gaps = 15/305 (4%) Query: 2 SVLYPLIQALVLF-AVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++L ++ L +F + L + + R R+ NR GP G+LQ D IK L ++ Sbjct: 34 AILLIIVPILAIFPGLFALTTVLERKGLGRMQNRFGPNRVGPLGLLQPVADGIKALTKED 93 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A + L P V+V LP+ + ++ + + + Sbjct: 94 IVPRSADALLHFLAPVVIVCTAFLAYAVLPIGRNMIAVHLDAGILFFFAIGSATELAVFM 153 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ +GA R + E L+L +AG+ + I + Sbjct: 154 AGWSSRNKYSLLGAMRAIAQMISYEIPLILSSVAVIMIAGTLSPEQIVTAQAGFTGIFPH 213 Query: 174 PLVL------ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 V A E + PFDL E E E+ G EYSG F + L+ Sbjct: 214 WYVFTPWGFAGFFLFMTAAAAETNRSPFDLPEGESEIIAGYFIEYSGFKFALFFLAEYLE 273 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 V + + +F+ G F+ + + KL+V + ++ RLR+D Sbjct: 274 IFAVSGLGITLFLG-GWSAPFSFLTWIPSWCWFFAKLLVLIATFIWIRGTLPRLRMDQLM 332 Query: 288 RITWA 292 W Sbjct: 333 NFAWK 337 >UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidetes RepID=D2QGQ8_9SPHI Length = 384 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 110/323 (34%), Gaps = 32/323 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ + +A + R A L +R GP G+LQ D K+ ++ P Sbjct: 11 IIILVIFGITLLIATYSTYAERKVAAFLQDRLGPNRAGPWGLLQPIADAGKMFFKEDFIP 70 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVV------TVGSPLPQLGDLITLLYLF---AIA 107 AS W+F L P + + L + +P P+ + I +LY+F ++ Sbjct: 71 SQASKWLFILGPCLAMLTALMSSAVIPFGDSIRFDNYSIPVQGIEINIGVLYIFGVVSLG 130 Query: 108 RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW 167 + + G + + F+ +GA R A + E L L + + GS ++ I D + Sbjct: 131 VYGIMVGGWASNNKFSLLGAIRAASQNISYEIALGLSMIAILMMTGSLSVRAIVDQQASF 190 Query: 168 PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 L F E + PFDL E E EL G +EYS G + + Sbjct: 191 FEWNIFTQPLGFVIFLTCAFAECNRTPFDLPECETELVGGYHTEYSSMKLGFYLFAEYIN 250 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGLLL----------------ALVIAIVKLVVGVLVI 271 V ++ G L V+ K+ + Sbjct: 251 MFVSSAFVSALYFGGFHYPFMNEVGSALERSMGAITGHNIATAIGFVVFFGKIFFFIFFF 310 Query: 272 ALFENSMARLRLDITPRITWAGF 294 ++ R R D + W Sbjct: 311 MWVRWTLPRFRYDQLMNLGWKTL 333 >UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bacteria RepID=B5YKI6_THEYD Length = 333 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 117/315 (37%), Gaps = 14/315 (4%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ +L + R + R GP G+LQ D++KL+ ++ + Sbjct: 10 AIVKTVVYFGILMLHVAYATYAERKIIGHIQLRLGPMVVGPHGLLQPIADVVKLIFKEDI 69 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P VFR P + + L+ +PV L+ ++ + I + S Sbjct: 70 IPIKVDRIVFRTAPLISLTAALSTFAVIPVDKNWVIADINVGLLYVIGIAGIGTYGIIFS 129 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSI 173 G + S + +G R A + E L L L +A S N++ I + W Sbjct: 130 GWASNSKYAFLGGLRSAAQMISYEVALGLSLVGVILMAESFNLTEIVNRQAELWYGMFLF 189 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++ A E +LPFDL EAE EL G EYSG F + L + Sbjct: 190 PQIIGYFVFVVAMLAETNRLPFDLPEAETELVAGYFVEYSGIRFSLFYLAEYLAMFCMSA 249 Query: 234 MFVGVFIPWGQMETFT-----AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 + F + G++ +V ++K+ + + ++ R R D Sbjct: 250 LATICFWGGWTVPPILIKALPLLGVIPGIVWFLLKVYFHIFLFFWLRGTLPRYRYDQLMA 309 Query: 289 ITWAGF-GFAFLAFV 302 I W A L V Sbjct: 310 IGWKILIPLALLNIV 324 >UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=cellular organisms RepID=NUOH_DEIDV Length = 390 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 19/310 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++V+ + L L ++ + R R R GP G+LQ D IK + ++ Sbjct: 10 ITVVKAVAVILALLTTFAYMTLVERKLLGRFQIRVGPNRVGPMGLLQPAADAIKSIFKED 69 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL-------PQLGDLITLLYLFAI 106 + A V+ L P + +G+ LT +P GS ++ LL L ++ Sbjct: 70 LQVTLADKLVYTLAPIIAIGMALTAFGGIPAGPEGSLFGENPWVYNLDAGVLALLALTSM 129 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + + G +GS + +G R + + E + L + + GST ++I Sbjct: 130 GVYGIFLGGWASGSKYPMLGGLRSSAQMISYELGMGLSILGLLMLVGSTRFTDIVLWQGA 189 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 + L ++F E + PFDL EAEQEL G L+EYS + + + + Sbjct: 190 NG-WMILFQSLGFALFLISSFAETNRTPFDLVEAEQELVAGYLTEYSAIKWALFQMAEYV 248 Query: 227 KQL----VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 + ++ +F G + G + G + ++ +VK+ + V ++ RLR Sbjct: 249 NMITASALMSTLFFGGWRGPGFLNGIIPGIADIPILWLVVKIGFFLFVFIWVRATLPRLR 308 Query: 283 LDITPRITWA 292 D R W Sbjct: 309 YDQLMRFGWK 318 >UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax=cellular organisms RepID=NU1M_ARATH Length = 325 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 10/292 (3%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVM 71 L R A + R+GP G+LQ D +KL+ ++ + P ++ + +FR+ P Sbjct: 22 FLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVAT 81 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + L +P L+ L + ++ + I+G + S + +GA R A Sbjct: 82 FMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRSA 141 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 V E + L L GS N+S I + IPL L + E Sbjct: 142 AQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQ--IWFGIPLFPVLVMFFISCLAETN 199 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI-PWGQMETFTA 250 + PFDL EAE EL G EYS GF + G +++ + F+ W + Sbjct: 200 RAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLFFLGGWLPILDLPI 259 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 + + +K++ + + + R R D + W F LA+V Sbjct: 260 FKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWV 311 >UniRef50_B5GCW5 Truncated NADH-quinone oxidoreductase subunits H/I n=2 Tax=Streptomyces RepID=B5GCW5_9ACTO Length = 470 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 119/333 (35%), Gaps = 33/333 (9%) Query: 5 YPLIQALVLFAVAPLLSGI------TRVARARLHNRRGP------GVLQEYRDIIKLLGR 52 + L+ +F A L+ + R + R GP G+LQ D KL+ + Sbjct: 29 WWLVAIKAVFCFAFLMISVLFAIVWERKVVGWMQLRIGPNRTGPWGMLQSLADGAKLMLK 88 Query: 53 QSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLY 102 + + A V+ + P V +P G+ + G I +LY Sbjct: 89 EDLLVKRADKAVYIIAPVVAAIPAFMAIAVIPFGPAGNEISVFGHRTAMQLTDLPIAMLY 148 Query: 103 LFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN 159 + A A + ++G +GS + +G R + E + +GS + S Sbjct: 149 ILATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLYSGSMSTSA 208 Query: 160 ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 I D + L ++ E + PFD+ E+E +L G +EYS F + Sbjct: 209 IVDAQNGR--WYIVLLPVSFLLYIVTMVGETNRAPFDMPESEGDLVGGFNTEYSSIKFAM 266 Query: 220 MKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL------LLALVIAIVKLVVGVLVIAL 273 + + V + +F+ + + ++ +VK+ + + Sbjct: 267 FMLAEYVNMVTVSSVAATLFLGGWRAPWPISTFWEGANHGWWPILWLVVKVQLLLFFFIW 326 Query: 274 FENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 S+ R+R D ++ W + ++ L+A Sbjct: 327 LRGSLPRVRYDQLMKLGWKVLIPVSVVWLMLVA 359 >UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=2 Tax=cellular organisms RepID=Q0W2B6_UNCMA Length = 313 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 166/309 (53%), Gaps = 5/309 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + ++Q+ + A++PL++G+ R +A + +R+G V Q Y D+ KL ++SV + Sbjct: 5 QIALIVLQSAFIVAISPLITGVIRKLKALMQSRKGASVFQPYFDLYKLFRKESVVSSNAS 64 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVF LTPYV + +L +PV++ S L +GDLI ++Y+ + RFF A+S LDTGS Sbjct: 65 WVFHLTPYVCMAAVLVAVLMVPVISTTS-LSFMGDLIVVVYMLTMMRFFMALSALDTGSA 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALC 180 F +G+SRE + + EP +LL ++ A +AG+T++ +I+ + L P L L Sbjct: 124 FGGMGSSREMTISAIAEPTMLLAIFTMALIAGTTSLGDISYQLSVNGLELIRPSLFLGFA 183 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A T E ++P D EL EG + EYSG +M+ +K + L + Sbjct: 184 ALFIVTLAENARVPVDNPATHLELTMIHEGMILEYSGKQLALMELSSMVKLALFLTILAN 243 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 VF+PWG + GL + LV +VK+++ IA E+ MA+LRL P + F A Sbjct: 244 VFLPWGIATSLAPAGLAIGLVALLVKILIMAGAIAYIESCMAKLRLFRLPNLLTVSFTLA 303 Query: 298 FLAFVSLLA 306 LA +S Sbjct: 304 LLAVMSYYI 312 >UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=cellular organisms RepID=NUOH_LEPBA Length = 356 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 114/310 (36%), Gaps = 28/310 (9%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWV 63 V+ + R + +R GP G+ Q D IK + ++ + P + S + Sbjct: 18 FVILTGVAYYTLAERKFAGFIQDRPGPNRAGPFGIFQPLADGIKFIAKEEIFPKNVSKGM 77 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSP--------------LPQLGDLITLLYLFAIAR- 108 + L P + + + +P L +LY+ AI+ Sbjct: 78 YLLAPTISMTCAIMAWAVIPFGGTLPAPEWLTTLTGVATIDLQIANPDSGVLYMLAISSL 137 Query: 109 --FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + I+G + + ++ +G R + E + L + + GS +++I+D+ Sbjct: 138 SVYGIMIAGWSSNNKYSLLGGVRSTAQMISYELPMGLSIVAIVIMTGSLKLTDISDSQKD 197 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 S P +A A F E +LPFDLAEAE EL G +EY F + + Sbjct: 198 MWNILSPPGFVAFFIYVTAMFAETNRLPFDLAEAESELVVGFHTEYGAFKFALFFLAEYM 257 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGG----LLLALVIAIVKLVVGVLVIALFENSMARLR 282 + + + +F + G + L I+K++ + ++ R R Sbjct: 258 NMITMSCLTTLLFFGGYNVPFQLGAGSEYQAFIGLGFFILKVLFFAFLFIWVRWTLPRFR 317 Query: 283 LDITPRITWA 292 D ++ W Sbjct: 318 YDQLMKLGWK 327 >UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=Deltaproteobacteria RepID=NUOH1_SYNFM Length = 329 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 109/300 (36%), Gaps = 14/300 (4%) Query: 4 LYPLIQALVLFAV----APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 + ++ +++ A A L + R R+ R GP G+LQ D IKL+G++ Sbjct: 10 VRLIVGLVIILAFSQLNALFLVWLERKVAGRIQLRPGPMEVGPHGLLQTIMDGIKLVGKE 69 Query: 54 SVGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 + P + +F L P ++ +L LP ++ + Sbjct: 70 LITPRSVDRKLFILAPVLVFMPVLVGFLVLPFGPGLILRDMNVGILLIFSFSTFTVLAIL 129 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 G + + + +GA R V E LLL + + S S I Sbjct: 130 AGGWASNNKYALLGAIRSVGQNVAYEIPLLLTVMSVVLMVNSMRFSEIVAAQGRVWFIFL 189 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 P +A E + PFD+ EAE EL G +EY+G FG+ +V Sbjct: 190 QP--VAGLLYLICATAETNRAPFDIPEAESELVAGFHTEYTGMRFGLFFLAEYTNMFIVT 247 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +F G F L +V ++K V + VI + R+R D +W Sbjct: 248 AVATSLFFG-GWHGPFGFDFGLPGVVWFLIKTYVLIFVIMWVRWTFPRIRFDQLMNFSWK 306 >UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMG8_9ACTO Length = 500 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 121/330 (36%), Gaps = 28/330 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 VL + L L + R AR+ R GP G+ Q + D +KLL ++ + Sbjct: 23 VLKAAFIIVFLIMNVLLALWVERRGLARMQTRLGPNRVGPLGLGQAFADAVKLLIKEDLW 82 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVT------VGSPLPQLGDLITLLYLFAIAR- 108 A ++ + P+V T+ +P+ +PL + +L++ AIA Sbjct: 83 LKGADKIIYFVAPFVGAVCAFTVMAVVPMGPNVSIFGHSTPLQLADSPVAVLFVLAIAAL 142 Query: 109 --FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + + G S G+ R A + E L L L AG+ ++S I Sbjct: 143 GEYGLVLGGWSAHSTLPFYGSVRGATQMISYELALGLSLVTVFLTAGTMSMSGIVAAQSD 202 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 L + L A + F E +LPFDL EAE E+ G +EYS F + Sbjct: 203 --LWNIVTLFPAFVVYLISMFGETNRLPFDLPEAEGEIVAGHTTEYSSMKFAWFFLSEYI 260 Query: 227 KQLVVLQMFVGVFIPWGQMETFT----------AGGLLLALVIAIVKLVVGVLVIALFEN 276 L V + VF+ + + T L + K + + Sbjct: 261 NMLNVSMVATTVFLGGWRADPITTSVFSLWGGNPNTGWLPALWFFGKTWTLMFFMIWTRG 320 Query: 277 SMARLRLDITPRITWAGFGFAFLAFVSLLA 306 ++ R+R D + W L ++ L+A Sbjct: 321 TLMRMRYDHFMKFGWKVLIPVSLTWLVLVA 350 >UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOH_RUBXD Length = 331 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 8/301 (2%) Query: 10 ALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGW 62 ++ +A +L+ R A + R GP G+LQ D++KL +++V P A W Sbjct: 21 IFLVLNIAAVLTLAERKVSAYIQLRYGPNRVGPRGLLQPAADVVKLFIKENVSPGRADRW 80 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 VF P M + +P L+ + +I ++G + S F Sbjct: 81 VFLAAPIAMFLPAAAVWLVIPFGPGMVVADLNIGLVYFFAITSIGALGVIMAGYGSRSNF 140 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI-PLVLALCA 181 + +GA R A + E L+L L A + GS ++ +I + + I P + A Sbjct: 141 SLLGALRGAGQMISYEVPLILSLLGVAMLTGSLSMVDIVEYQAGGFWNWIIWPQLPMFLA 200 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 + E+ ++PFDL E E E+ G + EYSG + +++ V+ + +F+ Sbjct: 201 FFVSGLAEVKRIPFDLPEGESEIVGGFMIEYSGMTWALIQASEFASMAVMSAVASTLFLG 260 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 Q + + +K + + V ++ RLR+D + W + + Sbjct: 261 GWQPPLPFLDLGVFNWLWLGIKTTLLIFVFQWIRWTLPRLRMDQLMDLGWKILVPVTILW 320 Query: 302 V 302 + Sbjct: 321 L 321 >UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Bacteroidetes RepID=NUOH_FLAJ1 Length = 350 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 110/303 (36%), Gaps = 25/303 (8%) Query: 14 FAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRL 66 +A + R A L +R GP G+LQ D +KL ++ P+ + ++F + Sbjct: 21 MIMAMYSTWAERKVAAFLQDRVGPNRAGWGGLLQPLADGMKLFSKEEFFPNTPNRFLFVV 80 Query: 67 TPYVMVGVMLTIATALP------VVTVGSPLPQLGDLITLLYLF---AIARFFFAISGLD 117 P + + L + +P + L I LLY+F ++ + I G Sbjct: 81 GPAIAMSTALMTSAVIPWGDRLHLFGKDIILQATDVNIALLYIFGVLSVGVYGIMIGGWA 140 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 + + F+ +GA R A V E + L + + G+ ++ I++ L Sbjct: 141 SNNKFSLMGAVRAASQMVSYEIAMGLSMIALLMMTGTMSLKVISEQQAGMN-WNVFYQPL 199 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + +F E + PFDLAE E EL G +EYS G + + + Sbjct: 200 SFLIFLICSFAETNRTPFDLAECENELIGGYHTEYSSMKMGFYLFAEYASMFISSTIISV 259 Query: 238 VFIPWGQMETFTA--------GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 +F LL + + VK+ + ++ R R D + Sbjct: 260 LFFGGYNYPGMQWMVDNVGVNTANLLGIAVLFVKICFFIFFYMWVRWTIPRFRYDQLMNL 319 Query: 290 TWA 292 W Sbjct: 320 GWR 322 >UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B482_HERA2 Length = 413 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 25/328 (7%) Query: 1 MSVLYPLIQALVLFAVAP-----LLSGITRVARARLHNRRGP------GVLQEYRDIIKL 49 +SVL I + L V L+ R A + + +RRGP G+LQ + IK Sbjct: 14 LSVLIASIIKVTLILVGGSVGMMFLTWYERRAISYMQDRRGPNRVGPQGLLQPISEAIKT 73 Query: 50 LGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR 108 + ++ P +A V L P VM+G + +P + P+ ++ ++ + Sbjct: 74 MTKEDATPREADRIVHFLAPVVMLGATVLSFAVIPWGRMF-PVDLNAAVLFVIATGGLHS 132 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---- 164 ++G + + F +G R + E ++ + + GS ++ I + Sbjct: 133 IGMMMAGWGSNNKFALLGGMRGVAQLISYEIPQVMAIIPVVLMTGSMSLQKIVEAQNDFG 192 Query: 165 -YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG 223 W + + L L A+ E + PFD+ EA+ E+ G ++EYSG F V Sbjct: 193 GLGWFVFSPVGL-LGFALFFTASLAEGERTPFDIPEADSEIIAGYMTEYSGMKFAVFYLS 251 Query: 224 ISLKQLVVLQMFVGVFIPWGQMETFTAG----GLLLALVIAIVKLVVGVLVIALFENSMA 279 + L V + +++ G A G LL+L+ ++K ++ L ++ Sbjct: 252 NYMSNLAVCFITATLYLGGGNGPGVDALGGFAGGLLSLIYFLLKSFALFFIMVLIRATVP 311 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLAA 307 RLR+D W L V++L+A Sbjct: 312 RLRVDQLMGFAWK--FLLPLVLVNILSA 337 >UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWK6_9PLAN Length = 455 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 81/342 (23%), Positives = 127/342 (37%), Gaps = 38/342 (11%) Query: 3 VLYPLIQALVLFAV----APLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLG 51 VL I +L V A + + R R+ +R GP G LQ D +KL+ Sbjct: 30 VLAAAIHIGLLIQVVAVGALVFIWMERKIAGRIQDRLGPTRVGGKFGWLQTLADGLKLIA 89 Query: 52 RQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++ V P DA +F+L PYV T ALP + + ++ + + F Sbjct: 90 KEDVTPKDADRLLFKLAPYVSFAASFTAYMALPFSSGWVAQDVNIGVFFIVAVLGLEVFG 149 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 ++G +GS ++ G REA V E + + + + + G+ N+ I D W + Sbjct: 150 VILAGYASGSKWSLFGGMREAAQVVSYEVPIGMCIVIPVVILGTMNLVTIGDMQAGWFTN 209 Query: 171 QSIPLVLALCACAFATF----IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 I A F F + + PFDLAEAE EL G +EYSG + Sbjct: 210 WLIFNDPFTFAVFFVYFTCATASVNRAPFDLAEAESELVAGFHTEYSGLRWSFFFMAEYG 269 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLAL---------------------VIAIVKLV 265 +V + +F G +L V I K V Sbjct: 270 SMFLVSGLAAILFFGGWNGPIPLFGPEMLGWAYTPESTSWSILGYIATLAGCVNFIGKTV 329 Query: 266 VGVLVIALFENSMARLRLDITPRITWA-GFGFAFLAFVSLLA 306 + V V+ ++ RLR+D + A F+ +A Sbjct: 330 LFVTVMMWVRWTLPRLRIDQVMTVCLKYCVPLAAFCFIGAVA 371 >UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31279 Length = 348 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 126/308 (40%), Gaps = 18/308 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ ++ LV F + PL + R R+ R GP G LQ DI KLL +Q Sbjct: 22 IQIIKAVVIFLVGFTLVPLALMLDRKLMGRMQMRYGPNRVGPFGALQPMADIGKLLFKQQ 81 Query: 55 VGPDAS-GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL------ITLLYLFA-- 105 P S G++F + P + + A+P L I +LY+FA Sbjct: 82 FRPRTSVGFLFAVAPAISMVCAAAAFAAIPFGDTVDIFGAKVGLYGIDVSIGILYIFAWS 141 Query: 106 -IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + + G +GS ++ +GA R A + E + L L AG+ +++ I + Sbjct: 142 ALSVYGLMLGGWASGSKYSFLGAMRSAAQLISYEVSMGLSLIGVVITAGTLSLTGIVEAQ 201 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + IP + C A F E G+ PFDL+EA+ EL G +EY G F Sbjct: 202 A--GMWYIIPQFIGFCIFLVAAFAETGRPPFDLSEADAELVGGYSTEYGGGRFASYYAAE 259 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 ++ + V +F + + ++ +VK V+ + V + R R D Sbjct: 260 YFHMVIASAIAVTMFFGGWMLPFGIDPPQWVDPIVVLVKTVLVICVFVWARTTFPRPRYD 319 Query: 285 ITPRITWA 292 + W Sbjct: 320 QLMSLGWK 327 >UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=cellular organisms RepID=NUOH_VESOH Length = 357 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 119/308 (38%), Gaps = 14/308 (4%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFR 65 L V + R + R GP G LQ D +KL+ ++ + P + ++F Sbjct: 39 LMLVVAYFTYAERKVIGYMQLRIGPNRVGPKGWLQPIADALKLMTKEIIFPTKANIYLFL 98 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 L P + + + + +P L+ +L + +I + ++G + S + + Sbjct: 99 LAPVLAIAPAIAVWAVIPFDESIYITNLDISLLYVLAIGSIGVYGIILAGWASNSKYPLL 158 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALCACAF 184 GA R A L V E ++ L +AGS N++ I + IPL + Sbjct: 159 GALRSAALLVSYEIVIGFALVTVVMIAGSVNLNTIVQAQQGGIIYWYFIPLFPIMIIFFI 218 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 ++ +E + PFD+ E E E+ G EYSG F V +++ + V +F Sbjct: 219 SSLVETNRAPFDVVEGESEIVGGTHVEYSGMTFAVFFLAEYANMILMAVLSVIMFFGGWH 278 Query: 245 ME------TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 + + ++ + K + + + R R D ++W F Sbjct: 279 SPFEAIPYLESVFSWIPGMIWLLAKTTFFMFLYLWVRATFPRFRYDQIMHLSWKVFLPIT 338 Query: 299 LAFVSLLA 306 + ++ ++A Sbjct: 339 IIWIFVVA 346 >UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Bacteroidales RepID=NUOH_AZOPC Length = 355 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 127/320 (39%), Gaps = 16/320 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 VL + + +A LL + R A R GP G+ Q D+IK+L ++ + Sbjct: 30 VLIAFVILIAYAVLALLLIYLERKVCAFFQCRLGPTRVGPWGIFQSVADMIKILLKELIR 89 Query: 57 PDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + +F L Y+++ + A+P + + LL + +I ++G Sbjct: 90 INKVDVCLFHLATYIVIIASICTFGAIPFDKGLHVVDFNIGVFYLLSVSSIGVVGILLAG 149 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-HWPLS-QSI 173 + + +T IGA R + E L L ++GS +S+I + W + I Sbjct: 150 WASNNKYTIIGAIRSGAQLISYELSCGLSLMTVVMLSGSLQLSSIVEQQSCGWNIVRGGI 209 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++A A E + PFDL EAE EL G +EYSG FG L ++ Sbjct: 210 PAIIAFIIYLIAGHAETNRGPFDLPEAESELTAGYHTEYSGIQFGFFYLAEYLNMFIIAA 269 Query: 234 MFVGVFIPW-------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + +F+ G + +++ VK + + + +M RLR+D Sbjct: 270 IATTLFLGGWMPLHIPGWNLFNEVMDFIPSILWFFVKTFICIFLALWVRWTMPRLRIDQL 329 Query: 287 PRITWAGFGFAFLAFVSLLA 306 + W L + L+A Sbjct: 330 LNLEWKILMPISLINIILMA 349 >UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=Bacteria RepID=NUOH2_SYNFM Length = 331 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 24/289 (8%) Query: 22 GITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS-GWVFRLTPYVMVGV 74 + R ARL R GP G+LQ DI+K++ ++ P+ + +F L P V+ Sbjct: 31 WLERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTVPEGAERTIFMLAPAVVAAT 90 Query: 75 MLTIATALPV------VTVGSPLPQLGDLITLLYLFAIAR---FFFAISGLDTGSPFTAI 125 L + +P + PL + LLY FA++ + A+ G + S ++ + Sbjct: 91 ALLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSLGVYGVALGGWASNSKYSLL 150 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G R A + E L L + A S ++ +I +P + P +A + Sbjct: 151 GGIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEKYPFILTQP--VAFAIFVIS 208 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 E+ ++PFDL EAE EL G +EYSG FG+ G + V+ + +F+ Sbjct: 209 AMAEIKRIPFDLPEAENELGAGFHTEYSGMRFGLFFLGEYVNMQVLGGLVAVLFLGGWH- 267 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G LL +V +K+V+ L++ ++ RLR D + W Sbjct: 268 -----GPLLPPVVWLFIKIVLVALIMIWVRGTLPRLRYDQLMALGWKVL 311 >UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Blastocystis sp. DMP/02-328 RepID=B5SQ69_9STRA Length = 330 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 118/303 (38%), Gaps = 14/303 (4%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFR 65 + ++ + R + R+GP G+LQ D +KL+ ++ + P + + ++F Sbjct: 19 VLIGVAYMTLVEREILGSIQRRKGPNVVGPSGILQPLADGLKLMLKEIILPTNVNTFLFI 78 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 L P + + LP+ + ++ + ++A + ++G + + + + Sbjct: 79 LAPVITFTGTMLYWAILPLSKGVTYTDFNVGVLFFYAISSLAIYGIILAGWASNTKYPFM 138 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G+ R V E + V GS N + I + + IPL A Sbjct: 139 GSIRSTAQMVSYELSIGTVFAVIFLCTGSLNFTKIVLAQQY--IWFCIPLFPLFIIFLIA 196 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 E + PFDL EAE EL G +EYS GF + G +V+ + + + G + Sbjct: 197 LLAECNRHPFDLPEAEGELVSGFNTEYSAMGFALFFIGEYGNIIVMSTL-ISILFCGGWL 255 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG---FGFAFLAFV 302 F + ++ +K+ + + + R R D RI W F + F+ Sbjct: 256 PLFGL-TCIPGIIWLCLKICFFISFYVVVRGAYVRFRYDQLMRIGWKSLLPLCFGWFIFI 314 Query: 303 SLL 305 S L Sbjct: 315 SGL 317 >UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax=Proteobacteria RepID=NUOH2_NITMU Length = 366 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 115/320 (35%), Gaps = 16/320 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------------GVLQEYRDIIKL 49 +VL + L L L+ R + R GP G Q D +K Sbjct: 26 NVLLIVAIVLPLMLAVAYLTFAERKIIGYMQLRVGPNRVTFFGIPWLGGWAQPIADAVKA 85 Query: 50 LGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR 108 + ++ + P A+ +F L P + L +P L+ +L + ++ Sbjct: 86 VMKEIIIPSGANKVLFVLAPILTFAPALAAWAVIPFSPDVVLADINAGLLYILAMTSMGV 145 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 + I+G + S + +GA R A V E + L ++ S N+ +I Sbjct: 146 YGIIIAGWASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSQSLNLGDIVKGQQGAS 205 Query: 169 L--SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 + IPL + E + PFD+AE E E+ G EYSG F V Sbjct: 206 MLNWYLIPLFPMFLVYFISGVAETNRAPFDVAEGESEIVAGFHVEYSGMAFTVFFLAEYS 265 Query: 227 KQLVVLQMFVGVFI-PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDI 285 ++V + +F+ W L+ + I+K + F + R R D Sbjct: 266 NMILVAMLASIIFLGGWLPPVNVAPFTLVPGFIWLILKASFLLFCFLWFRATFPRYRYDQ 325 Query: 286 TPRITWAGFGFAFLAFVSLL 305 R+ W F L ++ +L Sbjct: 326 IMRLGWKVFIPITLVWIVVL 345 >UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=cellular organisms RepID=NUOH_PSYWF Length = 348 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 8/299 (2%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 A L+ R A +R GP G LQ D++K+ ++ P A ++F L P Sbjct: 43 AALMIIYERRMLALWQDRYGPNRVGPWGSLQLVADMLKIFFKEDWTPKFADKFMFILAPA 102 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 V + L +PV + ++ + +A + G + + ++ +G R Sbjct: 103 VAMFTALASFAIIPVSPMLGVADWNIGILFFFAMAGMAVYAVMFGGWASQNKYSLLGGLR 162 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI-PLVLALCACAFATFI 188 A + E L L L + GS N+ +I +I P L A Sbjct: 163 SAAQTISYEVFLGLSLMGVVAMTGSFNLRDIVVAQQGGFWHWNIFPQFLGFLTFVVAGVA 222 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF 248 + PFD EAEQEL EG EYSG FG+ G + +++ + +F Sbjct: 223 VTHRHPFDQPEAEQELAEGYHVEYSGMKFGMFFIGEYVNVVLISALMTCLFFGGWDAPLN 282 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 +L ++K + + + L S+ R R D W L + + AA Sbjct: 283 LGFTILPPAFWFMIKTLFFMTMFVLARGSLMRPRYDQVMNFGWKVCLPVTLINLMITAA 341 >UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter RepID=A7ZBL0_CAMC1 Length = 306 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 8/289 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L + Q +V+ VAPL G+ R RA+L +++G Q YRDIIKL R P+ S Sbjct: 3 TILLMIFQVVVIVLVAPLFDGMARKLRAKLQSKQGSDFFQTYRDIIKLFRRGRTVPECSH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPV-VTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 WVFR P+ + + A+P+ + + D+ +LYL A+ RF F + +D+G+ Sbjct: 63 WVFRWAPFFLFATSAAVLAAIPITYSKDTVFGAYSDIFVILYLGALLRFVFGAASMDSGN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLAL 179 PF A G RE MLGV VEP++++ L V A ++N+ I + V + IP +A Sbjct: 123 PFAATGGGREQMLGVYVEPVMIMCLIVVMLAAKTSNLVEIQEMVRTGVIGYQIPSFAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A + ++E G+ PFDLAEAEQELQEG L EY+GS G+++ + LKQ ++ +F+ +F Sbjct: 183 IAFLWCMYVETGRKPFDLAEAEQELQEGVLGEYAGSDLGLVQASLILKQFAMIGLFLSIF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 PW F LA+++ ++K V + +N R ++ + R Sbjct: 243 EPWNFSNPF------LAIIVFVIKTGVFYVAAVFIDNFGPRFKMTSSLR 285 >UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ8_THEYD Length = 304 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 11/305 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + ++ L++ ++P G TR RA + +R GP LQ Y DIIKL+G++ + Sbjct: 7 IFSSIVNILIVLILSPFFDGFTRKVRALIQSRIGPPPLQSYYDIIKLMGKEDLK-STINP 65 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL+PY+ + + + +P+ + PL GD+ +Y+ + I+ + +PF Sbjct: 66 LFRLSPYLSIISIGMASLLIPITELTPPLNFWGDIFLFIYIITVVGIAIIITASASENPF 125 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 IGASR+ ML + VEP+L + L A AGS I +I ++++ ++ ++L+ Sbjct: 126 AYIGASRKMMLHLSVEPILAIALITGAINAGSFKIGDIV--LWYYSNGPNVSMLLSTVCV 183 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 + +GK+PFD++EAEQE+ EG L E SG + +KW +Q++ +F +F+PW Sbjct: 184 FLSLQALIGKIPFDISEAEQEIAEGVLIELSGPKYACVKWANMSRQVLFCLVFTQIFVPW 243 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 +E LL ++IA+VK+ + + L E RLR+D + A + Sbjct: 244 PFLE-----NDLLNILIALVKVTAIIFISTLIEALNPRLRIDQALKY---NLTLALFSLT 295 Query: 303 SLLAA 307 S+L A Sbjct: 296 SILLA 300 >UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=Firmicutes RepID=NUOH_DESHY Length = 351 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 125/300 (41%), Gaps = 14/300 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M+++ ++ +V+ A LL + R R GP G Q D +KLLG++ Sbjct: 34 MTLIGMILIIVVIVISALLLIVLERKIAGWGSQRPGPNRLGPRGWFQTIADALKLLGKED 93 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P +A +F++ P + G+ + T +P + + + L + +++ + Sbjct: 94 LTPANADRIMFKIAPMFIFGIPILTLTIIPFGYAMTVIDLELGVFFYLGITSVSTLALLM 153 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ +G R + E L+ L + + N++ I + P Sbjct: 154 AGWSSNNKYSLLGGMRAVAQMISYEIPLIFSLLGVVMLTQTFNLTKIVEAQAALPFIFLQ 213 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P +A E+ + PFDL EA+QE+ GP +EY+G +G+ G + + Sbjct: 214 P--IAFIIFLICGQAEVNRAPFDLLEADQEIIAGPFTEYTGLRWGLFYLGEYANLVAMCA 271 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + VF+ Q G+L +K+ + + + + R+R+D + W Sbjct: 272 LATTVFLGGWQGP-----GVLPGWAWFWLKVGLLIFISMWVRWTFPRIRIDHLMHLAWKV 326 >UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_GRABC Length = 342 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 126/314 (40%), Gaps = 10/314 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ L L + L + + R A + R+GP G+LQ + D K+L +++ Sbjct: 18 ITALQALAILVPLMLMVAYATVFERKVLAAIGLRKGPNVVGPWGMLQAFADAGKMLLKET 77 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + PD A+ +F L P + + + +PV + ++ L + ++ + I Sbjct: 78 IIPDGANKVLFILAPLLTFILAMIAWAVVPVNDGWAVANINVGVLYLFAISSLGVYGVII 137 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +GA R A V E + + GS N++++ H + + Sbjct: 138 AGWASNSKYAFLGALRAAAQMVSYEVSIGFVMVAILLCVGSLNLNDVVLAQKH--VWFVL 195 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P++ + E + PFD+ E E E+ G + EYS + + G ++ Sbjct: 196 PMLPMAVIFFISGLAETNRSPFDIVEGESEIVAGHMVEYSAMAYALFFLGEYANMFMICA 255 Query: 234 MFVGVFI-PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 M +F+ W + + ++K+ + V ++ R R D R+ W Sbjct: 256 MTTLLFLGGWLPPFDIVPLNWVPGPIWFVLKVCALMFVFFWVRGTVPRYRYDQLMRLGWK 315 Query: 293 GFGFAFLAFVSLLA 306 F L ++ L A Sbjct: 316 VFLPFSLVWLLLTA 329 >UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZV7_DYAFD Length = 359 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 118/347 (34%), Gaps = 41/347 (11%) Query: 1 MSVLYPLIQALVLFAVAPLL-------SGITRVARARLHNRRGP------GVLQEYRDII 47 M+++ L++ + AV L + R + +R GP G+LQ D Sbjct: 1 MTLVEFLVKTATIVAVFGLTLVIAMYSTWAERKVAGFIQDRSGPNRAGWGGLLQPLADAG 60 Query: 48 KLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVG------SPLPQLGDLITL 100 K+ ++ P A+ W+F P + + L + +P + L + I + Sbjct: 61 KMFFKEDFIPALANKWLFIAGPSLAMLTALLASAVIPFGSTFRINGHEVALQGVESNIGI 120 Query: 101 LYLF---AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNI 157 LY+F A+ + + G + + F+ +GA R A + E + L L ++ S ++ Sbjct: 121 LYVFGVVALGVYGIMVGGWASNNKFSLLGAIRAASQNISYEVAMGLSLIAILMMSSSLSL 180 Query: 158 SNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 I + + L +F E ++PFDL E E EL G +EY Sbjct: 181 GEIVAQQHGMNWNIFY-QPLGFIIFITCSFAECNRVPFDLPECETELVGGYHTEYGSMKL 239 Query: 218 GVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA----------------GGLLLALVIAI 261 G + + + + ++ L+ + Sbjct: 240 GFYLFAEYINMFISSAIISVLYFGGYNYPGMDFVYDQLVKSFGTEVGHNIATLIGTAVFF 299 Query: 262 VKLVVGVLVIALFENSMARLRLDITPRITWAGF-GFAFLAFVSLLAA 307 K + V ++ R R D + W A + AA Sbjct: 300 GKALFFVFFYMWVRWTIPRFRYDQLMNLGWKKLIPLAIFNIIITGAA 346 >UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAT3_PLALI Length = 419 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 127/324 (39%), Gaps = 37/324 (11%) Query: 1 MSVLYPLIQALVLFAVAP-LLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGR 52 ++VL + +FAV+P + R R+ +R GP G LQ D IKL+ + Sbjct: 26 LAVLIHTLLLFHVFAVSPAFFIWLERKVSGRIQDRLGPTRVGGKFGWLQSVADGIKLIQK 85 Query: 53 QSVGPDASG-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFF 111 + + P A+ W+FRL PY+ + T+ LP + + + L + ++ Sbjct: 86 EDLAPAAADQWLFRLAPYLALVASFTVFMVLPFSRGWAAVVIESSVFLALAIISLEVLGI 145 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-----H 166 ++G +GS + G+ REA V E L L + G+ N I + + Sbjct: 146 ILAGWSSGSKWALFGSMREAAQMVSYEIPLALCALIPVMAVGTLNFVTIAEVQSGFFLTN 205 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 W + +A + + PFDLAEAE EL G +EYSG + Sbjct: 206 WLIFHDPFTFVAFFVYFTVAIASVKRAPFDLAEAESELVAGFHTEYSGMRWSYFFLAEYA 265 Query: 227 KQLVVLQMFVGVFIPWGQMET--------------------FTAGGLLLALV---IAIVK 263 L V + V +F+ T F+AG L L+ I + K Sbjct: 266 SMLSVSCVAVLLFLGGWWSGTGLEDLLAPVRNWGQNFPVQGFSAGNYALNLLGAHIFLFK 325 Query: 264 LVVGVLVIALFENSMARLRLDITP 287 + V V ++ RLR+D Sbjct: 326 ASLLVTVQIWVRWTLPRLRIDQVM 349 >UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DD3 Length = 400 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 111/298 (37%), Gaps = 20/298 (6%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPY 69 A L R AR+ +R GP G+LQ D +KL+ ++ V P A +FR PY Sbjct: 37 AFLGIWAERKVSARMQDRLGPTRVGPFGLLQSLADGVKLIAKEDVAPQAADKLLFRAAPY 96 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 + ALP + +L + + F ++G + S ++ G R Sbjct: 97 IAFCASFCGFLALPFGSQFVAQNLSVGAFFVLAVLSSEVFGIVLAGYASASKWSLFGGVR 156 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNI----TDTVYHWPLSQSIPLVLALCACAFA 185 EA V E + + V +AG+ N++ I ++W + +A Sbjct: 157 EAAQVVSYEVPRAMCVVVPVCLAGTLNLNTIGAQQVGWFWNWNVFHDPFTFVAFFVFFIT 216 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 + PFDLAEAE EL G +EYSG + V + +F+ Sbjct: 217 AVASCKRAPFDLAEAESELVAGFHTEYSGIRWSYFFLAEYGSMFAVSGLAALLFLGGWHS 276 Query: 246 ETF---------TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G +L + + + K VLV+ S+ RLR+D F Sbjct: 277 GVLPFEPSVEFGFWPGTVLNVAVFVGKCWALVLVMIWMRWSLPRLRIDQVMTTCLKYF 334 >UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=3 Tax=Bacteria RepID=B1ZSE4_OPITP Length = 314 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 158/301 (52%), Gaps = 4/301 (1%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTP 68 Q +L +APL+SG+ + +A+L NRRGP V Q Y D++K L + V + W+F +TP Sbjct: 11 QTALLLGLAPLVSGVIKNWKAKLQNRRGPRVWQPYLDLLKFLRKDMVVSEHVSWIFGVTP 70 Query: 69 YVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 V++ L +P++TV +P+ GD + L+ L A+ RF A+SGLD S F +G+S Sbjct: 71 VVLLLTALAAGLLVPMITVQAPMDLFGDALALVGLLALGRFCLALSGLDPASTFGGMGSS 130 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL-VLALCACAFATF 187 RE + + EP ++L ++ A AGSTN+S+I + + P LA A Sbjct: 131 REMTISAVAEPAMMLAIFAVALTAGSTNLSHIVQASEGFGWNFLDPAHALAFAAMFVVLL 190 Query: 188 IEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 E G++P D EL E L EYSG +++W +S+KQLV++ + +F P G Sbjct: 191 AETGRIPVDNPATHLELTMIHEAMLLEYSGRHLALIEWAVSVKQLVLMALLANIFFPLGL 250 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 T L L L VKL++ I L E + A+LRL P + F A LA VS Sbjct: 251 AGEATPAALALGLGFFAVKLLLLAGAIVLVEFTNAKLRLFRVPDLLSTAFILATLALVSS 310 Query: 305 L 305 Sbjct: 311 F 311 >UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY0_FIBSS Length = 373 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 120/309 (38%), Gaps = 18/309 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +V+ + +V AP+L + R A + R GP G LQ D+IK+L ++ Sbjct: 44 AVICIIAVCVVNIGSAPILIYMERKVCAHVQCRLGPMRLGWHGTLQTIADVIKMLFKEVY 103 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A +F L P +++ + +P + ++ + + Sbjct: 104 APSGADKLMFYLAPLIVLIAPFIVCALIPFDKNLVVADVSMGIPLIIAVNGFGVLGILLG 163 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-----WPL 169 G + + ++ +GA R + E + L ++GSTN+ +IT W Sbjct: 164 GWSSNNKYSLLGALRSGAQMISYEISFAMILLFVVMISGSTNLMSITMGQEGTIFDWWIF 223 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 + +A ++ EM + PFD+AEAEQEL G +EY+G+ F + + + Sbjct: 224 KIPVLGFIAFILFFISSTAEMNRAPFDIAEAEQELTGGYHTEYNGTPFAMFYLAEYIALI 283 Query: 230 ----VVLQMFVGVFIPW--GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 + F+G F P G ++ +V K+ V + + R R+ Sbjct: 284 TNSALATTCFLGGFFPPCIGIAAVDNVLNMVPGVVWFFAKIYFMVWCYMMVRWTFVRPRV 343 Query: 284 DITPRITWA 292 D W Sbjct: 344 DQLMDFEWK 352 >UniRef50_Q47LF1 NADH-quinone oxidoreductase subunit H n=145 Tax=Bacteria RepID=NUOH_THEFY Length = 452 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 119/328 (36%), Gaps = 24/328 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ L + L ++ R R+ R GP G+LQ D +KL ++ Sbjct: 28 IILIKALAVFVFLMLCVLMMIMADRKVMGRMQQRHGPNRFGPWGLLQSLADGVKLSLKED 87 Query: 55 VGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLYLF 104 + P ++ P + + +PV + L + +L Sbjct: 88 LIPRTVDKVIYIAAPMIAAIPAFFAFSVIPVGPEVTMFGVETRLQLTDLPVAVLLVLATA 147 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G + SP+ +G R + + E + L AG+ + S I + Sbjct: 148 SLGVYGIVLAGWASRSPYPLLGGLRASAQVISYEIAMGLSFIAVFIYAGTLSTSGIVEAQ 207 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + + ++ L + E +LPFDL E E EL G ++EYS F + Sbjct: 208 QN--IWFAVILFPSFVIYLITMIGETNRLPFDLPEGEGELVGGFMTEYSSMKFTMFFLAE 265 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGL------LLALVIAIVKLVVGVLVIALFENSM 278 + + V M V +F+ + ++K V + + S+ Sbjct: 266 YVNMVTVSAMSVTLFLGGYLAPPPITTFWPGANEGWWPALWWLIKFVCVMFLFVWVRGSL 325 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSLLA 306 R+R D ++ W L +++ +A Sbjct: 326 PRVRYDQLMKLGWKILIPIQLVWITAVA 353 >UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 n=11 Tax=Bacteria RepID=Q07T25_RHOP5 Length = 319 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 158/292 (54%), Gaps = 4/292 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +L Q L++F +APLL+G R +ARL R+GP +LQ YRD+++LL +++V D + Sbjct: 7 DILVQGFQMLLVFMLAPLLTGFVRKVKARLTRRQGPSLLQPYRDLLRLLRKEAVLADNAS 66 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W+FR TPY+ + A +P G DLI ++ L ARFF A++G+D G+ Sbjct: 67 WLFRTTPYLTFAAIWVAAALVPTFATGLLFNWTADLIVIVALLGTARFFLALAGMDIGTA 126 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F IG+SRE M+ L EP +LL ++ A VAGST +S + + + + + L LA+ A Sbjct: 127 FGGIGSSREVMIAALAEPAMLLIVFGVALVAGSTQLSTVANFIASSQVGLRVSLGLAMIA 186 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E ++P D EL E + EYSG ++++G LK L+ + + + Sbjct: 187 LVMVALAENARIPVDNPSTHLELTMVHEAMILEYSGRHLAMIEFGAFLKLLLYVSLIGCL 246 Query: 239 FIPWGQ-METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 F PWG + ++ + ++K+ V ++ALFE + A++R+ P+ Sbjct: 247 FFPWGIAIAGDAPLSYVVGAGLYLLKVTVAGFLLALFETATAKMRVFRVPQF 298 >UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Gammaproteobacteria RepID=C8PVU9_9GAMM Length = 351 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 122/303 (40%), Gaps = 13/303 (4%) Query: 2 SVLYPLIQALVLFA----VAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S+++ +Q++V+F A L+ R A +R GP G LQ D++K+ Sbjct: 25 SIVFLAVQSIVIFLAVVIFAALMIPYERRMLALWQDRYGPNRVGWQGSLQVAADMLKIFF 84 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++ P A ++F L P + + L +PV ++ + +A + Sbjct: 85 KEDWTPKFADKFIFVLAPAISLFTALAAYIIVPVTPSLGGADWSIGILFFFAMAGLAVYA 144 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 G + + + +G R A + E L L L +AGS N+ +I + Sbjct: 145 VMFGGWASANKYALLGGLRSAAQTISYEVFLGLSLMGVVALAGSFNLRDIVYSQAGGFWH 204 Query: 171 QSIPL-VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 ++ +L A + PFD EAEQEL EG EYSG FG+ G + + Sbjct: 205 WNVFGQILGFLTFMVAGVAVTHRFPFDQPEAEQELAEGYHVEYSGMKFGMFFVGEYVNIV 264 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 +V + +F G + F + ++ ++K + + + L ++ R R D Sbjct: 265 LVSSLITILFFG-GWLPLFDGLSFIPPIIWFMLKTLFFMTMFVLARGALMRPRYDQVMNF 323 Query: 290 TWA 292 W Sbjct: 324 GWK 326 >UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=Bacteroidetes/Chlorobi group RepID=NUOH_PELLD Length = 372 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 79/327 (24%), Positives = 124/327 (37%), Gaps = 25/327 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGI--TRVARARLHNRRGP------GVLQEYRDIIKLLGR 52 + +L LV A+ L G+ R A + +R GP G+LQ DI+KLL + Sbjct: 36 LGLLVIAAIPLVFIALYALTYGVYGERKISAFMQDRLGPMEVGKWGILQTLADILKLLQK 95 Query: 53 QSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFF 111 + + P A ++F + P V+ LP L + + A+ Sbjct: 96 EDIVPTSADKFLFVIGPGVLFVGSFLAFAVLPFGPAFIGANLNVGLFYAIGIVALEVVGI 155 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT------DTVY 165 +G + + + GA R V E + L A +AG+ ++ I Sbjct: 156 LAAGWGSNNKWALYGAVRSVAQIVSYEIPAAIALLCGAMMAGTLDMQEINVLQSGPWGFA 215 Query: 166 HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGIS 225 H+ L QS L A+ E + PFD+ EAE EL G +EYSG F V+ Sbjct: 216 HFFLFQSPIAWLPFLIYFIASLAETNRAPFDIPEAESELVAGYFTEYSGMKFAVIFLAEY 275 Query: 226 LKQLVVLQMFVGVFIPWGQMETFTAG---------GLLLALVIAIVKLVVGVLVIALFEN 276 +V + VF+ G G + I+K + V Sbjct: 276 GSMFMVSAIIAIVFLGGWNSPLPNIGSLALNDLTTGPVWGAFWIIMKGFFFIFVQMWLRW 335 Query: 277 SMARLRLDITPRITWAGF-GFAFLAFV 302 ++ RLR+D + W FAF++FV Sbjct: 336 TLPRLRVDQLMYLCWKVLTPFAFVSFV 362 >UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=Bacteroidetes RepID=NUOH_BACFN Length = 358 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 117/308 (37%), Gaps = 16/308 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV- 55 V+ + + +A LL + R R GP G +Q D++K+L ++ + Sbjct: 30 VVIGVCIVALYAILAILLIYMERKVCGFFQCRLGPNRVGKWGSIQVLCDVLKMLTKEIIE 89 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + +++ L P++++ + LP+ L + LL +I ++G Sbjct: 90 LKHSDKFLYNLAPFMVIIASFLTFSCLPISKGLEVLDFNVGVFFLLAASSIGVVGILLAG 149 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ--SI 173 + + F+ IGA R + E + L + + G+ S I ++ + I Sbjct: 150 WGSNNKFSLIGAMRSGAQIISYELSVGLSILTMVVLMGTMQFSEIVESQANGWFIFKGHI 209 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++A A E + PFDL EAE EL G +EYSG FG L +V Sbjct: 210 PALIAFVIYLIAGNAECNRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNMFIVAA 269 Query: 234 MFVGVFIPW-------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + +F+ G + + K V ++ + + RLR+D Sbjct: 270 VAATIFLGGWMPLHIVGLDGFNAVMDYIPGFIWFFGKAFFVVFLLMWIKWTFPRLRIDQI 329 Query: 287 PRITWAGF 294 + W Sbjct: 330 LNLEWKYL 337 >UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rhodothermaceae RepID=NUOH_SALRD Length = 345 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 22/321 (6%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + L + + A LL R A + NR GP G+LQ + D++K + ++ V Sbjct: 8 TALGAFLVINAMLLSASLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDV 67 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P ++ ++ + P VMV + +T A+ +P +I LL L +I+ + ++ Sbjct: 68 QPAQSNKFIHSMAPVVMVVIAMTTASLIPFAEGVVVADLNVGVIMLLALTSISVYGVTLA 127 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL---SQ 171 G + S F+ +G R A V E + L + +AGS N I + Sbjct: 128 GWSSNSKFSLLGGLRSAAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWN 187 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 ++ + F E + PFDL EAE+EL G +EYSG FG+ + + Sbjct: 188 AVRNPIGCLIFIVTAFAETNRAPFDLPEAEEELVAGYHTEYSGMKFGMFFLAEYVNWFIA 247 Query: 232 LQMFVGVFIPWGQMET------------FTAGGLLLALVIAIVKLVVGVLVIALFENSMA 279 V +F + + LL V ++K+ V + Sbjct: 248 SFFIVTLFFGGYLVPLEPQLIALFPALEGSTLLALLQFVSLMLKVSFFSFVFIWVRWTFP 307 Query: 280 RLRLDITPRITWAGFGFAFLA 300 R + + ++ W LA Sbjct: 308 RFKYNQLMKVGWKYLLPIALA 328 >UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=Eukaryota RepID=Q6E7A5_SAPFE Length = 321 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 115/306 (37%), Gaps = 11/306 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L + L L + R + + R+GP G+LQ D +KL +++V Sbjct: 5 ILKTIALILPLLISVAYFTLAERKILSSIQRRKGPNVVGTFGLLQPLADGLKLFVKETVL 64 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +F P + + L +P S ++ LL + ++ + I+G Sbjct: 65 PSNCDVVLFIFAPILTFFLSLLSWVVIPFGKGMSYAELNIGILYLLAISSLGVYGIIIAG 124 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + V E + + S N+ +I + + +PL Sbjct: 125 WSSNSKYAFLGALRSSAQMVSYELTIGFSILSVIVCTQSLNLIDIV--LCQEKIWYCVPL 182 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 ++ E + PFDL EAE EL G EYS GF + G L++ + Sbjct: 183 FPIFIIFFISSLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLLMSSLN 242 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ G + +K+ V++ L + R R D R+ W F Sbjct: 243 TILFL--GGWLAPLYLNFIPGPFWFGLKVSFFVILFVLARAILPRYRYDQLMRLGWKVFL 300 Query: 296 FAFLAF 301 L + Sbjct: 301 PFTLGW 306 >UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH2_SYMTH Length = 394 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 117/332 (35%), Gaps = 47/332 (14%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD 58 L+ L+ F + +L R A + NR GP G +Q D+IKL ++ + P+ Sbjct: 24 LILVWGLINFYLCLML---ERKLSAWMQNRVGPWRVGLWGWIQPVADLIKLWVKEYIRPN 80 Query: 59 A-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 W++ + P++ + +P +I + + ++G Sbjct: 81 NVDKWLYLIAPFIGFVSANLVWLIVPFGDKLIATDFEIGIIFIAAVMGYDVIATFMAGWG 140 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIPL 175 + + ++ +GA R A + E +++ + +AGS +S+I P Sbjct: 141 SNNKYSMLGAMRGAAQLISYEVTMVMAVIGVVMMAGSLRLSDIVLAQQQRGFLGWFLFPQ 200 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 ++ A+ E+ + PFDLAEAEQEL G +EYSG + + + + Sbjct: 201 IIGFIVYLIASLAELNRAPFDLAEAEQELVAGHHTEYSGFRWAMFMLAEYIHLAAWSAIA 260 Query: 236 VGVFIPWGQMETFT-----------------------------------AGGLLLALVIA 260 +F+ T + + Sbjct: 261 ATLFLGGWSGPTLGQVAAGLGNVLNGFGAFTNPVGTAVLNWGLAISGSTILNWVAGVFWL 320 Query: 261 IVKLVVGVLVIALFENSMARLRLDITPRITWA 292 ++K V + ++ R+R+D + W Sbjct: 321 VLKTYFFVFLAMWIRWTLPRVRIDQLMDLGWK 352 >UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBX4_9ACTO Length = 442 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 125/327 (38%), Gaps = 23/327 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S++ + + L A L + R R+ R GP G+ Q + D KLL ++ Sbjct: 23 LSLIKAVFTIVFLIANVLLALWVERRGLGRMQTRPGPNVAGPLGLFQAFADAGKLLFKED 82 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVT------VGSPLPQLGDLITLLYLFAIA 107 + A +++ L P + ++ +P+ +PL + LY+ AIA Sbjct: 83 MWTRRAERFLYFLAPAIAAFAAFSVYAVIPMGPNVKIFGHSTPLQLADMPVASLYILAIA 142 Query: 108 R---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + + G T S GA R + + E + L L ++GS + S I Sbjct: 143 SLGLYGIVLGGWSTRSTLPLYGAVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQ 202 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + L A + E+ +LPFDL EAE E+ G ++EYS FG Sbjct: 203 GQ--FWWAFTLFPAFVIYCISAVGEVNRLPFDLPEAEGEIVAGHMTEYSSMKFGWYYLSE 260 Query: 225 SLKQLVVLQMFVGVFI-----PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMA 279 + L V + +F PW ++ +K+ ++++ ++ Sbjct: 261 YVNMLNVSAVATTMFFGGWHAPWPLSHVEFLNSGWWGMLWFFLKIWFFMVLMIWTRATLL 320 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLA 306 R R D + W L ++ L+A Sbjct: 321 RFRYDQFMNLGWKRLMPIALGWLVLVA 347 >UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR4_PELPD Length = 303 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 84/301 (27%), Positives = 153/301 (50%), Gaps = 6/301 (1%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ L+ +++ A+APL G+ R AR+ +R+GP + Q Y DI+KLLG+ + + Sbjct: 4 IVGVLVNVILVLALAPLFQGVLRKVTARIQSRQGPPINQPYLDILKLLGKDDIESGEAPV 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + R Y+ + VMLTIA +P+ +PL GD++ L+ L +A ++GL +GS + Sbjct: 64 LQRFAAYLPLAVMLTIACLVPM-GFKAPLSGSGDVLLLILLMTLAGICTLLAGLASGSTY 122 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IG +RE M + +EP+ + + + A GS N+ + + ++ L Sbjct: 123 SLIGINREMMCMITLEPLFAVAIVMGALAKGSFNLDEVLSGSVYGANGMALSGFAMLVIM 182 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A +G+ PFD++EAE E+ EG + EYSG + ++ K +V +FV +F+PW Sbjct: 183 LLAFQAFVGRAPFDISEAETEIMEGAMVEYSGPKLALFQYANMAKLVVYSALFVSLFVPW 242 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G + ++ ++ VK+ VL++ + AR R+D R + + Sbjct: 243 G-----SGLAAPISFILFWVKVFAMVLLVTTIAATHARYRIDQAIRYFAIMLAVSLVTLA 297 Query: 303 S 303 + Sbjct: 298 A 298 >UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH1_SYMTH Length = 328 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 120/304 (39%), Gaps = 16/304 (5%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFR 65 + + R A R GP GVLQ D+IK+L ++ + P+ A ++R Sbjct: 21 VTLAVAVFLLFMRKFLAYFAYRVGPVKVGPWGVLQPIADVIKMLFKEDIMPEQADPLIYR 80 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGD----LITLLYLFAIARFFFAISGLDTGSP 121 L P + L + +P GS + D ++ +L + A+ + A+ G + + Sbjct: 81 LAPVIAFFCALGVWVVIPWAPRGSWWSSMADPNAGVLVILAIAAMGVYGTALGGWASQNK 140 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + +G+ R + E + + L + GS ++ +I D + + P L Sbjct: 141 YGLLGSMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRN--MINLFPQFLGFLV 198 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A+ E G PFDL E+E EL G ++Y G FG+ + + F+ Sbjct: 199 FYIASLAEAGWTPFDLPESETELVAGYHTDYGGMRFGLFFLTELTHAVNSAVLSTTFFL- 257 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG-FGFAFLA 300 G + ++ V ++K+++ V V+ + + R R D W A L Sbjct: 258 -GGYNPWFGLTMIPGFVWFLLKVILMVFVLYWIKCTFPRFRYDRLMVFGWKVLLPVAALN 316 Query: 301 FVSL 304 V Sbjct: 317 LVGT 320 >UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM3_RHORT Length = 300 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +V + L++ APLL G+ R +AR+H+R+GP +LQ Y D+ KLL ++ + Sbjct: 3 NVGLAIFNVLLVVCAAPLLDGVLRQVKARIHSRQGPPILQTYFDLAKLLVKED-QRGVNQ 61 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F P V + ++ A +P+ + SPL GD I LY+ +A + G+ +GSP Sbjct: 62 LLFAWAPVVCMASVILSALFVPMAGL-SPLGFSGDAIVFLYVLTMAPLCMCLGGMASGSP 120 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + GA+RE M + VEP++ + L + A S N+++ + + ++ +++A A Sbjct: 121 YAYAGANREIMTLMAVEPVVAICLITSGIRAHSLNLADCVNAYAAG--APALSMIIATIA 178 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 E+ K+PFD AEAE E+ EGPL EYSG + KW KQ+V++ +FV F+P Sbjct: 179 FFLILPAELSKVPFDQAEAETEIMEGPLIEYSGRKLALFKWSFYAKQIVLITLFVEWFLP 238 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 W M + L ++ ++K+V+ ++I + R ++ + R +A F+ Sbjct: 239 WPHM-----NFVPLDILATLIKVVIVAVIIEVIAQIFPRFKIHQSIRYFYAVVAFSVGGL 293 Query: 302 V 302 V Sbjct: 294 V 294 >UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Chlorophyceae RepID=Q9MGK1_SCEOB Length = 324 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 14/310 (4%) Query: 3 VLYPLIQALV----LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR 52 +LY LI L L L+ + R + R+GP GVLQ + D +KLL + Sbjct: 2 ILYLLIMILATVVPLLLAVAFLTLVERRVMGAMQRRQGPNAWGLFGVLQPFLDGLKLLLK 61 Query: 53 QSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFF 111 + + P A +F P + ALP T G+ + +L + ++ + Sbjct: 62 EPILPSSADQPLFLWAPILTFLTSQIAWAALPTSTAGAVRDLNLGTMYVLAVGSLGVYGI 121 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ 171 + G + S + +G R + E + L + A +A S N S + ++ + Sbjct: 122 LLRGWRSNSKYAFLGCCRSVAQMISYELPMGLIVLCACMIANSLNWSALVESQQNG--IF 179 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 +PL E+ + PFDL EAE EL G EY+ GF + +++ Sbjct: 180 LLPLWPLALIWIICCLAELNRAPFDLPEAEAELVAGYNVEYASMGFALFFIREYRSMIMM 239 Query: 232 LQMFVGVFIPWGQME-TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + +F+ L +K V + ++ R + + Sbjct: 240 ATVTRLLFLGGTAAPMNLFFLNWLPGSFWLRLKATSVVFIYIWVRATLPRYKYSDLMDLG 299 Query: 291 WAGFGFAFLA 300 W LA Sbjct: 300 WKRLLPLTLA 309 >UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUU5_PELPD Length = 313 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 7/304 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGW 62 L L L + R AR+ NR+GP Q + D IKL ++ + P +A + Sbjct: 8 LLIFPGFLFLSLAGMVAEFCDRKLYARMQNRQGPPWFQPFADFIKLSSKEDIIPEEADPF 67 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL P V + + +P+ G+ L GDL+ ++YL I F ++G + S + Sbjct: 68 MFRLMPLVALAASVCAILYIPIWGRGALLSFEGDLVIVVYLLTIPTMTFFLAGWYSASLY 127 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IGA R + E L L L A +A S +++ + P + L+ Sbjct: 128 SMIGAVRSLTQLLAYEVPLYLALLAPACLADSWSLAGMAAYYGAHPWRWLLNLI-GFGVG 186 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 ++ K+PFD EAE E+ G +EYSG + + IS++ +V+ + VF+P+ Sbjct: 187 LVVMLGKLEKVPFDTPEAETEIVAGAFTEYSGRLLALFRMAISIEMIVLASLLAAVFLPF 246 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G G L ++ ++K+ + + + + AR R+D W A + + Sbjct: 247 G-----LGLGPLAGFLLYLLKIALIIAMTSFLRTIFARFRIDQMVDFCWRYVASAAMLQL 301 Query: 303 SLLA 306 ++ Sbjct: 302 VIVI 305 >UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n=3 Tax=Aquificales RepID=B2V8R5_SULSY Length = 311 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 155/305 (50%), Gaps = 4/305 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +++ L+Q ++L A++P + + L ++GP + Q Y+DI +L ++ V + Sbjct: 3 NIVIGLLQFVILVAISPFIKTFIHKIKCILRGQKGPPLTQAYKDIYRLFKKEVVISKDAS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ R+ PYV+ L AT LPV+ + L GD+I L Y+ A+ FF A+ G+D S Sbjct: 63 FISRMAPYVVFVSTLWAATFLPVINKYTLLNFTGDIIALAYILALGVFFIALYGMDQASA 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ-SIPLVLALC 180 F +G+SRE + L E +L ++ A GSTNI I + V+ + +S + + AL Sbjct: 123 FGGLGSSREITIAALSEASFMLIIFTFALQTGSTNIGEIFEKVHQFGISHVPVSVAFALI 182 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + + E ++PFD E EL E + E SG + + +K + L + Sbjct: 183 SLLIVSLAENARIPFDNPETHLELTMVHEAMILEASGRHLALFELSSYIKLTIFLTLASN 242 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F P G + + ++L +V+ I+K+++ + +AL E SMA+ R P I F + Sbjct: 243 LFFPLGFYKDTSILFIILGVVVYILKMLLFAVPVALIEMSMAKFRFFRVPEILTLAFILS 302 Query: 298 FLAFV 302 ++ + Sbjct: 303 LISLI 307 >UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular organisms RepID=A5UXK5_ROSS1 Length = 452 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 129/367 (35%), Gaps = 64/367 (17%) Query: 3 VLYPLIQALVLFAVAP---LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 + Y ++ +VLF L+ R AR+ +R GP G+LQ D +K+ ++ Sbjct: 21 IAYLIVTTIVLFYAVGNFILMVWAERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKE 80 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 + P +A WV L P V + + + +P P+ L+ ++ + A++ Sbjct: 81 DIVPRNADRWVHLLAPVVSLAPVAMMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLM 140 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 ++G + + F +GA R V E + L +AG ++ N+ P+ + Sbjct: 141 MAGWGSNNKFALLGAMRAVAQLVSYEIPAVTALLTVVVLAGGMSLLNLPHLQAGVPIMGA 200 Query: 173 IPL------------------------------------------VLALCACAFATFIEM 190 L +L A E Sbjct: 201 TILCNDPAGCSPLLYTTITSFPGSPNEPVQALDLGLGWWVFTPVGLLGFVVFFIAALAEG 260 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFD+ EA+ E+ G ++EYSG F + + + F+ Q A Sbjct: 261 ERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQYILNFALAALAATAFLGGWQGPGVAA 320 Query: 251 G----------GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 L+ + K+ + V+ + RLR+D W LA Sbjct: 321 LANMGGPWVHAAAALSAFYLLAKIWILFFVMIWLRGAFPRLRVDQLMDFAWK--LLLPLA 378 Query: 301 FVSLLAA 307 V++++A Sbjct: 379 LVNIVSA 385 >UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=cellular organisms RepID=NUOH_XYLF2 Length = 363 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 120/324 (37%), Gaps = 19/324 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----GVLQEYRDIIKLLGRQSVG 56 +VL L+ A+ L R +H R GP G+ Q + D+ KLL ++ + Sbjct: 28 TVLKILMIAIPLIVSVAFYVVWERKLIGWMHVRHGPMYVGMGLFQAFADVFKLLFKEVLY 87 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F + P + + +P T L+ LL + ++ + ++G Sbjct: 88 PSKAHKAIFVIAPLLTLAPSFAAWAVVPFDTKLVLSNANVGLLYLLAMTSLGVYGIILAG 147 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---YHWPLSQS 172 + S + +GA R A V E + L AGS N+S I + Sbjct: 148 WASNSKYAFLGAMRSAAQVVSYEIAMGFALVGVMIAAGSLNLSQIVMAQAGSSGFFDWFL 207 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 IPL + E + PFD+ E E E+ G + EYSGS F + ++V Sbjct: 208 IPLFPLFIVYWVSGVAETNRSPFDVVEGESEIVAGHMVEYSGSVFALFFLAEYANMILVS 267 Query: 233 QMFVGVFIPW----------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 + F+ GQ+ ++K++ F S R R Sbjct: 268 FLISIFFLGGWLSPIQGWVSGQVSPLIDWVWNGGWPWLLLKVLFFASAYIWFRASFPRYR 327 Query: 283 LDITPRITWAGFGFAFLAFVSLLA 306 D R+ W F + ++++ A Sbjct: 328 YDQIMRLGWKVFIPLTIVWIAVTA 351 >UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B2KDT5_ELUMP Length = 322 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 8/289 (2%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV--FRL 66 L L + R A++ NR+GP Q D IKLL ++ V P V F++ Sbjct: 19 GLLFLASYGLFCEWFDRKLYAQMQNRQGPHWYQPVADFIKLLSKEVVVPSNVTMVKMFKV 78 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P+V + ++T A +P +V S + G+LI LYL I F + G + SP++AIG Sbjct: 79 LPFVAISAIVTTALMVPFHSVESVINFQGNLIAALYLLTIPTITFFLVGWTSQSPYSAIG 138 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 + R E L+ + A +AGS NI++I PL + ++ L A Sbjct: 139 SMRVLTQLFAYEIPLMTAMLSPAILAGSWNIADIALFFSANPLLMFV-NIIGLFVSLIAL 197 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME 246 ++ ++PFD+ AE E+ G +EYSG +G ++ I ++ +VV + VF + Sbjct: 198 QGKLERVPFDIPHAETEIVGGVFTEYSGRLYGFIQLAIDMEMVVVAALMNSVF-----LG 252 Query: 247 TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 G + V+ IVK + V V++L ++ MAR+R++ W Sbjct: 253 GSLGLGGIAGFVLFIVKTLAIVFVLSLIKSLMARVRIEQMINFCWKYLA 301 >UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA8_CAMFF Length = 306 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 175/307 (57%), Gaps = 13/307 (4%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +VL ++Q V A+ PL GI R R ++ +R+G +LQ Y DI KLL R P+ Sbjct: 3 AVLLMILQLFVALALTPLFDGIARNLRGKIQSRKGSPILQTYYDIFKLLKRSRTAPNCVH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQ-LGDLITLLYLFAIARFFFAISGLDTGS 120 W F+ +PY++ V + +P+ GS + D+I ++YL A+ RF F ++ LD+ + Sbjct: 63 WFFKFSPYMLFSVCAMLVMMIPITYGGSANAGAVSDIIVVVYLVALFRFIFGVASLDSAN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS-IPLVLAL 179 P+ A+GASRE+++ + +EP++++ L V A +A +TN++ I + + + + S +A Sbjct: 123 PYAAVGASRESLIAIYIEPIMIICLVVIAMLAKTTNLAIIKELIQNAEIGYSSASYAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A +A ++E G+ PFDLAEAEQE+QEG + EYSG +++ + LKQ ++ F+ +F Sbjct: 183 VAFLWAMYVETGRKPFDLAEAEQEVQEGVIGEYSGKDLALVEMALMLKQFAMISFFIVMF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +P G F L L++ ++ + + + L +N R R+ I+ F A + Sbjct: 243 VPIGFSSPF------LTLIVHLILVGLFYVGAILIDNFGPRFRI-----ISSLKFNSACI 291 Query: 300 AFVSLLA 306 F+SL++ Sbjct: 292 LFISLIS 298 >UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=Bacteria RepID=NUOH_DEHSC Length = 353 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 16/297 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++Y +I + + + R R R GP G+LQ D IK+L ++ + Sbjct: 9 LVYLVILFGFVIVSVLIFIWLERRLIGRFQLRPGPNRAGPFGLLQPIADAIKVLIKEDII 68 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +A VF L P V ++ + A+P + ++ +L + ++ ++G Sbjct: 69 PSEADKGVFWLAPLVAFVPVMLMFAAIPFADGVMLVDLNIGILYILAVSSVTVIGIFMAG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ +GA R V E L+L + + GS +++ I + + Sbjct: 129 WSSNNKYSLLGAMRTIAQEVSYEIPLVLSILGVVMLTGSLSMNEIVKAQ---DVPFILLQ 185 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L A E+ + PFDL EAE E+ G +EYSG FG+ + L V + Sbjct: 186 PLGFFVYLSAAMAEVNRTPFDLLEAESEIIAGFHTEYSGMKFGLFYLMEYAEVLAVSAIA 245 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +F+ Q G LL + I K+++ + I ++ RLR+D W Sbjct: 246 TTLFLGGWQ------GPLLHPVFWFIAKILLVFMFIIWVRATLPRLRIDQVMAFGWK 296 >UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 RepID=A6FCP5_9GAMM Length = 328 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 109/290 (37%), Gaps = 22/290 (7%) Query: 21 SGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVG 73 + + R + R GP G+LQ D IKLL ++ P A +F++ P V + Sbjct: 29 TWLERKIAGHIQQRPGPMRVGWHGLLQPVADGIKLLTKEDHIPSAADRTLFKMAPVVALV 88 Query: 74 VMLTIATALP------VVTVGSPLPQLGDLITLLYLFAIARFFF---AISGLDTGSPFTA 124 + A+P + L + LL++ A++ ++G + S + Sbjct: 89 PPFVVFVAIPLGEPVTIFGTEVMLSLSNMNVGLLFILAVSGIGIFGTILAGWASNSKYAV 148 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R + E + + +A S N+ +I P L Sbjct: 149 LGSLRAIAQMISYEIPMGFSVIGVVMLANSMNMMDIVTAQKDMWNVVYQP--LGFFVFFV 206 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A E+ ++PFDL EAE +L G +EYSG F L +++ + V +F Sbjct: 207 AGLAEVQRIPFDLPEAEGDLGAGYHTEYSGIRFSFFMLSEYLGVVIIGFLNVMLFFGGWH 266 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 A + V ++K+ + V F + R R D I W Sbjct: 267 ----GAPPFIPDTVWLLLKVGFFIWVFMWFRFTFPRYRYDQLMAIGWKVL 312 >UniRef50_C1ZFV5 NADH dehydrogenase subunit H n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV5_PLALI Length = 390 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 25/320 (7%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFR 65 L L + R A + +R GP G+LQ D K L ++ V P + ++ Sbjct: 20 LMGTIAYLILVERRLAAFIQDRYGPNRVGWAGLLQPIADGAKFLLKEDVIPGYVNKTLYI 79 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLIT---------LLYLFAIARFFFAISGL 116 L P + V + +P V + +I + + ++ + + G Sbjct: 80 LGPSIAVFTAMAGFAIVPFGPVDQAPSWMRFVIAPDVNIGMIYIFCVGSLGVYGVILGGW 139 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIP 174 + + ++++G+ R + V E L + + + S ++++I + + Sbjct: 140 ASNNKYSSLGSMRASAQVVSYEIPLGMSIIGVVLMTSSLSLNDILMHQANQGVLGWNVWT 199 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 LAL + E +LPFDL+E EQEL G +EYS F + G + V + Sbjct: 200 QPLALLIFFVSALAETNRLPFDLSECEQELVGGFHTEYSSMKFALYFLGEYAHIITVCFL 259 Query: 235 FVGVFIPWGQMETFT------AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +F Q G L+ +V+ + K+++ +L+I ++ R R D Sbjct: 260 TAILFFGGWQFPLIAEADSAYLGATLVKVVVLLTKVLMIILLIMFIRWTIPRFRFDQLMN 319 Query: 289 ITWAGF-GFAFLAFVSLLAA 307 + W G A + + ++ A Sbjct: 320 LAWLGLIPMAAMNILVVMTA 339 >UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Tax=Metazoa RepID=NU1M_HUMAN Length = 318 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 21/294 (7%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVM 71 L R + R+GP G+LQ + D +KL ++ + P S ++ P + Sbjct: 19 FLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTITLYITAPTLA 78 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTAIGAS 128 + + L + T LP+ P P + + LL++ A +A + SG + S + IGA Sbjct: 79 LTIALLLWTPLPM-----PNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGAL 133 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 R + E L + L ++GS N+S + T H L +P +T Sbjct: 134 RAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEH--LWLLLPSWPLAMMWFISTLA 191 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF 248 E + PFDLAE E EL G EY+ F + +++ + +F+ T+ Sbjct: 192 ETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIFLG----TTY 247 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 A L + K ++ + + R R D + W F LA + Sbjct: 248 DALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALL 301 >UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax=cellular organisms RepID=NUOH2_ACIBL Length = 354 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 125/324 (38%), Gaps = 33/324 (10%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ VL + R R+ NR GP G+LQ D +K + ++ + Sbjct: 11 ALIKVVLVIFVLLTAVAYTVWLERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDL 70 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTV-------------------GSPLPQLG 95 P + ++ L P + V + L + +P G P+ Sbjct: 71 LPPHVNKPLYILAPMLAVAMALLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINI 130 Query: 96 DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGST 155 L+ +L + +I + A++G + S ++ +G+ R + V E L L L ++GS Sbjct: 131 GLLIILGVTSIGVYGIALAGWSSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSF 190 Query: 156 NISNITDTVYHWPLSQSIPLVLALCACAF---ATFIEMGKLPFDLAEAEQELQEGPLSEY 212 ++ I + +I A + + E ++PFDL EAE EL G +EY Sbjct: 191 SLREIVRLQQGGFWNWNIFGGFQFIAFFIYLTSAYAETNRIPFDLPEAETELVAGYHTEY 250 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPW--GQMETFTAGGL--LLALVIAIVKLVVGV 268 S F + + V + +F+ G + F L L+ + +++ + Sbjct: 251 SSMKFAMFFMAEYANMVTVACIASILFLGGWSGPVPGFLPPILQSLVPVFWFCLRIFAFL 310 Query: 269 LVIALFENSMARLRLDITPRITWA 292 + ++ R R D +W Sbjct: 311 FIYIWVRGTLPRFRYDQLMAFSWK 334 >UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B458_SULD5 Length = 308 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 9/292 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M Y L+Q L+ VAPL G++R RA+ +R GP + Q Y DI KLL R + Sbjct: 1 MDFFYLLMQLLLAIIVAPLFDGMSRKLRAKFQSRIGPNIFQTYYDIYKLLKRGRTQSHSV 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVT---VGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ R+ PY+M + LP+ S L D+ LLYL A+ RF F ++G+D Sbjct: 61 SYISRIAPYMMFISAAAMFCVLPITYGRDATSSLMPFSDIFILLYLAALFRFTFIVAGID 120 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LV 176 + +PF+ + ASRE +G E + ++ L V AGSTN+++I + + +IP Sbjct: 121 SANPFSGVSASREGTMGFYTEEVAVICLIVVMMGAGSTNLASIVNMIQSGVYGYNIPSFS 180 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 +A A + ++E G+ P+DLAEAEQELQEG L E+ G F ++ I LKQ+ VL F+ Sbjct: 181 IAATAFLWVMYVETGRKPYDLAEAEQELQEGVLGEFCGKDFAIIDMAILLKQMSVLGFFI 240 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +F+PWG +L+L+I + ++ ++ +N R ++ + Sbjct: 241 VIFMPWG-----LVNHPILSLLIFLAQVGFLYIMGVFIDNFGPRFTINKGVK 287 >UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=Fungi/Metazoa group RepID=NU1M_USTMA Length = 331 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 123/315 (39%), Gaps = 13/315 (4%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPG------VLQEYRDIIKLLGRQSV 55 ++L L+ + + ++ I R + R GP +LQ + D +KL+ ++ V Sbjct: 7 NLLEILVVLVPILLSVAFMTVIERKVMGSMQRRIGPNVVGYYALLQPFADALKLVIKEQV 66 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A+ +F L P V + L +P+ + ++ L L +I + + Sbjct: 67 IPSQATKSLFFLAPMVTLIFSLLGWGVIPLGPGLALSDFSLGILYSLALSSIGVYGILFA 126 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G S + +G+ R + E + + + G+ NI+ I ++ + +P Sbjct: 127 GWSANSKYAFLGSLRSTAQMISYELIYSAAVLAVILLCGTFNITEIIESQQS--VWYIMP 184 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L+ + E + PFDL EAE EL G ++E+SG F +++ Sbjct: 185 LLPIFILFFVSALAETNRTPFDLPEAESELVAGFMTEHSGMIFVFFFLAEYGSIVLMSTF 244 Query: 235 FVGVFIPWGQMETFTAG----GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 +F+ M + L + VK V+ + + ++ R+R D Sbjct: 245 TAILFLGGYNMSPQVLFAEDSFINLQSIALAVKAVLIMFLFVWIRATLPRMRYDSLMTFC 304 Query: 291 WAGFGFAFLAFVSLL 305 W G +A + L+ Sbjct: 305 WTGMLPVAIALLILV 319 >UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B9XHI2_9BACT Length = 381 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 119/340 (35%), Gaps = 41/340 (12%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP---------------------GVL 40 S + I V+ + + R A + +R GP G+ Sbjct: 24 SFVKIAILVGVVLTMVAYAVLVERKVSAFIQDRVGPNRAAPPFIAAIPVLGPFLVRLGIF 83 Query: 41 QEYRDIIKLLGRQSVGPDASGWV-FRLTPYVMVGVMLTIATALPVVT--VGSPLPQLGDL 97 Q D +K L ++ P + F L P + + L +P + G + Sbjct: 84 QPLADGLKFLLKEDFTPAHVRKIYFWLAPMIAMVPALLTFAVIPFGSNLGGQRMVIADLN 143 Query: 98 ITLLY---LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGS 154 + +LY + ++ + ++G S + +G R + + E + + + + G+ Sbjct: 144 VGILYTFGIVSLGVYGIVLAGYAANSKYPFLGGIRSSAQLISYEIAMGMSVIPVFMLVGN 203 Query: 155 TNISNITDTVYHW-------PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 N+S + P L+ A F E +LPFDL EAE EL G Sbjct: 204 LNLSGVIHYQTGGLFGISWLPNWLLFKQPLSFIIFIIAAFAETNRLPFDLPEAETELVAG 263 Query: 208 PLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA-------GGLLLALVIA 260 +EYS F + G + M V +F+ + F G LL + I Sbjct: 264 YHTEYSSMKFALFFLGEYANMIASSAMMVTLFLGGWTLPWFGLDQPADSIGIGLLHIGIF 323 Query: 261 IVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 I K+++ +L+ R R D + W F LA Sbjct: 324 IGKIILLMLIFIWIRWMFPRFRYDQLMDLGWRRFIPLALA 363 >UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=Verrucomicrobia RepID=B3DXP1_METI4 Length = 375 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 130/343 (37%), Gaps = 50/343 (14%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------------GVLQEYRDIIK 48 +++ ++ +L V R A + +R GP G+ Q D K Sbjct: 12 TLVKIILVVGILLGVVAYTVLAERKICAAIQDRVGPNRVGLPFLKSRLWGLGQPIADAFK 71 Query: 49 LLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALPVVTV---------------GSPLP 92 L+ ++ P + + L P+ ++ L I +P ++ G + Sbjct: 72 LMLKEQFVPRVVKKFYYSLAPFFVIVPPLIIIGFIPFASIDPVTLSSLKIIIPQPGVIIN 131 Query: 93 QLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA 152 ++ + +++ + ++G + S + +G R + E L + + Sbjct: 132 SGTGVLWAFAISSLSVYGIVLAGWSSNSKYAFLGGIRSTAQMISYEVALGFSIIPVFLLT 191 Query: 153 GSTNISNITDTV--YHWPLSQSI-------------PLVLALCACAFATFIEMGKLPFDL 197 GS N S I + W L + L L+ A F E + PFDL Sbjct: 192 GSLNFSEIVQYQIEHGWLLFPFLGKHPDFRLFVFWPFLFLSFLIFMVALFAETNRAPFDL 251 Query: 198 AEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF-----IPWGQM-ETFTAG 251 E+EQEL G +EY G FG+ G + + + +F +P+G + E + G Sbjct: 252 PESEQELVAGYNTEYGGMKFGMFFLGEYAAMIAASSLIITLFLGGWSLPFGWLSEGKSLG 311 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +LL ++ ++K+++ + + ++ R R D + W F Sbjct: 312 VILLQALVFLLKILIFLFLFIWVRWTLPRFRYDQLMNLGWKIF 354 >UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=cellular organisms RepID=NUOH_SILST Length = 345 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 111/315 (35%), Gaps = 14/315 (4%) Query: 3 VLYPLIQALVLFAVAPLLSGI-TRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +L + + ++ L R A + RRGP G+LQ D +K + ++ V Sbjct: 15 ILAQTLAVVAFVMISLLFLVYGDRKIWAAVQMRRGPNVVGVYGLLQTVADALKYVVKEVV 74 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + VF L P + + +P ++ + + ++ + + Sbjct: 75 IPAGSDRTVFILAPLTSFVLAMIAWAVIPFNDTWVLSDINVAILYVFAVSSLEVYGVIMG 134 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---YHWPLSQ 171 G + S + +G+ R A + E + L + GS N +I Sbjct: 135 GWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFGDIVRAQDGDAGLFNWY 194 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 +P + + E + PFDL EAE EL G EYS + F + G + ++ Sbjct: 195 WLPHFPMVFLFFISCLAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIFLM 254 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + +F L + K+ + A+ + R R D R+ W Sbjct: 255 CALTSLLFFGGWLSPVPFLPDSPL---WMVAKMAFFFFLFAMVKAITPRYRYDQLMRLGW 311 Query: 292 AGFGFAFLAFVSLLA 306 F L +V +A Sbjct: 312 KVFLPFSLIWVVFVA 326 >UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteobacteria RepID=Q2WAW1_MAGSA Length = 315 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 155/292 (53%), Gaps = 4/292 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L+ L+Q +++ A++PL++G R+ ++RL+ R G Q YRDI +LL +++V ++ Sbjct: 3 AILWQLLQIVLVVAISPLITGWVRLVKSRLNGRIGASPFQPYRDIYRLLQKEAVVAHSAS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVFR+ PYV G A +P T L Q DLI L+ L +ARF+ A++G+D G+ Sbjct: 63 WVFRVAPYVTFGAAWLAACIVPAFTTNLFLAQAADLIALVALLGVARFWTALAGMDVGTS 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F +GASRE M+ L EP +L+ + + ++G+T + I V + + L LAL A Sbjct: 123 FGGLGASREMMISSLAEPAMLMVTFSLSLISGTTAPAQIIAFVLSGGVGIEVSLGLALAA 182 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E G++P D EL E + EYSG +M+ ++ + + + G+ Sbjct: 183 LVMVAIAENGRIPIDNPATHLELTMVHEAMVLEYSGRHLALMEGAGMVRLTLFMALIGGL 242 Query: 239 FIPWGQMETFT-AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 F PWG + A +L+ L + K V + +FE S+A++R+ Sbjct: 243 FAPWGMAQPGGDAVAVLVGLAAFLAKCFVLATALGVFETSIAKMRVFRYADF 294 >UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteobacteria RepID=A6DB52_9PROT Length = 308 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 110/285 (38%), Positives = 162/285 (56%), Gaps = 9/285 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPG-VLQEYRDIIKLLGRQSVGPDAS 60 ++ + ++Q L + AVAP G+ R+ RA++ R+GP Q YRD+ KL R V P + Sbjct: 4 TLFWMVVQVLAVVAVAPFFDGVARMIRAKMQARKGPPDPFQTYRDLYKLFKRGRVYPKNA 63 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQL-GDLITLLYLFAIARFFFAISGLDTG 119 WVF+ PY+M GV+ T+ ALP+ + DL +LYL A RF F ++ D+G Sbjct: 64 HWVFKYAPYIMFGVVATMLAALPITYATDFKAGVVSDLFVILYLGAFFRFIFGVASNDSG 123 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLA 178 + F AIG SRE M+GV VEP+++L L V +A ++N+ I V HW + P +A Sbjct: 124 NAFAAIGGSREQMIGVFVEPVIVLCLIVVMLLAKTSNLVEIQYMVKHWQIGYIYPSFAIA 183 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 A +A ++EM + P+DLAEAEQELQEG L EYSGS + + +KQ V++ +F+ + Sbjct: 184 SIAFLWAIYVEMARNPYDLAEAEQELQEGVLGEYSGSDLAISHMTMLIKQFVMIGLFLSI 243 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 F PW LLAL+I I+K V + +N R +L Sbjct: 244 FEPW------NVEFPLLALLIYIIKAGVFYVGAVFIDNFGPRYKL 282 >UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN6_HALUD Length = 328 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 4/308 (1%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASG 61 L LF A + R ARL NR GP LQ D +KLL ++S P +A+ Sbjct: 13 YLLVFPGFAFLFTYALAAEYVDRKLYARLQNRVGPPPLQPLADFLKLLAKESAVPENATE 72 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++R P + +LT +PV + + + GDL+ +L+L ++ F G +G+ Sbjct: 73 RIYRAAPLTGLAGVLTAMLYIPVWSEAAAMSFEGDLVVVLFLLSLPSFSLFFGGWYSGNV 132 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F+ +G +R E L + A AG+ +S+I V P + + A Sbjct: 133 FSQVGTTRTITQLFGYEIPFFLACFAPAVAAGTLELSSIVAFVGSNP-AYVVVFAPAFVI 191 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI- 240 + ++ ++PFD EAE EL G L+EYSG + + ++ +V + +F+ Sbjct: 192 GLLSLQAKLERIPFDAPEAESELATGALAEYSGRKLALFRLTKDVELVVGAALLSALFLG 251 Query: 241 -PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 P+ GG +L + + +VK + V V+++ + +ARLR++ + + L Sbjct: 252 GPYPVGAIEGIGGAVLGIAVFLVKTLAIVAVLSVLKGVLARLRIEQVVDVFYRWLVPIGL 311 Query: 300 AFVSLLAA 307 + L+ A Sbjct: 312 VQIGLVLA 319 >UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax=Bacteria RepID=NUOH2_RHOPB Length = 324 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 117/299 (39%), Gaps = 10/299 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ + + +VL VA + + R + R GP G LQ D +K+L ++ Sbjct: 6 LTAIISTMLIMVLLVVAGTFTWVERRVLGFVQERLGPNRVGPFGFLQWVADTVKILTKED 65 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P A + L P V +L + + ++ LL + + + + Sbjct: 66 RPPPGADRVAYILAPMVAATPVLAGFGVVAFGDGLALANIDVGVMFLLGMMGLTVYGVVL 125 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 L + S F +G R A + E L L L +AGS +++ I Sbjct: 126 GALASHSRFALMGGLRAAAQMLGYEAFLGLSLLGVVMIAGSLSLTEIVHAQRDVWFVLLQ 185 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P AL A +LPFDL E+E +L G L+EY+G FG+ G L L+V Sbjct: 186 PFGAAL--FCIAGVAAAHRLPFDLPESENDLVAGYLTEYTGMSFGLFFLGEYLAVLLVAS 243 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + V +F G + G L + +K+ V L+ ++ R R D R W Sbjct: 244 LAVTLFFG-GWLGPVWLGPYLPGPIWFGLKVGVIALIFIWIRATLPRPRYDQLVRFAWK 301 >UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=Rhizobiaceae RepID=NUOH2_RHIEC Length = 340 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 108/290 (37%), Gaps = 22/290 (7%) Query: 21 SGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVG 73 + + R + R GP G+LQ D IKLL ++ P +A ++F+L P + + Sbjct: 36 TWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILALA 95 Query: 74 VMLTIATALPVV------TVGSPLPQLGDLITLLYLFA---IARFFFAISGLDTGSPFTA 124 + A+P L + LL++FA I F G S + Sbjct: 96 PPFVVFVAIPFGETISVRGTEITLYLSNMNVALLFVFAVIGIEVFGVIFGGWAANSKYAV 155 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R + E + + +A S ++ +I P + Sbjct: 156 LGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQTDVWNIVYQP--VGFFVFFV 213 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A E ++PFDLAEAE +L G +EYSG F + L+V + V +F Sbjct: 214 AGLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFAFFMVSEYVIVLLVSVLLVILFFGGWN 273 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + L+ ++K+ V + F + R R D I W Sbjct: 274 ----GILVPMPPLLWFLLKVAFFVYLFIWFRFTFPRYRYDQLMAIGWKVL 319 >UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL7_THEPD Length = 312 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSV-GPDA 59 + +L ++Q + L +APL GI R ARL R+GP V+Q YRD++KL + + P+ Sbjct: 4 LQILVGVVQGVCLVLLAPLAYGIQRKIIARLQLRKGPPVIQPYRDLLKLWSKDKLSVPEV 63 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S W++ TP + + + + IA ++PV + L D+ L+Y A+ARF +I+ LDTG Sbjct: 64 SSWIYMATPLLYLAITVVIAMSIPVFV--NMGIPLADIFLLIYSLALARFVLSIASLDTG 121 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-DTVYHWPLSQSIP-LVL 177 SP A GA RE V++E +L + A GS+++ + T W + P ++ Sbjct: 122 SPLAAAGAWRENAAAVVIEVPMLFAALLPALEGGSSSLYAVVSHTCLRWETFIARPSYIV 181 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A A E G LPFD+AEAEQE+QEG L EYSG +M+ + +K+ V+ +FV Sbjct: 182 AALAFFVCMLAEAGVLPFDVAEAEQEIQEGLLQEYSGRQLALMQLSMMVKRAVLFTLFVD 241 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F+P+G T G+L+ + ++KL+ V + AL AR ++ + F Sbjct: 242 IFLPYGVALTLEPLGILVGVASYLIKLLALVTIAALVIAGNARYKVVELHKNLSLVFVLV 301 Query: 298 FLAFV 302 A + Sbjct: 302 VCATI 306 >UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 n=3 Tax=Thermococcus RepID=B6YWP7_THEON Length = 293 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 17/303 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DA 59 M+ +Y + + + APLL GI R +ARL +R+GP ++Q + D++KL R +V P ++ Sbjct: 1 MNAVYAALNLIFIVLFAPLLDGIERKVKARLQSRQGPPLIQTWLDLLKLFRRPNVRPRES 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 W+F P + + +L + +P + GS L GD+I +YL ++ A+ TG Sbjct: 61 VRWLFEPAPAIALVSVLAASLFIPSLLPGS-LDTWGDIIAFIYLSTLSAVAIALGAFSTG 119 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 SP+ IG+ RE + + E L + A +G + S + +PL + + Sbjct: 120 SPYAQIGSHREVSIIMAEEFSLAFIVAALAASSGGLSFSRL------FPLQLKVSTITGA 173 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A A ++ ++PFD+AEAE E+ EGP E+SG G G++K I +K+L++ + + F Sbjct: 174 LAFAVMAYVAGARIPFDVAEAEPEIVEGPFIEFSGKGLGMLKLSIYVKRLLLTTILLNFF 233 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +P + +++ ++ LV+ +V A E R R R L Sbjct: 234 LP---------QDGTVRVLVYVIGLVIISVVYASIEAHYGRFRTKDAARFLKRFAIVGIL 284 Query: 300 AFV 302 +++ Sbjct: 285 SWI 287 >UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5G3_9PLAN Length = 409 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 39/325 (12%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGP-------------GVLQEYRDIIKLLGRQS 54 I L A + R A + +R GP G+ Q D +K + ++ Sbjct: 10 IMIGGLMTAAAYFVLLERRMAAWVQDRIGPNRVGIPLTKIRLFGLGQPLADGVKFIFKEE 69 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLP--------------QLGDLIT 99 P ++ L P ++ L +P ++ P G I Sbjct: 70 YTPAHVDKRLYILAPISILAAALAAFAVIPFGSMLPPFAIGPVEVKDKIDLVVAPGADIG 129 Query: 100 LLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN 156 ++Y+FA++ + + G + + ++ +G R + + E + LG+ AGS N Sbjct: 130 MIYVFALSSIAVYGVILGGWSSNNKYSFLGGLRSSAQLIAYELPMGLGILGVVLCAGSLN 189 Query: 157 ISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSG 216 + + + + + L L A F E +LPFDL E EQEL G +EY+G Sbjct: 190 LEELITSQARTGVWYAFAQPLGLIVFVIAAFAEAARLPFDLPECEQELIGGYHTEYAGLK 249 Query: 217 FGVMKWGISLKQ----LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAI----VKLVVGV 268 + L +++ +F G + WG L + I K+ + + Sbjct: 250 LLLFLVAEFLHMITASFLIVMLFFGGWHFWGITGPADGDITWLHAIARIGVLNAKIFLVI 309 Query: 269 LVIALFENSMARLRLDITPRITWAG 293 L L S R R D + W Sbjct: 310 LFFMLVRWSWPRFRFDQLMSLAWKV 334 >UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Hexactinosida RepID=B2BRP7_9METZ Length = 316 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 113/283 (39%), Gaps = 15/283 (5%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDASGWVFRLTPYVM 71 L+ I R A R+GP G+LQ D IKL+ ++++ + +F L+P + Sbjct: 20 YLTLIERKILASRQIRKGPNIVGIYGLLQPIADAIKLIIKETIKHHKTTKTLFLLSPALA 79 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + + LT + +P+ +I +L L ++ + +SG S + +G+ R Sbjct: 80 IIIALTAWSIIPLDYKHPQRNPKLGIIIILALSSLRIYTILLSGWARNSKYALLGSIRAT 139 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E + + + ++ N+ I + + +PL E Sbjct: 140 AQMIRYEVCIGIIILTIVSLSRRLNLRQI--RMCQQKIWYILPLFPIFIMFTIRRIAETN 197 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFDL E E EL G EYS F ++ + L++ ++ +F+ + + Sbjct: 198 RTPFDLTERESELVSGFNVEYSAILFTLLFLAEYINILLMARIIRILFLRGRTFLSVSNP 257 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +L +K++ + + AR+R D + W + Sbjct: 258 RILA------IKIIRISYLFICIRATFARIRYDQLMNLLWKRY 294 >UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) n=2 Tax=Leptospirillum sp. Group II RepID=A3ETD7_9BACT Length = 320 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 3/303 (0%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L + +++ +APL +G + +A L NR PG+ Q RD KLL ++++ P+ S +FR Sbjct: 15 LFRMILVLVLAPLFTGWIGMVKALLQNRTPPGLFQPLRDWSKLLSKETIVPEGSSALFRW 74 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 TP + ++L + +PV+ G +GD + L + A R A+ DTG+PF +G Sbjct: 75 TPPAVFSLLLVSSLLVPVLATGGKPIVIGDALVLTGIMAFVRVLMALGAFDTGTPFGHLG 134 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 RE M+G L EP +L ++ + +GST D + L + LV A Sbjct: 135 GRREMMVGFLAEPATILVIFTTSLFSGSTMTYQTADALRSGSLLPTPSLVFGALAFLLIL 194 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E ++P D EL E L EY+G +M+WG ++K +V + + +G+F PWG Sbjct: 195 LGENARIPIDNPATHLELTMIHEAMLLEYAGPPLALMEWGSAIKLVVYVLLGIGLFFPWG 254 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 T L A V ++KL+ LV+ + E MA+LR+ P F A L F+S Sbjct: 255 LSGTEGPEALASAGVFLLLKLLAAGLVLGILEALMAKLRIFRVPEFMTLAFLLAILGFLS 314 Query: 304 LLA 306 Sbjct: 315 HFV 317 >UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Bacteria RepID=Q2RUH3_RHORT Length = 323 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 21/319 (6%) Query: 1 MSVLYPLI---QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 +SVL+ + + + L G R ARL R G +LQ + D++KL+ ++++ P Sbjct: 9 LSVLFAAVVFPGGIFAITLGLALKGFDRRVFARLQRRVGAPLLQPFYDVLKLMTKRTLVP 68 Query: 58 DASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + + V F + P + + M A +P+ + P P GDL+ L YL ++ ++G Sbjct: 69 ENANLVVFLMVPLLGLASMGVAAAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGS 128 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGS-------TNISNITDTVYHWPL 169 +GSPF IG SRE + + E +LL + A G+ ++S I Sbjct: 129 ASGSPFGGIGFSREMAIMLAYEGPILLVIVSVALKTGAALGQPICLSLSEIVRYQQAHGA 188 Query: 170 SQSIPLVLALCACAFATF-IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 P + A +G PFD+ EAE E+ EGPL EYSG G++K ++K Sbjct: 189 YLFDPWMWPAVLTYIAFIPANLGISPFDIPEAESEVLEGPLIEYSGVALGLLKLTSAVKS 248 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +VV+ + + +F P G F +V A+ LV+ V +++ ++ R+R+D Sbjct: 249 VVVIGLGIVLFFPNGPEGLFGL------VVFALKCLVITVCGVSVLRAAVGRMRIDQAVI 302 Query: 289 ITWA---GFGFAFLAFVSL 304 G A LA V++ Sbjct: 303 FYLKWPELLGIASLALVAM 321 >UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Methanomicrobia RepID=Q2FKS6_METHJ Length = 313 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 77/303 (25%), Positives = 150/303 (49%), Gaps = 3/303 (0%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S ++ + + ++P + + +AR+ R+GP +LQ Y ++ KL ++++ + +G Sbjct: 5 SFIFAFLNVAFVLVISPFFMMVIKKVKARVQGRQGPHLLQGYYNLAKLFRKETLYSEYAG 64 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ R+ PY + ++L A +P+ + ++I LYL R A+ GLD S Sbjct: 65 FISRIAPYAALSILLVAAVMVPIFWIPEQELVTANIIVFLYLLVTGRLLIALLGLDAAST 124 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F +G+SRE L ++EP+ ++ V GS +I +I T + + ++L Sbjct: 125 FGGMGSSREMSLSAIIEPVTVVVFAALVYVTGSFSIHDIFRTATTMFPAYNPTVLLLSVP 184 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 +E G++P D E EL EG L + SG + + ++KQ +++ + + + Sbjct: 185 LFILIIVETGRVPVDNPETHLELTMVHEGMLLDTSGRNLALFELSHAVKQTLLMAILLNI 244 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 +P G +AG L+L V+ ++K V ++I LFE++ A++R P + F F+ Sbjct: 245 ILPAGIALEMSAGVLILGGVLFLLKGTVLCVIIGLFESAYAKMRFFQIPNLFMIAFFFSI 304 Query: 299 LAF 301 L Sbjct: 305 LTI 307 >UniRef50_Q11RU2 NADH-quinone oxidoreductase subunit H 2 n=5 Tax=Bacteroidetes RepID=NUOH2_CYTH3 Length = 365 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 118/339 (34%), Gaps = 53/339 (15%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-A 59 L ++ A + R A + +R GP G+LQ D+IKLL ++ + A Sbjct: 5 LFVLTLILLYAVFVVWAERKVAAFIQDRLGPMEVGPYGMLQTIADLIKLLQKEDIIATGA 64 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + ++FRL P ++ + LP + ++ + ++ ++G + Sbjct: 65 NRFLFRLAPVLIFTAIFAGFATLPFAPDLIGSKADVGVFFMITIVSLDVVGIFLAGWASN 124 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-------------- 165 + F+ +GA R + E L L + + + ++ I+ Sbjct: 125 NKFSILGAFRAIAQVISYEIPLTLSILAVVLICQTLDLQEISFQQGIYFVNKQELNTSLF 184 Query: 166 ----------------HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPL 209 W + L+LA A+ E + PFD+ E E EL G Sbjct: 185 GITSLGIDVNKIGGFVSWNAFKYPFLLLAYVVFFIASLAECNRAPFDIPEGESELVSGFH 244 Query: 210 SEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP----------------WGQMETFTAGGL 253 +EY+G F ++ L+V + V +F W T G Sbjct: 245 TEYTGFRFAILFLAEYAMMLLVAFLGVVLFFGSWNTALPNIGSLHFADWTSGTPGTIAGY 304 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 L I K + V + + + RLR+D + W Sbjct: 305 AWGLFWLISKGITVVFLQLVMRWTYPRLRVDQLMNLCWK 343 >UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n=5 Tax=Desulfovibrio RepID=B8DNI7_DESVM Length = 332 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 135/292 (46%), Gaps = 15/292 (5%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVFRLT 67 L AV L G+ R ARL R GP ++Q Y DI KL +++V P A+ F L Sbjct: 27 GGLFALAVGLFLKGLDRRIEARLQRRVGPPLIQPYLDIAKLFTKETVMPASANRAAFLLA 86 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 P + + M A LPV V LP +GDL+ + YL + + G + SPF A+G Sbjct: 87 PLLGLTGMAVCAALLPVPGVSGGLPAMGDLLVIFYLLPLPAIALMVGGSASSSPFGAMGF 146 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGS-------TNISNITDTV-YHWPLSQSIPLVLAL 179 SRE L E LL + A G +++NI D + L+ ++ AL Sbjct: 147 SREMTLMFAYEMPLLAVMLAVAMKVGMATGGGAEFSLANIVDYQLANGQLALDPVMIPAL 206 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A MG +PFD+ EAE E+ EGPL EYSG +LK +VVL + V +F Sbjct: 207 LAYLLFLPGTMGTVPFDVPEAETEIIEGPLLEYSGPALAFFHIASALKTVVVLGLGVALF 266 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLV-IALFENSMARLRLDITPRIT 290 +P GG++ + ++K + V + L +++ R R+D Sbjct: 267 LP-----GTVPGGIVANIPWFVLKCAALMAVSLTLVKSATGRFRVDQAFTFY 313 >UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase subunit H n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ19_9DELT Length = 358 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 137/334 (41%), Gaps = 43/334 (12%) Query: 2 SVLYPLIQALVLFAV-----APLLSGITRVARARLHNRRGP-----------GVLQEYRD 45 + L++ L +FAV AP+L+ + R A + +R G G+ D Sbjct: 4 DLAITLVKILFIFAVTVGFFAPVLTWVERKQSALMQDRIGANRADIMGFTFLGLFHIIAD 63 Query: 46 IIKLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLI------ 98 +K+ ++ PD A+ ++ ++P V + L +P + + +L+ Sbjct: 64 ALKMFTKEDFIPDGANKFLHTMSPIVALVPALLTFAVVPFGGQYTLFDKEVNLVISDLDV 123 Query: 99 TLLYLFAIAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGST 155 LL++FAIA + + I+G + + ++ +G+ R A + E + L + V GS Sbjct: 124 GLLFVFAIASLATYGYVIAGWSSNNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSM 183 Query: 156 NISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGS 215 ++ I ++ + L A+ E ++PFD EAE EL G +EYSG Sbjct: 184 KLTEIGTIQENFWMWGIFLQPLGFFMFLTASIAENKRIPFDAPEAESELVAGYFTEYSGL 243 Query: 216 GFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL-----------------LLALV 258 FG+ ++ + + + +F+ + ++ L L+ + Sbjct: 244 KFGMFFMAEFIEMVTIGAIMTILFLGAWHIPFLSSATLLSWFDFLGTTGSNLVLMLIHVG 303 Query: 259 IAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + K+V + + + ++ R R D ++ W Sbjct: 304 VFFAKVVFFIYLQMVIRWTLPRFRYDQIMKLGWK 337 >UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=Bacteria RepID=NUOH1_SOLUE Length = 397 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 69/377 (18%), Positives = 127/377 (33%), Gaps = 75/377 (19%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S++ + VL L + R A + R GP G+LQ D+IKL+ ++ Sbjct: 10 ISLVKAAVIFGVLMTTLAYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKED 69 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPV------VTVGSPLPQLGDLITLLYLFAIA 107 + P + ++ P++ + + L + +P V + + I +L++ A++ Sbjct: 70 LVPPYVNKPLYLAAPFLAITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVS 129 Query: 108 R---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + A++G + + ++ IG R + + E + L + ++ + ++ + + Sbjct: 130 SMGVYGIALAGWASNNKYSLIGGLRSSAQMISYELPMSLAIAAPLLISNTLSLRELVERQ 189 Query: 165 YHWP-----LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 LS P V++ A F E ++PFDL EAE EL G +EYS F Sbjct: 190 AGSILNWNLLSGPFPQVISFIIFIIAAFAETNRVPFDLPEAENELVAGFHTEYSSMKFAS 249 Query: 220 MKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG--------------------------- 252 + V M +F+ A G Sbjct: 250 FFMAEYANMITVSAMATLLFLGGWMAPWPAAYGSSLVPSILFGISGLVLLYHGVNAVRKR 309 Query: 253 --------------------------LLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 LL L K + ++ R R D Sbjct: 310 DKLTFPAFGIIFLGIAGIFLLPMVQSWLLPLFWFCAKTGAILFAFMWIRGTLPRFRYDQL 369 Query: 287 PRITWA-GFGFAFLAFV 302 TW F A L + Sbjct: 370 MGFTWKFLFPVAMLNLL 386 >UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=Anaeromyxobacter RepID=NUOH_ANADE Length = 413 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 127/332 (38%), Gaps = 30/332 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRG------PGVLQEYRDIIKLLGRQSVGP 57 + LI ++ + AR+ +R G G Q D +KLL ++ + P Sbjct: 31 VLALILVSFGAVISGMTVWWEMRVSARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIP 90 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 DA +FR PY ++ + ALP + + + A+ ++G Sbjct: 91 ADADRLLFRAAPYFVLVGFALVFVALPFGESLIAADLNVGIFYITAVTALVVVGILVAGW 150 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL----SQS 172 + S + G R A + E L + V ++G+ ++ I + WP + Sbjct: 151 SSNSKWALFGGMRSAAQVISYEIPAGLAVMVPVLMSGTLSMQGIIRSQGAWPWEWHALTN 210 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 ++A A E + PFDL EAE EL G LSEYS F + V+ Sbjct: 211 PFAMVAFAIFFVAQLAEGNRTPFDLPEAESELVAGYLSEYSAFRFALFFLVEFGNLWVMS 270 Query: 233 QMFVGVFIPWGQMETFTA------------------GGLLLALVIAIVKLVVGVLVIALF 274 + V +F Q+ G L ++++ + K +V + V+ Sbjct: 271 AISVTLFFGGWQVPFAGPEVFAAARGAGDLPGLAWWGLQLASMLVFVAKTLVLLNVVVWV 330 Query: 275 ENSMARLRLDITPRITWAG-FGFAFLAFVSLL 305 ++ R+R+D + W FAF+ FV+ L Sbjct: 331 RWTLPRIRVDQMMSLCWKYLVPFAFVCFVATL 362 >UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Methanosarcinales RepID=FPOH_METAC Length = 348 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 21/308 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ +F A + R A + R GP G+LQ D IKL ++ + P Sbjct: 21 VVGLVLVGAIFLGAMGAVWLERKLSADIQFRYGPSRVGKFGLLQLVADAIKLFTKEDMRP 80 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVG-----SPLPQLGDLITLLYLFAIAR--- 108 +A +F P M+ + + A+PV V PL I++LY+ A++ Sbjct: 81 RNADRLLFDNAPIFMMSSVFLMLVAIPVGAVFINGVEYPLAVTEMDISVLYIEAMSAITI 140 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 F + + + ++ +GA R V E L + + A + GS NI I Sbjct: 141 FGIFMIAYGSNNKYSLLGAFRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIASAQ--GL 198 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 L + A +MG+LPFD E+E+EL G ++EY+G FG+ + + Sbjct: 199 LWNIFLQPIGFIVFFIALMADMGRLPFDQNESEEELVAGWITEYTGMRFGLGFFAEYIHM 258 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALV----IAIVKLVVGVLVIALFENSMARLRLD 284 ++ + +F+ + F A +L L+ ++K V+ ++ I ++ R R+D Sbjct: 259 ILGSFLVALLFLGGWNVPAFVANNPVLGLIAPTGFFLLKTVLVLMTIIGMRWAVPRFRID 318 Query: 285 ITPRITWA 292 ++W Sbjct: 319 QVVDLSWK 326 >UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax=Coelomata RepID=Q2F2C2_DAPPU Length = 311 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 23/296 (7%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVM 71 + R + R+GP G+LQ + D IKL ++ V P S + F + P Sbjct: 20 FFTLFERKLLGYIQLRKGPNKVGLGGILQPFSDAIKLFSKEHVSPSTSNYSAFLIAPCFS 79 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 +G+ L + ++P + + L ++ L + + +G + S ++ IG R Sbjct: 80 LGLSLLMWLSIP--SFFNLLSFNKSVLFFLCGLGVGVYGLLAAGWSSNSKYSLIGCLRGV 137 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 V E L+L L+ V + + + + L +A + E Sbjct: 138 AQTVSYEVSLVLILFTPLVVTVGYELGSFSSFQEN--LWFIFIFPVAGLIWFISCLAETN 195 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFD AE E EL G +EYS GF ++ L + +F +F+ Sbjct: 196 RTPFDFAEGESELVSGYNTEYSSGGFALIMLAEYTSILFMSFLFSVIFLGGDCS------ 249 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 +V V + ++ R R D + W F ++++ L+A Sbjct: 250 ------FFVLVSFGVMAFIFVWVRGTLPRFRYDKLMYLAWKFFLPFSISYLVLMAG 299 >UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL1_THELI Length = 293 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 7/232 (3%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 LI ++ + PLL G+ R +A + NR GP +LQ + DII LL S+ P S FRL Sbjct: 3 LIGTIIAPFLPPLLDGVARKVKAMIQNRVGPPILQTWYDIITLLSMDSILP-TSSLTFRL 61 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 PYV + L +A LP + + + GDLI +Y+F + L + ++ G Sbjct: 62 APYVALASALCMALMLPYGS-DAIINFGGDLIAFIYVFTLFSAALVFGALSVDNSYSHAG 120 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 A+RE L ++ +P+ + + A GS +I+ I + +S S ++ A + T Sbjct: 121 ANRELTLSLVFKPLFAITIGTFALKTGSLSITEIARS-----ISPSPSIIGAYLLLLYVT 175 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 ++E G +P+D+AEAE E+ EGPL+EYSG G+ KW + +K+ ++ +F Sbjct: 176 YVESGFIPYDIAEAETEILEGPLTEYSGRLLGLFKWALQIKRFAMIWLFASF 227 >UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Methanosarcina RepID=FPOH_METBF Length = 346 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 21/308 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ V+F A + R A + R GP G+LQ D IKL ++ + P Sbjct: 19 IVGLVLIGVIFMGAMGAVWLERKLSADIQTRMGPCRVGKYGLLQLVADAIKLFTKEDLKP 78 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVG-----SPLPQLGDLITLLYL---FAIAR 108 +A +F M+G + + ALPV V PL I++LY+ A++ Sbjct: 79 LNADSLLFNNANIFMLGSVFLMLVALPVGAVFINGVEYPLAVTQMDISVLYIEAVSALSI 138 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 F + + + ++ +GA R V E L + + A + GS NI +I+ Sbjct: 139 FGIFMVAYGSNNKYSLLGAFRNFARMVGYEVPLGITVISVAAMTGSLNIVDISTAQGLHW 198 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 P L + +MG+LPFD E+E+EL G ++EY G FG+ + + Sbjct: 199 NIFLQP--LGCFVFFVSLMADMGRLPFDQNESEEELIAGWITEYCGMRFGLGFFAEYIHM 256 Query: 229 ----LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +V +F+G + G + + G+++ IVK+V ++VI ++ R R+D Sbjct: 257 ILGSFLVALLFLGGWNVPGFIANNSFFGIIVPTGFLIVKVVFVLMVIIGLRWAVPRFRID 316 Query: 285 ITPRITWA 292 ++W Sbjct: 317 QVVDLSWK 324 >UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS25_9EURY Length = 329 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 21/318 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLS----GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVG 56 M++LY + + L+ S GI R AR+ R GP +LQ + D +KL+ ++S+ Sbjct: 1 MNLLYATLGLIALYIYVSFASLLWEGIDRKLVARMQRRVGPPLLQPFYDFLKLMSKESII 60 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 P + + L P + + V + + P+ GD+I +YL + F + + Sbjct: 61 PKHANKFYELAPVLALAVSIALLAYTPM-GFAPLFATKGDVIVFIYLLTLIGFIRVLGAI 119 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN-----ITDTVYHWPLSQ 171 +GSP+ IGA RE ++ V E ++L L+ + + W L Sbjct: 120 SSGSPYAQIGAQREMIILVSREVPMMLALFTILWRLNNIGVEKPFSLATFYQRNIWELGT 179 Query: 172 SIPLV-----LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 + L+ L + A+ IE+G FD+ EAE E+ EGP++EYSG + + ++ Sbjct: 180 PLALIGTFILLVVFLAWLASEIEVGF--FDIPEAETEVAEGPMAEYSGRHLALFELSNAI 237 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGG---LLLALVIAIVKLVVGVLV-IALFENSMARLR 282 K V + V +F PWG G L++ ++ +K+ + V +++F RLR Sbjct: 238 KMFVSASLVVAIFFPWGISAYVGLNGIPALVVDVLFHTIKVFAVLFVSMSIFRAITGRLR 297 Query: 283 LDITPRITWAGFGFAFLA 300 + ++ W A + Sbjct: 298 ITQAVQVFWLRLFPAAII 315 >UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_THET2 Length = 365 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 21/317 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M L L+ + L ++ I R AR R GP G+LQ D IK + ++ Sbjct: 12 MVALKALLVVVGLLTAFAFMTLIERRLLARFQVRMGPNRVGPFGLLQPLADAIKSIFKED 71 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQ----LGDLITLLYLFAIA-- 107 + A ++F L P + V L +P GS + + +LYLFA++ Sbjct: 72 IVVAQADRFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVINLDLGILYLFAVSEL 131 Query: 108 -RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + +SG +GS ++ +G+ R + + E L L L + GS N+++I + Sbjct: 132 AVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKE 191 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 A A+ E + PFDL EAEQEL G +EYS + + + + Sbjct: 192 HGWLFLYAF-PAFLVYLIASMAEAARTPFDLPEAEQELVGGYHTEYSSIKWALFQMAEYI 250 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + + +F+ M + + +KL + + RLR D Sbjct: 251 HFITASALIPTLFLGGWTMPVLE-----VPYLWMFLKLAFFLFFFIWIRATWFRLRYDQL 305 Query: 287 PRITWA-GFGFAFLAFV 302 R W F A L F+ Sbjct: 306 LRFGWGFLFPLALLWFL 322 >UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Tax=Thermococcus RepID=C5A3D5_THEGJ Length = 305 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 154/301 (51%), Gaps = 7/301 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + V + L+ L++F + P L GI R +ARL RRGP ++Q + D+ KL SV P S Sbjct: 5 IKVGFELVGILIIFLLPPYLDGIARRVKARLQYRRGPPLMQTWYDLQKLFNLPSVKPTKS 64 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +F P++ + ++ A LP V P+ +L+ Y+ + F + GL + Sbjct: 65 -LLFTAAPFLALASAISAALLLPYGNV-IPVDFGFNLVVFFYVILMVSVFLILGGLSVQN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F+ IGA+REA L + VEP++ + V A AGS NI++I ++ P LVLA Sbjct: 123 AFSHIGATREAQLILTVEPLIAILYGVLAYNAGSLNIADIIANLHLTP-----SLVLAYI 177 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A A+A ++E G +PFD+AEAEQE+ GPL EYSG GV + I +K+ +L FV + Sbjct: 178 ALAYALYVESGFVPFDVAEAEQEVIGGPLGEYSGRLLGVFYYAIHIKRFALLWFFVSLLT 237 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 T L L + + V +IA E + ARLR+D ++ F + Sbjct: 238 MPWIGPINTPERAALVLALQFILTVAFYPIIAALEATNARLRIDQVVKMNVRMFFAGLVI 297 Query: 301 F 301 Sbjct: 298 L 298 >UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax=Eukaryota RepID=NU1M_ACACA Length = 369 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 120/333 (36%), Gaps = 35/333 (10%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L L L + L+ R A + R+GP G+LQ D +KL+ +++ Sbjct: 9 ILLSLYLILNVILTVAFLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPV 68 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +AS +F P +++ + L+ +P ++ + + ++ ++G Sbjct: 69 PQNASSVLFFGGPLILLILSLSAWFVIPFNNETVVSDINIGILYVFMVSSLNTLNIIVAG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E ++ + + ++GS N I L + L Sbjct: 129 WSSNSRYAFLGALRSIAQVIAYEVVIGIIIINIIVLSGSLNFLKIVWAQKD--LWYAFVL 186 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 A E + PFDLAEAE EL G E+S F + +++ + Sbjct: 187 WAQFFLFFIAMLAETNRHPFDLAEAESELVSGYNVEHSSVLFALFFLSEYANIILLCHVA 246 Query: 236 VGVFIPWGQME--------------------------TFTAGGLLLALVIAIVKLVVGVL 269 +F+ M F + ++ I+K+ + + Sbjct: 247 TILFLGGWTMPDLYFFIKFFSVEYYVSIDEFFYTLRSNFYYITWIYHSLVYIIKVYIYLF 306 Query: 270 VIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 ++ R R D R+ W F + V Sbjct: 307 AFIWVRATLPRYRYDQLMRLGWKVFVPLTIGLV 339 >UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_DESPS Length = 333 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 109/293 (37%), Gaps = 21/293 (7%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 A L R A + R GP G+LQ D IKL+ +Q V P +F + P Sbjct: 23 AAYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFMVAPV 82 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 + + L +P L+ +L + A ++G + + ++ + A R Sbjct: 83 LAMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSMMAAIR 142 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV----YHWPLSQSIP------LVLAL 179 + E +L+ V+GS + I + +HW L P + ++ Sbjct: 143 AVSQTIAYEIPMLITAITVVLVSGSVDFIEIVHSQSGGFWHWNLWPLKPGLFNIFMPISF 202 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 + E + PFDL EAE EL G +EYS GFG+ G ++ + +F Sbjct: 203 LIFFICSLAETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMGEYANIVIGACLTTLLF 262 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + GL + ++K+ + + + R + ++W Sbjct: 263 LGGWD----CPFGLFPGVWWFLIKIYILIFTFIWIRWTFPRTTIYGLLNLSWK 311 >UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Tax=cellular organisms RepID=NUOH1_ACIBL Length = 426 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 76/386 (19%), Positives = 133/386 (34%), Gaps = 85/386 (22%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S L+ + LV+F VA L++ + R A + R GP G+LQ D +KLL Sbjct: 20 SPLWATVYILVIFGVASVAVMLMTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLI 79 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++ + PD A ++F + P ++ T +P + ++ ++ + ++ Sbjct: 80 KEDIVPDGADKFLFWMAPVTVMMTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLGVLA 139 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA------GSTNISNITDTV 164 ++G + S + +G R A V E + L + + G+ ++ I Sbjct: 140 VVMAGWSSNSKYALMGGLRSAAQMVSYEVAMGLAIVSVLMMTSLQTGTGTLSMIGIVQAQ 199 Query: 165 Y---HWPLSQSIPLVL-ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 W + + P L A A A E + PFDL EAE EL G +EYSG + + Sbjct: 200 QAQGSWFIFKFFPTGLVAFVIFAIAMVAETNRAPFDLPEAESELTAGFHTEYSGFRWSLF 259 Query: 221 KWGISLKQLVVLQ-------------------------------------MFVGVFIPWG 243 G + + V + G FI W Sbjct: 260 FLGEYVAMIAVSSIAVTLWLGGWLRPFPNALSGATWDFAFSVFPALLFFVLAAGCFIGWV 319 Query: 244 QME----------TFTAGGLLLALV-----------------IAIVKLVVGVLVIALFEN 276 +M G+LL ++ K+ V + + + Sbjct: 320 RMPSKPAFKVQAIGLGIFGVLLGMIGAVLLIPAVRVRVSDIFWFSAKVGVFMYLYIWYRG 379 Query: 277 SMARLRLDITPRITWAGFGFAFLAFV 302 + R R D +I W L + Sbjct: 380 TFPRYRFDQLMKIGWKVLLPVSLGVL 405 >UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmental samples RepID=B3T913_9ARCH Length = 436 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 43/332 (12%) Query: 15 AVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP-DASGWVFRL 66 +A + + R A+L R GP G+LQ D +KL+ ++ + P A +F Sbjct: 94 LIAAAVIFVERKMLAKLQLRVGPFYCGKVEGILQIMGDGLKLISKEIIIPAKADKPIFWA 153 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P + +PV L+ + + ++G + S F IG Sbjct: 154 VPVLFAATAGAFVALIPVAPGWVVADIDLGLLAVFAVIGFFPIITVLAGWSSNSKFPFIG 213 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 R V E L+L L + G+ N+S I ++ ++P +P + Sbjct: 214 GIRALYQMVSFEIPLILSLLGIVMLTGTLNLSEIVESQVNFPWIIFMP--IGAIVFFICI 271 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME 246 E+ ++PFDL EAE E+ G L+E SG +G+++ G LK +FV +F+ Sbjct: 272 LAELERIPFDLPEAESEIVAGWLTELSGMMYGLVQLGSYLKLYAFAGLFVVLFLGGWNGP 331 Query: 247 -------------------------------TFTAGGLLLALVIAIVKLVVGVLVIALFE 275 AG ++ + I+K + I L Sbjct: 332 SVFPMEPMAKVITDGIVIMPDALVIKDIPGLPLFAGEMINGTIWFILKTAAVIFFILLPR 391 Query: 276 NSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 R+R+D+ +I W + LAFV++ A Sbjct: 392 GVFPRVRIDLLLKIGW--YKLIVLAFVNIFIA 421 >UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQH3_9EURY Length = 280 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 10/269 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-ASG 61 + + L L GI R A + R GP + Q + D+ KL ++++ PD A Sbjct: 12 IAATFLIILFAIPFGLLTKGIDRKLAAHMQWRVGPPIWQPFWDVKKLFQKETIVPDDAIS 71 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W++ P + + + I +P+ L GD+I +LYL I G + SP Sbjct: 72 WLYNAAPILCLASTVIILLYIPLGPFSPVLNGHGDVILILYLLTIPSLAMVAGGFASSSP 131 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH------WPLSQSIPL 175 F ++GA RE +L + E L + A S ++ W + + Sbjct: 132 FASVGAQREMVLMMSYEFPLAATVIALAWKISSLFPHEAVFSLTAFVKHPVWNIMGPFGI 191 Query: 176 VLALCACAFATFIEMG---KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 V A+ + G K+PFD+AEAE E+ EG EYSG G+ ++K +V+ Sbjct: 192 VGAVILLIVLLLVTTGEITKVPFDIAEAETEIAEGVFVEYSGRNLGLFYLADAVKTVVMS 251 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAI 261 + V +F P+ + AI Sbjct: 252 ALIVAIFFPYNLSPLLMPYISMPCWGWAI 280 >UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Clostridium RepID=B8I2P8_CLOCE Length = 312 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 10/311 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S+L + Q + L +APL +GI R ++++ ++ G + Q Y D+IKLL + V S Sbjct: 4 SILKFIFQMIFLLLIAPLFTGIIRKIKSKIQHKIGASIFQPYYDLIKLLKKDLVVSSTSS 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W++ + PYV L A LP++ DL+ ++YL R F A++GLDTGS Sbjct: 64 WIYTVAPYVYFITSLAAAMCLPIIYQFKGFSFYTDLLVIVYLLVAGRIFMALAGLDTGST 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQV--AGSTNISNITDTVYHWPLSQSIPL-VLA 178 F +G+SRE ++ LVEP L L + ST++ +I + + + +L Sbjct: 124 FGGMGSSRELLVSALVEPALFLIIITVGANPEVASTSVFSIYEYAVKESIGAFSTVNILL 183 Query: 179 LCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 A E ++P D EL E EYSG ++ G +KQLV + Sbjct: 184 FVAMLMVMIAESSRIPVDDPSTHLELTMVHEAMTLEYSGRHLAFIEMGSYIKQLVFMTFM 243 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 + IP G +L L I ++KL+V + A+ E + + RL P Sbjct: 244 ANILIPVG----LNMENILAGLSIYLLKLLVITFLAAIIEINTVKFRLFSLPNYAAIALI 299 Query: 296 FAFLAFVSLLA 306 + L F++ Sbjct: 300 ISVLGFLTRFV 310 >UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=Eukaryota RepID=Q9TAH6_CAFRO Length = 336 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 126/326 (38%), Gaps = 23/326 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +LY L + + + R + R+GP G+LQ D +KLL ++SV Sbjct: 8 QILYFLALIIFVLLSVAFYVLLERQILGHVTRRQGPSTVGIFGLLQTIADALKLLAKESV 67 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + + VF P G+ L +P + ++ LL L +++ ++ Sbjct: 68 FPRSINTIVFIFAPIFTCGLALANWVVIPFGNGWAVADFNLGVLYLLALSSLSVHSIIMA 127 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + +GA R A + E + L L ++ S N+++I Y+ + IP Sbjct: 128 GWSSNSKYAFLGALRSAAQMISYEIAMGLILLSVILLSQSLNLTDIVMAQYN--VWFFIP 185 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L E + PFDL EAE EL G EYS GF + ++++ Sbjct: 186 LFPLFLMFLICILAETNRHPFDLPEAEAELVSGYNVEYSAVGFVLFFLAEY-NNIIMMSA 244 Query: 235 FVGVFIPWGQMETF-------------TAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 F + G F L + +K ++ ++ + ++ R Sbjct: 245 FTNILFLGGWNVPFYSFWFFGDGILRNIFESYLWPSLFFSLKTILVMIFFVIIRTALPRY 304 Query: 282 RLDITPRITWAGFGFAFLAFVSLLAA 307 R D R+ W F LAF+ + + Sbjct: 305 RYDQLMRLGWKIFLPLALAFLIIYLS 330 >UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic n=236 Tax=cellular organisms RepID=NU1C_ARATH Length = 360 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 121/311 (38%), Gaps = 21/311 (6%) Query: 3 VLYPLIQALVLFAVAPL-LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + P+ ++ L + + R A + R GP G+LQ D KLL ++++ Sbjct: 29 IFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENL 88 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + +F + P + V +L + +P + + + +IA +S Sbjct: 89 RPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMS 148 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + + ++ +G R A + E L L + + ++ S + +I + + Sbjct: 149 GYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNL 208 Query: 175 L--VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 + ++ E +LPFDL EAE+EL G +EYSG FG+ L L+ Sbjct: 209 WRQPIGFIIFLISSLAESERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISS 268 Query: 233 QMFVGVFIPWGQMETFTAGGLLL-----------ALVIAIVKLVVGVLVIALFENSMARL 281 +++ + + L L + I + K + + V ++ RL Sbjct: 269 LFVTVLYLGGWNISSPYISILELFQRDQIFATTIGIFITLAKTYLFLFVSIATRWTLPRL 328 Query: 282 RLDITPRITWA 292 R+D + W Sbjct: 329 RMDQLLNLGWK 339 >UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alphaproteobacteria RepID=B6IT65_RHOCS Length = 323 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 157/293 (53%), Gaps = 4/293 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 ++VL+ +Q LV+ A+APLL+G+ R +ARL RRGP VLQ YR +++L +++V + + Sbjct: 10 LAVLFQCVQMLVVLALAPLLTGVVRGIKARLQGRRGPPVLQPYRALLRLTRKEAVVAENA 69 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+FR TPY++ ++ A +P T L + DLI L+ L ARFF ++ +D G+ Sbjct: 70 SWLFRATPYIVFTMLWLAAGLVPTFTTALALAPVADLIALVALLTTARFFTGLAAMDIGT 129 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F +GASREAM+ L EP +L ++ A + +T+++ I D + + L L L Sbjct: 130 AFGGLGASREAMISALAEPAMLAVIFTLAILLQTTSLAAIVDGTLGQGVGLRVSLALGLI 189 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + E G++P D EL E + EYSG +M+ L+ L+ + + + Sbjct: 190 SLIMVAIAEAGRIPVDNPATHLELTMVHEAMVLEYSGRHLALMEAAGMLRLLLFMALILC 249 Query: 238 VFIPWGQM-ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 VF+PWG + L + KL+ + +ALFE ++A++R+ Sbjct: 250 VFVPWGIAQPGDGPTAWAIGLGSFLGKLLAAAVALALFETTVAKMRVFRVGEF 302 >UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoides RepID=D2BJQ0_DEHSV Length = 316 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 3/308 (0%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VLY I + V+PL + + +A R GP +LQ Y + KL ++ V + + Sbjct: 9 VLYGFINTALALLVSPLFISLIKKVKAYAQGRVGPPLLQTYYQLYKLFKKERVYSYQTSF 68 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + RLTPY+ + M+ + ++P+V + + P LG++I LYL ++RFF A+SGLD GS F Sbjct: 69 IIRLTPYLSLAFMMVASLSVPLVFIPAADPGLGNIILFLYLMVMSRFFMALSGLDAGSSF 128 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE L ++EP++++ A V +T++ ++ V + L+L + Sbjct: 129 GGMGSSREMTLAAIIEPVIIIVFGALAYVLQTTSLFDMFAQVRKSSFLSNPSLILTGISL 188 Query: 183 AFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 +E ++P D E EL E EYSG +++ +LKQ +++ + + + Sbjct: 189 FIILIVETSRIPVDNPETHLELTMIHEAMTLEYSGPDLALIELSHALKQTLLMGVLLNII 248 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 PWG AGG+ +A + ++K + + + +FE+ MA+ RL P + F F+F+ Sbjct: 249 APWGLASAPAAGGIAVAFLAFVIKGSLLAVGVGIFESLMAKFRLFRVPGLFMLAFFFSFI 308 Query: 300 AFVSLLAA 307 + A Sbjct: 309 TVLFKFLA 316 >UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Bacteria RepID=A1ALP6_PELPD Length = 389 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 70/371 (18%), Positives = 132/371 (35%), Gaps = 69/371 (18%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----------------GVLQEYRD 45 +++ V+ VA + + + R A + +R G G++ D Sbjct: 9 LIFMGYAIAVMAGVATIFTWVERKQSAIMADRIGANRCYLRIPFTNVKIVAWGLIHGIAD 68 Query: 46 IIKLLGRQSVGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSP-------------- 90 K+L +++ P + + L P++ + +L + +A+P P Sbjct: 69 GSKMLLKENFTPTTYDRFCYNLAPWLALAPVLLVFSAIPFGGTLVPGKLIDPASFPQLSQ 128 Query: 91 --LPQLGD-------------LITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 + GD ++ +L + I ++G + + F+ +GA+R A + Sbjct: 129 IMVNFFGDKSYVMQVARLDAGILVILAISGIGILGTMLAGWSSNNKFSLLGAARAASQMI 188 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHW-----PLSQSIPLVLALCACAFATFIEM 190 E + L L G+ +++++ P I LA A E Sbjct: 189 SYEVSMGLALISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGIILQPLAFVLFLTACIAEN 248 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 ++PFDL E E EL G +EY+ G+ ++ +VV + V VF+ + T Sbjct: 249 KRVPFDLPECESELVSGYFTEYTAMKMGIFMLSEFIEIVVVSALLVTVFLGGYNLPYLTD 308 Query: 251 GGLLLA----------------LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA-G 293 G +L +V +VK+ + S+ R R D R W Sbjct: 309 AGFVLPMGKTIALSHATVVLVQIVTFLVKVFLIGCFQIQIRWSVPRFRYDQLMRFGWKFL 368 Query: 294 FGFAFLAFVSL 304 A L V+ Sbjct: 369 LPLAALNLVAT 379 >UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Actinomycetales RepID=A0QMU2_MYCA1 Length = 319 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 149/299 (49%), Gaps = 5/299 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS + Q L + A APL+ G R RARL R G GVLQ +RD+ K LG+Q + P + Sbjct: 4 MSYVAGAAQILAVMAGAPLVIGAMRQVRARLEGRGGGGVLQPWRDLRKQLGKQQISPQGT 63 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 VF P ++ G L I P+V GSPL DL ++ L + ++G+DTG+ Sbjct: 64 TVVFAAAPAIVAGTTLLIVAIAPIVATGSPLDAAADLFAVVGLLFLGTVALTLAGIDTGT 123 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-DTVYHWPLSQSIPLVLAL 179 F +GASRE + LVEP +LL ++ + AGS N+ + +T+ H S+ +LA Sbjct: 124 SFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVTNTIDHPGQVVSLTGLLAF 183 Query: 180 CACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E G+LP D EL E + EY+G +++W ++ V+L + Sbjct: 184 VALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLALVEWASGMRLTVLLALLA 243 Query: 237 GVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+PWG +A + + L K+ V + +A E +A+LRL P + F Sbjct: 244 NLFLPWGIAGGHPSAVDVAIGLAAITAKVTVLAVALAGAEVFIAKLRLFRVPELLAGSF 302 >UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax=Thermococcaceae RepID=B6YU99_THEON Length = 330 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 18/312 (5%) Query: 4 LYPLIQALVLFAVAPLL-SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + LI ++A L+ GI R AR+ R GP +LQ D KL ++++ P+ + + Sbjct: 11 VAGLIGLYAFVSLASLVWEGIDRKLVARMQRRVGPPLLQPLYDFFKLASKETIIPNTANF 70 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FR P + + + + P+ L GD+I +YL + FF + G+ +GSP+ Sbjct: 71 MFRAAPVLALATAIALLAYTPM-GFAPLLASKGDVIVFIYLLTLIGFFKILGGISSGSPY 129 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS-----NITDTVYHWPLSQSIPLV- 176 IGA+REA + V EP ++L L+ G ++ + W + + L+ Sbjct: 130 AKIGAAREAAIMVSREPAMMLALFAIIWRLGKLGVNKPFSMEVFYQYNIWEIGTPLSLIG 189 Query: 177 ----LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 L + A+ IE+G F++ +AE+E+ EG L+EYSG ++K +LK + Sbjct: 190 AVILLYVFVIWLASEIEVGY--FNIPDAEEEIAEGLLAEYSGRYLALLKLTKALKTYIAA 247 Query: 233 QMFVGVFIPWGQMETFTAGGL---LLALVIAIVKLVVGVLVI-ALFENSMARLRLDITPR 288 + V +F PWG + F GL ++ L+ +K+ + + + ++F + RL++ Sbjct: 248 SLVVAIFFPWGIADYFNLTGLPANVVNLLFHTLKVFILLFAVQSVFRATTGRLKITQAVD 307 Query: 289 ITWAGFGFAFLA 300 W A L Sbjct: 308 FLWKNVFLASLI 319 >UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM8_9BACT Length = 322 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 3/305 (0%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 +++ L+Q + +APLL G RA L NR G+LQ +R++++L ++ + P+ Sbjct: 11 LAIAISLLQMAFVLFLAPLLYGWIGTVRAILQNRSPAGILQPWRNLVRLFRKEMILPEGH 70 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +F P + +M A +P + PL + D +TL+ LF++ARF A++ +D G+ Sbjct: 71 SPLFLAVPPLFFSIMAVAALLVPFLGTSPPLAPVADAVTLVGLFSLARFSMAMAAMDLGT 130 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 PF +G RE M+ L EP L+ L+ + +GST+I +I + PL L++A Sbjct: 131 PFGDMGGRREMMVAFLTEPATLMILFTVSLWSGSTSIPSILTSFSKGPLPFHPSLLIAAM 190 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A E +LP D EL E L EYSG +M+WG K L+ L + + Sbjct: 191 AFILVFLGENARLPIDNPSTHLELTMIHEAMLLEYSGPLLALMEWGSMQKLLLYLLLGID 250 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F P G TF GLL ++ + KL + ++AL E+ A+LR+ P T + + Sbjct: 251 FFAPAGIPRTFALSGLLEGGILLLGKLFILGALLALIESLFAKLRIFRVPEFTALAYLLS 310 Query: 298 FLAFV 302 L F+ Sbjct: 311 TLGFL 315 >UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=Aquificales RepID=NUOH_AQUAE Length = 336 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 112/311 (36%), Gaps = 21/311 (6%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLG 51 S+ + ++ +++F++A L+ R + NR GP G+LQ D +KL Sbjct: 7 SLAFTFLKIVIVFSLALGIGAYLTWFERKLAGHIQNRLGPTVVGKFGILQPLADALKLAT 66 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGD---------LITLL 101 ++ + P A V+ + + + + T +P + L+ Sbjct: 67 KEVIIPRGADKPVYYAAVVMALVPSILLLTIIPFGPGFRVGNTYIEPIIADVNIALLLAF 126 Query: 102 YLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT 161 +++ + SG + S + IG+ R+A + + E +L + +AG+ + I Sbjct: 127 AFGSLSVYGTIFSGWASNSKYAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIV 186 Query: 162 DTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 + + +A F E G++PFD+ EAE EL G EY G FG Sbjct: 187 EAQIQKGVWFIFYQPVAFILYLFCMLAESGRVPFDIQEAEAELVTGYNVEYGGMKFGAFP 246 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 ++ L V G G L + K V ++ R Sbjct: 247 LAEWYVNVIALSAIAVVLFFGGWDGPHIFGPLSPYF-WFVFKTFALVFFTLWLHWTLPRF 305 Query: 282 RLDITPRITWA 292 + I W Sbjct: 306 QAKDITEIAWK 316 >UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS39_9EURY Length = 322 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 9/313 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DAS 60 ++ Y + ++ + GI R AR+ +R GP + Q + D+ KLL +++V P +A Sbjct: 5 TLFYAVAFPVLGVFLGLTYKGIDRRISARMTSRIGPPIRQPFWDVGKLLLKETVVPENAV 64 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+F P + +T+ +P + +PL GDLI +LYL + A+ G +GS Sbjct: 65 KWLFNAMPILAFASSMTLLLYIPFGILKAPLEGYGDLIVILYLLTLQSLAMAVGGFSSGS 124 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL--VLA 178 PF+++GA RE +L + E L + + A + S +++ I T +S L VL Sbjct: 125 PFSSVGAQREMVLMMSYEMPLAIVIIGFALLYKSFSLTTIASTPVWTMVSPVAALGVVLL 184 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 A T E+ KLPFD+AEAE E+ EG L+EYSG + +++ + + + Sbjct: 185 FIALLVVTPAELAKLPFDIAEAETEIAEGMLAEYSGRNLALFYLSDAVRGFAMAAIEAVL 244 Query: 239 FIP------WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 FIP +G ++ +L L++ + + + S R R++ RI W Sbjct: 245 FIPFTFSYVFGISLNGAMLYIVESLWFLFKVLIIYIAAVTIVRTSFGRFRIEQASRIFWV 304 Query: 293 GFGFAFLAFVSLL 305 L ++L+ Sbjct: 305 HVNLIALLGLALV 317 >UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=2 Tax=Embryophyta RepID=Q6JP41_9BRYO Length = 285 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 9/211 (4%) Query: 31 LHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALP 83 + R+GP G+LQ D +KL+ ++ + P ++ ++F + P + + L +P Sbjct: 2 MQRRKGPNAVGLFGLLQPLADGLKLMIKEPILPSSANLFIFIMAPVITFMLSLVAWAVIP 61 Query: 84 VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 ++ L + ++ + +G + S + +GA R A V E + L Sbjct: 62 FDYGMVLSDLNVGILYLFAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGL 121 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQE 203 + GS N S I + IPL + E + PFDL EAE E Sbjct: 122 IIITVLIRVGSCNFSEIVIAQKQ--IWFGIPLFPVFIMFFISCSAETNRAPFDLPEAEAE 179 Query: 204 LQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L G EYS GF + G +++ +M Sbjct: 180 LVAGYNVEYSSMGFALFFLGEYANMILMSRM 210 >UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchaeota RepID=A9A348_NITMS Length = 432 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 73/328 (22%), Positives = 122/328 (37%), Gaps = 39/328 (11%) Query: 15 AVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP-DASGWVFRL 66 +A + R A+L R GP G+LQ D +KL+ ++ + P A +F Sbjct: 94 LIAAATIFVERKMLAKLQLRVGPFYCGKIEGILQLMGDGLKLISKEIIIPAKADKPIFWA 153 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 P + V +PV L+ + + +S S F IG Sbjct: 154 APVIFVATAAAFVALIPVAPGWVVADVDLGLLGVFAVIGFFPIITILSAWSANSKFPFIG 213 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 R V E L+L L + G+ N+S I + ++P +P + Sbjct: 214 GIRALFQMVSFEIPLILSLLGVVILTGTLNLSEIAASQSNFPWIIFLP--VGAIVFFITM 271 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME 246 E+ ++PFDL EAE E+ G L+E+SG +G+++ G LK +FV +F+ Sbjct: 272 LAELERIPFDLPEAESEIVAGWLTEFSGMMYGLVQLGTYLKLYAFAGLFVVLFLGGWNGP 331 Query: 247 TFTAGG---------------------------LLLALVIAIVKLVVGVLVIALFENSMA 279 +L + ++K V + I L Sbjct: 332 MVVPPFPEEFLTGVEMGPLTVGPFPGLPLFDQEMLNGTLWFVLKTVGVIFFILLPRGVFP 391 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLAA 307 R+R+D+ + W LAFV++ A Sbjct: 392 RIRIDMLLSLGWTK--LIGLAFVNIFIA 417 >UniRef50_B8Y2U8 NAD(P)H-quinone oxidoreductase subunit 1 (Fragment) n=3 Tax=Poaceae RepID=B8Y2U8_FESAR Length = 363 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 112/304 (36%), Gaps = 26/304 (8%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVM 71 ++ + R A + R GP G+LQ D KLL ++ + P +F + P + Sbjct: 45 VIVWLEREIFAWIQPRIGPEYAGPLGLLQAIADGTKLLFKEDILPSRGDIPLFSIGPSIA 104 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 V +L +P+ + + + +IA ++G + + ++ G R A Sbjct: 105 VISILLSFLVIPLAYHFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAA 164 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL--VLALCACA-FATFI 188 + E L + + ++ S++ +I + + + + T Sbjct: 165 AQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNIWRQPIGFSGFSNLITLA 224 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME-- 246 E +LPFDL EAE+EL G +EYSG + + L LV +++ + Sbjct: 225 ECERLPFDLPEAEEELVAGYQTEYSGIKYALFYLVSYLNLLVSSLFVTVLYLGGWDLSIP 284 Query: 247 ------------TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + + + I + K + + + ++ R+R+D + W F Sbjct: 285 YISFFDFFKMNNAVGILEITMGIFITLTKAYLFLFISITIRWTLPRMRMDQL--LIWMEF 342 Query: 295 GFAF 298 Sbjct: 343 LLTI 346 >UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomycetales RepID=C7Q2D9_CATAD Length = 322 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 121/309 (39%), Gaps = 14/309 (4%) Query: 7 LIQALVLFAVAPLLSG-ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGP- 57 L L F V PL+ G + A A + +R GP G Q D +K ++ V P Sbjct: 10 LAIILGFFLVVPLVVGQMEHKAMAHMQSRVGPMYAGAFHGWAQLVADGVKFAQKEDVVPA 69 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQL-GDLITLLYLFAIARFFFAISGL 116 A VF+L P V + L + A+P+ L L +L + + ++G Sbjct: 70 AADRRVFQLAPAVALIPYLVVLVAIPIGPGTQVGRDLDAGLFFVLAVMGVGVLGSLMAGW 129 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + + ++ +G R A + E ++L A AG+ +++ I W + Sbjct: 130 ASANKYSLLGGIRSAAQLMAYELPMILAASSVAMAAGTLSLTGIA---VAWHWYWLPWQL 186 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + L + E+ + PFD+ A+ E+ G +EY+G F + +V+ + Sbjct: 187 MGLFVFFVSGLAELQRPPFDMPVADSEIIFGAYTEYTGIRFALFLLAEYAGIVVLSLLTT 246 Query: 237 GVFI-PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +++ W G + K +V ++ S RLR D ++ W Sbjct: 247 VLYLGGWKGPFYLGLGAAGFGWFWTLAKTLVLAFLVIWLRVSYPRLREDQLQKLAWTTLI 306 Query: 296 FAFLAFVSL 304 LA ++L Sbjct: 307 PLALAQIAL 315 >UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Euryarchaeota RepID=Q2FTW3_METHJ Length = 343 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 19/306 (6%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVF 64 ++ L L GI R+ AR+ R+GP + Q + DI KLL + SV P +A +F Sbjct: 12 AVLITLFGIIAGLFLMGIDRICAARMQMRQGPPLTQPFTDIRKLLCKDSVVPANAIPSLF 71 Query: 65 RLTPYVMVGVMLTIATALP---VVTVGSPLPQ---LGDLITLLYLFAIARFFFAISGLDT 118 P V +T+ LP ++ VG+PLP GDLI ++YL + G + Sbjct: 72 NAAPIVAFASAVTVLFYLPLGSILPVGTPLPIIGEYGDLILIMYLLTVPALAMVAGGFAS 131 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAA---QVAGSTNISNITDTVYHWPLSQSIPL 175 GSP+ ++GA RE + + E L + + A VAG ++ H ++ P Sbjct: 132 GSPYASVGAQREMVTMIAYEFPLAIAIVAIAWRLAVAGLVMPFSVNTIAAHPIWTEVGPA 191 Query: 176 -----VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 +L L A+ T E+ ++P D EAE EL G L EYSG + ++ K + Sbjct: 192 GIIGCILLLIVLAWVTPAELSRIPCDTPEAETELCGGLLVEYSGRNLALFSLSMAAKLVA 251 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLA---LVIAIVKLVVGVLV-IALFENSMARLRLDIT 286 + + V +F PW G++ A L+ ++K++V + ++L MAR R++ Sbjct: 252 MAGLAVLLFFPWNLSPVLGLSGIMGAGVDLLFFLLKVIVVMFFSVSLVRVVMARFRINTV 311 Query: 287 PRITWA 292 + W Sbjct: 312 VSLYWG 317 >UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOH_BDEBA Length = 385 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 123/349 (35%), Gaps = 60/349 (17%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 L ++ L++ P+L + R A + +R GP G++Q D +K L +++ P Sbjct: 15 LKLVVIFLMMVQAVPILVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMP 74 Query: 58 DASG-WVFRLTPYVMVGVMLTIATALPV-------------------VTVGSPLPQLGDL 97 + +++ P + +A+P+ + + Sbjct: 75 QTAKPFLYYAAPIFALIPGAVAFSAIPLSSPIQVGTFEMFGSTWGPYTFLVQGYDIGVGI 134 Query: 98 ITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNI 157 + +L + ++A + ++G +G+ +T +GA R + + E L L + + G+ N+ Sbjct: 135 VFILGVSSLAAYTLLMAGWGSGNKYTLMGALRASAQTISYELALGLSIVGVIMLYGTFNL 194 Query: 158 SNITDTVYH---------------WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 + +T P + A F E +LPFDLAE E Sbjct: 195 TEMTLAQQGPLAFSFLGHTITANWLPNWGIFYQPVGALLFFSAAFAESNRLPFDLAEGES 254 Query: 203 ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF-------------- 248 EL G +EY G F + G ++ + V F + Sbjct: 255 ELVGGFHTEYGGFKFNMFFIGEYGHMMIASGLMVLFFFGGYTIPYVSVAELNEWAAGVAS 314 Query: 249 -----TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +A L+ ++ +K + V ++ R R D + W Sbjct: 315 TAGKASALVALIHFLVFNIKFGFFMWVFIWVRWTLPRFRYDQLMDLGWK 363 >UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=2 Tax=Thermococcus RepID=B6YTW7_THEON Length = 307 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 10/304 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + + + +++ + PLL GI+R +A + R+GP V Q Y D+ LL + + P Sbjct: 5 KIAFAALSLMIIILLPPLLDGISRKIKATVQERQGPPVFQTYYDLSSLLSMEPILP-TDR 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 F + PYV ++ A LP P+ GD+ LY+ AI ++G + Sbjct: 64 LGFLIAPYVAFASAVSAALLLPFGNF-VPVAFTGDIFVFLYVLAIFSISMMMAGFLVNNT 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 ++ GA+RE ML + VEP+L + + + A S ++S I LS + +VLA Sbjct: 123 YSNAGANREMMLILSVEPILGIAIGILALKTHSLSVSGI-----PLNLSLTPSVVLAFIF 177 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM---FVGV 238 A+A + E +PFD+AEAE E+ EGPL EYSG G+ KW + +K++ ++ + F+ + Sbjct: 178 LAYAVYTECAFIPFDIAEAETEILEGPLVEYSGKLLGIFKWAMLIKRVALIWLFASFIVI 237 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 + G ++ T G + L +V LVV ++ A+ E++ AR+++ R F Sbjct: 238 PVMKGFVDITTPYGGAVTLAAQLVLLVVFYVMSAIIESTTARMKVIQAIRQNTVIFLAGI 297 Query: 299 LAFV 302 +A V Sbjct: 298 VALV 301 >UniRef50_Q08SR0 NADH-quinone oxidoreductase chain h n=3 Tax=Cystobacterineae RepID=Q08SR0_STIAU Length = 444 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 120/342 (35%), Gaps = 65/342 (19%) Query: 14 FAVAPLLSGITRVARARLHNRRGP----------------GVLQEYRDIIKLLGRQSVGP 57 +A LL+ R A + +R GP G+ D +K+L ++ P Sbjct: 1 MIIATLLTVAERKWSALIQDRIGPNRARINLPGLRNAPLAGIPHLIADAVKMLTKEDFVP 60 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLI------TLLYLFAIAR-- 108 A+ ++F+L P + G + + +P + Q D++ LLYL AIA Sbjct: 61 ALANAFIFKLGPILAFGSVFALFAVVPAGPSITLWGQRVDMVVSTPDFGLLYLLAIASLA 120 Query: 109 -FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-- 165 + +++G + + F +G R + + E L L L + ++ I T+ Sbjct: 121 VYGTSLAGWASNNKFALLGGVRASSQMISYEVALGLSLVGLIMAFSTVQMTPIVGTLAAE 180 Query: 166 -----------------------HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 P I L A+F E + PFD E + Sbjct: 181 TGASTGQARYLWQLTGADGGFDIGLPSWGFILQPLGFLGFFAASFAETKRAPFDAPEGDS 240 Query: 203 ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQME------------TFTA 250 E+ G EYSG FG+ ++ +V+ + +F + Sbjct: 241 EII-GYFVEYSGMKFGLFMISEFVEVVVLAGVTTVLFFGGWHLPFGGEWVATQLKDAPLL 299 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 G LL V + K++ + + + + R R D + W Sbjct: 300 YGTLLGTVFWM-KVLGLIFIQMVIRWTFPRFRYDQIQTLGWK 340 >UniRef50_B2ULY6 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=B2ULY6_AKKM8 Length = 422 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 68/397 (17%), Positives = 133/397 (33%), Gaps = 93/397 (23%) Query: 3 VLYPLIQALVLFAVAPLLS----GITRVARARLHNRRGP--------------------- 37 ++ LI+ ++ FA+ L I R A + +R GP Sbjct: 21 IITLLIKIVICFAITILFIPVCVYIERRVAAWIQDRVGPNRAGIPLSIFRRFGMKSDLPF 80 Query: 38 -------------------------------GVLQEYRDIIKLLGRQSVGPDASGWV-FR 65 G++Q D KL +Q P V F Sbjct: 81 KKTLDYFGLPHDGKIANLCRFFRLDRDIPIFGLVQPMVDGGKLFLKQDFTPPFVRRVYFW 140 Query: 66 LTPYVMVGVMLTIATALPVV-----TVGSPLPQLGDL----ITLLYLFAIARFFFAISGL 116 + P +++ L A +P + G+ + +L + + + +++ + ++G Sbjct: 141 IAPILVLAPPLMTAAVVPFAGDLQTSYGNVNMAVANLSVGPLWMFAISSLSVYGLVLAGW 200 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL------- 169 + S F +G R + + E + L + + + ++SNI + Sbjct: 201 SSNSKFPFLGGVRSSAQMISYEISMGLSIIPVLMIYSTLDLSNIVEYQAANGWLLLPVWG 260 Query: 170 --------SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 +P+ ++ + F E + PFD++E E +L G +EYS F Sbjct: 261 EGLSWQRWILLVPVAISFIIFLTSIFAEANRTPFDMSECETDLVGGYHTEYSSMKFAQFF 320 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLL-----------ALVIAIVKLVVGVLV 270 G +V + + +F+ G F G L L+ ++KL+ Sbjct: 321 MGEYAAMVVGSSLVITLFLG-GWSIGFGLDGWLNENVANWVAVICQLIAYVLKLLFFAFF 379 Query: 271 IALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 ++ R R D ++ W F + + L AA Sbjct: 380 FVWVRWTLPRFRYDQVMKLGWMVFFELAVINIFLTAA 416 >UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Pancrustacea RepID=Q766W0_VARHI Length = 318 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 25/295 (8%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DA 59 L+Q + + + + R R+GP G+LQ + D +KL ++ V P + Sbjct: 22 LMQWVGVLMGVAFFTLLERKILGYAGMRKGPNKVGYIGILQPFADAVKLFTKEDVVPMKS 81 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S ++ ++P + + + L + P VG + + + + +SG + Sbjct: 82 SVMLYMISPVLALFMPLCMWCVFPYWFVGVEFSWGW--LYVFCGLGMGVYSLFLSGWSSN 139 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S + +G+ R + E +L + + + GS ++ ++ + + L+ L Sbjct: 140 SKYAVMGSLRAVAQMISYEVVLAMVVMLFVFFLGSYDMG-----LWGYTSLLGVGLLPLL 194 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E + PFDLAE E EL G +EYSG GF ++ G L++ + +F Sbjct: 195 WIWMTVMLGESQRSPFDLAEGESELVSGFNTEYSGVGFALLFMGEYGAMLLMSMLSSVLF 254 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + G ++ + V L V + R+R D + W Sbjct: 255 L-----------GSVVDSIFFPVVLWFFGFVYLWARATFPRVRYDQLMYLAWKSL 298 >UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT75_THEON Length = 300 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 8/307 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M + + +VLF + P L GI R +AR+ RRGP ++Q + D+ KLL SV P Sbjct: 1 MDYVSIIAAPIVLFLLPPFLDGIGRRIKARIQYRRGPPIMQTFYDLEKLLKLPSVLP-TE 59 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 G +FRL PY+ + + LP + L LI Y+ A+ ++ + Sbjct: 60 GPIFRLAPYIALASAIAGGLMLPFGSE-PVLAFGKSLIVFFYVMAMVSVVMILAAFSVQN 118 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F+ IG RE ML + +EP+L + V A G+ N++ + + + S+ + LA Sbjct: 119 AFSHIGGHREVMLILSIEPVLAVVFGVLAFKLGTLNVAEM-----PFSANLSLSVALAYI 173 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A+A ++E G +PFD+AEAE E+ GPL+EYSG GV K+ + +K++V+L + + + Sbjct: 174 LLAYAVYVEGGFVPFDIAEAETEVIGGPLTEYSGRLLGVFKYALLVKRVVLLWLLASMIV 233 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 M + + LV +V + + E + ARLR+D + F + Sbjct: 234 -IPAMRSLGITSSMALLVAQLVVTFLLYSLAVAVEAANARLRIDQAVSLNKKVFLMSLAV 292 Query: 301 FVSLLAA 307 + L Sbjct: 293 LIIALVG 299 >UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN3_PYRAB Length = 299 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 94/299 (31%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + + ++ ++ + P L GI R +AR+ +RRGP ++Q + D++KLL SV P + W Sbjct: 2 IAFTILALGIVLFLPPYLDGIARKVKARIQHRRGPPLMQTWYDLVKLLSIPSVIPTRN-W 60 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +F+L PY+ + A LP V PL +LI Y + F ++G + F Sbjct: 61 LFKLYPYLAFASAIVAALLLPYGGV-IPLKLGYNLIVFFYAILMVSVFLMLAGFSVQNAF 119 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + +G++RE ML + VEP+L + + A AGS +I I ++ P L++A Sbjct: 120 SHLGSAREMMLILTVEPLLAIVYGILAYNAGSLDIGEIISNLHLTP-----SLIVAYAIL 174 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A++ ++E G +PFD+AEAE E+ GPL+EYSG G+ + I +K+ +L FV + + Sbjct: 175 AYSMYVESGFVPFDVAEAETEVIGGPLAEYSGRLLGIFYYAIHIKRFALLWFFVSLVV-L 233 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 + T LLAL++ ++ + VIA E + ARLR+D ++ F + + F Sbjct: 234 PLVPITTQAKALLALLLQLLLTLALYPVIASLEATNARLRIDQVAKVNVRLFFASIIVF 292 >UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergistaceae RepID=C1TPP1_9BACT Length = 332 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 14/320 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-A 59 M V+ + L++ A L G+ R A + R GP +LQ DI+KLLG++++ P A Sbjct: 7 MRVIAGIALMLLITVFAVLFEGVDRKLHAVMQRRIGPPLLQPVYDILKLLGKENIVPRWA 66 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + F P+V + + + +P+ ++ L GDLI +LYL +++ A+ G +G Sbjct: 67 TPVFFHGGPWVAMIASMMVFMYIPMGSLPPVLNGSGDLILILYLLSLSGVAVAVGGFASG 126 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA---------GSTNISNITDTVYHWPLS 170 SP +GA RE +L + E L + + A A S T + Sbjct: 127 SPIANVGAQREMILMMSYEVPLAIVVSTLAWFAYKLGMPGHPFSLETYVATSVWSVVGKA 186 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + L+ A E GK D+ EA+ E+ EG EYSG ++ G +L+ Sbjct: 187 GFLGLICLFVAILTVIPGETGKGLMDIPEAKTEILEGVTVEYSGVNLALLHIGFNLRGAA 246 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALV---IAIVKLVVG-VLVIALFENSMARLRLDIT 286 + + V +F P+ + G+ +A++ VK+ + V + + RL++ Sbjct: 247 ISALVVSLFFPFSLGKAIGLSGVPMAIIDFPWFWVKVFLVEVFGVTFLRTAFGRLKIWQA 306 Query: 287 PRITWAGFGFAFLAFVSLLA 306 WA G LA + L++ Sbjct: 307 SHFYWAQVGALSLAGMILIS 326 >UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=Helicobacter RepID=C5EY55_9HELI Length = 335 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 129/322 (40%), Gaps = 26/322 (8%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ L+ A+A + I R A R GP GVLQ D IKL ++ + Sbjct: 8 TLIKVILVVLIFSALAGFATYIERKMLAFFQRRLGPMVVGPFGVLQILADGIKLFTKEDI 67 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL------PQLGDLITLLYLFAIAR 108 P A+ +FR+ P + +P + +L++ + Sbjct: 68 VPSGANRLIFRIAPVITAATAFIAMAPIPFFPEFEIFGRVVQPIIADINVGILFVLGVGA 127 Query: 109 ---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 + ++G+ S ++ +GA+R A+ + E + L L + GS ++ +I + Sbjct: 128 AGLYGPLLAGISANSKYSLLGAARTAIQLLSFEVVSGLSLLAPIMLVGSLSLIDINNYQE 187 Query: 166 ----HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 +W + + +A + E+ + PFDL E E E+ G +EY+G +G+ Sbjct: 188 GSITNWLIFSQPLAFVLFLFAGYAGYAELNRTPFDLLEHEAEVVAGYATEYAGMRWGMFF 247 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 G + + + +F+ F GG+ + ++K++ + + + + Sbjct: 248 IGEYANMISLSFVISLLFLGGFNPLWFIPGGIAI-----LLKVMFFIFLFMWARAAYPHI 302 Query: 282 RLDITPRITWAG-FGFAFLAFV 302 R D + W F A L V Sbjct: 303 RPDQLMGLCWKVLFPLALLNIV 324 >UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=Arthropoda RepID=P92111_9HEMI Length = 310 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 110/313 (35%), Gaps = 22/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + L + + + R + + R+GP G+LQ + D +KL ++ Sbjct: 1 MYYISFFSLLLFVLVSVGFFTLLERKVLSYIQCRKGPNKLGVLGLLQPFSDGMKLFMKEQ 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P +++ ++ + P + L I P + L + L ++ + I Sbjct: 61 FFPMNSNSMIYMVCPVFSMIQSLFIWVIFPYYV--NCLEMGLGFLFFLCCSSLGIYGLMI 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S ++ +G R + E L L L + S + I+ + + L + Sbjct: 119 CGWSSNSVYSMLGCIRSISQAISYEVSLSLILLCFFLLVDSYSF--ISYYNFQFSLWLIM 176 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E + PFD +E E EL G EY G GF ++ + + Sbjct: 177 LSLPIFFRWLSCCMAESNRTPFDFSEGESELVSGFNVEYGGGGFALLFISEYSSIIFISM 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ +I +KLV+ + ++ R R D + W Sbjct: 237 ITCVIFLGSDFCS-----------LIFYIKLVLMCFLFIWVRATLPRYRYDKLMYLAWKC 285 Query: 294 FGFAFLAFVSLLA 306 + L ++ Sbjct: 286 YLPLSLNYILFFI 298 >UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfitobacterium RepID=Q24ST5_DESHY Length = 328 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 10/295 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + + ++ L+ APLL G + +A R+GP + Q YRD+ K + ++ V + + W Sbjct: 12 IFFSMLHLLIFLLAAPLLQGWIKKVKAFWQMRQGPSLFQPYRDLWKYMRKEEVVSEHASW 71 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +F +TP +++G + +P +P+ +G L L +ARFF A++GLD G F Sbjct: 72 IFLVTPSLVLGSTILAGCVVPGPWGWAPIHSMGSLFWLAASLGLARFFLALAGLDAGGTF 131 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE + LVEP +L L V A + +T++ I+ + + ++ P +LAL A Sbjct: 132 GGMGSSREVFVAALVEPGFILSLVVLALMTETTSLMGISAALQGLSIFET-PRILALFAL 190 Query: 183 AFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E+G++P D + EL EG L +YSG G + W LKQL++LQ+ + Sbjct: 191 FVIVIAELGRIPIDNPDTHLELTMIHEGMLLDYSGPSLGFLTWAEQLKQLLLLQLLAFLI 250 Query: 240 IPW------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +P G LL ++ I L + A E+ ++RL P Sbjct: 251 LPVNIQVMNSWSGGIPFGILLSHGILQIGFLALLGTFFATLESINVKVRLFRIPN 305 >UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=Arthropoda RepID=Q68RL2_9HEMI Length = 306 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 111/310 (35%), Gaps = 23/310 (7%) Query: 1 MSVLYPLIQALVLFAVA-PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 MS++ I L+ ++ L+ + R + R+GP GV Q + D +KL ++ Sbjct: 2 MSLVIGFILMLICSLISVAFLTLLERKLLGYVQLRKGPDSVGLWGVFQPFSDALKLFSKE 61 Query: 54 SVGPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 + + F L+P + V L + P + ++ + + ++ + Sbjct: 62 YIIVQKINFFPFWLSPVFSLFVSLAVWFTFPYFYILCSWKL--SVLFMFCVLSLNVYSIM 119 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 ISG + S + +G R V E + + GS N+ T + + Sbjct: 120 ISGWSSNSSYATLGCIRSVAQSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCF 179 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 V + E+ + PFD +E E EL G EY G+ F + L ++ Sbjct: 180 T--VPMFFMMFVSMLAELNRTPFDFSEGESELVSGFNIEYGGTSFAFLFLSEYLS-IIFS 236 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +F VK+V I L S+ R R D + W Sbjct: 237 SFLLTLFFCNSLNVN----------SFFFVKIVFFSFFIVLIRGSLPRYRYDKLMNLCWK 286 Query: 293 GFGFAFLAFV 302 + L+F+ Sbjct: 287 SYLGCTLSFI 296 >UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=Bilateria RepID=NU1M_MYTED Length = 305 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 115/305 (37%), Gaps = 23/305 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +V+ +I + + + + R A + R+GP G+LQ + D KLL ++ + Sbjct: 5 AVIVSIIPFVGVLLAVGFYTLLERKILAIIMIRKGPSKVSYMGILQPFSDAGKLLCKEFI 64 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + F L P +M+ + L P + + + + +I + + +++ + +S Sbjct: 65 VPTRANVGPFILAPALMLAISLLGWLLYPYKS--AEVFYVFGVILFMVITSVSVYGVMMS 122 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S ++ +GA R + E + + +G I+ +P Sbjct: 123 GWASNSKYSLLGAVRAMAQSISYEIPMGFIFFCVVLCSGVFMFQEIS-VFQQSLFFFFLP 181 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L + + E + PFD E E EL G EYSG GF VM L+ M Sbjct: 182 LCVVMLVWMLCMLAETNRAPFDFVEGESELVSGYNVEYSGGGFAVMFIAEYSSILLSSVM 241 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F + ALV + + V + S+ RLR D + W Sbjct: 242 SAAMFFGGNE-----------ALVGFFMMVFAIFFV--VVRASLPRLRYDKLMNLCWTVL 288 Query: 295 GFAFL 299 L Sbjct: 289 LCVML 293 >UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Monoblepharidales RepID=Q85MD1_9FUNG Length = 297 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 111/306 (36%), Gaps = 29/306 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + LI AL + ++ R + R GP G+LQ + D +KL+ +++V P Sbjct: 1 MKSLIVALPIVLAVAFMTLAERKLMGAIQRRIGPNSVGFLGLLQPFFDGVKLILKETVLP 60 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 +++ W+F P+ + L +P+ + ++ LL + ++ + SG Sbjct: 61 LESNHWIFVFAPFFTFYLALLNWLVIPLDKGLVLMDLEASILYLLAVSSLGVYGIIYSGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 S +T +G+ R V E + L + S N+ I L PL Sbjct: 121 AANSKWTLLGSLRSTAQMVSYEVSMSLIVLTVVYAGASVNLVEIAYLQS--GLMFIWPLW 178 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E + P DL EAE EL G ++E+S F + + + + Sbjct: 179 PIAIIAFIAGLAETNRAPMDLPEAESELVAGFMTEHSAISFTFLFLAEYTNIITMSTVIS 238 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F+ + + + S+ RLR D R+ W Sbjct: 239 LYFLGFYNP--------------------FLIYLFIWVRASLPRLRFDQLLRLGWVYLLP 278 Query: 297 AFLAFV 302 +AF+ Sbjct: 279 ILIAFL 284 >UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Tax=root RepID=NU1M_DROME Length = 312 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 107/302 (35%), Gaps = 22/302 (7%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-FR 65 + L+ + R + R+GP G+ Q + D IKL ++ P S ++ + Sbjct: 17 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYY 76 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 ++P + + L + +P G + L ++ + ++G + S + + Sbjct: 77 ISPIFSLFLSLFVWMCMPFFVKLYSFNLGG--LFFLCCTSLGVYTVMVAGWSSNSNYALL 134 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G R + E L L L + GS N+ I Y + I L Sbjct: 135 GGLRAVAQTISYEVSLALILLSFIFLIGSYNM--IYFFFYQVYMWFLIILFPMALVWVSI 192 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 + E + PFD AE E EL G EYS G ++ L + +F +F+P Sbjct: 193 SLAETNRNPFDFAEGESELVSGFNVEYSSGGLALIFMAEYASILFMSMLFCVIFLPCDVF 252 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 ++ +KL V ++ R R D + W F L ++ Sbjct: 253 N-----------LLIYMKLTFISFVFIWVRGTLPRFRYDKLMYLAWKCFLSFSLNYLLFF 301 Query: 306 AA 307 Sbjct: 302 IG 303 >UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax=Protostomia RepID=A9NI38_9CAEN Length = 327 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 105/291 (36%), Gaps = 17/291 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +SV+ L + + + + R + + R+GP G+ Q D KLL ++ Sbjct: 3 LSVVSCLCSYICVLLAVAFFTLLERKGLSYMQLRKGPNKVGIMGLPQPIADAAKLLTKEI 62 Query: 55 VGPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P + + + + P + L + P + ++ L + + + + Sbjct: 63 AKPTMANYSPYFVAPIFSFVLALLLWQLYPSLYSLGYFKWG--ILFFLCVSGMNVYGTLL 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +G+ R + E + L L + G+ + + ++ + S Sbjct: 121 AGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGTFSFIEVKESQEI--IWLSF 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 ++ E + PFD AE E EL G EY +GF ++ LV+ Sbjct: 179 LMIPVSLIWFVTCVAETNRAPFDFAEGESELVSGFNIEYGSAGFALIFLAEYANILVMSL 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +F + + ++ ++K++ + S R + D Sbjct: 239 FSALLFFGGSSVFFMNSN------IMFMLKVLFFAFLFIWVRGSYPRFQYD 283 >UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=Protostomia RepID=NU1M_PECMA Length = 354 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 11/312 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 ++ + L +V+ L+ R A R+GP G++Q + D IKL ++ Sbjct: 42 ALFWSLSFYVVVLLSVAYLTLFERKVLAASQVRKGPEMVGWLGIMQPFADGIKLFSKEYF 101 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P S +F L P M+ + P + G L +L + ++ + + Sbjct: 102 TPSNSNPALFFLGPCFMLLHSFILWGCSPGIWGCGVYFFWGGL-YVLSVLSVGVYGVVLC 160 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + GA R + E ML+ V GS ++ +++ + + Sbjct: 161 GWSSNSRYAMFGAVRALAQVISYEVMLVFLYLCPFFVVGSLDLESVSLSQVSGCNGGVLF 220 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 LVL F E + PFD E E EL G EY GF ++ L + + Sbjct: 221 LVLPW--WVFCVLAESNRAPFDFVEGESELVSGFNVEYGSGGFAMIFIAEYSNILFLSTL 278 Query: 235 FVGVFIPWGQMETFTA-GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F+ G + GL+ + VI + V +I L +S R R D+ ++ W Sbjct: 279 TSVLFLGGGNLLGNGEYFGLISSSVIGSFFSFMVVFLIVLCRSSFPRYRYDMLMKLIWCQ 338 Query: 294 FGFAFLAFVSLL 305 ++ +L Sbjct: 339 ILPILMSCFALF 350 >UniRef50_A9RAG3 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Saccharomycetales RepID=NU1M_DEBHA Length = 312 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 104/298 (34%), Gaps = 21/298 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M+ + L+ L + L+ R + R GP GVL D KLL ++ Sbjct: 1 MNFMELLLFVLSMLLAVAFLTVAERKTLGYMQRRVGPNAVGYYGVLMAMADAAKLLLKEM 60 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A ++ ++P + + L +P + + + L + ++ F Sbjct: 61 ILPTHADKFMLIMSPMMTLMSALLCWAMIPFGPGITIMDSNYGFMLALAMGSVGVFGSLF 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S ++ IG+ R + E +L + + + G+ N S + + + Sbjct: 121 AGWAGNSKYSTIGSMRSTAQLISYELVLTTVILICMLLTGTMNTSRYVELQES--MWLVV 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ E + PFD EAE EL G ++EYS S F + L Sbjct: 179 PLLPLSLMWFMGCVAECARPPFDNVEAESELVSGHMTEYSSSMFVLFFLSEYASMLFYST 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + +F +I +K + R+R D + W Sbjct: 239 LTAILFF------------GGGTGLILGLKANFFAFTYIWVRAATPRVRYDKLIAMCW 284 >UniRef50_D0LPX2 NADH dehydrogenase (Quinone) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX2_HALO1 Length = 373 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 115/342 (33%), Gaps = 54/342 (15%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLLGRQ 53 + + + VA LL+ R A + +R GP G+L D +K++ ++ Sbjct: 15 WLFVVLAFVMPVASLLTWAERRQSAMMQDRLGPNRANIGPIKLWGILHFVADALKMIKKE 74 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP---------------------- 90 P +A +F + P + + +L +P P Sbjct: 75 DFIPANAHKQLFGMAPVLALAPVLVAFAIVPFGPTIYPEFFGTALPALLPEGTPSIRLQM 134 Query: 91 LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQ 150 ++ + +IA F I+G + + + +G R + + E + L L Sbjct: 135 FAPDYGILFYFAILSIANFGATIAGWASYNKWALLGGLRASSQMMSYEVAMGLSLMGVFL 194 Query: 151 VAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLS 210 V G+ + + + + +A A E + PFDL E E E+ G Sbjct: 195 VMGTLDPGAMVEWQGTHTWGIVV-QPVAFFLFFTAAIAETKRGPFDLPEGEPEII-GYFV 252 Query: 211 EYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG------------------ 252 EYSG +G+ ++ + V + VF + A G Sbjct: 253 EYSGMRWGMFFLAEFIEIVFVAMILTTVFFGGYHVPFMDADGVFRAFGLESTWQATHGMV 312 Query: 253 LLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 ++L LV +K + + ++ R R D + W Sbjct: 313 VVLQLVTFGLKTLFFCSLQLAIRWTLPRFRADQLMELGWKKL 354 >UniRef50_A9UKA6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Gymnolaemata RepID=A9UKA6_BUGNE Length = 311 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 116/317 (36%), Gaps = 22/317 (6%) Query: 1 MSVLYPLIQALVLFAV----APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLL 50 M ++ LI++L LF + + R + R+GP G+ Q D +KL Sbjct: 1 MMMISTLIKSLTLFLCLALSVGFYTLVERKVLSYAQLRKGPNKAGFLGIPQPLADAMKLF 60 Query: 51 GRQSVGPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARF 109 +++ S ++ + ++P + +M + + +L ++ + + ++ + Sbjct: 61 TKETTKIQKSMFILYNISPVLATSIMFITWMLYNTPANQNTIIKL-SIMLFIVISSLNVY 119 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL 169 +SG + S + +GA R + E + L + ++ + N+ + + L Sbjct: 120 TIMLSGWASNSKYALLGAIRAVAQTISYEISMALLIMSILLISLNFNMEKTSISQMPT-L 178 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 L L A E + PFDLAE E EL G EY F ++ L Sbjct: 179 WMMFILPLIFSAWMITMLAETNRSPFDLAEGESELVSGFNIEYGSGEFALLFIAEYGSIL 238 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 V + + + +VK++ + R+R D + Sbjct: 239 FVTVLTATLMLKGSFNTINLT---------QMVKIMTLAFTFLWVRATFPRMRYDALMSL 289 Query: 290 TWAGFGFAFLAFVSLLA 306 TW F + V++L Sbjct: 290 TWKTFLTLTICSVTMLI 306 >UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pichia farinosa RepID=C7U009_PICFA Length = 313 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 104/308 (33%), Gaps = 21/308 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +++ L+ + L+ R A + R GP G+L D KLL ++ Sbjct: 3 LNMAELLMFMTSMTLAVAFLTVAERKTLAYMQRRVGPNAVGYYGLLMAMADAAKLLLKEM 62 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A ++ ++P + + T +P + I L + ++ F Sbjct: 63 ILPTHADKFILLMSPVITLVSATTSWAVIPFAPGVTIFDSNYGFIISLAMGSVGVFGSLF 122 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S ++ +G+ R + E +L + + G+ N+S + + + Sbjct: 123 AGWSANSKYSLLGSIRATAQMISYELVLTTVMLMCMLFGGTMNLSRYVELQET--IWFFL 180 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ E + PFD EAE EL G ++EYS S F + Sbjct: 181 PLLPTSIIWFMGCVAECARPPFDNVEAESELVSGHMTEYSSSIFVTFFTSEYASMTYLST 240 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F I +K + R+R D + W Sbjct: 241 VTAILFF------------GGGTGTITGLKANFFAFSYIWVRATTPRVRYDKLINLCWMI 288 Query: 294 FGFAFLAF 301 F AF Sbjct: 289 FLPTLFAF 296 >UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax=Protostomia RepID=Q642W4_9ANNE Length = 310 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 109/307 (35%), Gaps = 19/307 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + I L+ + + R + R+GP G+ Q D +KL ++ + Sbjct: 6 FIMIFINLLMALLAMAFYTLLERKVLGYIQLRKGPNKVSISGIPQPLSDAMKLFIKEPLS 65 Query: 57 PDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 +S + F P + ++L + + P L ++ L L ++ + +G Sbjct: 66 TTSSNFQAFCFAPMTTLLLILIMWSTYPYP--FPSLFFTLGILLFLCLSSLNVYTTLAAG 123 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E + L L A + S +++ + + + P+ Sbjct: 124 WASNSKYALLGAVRSVAQTISYEVSMALVLISALMICNSFDLNKVLTSQMSPTMLLMSPM 183 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E + PFD E E EL G EY G GF ++ + + + Sbjct: 184 ---FIMWFITCLAETNRAPFDFVEGESELVSGFNIEYGGGGFALLFMAEYASIIFMSMIS 240 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ + + + + + + ++ ++ R+R D TW Sbjct: 241 TNIFMMFQMPHEIM-------MFMFPLLICIFSVLFLWVRGALPRMRYDRLMNFTWKTLL 293 Query: 296 FAFLAFV 302 + F+ Sbjct: 294 PFSICFL 300 >UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular organisms RepID=A9GUZ6_SORC5 Length = 588 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 105/313 (33%), Gaps = 57/313 (18%) Query: 38 GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTV------GSP 90 G L D IK++ ++ P +A + L P + + L +P G Sbjct: 191 GTLHAAADAIKMIWKEDFIPKNADRLLHSLAPLLAMFPALVTFAVIPFGDKLCFEDNGDG 250 Query: 91 LPQLGDL--------------------------ITLLYLFAIARFFFA---ISGLDTGSP 121 + GDL + +LY+FA+A ++G + + Sbjct: 251 VFGFGDLPLLKRTVDQAFTCSGHVVNLQVADLNVGILYIFAMAGTGIIGAALAGWASDNK 310 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F+ +G R A V E + L + + GS + ++ + LA Sbjct: 311 FSLLGGLRAASQMVSYEVAMGLSIVGLFIIYGSVRLGDMVQWQAEHTWGIFV-QPLAFIL 369 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A E ++PFD E E E+ G EYSG FG+ G ++ + + V +F Sbjct: 370 FLAALAAETKRIPFDQPEGESEIVAGYFVEYSGMKFGMFMTGEYVELITSSALLVTLFFG 429 Query: 242 WGQMETFTAGGL--------------------LLALVIAIVKLVVGVLVIALFENSMARL 281 + G+ L ++ K ++ V F ++ R Sbjct: 430 GYHLPFLDRDGINIAFGDATLFQYKMTHFAVSLTYVLAFFGKTILMAWVQVFFRWTLPRF 489 Query: 282 RLDITPRITWAGF 294 R D R+ W Sbjct: 490 RYDQVMRLGWTKL 502 >UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L371_KORCO Length = 333 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 13/293 (4%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGP-DA 59 + F + ++ + R A++ R GP GV+Q D+I+ L ++ V P + Sbjct: 20 GLIAAFVLLLIIIWLERKIAAKVQLRYGPLYVLKPLGGVIQTIADLIRYLFQEPVIPKEV 79 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 F LTP + G+ +P+ L+ L L +A F I G + Sbjct: 80 DKAAFLLTPVFLFGLAYLPLVMIPISPAYYAFRSDLSLLIALALTTLAPIFTLIMGWASN 139 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 + F+ IG+ RE L E + L A + S ++ I + + +A Sbjct: 140 NKFSLIGSVREGYLVTSYEIPIFLSALSMAVLYNSLDLVEIAEAQRR--IWGVFLNPIAA 197 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 ++ K PF++ EAE E+ GP +EYSG +G++ +K V+ ++ +F Sbjct: 198 ANMLVLIYMSTSKFPFEIPEAESEIVAGPYTEYSGIIYGLVMGASYIKLYVLSLIYSILF 257 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + G + ++ + +K + V A R R+D I W Sbjct: 258 L--GGWNPSPSPDPFISGGVLFLKAFILVAFGAFLRAVYPRFRIDQAVNIGWR 308 >UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4 Tax=Proteobacteria RepID=A5FW44_ACICJ Length = 317 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 137/307 (44%), Gaps = 7/307 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 + Q A AP + G R+ GPGVLQ YRD+ KL + V P+ + W+ Sbjct: 7 ILQACQVAFTIAAAPFIQGCIVQFEERIQRGHGPGVLQPYRDLWKLFHKDIVVPETASWL 66 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGS-PLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 F +TP V M+T+ +PV+T PL +GD++ + + F ++GLDTGS + Sbjct: 67 FWVTPVVAFTCMMTVPILIPVLTNYPLPLSNMGDILGGGLILTLGSFMITLAGLDTGSAY 126 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC-A 181 IG+SR A++G+L EP L+L A S + + P P L L A Sbjct: 127 GGIGSSRAAVIGILAEPTLILVFVGITLFARSMLPFVVNHLLVASPAVYLGPAHLFLVAA 186 Query: 182 CAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 +E +LP + E ++E + EY+G ++KW +KQ ++ +F V Sbjct: 187 FFILLTVETDRLPIH-SSTHIEVYMIEEARVLEYAGPLHALLKWASMMKQFILYTIFCNV 245 Query: 239 F-IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +PW A G+L + IVK V+ I + ARLR F A Sbjct: 246 LTMPWFLSTRGLAPGVLGSAAGVIVKFVIVACAIVTVDTIQARLRFYRYQEPLAVSFLLA 305 Query: 298 FLAFVSL 304 LA + Sbjct: 306 VLAIIGT 312 >UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteriaceae RepID=D2RZ82_9EURY Length = 364 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 25/319 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGIT-----RVARARLH-----NRRGPG-VLQEYRDIIKLLG 51 +L + A V+ + ++G+ R A NR GPG + D ++LL Sbjct: 37 LLATFLAAFVIGNLMLAMTGVAGPWAKRKITAAFTDRIAVNRLGPGGIFIILADSVRLLS 96 Query: 52 RQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++ V P +A + L P ++ G L +P+ + L + + IA Sbjct: 97 KELVVPENADRPAYDLAPIIVAGSALLGFAVIPMGSGIHLADPEVGLAYVFAVSGIASLG 156 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW--- 167 ++G + + ++ IG R + E L++ AG+ +S I Sbjct: 157 LVMAGYASANKYSLIGGLRAVAQNIAYEIPLVVTGMSVVIFAGTLQMSEIVAAQAEPLVS 216 Query: 168 ------PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 P ++ A A F E+G+ PFD EA E+ G +EYS F ++ Sbjct: 217 FAGLDIPRWYALVNPFAFVLFLIANFAEVGRNPFDTPEAPTEIVAGYQTEYSSVYFVLIY 276 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 G L + + +F G L +V IVK+ L+ +++ R+ Sbjct: 277 LGEFLHIFLGGGIIATIF----LGGPAGPGPAALGIVWFIVKIWAIFLLTQWLRSAVPRV 332 Query: 282 RLDITPRITWAGFGFAFLA 300 R+D I W G A Sbjct: 333 RIDQLIEIGWKGLLVLSFA 351 >UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Chytridiomycetes RepID=Q950Q6_SPIPN Length = 301 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 121/315 (38%), Gaps = 32/315 (10%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ LI L + L++ R + R GP G+LQ + D IKL+ +++V Sbjct: 1 MIATLIVVLCVVLSVALMTLAERNIMGAMQRRIGPNKVGYLGLLQPFADGIKLILKETVL 60 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPV-VTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P ++S W+F P+V + L LP+ V G ++ L+ + ++ + S Sbjct: 61 PLESSHWLFLGAPFVTFYLALLNWLVLPLDYGVALSELLGGGILILIAISELSIYGVIYS 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G S + +G+ R + L L L G+ N+ +I P+S P Sbjct: 121 GWAANSKYPFLGSLRSTAQMISYSVSLSLILLTVIFTLGTVNLLDILAAQQ--PVSLFYP 178 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L+ + E + PFDL EAE EL G +E+S F G LV+ + Sbjct: 179 LLPMAILFMISAVAETNRAPFDLPEAESELVAGFFTEHSAVSFAYFFLGEYTSILVICTL 238 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG- 293 F +F + S+ARLR D R+ WA Sbjct: 239 FFILFFGVSAALP-------------------MIFFFIWLRASLARLRFDQLLRLGWAHI 279 Query: 294 --FGFAFLAFVSLLA 306 F A++ F+ Sbjct: 280 LPFTIAYILFLPPFI 294 >UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax=uncultured archaeon RepID=D1JHT1_9ARCH Length = 387 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 13/294 (4%) Query: 22 GITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMV 72 I R R+ R GP G++Q D ++ L ++ + DA F P++ Sbjct: 82 WIERKMVGRMQWRVGPREISPRTRGIIQLLADSLRFLFQEVIIHKDAHKRYFLQFPFLYF 141 Query: 73 GVMLTIATALPVVTVGSPLPQLGDLITL---LYLFAIARFFFAISGLDTGSPFTAIGASR 129 +L + GSPL + L + L + F G + + F IG R Sbjct: 142 IPVLLPLLFINAGAAGSPLVPIVSDYGLQLMVALICLMPVFILGLGWASNNRFAFIGTIR 201 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIE 189 EA L E ++ ++ + G++ + D I +A A + Sbjct: 202 EAFLYFAYEIPFIVAVFAMVVMYGTSGSVGVVDAQAG-GWWGIIQNPIAAITFFIAALMA 260 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT 249 +LPFD+ EA+QE+ GP E+SG FG+ K V+ + +F+ G Sbjct: 261 TARLPFDIPEADQEVSFGPFVEFSGIAFGLAYVMGYEKMYVLSALMTMLFLGGGSGPVIP 320 Query: 250 AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 G + L+ ++K ++ ++V+ R RLD +I W L V+ Sbjct: 321 GLGEISYLIWFVLKTLIVMIVMVNLRGVYPRYRLDQGMKIGWNAMLILALVAVA 374 >UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Archaea RepID=D2RES9_ARCPR Length = 344 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 16/297 (5%) Query: 22 GITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDASGWVFRL-TPYVMV 72 R AR+ R GP G+LQ D ++ L ++ + + V+ L P + Sbjct: 49 WFERKIAARIQWRVGPKEVSPHIGGLLQVLADALRYLYQEVIVHRDANKVYFLQLPILSF 108 Query: 73 GVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAM 132 +L T +P V + + G + L+ L A+ F G + F IG RE+ Sbjct: 109 IPILLALTLVPAGNVYALRSEFG-IPCLVALIALIPLFVIAIGWSANNRFAYIGLVRESF 167 Query: 133 LGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGK 192 + + E L+L + + + + I + + + LA AT + G+ Sbjct: 168 MYISYEIPLILSVVAMLMLYKTGDAITIVERQSIPGVFLN---PLAFLTFLIATVMASGR 224 Query: 193 LPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG 252 LPFD+ EA+QE+ GP EYSG FG++ K ++ + V +F + G Sbjct: 225 LPFDIPEADQEIAFGPYVEYSGIMFGLVMVLAYEKLYLLSLLMVILFFGGWRGFEIAVLG 284 Query: 253 LLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA---GFGFAFLAFVSLLA 306 L ++ ++K ++ + I + AR R+D RI W A +AF ++A Sbjct: 285 DLSDVIWLMLKALIVMCAIVITRAIYARYRIDQALRIGWGFMMALAIASIAFSGVIA 341 >UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Terebratalia transversa RepID=Q953X2_9BILA Length = 300 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 121/312 (38%), Gaps = 29/312 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 SV Y L + + + + R NR+GP G LQ D +KLL + V Sbjct: 3 SVTYTLFTLVPILLSMAFFTLLERKILGYAQNRKGPNKVGVGGWLQPILDAVKLLSKDLV 62 Query: 56 GPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P S V F P M+ + L S L + ++ + + +++ + +S Sbjct: 63 SPSRSSKVGFFFAPVAMILLSLIFWLNYWSAFSFSYLSKG--VLYFMCVSSLSVYPVFMS 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + +GA R + E ++L + V + G +++ + + L + Sbjct: 121 GWASNSKYALLGAIRSVAQTISYEISMVLIILVPLCLVGGFDMNLMPGFFWVGVLFPYM- 179 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 + A E + PFD AE E EL G EY G F ++ G + L + M Sbjct: 180 ----VLPWAVTVLAETNRAPFDFAEGESELVSGYNVEYGGVPFTLIFMGEYISILFLSLM 235 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ G + VK + +V L +++ RLR D+ +TW + Sbjct: 236 TAVLFMGTG---------------MVWVKTLGVAVVFVLVRSALPRLRYDLIMGLTWKCY 280 Query: 295 GFAFLAFVSLLA 306 L+ + L Sbjct: 281 LPVVLSLMVPLI 292 >UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Arthropoda RepID=Q8HQ04_THRIM Length = 306 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 119/298 (39%), Gaps = 24/298 (8%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 ++ ++ L ++ + R + R GP G+LQ D +KL ++ Sbjct: 5 QIMSLVMIILFSLVSVAFITLMERKILGYMQIRMGPNKVGLTGILQPMADAVKLYSKEIN 64 Query: 56 GPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P S + F ++P + + + LT+ +P + + L+ L + + + IS Sbjct: 65 WPTQSNSMPFFISPCLSLTLALTLCLIMPYLKPWINMKL--SLLMFLAILGLGVYPILIS 122 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S ++ IG+ R + E L+ L + ++ S + ++ +T L Sbjct: 123 GWSSNSNYSLIGSMRALAQTISYEVSLVFILLSSLFISSSLSFYSLVETQK---LFYFFL 179 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 ++ F+T E+ + PFD AE E EL G +E+S S F ++ L L+ + Sbjct: 180 FIVPFYMWLFSTVAELNRTPFDFAEGESELVSGFNTEFSSSPFAIIFMAEYLMILIFSLL 239 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 ++ ++++VK + + ++ R R D ++W Sbjct: 240 TSMMYFCSNTN------------LLSMVKTMTMMFFFIWIRATLPRYRYDKLMNLSWK 285 >UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit HyfD n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E4_9EURY Length = 319 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 7/309 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ L+Q L + A++PL+ GI + A+ +R+G + Q Y D+ K ++ V P+ +G Sbjct: 5 IVAGLVQVLTVLALSPLMVGILKKWEAKFESRKGISIFQPYYDLAKSFKKEIVVPEDAGS 64 Query: 63 VFRLTPYVMVGVMLTIATALP-VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F L P + L + +P V S L D + +LF A FF I TGS Sbjct: 65 LFILAPMLSFTAYLILPWVVPIVFGSPSWFAPLVDFLGGAFLFGFASFFSVIGTEKTGSY 124 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALC 180 +T IGA+R G EP+L+ + A + G+ N +T+ + P +L + Sbjct: 125 YTGIGATRGVTFGAFAEPVLITVFFGVALITGTNNPFLTNETLRNNLSWMLSPTHILLIT 184 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A + GKLP + + EL +G EYSG + + WG +KQ ++ +F+ Sbjct: 185 AFFLLLLFDTGKLPIE-SHGMGELGMIGQGMGLEYSGPLYALKSWGSYMKQFILFSVFIN 243 Query: 238 VF-IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 VF +PW A +L + + VK++V + I L E S+A++RL + Sbjct: 244 VFAMPWFIPLQVNALTILYGIALLFVKMLVVIFAIVLVEISVAKIRLFKIIDYLTFSYLT 303 Query: 297 AFLAFVSLL 305 A LA +S Sbjct: 304 ALLAVISFF 312 >UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IE93_9EURY Length = 321 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 7/288 (2%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLT 67 + + + L GI R AR+ NR GP V Q + D+ KLL +++ W+F Sbjct: 14 LYLFLAVVIGLLFMGIARKVTARIQNRVGPPVYQNFLDVGKLLAKKTNI--KHNWIFDFA 71 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 P + +L LP+ L GDLI LLY+ AI FA+ +G+P +G Sbjct: 72 PLFALAGVLLALAYLPMGGY-KMLSGEGDLILLLYIMAIPSLGFALGAGASGNPNAGVGV 130 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATF 187 R L + E LL L + ++S + D + L I L ++ A A Sbjct: 131 MRALTLMLSYEMPFLLVLLSLMIFYNTASLSVLLDKQMSY-LWGIIALPISALAADLALQ 189 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET 247 M + PFD+A A E+ GPL E+ G G++ + ++ +FV +F+ G + Sbjct: 190 GMMMEKPFDIAIAPHEIASGPLVEFGGKYLGMLMLFSAGSIVLETTLFVDLFLGGGIVLN 249 Query: 248 FTAGGLLLALVIAIVK---LVVGVLVIALFENSMARLRLDITPRITWA 292 G++ +V +V + V ++ R R++ + W Sbjct: 250 PATYGIIAYVVNYLVWFALIFVVWMIAVFINAVFPRFRIEQAFKFYWK 297 >UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU4_ACIC1 Length = 320 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 6/290 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VL ++Q + AP LSG ARL RRGP +LQ Y DI+K ++S+ P + W Sbjct: 8 VLLQVLQVGTVALAAPGLSGFIARLEARLQGRRGPRILQPYYDIVKFFRKESLAPLEASW 67 Query: 63 VFRLTPYVMVGVMLTIATALPVV-TVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F P+V LTI +PV+ + G PL +GD++ +L A+A F A++ +TGSP Sbjct: 68 IFLAAPFVAFVCYLTIPLLIPVLTSYGLPLGYMGDILGGGFLLALASFAVALAAAETGSP 127 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALC 180 + +G+SR G + EP++L ++ A + + + TV P +LA Sbjct: 128 YAQLGSSRSKTFGAITEPVVLFVVFTVALLTSTDLPYALAATVRQSAGQIVRPAHLLAAA 187 Query: 181 ACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A E G++P + E ++E E+SG +++WG ++KQ ++ +F+ Sbjct: 188 AFFLVILYETGRIPIETHSGTNEFGMIEEARSFEHSGPYLAMLRWGAAMKQFILYIIFLN 247 Query: 238 VFI-PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 VF+ PWG + ++LA++ + K + + +A+ ++S A+LRL Sbjct: 248 VFVAPWGLASDGSLAAVILAVLALLGKAALVGVGVAVIDDSFAKLRLFKI 297 >UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ42_THEPD Length = 322 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 10/294 (3%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASG 61 L A+ + R AR+ R GP G+LQ D KLL ++ + P Sbjct: 13 GLLFTVAMGFWFEYLERKVTARIQRRVGPLYAGPHGLLQPVYDFFKLLLKEEIVPGWTDV 72 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 + FR+ P + V + + LPV + L GD + L A+ +++G SP Sbjct: 73 FTFRVAPILAVTIPVFGMCVLPVASTKGLLSFEGDFALVFLLLALGVLTLSLTGYSVLSP 132 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV-YHWPLSQSIPLVLALC 180 +TAIG R + + E + LL L AA A + + I H L P+ LA Sbjct: 133 YTAIGVGRLLVQYSMYEGVFLLSLASAALQAKTMSFEGILAYQESHGFLGLYQPVSLAAA 192 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A +E K PFDL A+QE+ G ++E SG G M+ L + + + V VF+ Sbjct: 193 LVALLAKLE--KRPFDLPHAKQEVVAGWMTELSGRGLAFMRLYEDLSMVWGIALIVVVFL 250 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + G L +K ++ L + L + +R+R+ + W Sbjct: 251 GGPLGPGYKELGALAGFAWFALKSLIVALAVILVSATTSRVRVYGLAEVFWKRV 304 >UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=7 Tax=Coriobacteriaceae RepID=C7N623_SLAHD Length = 939 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 33/312 (10%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 ++L LI L +AP LL+GI R A++ R GP +LQ Y D+ KL+ + V Sbjct: 649 TLLRILIGTLAFAILAPVIGCLLAGIDRKLTAKMQGRVGPPLLQPYYDVQKLIAKDDVHV 708 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ + + + G G+ + ++L ++ F ++ Sbjct: 709 NSVEGTYVTAALIFAVLA------------GGIFYGGGNFLLCVFLVTLSGLMFILAAYS 756 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 T SP+ +GA REA+ + EPML+ G+ + V+ + + L Sbjct: 757 TRSPYAEVGADREALQVMSYEPMLMFLAVGLFLTLGTFD----ASGVFLYDAPPIVALWP 812 Query: 178 ALCACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 F I++ K PFDL+ A QEL +G +E SG ++ + ++ L Sbjct: 813 IFIGLMFILTIKLRKSPFDLSYSHHAHQELVKGITTEMSGKTLAKIEVMHWCESVLFL-- 870 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G + F L+LV+A+V + + +N+ AR++ + W Sbjct: 871 --------GWVGMFFVCHNPLSLVLAVVVAFLAFFLEIFIDNNFARVKWQSMLKWAWIIS 922 Query: 295 GFAFLAFVSLLA 306 G +A ++ L Sbjct: 923 GVLGIANIAALV 934 >UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dermatophagoides RepID=C1IWC6_DERPT Length = 299 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 115/311 (36%), Gaps = 26/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M L + + + + + R +H R+GP G+LQ D KLL +++ Sbjct: 1 MFYLSSIFSTIGVLLGIAFFTLVERKIMGIMHYRKGPNKVLIWGLLQPISDAAKLLTKET 60 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 +++ P + + +M++ ++ S L + +L + +++ F F + Sbjct: 61 SKLQPLKSFMYWSAPLLGMLLMMSCWLW--YESIFSLLSNKMKIFCILSIMSLSAFVFML 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 + + S ++ IG R + E ++ ++V + S + + + L Sbjct: 119 TSWGSNSKYSMIGGYRAISQIISYEVCFVIFIFVILYLMNSYSPMKMKMIQEN--LWLMF 176 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E + PFDLAE E E+ G EY G F ++ + + Sbjct: 177 LSLPLFFTWVVMCMAESNRTPFDLAEGESEIVSGFNIEYGGGLFALIFIMEYGMIMFLSF 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F L + ++++K + + R+R D + W Sbjct: 237 LSTLIF---------------LGVSMSLLKTLTFCFLFIWIRCCFPRVRYDKLMNLCWKV 281 Query: 294 FGFAFLAFVSL 304 F L+ ++L Sbjct: 282 FLPYSLSVLTL 292 >UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK2_FIBSS Length = 451 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 113/303 (37%), Gaps = 37/303 (12%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP----------------GVLQEYRDIIKLLGRQS 54 V LL + R + +R+GP G +Q D KL ++ Sbjct: 23 FVPVLYILLLIPMERRGAGFMQDRQGPNRSYIKIPYFGKIRLLGYVQNMCDGTKLFFKEM 82 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVT-------------VGSPLPQLGDLITL 100 P + ++ + P + ++ +P GS + ++ L Sbjct: 83 FAPAGVNKLLYYVAPAIPFAIVFLSPCVIPWFGPMIFDWGGETVRIAGSIIDSDVGVLLL 142 Query: 101 LYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI 160 +I+ + ++G + S ++ +GA R + + + E L L L +AGS N+++I Sbjct: 143 FGFSSISAYGAMLAGWASKSKYSFLGALRTSSMTISYEVCLGLSLMGILLLAGSFNLTDI 202 Query: 161 TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVM 220 H + + +A A+ E G+ PFD+AE E EL G +EY FG+ Sbjct: 203 VQWQEH-HVWGIVAQPVAFFCFLIASIAETGRAPFDVAEGEPELVAGYHTEYGAMQFGLF 261 Query: 221 KWGISLKQLVVLQMFVGVFIPWGQMETFTAG------GLLLALVIAIVKLVVGVLVIALF 274 G + + +F+ + T G LA++ ++ + + ++ Sbjct: 262 YMGEYSHICINSFLIATLFLGGYAVPFVTTETMQEHMGGSLAILCGVLAFIALAFLHMIY 321 Query: 275 ENS 277 S Sbjct: 322 RYS 324 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%) Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 G L+ L++ + K ++ V ++ R R D + W Sbjct: 385 AVGTALIHLLVLVAKSLIFCWVWIWVRWTLPRFRYDHVMHLGWK 428 >UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL4_9EURY Length = 345 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 15/299 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +++ +I +++ L R AR H+R GP G+LQ D++KLL ++++ Sbjct: 38 LVFAIIIGVLVTLFVYLFGWGERKLMARAHSRHGPTYVGKFGILQNLADVVKLLAKENII 97 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 PD A +F+L+ ++ + + I P+ + + LI + + + I G Sbjct: 98 PDKADNPLFKLSLPIVYALFVLIVIFTPLTSTFVGINTSIALIAVFLILSFIPILMFIIG 157 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 +G+ F +IGA R ++ + E LLL + A +A S ++S I + + + Sbjct: 158 WASGNKFGSIGAQRSIVMLISYEIPLLLVIAAIAMLAHSYSLSTIVNDQSS--IWYVALM 215 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + EM + PFDL EA+ EL G L++ S +G+ + + V + Sbjct: 216 PIGFVVFFIVMLAEMERPPFDLREADSELIAGWLTDVSAPYYGLALFLDYTRIFVGTLLI 275 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F G LL ++K+V+ + I + ++ R++++ R W Sbjct: 276 AVLFFGGWG------GPLLPPFAWILIKIVILSIAIVIIRVTVVRMKINRLLRFGWLYL 328 >UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Thermotogaceae RepID=A9BJL9_PETMO Length = 300 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 116/289 (40%), Gaps = 18/289 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS L L+ + F L GI R A++H R GP Q + DI K L + S+ Sbjct: 1 MSYLIALMIVFIGFLWQVSLDGIQRKVTAKVHRRVGPPWYQTFMDIFKALTKSSI---TH 57 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 G+++ + +G + LP + L + ++YL AI A+S +G+ Sbjct: 58 GFIYDFGVMMALGGTIATFMFLPFGNI-VAFNGLDNFFVVVYLLAIGSLGMAMSASGSGN 116 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIPLVLA 178 + IG R + E ++ ++ V G+++++ + + + L Sbjct: 117 AWAGIGIMRALTQMLAYEVPFMIVVFGMIHVYGTSSLTELAHVQQMNGIFGWHIFTMPLG 176 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 + + K+PFD A E+ GP+ EY G FG++ LV + +FV + Sbjct: 177 AIVAFISLLGMLNKVPFDTPIAPTEIASGPMVEYGGKHFGMLILQHEFATLVEVGLFVSL 236 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 F+ G L+ ++K ++ L AR R++ Sbjct: 237 FLGGG------------NLIEYLIKYFFVYTLVTLIYAVSARFRIENVV 273 >UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Ascomycota RepID=C7FEW4_BRECS Length = 352 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 117/323 (36%), Gaps = 26/323 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 V Y L+ L + L+ R + R GP GVL + D +KLL ++ + Sbjct: 14 VWYILLFILGVLLGVAYLTVAERKTMGYMQRRLGPNAVGYYGVLMAFADALKLLVKEIIV 73 Query: 57 PDASGWVFRL-TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 WV+ + P + + +L + +P T L +I LL ++ I+G Sbjct: 74 IRNGEWVYMVGAPLITLFAVLLSLSVIPFDTGLGILEGEYSIIFLLGTGSLGILGTVIAG 133 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S +T + + R + E +L +++ + S NI I D+ + ++ IPL Sbjct: 134 WMSNSKYTVLASVRTTAQLISYELILTTVVFIMVLLVNSLNIETIIDSQVY--INYVIPL 191 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E + PFD EAE EL G ++E S S F + +++ + Sbjct: 192 LPLALIYFIGALAENARPPFDNIEAESELVSGHMTELSASPFVIFFLSEYTSMVLMSMLT 251 Query: 236 VGVFIPWGQMETFTAGGL-----------------LLALVIAIVKLVVGVLVIALFENSM 278 F F L LL + ++K + S Sbjct: 252 SIFFFGGYLSWPFDINKLFFLDTLSFNNWYWLLEGLLFSSVFVIKTNFFLFTYIWVRASF 311 Query: 279 ARLRLDITPRITWAGFGFAFLAF 301 RLR D+ W AF Sbjct: 312 PRLRFDLLILFCWYVLLPLLFAF 334 >UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bilobella aurantiaca RepID=B5KMD2_9HEXA Length = 308 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 117/306 (38%), Gaps = 22/306 (7%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DA 59 L+ L L + + R + R+GP GVLQ D +KL ++ P ++ Sbjct: 11 LLIILGLLVSVAFIVLVERSVLGYIQLRKGPNKVGMMGVLQSIGDAVKLFSKEQFFPFNS 70 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + W++ L+P M ++L + P ++ S + ++ + + G + Sbjct: 71 NAWMYTLSPIFMFVIVLLMWMIAPSMSEYSGMEVG--VVLFFCYSSFVIYGMFGGGWASN 128 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S + +GA R V E L+L V + G+ ++S+ + LS I + + Sbjct: 129 SKYAMLGAMRGVAQAVSYEVSLMLYFLVLVVMMGTLDLSSYMNLRST--LSVLIMFLPMV 186 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E + PFD AE E EL G EYS GF ++ + + + + +F Sbjct: 187 LIWVSLMMAETNRTPFDFAEGESELVSGFNVEYSSGGFALLFLAEYAGIIFMSYLMIWMF 246 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 + L++ + ++ + S RLR D + W + L Sbjct: 247 FGGE-----------MHLLVVSMMGILVCFMFIWVRGSFPRLRYDKLMELAWKSYLPLSL 295 Query: 300 AFVSLL 305 + L+ Sbjct: 296 CYFMLI 301 >UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 n=7 Tax=Deltaproteobacteria RepID=B8IYV8_DESDA Length = 313 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 135/313 (43%), Gaps = 20/313 (6%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + +Q + +APLL GI +A+ R G +LQ Y D+ +L+ + V + Sbjct: 4 DIAVYFVQFALALVLAPLLPGIINRVKAKFAGRHGKPLLQTYYDLARLMRKGEVISRTTT 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVF P V + L LP+ SPL GD I YL + RF +S LDTGS Sbjct: 64 WVFACGPAVALATALCAIALLPLGGAASPLAFGGDFILAAYLLGMGRFAIMLSALDTGSA 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVA--------GSTNISNITDTVYHWPLSQSI 173 F +GASREA L EP+ L L V V + ++S++ + Sbjct: 124 FEGMGASREATFAALAEPLFFLALLVLTSVTLDMGRGPHAAFSLSSMFGGQIAGAWAMGR 183 Query: 174 P-LVLALCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQL 229 L+L C +E ++P D EL E + ++SG ++ +G +LK Sbjct: 184 GELLLLPCIFFILLLVENCRIPVDDPNTHLELTMIHEVMVLDHSGPNLAMIVYGAALKLW 243 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 + G+ P A L + ++ +++ +V+ + E+ MARLR+D P + Sbjct: 244 FFAALIAGLVTP--------ALPLWQQAGLRVLIVLLLAVVVGIVESVMARLRMDRVPYL 295 Query: 290 TWAGFGFAFLAFV 302 A LA + Sbjct: 296 LGGASAMAALALI 308 >UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Tigriopus RepID=A2T4Y1_TIGCA Length = 306 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 109/291 (37%), Gaps = 22/291 (7%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPYVM 71 ++ + R R+GP GVLQ D IKL G++ + P ++ +F + P + Sbjct: 21 FVTLMERKILGCAQFRKGPNKVSLGGVLQPIADAIKLFGKEIMSPSMSNSLLFSVAPALG 80 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + V + I ++L + G + LI +L + ++ + ++G + + + +G+ R Sbjct: 81 LVVFMLITSSLIGQSHGGFIEY--SLIYILCIMSLGVYPLFVAGWSSNNKYALLGSLRGI 138 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E L L ++ + ++S + L+ + L + + E Sbjct: 139 AQSISYEISLSLIFLSLMLLSQTFSVSGFEHFLPSGCLT--LFLSPLMLLWLVSCLAETN 196 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFD +E E EL G E+ G F M L +FI + + Sbjct: 197 RTPFDFSEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVWTSNMFIAGSSLSFSGSV 256 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G L V V ++ R R D + W L +V Sbjct: 257 GSL-----------VFVFFWMWTRATLPRFRYDKLMMLAWTSILPVSLGYV 296 >UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcaceae RepID=B6YU34_THEON Length = 309 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 6/292 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 L L + V + GI R AR+H R GP + Q D IK G++ G + Sbjct: 6 LKALFLLIYATFVGFMFMGIIRKVSARIHRRVGPPIYQPILDTIKFFGKKENI--THGLI 63 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + +G + +P+ +V S L GDLI + +L I + + +G+P+ Sbjct: 64 YDFGIIYALGATVLALFFIPLGSV-SILRAYGDLILITFLLEIPMLGIMFAAMSSGNPYA 122 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS-QSIPLVLALCAC 182 IGA R + + ++ L + A+ G+ + I S +PL+LA A Sbjct: 123 GIGAQRALLTMLAIQVPLGFAIIALAEFYGTFSTYEIVMAQQISGWSIIHLPLLLAAIAY 182 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 GK PFD+ A E+ GP+ E+ G G+++ ++ F +F+ Sbjct: 183 DIVLQAMFGKEPFDIMIAPGEISLGPMVEFGGKHMGILQIQHAIALFAETLFFSNIFLGG 242 Query: 243 GQMETFTAGGL--LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + F + L + +L I +VK + +L+ R +D + W Sbjct: 243 AVITAFASPILNTIASLAILLVKQIAVLLIAVFVSTIFPRFTIDQAAKFYWK 294 >UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ51_THEPD Length = 337 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 75/310 (24%), Positives = 126/310 (40%), Gaps = 16/310 (5%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDAS 60 L AV ++ R AR+ R GP GVLQ D + + ++ + P+ + Sbjct: 24 GLLTALAVLLIVIWAERKIAARVQMRVGPLYVTRHFGGVLQMLADGTRYMFQEFIVPETA 83 Query: 61 GWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 V + L P + + + + +P +P+ L LL + A + G + Sbjct: 84 DKVPYMLAPALALTLAIAPFALIPSAPGFAPVKSPYSLPALLAILASTPLSVLLMGWSSN 143 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 + F+ GA REA + + E L L A + GS ++ I + L ++ +A Sbjct: 144 NKFSIQGAVREAFMTLAYEVPLFLSALSMAILYGSMDLEEIVGRQF---LPGALLNPVAA 200 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A + G+LPFD+ E EQE+ GP EY+G FG+ LK + ++ +F Sbjct: 201 FTFFVAMVMSSGRLPFDIVEGEQEIVAGPYVEYTGIVFGIGMGLAYLKLYALSLLYSLLF 260 Query: 240 IPWGQMETFTAGGLLLAL--VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 + + + L V K +L + + R RLD R W + Sbjct: 261 LSGWEPLPRALYSVYPGLAGVWLFAKAFTLMLFVVFLRSVYGRYRLDQALRAGWRVYL-- 318 Query: 298 FLAFVSLLAA 307 LA VS+L + Sbjct: 319 VLAVVSILLS 328 >UniRef50_C6PUG6 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG6_9CLOT Length = 309 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 5/289 (1%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + +Q+++L V PL GI + +A L +G + Q Y D KL + + SG+ Sbjct: 4 IAINFLQSMLLIIVTPLFMGILKKFKAILRGYKGSSIFQVYYDYQKLFSKGRIRSSQSGF 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + ++ P + + +T +P S LG L ++++ +I +F + GLD S F Sbjct: 64 ITQIGPILSLAAAITAVFMIPTF-FSSGETYLGSLFLIIFMMSIVKFLNTLIGLDCASTF 122 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G SRE L +L EP++ L + S NI I I +LA + Sbjct: 123 GGMGTSRELFLSMLAEPVMFLTIMFLYFENKSFNIFTICFNNSA-GAFYGIGHILAAISF 181 Query: 183 AFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E +LP D E EL E + + SG+ ++ +K ++ L +F+ +F Sbjct: 182 FILLLTENARLPIDNPETHLELTMIHEAMILDLSGTDLAFVEMASQIKLMIFLTIFINLF 241 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 +P+G T A +L A V+ VK++V + I++ E SM + RL P Sbjct: 242 MPFGAATTLGAVIILKAAVVFFVKILVILFGISIIEISMTKSRLFRVPE 290 >UniRef50_P11658 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=Chlamydomonadales RepID=NU1M_CHLRE Length = 292 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 102/314 (32%), Gaps = 32/314 (10%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M V LI + + + + R A + R GP G+LQ + D +KL ++ Sbjct: 1 MIVASILILIVPVLLSVAMFTLAERTVMASMQRRFGPQVSGISGLLQPFWDGLKLGVKEP 60 Query: 55 VGPDASGWVFRLT-PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V PD+S P + + + + ++ + ++A + + Sbjct: 61 VLPDSSSAGAFAASPMISFVLSQVAWVGI------CISDASFQGLVIMAISSLAVYGVML 114 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +G R L V E L L + P + Sbjct: 115 AGWASNSKYAFLGCLRSVALMVSYELSLGAALLSIGLFV-TDGTGMKCLNFAEMPTTPQY 173 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 ++ E + PFDL EA EL G EYS GF + V+ Sbjct: 174 AMLPLCLIFLVCILAETKRDPFDLPEA--ELVAGYNVEYSSLGFALFFIAEYANMAVMSA 231 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + F+ +K+ ++ R R D R+ W Sbjct: 232 IASIYFLGGFSA----------------LKITALFFAFVWTRGTLPRYRYDQFMRLGWKA 275 Query: 294 FGFAFLAFVSLLAA 307 F LAF +L A+ Sbjct: 276 FLPLTLAFFALHAS 289 >UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=Epsilonproteobacteria RepID=NUOH_CAMJD Length = 332 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 116/305 (38%), Gaps = 24/305 (7%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS-GWVFRLTPYVM 71 L + R A R GP G++Q D+IKL ++ + P S ++F + P + Sbjct: 28 LATYAERKVLAYFQRRIGPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLIS 87 Query: 72 VGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 A+P++ + L+ ++ + + + GL + + + Sbjct: 88 AICAFVSLAAIPMLPEFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKW 147 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALCA 181 + +GA+R + + E + L L + GS ++ +I + S I LA Sbjct: 148 SILGAARGLVAIISYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVL 207 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A FIE + P L E + E+ G +EYSG +G+ G + + +F+ Sbjct: 208 FIIALFIETNRTPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYASMIAGAILVTLLFLG 267 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 F ++ ++ IVK + +LR D ++ LA Sbjct: 268 -----GFNGFWIIPGWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMC--YLILIPLAV 320 Query: 302 VSLLA 306 V+LL Sbjct: 321 VNLLI 325 >UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax=Embryophyta RepID=B6D432_9MARC Length = 324 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 119/321 (37%), Gaps = 71/321 (22%) Query: 1 MSVLYPLIQALVLFAVAPL-LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 + +L+PL+ + A+ L + + R A + R GP G++Q D IKL ++ Sbjct: 25 LQILFPLLILVSGVALGVLVIVWLERKISASIQQRIGPEYAGPLGIIQALADGIKLFLKE 84 Query: 54 SVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARF--- 109 S+ P +F + P++++ + + +P+ G + + I + + +I+ Sbjct: 85 SIIPSXVDEILFDIGPFLVLVPVFSSYLVIPI---GYDIILVNSDIGVFFWISISSIIPL 141 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL 169 ++G + + ++ +G R A + E L L + A Sbjct: 142 GLLMAGYGSNNKYSFLGGLRAAAQSISYEIPLALSVLSVALR------------------ 183 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 +LPFDL EAE+EL G +EYSG F L L Sbjct: 184 ---------------------ERLPFDLPEAEEELIAGYQTEYSGIKFAFFYLSSYLNLL 222 Query: 230 VVLQM-----FVGVFIPWGQMETFTAGGL-------------LLALVIAIVKLVVGVLVI 271 + F G + P M F G ++ +++ + K + + + Sbjct: 223 ISSLFVTIFYFGGWYFPIPFMSKFDQSGWDPFIVEINQVTDAVMGIIMTLAKAFLFLSIS 282 Query: 272 ALFENSMARLRLDITPRITWA 292 ++ R+R+D + W Sbjct: 283 ITTRWTLPRIRMDQLLNLGWK 303 >UniRef50_B1ZRS6 NADH dehydrogenase (Quinone) n=3 Tax=Verrucomicrobia RepID=B1ZRS6_OPITP Length = 414 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 117/349 (33%), Gaps = 57/349 (16%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP---------------------GVLQ 41 +L L LV+F +A + S R A + +R GP G+ Sbjct: 16 LLKGLAVILVIFPIAGICSMAERKVAAWVQDRPGPNRAIVPWIGWIPFLGRFLQRLGLFH 75 Query: 42 EYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVG---------SPL 91 D K+L ++ P + + F P + + LT T +P Sbjct: 76 VMADGGKMLFKEDSTPGHVNKFYFIAAPILAMIPALTTVTVVPFGAYLDEAGRLIALGLA 135 Query: 92 PQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQV 151 P ++ + + +++ + ++G + S + +G+ R + + E + L + Sbjct: 136 PVDIGILGVFAVASLSVYSLILAGWASNSKYPFLGSIRASAQLISYELSMTLAVLPVFLW 195 Query: 152 AGS------TNISNITDTVYHWP-----LSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 + + + L + ++ A F E + PFD E+ Sbjct: 196 INTPGAEATMGFTRAVEMQSGTFPQLNGLWFGFYMPVSAFIFLVALFAETNRQPFDTIES 255 Query: 201 EQELQEGPLSEYSGSGFGVMKWGISLKQL----VVLQMFVGVFIPWGQMETFTAGGLL-- 254 E +L +EY +G+ + V + +F G + P + T L Sbjct: 256 EADLVGSFHTEYGAFKWGLFFVAEYSHMIVGSAVFMLLFGGGWNPLPWLPLTTLAEWLNL 315 Query: 255 ---------LALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 L++VI + K++ + ++ R R D +I W Sbjct: 316 TSHPFLLGVLSIVIFLAKVLAMIFFFMWVRWTLPRFRYDQVMQIGWRKL 364 >UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n=11 Tax=cellular organisms RepID=B2A053_OPITP Length = 307 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 40/312 (12%) Query: 4 LYPLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDA 59 + P I+ ++ AP LL+G+ R AR+ +R+GP + Q + D++KL ++ + Sbjct: 1 MEPWIRLVLYLVAAPVVGGLLTGLDRRISARMQSRQGPPLAQPFYDVMKLWRKERIVVRK 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S + L V+ G+ DL+ ++ +A FF + Sbjct: 61 SQN------------FFILFFLLLVIFTGALFFAGSDLLLTIFALTLAAIFFVLGAYKVS 108 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 SP++ +GA RE + + EPM+LL VAGS + I P L Sbjct: 109 SPYSFVGAQRELIQMMAYEPMVLLTAIGMYMVAGSFYVHEIARH----PTLLVTTLPGVF 164 Query: 180 CACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 FA I+ K PFDL+ A QEL G +E+SG +++ + + +L Sbjct: 165 AGFLFALEIKFRKSPFDLSSSHHAHQELVRGITTEFSGRALALIEIAHWYENVFLLGWVY 224 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG--- 293 F + A + ++ L +N ARL+ R W Sbjct: 225 LFFAAIPAVGVAVAFAVFGFVI--------------LVDNVFARLKWQTALRSAWIAAFV 270 Query: 294 FGFAFLAFVSLL 305 GF + +SLL Sbjct: 271 LGFGNILVLSLL 282 >UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ceratosolen solmsi RepID=D1FKC5_9HYME Length = 314 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 115/292 (39%), Gaps = 22/292 (7%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ-SVGPDASGWVFRLTPYV 70 L+ + R + + R+GP G+LQ + D +KL ++ +VG + ++ + P Sbjct: 26 SFLTLLERKLLSYMQLRKGPNKTGFIGLLQPFSDGVKLFTKEFAVGFKVNRLLYYMCPLY 85 Query: 71 MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 + +M + T+LP G + ++ + + + SG + +P +G+ R Sbjct: 86 GMLLMFSCWTSLPYTVNFMSHGANG--LLIICILSAGVYLLIFSGWFSSTPLGMLGSIRS 143 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM 190 + E L+ ++ +AG ++ + +T ++P ++ + E+ Sbjct: 144 VAQTISYEVSLIFIIYSVLMLAGGFDLFELYETQKFSWFILTLP--ISAFMFFVSMLAEL 201 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFDL+E E EL G +EY S F + + + MF F+ Sbjct: 202 NRTPFDLSEGESELVSGFNTEYGASIFSLFFLAEYGMIMFMGFMFSLFFLGGKYF----- 256 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 V +V+ ++VI + R+R D + F F + Sbjct: 257 ------CWSFYVSVVLIIMVIIWVRGTFPRMRYDHVMTLVCKDFLFLIFGVL 302 >UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Siphonodentalium lobatum RepID=Q6VEI0_9MOLL Length = 295 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 107/297 (36%), Gaps = 33/297 (11%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + LI A+++ + + R + +R+GP G+LQ D +KLL + Sbjct: 6 YIELLIMAVMVLLTVSFYTIVERKCLSYAQSRKGPNKVVFLGLLQAVADGVKLLSKSMNE 65 Query: 57 PDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P S +V F P VM+G+ LT LP + S +G ++ +L LF + + SG Sbjct: 66 PFKSNFVYFTGAPMVMLGISLTCWYFLPGLGFKS---AVGPILLVLCLFGVNVYCLIFSG 122 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ IG R V E + S Sbjct: 123 WCSYSSYSMIGCVRAVAQSVSYEVCSFFSYCAQQLLE--------VTFFLGSSTSFFFSF 174 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + F E + PFD AE E EL G EY S F ++ L + + Sbjct: 175 LFIVILWMFVCMAETNRAPFDFAEGESELVSGFNVEYGSSLFTLIFLAEYGFILFLSSLT 234 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 V +F P ++ +V LV S+ R R D+ +W Sbjct: 235 VSLFFPHS---------------FYLMWSMVLSLVFIYSRGSLPRFRYDLLMMFSWK 276 >UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC30_AERPE Length = 375 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 18/305 (5%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVG 56 ++ +A + R A AR+ R GP G+L D+++ + +Q + Sbjct: 19 LLILGFGGALLIAIVAVWFERKAAARVQRRIGPYWASPRLGGLLHLVADMMRYMFQQVII 78 Query: 57 PDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQL-----GDLITLLYLFAIARFF 110 P + F + P V + V + +P+ S P L+ L + + F Sbjct: 79 PRTVDYFPFLVAPIVGMAVSILPFAVVPLTANPSYWPLPPGLMEYSLLLALAISTLPPIF 138 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 ++G +PFT +G REA + + E + +L L A GS NI I + Sbjct: 139 LIVAGWAANNPFTIVGGVREAFIILAYELIAILSLLAPAITVGSFNIVEIVQAQ-GFFKW 197 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 I LA A A + PF++ E+E E+ GP +EYSG + + G +++ Sbjct: 198 FIILNPLAFLAAVIAIAMSTSAFPFEIPESEPEVVAGPFTEYSGILYALNMGGAYMRRFA 257 Query: 231 VLQMFVGVFIPWGQMETFTAG---GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 + V + G G LL ++ + K + L I+ R RLD Sbjct: 258 FSLIASLVLLGGWYPVVPGEGVVMGYLLPSLVVVAKAALVTLAISFLRAVYGRYRLDQAL 317 Query: 288 RITWA 292 + W Sbjct: 318 DLAWR 322 >UniRef50_Q6APE9 Related to hydrogenase, component C-formate hydrogenlyase subunit 4 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE9_DESPS Length = 305 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 11/300 (3%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLT 67 I V APL GI +A ++GP +L +Y + KLL + SV ++ ++F++ Sbjct: 5 ISLAVAMLSAPLFPGIIGKVKAFFAGKQGPPLLIKYYTLSKLLKKGSVYSTSTSFIFKMG 64 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 P V L + P GD+I L Y+ I RFF ++ LDT SPF +GA Sbjct: 65 PTVSFTSALIVLLFFPFAGAAPLFSFHGDVIVLFYIMGIGRFFTVLAALDTASPFAGMGA 124 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISN--ITDTVYHWPLSQSIPLVLALCACAFA 185 +RE L E L L + ++ GS + + D +V + + Sbjct: 125 AREVFFSTLAEITLFAVLILFYRLNGSLSFAEYFTGDNPLSLFAVSGALMVFVIVSLFMV 184 Query: 186 TFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 E ++P D + EL E + ++SG +++ G K V P Sbjct: 185 LLTENSRVPVDDPQTHLELTMIHEAMILDHSGPDLALIELGAFYKLFFYSAFITHVIYP- 243 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 F+ G ++ ++ + + + I + E+ AR ++D P+ F AF A + Sbjct: 244 -----FSGGAGIVNALVFYTIMALLYVSIGVTESITARFKMDGVPKFILTSFALAFFAAI 298 >UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organisms RepID=A4XJP3_CALS8 Length = 286 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 34/304 (11%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + L+ ++ + +L+GI R AR+ NR GP +LQ + D+ KL ++++ ++ Sbjct: 4 IALVLLTIIIAPIIGGILTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSSTQI 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 ++ V V L + DL+ +L++ A A + + T SP+ Sbjct: 64 LYAFLFLVFNMVALVMFVL------------KMDLLLILFVLAFAVTALILGAMSTNSPY 111 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IGA RE + + EP+L+ + V GS I ++ L A Sbjct: 112 SRIGAHRELISVLAYEPVLIAMIIGIYFVTGSFKIDDVIKH----NNFLIFELPFIFIAF 167 Query: 183 AFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 + I++ K PFDL+ A QE+ +G +E++G G+++ G + +++ Sbjct: 168 TYVLTIKLRKSPFDLSTSHHAHQEIVKGITTEFAGPILGLIELGHWYELVLLF------- 220 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA-GFGFAF 298 F +V+AI+ +++G + L +N ARL I R+TW+ G A Sbjct: 221 -------LFIGLFFAKNIVVAIIAMLLGYFLEILIDNISARLTWKIMLRLTWSMALGLAL 273 Query: 299 LAFV 302 + + Sbjct: 274 VNLI 277 >UniRef50_Q6JCT2 NADH-ubiquinone oxidoreductase chain 1 n=20 Tax=Arthropoda RepID=Q6JCT2_9HEMI Length = 318 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 106/299 (35%), Gaps = 22/299 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 L ++ + F + + R + + NR+GP G+LQ + D IKL ++ Sbjct: 4 FLIMILLLISTFLSIAFFTLMERKILSYMQNRKGPNKTLIMGILQPFSDAIKLFSKEMNL 63 Query: 57 PDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 S + ++ + P + + L + P + +++ L+ + +I + Sbjct: 64 NFKSNYIIYYMFPLLNIICSLMMWMIYPFYWNFNFNKF--NILMLMSMMSINMIIIMLIS 121 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + IG R + E L++ + + N + + + L Sbjct: 122 WSSNSNYAMIGLMRSIAQMISYEINLMIIIMTIVNLTEQLNFNYMFIMQKYMMFYLY--L 179 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E + PFD +E E EL G EYS F + L++ + Sbjct: 180 MFLFYIWIITILAETNRTPFDFSEGESELISGFNIEYSSFSFAFIFLAEYSNILIMSLIT 239 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + +F + ++ +I ++ + ++ R R D +TW F Sbjct: 240 LTMFF-----------NMKMSSMIFFFTFMILCFLFIWTRCTLPRFRYDKLMYLTWIKF 287 >UniRef50_Q2IL08 Respiratory-chain NADH dehydrogenase, subunit 1 n=6 Tax=cellular organisms RepID=Q2IL08_ANADE Length = 460 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 109/331 (32%), Gaps = 49/331 (14%) Query: 17 APLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLLGRQSVGPDA-SGWVF 64 + LL+ R A + NR G G+ D +K+L ++ + + ++ Sbjct: 75 SSLLTVAERKWSALIQNRIGANRIKVFGSALGGIPFLAADALKMLTKERIETTGRTRVLY 134 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLI-------------------TLLYLFA 105 L P + + + +PV G LLYLFA Sbjct: 135 ELAPMLAFAPVFALFAIIPVGQGIELNQIPGLAGAAAAGAVEQIALQVSRTDTGLLYLFA 194 Query: 106 IAR---FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD 162 IA + A++G + + +G R + + E L L L + + + Sbjct: 195 IASLQVYGTALAGWASNNKLALLGGVRASSQMISYEVSLGLSLVGTMIAYRTLRLEEMVV 254 Query: 163 TVYHWPLSQSIPLVLA-----LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 L L L + F E + PFDL E E E+ G EYSG F Sbjct: 255 AQGTPVLGPVPALGLLLQPIGFLIFFASAFAETKRAPFDLPEGESEIV-GYFVEYSGMKF 313 Query: 218 GVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA---------GGLLLALVIAIVKLVVGV 268 G++ + +V+ + VF+ F + I K++V + Sbjct: 314 GLLFLAEFAEIVVLAGVITAVFLGGWHPILFEGWLRQNLTPFWFAAVGAGAFIAKMIVMM 373 Query: 269 LVIALFENSMARLRLDITPRITWAGFGFAFL 299 + + R R D ++ W A L Sbjct: 374 WLQLTIRWLLPRFRFDQIQKLCWKLLLPAAL 404 >UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Lepeophtheirus salmonis RepID=Q4L1B9_9MAXI Length = 295 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 112/295 (37%), Gaps = 25/295 (8%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS-VGPDA 59 +I VL VA ++ + R R+GP G+LQ + D IKL ++ Sbjct: 1 MISIPVLVNVA-FITLLERKIIGYSQARKGPNKVSFLGILQPFSDAIKLFVKEVGSFSFV 59 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + V+ ++P V + V L I P+ + LL +++ + +SG + Sbjct: 60 NYSVYWISPVVGLSVALLIWNVYPLEMSFGSWSI--SWLGLLAGMSVSVYPLFLSGWSSN 117 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 ++ IG R + E + + ++ ++GS + ++ + PL++ L Sbjct: 118 CVYSHIGGVRGVAQVISYEVVFTILVFSLMSLSGSLTLVGSMLFSEYFYVYMLSPLLVYL 177 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E + PFD +E E EL G +EY GSGF ++ L++ Sbjct: 178 --WFLTGLAETNRTPFDFSEGESELVSGFNTEYGGSGFALIFMAQYASILLLSS------ 229 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 F+ L + ++ V +G + + R R D + W Sbjct: 230 -------LFSLFLLKSSGLLFYVISSLGGFLWVWSRVTYPRHRYDWLMSLCWKSL 277 >UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasmatales RepID=Q979M4_THEVO Length = 346 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 119/304 (39%), Gaps = 18/304 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + + + +F + + R ARL R GP G LQ D IKL+G++S+ Sbjct: 25 IFETIFFLIFVFVSLIAMIYLFRKYMARLQLRYGPNRVGKFGSLQLIADAIKLVGKESIL 84 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALP---VVTVGSPLPQLGD--LITLLYLFAIARFF 110 P + ++ PY++ ++ +P +GS D LI A+ Sbjct: 85 PKLRDDFAYKTAPYIVFIGLVVGFILIPYGDFYWIGSLTITHSDVSLILFFGAIAMMPIG 144 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN--ISNITDTVYHWP 168 ++G+ + + + +GA R V E ++L + + N + V Sbjct: 145 EILAGISSHNKYALLGAMRGVAKDVSFEVPMMLSAIALVMMDSAVNKTPLEFSSLVSTQF 204 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 + I L L A PFDL+E++ E+ G +EYSG FG+ G+ Sbjct: 205 IPFGILQPLGLFVFMVAMIARSSYTPFDLSESDSEIVSGYSTEYSGMRFGLFYMGMFGSI 264 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 + + +++ + G + ++K ++ VL+ L SM R+R+D Sbjct: 265 FLGSLVISLLYLGGYNGPYSSYAG----FIYLLIKGLIMVLISFLIWLSMPRIRIDRFVN 320 Query: 289 ITWA 292 W Sbjct: 321 FGWK 324 >UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE2_9FIRM Length = 287 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 29/294 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M V+ L L+ V LL G+ R AR+ R+GP ++Q + D+ KL +Q + ++ Sbjct: 2 MPVVSVLAYLLLAPLVGALLDGLDRRVSARMQARQGPPMMQPFYDLKKLFSKQMIAVNSV 61 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 + L+ + + V GS L D++ L++ + A F ++ S Sbjct: 62 QMLLNLSYLIFLAVA------------GSMLFAGADILMCLFILSTADMFLVMAASSDSS 109 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 PF+ +GA RE + + EP+ LL GS ++ +I + L+ L Sbjct: 110 PFSTLGAGREMIQMMAYEPLTLLMAVGFYLATGSFHVGDIIRMSHSAVLTMPG----FLL 165 Query: 181 ACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 F T I++ K PFDL+ A QE+ +G +E +G VM + +++L + Sbjct: 166 GFMFITAIKLRKSPFDLSTSHHAHQEMVKGITTEMAGPTLAVMNIAEYYEMVLMLGIVAL 225 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 F+ + IAIV +V L+ L++N AR++ W Sbjct: 226 FFL----------NEHWWSWPIAIVACLVVYLLEILWDNVAARVKWRTLLDGCW 269 >UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Brachionus plicatilis RepID=B1GYJ7_BRAPC Length = 299 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 25/290 (8%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVM 71 + R HNR GP G+LQ D KLL +QS+ P A+ + + ++P++ Sbjct: 19 FFTLFERKVMGLFHNRLGPNKVSFIGLLQPLLDAFKLLSKQSLTPLRANKFTYHISPHLA 78 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + + L I +P + + + L+ +I F ++G + S ++ IG+ R Sbjct: 79 LVLSLFIWLTMPTLYMMVNMNY--SLVMFFCAGSIMVFSVLLAGWSSNSKYSLIGSLRSV 136 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E + + + + S ++ S L+ L T E Sbjct: 137 AQSISYESVFSTLIVLVLILIMSY-------SIRSSFSLSSALLIPVLPLWLICTLAETH 189 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFD +E+E EL G +EYSG+ F + L + +F W T Sbjct: 190 RAPFDFSESESELVSGFNTEYSGAYFAFIFLSEYTVLLYSCMLITLLFFSWLIPHT---- 245 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 + I+ + + + R R D+ +W L Sbjct: 246 -----IFFVIIGTLFMSFIFIWIRITFCRFRYDMLMMTSWKVLLPVTLML 290 >UniRef50_B9LUF2 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Halobacteriaceae RepID=B9LUF2_HALLT Length = 357 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 121/323 (37%), Gaps = 29/323 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGIT-----RVARARLH-----NRRGP-GVLQEYRDIIKLLG 51 V+ LI A ++ + SGI R A NR GP G+L ++LL Sbjct: 26 VVASLIGAALVANIILAFSGIAGPWAKRKITAAFTDRIAVNRIGPFGLLIIPAAAVQLLA 85 Query: 52 RQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGD----LITLLYLFAI 106 ++ + P+ + + P ++ + + +P+ +G L D L + +I Sbjct: 86 KELIIPEGVDRPTWDIAPILLPASAMLGFSVIPMGQIGPLNIHLADPEVGLALVFAFASI 145 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV-- 164 A ++G + + ++ +G R + E L++ AG+ IS + Sbjct: 146 ASVSLVMAGYASNNKYSLLGGLRAVAQNLAYEIPLIVTAMSVVVFAGTLQISGVVGAQTE 205 Query: 165 -------YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGF 217 + P + A A E+G+ PFD+ EA E+ G +EYS + F Sbjct: 206 TLVTIAGFDIPAWFAFVNPFAFVLFLTANMAEIGRNPFDIPEAPTEIVGGYQTEYSSAYF 265 Query: 218 GVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENS 277 + G + + + VF+ G ++ + +VK+ L + Sbjct: 266 VLFYLGEFVHIFLGGAILSVVFLGGAS----GPGPESISFIWFVVKVWGFFLFTQWARAA 321 Query: 278 MARLRLDITPRITWAGFGFAFLA 300 + R+R+D I W G A Sbjct: 322 IPRVRIDQLIEIGWKGMLVLSFA 344 >UniRef50_A9FF80 Formate hydrogenlyase subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF80_SORC5 Length = 307 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 10/285 (3%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 L L + +L+G+ ++ R+GP VLQ D+ +L + SV + +FR+ Sbjct: 6 LANVAALVVMPFVLTGVINRVKSLWSGRKGPPVLQLAHDVRRLFRKSSVYSTTTTPLFRI 65 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 PYV + + A P++ D + Y++ + R ++ LDTGS F +G Sbjct: 66 APYVFLATAVGSALIAPLLGATPLASFQLDFVWFAYVWGLGRVAVMLAALDTGSSFEGMG 125 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 A+REA+ L+EP L L + V G + H S + A+ A Sbjct: 126 AAREAVFSSLLEPALFLVTGALSFVGGRRTLHEALAPHLHAGASAFVWGA-AVVAMLIVL 184 Query: 187 FIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 +E ++P D EL E + ++SG + G ++K V + + PW Sbjct: 185 QVETARMPVDDPTTHLELTMVHEVMILDHSGPDLACIHLGSAIKLFVGASIVATLLNPWA 244 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 LAL +A+ VI E+ +ARL+L P+ Sbjct: 245 GSGGAACAAANLALTLAV------GAVIGTIESLVARLKLRSVPQ 283 >UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax=Eukaryota RepID=NU1M_NEUCR Length = 371 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 126/349 (36%), Gaps = 46/349 (13%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S+L L+ + ++ R A + R GP G+LQ + D +KLL ++ Sbjct: 8 ISILEVLLVLVPSLLAVAYVTVAERKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEY 67 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V A+ +F L P + + L +P ++ +L + ++A + + Sbjct: 68 VALTQANMTLFFLGPVITLIFSLLGYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILL 127 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S + +G+ R A + E +L + + + GS N+ +T + + Sbjct: 128 AGWSANSKYAFLGSLRSAAQLISYELVLSSAILLVIMLTGSFNLG--VNTESQRAVLFVL 185 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV-- 231 PL+ + E + PFDLAEAE EL G ++E++ F +++ Sbjct: 186 PLLPIFIIFFIGSIAETNRAPFDLAEAESELVSGFMTEHAAVVFVFFFLAEYGSIVLMCI 245 Query: 232 --LQMFVGVFIPWGQMETFTAGGLLLALVIAI---------------------------- 261 +F+G ++ + F + + + Sbjct: 246 LTSILFLGGYLFINLKDVFNILDFVYSNLFIFEINWMVSERSYTEDFFNNYKSILEGWLY 305 Query: 262 -----VKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 +K + + + L S R+R D W A + L+ Sbjct: 306 GWIIGLKSSIMIFIFILGRASFPRIRYDQLMGFCWTVLLPIIFALIILV 354 >UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota RepID=Q0W3I4_UNCMA Length = 306 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 21/287 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + P++ ++ + LL GI R ARL NRRGP ++Q + D+ KL G++ + + Sbjct: 16 TYGLPVLLLILSPIIGGLLMGIDRKLTARLQNRRGPPIVQPFYDVFKLFGKEDNVMNKAY 75 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 VF L V + L + DL+ + ++F ++ F ++G S Sbjct: 76 LVFGLAYQTTVVLSLALLLF------------EYDLLVIAFVFGLSFIFLVLAGYSVRSQ 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F+ IG++RE + + EP+LLL +++ V GS + I L LAL A Sbjct: 124 FSYIGSNRELLQMMTYEPILLLVVFLIRLVTGSFEVEAIYKVE-----PLLYTLPLALLA 178 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 I+ K P+D++ A QE+ +GP++E++G G+++ + +L F+ Sbjct: 179 IFLILPIKFRKSPYDISSAHQEIAQGPMTEFAGKYLGLIESAHFFEMFFMLWFIGLFFVH 238 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 + T G ++ L + + + +N+ ARLR+D + Sbjct: 239 DLVIGAITIPGWIMRLGLMF----FAYIFSIVVDNATARLRVDQMLK 281 >UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Inversidens japanensis RepID=Q94QP9_9BIVA Length = 292 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 105/299 (35%), Gaps = 27/299 (9%) Query: 10 ALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV 63 +V L+ + R + + R+GP G+ Q D +KLL + + P + Sbjct: 5 VVVALVGMAFLTLLERKSLGYMQLRKGPNKLGLTGLPQPLADAMKLLTKTTSTPTICNPI 64 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 ++ ++ + L+ T S + L+ + + A A + + G T S F Sbjct: 65 -AMSVAPLLALALSALLWHLYPTTHSVSHKSLGLLLFICISATAVYSIMVGGWSTNSKFA 123 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 +GA R + E ++L L ++ + ++S + + I + Sbjct: 124 LLGAMRAMAQTISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLI--IPMTLVWL 181 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E + PFD AE E EL G EYSG+ F ++ L L Sbjct: 182 TIMLAETNRAPFDFAEGESELVSGFNVEYSGTKFAMLFMAEYLNIL-------------- 227 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 F + L+ + + L ++ R R D+ + W L F+ Sbjct: 228 ----FMGLLSSILLLNSTSWAPLFTFFFLLARGTLPRHRYDLMMGMAWESLIPITLTFL 282 >UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax=Araneae RepID=Q1W1M9_9ARAC Length = 306 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 125/301 (41%), Gaps = 23/301 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + + +I +L +VA + + R + + R+GP G+LQ + D IKL + Sbjct: 3 MFINFIMISLSILISVA-FYTLLERKILSYIQIRKGPNKVGMMGILQPFSDAIKLFNKNL 61 Query: 55 VGPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ + + +TP++ + + L + + + + + + L+ L +++ +F + Sbjct: 62 LPLESMNFTLSFMTPFMSLFISLCMISIM-MFNHSTLIDIKHSLLMFFILSSMSVYFILL 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G T S + +G+ R + E + + ++ S + + + +T Y L Sbjct: 121 IGWSTNSKYCHLGSIRSVAQMISYEVPFFMVILFLVLLSQSYSFTQMEETQYL--LYYFW 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 +L + E + PFD AE E EL G EY G F ++ L L++ Sbjct: 179 GNMLLFMMWLSSCLAETNRSPFDFAEGESELVSGFNVEYMGGLFALIFLSEYLSMLILSM 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F + + +++ +++ + + + R R D+ ++W Sbjct: 239 ISTMMFF------------SPIKSINSMIIMIMITISLIWVRGTYPRFRYDMLMLMSWKM 286 Query: 294 F 294 F Sbjct: 287 F 287 >UniRef50_Q8WF33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Veneroida RepID=Q8WF33_VENPH Length = 309 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 108/308 (35%), Gaps = 19/308 (6%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-A 59 + +LV+ R L R+GP G++Q D +KL ++ + P A Sbjct: 4 FLVSLVMLMSVAFFIVTERKGLGMLQLRQGPNKVGLKGLVQFLADGVKLFTKEMIMPLFA 63 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S ++ + P + ++ P+ + S L L+ L + + A + + G Sbjct: 64 SEGLYTVGPLICFFCAYSLWVLFPM--MFSSLKITLGLLFFLCVSSAAVYGVFMVGWSCD 121 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S + +GA R V E L L+ + GS ++ P S L Sbjct: 122 SRYGFLGAMRAIAQSVSYEVFLSTCLFCPLILTGSYDLIE----SRCSPFSSVFIGFEVL 177 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E + PFD E E EL G + E+ G F ++ + + +F Sbjct: 178 VLWVICILAETNRPPFDFVEGESELVAGYMVEFGGVNFALLALAEYSNMAFMSMLSGVLF 237 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +F+ LL ++ +V + + + R R D+ + W L Sbjct: 238 F------SFSMNLPLLGNLLFSFYMVFFMYFMIWVRGLVPRFRYDLLMELCWKVLLPLTL 291 Query: 300 AFVSLLAA 307 + ++ Sbjct: 292 CVFMVFSS 299 >UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA02_NAUPA Length = 319 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 12/289 (4%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG-WVFRLT 67 L A+ + + R+ ARL R GP + Q + D++KL ++ + P + VF+ Sbjct: 13 GGLFALALGIFMLSLERIVVARLQGRVGPPIYQNFIDVVKLFNKEILIPKDAKESVFKYA 72 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 P + ML + +P+ V DLI L+Y+ A+ + G + SP+ AI Sbjct: 73 PLIGFAGMLAMLYFIPIPGVYEGSGVNSDLILLIYVMALPAIAHILGGGASSSPYAAIAV 132 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGS----TNISNITDTVY-HWPLSQSIPLVLALCAC 182 +RE L ++ E + ++ + A G ++ I H A+ A Sbjct: 133 NRELKLMLVYEMVFVIIAFSIALYVGHGDAVFSLKKIMQYQQTHGSFLLDWKFWPAVIAF 192 Query: 183 AFATFIEMGKLPFDLAEA-EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 + PF +A + ++ +G L E+S + + +LK +++ +F F P Sbjct: 193 VIFVLATLELPPFQIAHHNDADVMDGFLIEHSSIPLAIYEMTDALKIVLLSIVFQIFFFP 252 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 A +L L+ I K VV V+ +L + R+D + Sbjct: 253 -----VVIADDAMLNLLWFIAKTVVFVMFFSLIHAILPSYRIDQAFKFL 296 >UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=Crassostrea RepID=Q9T7K1_CRAGI Length = 340 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 109/308 (35%), Gaps = 18/308 (5%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD 58 I VL +VA + + R + L R GP G+ Q D +KL ++ V P Sbjct: 38 IIFIYLGVLVSVA-YFTLMERKCLSSLGIRLGPDKISFAGLAQPISDGMKLFTKEFVAPS 96 Query: 59 ASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 S + F L P V + + P + + D++ L + ++ +SG Sbjct: 97 NSAKLGFFLIPCVAMLLCFLGWQIYPCSSTSPSM--GNDILFFLVVSSVNAHVAIMSGWT 154 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 + S + ++G R + E L + L +GS + +++D+ W + + Sbjct: 155 SSSKYASVGGVRGFAQVISYEICLSITLVAVMFFSGSMSFFSLSDS--GWSMWWGLYCAP 212 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 E + PFDL EAE EL G +E+S F + L++ + V Sbjct: 213 VAALWVVICLAEANRAPFDLVEAESELVSGFNTEFSAGSFAGLFIAEYGMILLMCLVTVW 272 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F T +L V K+++ S R R D W Sbjct: 273 SFF------QNTCVWTVLGSVWMFTKILMFTFFFIWTRASFPRFRYDQLMMAAWKTLLPF 326 Query: 298 FLAFVSLL 305 L + Sbjct: 327 VLGIYCVF 334 >UniRef50_Q5W905 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Lingula anatina RepID=Q5W905_LINUN Length = 318 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 108/306 (35%), Gaps = 16/306 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQSV- 55 LY + L + S R + + R+ PG+ LQ D +KL + + Sbjct: 14 YLYMFSFQVNLLVIIAFYSLSERAILSLVAGRQSPGIVGLRGVLQPMADGMKLYMKDMIR 73 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 ++ + L P V +G+ + P S + L +++ I+G Sbjct: 74 LAQSNHLAYVLCPSVSLGLSFAAWSVFPFWGTYSL---EVSALLFLCFISLSAIPIMIAG 130 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ + + R + E +L L L S +S++ ++ + P Sbjct: 131 WASNSKYSLMASVRSLAQAISYEVVLGLLLVFPLLFTHSLEMSSVAAPTQSIWVALAFPP 190 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + E + PFDL EAE EL G EYSG F + L+ + Sbjct: 191 LFGMWLACI--LAETNRSPFDLVEAESELVSGYNVEYSGLHFALFFMSEYSNMLLFSVVT 248 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +++ + F L + K + I R+R D ++ W G Sbjct: 249 TSLYL----NDGFLFTNPALQEAYFMTKAFFVSIFILFCRAVFPRIRFDQLMKMMWLGSL 304 Query: 296 FAFLAF 301 L+F Sbjct: 305 PLTLSF 310 >UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Schlettererius cinctipes RepID=C4NCG7_9HYME Length = 318 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 126/308 (40%), Gaps = 22/308 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + ++ VL +VA L+ + R + + NR+GP G Q + D IKL +++ Sbjct: 10 MFLSLMMVLIGVLLSVA-YLTLLERKLLSYMQNRKGPNKVGIIGFFQPFSDAIKLFSKEN 68 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + +++ ++P ++ +ML + +P++ + + +I ++ ++ + + Sbjct: 69 FELEKVNMYLYFISPIFLMLLMLMMWILIPMII--NLMMFDMGIIIMICFMSMTVYGLMM 126 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S ++ +G+ R V E +++ + V + GS + + + LS Sbjct: 127 CGWSSNSIYSILGSIRSIAQTVSYEVSMIIMMLVIVLMVGSFDFYELLKYQKN--LSFMF 184 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + + IE+ + PFDL+E E EL G +EY F ++ L + Sbjct: 185 FFFMLMLMFMVMMLIELNRSPFDLSEGESELVSGFNTEYMSGMFALIFLSEYGMILFMGM 244 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 M GGL+ ++ I+ V+ + S R+R D +W Sbjct: 245 ----------LMMMMFWGGLIYYSMMFIIFYFFMVIFVIWSRASFPRIRYDQLMFFSWFN 294 Query: 294 FGFAFLAF 301 + L Sbjct: 295 MLPSTLNL 302 >UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsilonproteobacteria RepID=B9L624_NAUPA Length = 323 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 21/317 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L L A + R A +H R GP G LQ D+ KLL ++S+ Sbjct: 9 YILVFPGLLFLLAWTFFVFYFARKTLAYIHKRVGPHFNGPAGTLQTIFDVFKLLTKESIT 68 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGD----LITLLYLFAIARFFF 111 P A ++F + P + V +P + + + D ++ L+ L + F Sbjct: 69 PKSADPYLFNIIPIITPLVAALPVILIPWTPLINNGHGILDTQYGVLGLVVLIGVEPFLL 128 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ 171 ++G + + ++ +G R + +E L A + G+ N+ I Sbjct: 129 FLTGFGSNNKYSFLGGMRILAQMLSMEAPFFLAALAPALLFGTMNLYEI---QSQNTWLT 185 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 ++ L+ A + + PF + +AEQE+ G +EY+G+ + ++K+ + LVV Sbjct: 186 TLILLPGAVIFIIAMLGILEQPPFHIPDAEQEIVYGFYTEYAGTNYVLLKFAEFTEMLVV 245 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 V +F + F + +K+ + +V+ S RLRLD + W Sbjct: 246 SAAAVVLFFGGYRGLFFD------SFWWLFLKIALLAVVMVAIRASNPRLRLDQMLKFCW 299 Query: 292 AGF-GFAFLAFVSLLAA 307 + A L V ++ A Sbjct: 300 SWLTPLAILNLVWIIFA 316 >UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Bacteria RepID=B9MR80_ANATD Length = 286 Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 34/303 (11%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 L L ++ + LL+GI R AR+ NR GP +LQ + D+ KL ++++ + + Sbjct: 5 LIVLASVVLSPIIGGLLTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSNTQIL 64 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + V V + + + + + A + + T SP++ Sbjct: 65 YAFLFLVFNIVAVVMFLLKMDLLLILFILAF------------ATTALILGAMATNSPYS 112 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 IGA RE + + EP+L+ + V GS NI +I ++ L +P + A + Sbjct: 113 RIGAHRELISVLAYEPVLIAMIVAIYFVTGSFNIQDILK--HNSFLILDLPFI--FIAFS 168 Query: 184 FATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 + I+ K PFDL+ QEL +G +E++G G+++ G + +++L Sbjct: 169 YVLTIKFRKSPFDLSTSHHGHQELVKGITTEFAGPVLGLIELGHWYELVLLL-------- 220 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA-GFGFAFL 299 F + +AI +++ + + +N ARL I ++TW+ FGFA + Sbjct: 221 ------LFVWLFFAKNIFVAIAAILICYFLEIVIDNISARLTWKIMLQLTWSVAFGFALV 274 Query: 300 AFV 302 + Sbjct: 275 NLI 277 >UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Heteroconchia RepID=Q06SB9_9BIVA Length = 314 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 101/298 (33%), Gaps = 20/298 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L+ L L + R R+GP G+ Q D +KL+ + Sbjct: 12 LLFFLSVLLGGLISVAFFIVVERKGLGHFQLRQGPNKPSIKGIAQALADGVKLMLKGCFF 71 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P ++ ++F L P++M P S + + + L A+ + I G Sbjct: 72 PGNSEKYLFFLGPFLMFSFSYGFWLIFPCYH--SSIFYESSMAYYMCLVALGVYGVFICG 129 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E +L + +G ++++ T + Sbjct: 130 WSSNSSYALLGAMRALAQSISYEVVLGTLILCPCLYSGGLSVNSFLMTKGLYGGLS---- 185 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 V E + PFD E E EL G E+ G GF ++ L + Sbjct: 186 VEIFFLWMAVLLAETNRAPFDFVEGESELVAGFNVEFGGFGFALIALAEYGSILFSSVLT 245 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F + +L+ V+ V V + L + R R D +W G Sbjct: 246 GVLFFG-------SFFEGILSGVLISVWGVFLSYLFILVRATFPRFRYDKLMSFSWKG 296 >UniRef50_A6UVJ9 Hydrogenase, component C-formate hydrogenlyase subunit 4-like protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ9_META3 Length = 304 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 11/304 (3%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 + +I L+ ++APL G+ +A ++GP V +Y D+I+ L + V + WV Sbjct: 1 MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWV 60 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 FR P ++ + L P+ + D I ++YLFA++RFF +S L+T S F Sbjct: 61 FRFAPLIISSIYLLALLFFPIAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFE 120 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ--SIPLVLALCA 181 +GASREA + L E L + + ++ G+ ++ ++ +V L I ++++ Sbjct: 121 GMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGSVGAQTLWNQAGIFAIISIIV 180 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 +E + P D + EL E + + SG G+M+ G LK L + + Sbjct: 181 LFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL 240 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 P G L + I+ + V + + E+ R +L + F A Sbjct: 241 IFP------VDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALAT 294 Query: 299 LAFV 302 LA + Sbjct: 295 LALI 298 >UniRef50_B6WWH2 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH2_9DELT Length = 310 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 18/311 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + + Q + +APLL GI +A++ R G VLQ Y DI K L + V + Sbjct: 3 DLAFYCFQYALALLLAPLLPGIIARIKAKVAGRHGKPVLQLYFDIFKGLRKGEVISQVTT 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 VF L P V + +L LP+ + SPL GD + YL + RF ++ LDTGS Sbjct: 63 PVFTLGPVVGLATVLCALALLPLGGMASPLRFSGDFLLAAYLLGLGRFLTMLAALDTGSS 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN-------ITDTVYHWPLSQSIP 174 F +GASREA L EP+L L L V + + + + H L Sbjct: 123 FEGMGASREAAFSALSEPVLFLCLLTLVGVGSTLGMHDALSLSGMLGGRPAHEWLLGRAE 182 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVV 231 L+L +E ++P D EL E + ++SG +++G +LK Sbjct: 183 LLLVPVVFFVLLLVENSRIPVDDPTTHLELTMIHEVMILDHSGPSLSFIEYGAALKLWFF 242 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + G+ +P L + + + +++ + E+ MARLR+ P + Sbjct: 243 AALPAGILVP--------DLPLWQQSLCWLACIFAVAVLVGIVESVMARLRMQKVPVLLG 294 Query: 292 AGFGFAFLAFV 302 + LA + Sbjct: 295 GAAVLSALALI 305 >UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Thermoproteaceae RepID=A3MXU6_PYRCJ Length = 324 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 18/299 (6%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQ 53 ++++P I ++ F V + R AR+ R GP G LQ D+IKL+ + Sbjct: 12 ALIFPGIAGILGFLV--VAIWAERKLVARVQWRYGPLYVSKPLGGFLQPIADLIKLVFSE 69 Query: 54 SVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 V P + +F LTP ++ + V L + + + F Sbjct: 70 LVLPRHTNRHLFALTPLLLFVAEAVPVVFIAVAPGLVIFHHSYGLALAVVTWLLIPVFLV 129 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 FT IGA RE +L E LLL + + G+ + + + W + + Sbjct: 130 GMAWAEADKFTYIGAVREILLTAAYEVPLLLSVLAMFILYGTADPYAVVERQSLWGVLLN 189 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 LA A + + + PF++ EAE E+ GP +EY + F + +K + Sbjct: 190 ---PLAFLAFYISLAMSTTRFPFEIPEAEPEVVLGPYTEYGSTLFILSFGANYVKMYAGV 246 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + +F+ G LLL + +VK + + + L R R+D R+ W Sbjct: 247 LLGAVLFLGGWSP----FGDLLLGALAVVVKAALLTVPLLLLRAIYPRYRIDQALRLGW 301 >UniRef50_Q21TB7 NAD-dependent dehydrogenase subunit n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB7_RHOFD Length = 308 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 9/305 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+ L + L++ ++ +L G+ ++ R+GP +LQ D+ +LLG++ + + Sbjct: 1 MNTLLTVTHGLLVLSLPIVLVGLVNRTKSWWAGRKGPRLLQSASDLRRLLGKRPIISTVA 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +FR + YV++ L A+ +P++ +P+ D + + Y +AR IS +D GS Sbjct: 61 SPLFRSSAYVVLICGLAAASMVPMLGQFAPVQFSHDFVVVAYTLGLARIALMISAMDVGS 120 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F +GA+REA EP L L + A G T+ +++ ++ P I + + Sbjct: 121 AFEGMGAAREASFSTYAEPALFLLIGAAGAATGMTSFADLIGQLHKTPYFPVI-VFPLVV 179 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A E ++P D EL E + ++SG M++ +LK + + Sbjct: 180 ALLILLQTEAARVPVDDPLTHLELTMIHEVMILDHSGPELAAMQYAAALKMTLYAGLIAA 239 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 + P + + A A+ +++ +++ L++ E+ ARL + R G G A Sbjct: 240 LINPMDPLASPMA-----AIGVSLGLMLLVALLVGCIESLTARLPMRWVTRYVLIGSGAA 294 Query: 298 FLAFV 302 ++ V Sbjct: 295 IVSMV 299 >UniRef50_P48897 NADH-ubiquinone oxidoreductase chain 1 n=38 Tax=Pulmonata RepID=NU1M_ALBCO Length = 299 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 111/301 (36%), Gaps = 26/301 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M V L+ L + + + R + + R+GP G++Q D +KL ++ Sbjct: 1 MVVFKSLLLNLCILLSVAFYTLLERKVLSSMQIRKGPNKVGLYGIIQPIADALKLFLKEF 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P +++ ++F + P + + + L + P + + + L L+ + L + Sbjct: 61 FIPVNSNSFMFMILPLLGLTLSLMLWAVFPSMWMFNFHSYL--LMLFVALTGTFVYVIIF 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S ++ +G R A + E +LL L+ A + + + I Sbjct: 119 AGWSSNSKYSFLGGMRAAAQTISYEVSMLLLLFFAVLMYRTYSWYE-----AGLSSPIGI 173 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + + + + E + PFD AE E EL G EY G F ++ L + Sbjct: 174 IIFIIMFIWFASCLAETNRAPFDFAEGESELVSGFNIEYYGGMFALLFLAEYSSILFMCM 233 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 M F+ + T LL+A+ R R D+ + W Sbjct: 234 MSTVWFLYSDMIFIMTLLILLIAMAFLFA------------RGVYPRHRYDLLMNLCWKS 281 Query: 294 F 294 F Sbjct: 282 F 282 >UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina RepID=Q46G56_METBF Length = 287 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 33/307 (10%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +L ++ + + L SGI R ARL R GP +LQ Y D+ KLL + ++ + S Sbjct: 3 DILTIILVLIGAPIIGCLASGIDRKITARLQGRVGPPLLQPYYDVKKLLSKDNMVVNPSQ 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 + + + + L + D + +++++ +A + G+ TGSP Sbjct: 63 NFYVVVYLAFIILSLFMLVF------------KQDFLMIIFVYTVASVALVVGGMSTGSP 110 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + IG+SRE M + EP+L+L + G+ +S + D PL PL+ A Sbjct: 111 YARIGSSREIMAILSYEPVLILYALAIYLLTGTFKLSALLDA--SSPLLMYTPLI--FIA 166 Query: 182 CAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 I++ K PFD + QEL +G +EY G GF ++ + + + + + Sbjct: 167 MIVVLNIKLKKSPFDYSTSHHGHQELIKGMTTEYGGPGFATIEIAHFYEYVFLTGL---I 223 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 F+ W VI ++ ++ L++ + +N AR+ +++W Sbjct: 224 FLFWASTP-----------VIGVLIGIIAYLLVIVIDNITARVYWQWMLKLSWTILLVIS 272 Query: 299 LAFVSLL 305 L ++ L Sbjct: 273 LVNIAYL 279 >UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Araneae RepID=Q6JT33_9ARAC Length = 304 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 113/306 (36%), Gaps = 22/306 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L I +++ + + R + R+GP G+ Q + D +KL G++ Sbjct: 1 MLKNFILLIMVLVGVAFFTLMERKVLGYIQCRKGPNKVGVLGIFQPFSDAVKLFGKEFYF 60 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + S ++ V++ + + L + G + G L + + F + G Sbjct: 61 LETSNMIYFYLGPVLMIPLSLLLWILLPYSDGVLDLKYGILFFFIC-SGMGIFSLMLVGW 119 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S F+ +G+ R + E + + ++ S + +I +Y L + + Sbjct: 120 GSNSKFSLLGSYRGVAQMISYEVSFMFIILGLLMISNSYLLIDIL--IYQEILWFFLGNL 177 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + L E+ + PFD AE E EL G E+ G GF ++ +++ + Sbjct: 178 ILLTMWLIVCMAELNRTPFDFAEGESELVSGFNVEFMGGGFAIIFMSEYSSIMMISTFSI 237 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F ++ ++ ++ ++++ S R R D + W Sbjct: 238 IMFFGSFELN-------------FMILSLLLMVLVLWVRGSFPRFRYDKLMLLAWKFMLS 284 Query: 297 AFLAFV 302 L + Sbjct: 285 GCLVVL 290 >UniRef50_A7HGW5 Respiratory-chain NADH dehydrogenase, subunit 1 n=8 Tax=Deltaproteobacteria RepID=A7HGW5_ANADF Length = 303 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 11/288 (3%) Query: 22 GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATA 81 G+ ++ R GP +LQ Y D+ KLL + +V + WVFR P V + + + Sbjct: 22 GVVNRTKSIFAGRAGPPLLQPYFDLAKLLRKGAVYSRTTTWVFRAGPIVGLAAVASAGLL 81 Query: 82 LPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPML 141 L + + L GD + YL +ARFF A++ LDTGS F +GA+RE L EP L Sbjct: 82 LSMGGAPAALSFAGDFVLFAYLLGLARFFTALAALDTGSAFEGMGAAREVTFASLAEPAL 141 Query: 142 LLGLWVAAQVAGSTNISNITDTVYHWPLS-QSIPLVLALCACAFATFIEMGKLPFDLAEA 200 L L V A+ G+ ++S + + L+LA + E ++P D Sbjct: 142 FLCLLVLARATGTLSLSGMLGPALPGAWGTAAPALLLAAISLFVIALAENSRIPVDDPNT 201 Query: 201 EQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLAL 257 EL E + ++ G + +G +LK + + + + G G L A Sbjct: 202 HLELTMIHEVMVLDHGGPDLAFILYGAALKLFLFGAILSRLVLGRG-------DGALAAE 254 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 + + + V + + + E+ MARLR+ P++ + A V LL Sbjct: 255 ALFFLGVAVFAVAVGVVESVMARLRIVRVPQLLVGASVLSVFALVLLL 302 >UniRef50_B1ZSE0 Respiratory-chain NADH dehydrogenase, subunit 1 n=6 Tax=Bacteria RepID=B1ZSE0_OPITP Length = 349 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 16/297 (5%) Query: 1 MSVLYPLIQALVL-FAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDA 59 M + + LI L L +APL+ GI +A + RRGP VLQ Y D+ +L + V Sbjct: 1 MRLAFDLIFRLALWLLIAPLIPGIINKVKAWVAGRRGPPVLQLYYDLGRLWQKGVVLSTV 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 P + + A LPV ++ S + GD +YL A+ARF + LDTG Sbjct: 61 VSPGHVTGPAIAWVALAGAAMLLPVGSLWSTVVFRGDAFLFIYLLALARFCTVSAALDTG 120 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S F +GA+RE V+ E L+ GL A+ +GS ++ + S L Sbjct: 121 SAFEGMGAAREVSYAVIAEAALIAGLLALARQSGSLALAEMLAP------SAGAGAALLG 174 Query: 180 CACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 E ++PFD EL E + ++SG + G +LK L+ + Sbjct: 175 AGLFTVLLAENSRVPFDDPNTHLELTMVHEAMVLDHSGPPLAAILHGAALKLLIFSVLLA 234 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +P G++ A L A V+A + + L E+ MAR P + G Sbjct: 235 EAVLPIGKLPPLAAFAALGAAVLA------IAVAVGLVESLMARAAFKRVPLLLTTG 285 >UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Unionidae RepID=D2DVZ7_9BIVA Length = 303 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 114/313 (36%), Gaps = 30/313 (9%) Query: 2 SVLYPLIQALVLFAVA-PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-Q 53 ++ L+ ++ +A L+ + R + A + R+GP G+ Q D +KLL + Sbjct: 3 TIATQLLPTILFSIIAMAFLTLLERKSLALMQLRKGPNKLSLMGLTQPMADALKLLTKAN 62 Query: 54 SVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ + L P + + + + P S + L+ + + A A + + Sbjct: 63 TTTSVSNTPMVNLIPTGALALSMLMWYLYP--ATHSTTHKTLGLLLFISISATAMYTIIL 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S + +GA R + E L+L + + ++ + ++S + + Sbjct: 121 AGWSVNSKYALLGAMRAMAQAISYEIPLILAMIFYSLLSNTLDLSAFCEKSHLTFKWSLT 180 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E ++PFD E E EL G EYS F L L + Sbjct: 181 --MPMTLVWFTVILAETHRMPFDFVEGESELVSGFNVEYSSVKFIAFFMSEYLNILFISL 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + + + + + + + +M R R D+ I W Sbjct: 239 LSSTLVMGSMYTAP------------------LVIWLFLMARGTMPRHRYDLMMTIMWKS 280 Query: 294 FGFAFLAFVSLLA 306 L+F++L+A Sbjct: 281 LIPITLSFITLVA 293 >UniRef50_C5CEV6 Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV6_KOSOT Length = 303 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 14/310 (4%) Query: 1 MSVLYPLIQALVLFA--VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD 58 M V Y ++ +LF ++ + R A +R GP Q + D+ KL G++S+ P+ Sbjct: 1 MIVFYTIVFPGILFTGFAGLIIWWLERKLSALFQHRVGPPWYQNFLDVFKLFGKESIVPE 60 Query: 59 -ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ V+ L P V + T++T L V + GD+I ++YL + + Sbjct: 61 LSASVVYVLAPIVSFSTVTTLSTVLGCA-VFLGIRIAGDVILIIYLLILCSMATFLGAAA 119 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 + + + IGASRE + + E +L++ + V +G N+ +Y P SI V+ Sbjct: 120 SRNVYAGIGASRELKMLLADELVLIMVILVPVVKSGFD--FNLLRLIYGSPAITSISGVI 177 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A ++ PFDL EAE EL G EYSG G+ K +K LVV + Sbjct: 178 AYILGLVCIQAKLAIQPFDLPEAETELAGGVEIEYSGVLLGLWKLSKGMKFLVVPLLLSV 237 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F Q ++ + + ++ L++ + +N R+ ++ W A Sbjct: 238 LFFGVPQ------EISIVRYLWIVAFYLITFLIVVVVKNINPRVTIEKMLGFFWKK--LA 289 Query: 298 FLAFVSLLAA 307 +AF++LL A Sbjct: 290 PMAFIALLIA 299 >UniRef50_P48901 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Saccharomycetales RepID=NU1M_PICCA Length = 351 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 113/322 (35%), Gaps = 33/322 (10%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQS 54 ++++ ++ + + L+ R + R GP + L D +KLL ++ Sbjct: 4 LNIVEMIVLFIFILLSVAYLTVAERKTLGYMQRRVGPNIVGYYGQLMAIADALKLLLKEI 63 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ + ++P + + L +P + L+ +L + +I F + Sbjct: 64 IIVRESDKILIIISPIIALCFALLSWAVIPFSPGIAIGDMNYSLLYILVIGSIGVFGTLL 123 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S FT + + R + E +L + + + + N+++ D + + Sbjct: 124 VGWSSNSKFTLLASIRSTAQLISYELILTTNIIICILLNNTLNLNSFIDNQQT--IWLIL 181 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ A E + PFD EAE EL G ++E S S F + +++ Sbjct: 182 PLLPIGIIHYIARIAETSRPPFDNVEAESELVSGHMTELSASPFVLFYLQEYNNIVIMCF 241 Query: 234 MFVGVFIPWG-QMETFTAGGLLLALVIAI-----------------------VKLVVGVL 269 + + +F F G L I K ++ Sbjct: 242 LNIILFFGGYLFWLPFIDNGSNLINFIINYFNINNFNFIYIIEIIFYVINISFKSIILTY 301 Query: 270 VIALFENSMARLRLDITPRITW 291 S RLR D+ + W Sbjct: 302 GFIWVRASFPRLRYDLLVNLCW 323 >UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E58B Length = 351 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 25/315 (7%) Query: 1 MSVLYPLIQALVLFAVAPL-LSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 ++ L I +V ++ + L I R AR+ R GP G+LQ D+ KLLG++ Sbjct: 22 LAYLIQTIVVIVFVGISFVALIYIFRKYMARIQRRVGPNRVGKFGLLQLIADLFKLLGKE 81 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVG-----SPLPQLGDLITLLYLFAIA 107 S+ P ++L P +++ + LP + + LI + L +I Sbjct: 82 SIMPAKRDDLAYKLAPAIVIIGTILAFILLPYGDLAYFGSIAVTHSRVTLILMFGLLSIL 141 Query: 108 RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS--------N 159 ++G+ T S + +G R + E +++ + + + ++ + Sbjct: 142 PIGEILAGISTKSNYALLGTMRGVAKDISFEIPMMISVLAIVMITSRSYVTGTAITGGLS 201 Query: 160 ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 ++ V + + I L L + PFD+ E++ EL G +EYSG FG+ Sbjct: 202 LSGIVSNEVIPYGIIEPLGLLIFYISMVARASMSPFDMGESDSELISGYTTEYSGMRFGL 261 Query: 220 MKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMA 279 G+ + + +++ + + ++K V+ VL+ + ++ Sbjct: 262 FYVGLFGMVYLTSFIISILYLGGANGPYESY----VGFFYLLIKTVILVLIAFVVWVTLP 317 Query: 280 RLRLDITPRITWAGF 294 R+R+D + W Sbjct: 318 RIRIDRFVNLGWKYL 332 >UniRef50_C3RYN6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Embryophyta RepID=C3RYN6_9EMBR Length = 328 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 111/316 (35%), Gaps = 11/316 (3%) Query: 1 MSVLYPLIQALVLFAVA-PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 + +L ++ ++ + LL A + R+G G LQ D +KL+ ++ Sbjct: 6 IGILAKILGIVIPPLLGVALLVSAECKVTASMQRRKGLNVVGLFGSLQPLADGLKLMIKE 65 Query: 54 SVGPDASG-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 + P ++ ++ + P + +P ++ L + ++ + Sbjct: 66 LILPSSANLFISIMAPVITFMSSSVAWAVIPFDYGMVLSDSNVGILHLFAISSLGVYGII 125 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 G + + + GASR A VL E + + + G N+S I + Sbjct: 126 TVGRVSNPKYASSGASRSAAQTVLYEVSIGPIIITVSIRVGPRNLSEIVMAQKQ--IWFG 183 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 IPL L + E + D EAE E G EY GF G +++ Sbjct: 184 IPLFPVLIMFFISRLAETNRAFSDPPEAEAESVAGYNVEYPLMGFAPPSLGEYANMILMS 243 Query: 233 QM-FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 + + W + F + + +K++ + + R R D + R+ W Sbjct: 244 SLCTLPSLGGWPPIPDFPIFEAISGSIWFSIKVLFFPPIHIRVRAAFPRYRYDQSMRLGW 303 Query: 292 AGFGFAFLAFVSLLAA 307 F LA V ++ Sbjct: 304 KVFLPLSLARVVFVSG 319 >UniRef50_A8MB61 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB61_CALMQ Length = 361 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 109/302 (36%), Gaps = 9/302 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSV 55 ++ + + LF + R A AR+ R GP GV+Q D+I+ ++ + Sbjct: 41 VWFVPGLIGLFIPLIFVIWWERKAAARVQWRYGPLEISRRIGGVIQPISDLIRYTLQEII 100 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 +A F P L LP + +++ L +I +S Sbjct: 101 IHQEADEAYFLHMPVFGFIFALLPVLFLPAGPHVYAINTGYNILIAAVLISIFNIVIIVS 160 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + + IG REA + E +L + + G+ + + + + +I Sbjct: 161 GWASTDKWAYIGTVREAFMYAAYEVPFMLSVIAMIILFGTADPFAMVNAQVAHYIPGAIL 220 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 +A T + + PF + E + +L GP +EY G FG+ K V+ + Sbjct: 221 NPIAFIVAFITTAMASSRFPFTIVENDTDLVVGPFTEYGGLIFGLTMTMSYEKTYVMTLL 280 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ G L A + V++ + ++ + RLD RI W Sbjct: 281 LSILFLGGWSGPYIGPLGDLSAPLWLGVRVFLVMMFFSFLRAVYPSYRLDQALRIGWRTL 340 Query: 295 GF 296 Sbjct: 341 LI 342 >UniRef50_A6Q2X3 Ni-Fe hydrogenase, membrane subunit HycD/HyfD n=3 Tax=Epsilonproteobacteria RepID=A6Q2X3_NITSB Length = 306 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 9/304 (2%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 LI L APL + + L ++ +LQ Y+D KL+ ++ + + + + Sbjct: 5 LIFVATLIVTAPLFLTFMKAVKMWLLYKKPVSLLQGYKDFSKLIAKEVIISKEASSITSI 64 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 PY+++ ++ + LPV + S D T+ L ++ FF + GLD+ S F IG Sbjct: 65 APYMVLAPLVLVLFFLPVPSSNSYYVGFVDAFTITGLITLSTFFLMLLGLDSASSFGGIG 124 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN-ITDTVYHWPLSQSIPLVLALCACAFA 185 +SREA + LVEP ++L ++ + +A ++ + H+P+ A A Sbjct: 125 SSREAFISALVEPAMVLVIFSLSLIAKDLGVAKAALNLNNHFPIKHLASFTFAAIAFFIL 184 Query: 186 TFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 E G++P D E EL E + + SG +++ SLK ++ +FV F+P+ Sbjct: 185 LLAENGRIPVDNPETHLELTMVHEAMILDISGFYLALIESASSLKFMIFATLFVSFFLPF 244 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G F L AL + ++K+ + +A E + A+LRL P + FAFL+ + Sbjct: 245 GANLPF-----LFALGLFLIKIAFVSVAVAFIEVNTAKLRLFKVPNLLGIAIIFAFLSLI 299 Query: 303 SLLA 306 S Sbjct: 300 SYYI 303 >UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sinergasilus polycolpus RepID=C1INF9_9MAXI Length = 307 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 106/301 (35%), Gaps = 22/301 (7%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDASGWVFR 65 + ++ + R R GP G LQ + D +KLL ++ +++ +F Sbjct: 17 VLVNVAFITLLERKILGYSQLRLGPNKVSLIGFLQPFADALKLLTKEYFTLFNSNILLFY 76 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 L+P + ++L + P+ + + + LL + + + + +SG + S + + Sbjct: 77 LSPALSFVIILMLWFMFPMGL--ASMSFKYSFLLLLMIMSFSVYPILLSGWSSNSKYAML 134 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G R + E L + S N+ + + + PL+L + Sbjct: 135 GGMRSVAQTISYEISFAFILMFLMIMNMSVNLELKMSSYLFSSVIFTFPLILVM--WLVV 192 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 E + PFD AE E EL G EY GF ++ + + V V Sbjct: 193 CLAESNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYASIYFLSALSVLVLF----- 247 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 L + V+ + V ++ R R D+ + W A L + Sbjct: 248 ------KLNSSSVLMWLVTTFFVFFWVWARTTLPRFRYDLLMSLAWKSILPASLLLLETA 301 Query: 306 A 306 + Sbjct: 302 S 302 >UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Desulfurococcaceae RepID=A3DMA3_STAMF Length = 330 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 21/301 (6%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW 62 L + + I R R+ RRGP G+LQ + D +KLL ++ V S Sbjct: 18 GLLFIIIMIIFTQWIYRKVTGRVQYRRGPTYVGPFGLLQPFADFMKLLLKEDVVSRYSA- 76 Query: 63 VFRLTPYVMVGVMLTIATALPVVT--VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 ++ P ++ + + TAL ++T P+ D+I YL GL T + Sbjct: 77 --KIAPVIVAALGVGAITALTLMTPLAYDPVHAPFDIIVFFYLALWTSLSIMFLGLATPN 134 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS---------NITDTVYHWPLSQ 171 P+T++G R L V EP + V +A + S I+ ++ + Sbjct: 135 PYTSLGVGRYMALLVSAEPAYVSSFLVPVIIASKIDPSIEYSLYGSSLISYQLWTSNVFS 194 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 I +++A A A + PFD EAE E+ G +EY G + + + +++V+ Sbjct: 195 FIAMLIAAIAGFLAMMGILEIKPFDFPEAEGEIYWGVFTEYGGPRLALAFFILFAERIVI 254 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 ++V +F+ G + L L++ K +V +++++ +N M R R W Sbjct: 255 PIIYVLLFLG-GSWPIDISTNYLGGLLVIFAKFIVVFILLSVIDNVMPRFTPAQGVRFLW 313 Query: 292 A 292 Sbjct: 314 K 314 >UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-like) n=2 Tax=Euryarchaeota RepID=Q0W6T3_UNCMA Length = 313 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 26/303 (8%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------------GVLQEYRDIIKLL 50 I + F V LL+ R AR+ +RRGP VLQ DI+KLL Sbjct: 4 LSWINPFIAFGVGILLAFNMRKVFARIQSRRGPLVWMPGAWHDINRTKVLQPLYDILKLL 63 Query: 51 GRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++++ P + F + P + + L + +PV G L+ + YL Sbjct: 64 SKKTILPATATPFFTIGPIIALVFALALTLFVPVA--GLAFDYSFSLVIIFYLLIGVTMC 121 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 I G + S F AIG RE L + E +LG + A + ++ + Sbjct: 122 IIIGGTASASLFAAIGGVREIELMLANEIPFILGTFALAITYDTLSVQGMMG-------P 174 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + A A A +++ PFD+AEA+ E+ G +EYSG GV++ L Sbjct: 175 NLLLNPFAAAAFFIAMLVKLHVRPFDIAEADSEIVGGLTTEYSGKLLGVLEITKVLMLFS 234 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + +FV +F+ + + + + + V + I + AR R+D + Sbjct: 235 LSALFVDLFL---WVPKGWTLPGVASWALFLAGAFVVSVAIGIVNALFARFRIDQATKWL 291 Query: 291 WAG 293 + Sbjct: 292 FTA 294 >UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobaceae RepID=A4YHY6_METS5 Length = 352 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 129/333 (38%), Gaps = 43/333 (12%) Query: 2 SVLYPLIQALVLFAVAPLLS--GITRVARARLHNRRGP--------GVLQEYRDIIKLLG 51 S P+I ++F LL+ R A AR+ R GP G LQ D +K + Sbjct: 15 SFFAPIILPGLIFTAILLLTTIWFERKAAARVQMRIGPYYASKRLGGYLQLVADALKFVF 74 Query: 52 RQSVGPDASGW-VFRLTPYVMVGVMLTIATALPV-----------------------VTV 87 + + P+ +F LTP ++V + +PV + V Sbjct: 75 SEVIVPEGVNPTLFALTPVLVVAMSFLPLAVIPVSVIPPSGSIFSIYFHDFYDPNVGLGV 134 Query: 88 GSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 L +++ +L + +I + T + F +GA RE+ L V + +LL+ Sbjct: 135 LVGLFTQYNMLLILAIESIYPAMIILMAWSTNNRFAIVGAVRESYLSVSYDVLLLMSTIS 194 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 A + ++ I T + + LA A I + PFD+AEA+ EL G Sbjct: 195 MALEYHTLDLVKIVQT----GVPGILANPLAAVTFFIAMIIGSARFPFDIAEADTELVLG 250 Query: 208 PLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVG 267 P +EYSG F + G + V +F +F+ WG G LL ++K + Sbjct: 251 PATEYSGLLFVLTMAGSYVGNFVYALVFTDMFL-WGWYPLSGFPGALLT----VIKASIL 305 Query: 268 VLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 V + R RLD R +W +A Sbjct: 306 VFFSVFLRSVYGRYRLDQALRGSWKYIFPLAIA 338 >UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Trichinella spiralis RepID=Q9B8A1_TRISP Length = 299 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 104/291 (35%), Gaps = 28/291 (9%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVF-RLTPYVM 71 ++ + R R GP G++Q D +KL + + + F L P + Sbjct: 21 FVTLMERQYIGISQRRLGPNKVSITGLMQPILDGLKLTLKSTKKTNKLNPTFYLLMPIMN 80 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + + LP++ +P+ +L+ + L I F +SG + S + G+ R Sbjct: 81 LTLFTLFWWGLPLLY--NPISFQVNLLFTITLMGIMSFGIVLSGWVSNSKYATYGSLRSM 138 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E L L + + S N++ Y++ + ++ L E Sbjct: 139 SQSISYEVCLSTTLLMIMMLKDSYNLATTKTGFYYFEPTITLALT---IPATIMILAETN 195 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFDLAEAE EL G E+S F + +++ +F + +PW Sbjct: 196 RSPFDLAEAESELVSGFNIEFSSVEFAFLFMAEYGMIILLSTLFSTLLLPWCSPLLTLLL 255 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 + + ++ R+R D + W ++ + Sbjct: 256 ISSIIMS----------------RSTFPRIRYDTLMSLMWKSLLPVMISML 290 >UniRef50_Q2WGD5 NADH dehydrogenase subunit 1 n=2 Tax=Tracheophyta RepID=Q2WGD5_SELUN Length = 331 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 103/304 (33%), Gaps = 31/304 (10%) Query: 17 APLLSGITRVARARLHNRRGPG------VLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPY 69 AP+ + + R A + R GPG ++Q D +K L ++ + P W F + P Sbjct: 3 APVTARLERKISAGIQQRIGPGYAGPLGIIQALADGVKPLFKEDIIPSKGDPWSFSIGPA 62 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 +++ + + +P + + + +IA ++G + + ++ G R Sbjct: 63 MVIAPVPVGHSVIPSGHSIVLADPGTGVPSRIAASSIAPLGPPMTGYGSNNKYSFSGGPR 122 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP--LVLALCACAFATF 187 A E L + + ++ S + + + + P + L A Sbjct: 123 AAAQSTSYEIPSALRVSPISLLSSSLSTVDTVEAQPKYGFWGWNPRRQPIGLVAFPIPPS 182 Query: 188 IEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET 247 E +LP DL EAE+E G +EY G+ G L F VF P G + Sbjct: 183 AERERLPSDLPEAEEESAAGHQTEYPGTKSGSSYVAPHPNPLASSS-FATVFHPGGWNDP 241 Query: 248 FTAGGLLLALV---------------------IAIVKLVVGVLVIALFENSMARLRLDIT 286 L +A+ K V + R+R+D Sbjct: 242 SIPPHPALGFGNPSSGMTDGAAEVISAAVGITVALAKAHSPSSVTITARRTSPRVRMDQP 301 Query: 287 PRIT 290 + Sbjct: 302 LDLG 305 >UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 n=12 Tax=Bacteria RepID=B1I3Q1_DESAP Length = 290 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 120/291 (41%), Gaps = 34/291 (11%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVM 75 V L G+ R AR+ R GP V Q++ D +KL G+ P+ + V+ ++ M Sbjct: 19 VGGFLRGVDRRITARMQGRIGPPVRQQFYDFLKLWGKAPSVPNKASVVWVWG--YLLLTM 76 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 +T+ L DL+ + ++ A A A SP+ IGA RE + + Sbjct: 77 VTVFM----------LFAGQDLLIIFFVLAFAAACLAFGAYSVRSPYAHIGAHRELLQML 126 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPF 195 EP+LLL + G+ +S + + + L LA A A I++ K PF Sbjct: 127 SYEPILLLAVVAIFLQTGTFMVSGVLEYDQ----PLLLTLPLAFAAVLIALGIKLRKSPF 182 Query: 196 DLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG 252 D++ A QEL G +EYSG V++ + +++L F A Sbjct: 183 DISASEHAHQELVRGVYTEYSGRTLAVIELAHWYELVLILA--------------FVALF 228 Query: 253 LLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA-GFGFAFLAFV 302 L + ++ + + + +N ARLR I+W G G L V Sbjct: 229 WAQPLWVGVLLALGAYFLEFVVDNIAARLRWTWMLSISWGIGVGLVLLNIV 279 >UniRef50_C4KGS6 Formate hydrogenlyase subunit 4 (HycD) n=13 Tax=Archaea RepID=C4KGS6_SULIK Length = 324 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 7/285 (2%) Query: 15 AVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGV 74 ++PL GI +A + R+GP VLQ Y DIIKLL +++V + S +F PY++ G+ Sbjct: 28 LLSPLYQGIYDRGKAIIEGRKGPSVLQPYYDIIKLLRKETVISNNSLSLFVYAPYIVFGI 87 Query: 75 MLTIATALPVV-TVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAML 133 L I+ +PVV V L D + LF++A F I+ L++GS F A+G SR Sbjct: 88 YLLISFVIPVVYPVPILLTPTVDFLGGALLFSLAAFIKIIASLESGSNFVALGVSRILSF 147 Query: 134 GVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS-IPLVLALCACAFATFIEMGK 192 L E L+ + A + G+ N D V + + + E GK Sbjct: 148 TFLSEATLITVFFGVALITGTNNPYVTLDYVSQSLSHYFQLDHIFVSISFFMLWLFETGK 207 Query: 193 LPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT 249 LP + E + +G L EYSG ++KWG +KQ ++ + + VFI + Sbjct: 208 LPVESP-GLSEMGMIDDGVLYEYSGKLLAILKWGSYIKQYLLGSVLLNVFI-FPWFLQVG 265 Query: 250 AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G L+ + + K ++ +L+ + ++A+LRL F Sbjct: 266 IIGSLIDIAVMFGKWLLLILISVIINTTLAKLRLFKVQDYLAVAF 310 >UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Eukaryota RepID=Q9ZY22_PEDMN Length = 310 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 26/295 (8%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVM 71 L I R A + RRGP G LQ D +KL+ + ++ ++ +P++ Sbjct: 28 FLVLIERKVIAYIQRRRGPVFVGFWGALQSIADGLKLILKTNLSVFGIEKSIYYASPFIS 87 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + L +P+ + L +L L +I + ++GL + S + +G R A Sbjct: 88 FFISLLSWVFIPLGFLLQDSDI--SLFFILALNSIGVYGILLAGLSSSSRWAFLGGLRSA 145 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E L + ++ G +I + + + PL+ + + E+ Sbjct: 146 AQIISYELSLNICIFSIILCVGGLSIIKVVSFQEN--ILLVFPLLPFILISFIISLAEIN 203 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + PFDL EAE EL G +Y F G +++ + +F Sbjct: 204 RAPFDLPEAEAELVAGYNVDYGAINFTFFFLGEYTHIVLISFIMAKLFF----------- 252 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 + I+ + + +I ++ R R D ++ W + + +L+ Sbjct: 253 ----GSLNTILIPIFFIFLIIQVRAALPRYRYDQLMKLGWKELLLISFSCMFILS 303 >UniRef50_C9V3N4 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Lucinidae RepID=C9V3N4_9BIVA Length = 312 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 118/305 (38%), Gaps = 23/305 (7%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-A 59 ++ L++ + + R R GP GV Q D +KL ++ + PD + Sbjct: 18 IVTFLLVMGGVAFFTLLERKFLGYFQLRLGPNKVGYKGVPQPIADAMKLFLKEFLLPDGS 77 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + + F P +M+ + + + PV S + L + + + + + G + Sbjct: 78 NKFAFVAGPALMLILCVGVWALYPV--YFSSIYFLWGFLLFICISSAGVYGVIAVGWSSN 135 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S ++ +G R + E ++++ + V S ++ + + W + P+ Sbjct: 136 SKYSYLGCVRAVAQFISYEVVMVMIVLVTMISVESFDMISFCTSGC-WGVFVYAPM---F 191 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 + E + PFD E + EL G EY G GF ++ L + + ++ Sbjct: 192 FMWLVSLLAETNRAPFDFVEGQSELVSGFNVEYGGVGFALIFIAEYSMILFMSMLTGVIY 251 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 GG+ + ++++ V +++ + L + R R D+ +TW L Sbjct: 252 F----------GGMSMGVLMSTVVVLLVSSFVVLCRGGLPRFRYDLLMMLTWKYLLPVVL 301 Query: 300 AFVSL 304 F+ + Sbjct: 302 VFLGV 306 >UniRef50_C8BPE3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Phrynosoma blainvillii RepID=C8BPE3_9SAUR Length = 322 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 7/197 (3%) Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + A + SG + S + IGA R + E L + L + G ++ + T Sbjct: 115 STAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLAVVILTGGFSLKTMLMTQ 174 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 L S + +T E + PFDL E E EL G EY+G F + Sbjct: 175 EQTWLLYSSW--PLMMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAE 232 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +++ + +F+ GQ L ++K ++ + S R R D Sbjct: 233 YANIMMMNTLSCILFLSPGQTTQPEMFSTNL-----MLKTMLLTIGFLWIRASYPRFRYD 287 Query: 285 ITPRITWAGFGFAFLAF 301 + W F LA Sbjct: 288 QLMHLLWKQFLPMTLAL 304 >UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bothriometopus macrocnemis RepID=A8VTY0_9NEOP Length = 309 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 114/313 (36%), Gaps = 28/313 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-- 52 M + + A+ + S R A + NR GP G+LQ + D +KL+ + Sbjct: 13 MESIQLIFLAVGVLLSVAFFSLFERKVLAIIQNRVGPDKVGIVGILQPFSDAMKLISKTE 72 Query: 53 QSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 G ++ +P +M + + P + ++ ++ + + Sbjct: 73 SPSPSKKVGVLYFFSPAIMFVISFIVWITFP--SNWEIYSFDKSMLFVIACMGSSVYGLV 130 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 ++G + S ++ IG+ R + + E +L+LGL + + G+ ++ I + Sbjct: 131 MTGWFSSSKYSLIGSVRAIGMSISYEIILVLGLVLMMFLLGTMSVKYIISFQEQ--MWLF 188 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 PL + E G+ PFDL+E E EL G EY G + ++ + + Sbjct: 189 FPLWFVFIILLISFLAESGRAPFDLSEGESELVSGYSVEYGGISYTLIFLSENSSIIFSS 248 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +F G + T + ++ ++ R+R D + W Sbjct: 249 VILSSMFFAMGSILTLPG----------------LIFLVVWIRGTVPRMRFDQLMMMCWV 292 Query: 293 GFGFAFLAFVSLL 305 L L+ Sbjct: 293 KILPIMLFIFGLV 305 >UniRef50_O99824 NADH-ubiquinone oxidoreductase chain 1 n=14 Tax=Arthropoda RepID=NU1M_RHISA Length = 313 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 118/309 (38%), Gaps = 25/309 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ +Y I L++ + + R H R+GP G+LQ D +KL ++ Sbjct: 3 LNFIYYFILILMVLLSIAFFTLMERKFLGYCHIRKGPNKTGAMGLLQPISDALKLFSKEM 62 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ ++P +M+ +M+ + + L +I L + ++A + Sbjct: 63 NKMFYMNKFIQIISPLIMILMMMMMWMI--FYFSNNALNLNMSIIFFLCISSLASYAILF 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG + S ++ IG+ R + E + + L A + S N + +PL Sbjct: 121 SGWSSNSKYSLIGSYRGFAQVISYEVSMAMILISLAIIPQSYNFISFLKIQETFPLI--F 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E+ ++PFDLAE E EL G EY F ++ +++ Sbjct: 179 SFLPIFIIWIITVLAELNRVPFDLAEGESELVSGFNIEYGSWLFAIIFMSEYGDIMMISF 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ + F +++ + +I + + R+R D + W Sbjct: 239 LTYYLFLGLKNLILFF--------------VLILMTMIIMIRGTYVRMRYDQLMMMAWKM 284 Query: 294 FGFAFLAFV 302 + F+ Sbjct: 285 ILPQSIIFL 293 >UniRef50_D0WEF6 Putative Ech hydrogenase, subunit EchA n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF6_9ACTN Length = 973 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 124/313 (39%), Gaps = 33/313 (10%) Query: 2 SVLYPLIQALVLFAVAP----LLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 +L LI + + P LL+G R+ AR+ R GP +LQ Y D+ KLL + V Sbjct: 683 DLLRTLIGTVAFAVLGPVVGCLLAGADRIVTARMQGRVGPPLLQPYYDVRKLLVKDDVAV 742 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ V+ + + G+ + +L ++ FF ++ Sbjct: 743 NSVEDVYVTCALIFALLSGGTFF------------GGGNFLMCAFLITLSALFFILAAYS 790 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 T SP+ IGA RE + + EP++L G+ +++ + + + Sbjct: 791 TRSPYAEIGADRETVQVMAYEPVILFMAVCMFLAIGTFDVAGVALYSR----PLIVVCIP 846 Query: 178 ALCACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 A F I++ K PFDL+ QE+ +G +E SG ++ + ++ L Sbjct: 847 VFLALMFVLTIKLRKSPFDLSYSHHGHQEIVKGITTEMSGRTLAKVEVMHWCESVLFLGW 906 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 VG+F WG ++ + + L+ +N+ AR++ + W Sbjct: 907 -VGMFFVWGNPVSYVLAVAV---------ALAAWLLEIFIDNNFARVKWQAMLKWAWIVG 956 Query: 295 GFAFLAFVSLLAA 307 G + ++ L A Sbjct: 957 GVLGIGNIAALCA 969 >UniRef50_B5U6L1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Damon diadema RepID=B5U6L1_9ARAC Length = 303 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 30/307 (9%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQSV- 55 ++ + + + L+ R + RRGPGV LQ + D + L+ V Sbjct: 7 LVEGFLLIVCVLIGVAFLTLFERKVLGYVQCRRGPGVVGAGGFLQPFADAVSLMISGYVG 66 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 +++ ++F L P + + + + P +I L ++ + ++G Sbjct: 67 VGNSNYFMFMLVPICGLFLAVVMWLVAPFKFGFIDFSYG--IIFFLVCSSLGVYIIMLAG 124 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +G+ R + E + L L + + S +Y + L + Sbjct: 125 WVSNSKYGLLGSYRAVAQTISYEVSMALILLLVVMLGEGYMFS-----LYEFILWPIVGW 179 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E+ + PFD AE E EL G E+SG F ++ L++ + Sbjct: 180 GFLVFMWVVTCVAELNRTPFDFAEGESELVSGFNVEFSGGEFALIFIAEYSNILLLSAVS 239 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V VF+ Q + K+++ ++V+ + R R D + W G Sbjct: 240 VWVFMGENQ----------------VFKVMMMMMVVVWLRGVLVRYRYDKIMMLVWKGLL 283 Query: 296 FAFLAFV 302 + + Sbjct: 284 PVVMGIL 290 >UniRef50_Q9B8G7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Heterodoxus macropus RepID=Q9B8G7_9NEOP Length = 297 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 114/311 (36%), Gaps = 27/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M +L I +++ + + R +H R+GP GVLQ D +KL+ + Sbjct: 2 MLILQHFILVIMMLLTVAFFTLLERKILGYIHFRKGPNKVLLKGVLQPIVDAMKLITKDD 61 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 ++ +++ ++P + + I LP+ + + + L L + + + Sbjct: 62 SPIIYSNIFLYYISPMFSFIMSMIIWMILPLQFI--IFNWVNSFLILFMLLGMGVYSMFL 119 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG + S + +G+ R + E ++ + +I I Sbjct: 120 SGWSSNSKYAYLGSLRAVSQSISYEILMSMLFIALMMTTKGMSIYYILK-----FDPLVF 174 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L A F E+ + PFDL+E E EL G EY G + ++ ++ + Sbjct: 175 FLFPFFIAYLFIGLAELNRSPFDLSEGESELVAGYTVEYGGIMYTMIFLSENIMIMFFCY 234 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 M F + ++I+ ++ + ++ L + R+R D W Sbjct: 235 MGSLFFF-------------YINSTMSIIFSMMMIYLVCLIRGILPRIRYDHLMMFCWKI 281 Query: 294 FGFAFLAFVSL 304 + FV+L Sbjct: 282 MLPLMVIFVNL 292 >UniRef50_B8J1E4 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Desulfovibrio RepID=B8J1E4_DESDA Length = 283 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 35/312 (11%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 +S+L + ++ V LL+G+ R ARL +R GP +LQ + D+ KL G+++ +A Sbjct: 2 LSILSAVGGLILSPLVGGLLTGVDRRLTARLQSRLGPPLLQPFYDVFKLFGKEASVTNA- 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+ ++ L + GDL+ L ++ + F + L S Sbjct: 61 -WLVFSAYMTLISSALALLIFF----------MGGDLLLLFFVLTVGAVFQVVGALCVPS 109 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 P++ +GA RE +L + EP+L+L A GS +I + V+ + + L Sbjct: 110 PYSNVGAQRELLLMLAYEPILILVFVGFAMCTGSFSI----EAVFAQDQPLLLKMPLLFL 165 Query: 181 ACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A +A I++ K PFD++ QEL +G +EYSG G+++ L +++L + Sbjct: 166 ALGYALTIKLRKSPFDISASHHGHQELVKGVQTEYSGPYLGIIELAHWLDLVLILGL--- 222 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP--RITWAGFG 295 A +++ + + L +N ARL + G G Sbjct: 223 -----------CAMFWHTSVIGMATLVAASLFTEILIDNITARLTWQWMVQKKSLLLGMG 271 Query: 296 FAFLAFVSLLAA 307 A + + L A Sbjct: 272 LALVNLLWLYVA 283 >UniRef50_C8YLY6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Apocrita RepID=C8YLY6_9HYME Length = 310 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 112/303 (36%), Gaps = 25/303 (8%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDA 59 L L++ L+ + R + +R+GP G++Q D +KLL ++ + + Sbjct: 15 LFLILMVLVSISFLTLLERKILGIVQDRKGPNKVSVGGIIQPMGDGVKLLSKEVMWIYKS 74 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + + + +P + +ML P + S L D + +L + ++ + ++G Sbjct: 75 NFYYYFFSPCMSFIIMLLCWLIYPYLY--SYLNSNLDFLLILMVLSLGVYGIMLAGWSAN 132 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S ++ G+ R + E L+ + + S + + + + L + Sbjct: 133 SMYSMFGSIRAISQTISYEVTLVFLMVYQFFFSCSVSFKKLMEFQNGFMFMFY--LFIVF 190 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E+ + PFDL E E EL G EY S F ++ L + MF+ ++ Sbjct: 191 LMVFIVMLAELNRTPFDLVEGESELVSGFNVEYISSTFALIFLAEYGMILFMGMMFMIMY 250 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 + L++ V +I L + R+R D + W + Sbjct: 251 FGCSSLGWVG--------------LILFVYLIILLRGVLPRVRYDSLMFMGWKSVLPVSM 296 Query: 300 AFV 302 + Sbjct: 297 NLL 299 >UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L8T9_NAUPA Length = 279 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 16/227 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+ + LI L + + G+ R+ +AR+ +R GP ++Q + D KL+ ++ + + Sbjct: 1 MNQTFMLILTLFAPIIGGFVYGVERIVKARMQSRVGPPLMQPFYDFFKLMDKRPMMVHS- 59 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 + ++ I + L DL+ ++ IA I S Sbjct: 60 -----------LHAVMGIMYFVASWFALLVLFMGNDLLVAVFFHVIAVLALTIGAFSVRS 108 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 P++ IGA RE M + EP+++L + QV GS N+ +I + + L + Sbjct: 109 PYSVIGAMRELMHMISYEPLMVLMVVGFYQVVGSFNLKDIL----SYEGIPLLQLPVVFV 164 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 A A + + K PFD+AEA QE+ GP EYSG + + G ++ Sbjct: 165 AFVLAIPMMLHKSPFDVAEAHQEIVGGPEIEYSGPFYEAVYTGKWIE 211 >UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Paracyclopina nana RepID=C0J6S5_9MAXI Length = 304 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 101/289 (34%), Gaps = 24/289 (8%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-QSVGPDASGWVFR 65 L+ + R R GP GVLQ + D +KLL + +A+ +++ Sbjct: 18 FLVSVAFLTLLERKILGFSQIRIGPFKVGVWGVLQPFADAVKLLAKTSEANSNANKFLYF 77 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 P M+ + L + +P + +G+ I + + +++ + +SG + S + + Sbjct: 78 SAPVFMLSITLMLLNLVPCLELGNKWSLG--FIFFIVILSLSVYPLLLSGWASNSKYAVM 135 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G+ R + E L + + + S N+ I+ L Sbjct: 136 GSVRGVAQTISFEISLAIIFMIMIILFLSMNLFFISVIKVSVVFVSP----LLGLIWFII 191 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 IE + PFD AE E EL G EYS F ++ ++ Sbjct: 192 LVIETNRTPFDFAEGESELVSGFNIEYSSISFVLIFLAEYGSIMMFSIF----------- 240 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + G L ++ + + + ++ R R D+ W F Sbjct: 241 SSLVLLGTPLFSFNSVCMAICFSGLWIILRSTFPRYRYDLLMSTAWKSF 289 >UniRef50_Q68RK6 NADH-ubiquinone oxidoreductase chain 1 n=54 Tax=Bilateria RepID=Q68RK6_DIUNO Length = 315 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 111/298 (37%), Gaps = 22/298 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 S L L L++F + + R + R+GP G LQ D +KL ++ Sbjct: 10 SYLIFLFLFLMVFMSVAFFTLLERKVLGYIQLRKGPNKFFLKGALQPMGDGLKLFFKEVN 69 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + +F ++P + + + + P + + + LI + ++ + F + Sbjct: 70 YPSNMNFFIFMISPMLGLLISIFFWFIYPYIGMNYIMGFG--LIYMFCCSSLMVYIFLMV 127 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 + S ++ +G R + E +++ + + S N+++ +Y Sbjct: 128 SWSSNSNYSVLGMIRFISQMISYEVSMMIIIMNLMFLINSFNLNDF--YIYQMNSKFFFF 185 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L L + EM + PFD +E E EL G E+S F + + + + + Sbjct: 186 LFLIFILLLISFMAEMNRSPFDFSEGESELVSGFNIEFSSMSFIFIFMSEYMSIMFMGML 245 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 +F GL++ + +++ + ++ + R R D + W Sbjct: 246 LCEMFF-----------GLMMNKFYLNIFILIFMFMVIWLRGFLPRFRYDKLMYLIWK 292 >UniRef50_Q85UH6 NADH-ubiquinone oxidoreductase chain 1 n=18 Tax=Coelomata RepID=Q85UH6_CIOSA Length = 344 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 116/313 (37%), Gaps = 25/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ- 53 + +++ I L L + LL + R R+GP G++Q D KL+ ++ Sbjct: 3 LVIVFYFIFILFLLLMVALLVLLERKVLGLAQIRKGPNIVGIYGLMQTILDGGKLILKKL 62 Query: 54 SVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V + + F L+P + + L +P + ++ L + ++ + Sbjct: 63 MVLFNIRKFFFLLSPILGFVLSLMNWFFIPTPFI--LFHSEYGILLTLVISSLLVYTTLW 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ IG R + E +L + + + GS N + Sbjct: 121 AGWGSNNIYSLIGGIRGVAQMISYEVVLGFFIMLLLLLMGSYNWEFFLYFQSSYVFWGG- 179 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + + + + E+ + PFDL E E EL G EY G F ++ G + + Sbjct: 180 -MFMFMVSWIGMMLAELNRAPFDLIEGESELVSGFNVEYGGFIFALLFLGEYMNIWFMSW 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + + +F G ++K V VLVI + + R + ITW Sbjct: 239 ITILLFFGGGY--------------FLVIKSFVVVLVILYIRSLLPRFKFTDLIMITWKI 284 Query: 294 FGFAFLAFVSLLA 306 + L F +L Sbjct: 285 YLPLVLMFFFVLI 297 >UniRef50_A3DNE8 Hydrogenase-4 component C n=1 Tax=Staphylothermus marinus F1 RepID=A3DNE8_STAMF Length = 301 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 12/305 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPG-VLQEYRDIIKLLGRQSVGPDA 59 + + +I +V + PLL G+ R RARLH+R GP + Q + DI KLL ++ V D Sbjct: 3 LDISIYVISFIVFLFIPPLLDGLERKIRARLHSRVGPPTIFQTWYDIRKLLAKEQVATDT 62 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 F + + MLTI +P ++G LI + L A ++ + L G Sbjct: 63 FVNTFFIVSILFTTSMLTI-PLMPFGSIGIFSNSRNSLILFIILLASSQLLWVALSLSPG 121 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 +PF+ IG REA+L ++ E L+L + G T+ ++T+ ++ S +L + Sbjct: 122 NPFSTIGVYREALLEMVNELFLILTGFGLMVYIGGTSFRDLTN------INYSAIYILFI 175 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 +++ G++PFDLAEAE EL G L E+SG G++ + LK+ ++ + Sbjct: 176 VLLIVISYVSSGRVPFDLAEAEPELASGVLIEFSGPILGIVLYTNFLKRAILCGFIANLI 235 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 + + + ++ + + L L+ A+ +AR R+D+ PR + + + Sbjct: 236 L----LPLKSLVNDIVLAALFYLLLFFIWLIYAIVSILLARSRIDLAPRTMFVVYLLFYS 291 Query: 300 AFVSL 304 V L Sbjct: 292 IIVVL 296 >UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pediculus humanus corporis RepID=B8Y962_9NEOP Length = 289 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 115/306 (37%), Gaps = 28/306 (9%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS 60 + L L S R + R GP G+LQ D KLL + ++ P + Sbjct: 4 VFIVLSLLICVAYFSLFERKLLSLEQIRLGPNKVGPIGILQPLSDAPKLLSK-TICPQSE 62 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W + P++ ML+++ P+ + L+ L+++ +++ + +G S Sbjct: 63 SWELFIMPFITF--MLSVSWWYPLYFPKTLWESNNSLLILIFISSVSVYALIFTGSLPKS 120 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 ++A+G+ R L + E + + A V S +I + + I +++ Sbjct: 121 KYSALGSLRAITLSISFELVFSTAMLSMAVVFNSFSIKFMATNQSVPNI---ISMIVVGI 177 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 + E G+ PFDL E+E EL G EY GS + ++ SL + + +F Sbjct: 178 LVWTSLIAECGRTPFDLPESESELVSGFNVEYGGSRYVLLYLSESLLLTISSIIMSILFT 237 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 + ++ + + + S R+R D W L Sbjct: 238 CGYNP----------------LVVLTWISISIVMRASNPRIRYDKCMMFGWEFSIPLILM 281 Query: 301 FVSLLA 306 F+S+ Sbjct: 282 FMSIYV 287 >UniRef50_Q8HQJ2 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Arthropoda RepID=Q8HQJ2_ORNMO Length = 324 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 110/309 (35%), Gaps = 23/309 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L I L++ + + R +H R+GP G+ Q + D +KL ++ Sbjct: 2 LLCDFILLLMVLVSVAFFTLLERKVLGYIHLRKGPNSVGIIGMFQPFADAVKLFCKEMNF 61 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 ++ ++ ++L + + + + LI L + ++ + G Sbjct: 62 MKFMN-IYMYMWISVISLILMMMGWILYYWGKNQVEIEYGLIYFLCVSSLGVYVILGGGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S + +G+ R + E + L +GS NI +++ + + + Sbjct: 121 ASNSKYGLLGSFRGLAQVISYEVGMSFVLMGIIYFSGSYNIMVVSEFQEKFWMVWG--MT 178 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 ++F E+ + PFDL E E EL G EY GF ++ + + + Sbjct: 179 GLFFLWMISSFAEVNRSPFDLCEGESELVSGFNVEYGSYGFALLFISEYGNIIFMSMLSC 238 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F L + L++ + + L ++ R R D + W Sbjct: 239 IMFFG--------------GLGYMSLLLLMFMYLYLLIRGTLVRFRYDFLMMVAWKVVLP 284 Query: 297 AFLAFVSLL 305 + F + Sbjct: 285 CSMFFYYIF 293 >UniRef50_B5Y905 Hydrogenase-4 component C n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y905_COPPD Length = 316 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 114/304 (37%), Gaps = 19/304 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQ-SVGPDA 59 M V+Y L+ L+L A L+ GI R ARL R GP Q D +KL ++ V + Sbjct: 1 MKVVYWLLWILLLSIWALLVGGIDRKIVARLQGRYGPPFWQNITDFVKLFYKKGKVASRS 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGS---PLPQLGDLITLLYLFAIARFFFAISGL 116 + V + + + + LP G L GDLI Y FA+ + + G Sbjct: 61 ALMVVDAALVMGIVAAVLALSVLPFPMAGGYFQLLSTNGDLIIFAYAFALMAMVYVLIGF 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA---------GSTNISNITDTVYHW 167 SP+T +GASRE + + E +L + A ++S + Sbjct: 121 GGKSPYTLVGASREISMLLSYEVPFILLIVALGYRAVFVTGLPVESIFSMSALLVAKSQL 180 Query: 168 PLSQSIPLVLA-LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 P+ L +G +PFD+ EAE E+ +G +E G V+ + Sbjct: 181 GTLLMDPIFLGTFLVLLVLGPAIVGSVPFDIPEAETEIVDGYGAELHGPRLAVLFGLKHM 240 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 K + VF+ F L L+V +++ + R R+D Sbjct: 241 KLIAYSYFLWMVFVSPASGNVFVNL-----LSTLFGTLLVAIIINTIPRAVSGRFRIDQG 295 Query: 287 PRIT 290 + Sbjct: 296 AKFY 299 >UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Philopteridae RepID=Q2HJL2_9NEOP Length = 299 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 12/224 (5%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS-GWVFRLTPYVM 71 S R + R+GP GVLQ + D +KL+ + P +++ ++P + Sbjct: 24 FFSLYERKLMGLVQGRKGPNKVGVGGVLQPFADAMKLISKNEYAPSKVIKFIYAVSPMIS 83 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 + L PV+ + ++ LL LF+++ + F +SG + S + IG +R Sbjct: 84 FFISLVFWIMYPVIW--NFFSLNLSIVFLLVLFSVSVYGFILSGWFSSSKYANIGCARAL 141 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E L L + ++S I + + L + + + FA E Sbjct: 142 AQSISYEVGLTLSIIFFCLFFSCISLSEILEVQEFFFFFPFSFLFVFMWSIFFA---ETN 198 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + PFDLAE E EL++G + ++ G +L L V + Sbjct: 199 RPPFDLAEGESELKKGFCVKKGEMSNPLIFLGENLSVLFVSILL 242 >UniRef50_Q6SL32 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Armillifer armillatus RepID=Q6SL32_9MAXI Length = 305 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 109/307 (35%), Gaps = 29/307 (9%) Query: 3 VLYPLIQALVLFAVA----PLLSGITRVARARLHNRRGP-----GVLQEYRDIIKLLGRQ 53 ++ +Q LVL + ++ + R + + R GP G LQ + D +KL+ + Sbjct: 1 MMLGFLQVLVLLVMGVMGLAFVTLVERKILSLVQWREGPNKVGGGYLQPFSDALKLVSKG 60 Query: 54 SVG-PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 V + + + ++ + +M+ + P L L+ + + +++ + Sbjct: 61 WVVLGEGDLGGYVMGAWLFIFLMMLLWGMYPTFWGVYSLEWT--LLCFILVLSVSVYGLL 118 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 +SG + S + +G R V E L+L + G + + + Sbjct: 119 VSGWMSNSKYGLLGGVRSVAQTVSYEVSLVLVVMYWVLYMGGYGLEVTME-----GVWLV 173 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 +L E+ + PFD +E E EL G EY F + + Sbjct: 174 FLNILMFVIMGVVCISELNRSPFDFSEGESELVSGYNVEYGSLLFVYIFMSEYGFVVFWS 233 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +F+ L +I +K+++ + + + R R D ++W Sbjct: 234 GLLGWMFM------------GGLGGLIGGLKVMLLSWGVLWWRGVLPRFRYDKLMFLSWG 281 Query: 293 GFGFAFL 299 + L Sbjct: 282 VLLYCSL 288 >UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 n=5 Tax=Thermoproteaceae RepID=A1RV03_PYRIL Length = 350 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 115/313 (36%), Gaps = 23/313 (7%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVG 56 + +I + + + R A AR+ R GP G LQ D K + + + Sbjct: 21 FFIIMFIASSVILLTVVWFERKAAARVQMRVGPYHVSPWLGGYLQLLADAFKFIISEPII 80 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLG----DLITLLYLFAIARFFF 111 P A +F P + + + + LP+ + + L+ L + + Sbjct: 81 PKGAHKILFVWGPAIFITLAFGASLLLPLTPELRLIKDVNLLPYGLVFSLVILLLVSISV 140 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ 171 I G + F IGA REA+L E L+L A + G+ N I + L Sbjct: 141 VIIGWSVNNKFAYIGAVREALLVTAYEIPLILSFLAMAILYGTLNPIEIVNKQSL--LVG 198 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 +I LA AT + + PF++A+ E ++ GP S+Y G + G + Sbjct: 199 AILNPLAFLVFIIATAMATARFPFEIADYEGDVATGPYSDYGGIFLVLSFAGGTYYATFS 258 Query: 232 LQMFVGVFIPWGQMETFT--------AGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 F + G G L+ V +K+ + + + A +M LRL Sbjct: 259 FSFFATLLFLGGWALPSYVVGPWPQDLLGHLVLAVWVFLKVTILMFLFAFLRAAMPVLRL 318 Query: 284 DITPRITWAGFGF 296 D T + W G Sbjct: 319 DHTLILGWRGLLI 331 >UniRef50_A0MJG3 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=4 Tax=Squamata RepID=A0MJG3_9SAUR Length = 200 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 8/191 (4%) Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 SG + S + +GA R + E L L + A ++G ++ +T H + Sbjct: 1 ILWSGWSSNSKYPLMGAMRAVAQIISYEVTLGLIIISMAIMSGGYSLMQFMETQEH--MW 58 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + +T E + PFDL E E EL G E+S F ++ L+ Sbjct: 59 LLLSSWPLAMMWFTSTLAETNRSPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILL 118 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + + +F+ G M L++ K + ++ S R R D + Sbjct: 119 MNTLSTMMFLNPGTMNPQMFTINLMS------KTMALTILFLWIRASYPRFRYDQLMHLL 172 Query: 291 WAGFGFAFLAF 301 W + LA Sbjct: 173 WKQYLPLTLAM 183 >UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Microcotyle sebastis RepID=A3QRI2_9PLAT Length = 305 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 104/306 (33%), Gaps = 30/306 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + L +I ++ F + + R R GP G+LQ + D IKLL + V Sbjct: 9 TFLVYVIVTVIFFVLVAFFVLLERKILGVCQARLGPQKVSFLGILQSFADFIKLLAKLGV 68 Query: 56 GPDASGWV-----FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 + + F + + T + ++ S L+ +++ + Sbjct: 69 SFGSYKGLKYRGLFYWLGVIYFLLGATTFISFFILGNVSSWVVSNYTCWLIVFSSLSGYG 128 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 F + G + S ++ GA R + + E +L+ + G + S I + + S Sbjct: 129 FIMCGWGSNSKYSLYGAIRASFSSISFEGVLMCIVLSVGLYYGCYSFSVINN----YEGS 184 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 SI + E + PFD +E+E +L G ++Y G+ F ++ ++ Sbjct: 185 LSIGALTLYICSVIGVMSECNRSPFDFSESESDLVSGFNTDYYGASFAILF-ASEYSIMI 243 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 F+G F G LL L ++ R R D Sbjct: 244 FFSWFLGYFF----------MGSLLGLGFFF----FHSFILIFVRACFPRFRYDYYVNFV 289 Query: 291 WAGFGF 296 W Sbjct: 290 WKNLFI 295 >UniRef50_A7C247 Respiratory-chain NADH dehydrogenase, subunit 1 n=3 Tax=Gammaproteobacteria RepID=A7C247_9GAMM Length = 306 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 16/260 (6%) Query: 35 RGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQL 94 GP Q DIIKL +++ + G++ + +++G + LPV + + L Sbjct: 44 VGPPFWQPVYDIIKLYAKKTQI--SHGYMHDVAVMMLLGGYIASEIFLPVPGM-NGLANQ 100 Query: 95 GDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGS 154 DL+TL+YL + A+ +P +IG SR + + ++ + AA GS Sbjct: 101 ADLLTLMYLLMVPMLGMALGVGQCANPNGSIGISRALSSMLAYDVPFVIVVAGAAVSYGS 160 Query: 155 TNISNITDTVYHWP--LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 TN+ I + + L A + + +GK PF++ A E+ GP+ E Sbjct: 161 TNLVQIIEIQQQGGPATWGLFSMPLLAIAGLISMYAMLGKEPFEIYVAPAEIATGPMVEM 220 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIA 272 SG G + + V ++ +F+ G + + K+ V + Sbjct: 221 SGKYMGTLFVMQCFQLYTVGVLYTTLFLGGG-----------ANWLTFLPKVFAVVFISV 269 Query: 273 LFENSMARLRLDITPRITWA 292 N R R D R W Sbjct: 270 AITNVFGRYRTDDVIRWLWK 289 >UniRef50_D0Z5P3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Styela plicata RepID=D0Z5P3_STYPL Length = 303 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 107/302 (35%), Gaps = 27/302 (8%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS 60 ++ LV+ + L R + R+GP G++Q D +KLL ++ GP Sbjct: 17 IVFILVILLLVAFLVLYERKILGFIQERKGPNVVGIFGLVQTVYDGLKLLSKKDKGP--M 74 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 G+ F + P + + L LPV L ++ L + + G + + Sbjct: 75 GFFFIVMPIYGMVLSLFQWVFLPVPFFIMQLEY--SIVFTFILSGLLVYVVLGCGWQSVN 132 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 + IG+ R + E + + + + N S+ S S + + Sbjct: 133 SYGVIGSMRSVAQMISYEVVFFFFVMMFMFSFKNFNWSDFLHFE---GFSGSNLKIFFVF 189 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 T E+ + PFDL E E EL G +EY G F ++ ++ +F +F Sbjct: 190 IWLVMTMAELNRSPFDLVEGESELVSGFNTEYMGYNFTLLFLSEYGNIWMMGMLFGLIFG 249 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 LV ++ V V + + RL+ +TW A Sbjct: 250 G--------------GLVDMASLTLLYVSVTVIIRGFLPRLKFSDLINLTWKICLPAVFF 295 Query: 301 FV 302 F+ Sbjct: 296 FL 297 >UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=25 Tax=Formica RepID=Q8HET7_FORTR Length = 293 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 109/294 (37%), Gaps = 21/294 (7%) Query: 19 LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYVM 71 L+ + R + R+GP G+ Q + D IKL ++ S + +F L P +M Sbjct: 3 FLTLLERKILGYVQMRKGPNKVMIIGMFQPFSDAIKLFNKELFYVYKSNYNLFYLCPVLM 62 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 VML P +T L ++ L+ L +I+ + G + S ++ +G+ R Sbjct: 63 FSVMLMSWMLFPYITNIYFLNYS--MLLLILLMSISGYTMIFMGWSSNSIYSMMGSMRSV 120 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + E + +++ ++ S + + + + + + E+ Sbjct: 121 SQMLSYEVSFIFIIFILMIMSESYSFLDFMNYQIY--VWYLFIFYPLFLMYFISVLAELN 178 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 + P D E E EL G EY GF ++ + + V +F Sbjct: 179 RSPMDFIEGESELVSGFNIEYFSGGFTLIFLAEYGMIIFFSFLSVLLF----------TN 228 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 L + + + ++V ++ + R+R D + W L +V L+ Sbjct: 229 LLKYSNMFMFMFIMVMSCLVIFMRGLLPRMRYDELMYLCWKIILPMILLYVLLI 282 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycet... 261 2e-68 UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Ac... 256 5e-67 UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular or... 253 7e-66 UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 253 7e-66 UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 250 5e-65 UniRef50_B5GCW5 Truncated NADH-quinone oxidoreductase subunits H... 248 2e-64 UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular or... 246 9e-64 UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomy... 241 2e-62 UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemm... 237 3e-61 UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacte... 235 1e-60 UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=c... 235 2e-60 UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=ce... 233 4e-60 UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Ru... 232 1e-59 UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax... 231 3e-59 UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi... 230 7e-59 UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidet... 228 2e-58 UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=c... 228 2e-58 UniRef50_Q47LF1 NADH-quinone oxidoreductase subunit H n=145 Tax=... 228 3e-58 UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=c... 227 3e-58 UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=ce... 227 3e-58 UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bact... 227 4e-58 UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=... 226 5e-58 UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=ce... 226 5e-58 UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirel... 226 7e-58 UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax... 226 8e-58 UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexu... 226 9e-58 UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=B... 224 2e-57 UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=C... 224 2e-57 UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter... 222 2e-56 UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=... 221 2e-56 UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinom... 220 4e-56 UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Ba... 220 4e-56 UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 220 6e-56 UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=... 219 1e-55 UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria... 219 1e-55 UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=F... 218 2e-55 UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella... 218 3e-55 UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiph... 217 4e-55 UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Cone... 216 5e-55 UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 216 8e-55 UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=... 215 2e-54 UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Ta... 215 2e-54 UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=c... 215 2e-54 UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=... 215 2e-54 UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyce... 212 1e-53 UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemm... 211 2e-53 UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=B... 211 4e-53 UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=... 210 5e-53 UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rh... 210 5e-53 UniRef50_C1ZFV5 NADH dehydrogenase subunit H n=1 Tax=Planctomyce... 209 7e-53 UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Ga... 208 2e-52 UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=... 208 2e-52 UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 Re... 207 4e-52 UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax... 207 4e-52 UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular or... 207 4e-52 UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 206 8e-52 UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 206 9e-52 UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=... 206 9e-52 UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula s... 205 1e-51 UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Ba... 205 2e-51 UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 205 2e-51 UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=B... 205 2e-51 UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=B... 204 3e-51 UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=... 202 1e-50 UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloro... 201 2e-50 UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax... 199 7e-50 UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=A... 198 2e-49 UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteob... 198 3e-49 UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax... 197 4e-49 UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=... 197 4e-49 UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 196 8e-49 UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=V... 196 8e-49 UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Ba... 196 8e-49 UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase su... 194 2e-48 UniRef50_Q08SR0 NADH-quinone oxidoreductase chain h n=3 Tax=Cyst... 194 4e-48 UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax... 193 6e-48 UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomyce... 193 7e-48 UniRef50_C3RYN6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=E... 192 1e-47 UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=... 191 2e-47 UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bd... 191 3e-47 UniRef50_Q11RU2 NADH-quinone oxidoreductase subunit H 2 n=5 Tax=... 191 3e-47 UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=An... 191 3e-47 UniRef50_A9UKA6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=G... 188 3e-46 UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=... 186 8e-46 UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax... 186 1e-45 UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular... 185 2e-45 UniRef50_B8Y2U8 NAD(P)H-quinone oxidoreductase subunit 1 (Fragme... 185 2e-45 UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Ta... 185 2e-45 UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=M... 184 2e-45 UniRef50_D0LPX2 NADH dehydrogenase (Quinone) n=1 Tax=Haliangium ... 184 3e-45 UniRef50_A9RAG3 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=S... 184 3e-45 UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 183 6e-45 UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Meth... 183 1e-44 UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 182 2e-44 UniRef50_Q2WGD5 NADH dehydrogenase subunit 1 n=2 Tax=Tracheophyt... 181 2e-44 UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=He... 181 2e-44 UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmenta... 181 3e-44 UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteri... 181 3e-44 UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Meth... 180 5e-44 UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 180 5e-44 UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax... 180 5e-44 UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 180 6e-44 UniRef50_B2ULY6 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 179 8e-44 UniRef50_B1ZRS6 NADH dehydrogenase (Quinone) n=3 Tax=Verrucomicr... 179 8e-44 UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=P... 179 9e-44 UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=... 179 1e-43 UniRef50_P11658 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=... 177 3e-43 UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Ta... 177 3e-43 UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 177 3e-43 UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchae... 176 1e-42 UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=... 176 1e-42 UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=C... 174 3e-42 UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobac... 174 4e-42 UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=A... 172 2e-41 UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=T... 172 2e-41 UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=... 171 2e-41 UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collins... 171 3e-41 UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=D... 171 3e-41 UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 171 3e-41 UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=C... 171 3e-41 UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=A... 169 7e-41 UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen l... 169 8e-41 UniRef50_Q2IL08 Respiratory-chain NADH dehydrogenase, subunit 1 ... 169 1e-40 UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=I... 169 1e-40 UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria Rep... 169 1e-40 UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=A... 168 2e-40 UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=E... 168 2e-40 UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax... 167 3e-40 UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 167 4e-40 UniRef50_Q8WF33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=V... 167 5e-40 UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=L... 166 7e-40 UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus ... 166 1e-39 UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (Ec... 166 1e-39 UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 165 1e-39 UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n... 165 2e-39 UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=U... 164 3e-39 UniRef50_P48901 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=S... 164 3e-39 UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (Ec... 164 3e-39 UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax... 164 4e-39 UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 163 7e-39 UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n... 162 9e-39 UniRef50_C9V3N4 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=L... 162 1e-38 UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 162 1e-38 UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax... 162 2e-38 UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 ... 162 2e-38 UniRef50_B9LUF2 Respiratory-chain NADH dehydrogenase subunit 1 n... 161 2e-38 UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=C... 161 4e-38 UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n... 160 5e-38 UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter ... 160 6e-38 UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 159 8e-38 UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsi... 159 1e-37 UniRef50_Q6JCT2 NADH-ubiquinone oxidoreductase chain 1 n=20 Tax=... 158 2e-37 UniRef50_A8MB61 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga ... 158 2e-37 UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 157 3e-37 UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=A... 157 4e-37 UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 ... 157 5e-37 UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 157 5e-37 UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 ... 157 5e-37 UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=H... 157 6e-37 UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 156 7e-37 UniRef50_Q5W905 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=L... 156 8e-37 UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 156 1e-36 UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 156 1e-36 UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 155 2e-36 UniRef50_O99824 NADH-ubiquinone oxidoreductase chain 1 n=14 Tax=... 154 3e-36 UniRef50_B5U6L1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=D... 154 3e-36 UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 ... 154 4e-36 UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 154 5e-36 UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax... 153 7e-36 UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (... 152 1e-35 UniRef50_C8BPE3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 152 1e-35 UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n... 152 1e-35 UniRef50_Q8HQJ2 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=A... 152 2e-35 UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=E... 151 2e-35 UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter ... 151 3e-35 UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 151 3e-35 UniRef50_P48897 NADH-ubiquinone oxidoreductase chain 1 n=38 Tax=... 151 3e-35 UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococ... 151 5e-35 UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteoba... 150 7e-35 UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferr... 149 8e-35 UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 ... 149 1e-34 UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) ... 149 1e-34 UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergis... 149 2e-34 UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=... 148 2e-34 UniRef50_Q85UH6 NADH-ubiquinone oxidoreductase chain 1 n=18 Tax=... 147 3e-34 UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasm... 147 4e-34 UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermoco... 147 5e-34 UniRef50_A3E7R8 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 147 5e-34 UniRef50_A0MJG3 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 147 6e-34 UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alph... 147 6e-34 UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=T... 146 7e-34 UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=B... 146 9e-34 UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen l... 146 1e-33 UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax... 146 1e-33 UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Acti... 146 1e-33 UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Ta... 146 1e-33 UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 145 2e-33 UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 145 2e-33 UniRef50_D2D0L0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=L... 144 4e-33 UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 144 5e-33 UniRef50_C8YLY6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=A... 143 6e-33 UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subuni... 143 7e-33 UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 143 7e-33 UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteob... 143 9e-33 UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n... 142 2e-32 UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) ... 142 2e-32 UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment... 141 4e-32 UniRef50_B3IUI3 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=L... 141 4e-32 UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 139 8e-32 UniRef50_Q6SL32 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=A... 139 9e-32 UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobac... 139 1e-31 UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Acidulipr... 139 1e-31 UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcace... 139 1e-31 UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoide... 138 2e-31 UniRef50_D0Z5P3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=S... 138 2e-31 UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4... 137 3e-31 UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina... 137 3e-31 UniRef50_Q9B8G7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=H... 137 5e-31 UniRef50_Q68RK6 NADH-ubiquinone oxidoreductase chain 1 n=54 Tax=... 137 5e-31 UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfit... 136 7e-31 UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=S... 136 1e-30 UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen l... 136 1e-30 UniRef50_Q64LH8 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=P... 136 1e-30 UniRef50_Q9T9H0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=H... 136 1e-30 UniRef50_A8ABL9 NADH dehydrogenase (Quinone) n=1 Tax=Ignicoccus ... 135 2e-30 UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n... 134 4e-30 UniRef50_P34847 NADH-ubiquinone oxidoreductase chain 1 n=12 Tax=... 134 4e-30 UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=P... 134 5e-30 UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 ... 134 5e-30 UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n... 133 7e-30 UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=M... 132 1e-29 UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organ... 132 1e-29 UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen l... 132 2e-29 UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota... 131 2e-29 UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 ... 130 7e-29 UniRef50_A2BJ97 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=H... 130 8e-29 UniRef50_Q9T9L2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=D... 129 1e-28 UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit H... 129 2e-28 UniRef50_P24887 NADH-ubiquinone oxidoreductase chain 1 n=9 Tax=R... 129 2e-28 UniRef50_Q3JDU8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 128 2e-28 UniRef50_P24875 NADH-ubiquinone oxidoreductase chain 1 n=42 Tax=... 128 2e-28 UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 ... 128 2e-28 UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 ... 128 3e-28 UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 ... 128 3e-28 UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L... 127 3e-28 UniRef50_B6RQZ1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=A... 127 4e-28 UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-li... 127 5e-28 UniRef50_Q9B893 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=S... 126 1e-27 UniRef50_Q7YH66 NADH-ubiquinone oxidoreductase chain 1 n=268 Tax... 126 1e-27 UniRef50_C4FLW9 NADH-quinone oxidoreductase, subunit h (Fragment... 125 1e-27 Sequences not found previously or not previously below threshold: >UniRef50_C7MTD4 NADH dehydrogenase subunit H n=5 Tax=Actinomycetales RepID=C7MTD4_SACVD Length = 441 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 117/326 (35%), Gaps = 22/326 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + +L ++ L+ + + R A R+ NR GP G Q D IKL ++ Sbjct: 14 LILLKAVVILLIGPILTVFMIVWERKALGRMQNRPGPNRVGPNGWFQSIADAIKLPFKEQ 73 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 V P A ++ L P ++ + A+P + ++ +L Sbjct: 74 VIPDTADRKIYFLAPMIVAVPAMIGLAAIPFGPEVTIFGERTVLQLIELPVSVLLILAGA 133 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G +GSP+ +G R A + E + L + A A S + I Sbjct: 134 SVGVYGIILAGWASGSPYPLLGGLRSAAQVISYEIAMGLSIVGVALYAQSLSTGEIVAAQ 193 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 H L+ + + E + PFDL EAE EL G +EYS F + Sbjct: 194 EHG--WYFYLLLPSFVIYLISMVGETNRAPFDLPEAESELVGGFHTEYSSMKFAMFFLAE 251 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGL----LLALVIAIVKLVVGVLVIALFENSMAR 280 ++V +F+ L L+ K + + ++ R Sbjct: 252 YCNMIIVSAFATTLFLGGWMFPFVGLDSPLNQGWLPLLWFFGKTFLLLFGFIWLRGTLPR 311 Query: 281 LRLDITPRITWAGFGFAFLAFVSLLA 306 R D ++ W L +V +++ Sbjct: 312 FRYDQFMKLGWKVLIPVALIWVMVIS 337 >UniRef50_Q0S443 NADH-quinone oxidoreductase subunit H n=9 Tax=Actinomycetales RepID=NUOH_RHOSR Length = 450 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 111/327 (33%), Gaps = 23/327 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + + L + L L R A + R GP G+LQ D IKL ++ Sbjct: 20 LVLGKALAIFVFLVLTPLLTILAERKVMAWMQMRVGPNRVGPRGMLQSLADGIKLALKEG 79 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 + P ++ L P + +P S ++ +L Sbjct: 80 IVPKGVDKPIYILAPVIAAVPAFMAFAVIPFGPAVSIFGHYTPLQLTDLPVAVLYVLAAT 139 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 +I + ++G +GS + +G R + E + L AG+ + S I Sbjct: 140 SIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALSFAAVFLDAGTMSTSGIVAAQ 199 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 H L+ + + E + PFDL EAE EL G +EYS F + Sbjct: 200 EHT--WYVFLLLPSFLIYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLSFAMFMLAE 257 Query: 225 SLKQLVVLQMFVGVFIPWGQMETF-----TAGGLLLALVIAIVKLVVGVLVIALFENSMA 279 + + V + +F+ A ++ +K+ + V ++ Sbjct: 258 YVNMVTVSALATTLFLGGWHAPFPLSLWDGANSGWWPVLWFTLKVWGFLFVFVWLRATLP 317 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLA 306 RLR D + W L +V ++A Sbjct: 318 RLRYDQFMGLGWKILIPISLVWVMIVA 344 >UniRef50_D2SHE7 NADH dehydrogenase (Quinone) n=8 Tax=cellular organisms RepID=D2SHE7_9ACTO Length = 486 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 123/339 (36%), Gaps = 33/339 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ + VL + R AR+ R GP G LQ D +KL ++ Sbjct: 22 IVLIKVVGVFGVLVLMTLFAIVFERKVVARMQQRIGPNRVGPRGYLQSLADGLKLAFKED 81 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 + P A V+ L P + + +P+ V S ++ +L Sbjct: 82 IMPALADKPVYFLAPVLATVPAFLAFSVIPLGPVVSIFGQQTPLQLTDAPIGVLIVLACS 141 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 A+ + + G +GS + +G+ R A V E + L + AGS + S I Sbjct: 142 AMGIYGIVLGGWASGSTYPLLGSLRSAAQMVSYEIAMGLSIVAVFLYAGSMSTSEIVAAQ 201 Query: 165 ------------YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 + P +I L ++ A A E + PFDL EAE EL G +EY Sbjct: 202 ADGNQVSFFGLEFTGPGWYAILLPVSFVIYAIAVVGETNRAPFDLPEAESELVGGFHTEY 261 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF-----TAGGLLLALVIAIVKLVVG 267 S F + + + V + +F+ + A L+ +K+V Sbjct: 262 SSLKFALFFLAEYINMVTVSALAATLFLGGWRAPWPISIWDGANSGWWPLLWFFLKVVAA 321 Query: 268 VLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 + V ++ RLR D R W A++ +A Sbjct: 322 LFVFIWLRGTLPRLRYDQFMRFGWKVLVPVAFAWILAVA 360 >UniRef50_A0LRI8 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_ACIC1 Length = 451 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 119/328 (36%), Gaps = 23/328 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ L L + R AR+ R GP G+LQ D +KL ++ Sbjct: 30 LIIVKTLGVFAFLVLATLFMIWAERRVVARMQQRIGPNRVGPFGLLQSLADGLKLALKED 89 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 + P A VF L P + +P S ++ +L + Sbjct: 90 IVPTLADKAVFILAPVISATPAFLAFAVIPFGPTVSIAGHHTNLQLTDLPVAVLFVLAMS 149 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G +GSP+ +G R A V E + L +GS + S+I Sbjct: 150 SLGVYGIVLAGWSSGSPYPLLGGVRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQ 209 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 H + ++ A A E + PFDL E E E+ G +EY+ F + Sbjct: 210 AHR--WGILWAGVSFAVYAIAMVGETNRAPFDLPEGETEIVGGFHTEYTSLKFALFYLAE 267 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGG-----LLLALVIAIVKLVVGVLVIALFENSMA 279 + + V + +F+ + + ++ ++KL + + V ++ Sbjct: 268 YINMVTVSALMTTLFLGGWRAPWPLSLWSQANVGWWPVLWFLIKLGIVLFVFIWLRGTLP 327 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLAA 307 R R D + W L ++ + AA Sbjct: 328 RFRYDQFMQFGWKVLIPVNLTWILVEAA 355 >UniRef50_C7M2U4 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U4_ACIFD Length = 420 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 125/320 (39%), Gaps = 22/320 (6%) Query: 10 ALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGW 62 + L + R + + NR GP G+LQ D IKL ++ + P+ + + Sbjct: 27 FAAMMVSVLLAIWVERKVISDMQNRIGPNRAGPFGLLQSLADGIKLFFKEDLIPERSDRF 86 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAI 113 +F+L PY+ + T +P+ V ++ LL + +I+ + + Sbjct: 87 IFKLAPYLSLVPAFLTFTIVPIGGVVDLFGHRTELQVADPPIGILLLLAMSSISVYGVML 146 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G +GS + IG+ R + + E + L + V GS + ++ L Sbjct: 147 AGWSSGSKYPLIGSVRASAQMISYEAAMGLSIAAVVLVTGSLSTRDMVTGQLGTYLGFIP 206 Query: 174 ------PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 V+ A E+ + PFDL EAEQEL G +EYS F + L Sbjct: 207 HWNLIRLGVIPFVIFIVAITAEVNRPPFDLVEAEQELVGGFHTEYSSIRFALFYLAEYLN 266 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 + + + V +F L +V +VK + ++ F ++ RLR D Sbjct: 267 TITMSAIMVTLFFGGPDGPDPHVLHWLWPIVWFLVKTSIFFVIYVWFRAALPRLRYDQLM 326 Query: 288 RITWAGFGFAFLAFVSLLAA 307 + W L ++ ++A Sbjct: 327 DLGWKVLIPVSLLWLLVVAG 346 >UniRef50_B5GCW5 Truncated NADH-quinone oxidoreductase subunits H/I n=2 Tax=Streptomyces RepID=B5GCW5_9ACTO Length = 470 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 113/331 (34%), Gaps = 27/331 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + + + L R + R GP G+LQ D KL+ ++ Sbjct: 31 LVAIKAVFCFAFLMISVLFAIVWERKVVGWMQLRIGPNRTGPWGMLQSLADGAKLMLKED 90 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGD------------LITLL 101 + A V+ + P V +P G+ + G ++ +L Sbjct: 91 LLVKRADKAVYIIAPVVAAIPAFMAIAVIPFGPAGNEISVFGHRTAMQLTDLPIAMLYIL 150 Query: 102 YLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT 161 ++ + ++G +GS + +G R + E + +GS + S I Sbjct: 151 ATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLYSGSMSTSAIV 210 Query: 162 DTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 D + L ++ E + PFD+ E+E +L G +EYS F + Sbjct: 211 DAQNGR--WYIVLLPVSFLLYIVTMVGETNRAPFDMPESEGDLVGGFNTEYSSIKFAMFM 268 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGL------LLALVIAIVKLVVGVLVIALFE 275 + + V + +F+ + + ++ +VK+ + + Sbjct: 269 LAEYVNMVTVSSVAATLFLGGWRAPWPISTFWEGANHGWWPILWLVVKVQLLLFFFIWLR 328 Query: 276 NSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 S+ R+R D ++ W + ++ L+A Sbjct: 329 GSLPRVRYDQLMKLGWKVLIPVSVVWLMLVA 359 >UniRef50_A9F4Q4 NADH dehydrogenase subunit 1 n=2 Tax=cellular organisms RepID=A9F4Q4_SORC5 Length = 645 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 125/331 (37%), Gaps = 28/331 (8%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + I L + A +++ + R AR+ +R GP G+L D IK + ++ V P Sbjct: 264 VAAAIILLFMAPTAGIITWVERRVSARMQSRIGPNRAGPQGLLVWVADGIKSIMKEDVIP 323 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 ++ +FRL PY++ + +P ++ ++ + ++ G Sbjct: 324 AESDKALFRLAPYLVFVGVSATFVVMPFGQYLIAADLDIGILFVIAVTSLVTIGLMTGGW 383 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV------------ 164 + + ++ +G R A + E + + + GS + +I Sbjct: 384 ASNNKWSLLGGIRSAAQIISYEIPGAVAIVCIVMMTGSLRLQDIIGAQGGAGPSLLDVGG 443 Query: 165 --YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKW 222 +HW + ++ E + PFDL EAE EL G +EYSG + + Sbjct: 444 WPWHWFVFRNPITFALFFLYFTTALAEGNRAPFDLPEAESELVAGYSTEYSGMRYLFFFF 503 Query: 223 GISLKQLVVLQMFVGVFIPWGQMETFTA-------GGLLLALVIAIVKLVVGVLVIALFE 275 V+ + +F+ Q+ + G L+ + + ++K V V+ Sbjct: 504 AEWANVFVMCGIASALFLGGWQIPGVSPAQQEASFGLQLVGVFLFLLKSWALVFVVIWIR 563 Query: 276 NSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 ++ R+R+D + W F A L A Sbjct: 564 WTLPRVRIDQMMNLCWKWFVPLSFAAFLLTA 594 >UniRef50_D0WMG8 NADH dehydrogenase I, H subunit n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMG8_9ACTO Length = 500 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 118/330 (35%), Gaps = 28/330 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 VL + L L + R AR+ R GP G+ Q + D +KLL ++ + Sbjct: 23 VLKAAFIIVFLIMNVLLALWVERRGLARMQTRLGPNRVGPLGLGQAFADAVKLLIKEDLW 82 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAI 106 A ++ + P+V T+ +P+ S ++ +L + A+ Sbjct: 83 LKGADKIIYFVAPFVGAVCAFTVMAVVPMGPNVSIFGHSTPLQLADSPVAVLFVLAIAAL 142 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + + G S G+ R A + E L L L AG+ ++S I Sbjct: 143 GEYGLVLGGWSAHSTLPFYGSVRGATQMISYELALGLSLVTVFLTAGTMSMSGIVAAQSD 202 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 L + L A + F E +LPFDL EAE E+ G +EYS F + Sbjct: 203 --LWNIVTLFPAFVVYLISMFGETNRLPFDLPEAEGEIVAGHTTEYSSMKFAWFFLSEYI 260 Query: 227 KQLVVLQMFVGVFIPWGQMETFT----------AGGLLLALVIAIVKLVVGVLVIALFEN 276 L V + VF+ + + T L + K + + Sbjct: 261 NMLNVSMVATTVFLGGWRADPITTSVFSLWGGNPNTGWLPALWFFGKTWTLMFFMIWTRG 320 Query: 277 SMARLRLDITPRITWAGFGFAFLAFVSLLA 306 ++ R+R D + W L ++ L+A Sbjct: 321 TLMRMRYDHFMKFGWKVLIPVSLTWLVLVA 350 >UniRef50_C1A8Y7 NADH-quinone oxidoreductase chain H n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y7_GEMAT Length = 418 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 125/328 (38%), Gaps = 25/328 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ L+ V +L+ + R A +RRGP G+LQ D IK ++ Sbjct: 1 MVKILVVFGVWMLTVAMLTLVERKLAAWFQDRRGPNRAGPGGILQPVADGIKNFMKEETN 60 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPV---------VTVGSPLPQLGDLITLLYLFAI 106 P A W+F + P + + +P+ + + P + +L + ++ Sbjct: 61 PPFADRWLFIIAPALAFIPAMLTWAVIPLAAPLPTPWGLIDMAVAPVPVGFLFVLAISSL 120 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + ++G + + + +G R + V E + + +AG+ +++ I Sbjct: 121 GVYGMVLAGWSSNNKYALLGGLRSSAQMVSYEIAMGMSTIPVLLLAGNVSLNTIVQQQAG 180 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 L +A A F E +LPFDL EAE EL G +EYSG F + Sbjct: 181 MG-WNVFSLTIAWFTFLVAAFAETNRLPFDLPEAESELVAGYHTEYSGMKFSMFFIAEYS 239 Query: 227 KQLVVLQMFVGVFIPWGQME--------TFTAGGLLLALVIAIVKLVVGVLVIALFENSM 278 + V + +F + FT L+ L+ +K + V ++ Sbjct: 240 NMITVSALTATMFFGGWDLPFTQWDNVAPFTVLKTLVTLIAFALKTGFFIFVFMWVRWTL 299 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSLLA 306 R R D + W+ LA++ ++A Sbjct: 300 PRFRYDQLMSLGWSIMLPVALAYIVIIA 327 >UniRef50_C0VVK9 NADH dehydrogenase subunit H n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK9_9CORY Length = 446 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 121/334 (36%), Gaps = 30/334 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ +I + +A + R A + +R GP G+LQ D +K + ++ Sbjct: 15 LILIKAIIFFALPLLMAIVTVWYERRLLAFMQSRLGPNMAGPIGLLQPMSDGVKTIFKED 74 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 P +VF L P++ T + LP+ S ++ +L + Sbjct: 75 FMPKGVDKFVFTLAPFITGTAAFTTWSVLPLGGRVSIFGHETQLQNGDLPVAVLFILAVA 134 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + + ++G + S ++ +G R A + E + L + VAG+ + I + Sbjct: 135 GLGTYGLVLAGWSSTSRYSLLGGLRAAAQMISYEISMGLAVVAVVLVAGTMSTLGIVEAQ 194 Query: 165 YHW----------PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 P + L+ A E + PFD+ E E EL G ++YSG Sbjct: 195 SETLTLFGWESPLPAWNFLILMPAFLIFCVTMLAEANRAPFDMPECESELVGGYGTDYSG 254 Query: 215 SGFGVMKWGISLKQLVVLQMFVGVFIPW----GQMETFTAGGLLLALVIAIVKLVVGVLV 270 F + G + + + +F+ + G ++ I+K+ + + Sbjct: 255 FRFAMFYLGEYMNMGTLSAICATLFLGGFHAPWPLNGTALDGGWWGIMWFIIKVAIMLFF 314 Query: 271 IALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 ++ R R D + W L F+ + Sbjct: 315 FIWVRATVPRYRYDQLMDVGWKTLLPLALGFLMV 348 >UniRef50_A5CFN5 NADH-quinone oxidoreductase subunit H n=72 Tax=cellular organisms RepID=NUOH_ORITB Length = 356 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 122/312 (39%), Gaps = 9/312 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + + + L L+ R A + R GP G+LQ D IKL+ ++ + P Sbjct: 26 IKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFKEPIIP 85 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQL-GDLITLLYLFAIARFFFAISG 115 A +F + P + + L + +P+ G ++ +L + ++ + I+G Sbjct: 86 AKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAG 145 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R A + E + L + V G ++ I + P+ +I + Sbjct: 146 WASNSKYAFLGAVRSAAQMISYELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTIMM 205 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + + +LPFDL EAE EL G EYS F + G ++ + Sbjct: 206 LPLAVIYFISILAKTNRLPFDLPEAESELVAGYNVEYSSMAFAMFFLGEYANMILGSSLM 265 Query: 236 VGVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ + + I+K+ + + ++ R R D + F Sbjct: 266 TIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLFCFLWIRATLPRYRYDQLMYLGLKVF 325 Query: 295 GFAFLAFVSLLA 306 LA++ +++ Sbjct: 326 LPIVLAWIIVVS 337 >UniRef50_Q6A6G5 NADH-quinone oxidoreductase subunit H n=4 Tax=cellular organisms RepID=NUOH_PROAC Length = 440 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 127/340 (37%), Gaps = 33/340 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGR 52 + ++ +I ++L A R A++ NR GP GV Q D +KL+ + Sbjct: 13 LIIVKVVILFVILLAWTIFNVWFERRVLAKMQNRIGPIMNSAWAGGVFQAVGDGLKLIFK 72 Query: 53 QSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLY 102 + + P A VF L P + + +P+ S ++ +L Sbjct: 73 EMLTPKGADKIVFNLAPVIAGIACFASWSVIPLGGQVSMFGHTTRLQITDVPVAVLFILA 132 Query: 103 LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD 162 + +I + ++G + ++ +G+ R + + E + L L +GS + S I + Sbjct: 133 VASIGIYGVVLAGWSSAGTYSLLGSLRSSAQMISYEVAMGLSLVTVFIFSGSMSTSQIVE 192 Query: 163 TVYHWPLS----------QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 + + + + L+ + F E +LPFDL E E EL G ++EY Sbjct: 193 SQANHLVVGGFDTHIAGHYWLLLIPSFVIYVITMFGESNRLPFDLPECESELVSGYITEY 252 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT-----AGGLLLALVIAIVKLVVG 267 SG +G+ + + + +F+ + L+ +K + Sbjct: 253 SGFPYGMYFLAEYINMATLSAVCTTLFLGGYRAPWPLNYFGVIDSGWWGLLWFFLKTQLV 312 Query: 268 VLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 + ++ R R D + W L +V L+AA Sbjct: 313 IFFFVWVRAAIPRFRYDHFMDLGWKVLIPVSLGWVLLVAA 352 >UniRef50_Q1AVI7 NADH-quinone oxidoreductase subunit H n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOH_RUBXD Length = 331 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 124/313 (39%), Gaps = 8/313 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ ++ +A +L+ R A + R GP G+LQ D++KL +++V Sbjct: 14 LISSATVIFLVLNIAAVLTLAERKVSAYIQLRYGPNRVGPRGLLQPAADVVKLFIKENVS 73 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A WVF P M + +P L+ + +I ++G Sbjct: 74 PGRADRWVFLAAPIAMFLPAAAVWLVIPFGPGMVVADLNIGLVYFFAITSIGALGVIMAG 133 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIP 174 + S F+ +GA R A + E L+L L A + GS ++ +I + P Sbjct: 134 YGSRSNFSLLGALRGAGQMISYEVPLILSLLGVAMLTGSLSMVDIVEYQAGGFWNWIIWP 193 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 + A + E+ ++PFDL E E E+ G + EYSG + +++ V+ + Sbjct: 194 QLPMFLAFFVSGLAEVKRIPFDLPEGESEIVGGFMIEYSGMTWALIQASEFASMAVMSAV 253 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ Q + + +K + + V ++ RLR+D + W Sbjct: 254 ASTLFLGGWQPPLPFLDLGVFNWLWLGIKTTLLIFVFQWIRWTLPRLRMDQLMDLGWKIL 313 Query: 295 GFAFLAFVSLLAA 307 + ++ + A Sbjct: 314 VPVTILWLFVTAG 326 >UniRef50_P92558 NADH-ubiquinone oxidoreductase chain 1 n=343 Tax=cellular organisms RepID=NU1M_ARATH Length = 325 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 114/299 (38%), Gaps = 10/299 (3%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPY 69 L R A + R+GP G+LQ D +KL+ ++ + P ++ + +FR+ P Sbjct: 20 VAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPV 79 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 + L +P L+ L + ++ + I+G + S + +GA R Sbjct: 80 ATFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALR 139 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIE 189 A V E + L L GS N+S I + IPL L + E Sbjct: 140 SAAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQ--IWFGIPLFPVLVMFFISCLAE 197 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM-ETF 248 + PFDL EAE EL G EYS GF + G +++ + F+ Sbjct: 198 TNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLFFLGGWLPILDL 257 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 + + +K++ + + + R R D + W F LA+V ++ Sbjct: 258 PIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWVVSVSG 316 >UniRef50_B8G6Z9 NADH dehydrogenase (Quinone) n=6 Tax=Chloroflexi (class) RepID=B8G6Z9_CHLAD Length = 407 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 72/340 (21%), Positives = 121/340 (35%), Gaps = 48/340 (14%) Query: 1 MSVLYPLIQALVLFAVA----PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLL 50 +++L +IQ V+ L+ R ARL NR GP G LQ D +KL Sbjct: 4 LTILIIVIQCFVITLAVTTAFAYLTLFERRLLARLQNRVGPNRAGPAGFLQPAADAVKLF 63 Query: 51 GRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVV--------------------TVGS 89 ++ + P A V+ L P + V L I +P + Sbjct: 64 FKEDIVPALADKPVYLLAPALAVIPALIIWAVIPFGCLNLNWDYQACYDPNRTNLWNILQ 123 Query: 90 PLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAA 149 ++ +L + +I + ++G + + ++ +G R + + E L + Sbjct: 124 ITDLNIGVLYILAITSIGVYGITLAGWASNNKYSMLGGIRSSAQLISYELALGCAVLSVV 183 Query: 150 QVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPL 209 G+ + I L IP +L A E+ + PFDL EAEQEL G Sbjct: 184 MTYGTLSTHEII-AQQRGWLWGIIPQLLGFFLYMIAATAEVVRAPFDLVEAEQELTGGYN 242 Query: 210 SEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG----------------L 253 +EY F + +K + V + V F G Sbjct: 243 TEYGSMKFALFFMAEYIKLIAVSALAVTFFFGGWHFPGLDILGREVTALAGPVAGSIVFG 302 Query: 254 LLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +++L ++K+VV + + S RLR D + W Sbjct: 303 IVSLGSFLLKVVVFLFISVWVRASWPRLRYDRLMDLGWKW 342 >UniRef50_D2QGQ8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteroidetes RepID=D2QGQ8_9SPHI Length = 384 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 110/336 (32%), Gaps = 32/336 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ + +A + R A L +R GP G+LQ D K+ ++ P Sbjct: 11 IIILVIFGITLLIATYSTYAERKVAAFLQDRLGPNRAGPWGLLQPIADAGKMFFKEDFIP 70 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP---------LPQLGDLITLLYLFAIA 107 AS W+F L P + + L + +P + ++ + + ++ Sbjct: 71 SQASKWLFILGPCLAMLTALMSSAVIPFGDSIRFDNYSIPVQGIEINIGVLYIFGVVSLG 130 Query: 108 RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW 167 + + G + + F+ +GA R A + E L L + + GS ++ I D + Sbjct: 131 VYGIMVGGWASNNKFSLLGAIRAASQNISYEIALGLSMIAILMMTGSLSVRAIVDQQASF 190 Query: 168 PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 L F E + PFDL E E EL G +EYS G + + Sbjct: 191 FEWNIFTQPLGFVIFLTCAFAECNRTPFDLPECETELVGGYHTEYSSMKLGFYLFAEYIN 250 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGLLL----------------ALVIAIVKLVVGVLVI 271 V ++ G L V+ K+ + Sbjct: 251 MFVSSAFVSALYFGGFHYPFMNEVGSALERSMGAITGHNIATAIGFVVFFGKIFFFIFFF 310 Query: 272 ALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 ++ R R D + W + V + A Sbjct: 311 MWVRWTLPRFRYDQLMNLGWKTLIPLSILNVVITGA 346 >UniRef50_C1D0H8 NADH-quinone oxidoreductase subunit H n=15 Tax=cellular organisms RepID=NUOH_DEIDV Length = 390 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 126/325 (38%), Gaps = 19/325 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++V+ + L L ++ + R R R GP G+LQ D IK + ++ Sbjct: 10 ITVVKAVAVILALLTTFAYMTLVERKLLGRFQIRVGPNRVGPMGLLQPAADAIKSIFKED 69 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL-------PQLGDLITLLYLFAI 106 + A V+ L P + +G+ LT +P GS ++ LL L ++ Sbjct: 70 LQVTLADKLVYTLAPIIAIGMALTAFGGIPAGPEGSLFGENPWVYNLDAGVLALLALTSM 129 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + + G +GS + +G R + + E + L + + GST ++I Sbjct: 130 GVYGIFLGGWASGSKYPMLGGLRSSAQMISYELGMGLSILGLLMLVGSTRFTDIVLWQGA 189 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 + L ++F E + PFDL EAEQEL G L+EYS + + + + Sbjct: 190 NG-WMILFQSLGFALFLISSFAETNRTPFDLVEAEQELVAGYLTEYSAIKWALFQMAEYV 248 Query: 227 KQLVVLQMFVGVFIPWGQMETF----TAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 + + +F + F G + ++ +VK+ + V ++ RLR Sbjct: 249 NMITASALMSTLFFGGWRGPGFLNGIIPGIADIPILWLVVKIGFFLFVFIWVRATLPRLR 308 Query: 283 LDITPRITWAGFGFAFLAFVSLLAA 307 D R W L L+A Sbjct: 309 YDQLMRFGWKLLLPLALFNTMLVAG 333 >UniRef50_Q47LF1 NADH-quinone oxidoreductase subunit H n=145 Tax=Bacteria RepID=NUOH_THEFY Length = 452 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 119/328 (36%), Gaps = 24/328 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ L + L ++ R R+ R GP G+LQ D +KL ++ Sbjct: 28 IILIKALAVFVFLMLCVLMMIMADRKVMGRMQQRHGPNRFGPWGLLQSLADGVKLSLKED 87 Query: 55 VGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 + P ++ P + + +PV + ++ +L Sbjct: 88 LIPRTVDKVIYIAAPMIAAIPAFFAFSVIPVGPEVTMFGVETRLQLTDLPVAVLLVLATA 147 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + ++G + SP+ +G R + + E + L AG+ + S I + Sbjct: 148 SLGVYGIVLAGWASRSPYPLLGGLRASAQVISYEIAMGLSFIAVFIYAGTLSTSGIVEAQ 207 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + + ++ L + E +LPFDL E E EL G ++EYS F + Sbjct: 208 QN--IWFAVILFPSFVIYLITMIGETNRLPFDLPEGEGELVGGFMTEYSSMKFTMFFLAE 265 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGL------LLALVIAIVKLVVGVLVIALFENSM 278 + + V M V +F+ + ++K V + + S+ Sbjct: 266 YVNMVTVSAMSVTLFLGGYLAPPPITTFWPGANEGWWPALWWLIKFVCVMFLFVWVRGSL 325 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSLLA 306 R+R D ++ W L +++ +A Sbjct: 326 PRVRYDQLMKLGWKILIPIQLVWITAVA 353 >UniRef50_A5CXG4 NADH-quinone oxidoreductase subunit H n=48 Tax=cellular organisms RepID=NUOH_VESOH Length = 357 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 119/312 (38%), Gaps = 14/312 (4%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG- 61 + L V + R + R GP G LQ D +KL+ ++ + P + Sbjct: 35 LLIPLMLVVAYFTYAERKVIGYMQLRIGPNRVGPKGWLQPIADALKLMTKEIIFPTKANI 94 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++F L P + + + + +P L+ +L + +I + ++G + S Sbjct: 95 YLFLLAPVLAIAPAIAVWAVIPFDESIYITNLDISLLYVLAIGSIGVYGIILAGWASNSK 154 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALC 180 + +GA R A L V E ++ L +AGS N++ I + IPL + Sbjct: 155 YPLLGALRSAALLVSYEIVIGFALVTVVMIAGSVNLNTIVQAQQGGIIYWYFIPLFPIMI 214 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 ++ +E + PFD+ E E E+ G EYSG F V +++ + V +F Sbjct: 215 IFFISSLVETNRAPFDVVEGESEIVGGTHVEYSGMTFAVFFLAEYANMILMAVLSVIMFF 274 Query: 241 PWGQMETFTA------GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + ++ + K + + + R R D ++W F Sbjct: 275 GGWHSPFEAIPYLESVFSWIPGMIWLLAKTTFFMFLYLWVRATFPRFRYDQIMHLSWKVF 334 Query: 295 GFAFLAFVSLLA 306 + ++ ++A Sbjct: 335 LPITIIWIFVVA 346 >UniRef50_Q0BSK9 NADH-quinone oxidoreductase subunit H n=5 Tax=cellular organisms RepID=NUOH_GRABC Length = 342 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 125/314 (39%), Gaps = 10/314 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ L L + L + + R A + R+GP G+LQ + D K+L +++ Sbjct: 18 ITALQALAILVPLMLMVAYATVFERKVLAAIGLRKGPNVVGPWGMLQAFADAGKMLLKET 77 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + PD A+ +F L P + + + +PV + ++ L + ++ + I Sbjct: 78 IIPDGANKVLFILAPLLTFILAMIAWAVVPVNDGWAVANINVGVLYLFAISSLGVYGVII 137 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +GA R A V E + + GS N++++ H + + Sbjct: 138 AGWASNSKYAFLGALRAAAQMVSYEVSIGFVMVAILLCVGSLNLNDVVLAQKH--VWFVL 195 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P++ + E + PFD+ E E E+ G + EYS + + G ++ Sbjct: 196 PMLPMAVIFFISGLAETNRSPFDIVEGESEIVAGHMVEYSAMAYALFFLGEYANMFMICA 255 Query: 234 MFVGVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 M +F+ + + ++K+ + V ++ R R D R+ W Sbjct: 256 MTTLLFLGGWLPPFDIVPLNWVPGPIWFVLKVCALMFVFFWVRGTVPRYRYDQLMRLGWK 315 Query: 293 GFGFAFLAFVSLLA 306 F L ++ L A Sbjct: 316 VFLPFSLVWLLLTA 329 >UniRef50_B5YKI6 NADH-quinone oxidoreductase chain h n=2 Tax=Bacteria RepID=B5YKI6_THEYD Length = 333 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 118/318 (37%), Gaps = 13/318 (4%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ +L + R + R GP G+LQ D++KL+ ++ + Sbjct: 10 AIVKTVVYFGILMLHVAYATYAERKIIGHIQLRLGPMVVGPHGLLQPIADVVKLIFKEDI 69 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P VFR P + + L+ +PV L+ ++ + I + S Sbjct: 70 IPIKVDRIVFRTAPLISLTAALSTFAVIPVDKNWVIADINVGLLYVIGIAGIGTYGIIFS 129 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-WPLSQSI 173 G + S + +G R A + E L L L +A S N++ I + W Sbjct: 130 GWASNSKYAFLGGLRSAAQMISYEVALGLSLVGVILMAESFNLTEIVNRQAELWYGMFLF 189 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++ A E +LPFDL EAE EL G EYSG F + L + Sbjct: 190 PQIIGYFVFVVAMLAETNRLPFDLPEAETELVAGYFVEYSGIRFSLFYLAEYLAMFCMSA 249 Query: 234 MFVGVFIPWGQMETF-----TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 + F + G++ +V ++K+ + + ++ R R D Sbjct: 250 LATICFWGGWTVPPILIKALPLLGVIPGIVWFLLKVYFHIFLFFWLRGTLPRYRYDQLMA 309 Query: 289 ITWAGFGFAFLAFVSLLA 306 I W L + + + Sbjct: 310 IGWKILIPLALLNIVVTS 327 >UniRef50_A0LEQ2 NADH-quinone oxidoreductase subunit H 1 n=5 Tax=Deltaproteobacteria RepID=NUOH1_SYNFM Length = 329 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 109/311 (35%), Gaps = 10/311 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ +I A L + R R+ R GP G+LQ D IKL+G++ + Sbjct: 13 IVGLVIILAFSQLNALFLVWLERKVAGRIQLRPGPMEVGPHGLLQTIMDGIKLVGKELIT 72 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P + +F L P ++ +L LP ++ + G Sbjct: 73 PRSVDRKLFILAPVLVFMPVLVGFLVLPFGPGLILRDMNVGILLIFSFSTFTVLAILAGG 132 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + + +GA R V E LLL + + S S I + Sbjct: 133 WASNNKYALLGAIRSVGQNVAYEIPLLLTVMSVVLMVNSMRFSEIVAAQGR--VWFIFLQ 190 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 +A E + PFD+ EAE EL G +EY+G FG+ +V + Sbjct: 191 PVAGLLYLICATAETNRAPFDIPEAESELVAGFHTEYTGMRFGLFFLAEYTNMFIVTAVA 250 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F F L +V ++K V + VI + R+R D +W Sbjct: 251 TSLFFGGWHGP-FGFDFGLPGVVWFLIKTYVLIFVIMWVRWTFPRIRFDQLMNFSWKFLI 309 Query: 296 FAFLAFVSLLA 306 L + + A Sbjct: 310 PVSLVNLVVTA 320 >UniRef50_B0SFU0 NADH-quinone oxidoreductase subunit H n=9 Tax=cellular organisms RepID=NUOH_LEPBA Length = 356 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 118/329 (35%), Gaps = 28/329 (8%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L V+ + R + +R GP G+ Q D IK + ++ + P Sbjct: 11 IKILSLFFVILTGVAYYTLAERKFAGFIQDRPGPNRAGPFGIFQPLADGIKFIAKEEIFP 70 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGS-----------------PLPQLGDLIT 99 + S ++ L P + + + +P ++ Sbjct: 71 KNVSKGMYLLAPTISMTCAIMAWAVIPFGGTLPAPEWLTTLTGVATIDLQIANPDSGVLY 130 Query: 100 LLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN 159 +L + +++ + I+G + + ++ +G R + E + L + + GS +++ Sbjct: 131 MLAISSLSVYGIMIAGWSSNNKYSLLGGVRSTAQMISYELPMGLSIVAIVIMTGSLKLTD 190 Query: 160 ITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 I+D+ S P +A A F E +LPFDLAEAE EL G +EY F + Sbjct: 191 ISDSQKDMWNILSPPGFVAFFIYVTAMFAETNRLPFDLAEAESELVVGFHTEYGAFKFAL 250 Query: 220 MKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG----LLLALVIAIVKLVVGVLVIALFE 275 + + + + +F + G + L I+K++ + Sbjct: 251 FFLAEYMNMITMSCLTTLLFFGGYNVPFQLGAGSEYQAFIGLGFFILKVLFFAFLFIWVR 310 Query: 276 NSMARLRLDITPRITWAGFGFAFLAFVSL 304 ++ R R D ++ W L V Sbjct: 311 WTLPRFRYDQLMKLGWKKMIPWGLFVVMF 339 >UniRef50_A3ZL02 NADH dehydrogenase I chain H n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL02_9PLAN Length = 434 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 127/321 (39%), Gaps = 24/321 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQS 54 +++ ++ V+ A + + R R+ +R GP G LQ D IKLL ++ Sbjct: 22 AIIQAVLLLHVIAVGAVVFIWMERKIAGRIQDRLGPTRTGGKFGWLQTLADGIKLLSKED 81 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A +F+L PY+ + T ALP + + L ++ + + F + Sbjct: 82 LMPRDADPLLFKLAPYISLAASFTAFLALPFASGWVGVRLNIALFFVIAVLGLEVFGVIL 141 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G +GS ++ G R+A V E L + + V ++G+ ++ I D + Sbjct: 142 AGYGSGSKWSLFGGMRQAAQVVSYEVPLGICVVVPVLISGTMDLVTIADQQSGLFSNWLF 201 Query: 174 PL----VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 +L + + PFDLAEAE EL G L+EYSG + + Sbjct: 202 FHDPFCMLLFWVYFTCGIASVNRAPFDLAEAESELVSGFLTEYSGIRWSLFFMAEYGSMF 261 Query: 230 VVLQMFVGVFIPWGQMETFTAGGL------------LLALVIAIVKLVVGVLVIALFENS 277 +V + +F + L+ L ++K V+GV+V+ + Sbjct: 262 LVSGLAAILFFGGWNGPIPIFFWVPEGNFTLETLANLVGLGNFLLKAVLGVVVMMWVRWT 321 Query: 278 MARLRLDITPRITWAGFGFAF 298 + RLR+D + Sbjct: 322 LPRLRIDQVISMCLKYCVPIA 342 >UniRef50_Q2YA20 NADH-quinone oxidoreductase subunit H 2 n=54 Tax=Proteobacteria RepID=NUOH2_NITMU Length = 366 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 113/320 (35%), Gaps = 16/320 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------------GVLQEYRDIIKL 49 +VL + L L L+ R + R GP G Q D +K Sbjct: 26 NVLLIVAIVLPLMLAVAYLTFAERKIIGYMQLRVGPNRVTFFGIPWLGGWAQPIADAVKA 85 Query: 50 LGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR 108 + ++ + P A+ +F L P + L +P L+ +L + ++ Sbjct: 86 VMKEIIIPSGANKVLFVLAPILTFAPALAAWAVIPFSPDVVLADINAGLLYILAMTSMGV 145 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-- 166 + I+G + S + +GA R A V E + L ++ S N+ +I Sbjct: 146 YGIIIAGWASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSQSLNLGDIVKGQQGAS 205 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 IPL + E + PFD+AE E E+ G EYSG F V Sbjct: 206 MLNWYLIPLFPMFLVYFISGVAETNRAPFDVAEGESEIVAGFHVEYSGMAFTVFFLAEYS 265 Query: 227 KQLVVLQMFVGVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDI 285 ++V + +F+ L+ + I+K + F + R R D Sbjct: 266 NMILVAMLASIIFLGGWLPPVNVAPFTLVPGFIWLILKASFLLFCFLWFRATFPRYRYDQ 325 Query: 286 TPRITWAGFGFAFLAFVSLL 305 R+ W F L ++ +L Sbjct: 326 IMRLGWKVFIPITLVWIVVL 345 >UniRef50_B8GA12 NADH dehydrogenase (Quinone) n=3 Tax=Chloroflexus RepID=B8GA12_CHLAD Length = 440 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 121/344 (35%), Gaps = 42/344 (12%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +L I +V + R AR+ +R GP G+ Q D +K+ ++ + Sbjct: 27 YILIVTIVLIVAPLQMLFFTYYERRVIARMQDRIGPNRVGPEGIWQPIADGVKMFTKEDI 86 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A V L P V+V + + +P +P+ L+ + +I+ ++ Sbjct: 87 VPQAADRIVHFLAPCVVVAPTVLMFAVVPWGPGMTPVDLPTGLLFFFAVSSISAVGLMMA 146 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-------- 166 G + + F+ +GA R V E +L L + GS +++ I Sbjct: 147 GWASNNKFSLLGAMRAVAQMVSYEIPAVLSLIAIVIIVGSLSLNEIIAYQSGLLISNRDL 206 Query: 167 --------WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 + +A A A E + PFD+ EA+ E+ G ++EYSG FG Sbjct: 207 PGIPDLGLGWFVFTPVGFVAFIAFFIAALAEGERTPFDIPEADSEIVAGYMTEYSGMKFG 266 Query: 219 VMKWGISLKQLVVLQMFVGVFIPWGQMET-------------------FTAGGLLLALVI 259 + + ++ + +F Q F +L + Sbjct: 267 LFYLAQYVLNFLLCAITAIIFFGGWQGPGVNWLYAQAITPANPNGNGVFNVLAGVLGVFY 326 Query: 260 AIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 ++K V V+ + RLR+D W LA + Sbjct: 327 FLLKTYVFFFVMVWLRGAFPRLRIDQLMDFGWKFLIPLTLANLF 370 >UniRef50_C0Z769 NADH-quinone oxidoreductase subunit H n=88 Tax=Bacteria RepID=NUOH_BREBN Length = 336 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 114/311 (36%), Gaps = 10/311 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ ++ V+ R + R GP G+LQ D+ KLL ++ + Sbjct: 19 IIAAVLLLAVVLGFVTYAIYFERKVIGWMQLRIGPNRVGPLGLLQTVADVAKLLLKEDIR 78 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F L P + + +P L+ + L I +G Sbjct: 79 PQHADKALFTLAPILAYAPAFAVLAVMPFTDSIRFADLGIGLLYYIALSGITVLGVITAG 138 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ IG R A + E L++ + + GS N+ +I + + +P Sbjct: 139 WASNNKYSLIGGLRSAAQMISYEVPLVMSVVGIVLLTGSMNLKDIVEAQRD--VWNIVPQ 196 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + A E+ + PFDL EAE EL G EYSG F + + + + Sbjct: 197 FIGFAVFIIAAQAELNRTPFDLPEAESELVGGYHVEYSGFRFAMFMLAEYVYMFGMGALI 256 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F + + + +V I+K V V + +M RLR+D W Sbjct: 257 TILFFGGW-LPIHPSLDFIPGIVWFILKFSVYVFLQFWIRATMPRLRVDQLMSFAWKVLL 315 Query: 296 FAFLAFVSLLA 306 L + L A Sbjct: 316 PVALFNILLTA 326 >UniRef50_Q9MGK1 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Chlorophyceae RepID=Q9MGK1_SCEOB Length = 324 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 111/306 (36%), Gaps = 10/306 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ L + L L+ + R + R+GP GVLQ + D +KLL ++ + Sbjct: 6 LIMILATVVPLLLAVAFLTLVERRVMGAMQRRQGPNAWGLFGVLQPFLDGLKLLLKEPIL 65 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P + +F P + ALP T G+ + +L + ++ + + G Sbjct: 66 PSSADQPLFLWAPILTFLTSQIAWAALPTSTAGAVRDLNLGTMYVLAVGSLGVYGILLRG 125 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +G R + E + L + A +A S N S + ++ + +PL Sbjct: 126 WRSNSKYAFLGCCRSVAQMISYELPMGLIVLCACMIANSLNWSALVESQQNG--IFLLPL 183 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E+ + PFDL EAE EL G EY+ GF + +++ + Sbjct: 184 WPLALIWIICCLAELNRAPFDLPEAEAELVAGYNVEYASMGFALFFIREYRSMIMMATVT 243 Query: 236 VGVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ L +K V + ++ R + + W Sbjct: 244 RLLFLGGTAAPMNLFFLNWLPGSFWLRLKATSVVFIYIWVRATLPRYKYSDLMDLGWKRL 303 Query: 295 GFAFLA 300 LA Sbjct: 304 LPLTLA 309 >UniRef50_C6VZV7 NADH dehydrogenase (Quinone) n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZV7_DYAFD Length = 359 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 107/334 (32%), Gaps = 33/334 (9%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-D 58 + + +A + R + +R GP G+LQ D K+ ++ P Sbjct: 13 IVAVFGLTLVIAMYSTWAERKVAGFIQDRSGPNRAGWGGLLQPLADAGKMFFKEDFIPAL 72 Query: 59 ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP---------LPQLGDLITLLYLFAIARF 109 A+ W+F P + + L + +P + + ++ + + A+ + Sbjct: 73 ANKWLFIAGPSLAMLTALLASAVIPFGSTFRINGHEVALQGVESNIGILYVFGVVALGVY 132 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL 169 + G + + F+ +GA R A + E + L L ++ S ++ I H Sbjct: 133 GIMVGGWASNNKFSLLGAIRAASQNISYEVAMGLSLIAILMMSSSLSLGEIV-AQQHGMN 191 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 L +F E ++PFDL E E EL G +EY G + + Sbjct: 192 WNIFYQPLGFIIFITCSFAECNRVPFDLPECETELVGGYHTEYGSMKLGFYLFAEYINMF 251 Query: 230 VVLQMFVGVFIPWGQMETFTA----------------GGLLLALVIAIVKLVVGVLVIAL 273 + + ++ L+ + K + V Sbjct: 252 ISSAIISVLYFGGYNYPGMDFVYDQLVKSFGTEVGHNIATLIGTAVFFGKALFFVFFYMW 311 Query: 274 FENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 ++ R R D + W + + + A Sbjct: 312 VRWTIPRFRYDQLMNLGWKKLIPLAIFNIIITGA 345 >UniRef50_Q6E7A5 NADH-ubiquinone oxidoreductase chain 1 n=82 Tax=Eukaryota RepID=Q6E7A5_SAPFE Length = 321 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 116/312 (37%), Gaps = 11/312 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L + L L + R + + R+GP G+LQ D +KL +++V Sbjct: 5 ILKTIALILPLLISVAYFTLAERKILSSIQRRKGPNVVGTFGLLQPLADGLKLFVKETVL 64 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +F P + + L +P S ++ LL + ++ + I+G Sbjct: 65 PSNCDVVLFIFAPILTFFLSLLSWVVIPFGKGMSYAELNIGILYLLAISSLGVYGIIIAG 124 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + V E + + S N+ +I + +PL Sbjct: 125 WSSNSKYAFLGALRSSAQMVSYELTIGFSILSVIVCTQSLNLIDIVLCQEK--IWYCVPL 182 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 ++ E + PFDL EAE EL G EYS GF + G L++ + Sbjct: 183 FPIFIIFFISSLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLLMSSLN 242 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ + + +K+ V++ L + R R D R+ W F Sbjct: 243 TILFLGGWLAPLY--LNFIPGPFWFGLKVSFFVILFVLARAILPRYRYDQLMRLGWKVFL 300 Query: 296 FAFLAFVSLLAA 307 L + L + Sbjct: 301 PFTLGWFILTCS 312 >UniRef50_A7BBX4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBX4_9ACTO Length = 442 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 121/327 (37%), Gaps = 23/327 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S++ + + L A L + R R+ R GP G+ Q + D KLL ++ Sbjct: 23 LSLIKAVFTIVFLIANVLLALWVERRGLGRMQTRPGPNVAGPLGLFQAFADAGKLLFKED 82 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL---------ITLLYLF 104 + A +++ L P + ++ +P+ L + +L + Sbjct: 83 MWTRRAERFLYFLAPAIAAFAAFSVYAVIPMGPNVKIFGHSTPLQLADMPVASLYILAIA 142 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + + G T S GA R + + E + L L ++GS + S I Sbjct: 143 SLGLYGIVLGGWSTRSTLPLYGAVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQ 202 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + + L A + E+ +LPFDL EAE E+ G ++EYS FG Sbjct: 203 GQF--WWAFTLFPAFVIYCISAVGEVNRLPFDLPEAEGEIVAGHMTEYSSMKFGWYYLSE 260 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFT-----AGGLLLALVIAIVKLVVGVLVIALFENSMA 279 + L V + +F ++ +K+ ++++ ++ Sbjct: 261 YVNMLNVSAVATTMFFGGWHAPWPLSHVEFLNSGWWGMLWFFLKIWFFMVLMIWTRATLL 320 Query: 280 RLRLDITPRITWAGFGFAFLAFVSLLA 306 R R D + W L ++ L+A Sbjct: 321 RFRYDQFMNLGWKRLMPIALGWLVLVA 347 >UniRef50_A5FKK0 NADH-quinone oxidoreductase subunit H n=8 Tax=Bacteroidetes RepID=NUOH_FLAJ1 Length = 350 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 110/318 (34%), Gaps = 25/318 (7%) Query: 14 FAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRL 66 +A + R A L +R GP G+LQ D +KL ++ P+ + ++F + Sbjct: 21 MIMAMYSTWAERKVAAFLQDRVGPNRAGWGGLLQPLADGMKLFSKEEFFPNTPNRFLFVV 80 Query: 67 TPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAISGLD 117 P + + L + +P L+ + + ++ + I G Sbjct: 81 GPAIAMSTALMTSAVIPWGDRLHLFGKDIILQATDVNIALLYIFGVLSVGVYGIMIGGWA 140 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 + + F+ +GA R A V E + L + + G+ ++ I++ L Sbjct: 141 SNNKFSLMGAVRAASQMVSYEIAMGLSMIALLMMTGTMSLKVISEQQAGMN-WNVFYQPL 199 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + +F E + PFDLAE E EL G +EYS G + + + Sbjct: 200 SFLIFLICSFAETNRTPFDLAECENELIGGYHTEYSSMKMGFYLFAEYASMFISSTIISV 259 Query: 238 VFIPWGQMETFTAG--------GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 +F LL + + VK+ + ++ R R D + Sbjct: 260 LFFGGYNYPGMQWMVDNVGVNTANLLGIAVLFVKICFFIFFYMWVRWTIPRFRYDQLMNL 319 Query: 290 TWAGFGFAFLAFVSLLAA 307 W + + + A Sbjct: 320 GWRILIPLSIINIMITGA 337 >UniRef50_B5SQ69 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Blastocystis sp. DMP/02-328 RepID=B5SQ69_9STRA Length = 330 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 112/303 (36%), Gaps = 11/303 (3%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVF 64 + ++ + R + R+GP G+LQ D +KL+ ++ + P + + ++F Sbjct: 18 PVLIGVAYMTLVEREILGSIQRRKGPNVVGPSGILQPLADGLKLMLKEIILPTNVNTFLF 77 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 L P + + LP+ + ++ + ++A + ++G + + + Sbjct: 78 ILAPVITFTGTMLYWAILPLSKGVTYTDFNVGVLFFYAISSLAIYGIILAGWASNTKYPF 137 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R V E + V GS N + I + + IPL Sbjct: 138 MGSIRSTAQMVSYELSIGTVFAVIFLCTGSLNFTKIVLAQQY--IWFCIPLFPLFIIFLI 195 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A E + PFDL EAE EL G +EYS GF + G +V+ + +F Sbjct: 196 ALLAECNRHPFDLPEAEGELVSGFNTEYSAMGFALFFIGEYGNIIVMSTLISILFCGGW- 254 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 + ++ +K+ + + + R R D RI W + Sbjct: 255 -LPLFGLTCIPGIIWLCLKICFFISFYVVVRGAYVRFRYDQLMRIGWKSLLPLCFGWFIF 313 Query: 305 LAA 307 ++ Sbjct: 314 ISG 316 >UniRef50_A0LJM4 NADH-quinone oxidoreductase subunit H 2 n=8 Tax=Bacteria RepID=NUOH2_SYNFM Length = 331 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 24/321 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + I VL VA L + R ARL R GP G+LQ DI+K++ ++ Sbjct: 12 IAKLTIVLAVLLLVAAYLVWLERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTV 71 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAI 106 P+ A +F L P V+ L + +P + L+ L ++ Sbjct: 72 PEGAERTIFMLAPAVVAATALLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSL 131 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 + A+ G + S ++ +G R A + E L L + A S ++ +I Sbjct: 132 GVYGVALGGWASNSKYSLLGGIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEK 191 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 +P + +A + E+ ++PFDL EAE EL G +EYSG FG+ G + Sbjct: 192 YP--FILTQPVAFAIFVISAMAEIKRIPFDLPEAENELGAGFHTEYSGMRFGLFFLGEYV 249 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 V+ + +F+ G LL +V +K+V+ L++ ++ RLR D Sbjct: 250 NMQVLGGLVAVLFLGGWH------GPLLPPVVWLFIKIVLVALIMIWVRGTLPRLRYDQL 303 Query: 287 PRITWAGFGFAFLAFVSLLAA 307 + W L + + A Sbjct: 304 MALGWKVLIPLALVNIMVTGA 324 >UniRef50_C1F217 NADH dehydrogenase I, H subunit n=3 Tax=Bacteria RepID=C1F217_ACIC5 Length = 402 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 111/313 (35%), Gaps = 14/313 (4%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L + + + L + + R R+ NR GP G+LQ D IK L ++ + Sbjct: 36 LLIIVPILAIFPGLFALTTVLERKGLGRMQNRFGPNRVGPLGLLQPVADGIKALTKEDIV 95 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A + L P V+V LP+ + ++ + + ++G Sbjct: 96 PRSADALLHFLAPVVIVCTAFLAYAVLPIGRNMIAVHLDAGILFFFAIGSATELAVFMAG 155 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW------PL 169 + + ++ +GA R + E L+L +AG+ + I + Sbjct: 156 WSSRNKYSLLGAMRAIAQMISYEIPLILSSVAVIMIAGTLSPEQIVTAQAGFTGIFPHWY 215 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 + A E + PFDL E E E+ G EYSG F + L+ Sbjct: 216 VFTPWGFAGFFLFMTAAAAETNRSPFDLPEGESEIIAGYFIEYSGFKFALFFLAEYLEIF 275 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 V + + +F+ F+ + + KL+V + ++ RLR+D Sbjct: 276 AVSGLGITLFLGGWSAP-FSFLTWIPSWCWFFAKLLVLIATFIWIRGTLPRLRMDQLMNF 334 Query: 290 TWAGFGFAFLAFV 302 W L + Sbjct: 335 AWKFMLPMTLLEI 347 >UniRef50_Q24UB9 NADH-quinone oxidoreductase subunit H n=16 Tax=Firmicutes RepID=NUOH_DESHY Length = 351 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 124/300 (41%), Gaps = 14/300 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M+++ ++ +V+ A LL + R R GP G Q D +KLLG++ Sbjct: 34 MTLIGMILIIVVIVISALLLIVLERKIAGWGSQRPGPNRLGPRGWFQTIADALKLLGKED 93 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P +A +F++ P + G+ + T +P + + + L + +++ + Sbjct: 94 LTPANADRIMFKIAPMFIFGIPILTLTIIPFGYAMTVIDLELGVFFYLGITSVSTLALLM 153 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ +G R + E L+ L + + N++ I + P Sbjct: 154 AGWSSNNKYSLLGGMRAVAQMISYEIPLIFSLLGVVMLTQTFNLTKIVEAQAALP--FIF 211 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 +A E+ + PFDL EA+QE+ GP +EY+G +G+ G + + Sbjct: 212 LQPIAFIIFLICGQAEVNRAPFDLLEADQEIIAGPFTEYTGLRWGLFYLGEYANLVAMCA 271 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + VF+ Q G+L +K+ + + + + R+R+D + W Sbjct: 272 LATTVFLGGWQGP-----GVLPGWAWFWLKVGLLIFISMWVRWTFPRIRIDHLMHLAWKV 326 >UniRef50_C9LCZ0 NADH dehydrogenase, H subunit n=9 Tax=Prevotella RepID=C9LCZ0_9BACT Length = 366 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 114/314 (36%), Gaps = 17/314 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 SV+ LI + A L + R R GP G+LQ + D+ K+L ++ + Sbjct: 33 SVIVALIIITLYAVFAIALIYMERKVCGFFQCRLGPNRVGKWGLLQVFGDVFKMLTKEII 92 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 ++ + P+++V + LP G + + + + +I ++ Sbjct: 93 RMRNSDRLLHDFAPFLVVVASMLTFACLPWNKGGHIIDFNIGIFFFIAVSSIGVVGILLA 152 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS-- 172 GL + + ++ IGA R + E + L + + G+ IS I Y + Sbjct: 153 GLSSNNKYSLIGAMRSGAQLISYEVSIGLTMLTMVAMTGTMQISEIVQQQYDNGWNIVRG 212 Query: 173 -IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 IP + A A E + PFDL E E EL G +EYSG FG L + Sbjct: 213 HIPALFAFIIYMIAGNAECNRGPFDLPEGESELTAGYHTEYSGMHFGFYYLAEYLNLFIT 272 Query: 232 LQMFVGVFIPWGQM-------ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 + +F+ A + + + K V ++ + RLR+D Sbjct: 273 AGIAATLFLGGWAPLHIPGLEGFNIAMDYVPGAIWFVGKTFFVVFLLMWERWTFPRLRID 332 Query: 285 ITPRITWAGFGFAF 298 + W Sbjct: 333 HILSLEWKYLMPLS 346 >UniRef50_A9B482 NADH dehydrogenase (Quinone) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B482_HERA2 Length = 413 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 125/316 (39%), Gaps = 16/316 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 S++ + + L+ R A + + +RRGP G+LQ + IK + ++ Sbjct: 20 SIIKVTLILVGGSVGMMFLTWYERRAISYMQDRRGPNRVGPQGLLQPISEAIKTMTKEDA 79 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P +A V L P VM+G + +P + P+ ++ ++ + ++ Sbjct: 80 TPREADRIVHFLAPVVMLGATVLSFAVIPWGRMF-PVDLNAAVLFVIATGGLHSIGMMMA 138 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW----PLS 170 G + + F +G R + E ++ + + GS ++ I + + Sbjct: 139 GWGSNNKFALLGGMRGVAQLISYEIPQVMAIIPVVLMTGSMSLQKIVEAQNDFGGLGWFV 198 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 S +L A+ E + PFD+ EA+ E+ G ++EYSG F V + L Sbjct: 199 FSPVGLLGFALFFTASLAEGERTPFDIPEADSEIIAGYMTEYSGMKFAVFYLSNYMSNLA 258 Query: 231 VLQMFVGVFIPWGQMETFTAG----GLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 V + +++ G A G LL+L+ ++K ++ L ++ RLR+D Sbjct: 259 VCFITATLYLGGGNGPGVDALGGFAGGLLSLIYFLLKSFALFFIMVLIRATVPRLRVDQL 318 Query: 287 PRITWAGFGFAFLAFV 302 W L + Sbjct: 319 MGFAWKFLLPLVLVNI 334 >UniRef50_UPI0001C31279 NADH dehydrogenase (quinone) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31279 Length = 348 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 18/314 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ ++ LV F + PL + R R+ R GP G LQ DI KLL +Q Sbjct: 22 IQIIKAVVIFLVGFTLVPLALMLDRKLMGRMQMRYGPNRVGPFGALQPMADIGKLLFKQQ 81 Query: 55 VGPDAS-GWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLF 104 P S G++F + P + + A+P ++ + Sbjct: 82 FRPRTSVGFLFAVAPAISMVCAAAAFAAIPFGDTVDIFGAKVGLYGIDVSIGILYIFAWS 141 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 A++ + + G +GS ++ +GA R A + E + L L AG+ +++ I + Sbjct: 142 ALSVYGLMLGGWASGSKYSFLGAMRSAAQLISYEVSMGLSLIGVVITAGTLSLTGIVEAQ 201 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 IP + C A F E G+ PFDL+EA+ EL G +EY G F Sbjct: 202 AGM--WYIIPQFIGFCIFLVAAFAETGRPPFDLSEADAELVGGYSTEYGGGRFASYYAAE 259 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 ++ + V +F + + ++ +VK V+ + V + R R D Sbjct: 260 YFHMVIASAIAVTMFFGGWMLPFGIDPPQWVDPIVVLVKTVLVICVFVWARTTFPRPRYD 319 Query: 285 ITPRITWAGFGFAF 298 + W Sbjct: 320 QLMSLGWKILLPLA 333 >UniRef50_D2QWK6 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWK6_9PLAN Length = 455 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 120/333 (36%), Gaps = 34/333 (10%) Query: 8 IQALVLFAVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVGPD-A 59 + V+ A + + R R+ +R GP G LQ D +KL+ ++ V P A Sbjct: 39 LLIQVVAVGALVFIWMERKIAGRIQDRLGPTRVGGKFGWLQTLADGLKLIAKEDVTPKDA 98 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 +F+L PYV T ALP + + ++ + + F ++G +G Sbjct: 99 DRLLFKLAPYVSFAASFTAYMALPFSSGWVAQDVNIGVFFIVAVLGLEVFGVILAGYASG 158 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLA- 178 S ++ G REA V E + + + + + G+ N+ I D W + I Sbjct: 159 SKWSLFGGMREAAQVVSYEVPIGMCIVIPVVILGTMNLVTIGDMQAGWFTNWLIFNDPFT 218 Query: 179 ---LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + PFDLAEAE EL G +EYSG + +V + Sbjct: 219 FAVFFVYFTCATASVNRAPFDLAEAESELVAGFHTEYSGLRWSFFFMAEYGSMFLVSGLA 278 Query: 236 VGVFIPWGQMETFTAGGLLLAL---------------------VIAIVKLVVGVLVIALF 274 +F G +L V I K V+ V V+ Sbjct: 279 AILFFGGWNGPIPLFGPEMLGWAYTPESTSWSILGYIATLAGCVNFIGKTVLFVTVMMWV 338 Query: 275 ENSMARLRLDITPRITWAGFGF-AFLAFVSLLA 306 ++ RLR+D + A F+ +A Sbjct: 339 RWTLPRLRIDQVMTVCLKYCVPLAAFCFIGAVA 371 >UniRef50_B2I791 NADH-quinone oxidoreductase subunit H n=351 Tax=cellular organisms RepID=NUOH_XYLF2 Length = 363 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 117/324 (36%), Gaps = 19/324 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----GVLQEYRDIIKLLGRQSVG 56 +VL L+ A+ L R +H R GP G+ Q + D+ KLL ++ + Sbjct: 28 TVLKILMIAIPLIVSVAFYVVWERKLIGWMHVRHGPMYVGMGLFQAFADVFKLLFKEVLY 87 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F + P + + +P T L+ LL + ++ + ++G Sbjct: 88 PSKAHKAIFVIAPLLTLAPSFAAWAVVPFDTKLVLSNANVGLLYLLAMTSLGVYGIILAG 147 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---YHWPLSQS 172 + S + +GA R A V E + L AGS N+S I + Sbjct: 148 WASNSKYAFLGAMRSAAQVVSYEIAMGFALVGVMIAAGSLNLSQIVMAQAGSSGFFDWFL 207 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 IPL + E + PFD+ E E E+ G + EYSGS F + ++V Sbjct: 208 IPLFPLFIVYWVSGVAETNRSPFDVVEGESEIVAGHMVEYSGSVFALFFLAEYANMILVS 267 Query: 233 QMFVGVFIPWGQME----------TFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 + F+ ++K++ F S R R Sbjct: 268 FLISIFFLGGWLSPIQGWVSGQVSPLIDWVWNGGWPWLLLKVLFFASAYIWFRASFPRYR 327 Query: 283 LDITPRITWAGFGFAFLAFVSLLA 306 D R+ W F + ++++ A Sbjct: 328 YDQIMRLGWKVFIPLTIVWIAVTA 351 >UniRef50_P03886 NADH-ubiquinone oxidoreductase chain 1 n=4260 Tax=Metazoa RepID=NU1M_HUMAN Length = 318 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 120/314 (38%), Gaps = 15/314 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + L+ + + L R + R+GP G+LQ + D +KL ++ Sbjct: 1 MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEP 60 Query: 55 VGPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P S ++ P + + + L + T LP+ + L+ +L ++A + Sbjct: 61 LKPATSTITLYITAPTLALTIALLLWTPLPMPN--PLVNLNLGLLFILATSSLAVYSILW 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG + S + IGA R + E L + L ++GS N+S + T H L Sbjct: 119 SGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPS 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + +T E + PFDLAE E EL G EY+ F + +++ Sbjct: 179 WPL--AMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNT 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ T+ A L + K ++ + + R R D + W Sbjct: 237 LTTTIFLG----TTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKN 292 Query: 294 FGFAFLAFVSLLAA 307 F LA + + Sbjct: 293 FLPLTLALLMWYVS 306 >UniRef50_Q1GIN0 NADH-quinone oxidoreductase subunit H n=44 Tax=cellular organisms RepID=NUOH_SILST Length = 345 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 110/316 (34%), Gaps = 13/316 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + + L + L R A + RRGP G+LQ D +K + ++ Sbjct: 14 IILAQTLAVVAFVMISLLFLVYGDRKIWAAVQMRRGPNVVGVYGLLQTVADALKYVVKEV 73 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V P + VF L P + + +P ++ + + ++ + + Sbjct: 74 VIPAGSDRTVFILAPLTSFVLAMIAWAVIPFNDTWVLSDINVAILYVFAVSSLEVYGVIM 133 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV---YHWPLS 170 G + S + +G+ R A + E + L + GS N +I Sbjct: 134 GGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFGDIVRAQDGDAGLFNW 193 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 +P + + E + PFDL EAE EL G EYS + F + G + + Sbjct: 194 YWLPHFPMVFLFFISCLAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIFL 253 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + + +F + + + K+ + A+ + R R D R+ Sbjct: 254 MCALTSLLFFGGWLSPVPFLPD---SPLWMVAKMAFFFFLFAMVKAITPRYRYDQLMRLG 310 Query: 291 WAGFGFAFLAFVSLLA 306 W F L +V +A Sbjct: 311 WKVFLPFSLIWVVFVA 326 >UniRef50_A5WG42 NADH-quinone oxidoreductase subunit H n=222 Tax=cellular organisms RepID=NUOH_PSYWF Length = 348 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 110/299 (36%), Gaps = 8/299 (2%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 A L+ R A +R GP G LQ D++K+ ++ P A ++F L P Sbjct: 43 AALMIIYERRMLALWQDRYGPNRVGPWGSLQLVADMLKIFFKEDWTPKFADKFMFILAPA 102 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 V + L +PV + ++ + +A + G + + ++ +G R Sbjct: 103 VAMFTALASFAIIPVSPMLGVADWNIGILFFFAMAGMAVYAVMFGGWASQNKYSLLGGLR 162 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPLVLALCACAFATFI 188 A + E L L L + GS N+ +I P L A Sbjct: 163 SAAQTISYEVFLGLSLMGVVAMTGSFNLRDIVVAQQGGFWHWNIFPQFLGFLTFVVAGVA 222 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF 248 + PFD EAEQEL EG EYSG FG+ G + +++ + +F Sbjct: 223 VTHRHPFDQPEAEQELAEGYHVEYSGMKFGMFFIGEYVNVVLISALMTCLFFGGWDAPLN 282 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 +L ++K + + + L S+ R R D W L + + AA Sbjct: 283 LGFTILPPAFWFMIKTLFFMTMFVLARGSLMRPRYDQVMNFGWKVCLPVTLINLMITAA 341 >UniRef50_C1ZAT3 NADH dehydrogenase subunit H n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAT3_PLALI Length = 419 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 119/336 (35%), Gaps = 36/336 (10%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSV 55 +++ L+ V + R R+ +R GP G LQ D IKL+ ++ + Sbjct: 29 LIHTLLLFHVFAVSPAFFIWLERKVSGRIQDRLGPTRVGGKFGWLQSVADGIKLIQKEDL 88 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A W+FRL PY+ + T+ LP + + + L + ++ ++ Sbjct: 89 APAAADQWLFRLAPYLALVASFTVFMVLPFSRGWAAVVIESSVFLALAIISLEVLGIILA 148 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G +GS + G+ REA V E L L + G+ N I + + L+ + Sbjct: 149 GWSSGSKWALFGSMREAAQMVSYEIPLALCALIPVMAVGTLNFVTIAEVQSGFFLTNWLI 208 Query: 175 L-----VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 +A + + PFDLAEAE EL G +EYSG + L Sbjct: 209 FHDPFTFVAFFVYFTVAIASVKRAPFDLAEAESELVAGFHTEYSGMRWSYFFLAEYASML 268 Query: 230 VVLQMFVGVFIPWGQMETFTAGGL-----------------------LLALVIAIVKLVV 266 V + V +F+ T L LL I + K + Sbjct: 269 SVSCVAVLLFLGGWWSGTGLEDLLAPVRNWGQNFPVQGFSAGNYALNLLGAHIFLFKASL 328 Query: 267 GVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 V V ++ RLR+D A Sbjct: 329 LVTVQIWVRWTLPRLRIDQVMTTCLKYLIPISCALF 364 >UniRef50_UPI00016C3DD3 NADH dehydrogenase subunit 1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DD3 Length = 400 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 111/309 (35%), Gaps = 20/309 (6%) Query: 15 AVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLT 67 A L R AR+ +R GP G+LQ D +KL+ ++ V P A +FR Sbjct: 35 LSAFLGIWAERKVSARMQDRLGPTRVGPFGLLQSLADGVKLIAKEDVAPQAADKLLFRAA 94 Query: 68 PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGA 127 PY+ ALP + +L + + F ++G + S ++ G Sbjct: 95 PYIAFCASFCGFLALPFGSQFVAQNLSVGAFFVLAVLSSEVFGIVLAGYASASKWSLFGG 154 Query: 128 SREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL----ALCACA 183 REA V E + + V +AG+ N++ I W + ++ A Sbjct: 155 VREAAQVVSYEVPRAMCVVVPVCLAGTLNLNTIGAQQVGWFWNWNVFHDPFTFVAFFVFF 214 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 + PFDLAEAE EL G +EYSG + V + +F+ Sbjct: 215 ITAVASCKRAPFDLAEAESELVAGFHTEYSGIRWSYFFLAEYGSMFAVSGLAALLFLGGW 274 Query: 244 QMETFTA---------GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 G +L + + + K VLV+ S+ RLR+D F Sbjct: 275 HSGVLPFEPSVEFGFWPGTVLNVAVFVGKCWALVLVMIWMRWSLPRLRIDQVMTTCLKYF 334 Query: 295 GFAFLAFVS 303 + Sbjct: 335 LPISCVLLI 343 >UniRef50_Q3ZXR7 NADH-quinone oxidoreductase subunit H n=10 Tax=Bacteria RepID=NUOH_DEHSC Length = 353 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 16/311 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++Y +I + + + R R R GP G+LQ D IK+L ++ + Sbjct: 9 LVYLVILFGFVIVSVLIFIWLERRLIGRFQLRPGPNRAGPFGLLQPIADAIKVLIKEDII 68 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +A VF L P V ++ + A+P + ++ +L + ++ ++G Sbjct: 69 PSEADKGVFWLAPLVAFVPVMLMFAAIPFADGVMLVDLNIGILYILAVSSVTVIGIFMAG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ +GA R V E L+L + + GS +++ I + + Sbjct: 129 WSSNNKYSLLGAMRTIAQEVSYEIPLVLSILGVVMLTGSLSMNEIVKAQ---DVPFILLQ 185 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L A E+ + PFDL EAE E+ G +EYSG FG+ + L V + Sbjct: 186 PLGFFVYLSAAMAEVNRTPFDLLEAESEIIAGFHTEYSGMKFGLFYLMEYAEVLAVSAIA 245 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ Q G LL + I K+++ + I ++ RLR+D W Sbjct: 246 TTLFLGGWQ------GPLLHPVFWFIAKILLVFMFIIWVRATLPRLRIDQVMAFGWKFLL 299 Query: 296 FAFLAFVSLLA 306 LA + + A Sbjct: 300 PLSLANLVITA 310 >UniRef50_Q67KP0 NADH-quinone oxidoreductase subunit H 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH2_SYMTH Length = 394 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 118/346 (34%), Gaps = 44/346 (12%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 VL + + L + R A + NR GP G +Q D+IKL ++ + Sbjct: 19 VLKASLILVWGLINFYLCLMLERKLSAWMQNRVGPWRVGLWGWIQPVADLIKLWVKEYIR 78 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P+ W++ + P++ + +P +I + + ++G Sbjct: 79 PNNVDKWLYLIAPFIGFVSANLVWLIVPFGDKLIATDFEIGIIFIAAVMGYDVIATFMAG 138 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSI 173 + + ++ +GA R A + E +++ + +AGS +S+I Sbjct: 139 WGSNNKYSMLGAMRGAAQLISYEVTMVMAVIGVVMMAGSLRLSDIVLAQQQRGFLGWFLF 198 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++ A+ E+ + PFDLAEAEQEL G +EYSG + + + Sbjct: 199 PQIIGFIVYLIASLAELNRAPFDLAEAEQELVAGHHTEYSGFRWAMFMLAEYIHLAAWSA 258 Query: 234 MFVGVFIPWGQMETFT-----------------------------------AGGLLLALV 258 + +F+ T + + Sbjct: 259 IAATLFLGGWSGPTLGQVAAGLGNVLNGFGAFTNPVGTAVLNWGLAISGSTILNWVAGVF 318 Query: 259 IAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 ++K V + ++ R+R+D + W + + L Sbjct: 319 WLVLKTYFFVFLAMWIRWTLPRVRIDQLMDLGWKFLLPVSMFNIFL 364 >UniRef50_Q2RYV5 NADH-quinone oxidoreductase subunit H n=3 Tax=Rhodothermaceae RepID=NUOH_SALRD Length = 345 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 74/325 (22%), Positives = 127/325 (39%), Gaps = 22/325 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 L + + A LL R A + NR GP G+LQ + D++K + ++ V P Sbjct: 10 LGAFLVINAMLLSASLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDVQP 69 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 ++ ++ + P VMV + +T A+ +P +I LL L +I+ + ++G Sbjct: 70 AQSNKFIHSMAPVVMVVIAMTTASLIPFAEGVVVADLNVGVIMLLALTSISVYGVTLAGW 129 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL---SQSI 173 + S F+ +G R A V E + L + +AGS N I + ++ Sbjct: 130 SSNSKFSLLGGLRSAAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWNAV 189 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + F E + PFDL EAE+EL G +EYSG FG+ + + Sbjct: 190 RNPIGCLIFIVTAFAETNRAPFDLPEAEEELVAGYHTEYSGMKFGMFFLAEYVNWFIASF 249 Query: 234 MFVGVFIPWGQMET------------FTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 V +F + + LL V ++K+ V + R Sbjct: 250 FIVTLFFGGYLVPLEPQLIALFPALEGSTLLALLQFVSLMLKVSFFSFVFIWVRWTFPRF 309 Query: 282 RLDITPRITWAGFGFAFLAFVSLLA 306 + + ++ W LA L+A Sbjct: 310 KYNQLMKVGWKYLLPIALANAILIA 334 >UniRef50_C1ZFV5 NADH dehydrogenase subunit H n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV5_PLALI Length = 390 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 125/328 (38%), Gaps = 24/328 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ + L L + R A + +R GP G+LQ D K L ++ V Sbjct: 9 TLITIGVAFGGLMGTIAYLILVERRLAAFIQDRYGPNRVGWAGLLQPIADGAKFLLKEDV 68 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVT---------VGSPLPQLGDLITLLYLFA 105 P + ++ L P + V + +P +I + + + Sbjct: 69 IPGYVNKTLYILGPSIAVFTAMAGFAIVPFGPVDQAPSWMRFVIAPDVNIGMIYIFCVGS 128 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 + + + G + + ++++G+ R + V E L + + + S ++++I Sbjct: 129 LGVYGVILGGWASNNKYSSLGSMRASAQVVSYEIPLGMSIIGVVLMTSSLSLNDILMHQA 188 Query: 166 HWPL--SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG 223 + + LAL + E +LPFDL+E EQEL G +EYS F + G Sbjct: 189 NQGVLGWNVWTQPLALLIFFVSALAETNRLPFDLSECEQELVGGFHTEYSSMKFALYFLG 248 Query: 224 ISLKQLVVLQMFVGVFIPWGQMETF------TAGGLLLALVIAIVKLVVGVLVIALFENS 277 + V + +F Q G L+ +V+ + K+++ +L+I + Sbjct: 249 EYAHIITVCFLTAILFFGGWQFPLIAEADSAYLGATLVKVVVLLTKVLMIILLIMFIRWT 308 Query: 278 MARLRLDITPRITWAGFGFAFLAFVSLL 305 + R R D + W G + ++ Sbjct: 309 IPRFRFDQLMNLAWLGLIPMAAMNILVV 336 >UniRef50_C8PVU9 NADH-quinone oxidoreductase subunit h n=5 Tax=Gammaproteobacteria RepID=C8PVU9_9GAMM Length = 351 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 117/312 (37%), Gaps = 9/312 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + ++ L + A L+ R A +R GP G LQ D++K+ ++ P Sbjct: 31 VQSIVIFLAVVIFAALMIPYERRMLALWQDRYGPNRVGWQGSLQVAADMLKIFFKEDWTP 90 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 A ++F L P + + L +PV ++ + +A + G Sbjct: 91 KFADKFIFVLAPAISLFTALAAYIIVPVTPSLGGADWSIGILFFFAMAGLAVYAVMFGGW 150 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL-SQSIPL 175 + + + +G R A + E L L L +AGS N+ +I + Sbjct: 151 ASANKYALLGGLRSAAQTISYEVFLGLSLMGVVALAGSFNLRDIVYSQAGGFWHWNVFGQ 210 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 +L A + PFD EAEQEL EG EYSG FG+ G + ++V + Sbjct: 211 ILGFLTFMVAGVAVTHRFPFDQPEAEQELAEGYHVEYSGMKFGMFFVGEYVNIVLVSSLI 270 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F + F + ++ ++K + + + L ++ R R D W Sbjct: 271 TILFFGGW-LPLFDGLSFIPPIIWFMLKTLFFMTMFVLARGALMRPRYDQVMNFGWKICL 329 Query: 296 FAFLAFVSLLAA 307 L + AA Sbjct: 330 PITLINLLATAA 341 >UniRef50_Q0H8X5 NADH-ubiquinone oxidoreductase chain 1 n=17 Tax=Fungi/Metazoa group RepID=NU1M_USTMA Length = 331 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 123/315 (39%), Gaps = 13/315 (4%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPG------VLQEYRDIIKLLGRQSV 55 ++L L+ + + ++ I R + R GP +LQ + D +KL+ ++ V Sbjct: 7 NLLEILVVLVPILLSVAFMTVIERKVMGSMQRRIGPNVVGYYALLQPFADALKLVIKEQV 66 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A+ +F L P V + L +P+ + ++ L L +I + + Sbjct: 67 IPSQATKSLFFLAPMVTLIFSLLGWGVIPLGPGLALSDFSLGILYSLALSSIGVYGILFA 126 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G S + +G+ R + E + + + G+ NI+ I ++ + +P Sbjct: 127 GWSANSKYAFLGSLRSTAQMISYELIYSAAVLAVILLCGTFNITEIIESQQS--VWYIMP 184 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L+ + E + PFDL EAE EL G ++E+SG F +++ Sbjct: 185 LLPIFILFFVSALAETNRTPFDLPEAESELVAGFMTEHSGMIFVFFFLAEYGSIVLMSTF 244 Query: 235 FVGVFIPWGQMETFTAG----GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 +F+ M + L + VK V+ + + ++ R+R D Sbjct: 245 TAILFLGGYNMSPQVLFAEDSFINLQSIALAVKAVLIMFLFVWIRATLPRMRYDSLMTFC 304 Query: 291 WAGFGFAFLAFVSLL 305 W G +A + L+ Sbjct: 305 WTGMLPVAIALLILV 319 >UniRef50_A6FCP5 NuoH2 NADH chain H n=1 Tax=Moritella sp. PE36 RepID=A6FCP5_9GAMM Length = 328 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 111/300 (37%), Gaps = 22/300 (7%) Query: 21 SGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVG 73 + + R + R GP G+LQ D IKLL ++ P A +F++ P V + Sbjct: 29 TWLERKIAGHIQQRPGPMRVGWHGLLQPVADGIKLLTKEDHIPSAADRTLFKMAPVVALV 88 Query: 74 VMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 + A+P+ + L+ +L + I F ++G + S + Sbjct: 89 PPFVVFVAIPLGEPVTIFGTEVMLSLSNMNVGLLFILAVSGIGIFGTILAGWASNSKYAV 148 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R + E + + +A S N+ +I + L Sbjct: 149 LGSLRAIAQMISYEIPMGFSVIGVVMLANSMNMMDIVTAQKDM--WNVVYQPLGFFVFFV 206 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A E+ ++PFDL EAE +L G +EYSG F L +++ + V +F Sbjct: 207 AGLAEVQRIPFDLPEAEGDLGAGYHTEYSGIRFSFFMLSEYLGVVIIGFLNVMLFFGGWH 266 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 A + V ++K+ + V F + R R D I W L + + Sbjct: 267 ----GAPPFIPDTVWLLLKVGFFIWVFMWFRFTFPRYRYDQLMAIGWKVLLPLSLVNILI 322 >UniRef50_Q1IS40 NADH-quinone oxidoreductase subunit H 2 n=15 Tax=cellular organisms RepID=NUOH2_ACIBL Length = 354 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 127/338 (37%), Gaps = 33/338 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ VL + R R+ NR GP G+LQ D +K + ++ + Sbjct: 11 ALIKVVLVIFVLLTAVAYTVWLERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDL 70 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGS-------------------PLPQLG 95 P + ++ L P + V + L + +P + P+ Sbjct: 71 LPPHVNKPLYILAPMLAVAMALLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINI 130 Query: 96 DLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGST 155 L+ +L + +I + A++G + S ++ +G+ R + V E L L L ++GS Sbjct: 131 GLLIILGVTSIGVYGIALAGWSSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSF 190 Query: 156 NISNITDTVYHWPLSQSIP---LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEY 212 ++ I + +I +A + + E ++PFDL EAE EL G +EY Sbjct: 191 SLREIVRLQQGGFWNWNIFGGFQFIAFFIYLTSAYAETNRIPFDLPEAETELVAGYHTEY 250 Query: 213 SGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLL----ALVIAIVKLVVGV 268 S F + + V + +F+ +L + +++ + Sbjct: 251 SSMKFAMFFMAEYANMVTVACIASILFLGGWSGPVPGFLPPILQSLVPVFWFCLRIFAFL 310 Query: 269 LVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 + ++ R R D +W +A + + A Sbjct: 311 FIYIWVRGTLPRFRYDQLMAFSWKFLLPLSIANIMVTA 348 >UniRef50_A5UXK5 NADH dehydrogenase (Quinone) n=3 Tax=cellular organisms RepID=A5UXK5_ROSS1 Length = 452 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 120/363 (33%), Gaps = 62/363 (17%) Query: 3 VLYPLIQALVLFAVAP---LLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ 53 + Y ++ +VLF L+ R AR+ +R GP G+LQ D +K+ ++ Sbjct: 21 IAYLIVTTIVLFYAVGNFILMVWAERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKE 80 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 + P +A WV L P V + + + +P P+ L+ ++ + A++ Sbjct: 81 DIVPRNADRWVHLLAPVVSLAPVAMMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLM 140 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH------ 166 ++G + + F +GA R V E + L +AG ++ N+ Sbjct: 141 MAGWGSNNKFALLGAMRAVAQLVSYEIPAVTALLTVVVLAGGMSLLNLPHLQAGVPIMGA 200 Query: 167 ------------------------------------WPLSQSIPLVLALCACAFATFIEM 190 + +L A E Sbjct: 201 TILCNDPAGCSPLLYTTITSFPGSPNEPVQALDLGLGWWVFTPVGLLGFVVFFIAALAEG 260 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFD+ EA+ E+ G ++EYSG F + + + F+ Q A Sbjct: 261 ERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQYILNFALAALAATAFLGGWQGPGVAA 320 Query: 251 G----------GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 L+ + K+ + V+ + RLR+D W L Sbjct: 321 LANMGGPWVHAAAALSAFYLLAKIWILFFVMIWLRGAFPRLRVDQLMDFAWKLLLPLALV 380 Query: 301 FVS 303 + Sbjct: 381 NIV 383 >UniRef50_B2BRP7 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Hexactinosida RepID=B2BRP7_9METZ Length = 316 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 119/301 (39%), Gaps = 15/301 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ ++ L + L+ I R A R+GP G+LQ D IKL+ +++ Sbjct: 2 IIIMQSILTLLTILITTAYLTLIERKILASRQIRKGPNIVGIYGLLQPIADAIKLIIKET 61 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + + +F L+P + + + LT + +P+ +I +L L ++ + + Sbjct: 62 IKHHKTTKTLFLLSPALAIIIALTAWSIIPLDYKHPQRNPKLGIIIILALSSLRIYTILL 121 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG S + +G+ R + E + + + ++ N+ I + + Sbjct: 122 SGWARNSKYALLGSIRATAQMIRYEVCIGIIILTIVSLSRRLNLRQIRMCQQK--IWYIL 179 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL E + PFDL E E EL G EYS F ++ + L++ + Sbjct: 180 PLFPIFIMFTIRRIAETNRTPFDLTERESELVSGFNVEYSAILFTLLFLAEYINILLMAR 239 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ + + +L +K++ + + AR+R D + W Sbjct: 240 IIRILFLRGRTFLSVSNPRILA------IKIIRISYLFICIRATFARIRYDQLMNLLWKR 293 Query: 294 F 294 + Sbjct: 294 Y 294 >UniRef50_B9XHI2 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B9XHI2_9BACT Length = 381 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 117/346 (33%), Gaps = 41/346 (11%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP---------------------GVL 40 S + I V+ + + R A + +R GP G+ Sbjct: 24 SFVKIAILVGVVLTMVAYAVLVERKVSAFIQDRVGPNRAAPPFIAAIPVLGPFLVRLGIF 83 Query: 41 QEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTV-----GSPLPQL 94 Q D +K L ++ P F L P + + L +P + Sbjct: 84 QPLADGLKFLLKEDFTPAHVRKIYFWLAPMIAMVPALLTFAVIPFGSNLGGQRMVIADLN 143 Query: 95 GDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGS 154 ++ + ++ + ++G S + +G R + + E + + + + G+ Sbjct: 144 VGILYTFGIVSLGVYGIVLAGYAANSKYPFLGGIRSSAQLISYEIAMGMSVIPVFMLVGN 203 Query: 155 TNISNITDTV-------YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 N+S + P L+ A F E +LPFDL EAE EL G Sbjct: 204 LNLSGVIHYQTGGLFGISWLPNWLLFKQPLSFIIFIIAAFAETNRLPFDLPEAETELVAG 263 Query: 208 PLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT-------AGGLLLALVIA 260 +EYS F + G + M V +F+ + F G LL + I Sbjct: 264 YHTEYSSMKFALFFLGEYANMIASSAMMVTLFLGGWTLPWFGLDQPADSIGIGLLHIGIF 323 Query: 261 IVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 I K+++ +L+ R R D + W F LA + + A Sbjct: 324 IGKIILLMLIFIWIRWMFPRFRYDQLMDLGWRRFIPLALANILITA 369 >UniRef50_Q2K3T6 NADH-quinone oxidoreductase subunit H 2 n=9 Tax=Rhizobiaceae RepID=NUOH2_RHIEC Length = 340 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 110/300 (36%), Gaps = 22/300 (7%) Query: 21 SGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVG 73 + + R + R GP G+LQ D IKLL ++ P +A ++F+L P + + Sbjct: 36 TWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILALA 95 Query: 74 VMLTIATALPVVTVGS---------PLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 + A+P S L+ + + I F G S + Sbjct: 96 PPFVVFVAIPFGETISVRGTEITLYLSNMNVALLFVFAVIGIEVFGVIFGGWAANSKYAV 155 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G+ R + E + + +A S ++ +I + + + Sbjct: 156 LGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQ--TDVWNIVYQPVGFFVFFV 213 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A E ++PFDLAEAE +L G +EYSG F + L+V + V +F Sbjct: 214 AGLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFAFFMVSEYVIVLLVSVLLVILFFGGWN 273 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 + L+ ++K+ V + F + R R D I W +A + + Sbjct: 274 ----GILVPMPPLLWFLLKVAFFVYLFIWFRFTFPRYRYDQLMAIGWKVLLPLSMANIII 329 >UniRef50_D2R5G3 NADH dehydrogenase (Quinone) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5G3_9PLAN Length = 409 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 118/344 (34%), Gaps = 39/344 (11%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------------GVLQEYRDIIK 48 +++ I L A + R A + +R GP G+ Q D +K Sbjct: 4 AMIKVGIMIGGLMTAAAYFVLLERRMAAWVQDRIGPNRVGIPLTKIRLFGLGQPLADGVK 63 Query: 49 LLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQL------------- 94 + ++ P ++ L P ++ L +P ++ P Sbjct: 64 FIFKEEYTPAHVDKRLYILAPISILAAALAAFAVIPFGSMLPPFAIGPVEVKDKIDLVVA 123 Query: 95 ----GDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQ 150 +I + L +IA + + G + + ++ +G R + + E + LG+ Sbjct: 124 PGADIGMIYVFALSSIAVYGVILGGWSSNNKYSFLGGLRSSAQLIAYELPMGLGILGVVL 183 Query: 151 VAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLS 210 AGS N+ + + + + L L A F E +LPFDL E EQEL G + Sbjct: 184 CAGSLNLEELITSQARTGVWYAFAQPLGLIVFVIAAFAEAARLPFDLPECEQELIGGYHT 243 Query: 211 EYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMET--------FTAGGLLLALVIAIV 262 EY+G + L + + V +F T + + + Sbjct: 244 EYAGLKLLLFLVAEFLHMITASFLIVMLFFGGWHFWGITGPADGDITWLHAIARIGVLNA 303 Query: 263 KLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 K+ + +L L S R R D + W + + +A Sbjct: 304 KIFLVILFFMLVRWSWPRFRFDQLMSLAWKVMLPLGIVNLVAVA 347 >UniRef50_B6YR61 NADH-quinone oxidoreductase subunit H n=5 Tax=Bacteroidales RepID=NUOH_AZOPC Length = 355 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 16/320 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 VL + + +A LL + R A R GP G+ Q D+IK+L ++ + Sbjct: 30 VLIAFVILIAYAVLALLLIYLERKVCAFFQCRLGPTRVGPWGIFQSVADMIKILLKELIR 89 Query: 57 PDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + +F L Y+++ + A+P + + LL + +I ++G Sbjct: 90 INKVDVCLFHLATYIVIIASICTFGAIPFDKGLHVVDFNIGVFYLLSVSSIGVVGILLAG 149 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS--QSI 173 + + +T IGA R + E L L ++GS +S+I + I Sbjct: 150 WASNNKYTIIGAIRSGAQLISYELSCGLSLMTVVMLSGSLQLSSIVEQQSCGWNIVRGGI 209 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++A A E + PFDL EAE EL G +EYSG FG L ++ Sbjct: 210 PAIIAFIIYLIAGHAETNRGPFDLPEAESELTAGYHTEYSGIQFGFFYLAEYLNMFIIAA 269 Query: 234 MFVGVFIPWG-------QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + +F+ + +++ VK + + + +M RLR+D Sbjct: 270 IATTLFLGGWMPLHIPGWNLFNEVMDFIPSILWFFVKTFICIFLALWVRWTMPRLRIDQL 329 Query: 287 PRITWAGFGFAFLAFVSLLA 306 + W L + L+A Sbjct: 330 LNLEWKILMPISLINIILMA 349 >UniRef50_C9RKY0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY0_FIBSS Length = 373 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 116/309 (37%), Gaps = 18/309 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +V+ + +V AP+L + R A + R GP G LQ D+IK+L ++ Sbjct: 44 AVICIIAVCVVNIGSAPILIYMERKVCAHVQCRLGPMRLGWHGTLQTIADVIKMLFKEVY 103 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P A +F L P +++ + +P + ++ + + Sbjct: 104 APSGADKLMFYLAPLIVLIAPFIVCALIPFDKNLVVADVSMGIPLIIAVNGFGVLGILLG 163 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH-----WPL 169 G + + ++ +GA R + E + L ++GSTN+ +IT W Sbjct: 164 GWSSNNKYSLLGALRSGAQMISYEISFAMILLFVVMISGSTNLMSITMGQEGTIFDWWIF 223 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 + +A ++ EM + PFD+AEAEQEL G +EY+G+ F + + + Sbjct: 224 KIPVLGFIAFILFFISSTAEMNRAPFDIAEAEQELTGGYHTEYNGTPFAMFYLAEYIALI 283 Query: 230 VVLQMFVGVFIPWGQMETFTA------GGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 + F+ ++ +V K+ V + + R R+ Sbjct: 284 TNSALATTCFLGGFFPPCIGIAAVDNVLNMVPGVVWFFAKIYFMVWCYMMVRWTFVRPRV 343 Query: 284 DITPRITWA 292 D W Sbjct: 344 DQLMDFEWK 352 >UniRef50_Q5LH51 NADH-quinone oxidoreductase subunit H n=28 Tax=Bacteroidetes RepID=NUOH_BACFN Length = 358 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 120/320 (37%), Gaps = 16/320 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV- 55 V+ + + +A LL + R R GP G +Q D++K+L ++ + Sbjct: 30 VVIGVCIVALYAILAILLIYMERKVCGFFQCRLGPNRVGKWGSIQVLCDVLKMLTKEIIE 89 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + +++ L P++++ + LP+ L + LL +I ++G Sbjct: 90 LKHSDKFLYNLAPFMVIIASFLTFSCLPISKGLEVLDFNVGVFFLLAASSIGVVGILLAG 149 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ--SI 173 + + F+ IGA R + E + L + + G+ S I ++ + I Sbjct: 150 WGSNNKFSLIGAMRSGAQIISYELSVGLSILTMVVLMGTMQFSEIVESQANGWFIFKGHI 209 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 P ++A A E + PFDL EAE EL G +EYSG FG L +V Sbjct: 210 PALIAFVIYLIAGNAECNRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNMFIVAA 269 Query: 234 MFVGVFIPWGQM-------ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + +F+ + + K V ++ + + RLR+D Sbjct: 270 VAATIFLGGWMPLHIVGLDGFNAVMDYIPGFIWFFGKAFFVVFLLMWIKWTFPRLRIDQI 329 Query: 287 PRITWAGFGFAFLAFVSLLA 306 + W + + ++ Sbjct: 330 LNLEWKYLVPISMVNLVIMV 349 >UniRef50_Q3B4V9 NADH-quinone oxidoreductase subunit H n=14 Tax=Bacteroidetes/Chlorobi group RepID=NUOH_PELLD Length = 372 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 110/328 (33%), Gaps = 22/328 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + V+ + + R A + +R GP G+LQ DI+KLL ++ Sbjct: 38 LLVIAAIPLVFIALYALTYGVYGERKISAFMQDRLGPMEVGKWGILQTLADILKLLQKED 97 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A ++F + P V+ LP L + + A+ Sbjct: 98 IVPTSADKFLFVIGPGVLFVGSFLAFAVLPFGPAFIGANLNVGLFYAIGIVALEVVGILA 157 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + + GA R V E + L A +AG+ ++ I Sbjct: 158 AGWGSNNKWALYGAVRSVAQIVSYEIPAAIALLCGAMMAGTLDMQEINVLQSGPWGFAHF 217 Query: 174 PLV------LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 L L A+ E + PFD+ EAE EL G +EYSG F V+ Sbjct: 218 FLFQSPIAWLPFLIYFIASLAETNRAPFDIPEAESELVAGYFTEYSGMKFAVIFLAEYGS 277 Query: 228 QLVVLQMFVGVFIPWGQMETFTAG---------GLLLALVIAIVKLVVGVLVIALFENSM 278 +V + VF+ G G + I+K + V ++ Sbjct: 278 MFMVSAIIAIVFLGGWNSPLPNIGSLALNDLTTGPVWGAFWIIMKGFFFIFVQMWLRWTL 337 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSLLA 306 RLR+D + W L A Sbjct: 338 PRLRVDQLMYLCWKVLTPFAFVSFVLTA 365 >UniRef50_Q67P15 NADH-quinone oxidoreductase subunit H 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOH1_SYMTH Length = 328 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 113/303 (37%), Gaps = 15/303 (4%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVF 64 + + R A R GP GVLQ D+IK+L ++ + P+ A ++ Sbjct: 20 CVTLAVAVFLLFMRKFLAYFAYRVGPVKVGPWGVLQPIADVIKMLFKEDIMPEQADPLIY 79 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPL----PQLGDLITLLYLFAIARFFFAISGLDTGS 120 RL P + L + +P GS ++ +L + A+ + A+ G + + Sbjct: 80 RLAPVIAFFCALGVWVVIPWAPRGSWWSSMADPNAGVLVILAIAAMGVYGTALGGWASQN 139 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 + +G+ R + E + + L + GS ++ +I D + P L Sbjct: 140 KYGLLGSMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRNM--INLFPQFLGFL 197 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A+ E G PFDL E+E EL G ++Y G FG+ + + F+ Sbjct: 198 VFYIASLAEAGWTPFDLPESETELVAGYHTDYGGMRFGLFFLTELTHAVNSAVLSTTFFL 257 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 ++ V ++K+++ V V+ + + R R D W Sbjct: 258 GGYNPWF--GLTMIPGFVWFLLKVILMVFVLYWIKCTFPRFRYDRLMVFGWKVLLPVAAL 315 Query: 301 FVS 303 + Sbjct: 316 NLV 318 >UniRef50_Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic n=236 Tax=cellular organisms RepID=NU1C_ARATH Length = 360 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 123/325 (37%), Gaps = 20/325 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L + ++ + R A + R GP G+LQ D KLL ++++ Sbjct: 30 FVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLR 89 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P + +F + P + V +L + +P + + + +IA +SG Sbjct: 90 PSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSG 149 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP- 174 + + ++ +G R A + E L L + + ++ S + +I + + Sbjct: 150 YGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLW 209 Query: 175 -LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + ++ E +LPFDL EAE+EL G +EYSG FG+ L L+ Sbjct: 210 RQPIGFIIFLISSLAESERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSL 269 Query: 234 MFVGVFIPWGQMETFTAGGLLL-----------ALVIAIVKLVVGVLVIALFENSMARLR 282 +++ + + L L + I + K + + V ++ RLR Sbjct: 270 FVTVLYLGGWNISSPYISILELFQRDQIFATTIGIFITLAKTYLFLFVSIATRWTLPRLR 329 Query: 283 LDITPRITWAGFGFAFLAFVSLLAA 307 +D + W L + L + Sbjct: 330 MDQLLNLGWKFLLPISLGNLLLTTS 354 >UniRef50_Q37381 NADH-ubiquinone oxidoreductase chain 1 n=164 Tax=Eukaryota RepID=NU1M_ACACA Length = 369 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 122/338 (36%), Gaps = 35/338 (10%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L L L + L+ R A + R+GP G+LQ D +KL+ +++ Sbjct: 9 ILLSLYLILNVILTVAFLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPV 68 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +AS +F P +++ + L+ +P ++ + + ++ ++G Sbjct: 69 PQNASSVLFFGGPLILLILSLSAWFVIPFNNETVVSDINIGILYVFMVSSLNTLNIIVAG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E ++ + + ++GS N I L + L Sbjct: 129 WSSNSRYAFLGALRSIAQVIAYEVVIGIIIINIIVLSGSLNFLKIVWAQKD--LWYAFVL 186 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 A E + PFDLAEAE EL G E+S F + +++ + Sbjct: 187 WAQFFLFFIAMLAETNRHPFDLAEAESELVSGYNVEHSSVLFALFFLSEYANIILLCHVA 246 Query: 236 VGVFIPWGQME--------------------------TFTAGGLLLALVIAIVKLVVGVL 269 +F+ M F + ++ I+K+ + + Sbjct: 247 TILFLGGWTMPDLYFFIKFFSVEYYVSIDEFFYTLRSNFYYITWIYHSLVYIIKVYIYLF 306 Query: 270 VIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 ++ R R D R+ W F + V + + Sbjct: 307 AFIWVRATLPRYRYDQLMRLGWKVFVPLTIGLVFISIS 344 >UniRef50_O67336 NADH-quinone oxidoreductase subunit H n=12 Tax=Aquificales RepID=NUOH_AQUAE Length = 336 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 111/322 (34%), Gaps = 19/322 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + L +I + + L+ R + NR GP G+LQ D +KL ++ + Sbjct: 11 TFLKIVIVFSLALGIGAYLTWFERKLAGHIQNRLGPTVVGKFGILQPLADALKLATKEVI 70 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVG---------SPLPQLGDLITLLYLFA 105 P A V+ + + + + T +P L+ + Sbjct: 71 IPRGADKPVYYAAVVMALVPSILLLTIIPFGPGFRVGNTYIEPIIADVNIALLLAFAFGS 130 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 ++ + SG + S + IG+ R+A + + E +L + +AG+ + I + Sbjct: 131 LSVYGTIFSGWASNSKYAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIVEAQI 190 Query: 166 HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI- 224 + +A F E G++PFD+ EAE EL G EY G FG Sbjct: 191 QKGVWFIFYQPVAFILYLFCMLAESGRVPFDIQEAEAELVTGYNVEYGGMKFGAFPLAEW 250 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 + + + + V +F G L + K V ++ R + Sbjct: 251 YVNVIALSAIAVVLFFGGWDGP--HIFGPLSPYFWFVFKTFALVFFTLWLHWTLPRFQAK 308 Query: 285 ITPRITWAGFGFAFLAFVSLLA 306 I W + V + A Sbjct: 309 DITEIAWKILLPIAILNVIITA 330 >UniRef50_Q3JMD4 Formate hydrogenlyase subunit 4 n=40 Tax=Proteobacteria RepID=Q3JMD4_BURP1 Length = 975 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 3/289 (1%) Query: 21 SGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIAT 80 +G RA L NRR P + Q YR + KL ++SV + + +FR PYV+ M Sbjct: 684 TGWVNQCRAWLQNRRAPSIWQPYRMLHKLFNKESVVAEHASPLFRGAPYVVWAAMALACA 743 Query: 81 ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPM 140 +P ++ P D I L+ LFA+AR +++ +D G+ F +GA RE ++G L EP Sbjct: 744 IVPTLSTELPFSPAADAIALVGLFALARVALSLAAMDIGTAFGTLGARREMLIGFLAEPA 803 Query: 141 LLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 LL+ L+ A+ + ST +++I + H L+ L A A + E +LP D Sbjct: 804 LLMVLFSASLITRSTLLTSIVAALGHRELAIYPSLAFAGIAFTLVSLAENARLPVDNPAT 863 Query: 201 EQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLAL 257 E + E + EYSG +M+W SLK + + +F+PWG E + LLLAL Sbjct: 864 HLELTMIHEALILEYSGRHLALMEWAASLKLFAYSCIGLALFMPWGIAEAGSPLALLLAL 923 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 VKL+VG +A+ E + A++RL P + F A + + Sbjct: 924 PALFVKLLVGGAALAVVETTNAKMRLFRVPEFLASAFLLAVIGMLVHFL 972 >UniRef50_Q20Z45 NADH-quinone oxidoreductase subunit H 2 n=16 Tax=Bacteria RepID=NUOH2_RHOPB Length = 324 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 10/300 (3%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ + + +VL VA + + R + R GP G LQ D +K+L ++ Sbjct: 6 LTAIISTMLIMVLLVVAGTFTWVERRVLGFVQERLGPNRVGPFGFLQWVADTVKILTKED 65 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P A + L P V +L + + ++ LL + + + + Sbjct: 66 RPPPGADRVAYILAPMVAATPVLAGFGVVAFGDGLALANIDVGVMFLLGMMGLTVYGVVL 125 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 L + S F +G R A + E L L L +AGS +++ I + + Sbjct: 126 GALASHSRFALMGGLRAAAQMLGYEAFLGLSLLGVVMIAGSLSLTEIVHAQRD--VWFVL 183 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 A +LPFDL E+E +L G L+EY+G FG+ G L L+V Sbjct: 184 LQPFGAALFCIAGVAAAHRLPFDLPESENDLVAGYLTEYTGMSFGLFFLGEYLAVLLVAS 243 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + V +F G L + +K+ V L+ ++ R R D R W Sbjct: 244 LAVTLFFGGWLGP-VWLGPYLPGPIWFGLKVGVIALIFIWIRATLPRPRYDQLVRFAWKI 302 >UniRef50_Q9TAH6 NADH-ubiquinone oxidoreductase chain 1 n=45 Tax=Eukaryota RepID=Q9TAH6_CAFRO Length = 336 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 21/324 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +LY L + + + R + R+GP G+LQ D +KLL ++SV Sbjct: 9 ILYFLALIIFVLLSVAFYVLLERQILGHVTRRQGPSTVGIFGLLQTIADALKLLAKESVF 68 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P + + VF P G+ L +P + ++ LL L +++ ++G Sbjct: 69 PRSINTIVFIFAPIFTCGLALANWVVIPFGNGWAVADFNLGVLYLLALSSLSVHSIIMAG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R A + E + L L ++ S N+++I + + IPL Sbjct: 129 WSSNSKYAFLGALRSAAQMISYEIAMGLILLSVILLSQSLNLTDIVMAQ--YNVWFFIPL 186 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E + PFDL EAE EL G EYS GF + +++ Sbjct: 187 FPLFLMFLICILAETNRHPFDLPEAEAELVSGYNVEYSAVGFVLFFLAEYNNIIMMSAFT 246 Query: 236 VGVFIPWGQMETFTAGG------------LLLALVIAIVKLVVGVLVIALFENSMARLRL 283 +F+ + ++ L + +K ++ ++ + ++ R R Sbjct: 247 NILFLGGWNVPFYSFWFFGDGILRNIFESYLWPSLFFSLKTILVMIFFVIIRTALPRYRY 306 Query: 284 DITPRITWAGFGFAFLAFVSLLAA 307 D R+ W F LAF+ + + Sbjct: 307 DQLMRLGWKIFLPLALAFLIIYLS 330 >UniRef50_Q72GD5 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_THET2 Length = 365 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 121/320 (37%), Gaps = 20/320 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M L L+ + L ++ I R AR R GP G+LQ D IK + ++ Sbjct: 12 MVALKALLVVVGLLTAFAFMTLIERRLLARFQVRMGPNRVGPFGLLQPLADAIKSIFKED 71 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL-------PQLGDLITLLYLFAI 106 + A ++F L P + V L +P GS ++ L + + Sbjct: 72 IVVAQADRFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVINLDLGILYLFAVSEL 131 Query: 107 ARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYH 166 A + +SG +GS ++ +G+ R + + E L L L + GS N+++I + Sbjct: 132 AVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKE 191 Query: 167 WPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 + A A+ E + PFDL EAEQEL G +EYS + + + + Sbjct: 192 HG-WLFLYAFPAFLVYLIASMAEAARTPFDLPEAEQELVGGYHTEYSSIKWALFQMAEYI 250 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + + +F+ M + + +KL + + RLR D Sbjct: 251 HFITASALIPTLFLGGWTMPVLE-----VPYLWMFLKLAFFLFFFIWIRATWFRLRYDQL 305 Query: 287 PRITWAGFGFAFLAFVSLLA 306 R W L + + A Sbjct: 306 LRFGWGFLFPLALLWFLVTA 325 >UniRef50_B3DXP1 NADH-ubiquinone oxidoreductase chain H n=3 Tax=Verrucomicrobia RepID=B3DXP1_METI4 Length = 375 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 126/355 (35%), Gaps = 50/355 (14%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------------GVLQEYRDIIK 48 +++ ++ +L V R A + +R GP G+ Q D K Sbjct: 12 TLVKIILVVGILLGVVAYTVLAERKICAAIQDRVGPNRVGLPFLKSRLWGLGQPIADAFK 71 Query: 49 LLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALPVVTV---------------GSPLP 92 L+ ++ P + + L P+ ++ L I +P ++ G + Sbjct: 72 LMLKEQFVPRVVKKFYYSLAPFFVIVPPLIIIGFIPFASIDPVTLSSLKIIIPQPGVIIN 131 Query: 93 QLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA 152 ++ + +++ + ++G + S + +G R + E L + + Sbjct: 132 SGTGVLWAFAISSLSVYGIVLAGWSSNSKYAFLGGIRSTAQMISYEVALGFSIIPVFLLT 191 Query: 153 GSTNISNITDTVYHWPL---------------SQSIPLVLALCACAFATFIEMGKLPFDL 197 GS N S I L L+ A F E + PFDL Sbjct: 192 GSLNFSEIVQYQIEHGWLLFPFLGKHPDFRLFVFWPFLFLSFLIFMVALFAETNRAPFDL 251 Query: 198 AEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF------TAG 251 E+EQEL G +EY G FG+ G + + + +F+ + + G Sbjct: 252 PESEQELVAGYNTEYGGMKFGMFFLGEYAAMIAASSLIITLFLGGWSLPFGWLSEGKSLG 311 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 +LL ++ ++K+++ + + ++ R R D + W F + + +A Sbjct: 312 VILLQALVFLLKILIFLFLFIWVRWTLPRFRYDQLMNLGWKIFLPLAMVNIGCVA 366 >UniRef50_Q6ANM8 NADH-quinone oxidoreductase subunit H n=7 Tax=Bacteria RepID=NUOH_DESPS Length = 333 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 111/313 (35%), Gaps = 21/313 (6%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVF 64 + A L R A + R GP G+LQ D IKL+ +Q V P +F Sbjct: 18 FVAVNAAYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILF 77 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 + P + + L +P L+ +L + A ++G + + ++ Sbjct: 78 MVAPVLAMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSM 137 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL----------SQSIP 174 + A R + E +L+ V+GS + I + +I Sbjct: 138 MAAIRAVSQTIAYEIPMLITAITVVLVSGSVDFIEIVHSQSGGFWHWNLWPLKPGLFNIF 197 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 + ++ + E + PFDL EAE EL G +EYS GFG+ G ++ + Sbjct: 198 MPISFLIFFICSLAETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMGEYANIVIGACL 257 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ GL + ++K+ + + + R + ++W Sbjct: 258 TTLLFLGGWDCP----FGLFPGVWWFLIKIYILIFTFIWIRWTFPRTTIYGLLNLSWKIL 313 Query: 295 GFAFLAFVSLLAA 307 L + L A Sbjct: 314 IPLSLINLLLTAG 326 >UniRef50_A4GJ19 Putative respiratory-chain NADH dehydrogenase subunit H n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ19_9DELT Length = 358 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 131/338 (38%), Gaps = 38/338 (11%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLLGRQ 53 I A+ + AP+L+ + R A + +R G G+ D +K+ ++ Sbjct: 12 ILFIFAVTVGFFAPVLTWVERKQSALMQDRIGANRADIMGFTFLGLFHIIADALKMFTKE 71 Query: 54 SVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLP---------QLGDLITLLYL 103 PD A+ ++ ++P V + L +P + L+ + + Sbjct: 72 DFIPDGANKFLHTMSPIVALVPALLTFAVVPFGGQYTLFDKEVNLVISDLDVGLLFVFAI 131 Query: 104 FAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDT 163 ++A + + I+G + + ++ +G+ R A + E + L + V GS ++ I Sbjct: 132 ASLATYGYVIAGWSSNNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSMKLTEIGTI 191 Query: 164 VYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG 223 ++ + L A+ E ++PFD EAE EL G +EYSG FG+ Sbjct: 192 QENFWMWGIFLQPLGFFMFLTASIAENKRIPFDAPEAESELVAGYFTEYSGLKFGMFFMA 251 Query: 224 ISLKQLVVLQMFVGVFIPWGQMETFTAGGL-----------------LLALVIAIVKLVV 266 ++ + + + +F+ + ++ L L+ + + K+V Sbjct: 252 EFIEMVTIGAIMTILFLGAWHIPFLSSATLLSWFDFLGTTGSNLVLMLIHVGVFFAKVVF 311 Query: 267 GVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 + + + ++ R R D ++ W LA + + Sbjct: 312 FIYLQMVIRWTLPRFRYDQIMKLGWKILLPLSLANILI 349 >UniRef50_Q08SR0 NADH-quinone oxidoreductase chain h n=3 Tax=Cystobacterineae RepID=Q08SR0_STIAU Length = 444 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 119/356 (33%), Gaps = 63/356 (17%) Query: 14 FAVAPLLSGITRVARARLHNRRGP----------------GVLQEYRDIIKLLGRQSVGP 57 +A LL+ R A + +R GP G+ D +K+L ++ P Sbjct: 1 MIIATLLTVAERKWSALIQDRIGPNRARINLPGLRNAPLAGIPHLIADAVKMLTKEDFVP 60 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLP---------QLGDLITLLYLFAIA 107 A+ ++F+L P + G + + +P + L+ LL + ++A Sbjct: 61 ALANAFIFKLGPILAFGSVFALFAVVPAGPSITLWGQRVDMVVSTPDFGLLYLLAIASLA 120 Query: 108 RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-- 165 + +++G + + F +G R + + E L L L + ++ I T+ Sbjct: 121 VYGTSLAGWASNNKFALLGGVRASSQMISYEVALGLSLVGLIMAFSTVQMTPIVGTLAAE 180 Query: 166 -----------------------HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 P I L A+F E + PFD E + Sbjct: 181 TGASTGQARYLWQLTGADGGFDIGLPSWGFILQPLGFLGFFAASFAETKRAPFDAPEGDS 240 Query: 203 ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT-----------AG 251 E+ G EYSG FG+ ++ +V+ + +F + Sbjct: 241 EII-GYFVEYSGMKFGLFMISEFVEVVVLAGVTTVLFFGGWHLPFGGEWVATQLKDAPLL 299 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 L + +K++ + + + + R R D + W L V + A Sbjct: 300 YGTLLGTVFWMKVLGLIFIQMVIRWTFPRFRYDQIQTLGWKILLPMGLVNVFVTGA 355 >UniRef50_Q2F2C2 NADH-ubiquinone oxidoreductase chain 1 n=191 Tax=Coelomata RepID=Q2F2C2_DAPPU Length = 311 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 111/297 (37%), Gaps = 23/297 (7%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPYV 70 + R + R+GP G+LQ + D IKL ++ V P S + F + P Sbjct: 19 AFFTLFERKLLGYIQLRKGPNKVGLGGILQPFSDAIKLFSKEHVSPSTSNYSAFLIAPCF 78 Query: 71 MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 +G+ L + ++P + + L ++ L + + +G + S ++ IG R Sbjct: 79 SLGLSLLMWLSIP--SFFNLLSFNKSVLFFLCGLGVGVYGLLAAGWSSNSKYSLIGCLRG 136 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM 190 V E L+L L+ V + + + + L +A + E Sbjct: 137 VAQTVSYEVSLVLILFTPLVVTVGYELGSFSSFQEN--LWFIFIFPVAGLIWFISCLAET 194 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFD AE E EL G +EYS GF ++ L + +F +F+ Sbjct: 195 NRTPFDFAEGESELVSGYNTEYSSGGFALIMLAEYTSILFMSFLFSVIFLGGD------- 247 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 +V V + ++ R R D + W F ++++ L+A Sbjct: 248 -----CSFFVLVSFGVMAFIFVWVRGTLPRFRYDKLMYLAWKFFLPFSISYLVLMAG 299 >UniRef50_C7Q2D9 NADH dehydrogenase (Quinone) n=29 Tax=Actinomycetales RepID=C7Q2D9_CATAD Length = 322 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 122/312 (39%), Gaps = 14/312 (4%) Query: 4 LYPLIQALVLFAVAPLLSG-ITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSV 55 + L L F V PL+ G + A A + +R GP G Q D +K ++ V Sbjct: 7 VVRLAIILGFFLVVPLVVGQMEHKAMAHMQSRVGPMYAGAFHGWAQLVADGVKFAQKEDV 66 Query: 56 GPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVG-SPLPQLGDLITLLYLFAIARFFFAI 113 P A VF+L P V + L + A+P+ L +L + + + Sbjct: 67 VPAAADRRVFQLAPAVALIPYLVVLVAIPIGPGTQVGRDLDAGLFFVLAVMGVGVLGSLM 126 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ +G R A + E ++L A AG+ +++ I W Sbjct: 127 AGWASANKYSLLGGIRSAAQLMAYELPMILAASSVAMAAGTLSLTGIAVA---WHWYWLP 183 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 ++ L + E+ + PFD+ A+ E+ G +EY+G F + +V+ Sbjct: 184 WQLMGLFVFFVSGLAELQRPPFDMPVADSEIIFGAYTEYTGIRFALFLLAEYAGIVVLSL 243 Query: 234 MFVGVFIPWGQMETFTAGGLL-LALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +++ + + G + K +V ++ S RLR D ++ W Sbjct: 244 LTTVLYLGGWKGPFYLGLGAAGFGWFWTLAKTLVLAFLVIWLRVSYPRLREDQLQKLAWT 303 Query: 293 GFGFAFLAFVSL 304 LA ++L Sbjct: 304 TLIPLALAQIAL 315 >UniRef50_C3RYN6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Embryophyta RepID=C3RYN6_9EMBR Length = 328 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 104/313 (33%), Gaps = 10/313 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L + LL A + R+G G LQ D +KL+ ++ + Sbjct: 9 LAKILGIVIPPLLGVALLVSAECKVTASMQRRKGLNVVGLFGSLQPLADGLKLMIKELIL 68 Query: 57 PDASG-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P ++ ++ + P + +P ++ L + ++ + G Sbjct: 69 PSSANLFISIMAPVITFMSSSVAWAVIPFDYGMVLSDSNVGILHLFAISSLGVYGIITVG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + + GASR A VL E + + + G N+S I + IPL Sbjct: 129 RVSNPKYASSGASRSAAQTVLYEVSIGPIIITVSIRVGPRNLSEIVMAQKQ--IWFGIPL 186 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L + E + D EAE E G EY GF G +++ + Sbjct: 187 FPVLIMFFISRLAETNRAFSDPPEAEAESVAGYNVEYPLMGFAPPSLGEYANMILMSSLC 246 Query: 236 VGVFIPWGQM-ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + F + + +K++ + + R R D + R+ W F Sbjct: 247 TLPSLGGWPPIPDFPIFEAISGSIWFSIKVLFFPPIHIRVRAAFPRYRYDQSMRLGWKVF 306 Query: 295 GFAFLAFVSLLAA 307 LA V ++ Sbjct: 307 LPLSLARVVFVSG 319 >UniRef50_Q02CT6 NADH-quinone oxidoreductase subunit H 1 n=2 Tax=Bacteria RepID=NUOH1_SOLUE Length = 397 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 122/378 (32%), Gaps = 74/378 (19%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S++ + VL L + R A + R GP G+LQ D+IKL+ ++ Sbjct: 10 ISLVKAAVIFGVLMTTLAYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKED 69 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVT---------VGSPLPQLGDLITLLYLF 104 + P + ++ P++ + + L + +P ++ +L + Sbjct: 70 LVPPYVNKPLYLAAPFLAITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVS 129 Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 ++ + A++G + + ++ IG R + + E + L + ++ + ++ + + Sbjct: 130 SMGVYGIALAGWASNNKYSLIGGLRSSAQMISYELPMSLAIAAPLLISNTLSLRELVERQ 189 Query: 165 YHWPLSQ-----SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGV 219 L+ P V++ A F E ++PFDL EAE EL G +EYS F Sbjct: 190 AGSILNWNLLSGPFPQVISFIIFIIAAFAETNRVPFDLPEAENELVAGFHTEYSSMKFAS 249 Query: 220 MKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG--------------------------- 252 + V M +F+ A G Sbjct: 250 FFMAEYANMITVSAMATLLFLGGWMAPWPAAYGSSLVPSILFGISGLVLLYHGVNAVRKR 309 Query: 253 --------------------------LLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 LL L K + ++ R R D Sbjct: 310 DKLTFPAFGIIFLGIAGIFLLPMVQSWLLPLFWFCAKTGAILFAFMWIRGTLPRFRYDQL 369 Query: 287 PRITWAGFGFAFLAFVSL 304 TW + + + Sbjct: 370 MGFTWKFLFPVAMLNLLV 387 >UniRef50_Q6MGN3 NADH-quinone oxidoreductase subunit H n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOH_BDEBA Length = 385 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 126/363 (34%), Gaps = 60/363 (16%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 L ++ L++ P+L + R A + +R GP G++Q D +K L +++ P Sbjct: 15 LKLVVIFLMMVQAVPILVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMP 74 Query: 58 DASG-WVFRLTPYVMVGVMLTIATALP-------------------VVTVGSPLPQLGDL 97 + +++ P + +A+P + + Sbjct: 75 QTAKPFLYYAAPIFALIPGAVAFSAIPLSSPIQVGTFEMFGSTWGPYTFLVQGYDIGVGI 134 Query: 98 ITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNI 157 + +L + ++A + ++G +G+ +T +GA R + + E L L + + G+ N+ Sbjct: 135 VFILGVSSLAAYTLLMAGWGSGNKYTLMGALRASAQTISYELALGLSIVGVIMLYGTFNL 194 Query: 158 SNITDTVYHW---------------PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQ 202 + +T P + A F E +LPFDLAE E Sbjct: 195 TEMTLAQQGPLAFSFLGHTITANWLPNWGIFYQPVGALLFFSAAFAESNRLPFDLAEGES 254 Query: 203 ELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF-------------- 248 EL G +EY G F + G ++ + V F + Sbjct: 255 ELVGGFHTEYGGFKFNMFFIGEYGHMMIASGLMVLFFFGGYTIPYVSVAELNEWAAGVAS 314 Query: 249 -----TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 +A L+ ++ +K + V ++ R R D + W LA Sbjct: 315 TAGKASALVALIHFLVFNIKFGFFMWVFIWVRWTLPRFRYDQLMDLGWKTMLPWALANTI 374 Query: 304 LLA 306 + A Sbjct: 375 ITA 377 >UniRef50_Q11RU2 NADH-quinone oxidoreductase subunit H 2 n=5 Tax=Bacteroidetes RepID=NUOH2_CYTH3 Length = 365 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 122/355 (34%), Gaps = 53/355 (14%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L ++ A + R A + +R GP G+LQ D+IKLL ++ + Sbjct: 1 MFVVLFVLTLILLYAVFVVWAERKVAAFIQDRLGPMEVGPYGMLQTIADLIKLLQKEDII 60 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 A+ ++FRL P ++ + LP + ++ + ++ ++G Sbjct: 61 ATGANRFLFRLAPVLIFTAIFAGFATLPFAPDLIGSKADVGVFFMITIVSLDVVGIFLAG 120 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY---------- 165 + + F+ +GA R + E L L + + + ++ I+ Sbjct: 121 WASNNKFSILGAFRAIAQVISYEIPLTLSILAVVLICQTLDLQEISFQQGIYFVNKQELN 180 Query: 166 --------------------HWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQ 205 W + L+LA A+ E + PFD+ E E EL Sbjct: 181 TSLFGITSLGIDVNKIGGFVSWNAFKYPFLLLAYVVFFIASLAECNRAPFDIPEGESELV 240 Query: 206 EGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP----------------WGQMETFT 249 G +EY+G F ++ L+V + V +F W T Sbjct: 241 SGFHTEYTGFRFAILFLAEYAMMLLVAFLGVVLFFGSWNTALPNIGSLHFADWTSGTPGT 300 Query: 250 AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 G L I K + V + + + RLR+D + W L V + Sbjct: 301 IAGYAWGLFWLISKGITVVFLQLVMRWTYPRLRVDQLMNLCWKILLPLSLFLVIV 355 >UniRef50_Q2IL15 NADH-quinone oxidoreductase subunit H n=4 Tax=Anaeromyxobacter RepID=NUOH_ANADE Length = 413 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 119/329 (36%), Gaps = 29/329 (8%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRG------PGVLQEYRDIIKLLGRQSVGP 57 + LI ++ + AR+ +R G G Q D +KLL ++ + P Sbjct: 31 VLALILVSFGAVISGMTVWWEMRVSARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIP 90 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 DA +FR PY ++ + ALP + + + A+ ++G Sbjct: 91 ADADRLLFRAAPYFVLVGFALVFVALPFGESLIAADLNVGIFYITAVTALVVVGILVAGW 150 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL----SQS 172 + S + G R A + E L + V ++G+ ++ I + WP + Sbjct: 151 SSNSKWALFGGMRSAAQVISYEIPAGLAVMVPVLMSGTLSMQGIIRSQGAWPWEWHALTN 210 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 ++A A E + PFDL EAE EL G LSEYS F + V+ Sbjct: 211 PFAMVAFAIFFVAQLAEGNRTPFDLPEAESELVAGYLSEYSAFRFALFFLVEFGNLWVMS 270 Query: 233 QMFVGVFIPWGQMETFTA------------------GGLLLALVIAIVKLVVGVLVIALF 274 + V +F Q+ G L ++++ + K +V + V+ Sbjct: 271 AISVTLFFGGWQVPFAGPEVFAAARGAGDLPGLAWWGLQLASMLVFVAKTLVLLNVVVWV 330 Query: 275 ENSMARLRLDITPRITWAGFGFAFLAFVS 303 ++ R+R+D + W Sbjct: 331 RWTLPRIRVDQMMSLCWKYLVPFAFVCFV 359 >UniRef50_A9UKA6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Gymnolaemata RepID=A9UKA6_BUGNE Length = 311 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 111/312 (35%), Gaps = 18/312 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ L L L + + R + R+GP G+ Q D +KL +++ Sbjct: 6 TLIKSLTLFLCLALSVGFYTLVERKVLSYAQLRKGPNKAGFLGIPQPLADAMKLFTKETT 65 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 S + ++ ++P + +M + + ++ + + ++ + +S Sbjct: 66 KIQKSMFILYNISPVLATSIMFITWMLYNTPANQNTI-IKLSIMLFIVISSLNVYTIMLS 124 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + +GA R + E + L + ++ + N+ + + L Sbjct: 125 GWASNSKYALLGAIRAVAQTISYEISMALLIMSILLISLNFNMEKTSISQM-PTLWMMFI 183 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L L A E + PFDLAE E EL G EY F ++ L V + Sbjct: 184 LPLIFSAWMITMLAETNRSPFDLAEGESELVSGFNIEYGSGEFALLFIAEYGSILFVTVL 243 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + + + +VK++ + R+R D +TW F Sbjct: 244 TATLMLKGSFNTIN---------LTQMVKIMTLAFTFLWVRATFPRMRYDALMSLTWKTF 294 Query: 295 GFAFLAFVSLLA 306 + V++L Sbjct: 295 LTLTICSVTMLI 306 >UniRef50_P92111 NADH-ubiquinone oxidoreductase chain 1 n=46 Tax=Arthropoda RepID=P92111_9HEMI Length = 310 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 110/313 (35%), Gaps = 22/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + L + + + R + + R+GP G+LQ + D +KL ++ Sbjct: 1 MYYISFFSLLLFVLVSVGFFTLLERKVLSYIQCRKGPNKLGVLGLLQPFSDGMKLFMKEQ 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P +++ ++ + P + L I P + L + L ++ + I Sbjct: 61 FFPMNSNSMIYMVCPVFSMIQSLFIWVIFPYY--VNCLEMGLGFLFFLCCSSLGIYGLMI 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S ++ +G R + E L L L + S + I+ + + L + Sbjct: 119 CGWSSNSVYSMLGCIRSISQAISYEVSLSLILLCFFLLVDSYSF--ISYYNFQFSLWLIM 176 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E + PFD +E E EL G EY G GF ++ + + Sbjct: 177 LSLPIFFRWLSCCMAESNRTPFDFSEGESELVSGFNVEYGGGGFALLFISEYSSIIFISM 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ +I +KLV+ + ++ R R D + W Sbjct: 237 ITCVIFLGSDFCS-----------LIFYIKLVLMCFLFIWVRATLPRYRYDKLMYLAWKC 285 Query: 294 FGFAFLAFVSLLA 306 + L ++ Sbjct: 286 YLPLSLNYILFFI 298 >UniRef50_A9NI38 NADH-ubiquinone oxidoreductase chain 1 n=167 Tax=Protostomia RepID=A9NI38_9CAEN Length = 327 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 107/310 (34%), Gaps = 17/310 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +SV+ L + + + + R + + R+GP G+ Q D KLL ++ Sbjct: 3 LSVVSCLCSYICVLLAVAFFTLLERKGLSYMQLRKGPNKVGIMGLPQPIADAAKLLTKEI 62 Query: 55 VGPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P + + + + P + L + P + ++ L + + + + Sbjct: 63 AKPTMANYSPYFVAPIFSFVLALLLWQLYPSLYSLGYF--KWGILFFLCVSGMNVYGTLL 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +G+ R + E + L L + G+ + + ++ + S Sbjct: 121 AGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGTFSFIEVKESQE--IIWLSF 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 ++ E + PFD AE E EL G EY +GF ++ LV+ Sbjct: 179 LMIPVSLIWFVTCVAETNRAPFDFAEGESELVSGFNIEYGSAGFALIFLAEYANILVMSL 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F + + ++ ++K++ + S R + D+ Sbjct: 239 FSALLFFGGSSVFFMNSN------IMFMLKVLFFAFLFIWVRGSYPRFQYDLFNSTNLKS 292 Query: 294 FGFAFLAFVS 303 + Sbjct: 293 IFASISILFI 302 >UniRef50_A9GUZ6 NADH dehydrogenase (Ubiquinone) n=2 Tax=cellular organisms RepID=A9GUZ6_SORC5 Length = 588 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 98/323 (30%), Gaps = 57/323 (17%) Query: 38 GVLQEYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVT---------- 86 G L D IK++ ++ P +A + L P + + L +P Sbjct: 191 GTLHAAADAIKMIWKEDFIPKNADRLLHSLAPLLAMFPALVTFAVIPFGDKLCFEDNGDG 250 Query: 87 -------------------------VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ + + A++G + + Sbjct: 251 VFGFGDLPLLKRTVDQAFTCSGHVVNLQVADLNVGILYIFAMAGTGIIGAALAGWASDNK 310 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F+ +G R A V E + L + + GS + ++ LA Sbjct: 311 FSLLGGLRAASQMVSYEVAMGLSIVGLFIIYGSVRLGDMVQWQAEH-TWGIFVQPLAFIL 369 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A E ++PFD E E E+ G EYSG FG+ G ++ + + V +F Sbjct: 370 FLAALAAETKRIPFDQPEGESEIVAGYFVEYSGMKFGMFMTGEYVELITSSALLVTLFFG 429 Query: 242 WGQMETFTAGGL--------------------LLALVIAIVKLVVGVLVIALFENSMARL 281 + G+ L ++ K ++ V F ++ R Sbjct: 430 GYHLPFLDRDGINIAFGDATLFQYKMTHFAVSLTYVLAFFGKTILMAWVQVFFRWTLPRF 489 Query: 282 RLDITPRITWAGFGFAFLAFVSL 304 R D R+ W + + + Sbjct: 490 RYDQVMRLGWTKLLPLTIVNMMV 512 >UniRef50_B8Y2U8 NAD(P)H-quinone oxidoreductase subunit 1 (Fragment) n=3 Tax=Poaceae RepID=B8Y2U8_FESAR Length = 363 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 113/312 (36%), Gaps = 26/312 (8%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFRLTPY 69 ++ + R A + R GP G+LQ D KLL ++ + P +F + P Sbjct: 43 VFVIVWLEREIFAWIQPRIGPEYAGPLGLLQAIADGTKLLFKEDILPSRGDIPLFSIGPS 102 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 + V +L +P+ + + + +IA ++G + + ++ G R Sbjct: 103 IAVISILLSFLVIPLAYHFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLR 162 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIPLVLALCACA-FAT 186 A + E L + + ++ S++ +I + + + + T Sbjct: 163 AAAQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNIWRQPIGFSGFSNLIT 222 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG--- 243 E +LPFDL EAE+EL G +EYSG + + L LV +++ Sbjct: 223 LAECERLPFDLPEAEEELVAGYQTEYSGIKYALFYLVSYLNLLVSSLFVTVLYLGGWDLS 282 Query: 244 -----------QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + + + I + K + + + ++ R+R+D + W Sbjct: 283 IPYISFFDFFKMNNAVGILEITMGIFITLTKAYLFLFISITIRWTLPRMRMDQL--LIWM 340 Query: 293 GFGFAFLAFVSL 304 F +S Sbjct: 341 EFLLTISWGISY 352 >UniRef50_Q1IS58 NADH-quinone oxidoreductase subunit H 1 n=261 Tax=cellular organisms RepID=NUOH1_ACIBL Length = 426 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 17/286 (5%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 +Y L+ V L++ + R A + R GP G+LQ D +KLL ++ + P Sbjct: 26 VYILVIFGVASVAVMLMTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLIKEDIVP 85 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 D A ++F + P ++ T +P + ++ ++ + ++ ++G Sbjct: 86 DGADKFLFWMAPVTVMMTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLGVLAVVMAGW 145 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA------GSTNISNITDTVYHWPLS 170 + S + +G R A V E + L + + G+ ++ I Sbjct: 146 SSNSKYALMGGLRSAAQMVSYEVAMGLAIVSVLMMTSLQTGTGTLSMIGIVQAQQAQGSW 205 Query: 171 QSIPLVL----ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 A A A E + PFDL EAE EL G +EYSG + + G + Sbjct: 206 FIFKFFPTGLVAFVIFAIAMVAETNRAPFDLPEAESELTAGFHTEYSGFRWSLFFLGEYV 265 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIA 272 + V + V +++ A V + V+A Sbjct: 266 AMIAVSSIAVTLWLGGWLRPFPNALSGATWDFAFSVFPALLFFVLA 311 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 24/76 (31%) Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + V + + + + + K+ V + + + + R R D +I Sbjct: 334 LGIFGVLLGMIGAVLLIPAVRVRVSDIFWFSAKVGVFMYLYIWYRGTFPRYRFDQLMKIG 393 Query: 291 WAGFGFAFLAFVSLLA 306 W L + + A Sbjct: 394 WKVLLPVSLGVLIVTA 409 >UniRef50_Q85MD1 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Monoblepharidales RepID=Q85MD1_9FUNG Length = 297 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 112/308 (36%), Gaps = 29/308 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + LI AL + ++ R + R GP G+LQ + D +KL+ +++V P Sbjct: 1 MKSLIVALPIVLAVAFMTLAERKLMGAIQRRIGPNSVGFLGLLQPFFDGVKLILKETVLP 60 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 +++ W+F P+ + L +P+ + ++ LL + ++ + SG Sbjct: 61 LESNHWIFVFAPFFTFYLALLNWLVIPLDKGLVLMDLEASILYLLAVSSLGVYGIIYSGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 S +T +G+ R V E + L + S N+ I L PL Sbjct: 121 AANSKWTLLGSLRSTAQMVSYEVSMSLIVLTVVYAGASVNLVEIAYLQS--GLMFIWPLW 178 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E + P DL EAE EL G ++E+S F + + + + Sbjct: 179 PIAIIAFIAGLAETNRAPMDLPEAESELVAGFMTEHSAISFTFLFLAEYTNIITMSTVIS 238 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F+ + + + S+ RLR D R+ W Sbjct: 239 LYFLGFYNP--------------------FLIYLFIWVRASLPRLRFDQLLRLGWVYLLP 278 Query: 297 AFLAFVSL 304 +AF+ + Sbjct: 279 ILIAFLLI 286 >UniRef50_D0LPX2 NADH dehydrogenase (Quinone) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX2_HALO1 Length = 373 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 119/354 (33%), Gaps = 54/354 (15%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLLGRQ 53 + + + VA LL+ R A + +R GP G+L D +K++ ++ Sbjct: 15 WLFVVLAFVMPVASLLTWAERRQSAMMQDRLGPNRANIGPIKLWGILHFVADALKMIKKE 74 Query: 54 SVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSP---------------------- 90 P +A +F + P + + +L +P P Sbjct: 75 DFIPANAHKQLFGMAPVLALAPVLVAFAIVPFGPTIYPEFFGTALPALLPEGTPSIRLQM 134 Query: 91 LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQ 150 ++ + +IA F I+G + + + +G R + + E + L L Sbjct: 135 FAPDYGILFYFAILSIANFGATIAGWASYNKWALLGGLRASSQMMSYEVAMGLSLMGVFL 194 Query: 151 VAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLS 210 V G+ + + + + +A A E + PFDL E E E+ G Sbjct: 195 VMGTLDPGAMVEWQGTH-TWGIVVQPVAFFLFFTAAIAETKRGPFDLPEGEPEII-GYFV 252 Query: 211 EYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG------------------ 252 EYSG +G+ ++ + V + VF + A G Sbjct: 253 EYSGMRWGMFFLAEFIEIVFVAMILTTVFFGGYHVPFMDADGVFRAFGLESTWQATHGMV 312 Query: 253 LLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 ++L LV +K + + ++ R R D + W L + + A Sbjct: 313 VVLQLVTFGLKTLFFCSLQLAIRWTLPRFRADQLMELGWKKLLPLALVNLMVTA 366 >UniRef50_A9RAG3 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Saccharomycetales RepID=NU1M_DEBHA Length = 312 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 103/300 (34%), Gaps = 21/300 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M+ + L+ L + L+ R + R GP GVL D KLL ++ Sbjct: 1 MNFMELLLFVLSMLLAVAFLTVAERKTLGYMQRRVGPNAVGYYGVLMAMADAAKLLLKEM 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A ++ ++P + + L +P + + + L + ++ F Sbjct: 61 ILPTHADKFMLIMSPMMTLMSALLCWAMIPFGPGITIMDSNYGFMLALAMGSVGVFGSLF 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S ++ IG+ R + E +L + + + G+ N S + + Sbjct: 121 AGWAGNSKYSTIGSMRSTAQLISYELVLTTVILICMLLTGTMNTSRYVELQESM--WLVV 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ E + PFD EAE EL G ++EYS S F + L Sbjct: 179 PLLPLSLMWFMGCVAECARPPFDNVEAESELVSGHMTEYSSSMFVLFFLSEYASMLFYST 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F +I +K + R+R D + W Sbjct: 239 LTAILFF------------GGGTGLILGLKANFFAFTYIWVRAATPRVRYDKLIAMCWIV 286 >UniRef50_C7U009 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pichia farinosa RepID=C7U009_PICFA Length = 313 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 105/312 (33%), Gaps = 21/312 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +++ L+ + L+ R A + R GP G+L D KLL ++ Sbjct: 3 LNMAELLMFMTSMTLAVAFLTVAERKTLAYMQRRVGPNAVGYYGLLMAMADAAKLLLKEM 62 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A ++ ++P + + T +P + I L + ++ F Sbjct: 63 ILPTHADKFILLMSPVITLVSATTSWAVIPFAPGVTIFDSNYGFIISLAMGSVGVFGSLF 122 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S ++ +G+ R + E +L + + G+ N+S + + + Sbjct: 123 AGWSANSKYSLLGSIRATAQMISYELVLTTVMLMCMLFGGTMNLSRYVELQET--IWFFL 180 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ E + PFD EAE EL G ++EYS S F + Sbjct: 181 PLLPTSIIWFMGCVAECARPPFDNVEAESELVSGHMTEYSSSIFVTFFTSEYASMTYLST 240 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F I +K + R+R D + W Sbjct: 241 VTAILFF------------GGGTGTITGLKANFFAFSYIWVRATTPRVRYDKLINLCWMI 288 Query: 294 FGFAFLAFVSLL 305 F AF + Sbjct: 289 FLPTLFAFAMFI 300 >UniRef50_Q8TQP1 F(420)H(2) oxidoreductase subunit H n=3 Tax=Methanosarcinales RepID=FPOH_METAC Length = 348 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 21/308 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ +F A + R A + R GP G+LQ D IKL ++ + P Sbjct: 21 VVGLVLVGAIFLGAMGAVWLERKLSADIQFRYGPSRVGKFGLLQLVADAIKLFTKEDMRP 80 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGS--------PLPQLGDLITLLYLFAIAR 108 +A +F P M+ + + A+PV V ++ + + AI Sbjct: 81 RNADRLLFDNAPIFMMSSVFLMLVAIPVGAVFINGVEYPLAVTEMDISVLYIEAMSAITI 140 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 F + + + ++ +GA R V E L + + A + GS NI I Sbjct: 141 FGIFMIAYGSNNKYSLLGAFRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIASAQ--GL 198 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 L + A +MG+LPFD E+E+EL G ++EY+G FG+ + + Sbjct: 199 LWNIFLQPIGFIVFFIALMADMGRLPFDQNESEEELVAGWITEYTGMRFGLGFFAEYIHM 258 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALV----IAIVKLVVGVLVIALFENSMARLRLD 284 ++ + +F+ + F A +L L+ ++K V+ ++ I ++ R R+D Sbjct: 259 ILGSFLVALLFLGGWNVPAFVANNPVLGLIAPTGFFLLKTVLVLMTIIGMRWAVPRFRID 318 Query: 285 ITPRITWA 292 ++W Sbjct: 319 QVVDLSWK 326 >UniRef50_Q6JP41 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=2 Tax=Embryophyta RepID=Q6JP41_9BRYO Length = 285 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 9/212 (4%) Query: 31 LHNRRGP------GVLQEYRDIIKLLGRQSVGPDASG-WVFRLTPYVMVGVMLTIATALP 83 + R+GP G+LQ D +KL+ ++ + P ++ ++F + P + + L +P Sbjct: 2 MQRRKGPNAVGLFGLLQPLADGLKLMIKEPILPSSANLFIFIMAPVITFMLSLVAWAVIP 61 Query: 84 VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 ++ L + ++ + +G + S + +GA R A V E + L Sbjct: 62 FDYGMVLSDLNVGILYLFAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGL 121 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQE 203 + GS N S I + IPL + E + PFDL EAE E Sbjct: 122 IIITVLIRVGSCNFSEIVIAQKQ--IWFGIPLFPVFIMFFISCSAETNRAPFDLPEAEAE 179 Query: 204 LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L G EYS GF + G +++ +M Sbjct: 180 LVAGYNVEYSSMGFALFFLGEYANMILMSRMT 211 >UniRef50_Q2WGD5 NADH dehydrogenase subunit 1 n=2 Tax=Tracheophyta RepID=Q2WGD5_SELUN Length = 331 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 99/306 (32%), Gaps = 31/306 (10%) Query: 23 ITRVARARLHNRRGPG------VLQEYRDIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVM 75 + R A + R GPG ++Q D +K L ++ + P W F + P +++ + Sbjct: 9 LERKISAGIQQRIGPGYAGPLGIIQALADGVKPLFKEDIIPSKGDPWSFSIGPAMVIAPV 68 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 + +P + + + +IA ++G + + ++ G R A Sbjct: 69 PVGHSVIPSGHSIVLADPGTGVPSRIAASSIAPLGPPMTGYGSNNKYSFSGGPRAAAQST 128 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP--LVLALCACAFATFIEMGKL 193 E L + + ++ S + + + + P + L A E +L Sbjct: 129 SYEIPSALRVSPISLLSSSLSTVDTVEAQPKYGFWGWNPRRQPIGLVAFPIPPSAERERL 188 Query: 194 PFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGL 253 P DL EAE+E G +EY G+ G L F VF P G + Sbjct: 189 PSDLPEAEEESAAGHQTEYPGTKSGSSYVAPHPNPLASSS-FATVFHPGGWNDPSIPPHP 247 Query: 254 LLALV---------------------IAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 L +A+ K V + R+R+D + Sbjct: 248 ALGFGNPSSGMTDGAAEVISAAVGITVALAKAHSPSSVTITARRTSPRVRMDQPLDLGRK 307 Query: 293 GFGFAF 298 Sbjct: 308 SPLPIA 313 >UniRef50_C5EY55 NADH-quinone oxidoreductase subunit H n=2 Tax=Helicobacter RepID=C5EY55_9HELI Length = 335 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 124/323 (38%), Gaps = 25/323 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +++ ++ L+ A+A + I R A R GP GVLQ D IKL ++ + Sbjct: 8 TLIKVILVVLIFSALAGFATYIERKMLAFFQRRLGPMVVGPFGVLQILADGIKLFTKEDI 67 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFA 105 P A+ +FR+ P + +P ++ +L + A Sbjct: 68 VPSGANRLIFRIAPVITAATAFIAMAPIPFFPEFEIFGRVVQPIIADINVGILFVLGVGA 127 Query: 106 IARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY 165 + ++G+ S ++ +GA+R A+ + E + L L + GS ++ +I + Sbjct: 128 AGLYGPLLAGISANSKYSLLGAARTAIQLLSFEVVSGLSLLAPIMLVGSLSLIDINNYQE 187 Query: 166 HWP-LSQSIPLVLALCACAFATFI---EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMK 221 LA FA + E+ + PFDL E E E+ G +EY+G +G+ Sbjct: 188 GSITNWLIFSQPLAFVLFLFAGYAGYAELNRTPFDLLEHEAEVVAGYATEYAGMRWGMFF 247 Query: 222 WGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARL 281 G + + + +F+ F + + ++K++ + + + + Sbjct: 248 IGEYANMISLSFVISLLFLGGFNPLWF-----IPGGIAILLKVMFFIFLFMWARAAYPHI 302 Query: 282 RLDITPRITWAGFGFAFLAFVSL 304 R D + W L + + Sbjct: 303 RPDQLMGLCWKVLFPLALLNIVI 325 >UniRef50_B3T913 Putative NADH dehydrogenase n=2 Tax=environmental samples RepID=B3T913_9ARCH Length = 436 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 123/343 (35%), Gaps = 41/343 (11%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVG 56 + +A + + R A+L R GP G+LQ D +KL+ ++ + Sbjct: 83 VVAFPGFGFAALIAAAVIFVERKMLAKLQLRVGPFYCGKVEGILQIMGDGLKLISKEIII 142 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F P + +PV L+ + + ++G Sbjct: 143 PAKADKPIFWAVPVLFAATAGAFVALIPVAPGWVVADIDLGLLAVFAVIGFFPIITVLAG 202 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S F IG R V E L+L L + G+ N+S I ++ ++P I + Sbjct: 203 WSSNSKFPFIGGIRALYQMVSFEIPLILSLLGIVMLTGTLNLSEIVESQVNFPW--IIFM 260 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E+ ++PFDL EAE E+ G L+E SG +G+++ G LK +F Sbjct: 261 PIGAIVFFICILAELERIPFDLPEAESEIVAGWLTELSGMMYGLVQLGSYLKLYAFAGLF 320 Query: 236 VGVFIPWGQME-------------------------------TFTAGGLLLALVIAIVKL 264 V +F+ AG ++ + I+K Sbjct: 321 VVLFLGGWNGPSVFPMEPMAKVITDGIVIMPDALVIKDIPGLPLFAGEMINGTIWFILKT 380 Query: 265 VVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 + I L R+R+D+ +I W + + A Sbjct: 381 AAVIFFILLPRGVFPRVRIDLLLKIGWYKLIVLAFVNIFIALA 423 >UniRef50_D2RZ82 NADH dehydrogenase (Quinone) n=6 Tax=Halobacteriaceae RepID=D2RZ82_9EURY Length = 364 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 118/320 (36%), Gaps = 20/320 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLH-----NRRGPG-VLQEYRDIIKLLGRQSVG 56 + +I L+L R A NR GPG + D ++LL ++ V Sbjct: 42 LAAFVIGNLMLAMTGVAGPWAKRKITAAFTDRIAVNRLGPGGIFIILADSVRLLSKELVV 101 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +A + L P ++ G L +P+ + L + + IA ++G Sbjct: 102 PENADRPAYDLAPIIVAGSALLGFAVIPMGSGIHLADPEVGLAYVFAVSGIASLGLVMAG 161 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW-------- 167 + + ++ IG R + E L++ AG+ +S I Sbjct: 162 YASANKYSLIGGLRAVAQNIAYEIPLVVTGMSVVIFAGTLQMSEIVAAQAEPLVSFAGLD 221 Query: 168 -PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISL 226 P ++ A A F E+G+ PFD EA E+ G +EYS F ++ G L Sbjct: 222 IPRWYALVNPFAFVLFLIANFAEVGRNPFDTPEAPTEIVAGYQTEYSSVYFVLIYLGEFL 281 Query: 227 KQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 + + +F G L +V IVK+ L+ +++ R+R+D Sbjct: 282 HIFLGGGIIATIF----LGGPAGPGPAALGIVWFIVKIWAIFLLTQWLRSAVPRVRIDQL 337 Query: 287 PRITWAGFGFAFLAFVSLLA 306 I W G A + L A Sbjct: 338 IEIGWKGLLVLSFANLILTA 357 >UniRef50_Q466B1 F(420)H(2) oxidoreductase subunit H n=2 Tax=Methanosarcina RepID=FPOH_METBF Length = 346 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 21/308 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ V+F A + R A + R GP G+LQ D IKL ++ + P Sbjct: 19 IVGLVLIGVIFMGAMGAVWLERKLSADIQTRMGPCRVGKYGLLQLVADAIKLFTKEDLKP 78 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGS--------PLPQLGDLITLLYLFAIAR 108 +A +F M+G + + ALPV V ++ + + A++ Sbjct: 79 LNADSLLFNNANIFMLGSVFLMLVALPVGAVFINGVEYPLAVTQMDISVLYIEAVSALSI 138 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 F + + + ++ +GA R V E L + + A + GS NI +I+ Sbjct: 139 FGIFMVAYGSNNKYSLLGAFRNFARMVGYEVPLGITVISVAAMTGSLNIVDISTAQGLH- 197 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 L + +MG+LPFD E+E+EL G ++EY G FG+ + + Sbjct: 198 -WNIFLQPLGCFVFFVSLMADMGRLPFDQNESEEELIAGWITEYCGMRFGLGFFAEYIHM 256 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALV----IAIVKLVVGVLVIALFENSMARLRLD 284 ++ + +F+ + F A ++ IVK+V ++VI ++ R R+D Sbjct: 257 ILGSFLVALLFLGGWNVPGFIANNSFFGIIVPTGFLIVKVVFVLMVIIGLRWAVPRFRID 316 Query: 285 ITPRITWA 292 ++W Sbjct: 317 QVVDLSWK 324 >UniRef50_C7NUN6 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN6_HALUD Length = 328 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 4/310 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DA 59 + L LF A + R ARL NR GP LQ D +KLL ++S P +A Sbjct: 11 LLYLLVFPGFAFLFTYALAAEYVDRKLYARLQNRVGPPPLQPLADFLKLLAKESAVPENA 70 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + ++R P + +LT +PV + + + GDL+ +L+L ++ F G +G Sbjct: 71 TERIYRAAPLTGLAGVLTAMLYIPVWSEAAAMSFEGDLVVVLFLLSLPSFSLFFGGWYSG 130 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 + F+ +G +R E L + A AG+ +S+I V P + + A Sbjct: 131 NVFSQVGTTRTITQLFGYEIPFFLACFAPAVAAGTLELSSIVAFVGSNP-AYVVVFAPAF 189 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 + ++ ++PFD EAE EL G L+EYSG + + ++ +V + +F Sbjct: 190 VIGLLSLQAKLERIPFDAPEAESELATGALAEYSGRKLALFRLTKDVELVVGAALLSALF 249 Query: 240 IPWGQMETF--TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 + GG +L + + +VK + V V+++ + +ARLR++ + + Sbjct: 250 LGGPYPVGAIEGIGGAVLGIAVFLVKTLAIVAVLSVLKGVLARLRIEQVVDVFYRWLVPI 309 Query: 298 FLAFVSLLAA 307 L + L+ A Sbjct: 310 GLVQIGLVLA 319 >UniRef50_Q642W4 NADH-ubiquinone oxidoreductase chain 1 n=131 Tax=Protostomia RepID=Q642W4_9ANNE Length = 310 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 19/310 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + I L+ + + R + R+GP G+ Q D +KL ++ + Sbjct: 6 FIMIFINLLMALLAMAFYTLLERKVLGYIQLRKGPNKVSISGIPQPLSDAMKLFIKEPLS 65 Query: 57 PDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 +S + F P + ++L + + P L ++ L L ++ + +G Sbjct: 66 TTSSNFQAFCFAPMTTLLLILIMWSTYPYP--FPSLFFTLGILLFLCLSSLNVYTTLAAG 123 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E + L L A + S +++ + + + + + Sbjct: 124 WASNSKYALLGAVRSVAQTISYEVSMALVLISALMICNSFDLNKVLTSQMSPTM---LLM 180 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E + PFD E E EL G EY G GF ++ + + + Sbjct: 181 SPMFIMWFITCLAETNRAPFDFVEGESELVSGFNIEYGGGGFALLFMAEYASIIFMSMIS 240 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ + + + + + + ++ ++ R+R D TW Sbjct: 241 TNIFMMFQMPHEIM-------MFMFPLLICIFSVLFLWVRGALPRMRYDRLMNFTWKTLL 293 Query: 296 FAFLAFVSLL 305 + F+ + Sbjct: 294 PFSICFLMFM 303 >UniRef50_A1ALP6 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Bacteria RepID=A1ALP6_PELPD Length = 389 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 66/373 (17%), Positives = 127/373 (34%), Gaps = 68/373 (18%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----------------GVLQEYR 44 +++ V+ VA + + + R A + +R G G++ Sbjct: 8 YLIFMGYAIAVMAGVATIFTWVERKQSAIMADRIGANRCYLRIPFTNVKIVAWGLIHGIA 67 Query: 45 DIIKLLGRQSVGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSP------------- 90 D K+L +++ P + + L P++ + +L + +A+P P Sbjct: 68 DGSKMLLKENFTPTTYDRFCYNLAPWLALAPVLLVFSAIPFGGTLVPGKLIDPASFPQLS 127 Query: 91 ----------------LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134 ++ +L + I ++G + + F+ +GA+R A Sbjct: 128 QIMVNFFGDKSYVMQVARLDAGILVILAISGIGILGTMLAGWSSNNKFSLLGAARAASQM 187 Query: 135 VLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW-----PLSQSIPLVLALCACAFATFIE 189 + E + L L G+ +++++ P I LA A E Sbjct: 188 ISYEVSMGLALISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGIILQPLAFVLFLTACIAE 247 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT 249 ++PFDL E E EL G +EY+ G+ ++ +VV + V VF+ + T Sbjct: 248 NKRVPFDLPECESELVSGYFTEYTAMKMGIFMLSEFIEIVVVSALLVTVFLGGYNLPYLT 307 Query: 250 AGGLLLA----------------LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 G +L +V +VK+ + S+ R R D R W Sbjct: 308 DAGFVLPMGKTIALSHATVVLVQIVTFLVKVFLIGCFQIQIRWSVPRFRYDQLMRFGWKF 367 Query: 294 FGFAFLAFVSLLA 306 + A Sbjct: 368 LLPLAALNLVATA 380 >UniRef50_B2ULY6 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=B2ULY6_AKKM8 Length = 422 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 124/392 (31%), Gaps = 87/392 (22%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------------------------- 37 ++ +I + P+ I R A + +R GP Sbjct: 25 LIKIVICFAITILFIPVCVYIERRVAAWIQDRVGPNRAGIPLSIFRRFGMKSDLPFKKTL 84 Query: 38 ---------------------------GVLQEYRDIIKLLGRQSVGPDASGWV-FRLTPY 69 G++Q D KL +Q P V F + P Sbjct: 85 DYFGLPHDGKIANLCRFFRLDRDIPIFGLVQPMVDGGKLFLKQDFTPPFVRRVYFWIAPI 144 Query: 70 VMVGVMLTIATALPVVT---------VGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +++ L A +P + + + + +++ + ++G + S Sbjct: 145 LVLAPPLMTAAVVPFAGDLQTSYGNVNMAVANLSVGPLWMFAISSLSVYGLVLAGWSSNS 204 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL----------- 169 F +G R + + E + L + + + ++SNI + Sbjct: 205 KFPFLGGVRSSAQMISYEISMGLSIIPVLMIYSTLDLSNIVEYQAANGWLLLPVWGEGLS 264 Query: 170 ----SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGIS 225 +P+ ++ + F E + PFD++E E +L G +EYS F G Sbjct: 265 WQRWILLVPVAISFIIFLTSIFAEANRTPFDMSECETDLVGGYHTEYSSMKFAQFFMGEY 324 Query: 226 LKQLVVLQMFVGVFIPWGQMETFTAGGL----------LLALVIAIVKLVVGVLVIALFE 275 +V + + +F+ + G L + L+ ++KL+ Sbjct: 325 AAMVVGSSLVITLFLGGWSIGFGLDGWLNENVANWVAVICQLIAYVLKLLFFAFFFVWVR 384 Query: 276 NSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 ++ R R D ++ W F + + L AA Sbjct: 385 WTLPRFRYDQVMKLGWMVFFELAVINIFLTAA 416 >UniRef50_B1ZRS6 NADH dehydrogenase (Quinone) n=3 Tax=Verrucomicrobia RepID=B1ZRS6_OPITP Length = 414 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 120/362 (33%), Gaps = 57/362 (15%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP---------------------GVLQ 41 +L L LV+F +A + S R A + +R GP G+ Sbjct: 16 LLKGLAVILVIFPIAGICSMAERKVAAWVQDRPGPNRAIVPWIGWIPFLGRFLQRLGLFH 75 Query: 42 EYRDIIKLLGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVG---------SPL 91 D K+L ++ P + + F P + + LT T +P Sbjct: 76 VMADGGKMLFKEDSTPGHVNKFYFIAAPILAMIPALTTVTVVPFGAYLDEAGRLIALGLA 135 Query: 92 PQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQV 151 P ++ + + +++ + ++G + S + +G+ R + + E + L + Sbjct: 136 PVDIGILGVFAVASLSVYSLILAGWASNSKYPFLGSIRASAQLISYELSMTLAVLPVFLW 195 Query: 152 AGS------TNISNITDTVYHWP-----LSQSIPLVLALCACAFATFIEMGKLPFDLAEA 200 + + + L + ++ A F E + PFD E+ Sbjct: 196 INTPGAEATMGFTRAVEMQSGTFPQLNGLWFGFYMPVSAFIFLVALFAETNRQPFDTIES 255 Query: 201 EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLL------ 254 E +L +EY +G+ +V +F+ +F + L Sbjct: 256 EADLVGSFHTEYGAFKWGLFFVAEYSHMIVGSAVFMLLFGGGWNPLPWLPLTTLAEWLNL 315 Query: 255 ---------LALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 L++VI + K++ + ++ R R D +I W +A + Sbjct: 316 TSHPFLLGVLSIVIFLAKVLAMIFFFMWVRWTLPRFRYDQVMQIGWRKLLPLSIANLIFY 375 Query: 306 AA 307 AA Sbjct: 376 AA 377 >UniRef50_Q766W0 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Pancrustacea RepID=Q766W0_VARHI Length = 318 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 118/312 (37%), Gaps = 25/312 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ L+Q + + + + R R+GP G+LQ + D +KL ++ V Sbjct: 18 IVGYLMQWVGVLMGVAFFTLLERKILGYAGMRKGPNKVGYIGILQPFADAVKLFTKEDVV 77 Query: 57 PDASG-WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P S ++ ++P + + + L + P VG + + + + +SG Sbjct: 78 PMKSSVMLYMISPVLALFMPLCMWCVFPYWFVGVEFSWGW--LYVFCGLGMGVYSLFLSG 135 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +G+ R + E +L + + + GS ++ ++ + + L Sbjct: 136 WSSNSKYAVMGSLRAVAQMISYEVVLAMVVMLFVFFLGSYDMG-----LWGYTSLLGVGL 190 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + L E + PFDLAE E EL G +EYSG GF ++ G L++ + Sbjct: 191 LPLLWIWMTVMLGESQRSPFDLAEGESELVSGFNTEYSGVGFALLFMGEYGAMLLMSMLS 250 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F+ ++ + V L V + R+R D + W Sbjct: 251 SVLFLG-----------SVVDSIFFPVVLWFFGFVYLWARATFPRVRYDQLMYLAWKSLL 299 Query: 296 FAFLAFVSLLAA 307 L + + Sbjct: 300 PNLLWLTVVSVS 311 >UniRef50_Q96186 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=Protostomia RepID=NU1M_PECMA Length = 354 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 120/313 (38%), Gaps = 11/313 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 ++ + L +V+ L+ R A R+GP G++Q + D IKL ++ Sbjct: 42 ALFWSLSFYVVVLLSVAYLTLFERKVLAASQVRKGPEMVGWLGIMQPFADGIKLFSKEYF 101 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P S +F L P M+ + P + G + +L + ++ + + Sbjct: 102 TPSNSNPALFFLGPCFMLLHSFILWGCSPGIWGCGVYFFWGG-LYVLSVLSVGVYGVVLC 160 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + GA R + E ML+ V GS ++ +++ + + Sbjct: 161 GWSSNSRYAMFGAVRALAQVISYEVMLVFLYLCPFFVVGSLDLESVSLSQVSGCNGGVLF 220 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 LVL F E + PFD E E EL G EY GF ++ L + + Sbjct: 221 LVLPW--WVFCVLAESNRAPFDFVEGESELVSGFNVEYGSGGFAMIFIAEYSNILFLSTL 278 Query: 235 FVGVFIPWGQMETFT-AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F+ G + GL+ + VI + V +I L +S R R D+ ++ W Sbjct: 279 TSVLFLGGGNLLGNGEYFGLISSSVIGSFFSFMVVFLIVLCRSSFPRYRYDMLMKLIWCQ 338 Query: 294 FGFAFLAFVSLLA 306 ++ +L Sbjct: 339 ILPILMSCFALFL 351 >UniRef50_P11658 NADH-ubiquinone oxidoreductase chain 1 n=11 Tax=Chlamydomonadales RepID=NU1M_CHLRE Length = 292 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 102/314 (32%), Gaps = 32/314 (10%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M V LI + + + + R A + R GP G+LQ + D +KL ++ Sbjct: 1 MIVASILILIVPVLLSVAMFTLAERTVMASMQRRFGPQVSGISGLLQPFWDGLKLGVKEP 60 Query: 55 VGPDASGWVFRLT-PYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V PD+S P + + + + ++ + ++A + + Sbjct: 61 VLPDSSSAGAFAASPMISFVLSQVAWVGI------CISDASFQGLVIMAISSLAVYGVML 114 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S + +G R L V E L L + P + Sbjct: 115 AGWASNSKYAFLGCLRSVALMVSYELSLGAALLSIGLFV-TDGTGMKCLNFAEMPTTPQY 173 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 ++ E + PFDL EA EL G EYS GF + V+ Sbjct: 174 AMLPLCLIFLVCILAETKRDPFDLPEA--ELVAGYNVEYSSLGFALFFIAEYANMAVMSA 231 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + F+ +K+ ++ R R D R+ W Sbjct: 232 IASIYFLGGFSA----------------LKITALFFAFVWTRGTLPRYRYDQFMRLGWKA 275 Query: 294 FGFAFLAFVSLLAA 307 F LAF +L A+ Sbjct: 276 FLPLTLAFFALHAS 289 >UniRef50_P18929 NADH-ubiquinone oxidoreductase chain 1 n=2879 Tax=root RepID=NU1M_DROME Length = 312 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 22/303 (7%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWV-F 64 + L+ + R + R+GP G+ Q + D IKL ++ P S ++ + Sbjct: 16 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSY 75 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 ++P + + L + +P G + L ++ + ++G + S + Sbjct: 76 YISPIFSLFLSLFVWMCMPFFVKLYSFNLGG--LFFLCCTSLGVYTVMVAGWSSNSNYAL 133 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G R + E L L L + GS N+ + I L Sbjct: 134 LGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYM--WFLIILFPMALVWVS 191 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 + E + PFD AE E EL G EYS G ++ L + +F +F+P Sbjct: 192 ISLAETNRNPFDFAEGESELVSGFNVEYSSGGLALIFMAEYASILFMSMLFCVIFLPCDV 251 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 ++ +KL V ++ R R D + W F L ++ Sbjct: 252 FN-----------LLIYMKLTFISFVFIWVRGTLPRFRYDKLMYLAWKCFLSFSLNYLLF 300 Query: 305 LAA 307 Sbjct: 301 FIG 303 >UniRef50_Q953X2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Terebratalia transversa RepID=Q953X2_9BILA Length = 300 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 119/312 (38%), Gaps = 29/312 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 SV Y L + + + + R NR+GP G LQ D +KLL + V Sbjct: 3 SVTYTLFTLVPILLSMAFFTLLERKILGYAQNRKGPNKVGVGGWLQPILDAVKLLSKDLV 62 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P +S F P M+ + L L + S ++ + + +++ + +S Sbjct: 63 SPSRSSKVGFFFAPVAMILLSLIFW--LNYWSAFSFSYLSKGVLYFMCVSSLSVYPVFMS 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + +GA R + E ++L + V + G +++ + + Sbjct: 121 GWASNSKYALLGAIRSVAQTISYEISMVLIILVPLCLVGGFDMNLM-----PGFFWVGVL 175 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 + A E + PFD AE E EL G EY G F ++ G + L + M Sbjct: 176 FPYMVLPWAVTVLAETNRAPFDFAEGESELVSGYNVEYGGVPFTLIFMGEYISILFLSLM 235 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ G + VK + +V L +++ RLR D+ +TW + Sbjct: 236 TAVLFMGTG---------------MVWVKTLGVAVVFVLVRSALPRLRYDLIMGLTWKCY 280 Query: 295 GFAFLAFVSLLA 306 L+ + L Sbjct: 281 LPVVLSLMVPLI 292 >UniRef50_A9A348 NADH dehydrogenase (Quinone) n=2 Tax=Thaumarchaeota RepID=A9A348_NITMS Length = 432 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 122/339 (35%), Gaps = 39/339 (11%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-------GVLQEYRDIIKLLGRQSVG 56 + +A + R A+L R GP G+LQ D +KL+ ++ + Sbjct: 83 VMAFPGFGFAALIAAATIFVERKMLAKLQLRVGPFYCGKIEGILQLMGDGLKLISKEIII 142 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F P + V +PV L+ + + +S Sbjct: 143 PAKADKPIFWAAPVIFVATAAAFVALIPVAPGWVVADVDLGLLGVFAVIGFFPIITILSA 202 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 S F IG R V E L+L L + G+ N+S I + ++P I L Sbjct: 203 WSANSKFPFIGGIRALFQMVSFEIPLILSLLGVVILTGTLNLSEIAASQSNFPW--IIFL 260 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E+ ++PFDL EAE E+ G L+E+SG +G+++ G LK +F Sbjct: 261 PVGAIVFFITMLAELERIPFDLPEAESEIVAGWLTEFSGMMYGLVQLGTYLKLYAFAGLF 320 Query: 236 VGVFIPWGQMETFTAGGL---------------------------LLALVIAIVKLVVGV 268 V +F+ L + ++K V + Sbjct: 321 VVLFLGGWNGPMVVPPFPEEFLTGVEMGPLTVGPFPGLPLFDQEMLNGTLWFVLKTVGVI 380 Query: 269 LVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 I L R+R+D+ + W LAFV++ A Sbjct: 381 FFILLPRGVFPRIRIDMLLSLGWTKLI--GLAFVNIFIA 417 >UniRef50_A1AUU5 Membrane bound hydrogenase subunit mbhM n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUU5_PELPD Length = 313 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 7/304 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-ASGW 62 L L L + R AR+ NR+GP Q + D IKL ++ + P+ A + Sbjct: 8 LLIFPGFLFLSLAGMVAEFCDRKLYARMQNRQGPPWFQPFADFIKLSSKEDIIPEEADPF 67 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL P V + + +P+ G+ L GDL+ ++YL I F ++G + S + Sbjct: 68 MFRLMPLVALAASVCAILYIPIWGRGALLSFEGDLVIVVYLLTIPTMTFFLAGWYSASLY 127 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IGA R + E L L L A +A S +++ + P + + ++ Sbjct: 128 SMIGAVRSLTQLLAYEVPLYLALLAPACLADSWSLAGMAAYYGAHP-WRWLLNLIGFGVG 186 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 ++ K+PFD EAE E+ G +EYSG + + IS++ +V+ + VF+P+ Sbjct: 187 LVVMLGKLEKVPFDTPEAETEIVAGAFTEYSGRLLALFRMAISIEMIVLASLLAAVFLPF 246 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G G L ++ ++K+ + + + + AR R+D W A + + Sbjct: 247 GLG-----LGPLAGFLLYLLKIALIIAMTSFLRTIFARFRIDQMVDFCWRYVASAAMLQL 301 Query: 303 SLLA 306 ++ Sbjct: 302 VIVI 305 >UniRef50_Q9T7K1 NADH-ubiquinone oxidoreductase chain 1 n=7 Tax=Crassostrea RepID=Q9T7K1_CRAGI Length = 340 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 107/310 (34%), Gaps = 17/310 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L + + + R + L R GP G+ Q D +KL ++ V Sbjct: 35 FFNIIFIYLGVLVSVAYFTLMERKCLSSLGIRLGPDKISFAGLAQPISDGMKLFTKEFVA 94 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +++ F L P V + + P + + D++ L + ++ +SG Sbjct: 95 PSNSAKLGFFLIPCVAMLLCFLGWQIYPCSSTSPSM--GNDILFFLVVSSVNAHVAIMSG 152 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + ++G R + E L + L +GS + +++D+ W + + Sbjct: 153 WTSSSKYASVGGVRGFAQVISYEICLSITLVAVMFFSGSMSFFSLSDS--GWSMWWGLYC 210 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E + PFDL EAE EL G +E+S F + L++ + Sbjct: 211 APVAALWVVICLAEANRAPFDLVEAESELVSGFNTEFSAGSFAGLFIAEYGMILLMCLVT 270 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V F T +L V K+++ S R R D W Sbjct: 271 VWSFF------QNTCVWTVLGSVWMFTKILMFTFFFIWTRASFPRFRYDQLMMAAWKTLL 324 Query: 296 FAFLAFVSLL 305 L + Sbjct: 325 PFVLGIYCVF 334 >UniRef50_C7MLM2 Formate hydrogenlyase subunit 4 n=2 Tax=Coriobacteriaceae RepID=C7MLM2_CRYCD Length = 309 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 202/305 (66%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ ++QA++L +APL SG R RA++H RRGP LQ+Y D+IKL+ RQ + S + Sbjct: 4 IIIAIVQAVLLTLLAPLFSGTARWMRAKMHTRRGPSPLQDYYDLIKLIKRQDLHTKDSSF 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 V RL P + +G ML +A +P++T SP+P L D+IT++YL A+ RFFFA++G+D+ + Sbjct: 64 VSRLMPPLFLGSMLILACGMPMITRLSPVPVLADIITIIYLLALPRFFFALAGVDSSDAY 123 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G RE ++GVLVEP ++L L+VAA G+TN+ + + ++ I +V+A A Sbjct: 124 AGVGGIRELLVGVLVEPSMMLALFVAALACGTTNVGLMGAQIAEGNVTSPIAVVIAGVAF 183 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A A +IE+GKLPFD AEAEQE+QEGPL EYSG+ ++K +S+KQ++V+ FV +F+P+ Sbjct: 184 AMACYIELGKLPFDAAEAEQEIQEGPLQEYSGTSLSMVKLSMSMKQILVISWFVAIFLPF 243 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G T LL+ V+ +VK+ V L+ ++FEN +AR+R +T R TW G A +A V Sbjct: 244 GSAATLAPMDLLVGAVLFLVKITVIGLICSIFENVVARVRWKLTGRQTWTVVGVAVMALV 303 Query: 303 SLLAA 307 ++ Sbjct: 304 FVVLG 308 >UniRef50_C7FEW4 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Ascomycota RepID=C7FEW4_BRECS Length = 352 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 116/324 (35%), Gaps = 26/324 (8%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 V Y L+ L + L+ R + R GP GVL + D +KLL ++ + Sbjct: 13 YVWYILLFILGVLLGVAYLTVAERKTMGYMQRRLGPNAVGYYGVLMAFADALKLLVKEII 72 Query: 56 GPDASGWVFRL-TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 WV+ + P + + +L + +P T L +I LL ++ I+ Sbjct: 73 VIRNGEWVYMVGAPLITLFAVLLSLSVIPFDTGLGILEGEYSIIFLLGTGSLGILGTVIA 132 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S +T + + R + E +L +++ + S NI I D+ + ++ IP Sbjct: 133 GWMSNSKYTVLASVRTTAQLISYELILTTVVFIMVLLVNSLNIETIIDSQVY--INYVIP 190 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L+ E + PFD EAE EL G ++E S S F + +++ + Sbjct: 191 LLPLALIYFIGALAENARPPFDNIEAESELVSGHMTELSASPFVIFFLSEYTSMVLMSML 250 Query: 235 FVGVFIPWGQMETFTA-----------------GGLLLALVIAIVKLVVGVLVIALFENS 277 F F LL + ++K + S Sbjct: 251 TSIFFFGGYLSWPFDINKLFFLDTLSFNNWYWLLEGLLFSSVFVIKTNFFLFTYIWVRAS 310 Query: 278 MARLRLDITPRITWAGFGFAFLAF 301 RLR D+ W AF Sbjct: 311 FPRLRFDLLILFCWYVLLPLLFAF 334 >UniRef50_A2T4Y1 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Tigriopus RepID=A2T4Y1_TIGCA Length = 306 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 109/299 (36%), Gaps = 22/299 (7%) Query: 13 LFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPD-ASGWVFR 65 + ++ + R R+GP GVLQ D IKL G++ + P ++ +F Sbjct: 15 MLVNVAFVTLMERKILGCAQFRKGPNKVSLGGVLQPIADAIKLFGKEIMSPSMSNSLLFS 74 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 + P + + V + I ++L + G + LI +L + ++ + ++G + + + + Sbjct: 75 VAPALGLVVFMLITSSLIGQSHGGFI--EYSLIYILCIMSLGVYPLFVAGWSSNNKYALL 132 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G+ R + E L L ++ + ++S + L+ + + + Sbjct: 133 GSLRGIAQSISYEISLSLIFLSLMLLSQTFSVSGFEHFLPSGCLTLFLS--PLMLLWLVS 190 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 E + PFD +E E EL G E+ G F M L +FI + Sbjct: 191 CLAETNRTPFDFSEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVWTSNMFIAGSSL 250 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 + G L V V ++ R R D + W L +V Sbjct: 251 SFSGSVGSL-----------VFVFFWMWTRATLPRFRYDKLMMLAWTSILPVSLGYVCF 298 >UniRef50_Q00860 NADH-ubiquinone oxidoreductase chain 1 n=32 Tax=Bilateria RepID=NU1M_MYTED Length = 305 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 110/305 (36%), Gaps = 23/305 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 +V+ +I + + + + R A + R+GP G+LQ + D KLL ++ + Sbjct: 5 AVIVSIIPFVGVLLAVGFYTLLERKILAIIMIRKGPSKVSYMGILQPFSDAGKLLCKEFI 64 Query: 56 GPDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + F L P +M+ + L P + +I + + +++ + +S Sbjct: 65 VPTRANVGPFILAPALMLAISLLGWLLYPYKSAEVFYVF--GVILFMVITSVSVYGVMMS 122 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S ++ +GA R + E + + +G I+ +P Sbjct: 123 GWASNSKYSLLGAVRAMAQSISYEIPMGFIFFCVVLCSGVFMFQEIS-VFQQSLFFFFLP 181 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L + + E + PFD E E EL G EYSG GF VM L+ M Sbjct: 182 LCVVMLVWMLCMLAETNRAPFDFVEGESELVSGYNVEYSGGGFAVMFIAEYSSILLSSVM 241 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F + ++V + + S+ RLR D + W Sbjct: 242 SAAMFFGGNEALVG-------------FFMMVFAIFFVVVRASLPRLRYDKLMNLCWTVL 288 Query: 295 GFAFL 299 L Sbjct: 289 LCVML 293 >UniRef50_A4E719 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E719_9ACTN Length = 307 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 124/296 (41%), Positives = 187/296 (63%), Gaps = 1/296 (0%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+++ + Q LV+ VAP SG+ RV RA++HNRRGP +LQ+YRD+ KL+ R S Sbjct: 1 MNIVLAMAQGLVVMLVAPFFSGLARVIRAKMHNRRGPSILQDYRDLAKLMARPESVSSDS 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +V R+ P + + V +A LP+ T+ SP+P GD IT++Y A++RFFFA+SG+D+ + Sbjct: 61 SFVLRIMPPLFLAVSFMLAMGLPMFTLQSPMPVFGDAITIMYALALSRFFFALSGVDSSN 120 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 + G RE ++ VL+EP +L+ L+ A V GST+I+ + + +S + ++LA Sbjct: 121 AYAGFGGIRELLMSVLIEPSMLIALFTVAIVCGSTDIATMGQHIVTGNVSSVVAVILAGV 180 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A A A ++E+GKLPFD AEAEQELQEGPL+E SG +MK + +KQ+VV+ F +FI Sbjct: 181 AFAAACYMELGKLPFDQAEAEQELQEGPLAELSGPSLAMMKLAMGMKQVVVVAWFTSIFI 240 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 PWG+ T L+ V+ +VK +V +V + ENS++R R + TWA G Sbjct: 241 PWGEPATIGV-TALVGAVVFLVKCLVDFVVCGVLENSVSRSRFKVLGNQTWAVVGI 295 >UniRef50_C1IWC6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dermatophagoides RepID=C1IWC6_DERPT Length = 299 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 115/311 (36%), Gaps = 26/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M L + + + + + R +H R+GP G+LQ D KLL +++ Sbjct: 1 MFYLSSIFSTIGVLLGIAFFTLVERKIMGIMHYRKGPNKVLIWGLLQPISDAAKLLTKET 60 Query: 55 VGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 +++ P + + +M++ ++ S L + +L + +++ F F + Sbjct: 61 SKLQPLKSFMYWSAPLLGMLLMMSCWLW--YESIFSLLSNKMKIFCILSIMSLSAFVFML 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 + + S ++ IG R + E ++ ++V + S + + + L Sbjct: 119 TSWGSNSKYSMIGGYRAISQIISYEVCFVIFIFVILYLMNSYSPMKMKMIQEN--LWLMF 176 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E + PFDLAE E E+ G EY G F ++ + + Sbjct: 177 LSLPLFFTWVVMCMAESNRTPFDLAEGESEIVSGFNIEYGGGLFALIFIMEYGMIMFLSF 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ + ++++K + + R+R D + W Sbjct: 237 LSTLIFLG---------------VSMSLLKTLTFCFLFIWIRCCFPRVRYDKLMNLCWKV 281 Query: 294 FGFAFLAFVSL 304 F L+ ++L Sbjct: 282 FLPYSLSVLTL 292 >UniRef50_B2KDT5 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B2KDT5_ELUMP Length = 322 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 8/298 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + + L L + R A++ NR+GP Q D IKLL ++ V P Sbjct: 11 LFYIAVYPGLLFLASYGLFCEWFDRKLYAQMQNRQGPHWYQPVADFIKLLSKEVVVPSNV 70 Query: 61 GW--VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDT 118 +F++ P+V + ++T A +P +V S + G+LI LYL I F + G + Sbjct: 71 TMVKMFKVLPFVAISAIVTTALMVPFHSVESVINFQGNLIAALYLLTIPTITFFLVGWTS 130 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLA 178 SP++AIG+ R E L+ + A +AGS NI++I PL ++ Sbjct: 131 QSPYSAIGSMRVLTQLFAYEIPLMTAMLSPAILAGSWNIADIALFFSANPL-LMFVNIIG 189 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 L A ++ ++PFD+ AE E+ G +EYSG +G ++ I ++ +VV + V Sbjct: 190 LFVSLIALQGKLERVPFDIPHAETEIVGGVFTEYSGRLYGFIQLAIDMEMVVVAALMNSV 249 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F + G + V+ IVK + V V++L ++ MAR+R++ W Sbjct: 250 F-----LGGSLGLGGIAGFVLFIVKTLAIVFVLSLIKSLMARVRIEQMINFCWKYLAP 302 >UniRef50_Q950Q6 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Chytridiomycetes RepID=Q950Q6_SPIPN Length = 301 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 29/311 (9%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ LI L + L++ R + R GP G+LQ + D IKL+ +++V Sbjct: 1 MIATLIVVLCVVLSVALMTLAERNIMGAMQRRIGPNKVGYLGLLQPFADGIKLILKETVL 60 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLL-YLFAIARFFFAIS 114 P ++S W+F P+V + L LP+ + LG I +L + ++ + S Sbjct: 61 PLESSHWLFLGAPFVTFYLALLNWLVLPLDYGVALSELLGGGILILIAISELSIYGVIYS 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G S + +G+ R + L L L G+ N+ +I P+S P Sbjct: 121 GWAANSKYPFLGSLRSTAQMISYSVSLSLILLTVIFTLGTVNLLDILAAQQ--PVSLFYP 178 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L+ + E + PFDL EAE EL G +E+S F G LV+ + Sbjct: 179 LLPMAILFMISAVAETNRAPFDLPEAESELVAGFFTEHSAVSFAYFFLGEYTSILVICTL 238 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 F +F + S+ARLR D R+ WA Sbjct: 239 FFILFFGVSAALP-------------------MIFFFIWLRASLARLRFDQLLRLGWAHI 279 Query: 295 GFAFLAFVSLL 305 +A++ L Sbjct: 280 LPFTIAYILFL 290 >UniRef50_Q68RL2 NADH-ubiquinone oxidoreductase chain 1 n=6 Tax=Arthropoda RepID=Q68RL2_9HEMI Length = 306 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 106/311 (34%), Gaps = 22/311 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 V+ ++ + L+ + R + R+GP GV Q + D +KL ++ + Sbjct: 5 VIGFILMLICSLISVAFLTLLERKLLGYVQLRKGPDSVGLWGVFQPFSDALKLFSKEYII 64 Query: 57 PDASGWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + F L+P + V L + P + ++ + + ++ + ISG Sbjct: 65 VQKINFFPFWLSPVFSLFVSLAVWFTFPYFYILCSWKL--SVLFMFCVLSLNVYSIMISG 122 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +G R V E + + GS N+ T + + Sbjct: 123 WSSNSSYATLGCIRSVAQSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCF--T 180 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 V + E+ + PFD +E E EL G EY G+ F + L + + Sbjct: 181 VPMFFMMFVSMLAELNRTPFDFSEGESELVSGFNIEYGGTSFAFLFLSEYLSIIFSSFLL 240 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 F L VK+V I L S+ R R D + W + Sbjct: 241 TLFF-----------CNSLNVNSFFFVKIVFFSFFIVLIRGSLPRYRYDKLMNLCWKSYL 289 Query: 296 FAFLAFVSLLA 306 L+F+ Sbjct: 290 GCTLSFIIFYL 300 >UniRef50_B5YKQ8 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ8_THEYD Length = 304 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 157/305 (51%), Gaps = 8/305 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + ++ L++ ++P G TR RA + +R GP LQ Y DIIKL+G++ + Sbjct: 7 IFSSIVNILIVLILSPFFDGFTRKVRALIQSRIGPPPLQSYYDIIKLMGKEDLK-STINP 65 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL+PY+ + + + +P+ + PL GD+ +Y+ + I+ + +PF Sbjct: 66 LFRLSPYLSIISIGMASLLIPITELTPPLNFWGDIFLFIYIITVVGIAIIITASASENPF 125 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 IGASR+ ML + VEP+L + L A AGS I +I ++++ ++ ++L+ Sbjct: 126 AYIGASRKMMLHLSVEPILAIALITGAINAGSFKIGDIV--LWYYSNGPNVSMLLSTVCV 183 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 + +GK+PFD++EAEQE+ EG L E SG + +KW +Q++ +F +F+PW Sbjct: 184 FLSLQALIGKIPFDISEAEQEIAEGVLIELSGPKYACVKWANMSRQVLFCLVFTQIFVPW 243 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 LL ++IA+VK+ + + L E RLR+D + F+ + + Sbjct: 244 PF-----LENDLLNILIALVKVTAIIFISTLIEALNPRLRIDQALKYNLTLALFSLTSIL 298 Query: 303 SLLAA 307 L Sbjct: 299 LALLG 303 >UniRef50_Q2IL08 Respiratory-chain NADH dehydrogenase, subunit 1 n=6 Tax=cellular organisms RepID=Q2IL08_ANADE Length = 460 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 109/339 (32%), Gaps = 49/339 (14%) Query: 14 FAVAPLLSGITRVARARLHNRRGP-----------GVLQEYRDIIKLLGRQSV-GPDASG 61 + LL+ R A + NR G G+ D +K+L ++ + + Sbjct: 72 MISSSLLTVAERKWSALIQNRIGANRIKVFGSALGGIPFLAADALKMLTKERIETTGRTR 131 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLG----------------------DLIT 99 ++ L P + + + +PV G L+ Sbjct: 132 VLYELAPMLAFAPVFALFAIIPVGQGIELNQIPGLAGAAAAGAVEQIALQVSRTDTGLLY 191 Query: 100 LLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN 159 L + ++ + A++G + + +G R + + E L L L + + Sbjct: 192 LFAIASLQVYGTALAGWASNNKLALLGGVRASSQMISYEVSLGLSLVGTMIAYRTLRLEE 251 Query: 160 ITDTVYHWPLS-----QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSG 214 + L + + + F E + PFDL E E E+ G EYSG Sbjct: 252 MVVAQGTPVLGPVPALGLLLQPIGFLIFFASAFAETKRAPFDLPEGESEIV-GYFVEYSG 310 Query: 215 SGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF---------TAGGLLLALVIAIVKLV 265 FG++ + +V+ + VF+ F + I K++ Sbjct: 311 MKFGLLFLAEFAEIVVLAGVITAVFLGGWHPILFEGWLRQNLTPFWFAAVGAGAFIAKMI 370 Query: 266 VGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 V + + + R R D ++ W A L V + Sbjct: 371 VMMWLQLTIRWLLPRFRFDQIQKLCWKLLLPAALVNVFV 409 >UniRef50_Q94QP9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Inversidens japanensis RepID=Q94QP9_9BIVA Length = 292 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 105/305 (34%), Gaps = 27/305 (8%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDA 59 +V L+ + R + + R+GP G+ Q D +KLL + + P Sbjct: 1 MAATVVVALVGMAFLTLLERKSLGYMQLRKGPNKLGLTGLPQPLADAMKLLTKTTSTPTI 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + ++ ++ + L+ T S + L+ + + A A + + G T Sbjct: 61 CNPI-AMSVAPLLALALSALLWHLYPTTHSVSHKSLGLLLFICISATAVYSIMVGGWSTN 119 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 S F +GA R + E ++L L ++ + ++S + + I + Sbjct: 120 SKFALLGAMRAMAQTISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLI--IPMT 177 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E + PFD AE E EL G EYSG+ F ++ L L + + + Sbjct: 178 LVWLTIMLAETNRAPFDFAEGESELVSGFNVEYSGTKFAMLFMAEYLNILFMGLLSSILL 237 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 + + L ++ R R D+ + W L Sbjct: 238 LNSTSWAP------------------LFTFFFLLARGTLPRHRYDLMMGMAWESLIPITL 279 Query: 300 AFVSL 304 F+ L Sbjct: 280 TFLLL 284 >UniRef50_P77858 Hydrogenase-4 component C n=193 Tax=Bacteria RepID=HYFC_ECOLI Length = 315 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 157/305 (51%), Positives = 219/305 (71%), Gaps = 1/305 (0%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 V++ L QA++L + PL +GI+R RAR+H+RRGPG+ Q+YRDI KL RQ V P +SG Sbjct: 11 VIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGL 70 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +FRL P+V++ ML +A ALP+ SP GDLITL+YL A+ RFFFA+SGLDTGSPF Sbjct: 71 MFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPF 130 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +GASRE LG+LVEPML+L L V A +AGST+I I++T+ + + VLAL AC Sbjct: 131 AGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLA-MGWNSPLTTVLALLAC 189 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 FA FIEMGK+PFD+AEAEQELQEGPL+EYSG+G + KWG+ LKQ+V+ +FV +F+P+ Sbjct: 190 GFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPF 249 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G+ + + LL +LV+ ++K+++ ++ ++ EN++AR R + +TW GF A LA+V Sbjct: 250 GRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWV 309 Query: 303 SLLAA 307 L Sbjct: 310 FWLTG 314 >UniRef50_Q8HQ04 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Arthropoda RepID=Q8HQ04_THRIM Length = 306 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 24/309 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ ++ L ++ + R + R GP G+LQ D +KL ++ Sbjct: 6 IMSLVMIILFSLVSVAFITLMERKILGYMQIRMGPNKVGLTGILQPMADAVKLYSKEINW 65 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P ++ F ++P + + + LT+ +P + + L+ L + + + ISG Sbjct: 66 PTQSNSMPFFISPCLSLTLALTLCLIMPYLKPW--INMKLSLLMFLAILGLGVYPILISG 123 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ IG+ R + E L+ L + ++ S + ++ +T L Sbjct: 124 WSSNSNYSLIGSMRALAQTISYEVSLVFILLSSLFISSSLSFYSLVETQK---LFYFFLF 180 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 ++ F+T E+ + PFD AE E EL G +E+S S F ++ L L+ + Sbjct: 181 IVPFYMWLFSTVAELNRTPFDFAEGESELVSGFNTEFSSSPFAIIFMAEYLMILIFSLLT 240 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 ++ ++++VK + + ++ R R D ++W Sbjct: 241 SMMYFCSNTN------------LLSMVKTMTMMFFFIWIRATLPRYRYDKLMNLSWKFIL 288 Query: 296 FAFLAFVSL 304 + + Sbjct: 289 PISTFNLFI 297 >UniRef50_A7H5S4 NADH-quinone oxidoreductase subunit H n=55 Tax=Epsilonproteobacteria RepID=NUOH_CAMJD Length = 332 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 114/306 (37%), Gaps = 22/306 (7%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDAS-GWVFRLTPYV 70 L + R A R GP G++Q D+IKL ++ + P S ++F + P + Sbjct: 27 GLATYAERKVLAYFQRRIGPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLI 86 Query: 71 MVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIARFFFAISGLDTGSP 121 A+P++ + L+ ++ + + + GL + + Sbjct: 87 SAICAFVSLAAIPMLPEFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNK 146 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVY-HWPLSQSIPLVLALC 180 ++ +GA+R + + E + L L + GS ++ +I + + LA Sbjct: 147 WSILGAARGLVAIISYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFV 206 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A FIE + P L E + E+ G +EYSG +G+ G + + +F+ Sbjct: 207 LFIIALFIETNRTPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYASMIAGAILVTLLFL 266 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 F ++ ++ IVK + +LR D ++ + + Sbjct: 267 GG-----FNGFWIIPGWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVV 321 Query: 301 FVSLLA 306 + + A Sbjct: 322 NLLITA 327 >UniRef50_P08774 NADH-ubiquinone oxidoreductase chain 1 n=192 Tax=Eukaryota RepID=NU1M_NEUCR Length = 371 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 122/349 (34%), Gaps = 46/349 (13%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 +S+L L+ + ++ R A + R GP G+LQ + D +KLL ++ Sbjct: 8 ISILEVLLVLVPSLLAVAYVTVAERKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEY 67 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V A+ +F L P + + L +P ++ +L + ++A + + Sbjct: 68 VALTQANMTLFFLGPVITLIFSLLGYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILL 127 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S + +G+ R A + E +L + + + GS N+ +T + + Sbjct: 128 AGWSANSKYAFLGSLRSAAQLISYELVLSSAILLVIMLTGSFNLG--VNTESQRAVLFVL 185 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ + E + PFDLAEAE EL G ++E++ F +++ Sbjct: 186 PLLPIFIIFFIGSIAETNRAPFDLAEAESELVSGFMTEHAAVVFVFFFLAEYGSIVLMCI 245 Query: 234 MFVGVFIPWGQMETF-------------------------------------TAGGLLLA 256 + +F+ + L Sbjct: 246 LTSILFLGGYLFINLKDVFNILDFVYSNLFIFEINWMVSERSYTEDFFNNYKSILEGWLY 305 Query: 257 LVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 I +K + + + L S R+R D W A + L+ Sbjct: 306 GWIIGLKSSIMIFIFILGRASFPRIRYDQLMGFCWTVLLPIIFALIILV 354 >UniRef50_B5KMD2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bilobella aurantiaca RepID=B5KMD2_9HEXA Length = 308 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 118/309 (38%), Gaps = 22/309 (7%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 L L+ L L + + R + R+GP GVLQ D +KL ++ P Sbjct: 8 LSYLLIILGLLVSVAFIVLVERSVLGYIQLRKGPNKVGMMGVLQSIGDAVKLFSKEQFFP 67 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 +++ W++ L+P M ++L + P ++ S + ++ + + G Sbjct: 68 FNSNAWMYTLSPIFMFVIVLLMWMIAPSMSEYSGM--EVGVVLFFCYSSFVIYGMFGGGW 125 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S + +GA R V E L+L V + G+ ++S+ + LS I + Sbjct: 126 ASNSKYAMLGAMRGVAQAVSYEVSLMLYFLVLVVMMGTLDLSSYMN--LRSTLSVLIMFL 183 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + E + PFD AE E EL G EYS GF ++ + + + + Sbjct: 184 PMVLIWVSLMMAETNRTPFDFAEGESELVSGFNVEYSSGGFALLFLAEYAGIIFMSYLMI 243 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F + L++ + ++ + S RLR D + W + Sbjct: 244 WMFFGGE-----------MHLLVVSMMGILVCFMFIWVRGSFPRLRYDKLMELAWKSYLP 292 Query: 297 AFLAFVSLL 305 L + L+ Sbjct: 293 LSLCYFMLI 301 >UniRef50_Q8WF33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Veneroida RepID=Q8WF33_VENPH Length = 309 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 109/311 (35%), Gaps = 19/311 (6%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + + +LV+ R L R+GP G++Q D +KL ++ + P Sbjct: 1 MSVFLVSLVMLMSVAFFIVTERKGLGMLQLRQGPNKVGLKGLVQFLADGVKLFTKEMIMP 60 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 AS ++ + P + ++ P+ + S L L+ L + + A + + G Sbjct: 61 LFASEGLYTVGPLICFFCAYSLWVLFPM--MFSSLKITLGLLFFLCVSSAAVYGVFMVGW 118 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 S + +GA R V E L L+ + GS ++ P S Sbjct: 119 SCDSRYGFLGAMRAIAQSVSYEVFLSTCLFCPLILTGSYDLIE----SRCSPFSSVFIGF 174 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 L E + PFD E E EL G + E+ G F ++ + + Sbjct: 175 EVLVLWVICILAETNRPPFDFVEGESELVAGYMVEFGGVNFALLALAEYSNMAFMSMLSG 234 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F +F+ LL ++ +V + + + R R D+ + W Sbjct: 235 VLFF------SFSMNLPLLGNLLFSFYMVFFMYFMIWVRGLVPRFRYDLLMELCWKVLLP 288 Query: 297 AFLAFVSLLAA 307 L + ++ Sbjct: 289 LTLCVFMVFSS 299 >UniRef50_Q4L1B9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Lepeophtheirus salmonis RepID=Q4L1B9_9MAXI Length = 295 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 106/294 (36%), Gaps = 24/294 (8%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS-VGPDASGWV 63 + + ++ + R R+GP G+LQ + D IKL ++ + V Sbjct: 4 IPVLVNVAFITLLERKIIGYSQARKGPNKVSFLGILQPFSDAIKLFVKEVGSFSFVNYSV 63 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + ++P V + V L I P+ + LL +++ + +SG + ++ Sbjct: 64 YWISPVVGLSVALLIWNVYPLEMSFGSWSISW--LGLLAGMSVSVYPLFLSGWSSNCVYS 121 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 IG R + E + + ++ ++GS + ++ + P L + Sbjct: 122 HIGGVRGVAQVISYEVVFTILVFSLMSLSGSLTLVGSMLFSEYFYVYMLSP--LLVYLWF 179 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 E + PFD +E E EL G +EY GSGF ++ L+ Sbjct: 180 LTGLAETNRTPFDFSEGESELVSGFNTEYGGSGFALIFMAQYASILL------------- 226 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F+ L + ++ V +G + + R R D + W + Sbjct: 227 LSSLFSLFLLKSSGLLFYVISSLGGFLWVWSRVTYPRHRYDWLMSLCWKSLLPS 280 >UniRef50_B1L371 NADH dehydrogenase subunit H n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L371_KORCO Length = 333 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 117/305 (38%), Gaps = 13/305 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGR 52 + + + F + ++ + R A++ R GP GV+Q D+I+ L + Sbjct: 12 IFIPLVFPGLIAAFVLLLIIIWLERKIAAKVQLRYGPLYVLKPLGGVIQTIADLIRYLFQ 71 Query: 53 QSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFF 111 + V P F LTP + G+ +P+ L+ L L +A F Sbjct: 72 EPVIPKEVDKAAFLLTPVFLFGLAYLPLVMIPISPAYYAFRSDLSLLIALALTTLAPIFT 131 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ 171 I G + + F+ IG+ RE L E + L A + S ++ I + + Sbjct: 132 LIMGWASNNKFSLIGSVREGYLVTSYEIPIFLSALSMAVLYNSLDLVEIAEAQRR--IWG 189 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 +A ++ K PF++ EAE E+ GP +EYSG +G++ +K V+ Sbjct: 190 VFLNPIAAANMLVLIYMSTSKFPFEIPEAESEIVAGPYTEYSGIIYGLVMGASYIKLYVL 249 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 ++ +F+ + ++ + +K + V A R R+D I W Sbjct: 250 SLIYSILFLGGWNPSP--SPDPFISGGVLFLKAFILVAFGAFLRAVYPRFRIDQAVNIGW 307 Query: 292 AGFGF 296 Sbjct: 308 RIAFP 312 >UniRef50_Q0W2B6 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=2 Tax=cellular organisms RepID=Q0W2B6_UNCMA Length = 313 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 166/308 (53%), Gaps = 5/308 (1%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + ++Q+ + A++PL++G+ R +A + +R+G V Q Y D+ KL ++SV + W Sbjct: 6 IALIVLQSAFIVAISPLITGVIRKLKALMQSRKGASVFQPYFDLYKLFRKESVVSSNASW 65 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 VF LTPYV + +L +PV++ S L +GDLI ++Y+ + RFF A+S LDTGS F Sbjct: 66 VFHLTPYVCMAAVLVAVLMVPVISTTS-LSFMGDLIVVVYMLTMMRFFMALSALDTGSAF 124 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALCA 181 +G+SRE + + EP +LL ++ A +AG+T++ +I+ + L P L L A Sbjct: 125 GGMGSSREMTISAIAEPTMLLAIFTMALIAGTTSLGDISYQLSVNGLELIRPSLFLGFAA 184 Query: 182 CAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 T E ++P D E + EG + EYSG +M+ +K + L + V Sbjct: 185 LFIVTLAENARVPVDNPATHLELTMIHEGMILEYSGKQLALMELSSMVKLALFLTILANV 244 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 F+PWG + GL + LV +VK+++ IA E+ MA+LRL P + F A Sbjct: 245 FLPWGIATSLAPAGLAIGLVALLVKILIMAGAIAYIESCMAKLRLFRLPNLLTVSFTLAL 304 Query: 299 LAFVSLLA 306 LA +S Sbjct: 305 LAVMSYYI 312 >UniRef50_A1ASR4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR4_PELPD Length = 303 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 6/299 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ L+ +++ A+APL G+ R AR+ +R+GP + Q Y DI+KLLG+ + + Sbjct: 4 IVGVLVNVILVLALAPLFQGVLRKVTARIQSRQGPPINQPYLDILKLLGKDDIESGEAPV 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + R Y+ + VMLTIA +P+ +PL GD++ L+ L +A ++GL +GS + Sbjct: 64 LQRFAAYLPLAVMLTIACLVPMGFK-APLSGSGDVLLLILLMTLAGICTLLAGLASGSTY 122 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IG +RE M + +EP+ + + + A GS N+ + + ++ L Sbjct: 123 SLIGINREMMCMITLEPLFAVAIVMGALAKGSFNLDEVLSGSVYGANGMALSGFAMLVIM 182 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A +G+ PFD++EAE E+ EG + EYSG + ++ K +V +FV +F+PW Sbjct: 183 LLAFQAFVGRAPFDISEAETEIMEGAMVEYSGPKLALFQYANMAKLVVYSALFVSLFVPW 242 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 G ++ ++ VK+ VL++ + AR R+D R + + Sbjct: 243 GSG-----LAAPISFILFWVKVFAMVLLVTTIAATHARYRIDQAIRYFAIMLAVSLVTL 296 >UniRef50_D2RES9 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Archaea RepID=D2RES9_ARCPR Length = 344 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 13/293 (4%) Query: 21 SGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVGPDASGWVFRL-TPYVM 71 R AR+ R GP G+LQ D ++ L ++ + + V+ L P + Sbjct: 48 IWFERKIAARIQWRVGPKEVSPHIGGLLQVLADALRYLYQEVIVHRDANKVYFLQLPILS 107 Query: 72 VGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREA 131 +L T +P V + L + L+ L A+ F G + F IG RE+ Sbjct: 108 FIPILLALTLVPAGNVYA-LRSEFGIPCLVALIALIPLFVIAIGWSANNRFAYIGLVRES 166 Query: 132 MLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMG 191 + + E L+L + + + + I + + LA AT + G Sbjct: 167 FMYISYEIPLILSVVAMLMLYKTGDAITIVERQS---IPGVFLNPLAFLTFLIATVMASG 223 Query: 192 KLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAG 251 +LPFD+ EA+QE+ GP EYSG FG++ K ++ + V +F + Sbjct: 224 RLPFDIPEADQEIAFGPYVEYSGIMFGLVMVLAYEKLYLLSLLMVILFFGGWRGFEIAVL 283 Query: 252 GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 G L ++ ++K ++ + I + AR R+D RI W +A ++ Sbjct: 284 GDLSDVIWLMLKALIVMCAIVITRAIYARYRIDQALRIGWGFMMALAIASIAF 336 >UniRef50_D2DVZ7 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Unionidae RepID=D2DVZ7_9BIVA Length = 303 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 108/308 (35%), Gaps = 29/308 (9%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-QSVGPD 58 L L L+ + R + A + R+GP G+ Q D +KLL + + Sbjct: 8 LLPTILFSIIAMAFLTLLERKSLALMQLRKGPNKLSLMGLTQPMADALKLLTKANTTTSV 67 Query: 59 ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDT 118 ++ + L P + + + + P S + L+ + + A A + ++G Sbjct: 68 SNTPMVNLIPTGALALSMLMWYLYP--ATHSTTHKTLGLLLFISISATAMYTIILAGWSV 125 Query: 119 GSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLA 178 S + +GA R + E L+L + + ++ + ++S + + + Sbjct: 126 NSKYALLGAMRAMAQAISYEIPLILAMIFYSLLSNTLDLSAFCEKSHLTFKWSL--TMPM 183 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E ++PFD E E EL G EYS F L L + + + Sbjct: 184 TLVWFTVILAETHRMPFDFVEGESELVSGFNVEYSSVKFIAFFMSEYLNILFISLLSSTL 243 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 + + + + + +M R R D+ I W Sbjct: 244 VMGSMYTAP------------------LVIWLFLMARGTMPRHRYDLMMTIMWKSLIPIT 285 Query: 299 LAFVSLLA 306 L+F++L+A Sbjct: 286 LSFITLVA 293 >UniRef50_P48901 NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Saccharomycetales RepID=NU1M_PICCA Length = 351 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 112/322 (34%), Gaps = 33/322 (10%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQS 54 ++++ ++ + + L+ R + R GP + L D +KLL ++ Sbjct: 4 LNIVEMIVLFIFILLSVAYLTVAERKTLGYMQRRVGPNIVGYYGQLMAIADALKLLLKEI 63 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ + ++P + + L +P + L+ +L + +I F + Sbjct: 64 IIVRESDKILIIISPIIALCFALLSWAVIPFSPGIAIGDMNYSLLYILVIGSIGVFGTLL 123 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 G + S FT + + R + E +L + + + + N+++ D + + Sbjct: 124 VGWSSNSKFTLLASIRSTAQLISYELILTTNIIICILLNNTLNLNSFIDNQQT--IWLIL 181 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 PL+ A E + PFD EAE EL G ++E S S F + +++ Sbjct: 182 PLLPIGIIHYIARIAETSRPPFDNVEAESELVSGHMTELSASPFVLFYLQEYNNIVIMCF 241 Query: 234 MFVGVFIPWGQMETFTAGGL------------------------LLALVIAIVKLVVGVL 269 + + +F + ++ K ++ Sbjct: 242 LNIILFFGGYLFWLPFIDNGSNLINFIINYFNINNFNFIYIIEIIFYVINISFKSIILTY 301 Query: 270 VIALFENSMARLRLDITPRITW 291 S RLR D+ + W Sbjct: 302 GFIWVRASFPRLRYDLLVNLCW 323 >UniRef50_B1ZSE4 Hydrogenase, membrane subunit 3-like protein (EchB-like) n=3 Tax=Bacteria RepID=B1ZSE4_OPITP Length = 314 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 4/310 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + ++ + Q +L +APL+SG+ + +A+L NRRGP V Q Y D++K L + V + Sbjct: 3 LELIGLVGQTALLLGLAPLVSGVIKNWKAKLQNRRGPRVWQPYLDLLKFLRKDMVVSEHV 62 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+F +TP V++ L +P++TV +P+ GD + L+ L A+ RF A+SGLD S Sbjct: 63 SWIFGVTPVVLLLTALAAGLLVPMITVQAPMDLFGDALALVGLLALGRFCLALSGLDPAS 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLAL 179 F +G+SRE + + EP ++L ++ A AGSTN+S+I + + P LA Sbjct: 123 TFGGMGSSREMTISAVAEPAMMLAIFAVALTAGSTNLSHIVQASEGFGWNFLDPAHALAF 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E G++P D E + E L EYSG +++W +S+KQLV++ + Sbjct: 183 AAMFVVLLAETGRIPVDNPATHLELTMIHEAMLLEYSGRHLALIEWAVSVKQLVLMALLA 242 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F P G T L L L VKL++ I L E + A+LRL P + F Sbjct: 243 NIFFPLGLAGEATPAALALGLGFFAVKLLLLAGAIVLVEFTNAKLRLFRVPDLLSTAFIL 302 Query: 297 AFLAFVSLLA 306 A LA VS Sbjct: 303 ATLALVSSFL 312 >UniRef50_D1JHT1 F420H2:quinone oxidoreductase, subunit H n=1 Tax=uncultured archaeon RepID=D1JHT1_9ARCH Length = 387 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 121/313 (38%), Gaps = 13/313 (4%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQS 54 VL + L + LL I R R+ R GP G++Q D ++ L ++ Sbjct: 63 VLILMPGFATLGILLLLLPWIERKMVGRMQWRVGPREISPRTRGIIQLLADSLRFLFQEV 122 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQ---LGDLITLLYLFAIARFF 110 + A F P++ +L + GSPL L ++ L + F Sbjct: 123 IIHKDAHKRYFLQFPFLYFIPVLLPLLFINAGAAGSPLVPIVSDYGLQLMVALICLMPVF 182 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 G + + F IG REA L E ++ ++ + G++ + D Sbjct: 183 ILGLGWASNNRFAFIGTIREAFLYFAYEIPFIVAVFAMVVMYGTSGSVGVVDAQAG-GWW 241 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 I +A A + +LPFD+ EA+QE+ GP E+SG FG+ K V Sbjct: 242 GIIQNPIAAITFFIAALMATARLPFDIPEADQEVSFGPFVEFSGIAFGLAYVMGYEKMYV 301 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + + +F+ G G + L+ ++K ++ ++V+ R RLD +I Sbjct: 302 LSALMTMLFLGGGSGPVIPGLGEISYLIWFVLKTLIVMIVMVNLRGVYPRYRLDQGMKIG 361 Query: 291 WAGFGFAFLAFVS 303 W L V+ Sbjct: 362 WNAMLILALVAVA 374 >UniRef50_C9RJK2 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK2_FIBSS Length = 451 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 113/308 (36%), Gaps = 37/308 (12%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP----------------GVLQEYRDII 47 + V LL + R + +R+GP G +Q D Sbjct: 16 IAKFAFCFVPVLYILLLIPMERRGAGFMQDRQGPNRSYIKIPYFGKIRLLGYVQNMCDGT 75 Query: 48 KLLGRQSVGPD-ASGWVFRLTPYVMVGVMLTIATALPVVT-------------VGSPLPQ 93 KL ++ P + ++ + P + ++ +P GS + Sbjct: 76 KLFFKEMFAPAGVNKLLYYVAPAIPFAIVFLSPCVIPWFGPMIFDWGGETVRIAGSIIDS 135 Query: 94 LGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAG 153 ++ L +I+ + ++G + S ++ +GA R + + + E L L L +AG Sbjct: 136 DVGVLLLFGFSSISAYGAMLAGWASKSKYSFLGALRTSSMTISYEVCLGLSLMGILLLAG 195 Query: 154 STNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYS 213 S N+++I H + + +A A+ E G+ PFD+AE E EL G +EY Sbjct: 196 SFNLTDIVQWQEHH-VWGIVAQPVAFFCFLIASIAETGRAPFDVAEGEPELVAGYHTEYG 254 Query: 214 GSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA------GGLLLALVIAIVKLVVG 267 FG+ G + + +F+ + T G LA++ ++ + Sbjct: 255 AMQFGLFYMGEYSHICINSFLIATLFLGGYAVPFVTTETMQEHMGGSLAILCGVLAFIAL 314 Query: 268 VLVIALFE 275 + ++ Sbjct: 315 AFLHMIYR 322 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 22/62 (35%) Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 G L+ L++ + K ++ V ++ R R D + W L + + Sbjct: 381 SFATAVGTALIHLLVLVAKSLIFCWVWIWVRWTLPRFRYDHVMHLGWKIILNIALINLVV 440 Query: 305 LA 306 A Sbjct: 441 TA 442 >UniRef50_B8DNI7 Respiratory-chain NADH dehydrogenase subunit 1 n=5 Tax=Desulfovibrio RepID=B8DNI7_DESVM Length = 332 Score = 162 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 97/312 (31%), Positives = 141/312 (45%), Gaps = 17/312 (5%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGWVF 64 L AV L G+ R ARL R GP ++Q Y DI KL +++V P A+ F Sbjct: 24 VFPGGLFALAVGLFLKGLDRRIEARLQRRVGPPLIQPYLDIAKLFTKETVMPASANRAAF 83 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 L P + + M A LPV V LP +GDL+ + YL + + G + SPF A Sbjct: 84 LLAPLLGLTGMAVCAALLPVPGVSGGLPAMGDLLVIFYLLPLPAIALMVGGSASSSPFGA 143 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGS-------TNISNITDTV-YHWPLSQSIPLV 176 +G SRE L E LL + A G +++NI D + L+ ++ Sbjct: 144 MGFSREMTLMFAYEMPLLAVMLAVAMKVGMATGGGAEFSLANIVDYQLANGQLALDPVMI 203 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 AL A MG +PFD+ EAE E+ EGPL EYSG +LK +VVL + V Sbjct: 204 PALLAYLLFLPGTMGTVPFDVPEAETEIIEGPLLEYSGPALAFFHIASALKTVVVLGLGV 263 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIA-LFENSMARLRLDITPRITWAGFG 295 +F+P GG++ + ++K + V L +++ R R+D Sbjct: 264 ALFLPG-----TVPGGIVANIPWFVLKCAALMAVSLTLVKSATGRFRVDQAFTFYLKY-- 316 Query: 296 FAFLAFVSLLAA 307 + LA SL+ A Sbjct: 317 PSVLALASLVLA 328 >UniRef50_C9V3N4 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Lucinidae RepID=C9V3N4_9BIVA Length = 312 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 113/308 (36%), Gaps = 23/308 (7%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + ++ L++ + + R R GP GV Q D +KL ++ + P Sbjct: 15 VSIIVTFLLVMGGVAFFTLLERKFLGYFQLRLGPNKVGYKGVPQPIADAMKLFLKEFLLP 74 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 D ++ + F P +M+ + + + PV S + L + + + + + G Sbjct: 75 DGSNKFAFVAGPALMLILCVGVWALYPVY--FSSIYFLWGFLLFICISSAGVYGVIAVGW 132 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S ++ +G R + E ++++ + V S ++ + + Sbjct: 133 SSNSKYSYLGCVRAVAQFISYEVVMVMIVLVTMISVESFDMISFCTS----GCWGVFVYA 188 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + E + PFD E + EL G EY G GF ++ L + + Sbjct: 189 PMFFMWLVSLLAETNRAPFDFVEGQSELVSGFNVEYGGVGFALIFIAEYSMILFMSMLTG 248 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 ++ + + ++++ V +++ + L + R R D+ +TW Sbjct: 249 VIYFGG----------MSMGVLMSTVVVLLVSSFVVLCRGGLPRFRYDLLMMLTWKYLLP 298 Query: 297 AFLAFVSL 304 L F+ + Sbjct: 299 VVLVFLGV 306 >UniRef50_Q2RXM3 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM3_RHORT Length = 300 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 154/306 (50%), Gaps = 9/306 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +V + L++ APLL G+ R +AR+H+R+GP +LQ Y D+ KLL ++ + Sbjct: 3 NVGLAIFNVLLVVCAAPLLDGVLRQVKARIHSRQGPPILQTYFDLAKLLVKEDQR-GVNQ 61 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F P V + ++ A +P+ SPL GD I LY+ +A + G+ +GSP Sbjct: 62 LLFAWAPVVCMASVILSALFVPMAG-LSPLGFSGDAIVFLYVLTMAPLCMCLGGMASGSP 120 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + GA+RE M + VEP++ + L + A S N+++ + + ++ +++A A Sbjct: 121 YAYAGANREIMTLMAVEPVVAICLITSGIRAHSLNLADCVNAYAAG--APALSMIIATIA 178 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 E+ K+PFD AEAE E+ EGPL EYSG + KW KQ+V++ +FV F+P Sbjct: 179 FFLILPAELSKVPFDQAEAETEIMEGPLIEYSGRKLALFKWSFYAKQIVLITLFVEWFLP 238 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 W M L + + IV +++ V+ R ++ + R +A F+ Sbjct: 239 WPHMNFVPLDILATLIKVVIVAVIIEVIAQI-----FPRFKIHQSIRYFYAVVAFSVGGL 293 Query: 302 VSLLAA 307 V + Sbjct: 294 VLAVMG 299 >UniRef50_B6D432 NAD(P)H-quinone oxidoreductase subunit 1 n=4 Tax=Embryophyta RepID=B6D432_9MARC Length = 324 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 109/330 (33%), Gaps = 64/330 (19%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + LI + ++ + R A + R GP G++Q D IKL ++S+ Sbjct: 28 LFPLLILVSGVALGVLVIVWLERKISASIQQRIGPEYAGPLGIIQALADGIKLFLKESII 87 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +F + P++++ + + +P+ + + + + +I ++G Sbjct: 88 PSXVDEILFDIGPFLVLVPVFSSYLVIPIGYDIILVNSDIGVFFWISISSIIPLGLLMAG 147 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ +G R A + E L L + A Sbjct: 148 YGSNNKYSFLGGLRAAAQSISYEIPLALSVLSVALR------------------------ 183 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 +LPFDL EAE+EL G +EYSG F L L+ Sbjct: 184 ---------------ERLPFDLPEAEEELIAGYQTEYSGIKFAFFYLSSYLNLLISSLFV 228 Query: 236 VGVFIPWGQMETFTA------------------GGLLLALVIAIVKLVVGVLVIALFENS 277 + ++ +++ + K + + + + Sbjct: 229 TIFYFGGWYFPIPFMSKFDQSGWDPFIVEINQVTDAVMGIIMTLAKAFLFLSISITTRWT 288 Query: 278 MARLRLDITPRITWAGFGFAFLAFVSLLAA 307 + R+R+D + W L + L A+ Sbjct: 289 LPRIRMDQLLNLGWKFLLPIALGNLLLTAS 318 >UniRef50_Q07T25 Respiratory-chain NADH dehydrogenase, subunit 1 n=11 Tax=Bacteria RepID=Q07T25_RHOP5 Length = 319 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 158/292 (54%), Gaps = 4/292 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +L Q L++F +APLL+G R +ARL R+GP +LQ YRD+++LL +++V D + Sbjct: 7 DILVQGFQMLLVFMLAPLLTGFVRKVKARLTRRQGPSLLQPYRDLLRLLRKEAVLADNAS 66 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W+FR TPY+ + A +P G DLI ++ L ARFF A++G+D G+ Sbjct: 67 WLFRTTPYLTFAAIWVAAALVPTFATGLLFNWTADLIVIVALLGTARFFLALAGMDIGTA 126 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F IG+SRE M+ L EP +LL ++ A VAGST +S + + + + + L LA+ A Sbjct: 127 FGGIGSSREVMIAALAEPAMLLIVFGVALVAGSTQLSTVANFIASSQVGLRVSLGLAMIA 186 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E ++P D EL E + EYSG ++++G LK L+ + + + Sbjct: 187 LVMVALAENARIPVDNPSTHLELTMVHEAMILEYSGRHLAMIEFGAFLKLLLYVSLIGCL 246 Query: 239 FIPWGQ-METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 F PWG + ++ + ++K+ V ++ALFE + A++R+ P+ Sbjct: 247 FFPWGIAIAGDAPLSYVVGAGLYLLKVTVAGFLLALFETATAKMRVFRVPQF 298 >UniRef50_B9LUF2 Respiratory-chain NADH dehydrogenase subunit 1 n=6 Tax=Halobacteriaceae RepID=B9LUF2_HALLT Length = 357 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 117/324 (36%), Gaps = 24/324 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLH-----NRRGP-GVLQEYRDIIKLLGRQSVG 56 + L+ ++L R A NR GP G+L ++LL ++ + Sbjct: 31 IGAALVANIILAFSGIAGPWAKRKITAAFTDRIAVNRIGPFGLLIIPAAAVQLLAKELII 90 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSP----LPQLGDLITLLYLFAIARFFF 111 P+ + + P ++ + + +P+ +G L + +IA Sbjct: 91 PEGVDRPTWDIAPILLPASAMLGFSVIPMGQIGPLNIHLADPEVGLALVFAFASIASVSL 150 Query: 112 AISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV------- 164 ++G + + ++ +G R + E L++ AG+ IS + Sbjct: 151 VMAGYASNNKYSLLGGLRAVAQNLAYEIPLIVTAMSVVVFAGTLQISGVVGAQTETLVTI 210 Query: 165 --YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKW 222 + P + A A E+G+ PFD+ EA E+ G +EYS + F + Sbjct: 211 AGFDIPAWFAFVNPFAFVLFLTANMAEIGRNPFDIPEAPTEIVGGYQTEYSSAYFVLFYL 270 Query: 223 GISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLR 282 G + + + VF+ G ++ + +VK+ L ++ R+R Sbjct: 271 GEFVHIFLGGAILSVVFLGGASGP----GPESISFIWFVVKVWGFFLFTQWARAAIPRVR 326 Query: 283 LDITPRITWAGFGFAFLAFVSLLA 306 +D I W G A + L A Sbjct: 327 IDQLIEIGWKGMLVLSFANLVLTA 350 >UniRef50_D1FKC5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ceratosolen solmsi RepID=D1FKC5_9HYME Length = 314 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 116/298 (38%), Gaps = 22/298 (7%) Query: 16 VAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS-VGPDASGWVFRLTP 68 L+ + R + + R+GP G+LQ + D +KL ++ VG + ++ + P Sbjct: 24 SISFLTLLERKLLSYMQLRKGPNKTGFIGLLQPFSDGVKLFTKEFAVGFKVNRLLYYMCP 83 Query: 69 YVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGAS 128 + +M + T+LP + + + + ++ + + + SG + +P +G+ Sbjct: 84 LYGMLLMFSCWTSLPY--TVNFMSHGANGLLIICILSAGVYLLIFSGWFSSTPLGMLGSI 141 Query: 129 REAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFI 188 R + E L+ ++ +AG ++ + +T + L ++ + Sbjct: 142 RSVAQTISYEVSLIFIIYSVLMLAGGFDLFELYETQK--FSWFILTLPISAFMFFVSMLA 199 Query: 189 EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETF 248 E+ + PFDL+E E EL G +EY S F + + + MF F+ Sbjct: 200 ELNRTPFDLSEGESELVSGFNTEYGASIFSLFFLAEYGMIMFMGFMFSLFFLGGKYFCWS 259 Query: 249 TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLA 306 V +V+ ++VI + R+R D + F F + + Sbjct: 260 -----------FYVSVVLIIMVIIWVRGTFPRMRYDHVMTLVCKDFLFLIFGVLVFVC 306 >UniRef50_B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1 n=3 Tax=Aquificales RepID=B2V8R5_SULSY Length = 311 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 86/307 (28%), Positives = 155/307 (50%), Gaps = 4/307 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +++ L+Q ++L A++P + + L ++GP + Q Y+DI +L ++ V + Sbjct: 3 NIVIGLLQFVILVAISPFIKTFIHKIKCILRGQKGPPLTQAYKDIYRLFKKEVVISKDAS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ R+ PYV+ L AT LPV+ + L GD+I L Y+ A+ FF A+ G+D S Sbjct: 63 FISRMAPYVVFVSTLWAATFLPVINKYTLLNFTGDIIALAYILALGVFFIALYGMDQASA 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ-SIPLVLALC 180 F +G+SRE + L E +L ++ A GSTNI I + V+ + +S + + AL Sbjct: 123 FGGLGSSREITIAALSEASFMLIIFTFALQTGSTNIGEIFEKVHQFGISHVPVSVAFALI 182 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + + E ++PFD E EL E + E SG + + +K + L + Sbjct: 183 SLLIVSLAENARIPFDNPETHLELTMVHEAMILEASGRHLALFELSSYIKLTIFLTLASN 242 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F P G + + ++L +V+ I+K+++ + +AL E SMA+ R P I F + Sbjct: 243 LFFPLGFYKDTSILFIILGVVVYILKMLLFAVPVALIEMSMAKFRFFRVPEILTLAFILS 302 Query: 298 FLAFVSL 304 ++ + Sbjct: 303 LISLIIY 309 >UniRef50_A7ZBL0 Hydrogenase-4 component C n=4 Tax=Campylobacter RepID=A7ZBL0_CAMC1 Length = 306 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 163/307 (53%), Gaps = 8/307 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L + Q +V+ VAPL G+ R RA+L +++G Q YRDIIKL R P+ S Sbjct: 3 TILLMIFQVVVIVLVAPLFDGMARKLRAKLQSKQGSDFFQTYRDIIKLFRRGRTVPECSH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVG-SPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 WVFR P+ + + A+P+ + D+ +LYL A+ RF F + +D+G+ Sbjct: 63 WVFRWAPFFLFATSAAVLAAIPITYSKDTVFGAYSDIFVILYLGALLRFVFGAASMDSGN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV-LAL 179 PF A G RE MLGV VEP++++ L V A ++N+ I + V + IP +A Sbjct: 123 PFAATGGGREQMLGVYVEPVMIMCLIVVMLAAKTSNLVEIQEMVRTGVIGYQIPSFAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A + ++E G+ PFDLAEAEQELQEG L EY+GS G+++ + LKQ ++ +F+ +F Sbjct: 183 IAFLWCMYVETGRKPFDLAEAEQELQEGVLGEYAGSDLGLVQASLILKQFAMIGLFLSIF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 PW F LA+++ ++K V + +N R ++ + R G Sbjct: 243 EPWNFSNPF------LAIIVFVIKTGVFYVAAVFIDNFGPRFKMTSSLRKNALGALAISF 296 Query: 300 AFVSLLA 306 ++L Sbjct: 297 VALTLYV 303 >UniRef50_C7DIL4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL4_9EURY Length = 345 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 133/309 (43%), Gaps = 15/309 (4%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +++ +I +++ L R AR H+R GP G+LQ D++KLL ++++ Sbjct: 38 LVFAIIIGVLVTLFVYLFGWGERKLMARAHSRHGPTYVGKFGILQNLADVVKLLAKENII 97 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P A +F+L+ ++ + + I P+ + + LI + + + I G Sbjct: 98 PDKADNPLFKLSLPIVYALFVLIVIFTPLTSTFVGINTSIALIAVFLILSFIPILMFIIG 157 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 +G+ F +IGA R ++ + E LLL + A +A S ++S I + + + Sbjct: 158 WASGNKFGSIGAQRSIVMLISYEIPLLLVIAAIAMLAHSYSLSTIVNDQSS--IWYVALM 215 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + EM + PFDL EA+ EL G L++ S +G+ + + V + Sbjct: 216 PIGFVVFFIVMLAEMERPPFDLREADSELIAGWLTDVSAPYYGLALFLDYTRIFVGTLLI 275 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F G LL ++K+V+ + I + ++ R++++ R W Sbjct: 276 AVLFFGGW------GGPLLPPFAWILIKIVILSIAIVIIRVTVVRMKINRLLRFGWLYLL 329 Query: 296 FAFLAFVSL 304 + + + Sbjct: 330 PLSIINLIV 338 >UniRef50_B9L624 NADH-quinone oxidoreductase chain 8 n=3 Tax=Epsilonproteobacteria RepID=B9L624_NAUPA Length = 323 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 124/317 (39%), Gaps = 20/317 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + + L L A + R A +H R GP G LQ D+ KLL ++S Sbjct: 7 LFYILVFPGLLFLLAWTFFVFYFARKTLAYIHKRVGPHFNGPAGTLQTIFDVFKLLTKES 66 Query: 55 VGPDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGS----PLPQLGDLITLLYLFAIARF 109 + P + ++F + P + V +P + + L ++ L+ L + F Sbjct: 67 ITPKSADPYLFNIIPIITPLVAALPVILIPWTPLINNGHGILDTQYGVLGLVVLIGVEPF 126 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL 169 ++G + + ++ +G R + +E L A + G+ N+ I Sbjct: 127 LLFLTGFGSNNKYSFLGGMRILAQMLSMEAPFFLAALAPALLFGTMNLYEI---QSQNTW 183 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 ++ L+ A + + PF + +AEQE+ G +EY+G+ + ++K+ + L Sbjct: 184 LTTLILLPGAVIFIIAMLGILEQPPFHIPDAEQEIVYGFYTEYAGTNYVLLKFAEFTEML 243 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 VV V +F + F + +K+ + +V+ S RLRLD + Sbjct: 244 VVSAAAVVLFFGGYRGLFFD------SFWWLFLKIALLAVVMVAIRASNPRLRLDQMLKF 297 Query: 290 TWAGFGFAFLAFVSLLA 306 W+ + + + Sbjct: 298 CWSWLTPLAILNLVWII 314 >UniRef50_Q6JCT2 NADH-ubiquinone oxidoreductase chain 1 n=20 Tax=Arthropoda RepID=Q6JCT2_9HEMI Length = 318 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 22/311 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + L ++ + F + + R + + NR+GP G+LQ + D IKL ++ Sbjct: 2 IYFLIMILLLISTFLSIAFFTLMERKILSYMQNRKGPNKTLIMGILQPFSDAIKLFSKEM 61 Query: 55 VG-PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 ++ ++ + P + + L + P + ++ L+ + +I + Sbjct: 62 NLNFKSNYIIYYMFPLLNIICSLMMWMIYPFYWNFNFNKFN--ILMLMSMMSINMIIIML 119 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 + S + IG R + E L++ + + N + + + + Sbjct: 120 ISWSSNSNYAMIGLMRSIAQMISYEINLMIIIMTIVNLTEQLNFNYMFIMQKYM--MFYL 177 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L+ E + PFD +E E EL G EYS F + L++ Sbjct: 178 YLMFLFYIWIITILAETNRTPFDFSEGESELISGFNIEYSSFSFAFIFLAEYSNILIMSL 237 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + + +F + ++ +I ++ + ++ R R D +TW Sbjct: 238 ITLTMFF-----------NMKMSSMIFFFTFMILCFLFIWTRCTLPRFRYDKLMYLTWIK 286 Query: 294 FGFAFLAFVSL 304 F + + Sbjct: 287 FLPLTILYFFF 297 >UniRef50_A8MB61 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB61_CALMQ Length = 361 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 111/309 (35%), Gaps = 9/309 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSV 55 ++ + + LF + R A AR+ R GP GV+Q D+I+ ++ + Sbjct: 41 VWFVPGLIGLFIPLIFVIWWERKAAARVQWRYGPLEISRRIGGVIQPISDLIRYTLQEII 100 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 +A F P L LP + +++ L +I +S Sbjct: 101 IHQEADEAYFLHMPVFGFIFALLPVLFLPAGPHVYAINTGYNILIAAVLISIFNIVIIVS 160 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + + IG REA + E +L + + G+ + + + + +I Sbjct: 161 GWASTDKWAYIGTVREAFMYAAYEVPFMLSVIAMIILFGTADPFAMVNAQVAHYIPGAIL 220 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 +A T + + PF + E + +L GP +EY G FG+ K V+ + Sbjct: 221 NPIAFIVAFITTAMASSRFPFTIVENDTDLVVGPFTEYGGLIFGLTMTMSYEKTYVMTLL 280 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ G L A + V++ + ++ + RLD RI W Sbjct: 281 LSILFLGGWSGPYIGPLGDLSAPLWLGVRVFLVMMFFSFLRAVYPSYRLDQALRIGWRTL 340 Query: 295 GFAFLAFVS 303 + V Sbjct: 341 LILSVVSVI 349 >UniRef50_A1RWL7 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL7_THEPD Length = 312 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 5/310 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSV-GPDA 59 + +L ++Q + L +APL GI R ARL R+GP V+Q YRD++KL + + P+ Sbjct: 4 LQILVGVVQGVCLVLLAPLAYGIQRKIIARLQLRKGPPVIQPYRDLLKLWSKDKLSVPEV 63 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 S W++ TP + + + + IA ++PV L D+ L+Y A+ARF +I+ LDTG Sbjct: 64 SSWIYMATPLLYLAITVVIAMSIPVFVNMGI--PLADIFLLIYSLALARFVLSIASLDTG 121 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS--IPLVL 177 SP A GA RE V++E +L + A GS+++ + + ++ Sbjct: 122 SPLAAAGAWRENAAAVVIEVPMLFAALLPALEGGSSSLYAVVSHTCLRWETFIARPSYIV 181 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A A E G LPFD+AEAEQE+QEG L EYSG +M+ + +K+ V+ +FV Sbjct: 182 AALAFFVCMLAEAGVLPFDVAEAEQEIQEGLLQEYSGRQLALMQLSMMVKRAVLFTLFVD 241 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F+P+G T G+L+ + ++KL+ V + AL AR ++ + F Sbjct: 242 IFLPYGVALTLEPLGILVGVASYLIKLLALVTIAALVIAGNARYKVVELHKNLSLVFVLV 301 Query: 298 FLAFVSLLAA 307 A + L Sbjct: 302 VCATIFYLMG 311 >UniRef50_Q6JT33 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Araneae RepID=Q6JT33_9ARAC Length = 304 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 111/308 (36%), Gaps = 22/308 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L I +++ + + R + R+GP G+ Q + D +KL G++ Sbjct: 1 MLKNFILLIMVLVGVAFFTLMERKVLGYIQCRKGPNKVGVLGIFQPFSDAVKLFGKEFYF 60 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + S ++ V++ + + L + G L ++ + F + G Sbjct: 61 LETSNMIYFYLGPVLMIPLSLLLWILLPYSDGV-LDLKYGILFFFICSGMGIFSLMLVGW 119 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S F+ +G+ R + E + + ++ S + +I L + + Sbjct: 120 GSNSKFSLLGSYRGVAQMISYEVSFMFIILGLLMISNSYLLIDILIYQE--ILWFFLGNL 177 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + L E+ + PFD AE E EL G E+ G GF ++ +++ + Sbjct: 178 ILLTMWLIVCMAELNRTPFDFAEGESELVSGFNVEFMGGGFAIIFMSEYSSIMMISTFSI 237 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F ++ ++ ++ ++++ S R R D + W Sbjct: 238 IMFFGSFELN-------------FMILSLLLMVLVLWVRGSFPRFRYDKLMLLAWKFMLS 284 Query: 297 AFLAFVSL 304 L + + Sbjct: 285 GCLVVLMV 292 >UniRef50_A1RZ51 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ51_THEPD Length = 337 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 120/311 (38%), Gaps = 14/311 (4%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVG 56 L AV ++ R AR+ R GP GVLQ D + + ++ + Sbjct: 20 VIFPGLLTALAVLLIVIWAERKIAARVQMRVGPLYVTRHFGGVLQMLADGTRYMFQEFIV 79 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P+ A + L P + + + + +P +P+ L LL + A + G Sbjct: 80 PETADKVPYMLAPALALTLAIAPFALIPSAPGFAPVKSPYSLPALLAILASTPLSVLLMG 139 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + F+ GA REA + + E L L A + GS ++ I L ++ Sbjct: 140 WSSNNKFSIQGAVREAFMTLAYEVPLFLSALSMAILYGSMDLEEIVGRQ---FLPGALLN 196 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 +A A + G+LPFD+ E EQE+ GP EY+G FG+ LK + ++ Sbjct: 197 PVAAFTFFVAMVMSSGRLPFDIVEGEQEIVAGPYVEYTGIVFGIGMGLAYLKLYALSLLY 256 Query: 236 VGVFIPWGQMETFTAGGLLLAL--VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F+ + + L V K +L + + R RLD R W Sbjct: 257 SLLFLSGWEPLPRALYSVYPGLAGVWLFAKAFTLMLFVVFLRSVYGRYRLDQALRAGWRV 316 Query: 294 FGFAFLAFVSL 304 + + + L Sbjct: 317 YLVLAVVSILL 327 >UniRef50_Q6VEI0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Siphonodentalium lobatum RepID=Q6VEI0_9MOLL Length = 295 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 110/309 (35%), Gaps = 33/309 (10%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + LI A+++ + + R + +R+GP G+LQ D +KLL + Sbjct: 6 YIELLIMAVMVLLTVSFYTIVERKCLSYAQSRKGPNKVVFLGLLQAVADGVKLLSKSMNE 65 Query: 57 PDASGWVFRL-TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P S +V+ P VM+G+ LT LP + S + G ++ +L LF + + SG Sbjct: 66 PFKSNFVYFTGAPMVMLGISLTCWYFLPGLGFKSAV---GPILLVLCLFGVNVYCLIFSG 122 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ IG R V E + S Sbjct: 123 WCSYSSYSMIGCVRAVAQSVSYEVCSFFSYCAQQLLE--------VTFFLGSSTSFFFSF 174 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + F E + PFD AE E EL G EY S F ++ L + + Sbjct: 175 LFIVILWMFVCMAETNRAPFDFAEGESELVSGFNVEYGSSLFTLIFLAEYGFILFLSSLT 234 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V +F P ++ +V LV S+ R R D+ +W Sbjct: 235 VSLFFPHS---------------FYLMWSMVLSLVFIYSRGSLPRFRYDLLMMFSWKIIL 279 Query: 296 FAFLAFVSL 304 + + + Sbjct: 280 PLSIVVLMV 288 >UniRef50_A1RZ42 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ42_THEPD Length = 322 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 125/308 (40%), Gaps = 8/308 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L A+ + R AR+ R GP G+LQ D KLL ++ + P Sbjct: 8 VLVFPGLLFTVAMGFWFEYLERKVTARIQRRVGPLYAGPHGLLQPVYDFFKLLLKEEIVP 67 Query: 58 D-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + FR+ P + V + + LPV + L GD + L A+ +++G Sbjct: 68 GWTDVFTFRVAPILAVTIPVFGMCVLPVASTKGLLSFEGDFALVFLLLALGVLTLSLTGY 127 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 SP+TAIG R + + E + LL L AA A + + I + Sbjct: 128 SVLSPYTAIGVGRLLVQYSMYEGVFLLSLASAALQAKTMSFEGILAYQESHG-FLGLYQP 186 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 ++L A A ++ K PFDL A+QE+ G ++E SG G M+ L + + + V Sbjct: 187 VSLAAALVALLAKLEKRPFDLPHAKQEVVAGWMTELSGRGLAFMRLYEDLSMVWGIALIV 246 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 VF+ + G L +K ++ L + L + +R+R+ + W Sbjct: 247 VVFLGGPLGPGYKELGALAGFAWFALKSLIVALAVILVSATTSRVRVYGLAEVFWKRVYP 306 Query: 297 AFLAFVSL 304 L + + Sbjct: 307 LVLLQLVV 314 >UniRef50_Q06SB9 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Heteroconchia RepID=Q06SB9_9BIVA Length = 314 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 100/298 (33%), Gaps = 20/298 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L+ L L + R R+GP G+ Q D +KL+ + Sbjct: 12 LLFFLSVLLGGLISVAFFIVVERKGLGHFQLRQGPNKPSIKGIAQALADGVKLMLKGCFF 71 Query: 57 P-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P ++ ++F L P++M P S + + + L A+ + I G Sbjct: 72 PGNSEKYLFFLGPFLMFSFSYGFWLIFPCYH--SSIFYESSMAYYMCLVALGVYGVFICG 129 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +GA R + E +L + +G ++++ T Sbjct: 130 WSSNSSYALLGAMRALAQSISYEVVLGTLILCPCLYSGGLSVNSFLMTKG----LYGGLS 185 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 V E + PFD E E EL G E+ G GF ++ L + Sbjct: 186 VEIFFLWMAVLLAETNRAPFDFVEGESELVAGFNVEFGGFGFALIALAEYGSILFSSVLT 245 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 +F + +L+ V+ V V + L + R R D +W G Sbjct: 246 GVLFFG-------SFFEGILSGVLISVWGVFLSYLFILVRATFPRFRYDKLMSFSWKG 296 >UniRef50_B5IS25 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS25_9EURY Length = 329 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 17/322 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGI----TRVARARLHNRRGPGVLQEYRDIIKLLGRQSVG 56 M++LY + + L+ S + R AR+ R GP +LQ + D +KL+ ++S+ Sbjct: 1 MNLLYATLGLIALYIYVSFASLLWEGIDRKLVARMQRRVGPPLLQPFYDFLKLMSKESII 60 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 P + + L P + + V + + P+ GD+I +YL + F + + Sbjct: 61 PKHANKFYELAPVLALAVSIALLAYTPMGFA-PLFATKGDVIVFIYLLTLIGFIRVLGAI 119 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN----ISNITDTVYHWPLSQS 172 +GSP+ IGA RE ++ V E ++L L+ + S T + + Sbjct: 120 SSGSPYAQIGAQREMIILVSREVPMMLALFTILWRLNNIGVEKPFSLATFYQRNIWELGT 179 Query: 173 IPLVLALCACAFATFI----EMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 ++ E+ FD+ EAE E+ EGP++EYSG + + ++K Sbjct: 180 PLALIGTFILLVVFLAWLASEIEVGFFDIPEAETEVAEGPMAEYSGRHLALFELSNAIKM 239 Query: 229 LVVLQMFVGVFIPWGQMETFTAGG---LLLALVIAIVKLVVGVLVIA-LFENSMARLRLD 284 V + V +F PWG G L++ ++ +K+ + V +F RLR+ Sbjct: 240 FVSASLVVAIFFPWGISAYVGLNGIPALVVDVLFHTIKVFAVLFVSMSIFRAITGRLRIT 299 Query: 285 ITPRITWAGFGFAFLAFVSLLA 306 ++ W A + +LA Sbjct: 300 QAVQVFWLRLFPAAIIGSLILA 321 >UniRef50_Q5W905 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Lingula anatina RepID=Q5W905_LINUN Length = 318 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 105/311 (33%), Gaps = 16/311 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQSV- 55 LY + L + S R + + R+ PG+ LQ D +KL + + Sbjct: 14 YLYMFSFQVNLLVIIAFYSLSERAILSLVAGRQSPGIVGLRGVLQPMADGMKLYMKDMIR 73 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 ++ + L P V +G+ + P S + L +++ I+G Sbjct: 74 LAQSNHLAYVLCPSVSLGLSFAAWSVFPFWGTYSL---EVSALLFLCFISLSAIPIMIAG 130 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ + + R + E +L L L S +S++ + ++ Sbjct: 131 WASNSKYSLMASVRSLAQAISYEVVLGLLLVFPLLFTHSLEMSSVAAPTQS--IWVALAF 188 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 E + PFDL EAE EL G EYSG F + L+ + Sbjct: 189 PPLFGMWLACILAETNRSPFDLVEAESELVSGYNVEYSGLHFALFFMSEYSNMLLFSVVT 248 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +++ G F L + K + I R+R D ++ W G Sbjct: 249 TSLYLNDG----FLFTNPALQEAYFMTKAFFVSIFILFCRAVFPRIRFDQLMKMMWLGSL 304 Query: 296 FAFLAFVSLLA 306 L+F Sbjct: 305 PLTLSFYIWYI 315 >UniRef50_Q2RUH3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Bacteria RepID=Q2RUH3_RHORT Length = 323 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 17/316 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + + + L G R ARL R G +LQ + D++KL+ ++++ P+ + Sbjct: 12 LFAAVVFPGGIFAITLGLALKGFDRRVFARLQRRVGAPLLQPFYDVLKLMTKRTLVPENA 71 Query: 61 GWV-FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 V F + P + + M A +P+ + P P GDL+ L YL ++ ++G +G Sbjct: 72 NLVVFLMVPLLGLASMGVAAAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGSASG 131 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAG-------STNISNITDTVYHWPLSQS 172 SPF IG SRE + + E +LL + A G ++S I Sbjct: 132 SPFGGIGFSREMAIMLAYEGPILLVIVSVALKTGAALGQPICLSLSEIVRYQQAHGAYLF 191 Query: 173 -IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 + A+ +G PFD+ EAE E+ EGPL EYSG G++K ++K +VV Sbjct: 192 DPWMWPAVLTYIAFIPANLGISPFDIPEAESEVLEGPLIEYSGVALGLLKLTSAVKSVVV 251 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLV-IALFENSMARLRLDITPRIT 290 + + + +F P G F LV+ +K +V + +++ ++ R+R+D Sbjct: 252 IGLGIVLFFPNGPEGLF-------GLVVFALKCLVITVCGVSVLRAAVGRMRIDQAVIFY 304 Query: 291 WAGFGFAFLAFVSLLA 306 +A ++L+A Sbjct: 305 LKWPELLGIASLALVA 320 >UniRef50_C1INF9 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sinergasilus polycolpus RepID=C1INF9_9MAXI Length = 307 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 101/298 (33%), Gaps = 22/298 (7%) Query: 12 VLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV-GPDASGWVF 64 + ++ + R R GP G LQ + D +KLL ++ +++ +F Sbjct: 16 PVLVNVAFITLLERKILGYSQLRLGPNKVSLIGFLQPFADALKLLTKEYFTLFNSNILLF 75 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 L+P + ++L + P+ + + + LL + + + + +SG + S + Sbjct: 76 YLSPALSFVIILMLWFMFPMG--LASMSFKYSFLLLLMIMSFSVYPILLSGWSSNSKYAM 133 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G R + E L + S N+ + S L L Sbjct: 134 LGGMRSVAQTISYEISFAFILMFLMIMNMSVNLE--LKMSSYLFSSVIFTFPLILVMWLV 191 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 E + PFD AE E EL G EY GF ++ + + V V Sbjct: 192 VCLAESNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYASIYFLSALSVLVLF---- 247 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 L + V+ + V ++ R R D+ + W A L + Sbjct: 248 -------KLNSSSVLMWLVTTFFVFFWVWARTTLPRFRYDLLMSLAWKSILPASLLLL 298 >UniRef50_A3MXU6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Thermoproteaceae RepID=A3MXU6_PYRCJ Length = 324 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 107/296 (36%), Gaps = 16/296 (5%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVG 56 + + R AR+ R GP G LQ D+IKL+ + V Sbjct: 13 LIFPGIAGILGFLVVAIWAERKLVARVQWRYGPLYVSKPLGGFLQPIADLIKLVFSELVL 72 Query: 57 PD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P + +F LTP ++ + V L + + + F Sbjct: 73 PRHTNRHLFALTPLLLFVAEAVPVVFIAVAPGLVIFHHSYGLALAVVTWLLIPVFLVGMA 132 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 FT IGA RE +L E LLL + + G+ + + + L + Sbjct: 133 WAEADKFTYIGAVREILLTAAYEVPLLLSVLAMFILYGTADPYAVVERQS---LWGVLLN 189 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 LA A + + + PF++ EAE E+ GP +EY + F + +K + + Sbjct: 190 PLAFLAFYISLAMSTTRFPFEIPEAEPEVVLGPYTEYGSTLFILSFGANYVKMYAGVLLG 249 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 +F+ G LLL + +VK + + + L R R+D R+ W Sbjct: 250 AVLFLGGWSP----FGDLLLGALAVVVKAALLTVPLLLLRAIYPRYRIDQALRLGW 301 >UniRef50_O99824 NADH-ubiquinone oxidoreductase chain 1 n=14 Tax=Arthropoda RepID=NU1M_RHISA Length = 313 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 119/311 (38%), Gaps = 25/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 ++ +Y I L++ + + R H R+GP G+LQ D +KL ++ Sbjct: 3 LNFIYYFILILMVLLSIAFFTLMERKFLGYCHIRKGPNKTGAMGLLQPISDALKLFSKEM 62 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ ++P +M+ +M+ + + L +I L + ++A + Sbjct: 63 NKMFYMNKFIQIISPLIMILMMMMMWMI--FYFSNNALNLNMSIIFFLCISSLASYAILF 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG + S ++ IG+ R + E + + L A + S N + +PL Sbjct: 121 SGWSSNSKYSLIGSYRGFAQVISYEVSMAMILISLAIIPQSYNFISFLKIQETFPLIF-- 178 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + E+ ++PFDLAE E EL G EY F ++ +++ Sbjct: 179 SFLPIFIIWIITVLAELNRVPFDLAEGESELVSGFNIEYGSWLFAIIFMSEYGDIMMISF 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ + + +++ + +I + + R+R D + W Sbjct: 239 LTYYLFLGLKN--------------LILFFVLILMTMIIMIRGTYVRMRYDQLMMMAWKM 284 Query: 294 FGFAFLAFVSL 304 + F+ L Sbjct: 285 ILPQSIIFLFL 295 >UniRef50_B5U6L1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Damon diadema RepID=B5U6L1_9ARAC Length = 303 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 113/309 (36%), Gaps = 30/309 (9%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGV------LQEYRDIIKLLGRQSV- 55 ++ + + + L+ R + RRGPGV LQ + D + L+ V Sbjct: 7 LVEGFLLIVCVLIGVAFLTLFERKVLGYVQCRRGPGVVGAGGFLQPFADAVSLMISGYVG 66 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 +++ ++F L P + + + + P + +I L ++ + ++G Sbjct: 67 VGNSNYFMFMLVPICGLFLAVVMWLVAPFKFGF--IDFSYGIIFFLVCSSLGVYIIMLAG 124 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + +G+ R + E + L L + + S +Y + L + Sbjct: 125 WVSNSKYGLLGSYRAVAQTISYEVSMALILLLVVMLGEGYMFS-----LYEFILWPIVGW 179 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + E+ + PFD AE E EL G E+SG F ++ L++ + Sbjct: 180 GFLVFMWVVTCVAELNRTPFDFAEGESELVSGFNVEFSGGEFALIFIAEYSNILLLSAVS 239 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V VF+ Q + K+++ ++V+ + R R D + W G Sbjct: 240 VWVFMGENQ----------------VFKVMMMMMVVVWLRGVLVRYRYDKIMMLVWKGLL 283 Query: 296 FAFLAFVSL 304 + + Sbjct: 284 PVVMGILVY 292 >UniRef50_B6YWP7 Respiratory-chain NADH dehydrogenase, subunit 1 n=3 Tax=Thermococcus RepID=B6YWP7_THEON Length = 293 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 17/308 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DA 59 M+ +Y + + + APLL GI R +ARL +R+GP ++Q + D++KL R +V P ++ Sbjct: 1 MNAVYAALNLIFIVLFAPLLDGIERKVKARLQSRQGPPLIQTWLDLLKLFRRPNVRPRES 60 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 W+F P + + +L + +P + GS L GD+I +YL ++ A+ TG Sbjct: 61 VRWLFEPAPAIALVSVLAASLFIPSLLPGS-LDTWGDIIAFIYLSTLSAVAIALGAFSTG 119 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLAL 179 SP+ IG+ RE + + E L + A +G + S + +PL + + Sbjct: 120 SPYAQIGSHREVSIIMAEEFSLAFIVAALAASSGGLSFSRL------FPLQLKVSTITGA 173 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A A ++ ++PFD+AEAE E+ EGP E+SG G G++K I +K+L++ + + F Sbjct: 174 LAFAVMAYVAGARIPFDVAEAEPEIVEGPFIEFSGKGLGMLKLSIYVKRLLLTTILLNFF 233 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +P + +++ ++ LV+ +V A E R R R L Sbjct: 234 LP---------QDGTVRVLVYVIGLVIISVVYASIEAHYGRFRTKDAARFLKRFAIVGIL 284 Query: 300 AFVSLLAA 307 +++ + Sbjct: 285 SWILGVVG 292 >UniRef50_Q9YC30 NuoH homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC30_AERPE Length = 375 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 18/305 (5%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQSVG 56 ++ +A + R A AR+ R GP G+L D+++ + +Q + Sbjct: 19 LLILGFGGALLIAIVAVWFERKAAARVQRRIGPYWASPRLGGLLHLVADMMRYMFQQVII 78 Query: 57 PDA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQ-----LGDLITLLYLFAIARFF 110 P + F + P V + V + +P+ S P L+ L + + F Sbjct: 79 PRTVDYFPFLVAPIVGMAVSILPFAVVPLTANPSYWPLPPGLMEYSLLLALAISTLPPIF 138 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 ++G +PFT +G REA + + E + +L L A GS NI I + Sbjct: 139 LIVAGWAANNPFTIVGGVREAFIILAYELIAILSLLAPAITVGSFNIVEIVQAQ-GFFKW 197 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 I LA A A + PF++ E+E E+ GP +EYSG + + G +++ Sbjct: 198 FIILNPLAFLAAVIAIAMSTSAFPFEIPESEPEVVAGPFTEYSGILYALNMGGAYMRRFA 257 Query: 231 VLQMFVGVFIPWGQMETFTAG---GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 + V + G G LL ++ + K + L I+ R RLD Sbjct: 258 FSLIASLVLLGGWYPVVPGEGVVMGYLLPSLVVVAKAALVTLAISFLRAVYGRYRLDQAL 317 Query: 288 RITWA 292 + W Sbjct: 318 DLAWR 322 >UniRef50_Q1W1M9 NADH-ubiquinone oxidoreductase chain 1 n=795 Tax=Araneae RepID=Q1W1M9_9ARAC Length = 306 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 115/305 (37%), Gaps = 20/305 (6%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + + ++ +L + + + R + + R+GP G+LQ + D IKL + Sbjct: 2 IMFINFIMISLSILISVAFYTLLERKILSYIQIRKGPNKVGMMGILQPFSDAIKLFNKNL 61 Query: 55 VGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 + ++ + M + ++ + + + L+ L +++ +F + Sbjct: 62 LPLESMNFTLSFMTPFMSLFISLCMISIMMFNHSTLIDIKHSLLMFFILSSMSVYFILLI 121 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G T S + +G+ R + E + + ++ S + + + +T + L Sbjct: 122 GWSTNSKYCHLGSIRSVAQMISYEVPFFMVILFLVLLSQSYSFTQMEETQ--YLLYYFWG 179 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 +L + E + PFD AE E EL G EY G F ++ L L++ + Sbjct: 180 NMLLFMMWLSSCLAETNRSPFDFAEGESELVSGFNVEYMGGLFALIFLSEYLSMLILSMI 239 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F + + +++ +++ + + + R R D+ ++W F Sbjct: 240 STMMFF------------SPIKSINSMIIMIMITISLIWVRGTYPRFRYDMLMLMSWKMF 287 Query: 295 GFAFL 299 + Sbjct: 288 LPLSM 292 >UniRef50_D2LQH3 Respiratory-chain NADH dehydrogenase subunit 1 (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQH3_9EURY Length = 280 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 10/270 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-AS 60 + + L L GI R A + R GP + Q + D+ KL ++++ PD A Sbjct: 11 YIAATFLIILFAIPFGLLTKGIDRKLAAHMQWRVGPPIWQPFWDVKKLFQKETIVPDDAI 70 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W++ P + + + I +P+ L GD+I +LYL I G + S Sbjct: 71 SWLYNAAPILCLASTVIILLYIPLGPFSPVLNGHGDVILILYLLTIPSLAMVAGGFASSS 130 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW---------PLSQ 171 PF ++GA RE +L + E L + A S ++ + Sbjct: 131 PFASVGAQREMVLMMSYEFPLAATVIALAWKISSLFPHEAVFSLTAFVKHPVWNIMGPFG 190 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 + V+ L T E+ K+PFD+AEAE E+ EG EYSG G+ ++K +V+ Sbjct: 191 IVGAVILLIVLLLVTTGEITKVPFDIAEAETEIAEGVFVEYSGRNLGLFYLADAVKTVVM 250 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAI 261 + V +F P+ + AI Sbjct: 251 SALIVAIFFPYNLSPLLMPYISMPCWGWAI 280 >UniRef50_C8BPE3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Phrynosoma blainvillii RepID=C8BPE3_9SAUR Length = 322 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 7/197 (3%) Query: 105 AIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTV 164 + A + SG + S + IGA R + E L + L + G ++ + T Sbjct: 115 STAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLAVVILTGGFSLKTMLMTQ 174 Query: 165 YHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGI 224 + +T E + PFDL E E EL G EY+G F + Sbjct: 175 EQT--WLLYSSWPLMMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAE 232 Query: 225 SLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLD 284 +++ + +F+ GQ L ++K ++ + S R R D Sbjct: 233 YANIMMMNTLSCILFLSPGQTTQPEMFSTNL-----MLKTMLLTIGFLWIRASYPRFRYD 287 Query: 285 ITPRITWAGFGFAFLAF 301 + W F LA Sbjct: 288 QLMHLLWKQFLPMTLAL 304 >UniRef50_D1B458 Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B458_SULD5 Length = 308 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 9/310 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M Y L+Q L+ VAPL G++R RA+ +R GP + Q Y DI KLL R + Sbjct: 1 MDFFYLLMQLLLAIIVAPLFDGMSRKLRAKFQSRIGPNIFQTYYDIYKLLKRGRTQSHSV 60 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTV---GSPLPQLGDLITLLYLFAIARFFFAISGLD 117 ++ R+ PY+M + LP+ S L D+ LLYL A+ RF F ++G+D Sbjct: 61 SYISRIAPYMMFISAAAMFCVLPITYGRDATSSLMPFSDIFILLYLAALFRFTFIVAGID 120 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV- 176 + +PF+ + ASRE +G E + ++ L V AGSTN+++I + + +IP Sbjct: 121 SANPFSGVSASREGTMGFYTEEVAVICLIVVMMGAGSTNLASIVNMIQSGVYGYNIPSFS 180 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 +A A + ++E G+ P+DLAEAEQELQEG L E+ G F ++ I LKQ+ VL F+ Sbjct: 181 IAATAFLWVMYVETGRKPYDLAEAEQELQEGVLGEFCGKDFAIIDMAILLKQMSVLGFFI 240 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F+PWG + +L+L+I + ++ ++ +N R ++ + T Sbjct: 241 VIFMPWGLV-----NHPILSLLIFLAQVGFLYIMGVFIDNFGPRFTINKGVKRTMLYALA 295 Query: 297 AFLAFVSLLA 306 ++L Sbjct: 296 VSCTSLALYI 305 >UniRef50_Q8HQJ2 NADH-ubiquinone oxidoreductase chain 1 n=5 Tax=Arthropoda RepID=Q8HQJ2_ORNMO Length = 324 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 109/309 (35%), Gaps = 23/309 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 +L I L++ + + R +H R+GP G+ Q + D +KL ++ Sbjct: 2 LLCDFILLLMVLVSVAFFTLLERKVLGYIHLRKGPNSVGIIGMFQPFADAVKLFCKEMNF 61 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 ++ ++ ++L + + + + LI L + ++ + G Sbjct: 62 MKFMN-IYMYMWISVISLILMMMGWILYYWGKNQVEIEYGLIYFLCVSSLGVYVILGGGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + S + +G+ R + E + L +GS NI +++ + + Sbjct: 121 ASNSKYGLLGSFRGLAQVISYEVGMSFVLMGIIYFSGSYNIMVVSEFQEKF--WMVWGMT 178 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 ++F E+ + PFDL E E EL G EY GF ++ + + + Sbjct: 179 GLFFLWMISSFAEVNRSPFDLCEGESELVSGFNVEYGSYGFALLFISEYGNIIFMSMLSC 238 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F L + L++ + + L ++ R R D + W Sbjct: 239 IMFFGG--------------LGYMSLLLLMFMYLYLLIRGTLVRFRYDFLMMVAWKVVLP 284 Query: 297 AFLAFVSLL 305 + F + Sbjct: 285 CSMFFYYIF 293 >UniRef50_Q9ZY22 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Eukaryota RepID=Q9ZY22_PEDMN Length = 310 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 115/311 (36%), Gaps = 26/311 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV- 55 L LI + + L I R A + RRGP G LQ D +KL+ + ++ Sbjct: 12 FLKGLILLVSVLLSVAFLVLIERKVIAYIQRRRGPVFVGFWGALQSIADGLKLILKTNLS 71 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 ++ +P++ + L +P+ + L +L L +I + ++G Sbjct: 72 VFGIEKSIYYASPFISFFISLLSWVFIPLGFLLQ--DSDISLFFILALNSIGVYGILLAG 129 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 L + S + +G R A + E L + ++ G +I + + + PL Sbjct: 130 LSSSSRWAFLGGLRSAAQIISYELSLNICIFSIILCVGGLSIIKVVSFQEN--ILLVFPL 187 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + + E+ + PFDL EAE EL G +Y F G +++ + Sbjct: 188 LPFILISFIISLAEINRAPFDLPEAEAELVAGYNVDYGAINFTFFFLGEYTHIVLISFIM 247 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F + I+ + + +I ++ R R D ++ W Sbjct: 248 AKLFFG---------------SLNTILIPIFFIFLIIQVRAALPRYRYDQLMKLGWKELL 292 Query: 296 FAFLAFVSLLA 306 + + +L+ Sbjct: 293 LISFSCMFILS 303 >UniRef50_A0RMA8 Hydrogenase-4 component C n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA8_CAMFF Length = 306 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 99/307 (32%), Positives = 171/307 (55%), Gaps = 8/307 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +VL ++Q V A+ PL GI R R ++ +R+G +LQ Y DI KLL R P+ Sbjct: 3 AVLLMILQLFVALALTPLFDGIARNLRGKIQSRKGSPILQTYYDIFKLLKRSRTAPNCVH 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLG-DLITLLYLFAIARFFFAISGLDTGS 120 W F+ +PY++ V + +P+ GS D+I ++YL A+ RF F ++ LD+ + Sbjct: 63 WFFKFSPYMLFSVCAMLVMMIPITYGGSANAGAVSDIIVVVYLVALFRFIFGVASLDSAN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQ-SIPLVLAL 179 P+ A+GASRE+++ + +EP++++ L V A +A +TN++ I + + + + S +A Sbjct: 123 PYAAVGASRESLIAIYIEPIMIICLVVIAMLAKTTNLAIIKELIQNAEIGYSSASYAVAS 182 Query: 180 CACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 A +A ++E G+ PFDLAEAEQE+QEG + EYSG +++ + LKQ ++ F+ +F Sbjct: 183 VAFLWAMYVETGRKPFDLAEAEQEVQEGVIGEYSGKDLALVEMALMLKQFAMISFFIVMF 242 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 +P G F L L++ ++ + + + L +N R R+ + + A F L Sbjct: 243 VPIGFSSPF------LTLIVHLILVGLFYVGAILIDNFGPRFRIISSLKFNSACILFISL 296 Query: 300 AFVSLLA 306 +SL Sbjct: 297 ISLSLYV 303 >UniRef50_B1GYJ7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Brachionus plicatilis RepID=B1GYJ7_BRAPC Length = 299 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 114/313 (36%), Gaps = 25/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M +L L+ L+L + R HNR GP G+LQ D KLL +QS Sbjct: 1 MLILCWLLHCLLLLLSVAFFTLFERKVMGLFHNRLGPNKVSFIGLLQPLLDAFKLLSKQS 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P A+ + + ++P++ + + L I +P + + L+ +I F + Sbjct: 61 LTPLRANKFTYHISPHLALVLSLFIWLTMPTLYMMV--NMNYSLVMFFCAGSIMVFSVLL 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S ++ IG+ R + E + + + + S ++ S Sbjct: 119 AGWSSNSKYSLIGSLRSVAQSISYESVFSTLIVLVLILIMSY-------SIRSSFSLSSA 171 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L+ L T E + PFD +E+E EL G +EYSG+ F + L Sbjct: 172 LLIPVLPLWLICTLAETHRAPFDFSESESELVSGFNTEYSGAYFAFIFLSEYTVLLYSCM 231 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F W T + I+ + + + R R D+ +W Sbjct: 232 LITLLFFSWLIPHT---------IFFVIIGTLFMSFIFIWIRITFCRFRYDMLMMTSWKV 282 Query: 294 FGFAFLAFVSLLA 306 L Sbjct: 283 LLPVTLMLFVCYV 295 >UniRef50_P48897 NADH-ubiquinone oxidoreductase chain 1 n=38 Tax=Pulmonata RepID=NU1M_ALBCO Length = 299 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 112/311 (36%), Gaps = 26/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M V L+ L + + + R + + R+GP G++Q D +KL ++ Sbjct: 1 MVVFKSLLLNLCILLSVAFYTLLERKVLSSMQIRKGPNKVGLYGIIQPIADALKLFLKEF 60 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 P +++ ++F + P + + + L + P + + + L+ + L + Sbjct: 61 FIPVNSNSFMFMILPLLGLTLSLMLWAVFPSMWMFNF--HSYLLMLFVALTGTFVYVIIF 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + S ++ +G R A + E +LL L+ A + + + I Sbjct: 119 AGWSSNSKYSFLGGMRAAAQTISYEVSMLLLLFFAVLMYRTYSWYE-----AGLSSPIGI 173 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + + + + E + PFD AE E EL G EY G F ++ L + Sbjct: 174 IIFIIMFIWFASCLAETNRAPFDFAEGESELVSGFNIEYYGGMFALLFLAEYSSILFMCM 233 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 M F+ + I + +++ + R R D+ + W Sbjct: 234 MSTVWFL------------YSDMIFIMTLLILLIAMAFLFARGVYPRHRYDLLMNLCWKS 281 Query: 294 FGFAFLAFVSL 304 F L + Sbjct: 282 FLPFSLCCICY 292 >UniRef50_B5IS39 NADH dehydrogenase superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IS39_9EURY Length = 322 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 9/313 (2%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DAS 60 ++ Y + ++ + GI R AR+ +R GP + Q + D+ KLL +++V P +A Sbjct: 5 TLFYAVAFPVLGVFLGLTYKGIDRRISARMTSRIGPPIRQPFWDVGKLLLKETVVPENAV 64 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+F P + +T+ +P + +PL GDLI +LYL + A+ G +GS Sbjct: 65 KWLFNAMPILAFASSMTLLLYIPFGILKAPLEGYGDLIVILYLLTLQSLAMAVGGFSSGS 124 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL--VLA 178 PF+++GA RE +L + E L + + A + S +++ I T +S L VL Sbjct: 125 PFSSVGAQREMVLMMSYEMPLAIVIIGFALLYKSFSLTTIASTPVWTMVSPVAALGVVLL 184 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 A T E+ KLPFD+AEAE E+ EG L+EYSG + +++ + + + Sbjct: 185 FIALLVVTPAELAKLPFDIAEAETEIAEGMLAEYSGRNLALFYLSDAVRGFAMAAIEAVL 244 Query: 239 FIPWGQMETFTA-----GGLLLALVIAIVKLVVGVLVIA-LFENSMARLRLDITPRITWA 292 FIP+ F ++ + + K+++ + + S R R++ RI W Sbjct: 245 FIPFTFSYVFGISLNGAMLYIVESLWFLFKVLIIYIAAVTIVRTSFGRFRIEQASRIFWV 304 Query: 293 GFGFAFLAFVSLL 305 L ++L+ Sbjct: 305 HVNLIALLGLALV 317 >UniRef50_Q2WAW1 Formate hydrogenlyase subunit 4 n=2 Tax=Proteobacteria RepID=Q2WAW1_MAGSA Length = 315 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 4/310 (1%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 ++L+ L+Q +++ A++PL++G R+ ++RL+ R G Q YRDI +LL +++V ++ Sbjct: 3 AILWQLLQIVLVVAISPLITGWVRLVKSRLNGRIGASPFQPYRDIYRLLQKEAVVAHSAS 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVFR+ PYV G A +P T L Q DLI L+ L +ARF+ A++G+D G+ Sbjct: 63 WVFRVAPYVTFGAAWLAACIVPAFTTNLFLAQAADLIALVALLGVARFWTALAGMDVGTS 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F +GASRE M+ L EP +L+ + + ++G+T + I V + + L LAL A Sbjct: 123 FGGLGASREMMISSLAEPAMLMVTFSLSLISGTTAPAQIIAFVLSGGVGIEVSLGLALAA 182 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 E G++P D EL E + EYSG +M+ ++ + + + G+ Sbjct: 183 LVMVAIAENGRIPIDNPATHLELTMVHEAMVLEYSGRHLALMEGAGMVRLTLFMALIGGL 242 Query: 239 FIPWGQM-ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F PWG A +L+ L + K V + +FE S+A++R+ Sbjct: 243 FAPWGMAQPGGDAVAVLVGLAAFLAKCFVLATALGVFETSIAKMRVFRYADFLGGALLLG 302 Query: 298 FLAFVSLLAA 307 LA + L + Sbjct: 303 LLATIFLYVS 312 >UniRef50_UPI000038E58B NADH dehydrogenase subunit H n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E58B Length = 351 Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 123/326 (37%), Gaps = 30/326 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 ++ ++ + + L I R AR+ R GP G+LQ D+ KLLG++S+ Sbjct: 24 YLIQTIVVIVFVGISFVALIYIFRKYMARIQRRVGPNRVGKFGLLQLIADLFKLLGKESI 83 Query: 56 GP-DASGWVFRLTPYVMVGVMLTIATALPVV-----TVGSPLPQLGDLITLLYLFAIARF 109 P ++L P +++ + LP + LI + L +I Sbjct: 84 MPAKRDDLAYKLAPAIVIIGTILAFILLPYGDLAYFGSIAVTHSRVTLILMFGLLSILPI 143 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVA-----------GSTNIS 158 ++G+ T S + +G R + E +++ + + G ++S Sbjct: 144 GEILAGISTKSNYALLGTMRGVAKDISFEIPMMISVLAIVMITSRSYVTGTAITGGLSLS 203 Query: 159 NITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG 218 I + + I L L + PFD+ E++ EL G +EYSG FG Sbjct: 204 GIV---SNEVIPYGIIEPLGLLIFYISMVARASMSPFDMGESDSELISGYTTEYSGMRFG 260 Query: 219 VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSM 278 + G+ + + +++ + + ++K V+ VL+ + ++ Sbjct: 261 LFYVGLFGMVYLTSFIISILYLGGANGPYESY----VGFFYLLIKTVILVLIAFVVWVTL 316 Query: 279 ARLRLDITPRITWAGFGFAFLAFVSL 304 R+R+D + W +A + Sbjct: 317 PRIRIDRFVNLGWKYLLPLSMANLVY 342 >UniRef50_Q2FKS6 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Methanomicrobia RepID=Q2FKS6_METHJ Length = 313 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 150/305 (49%), Gaps = 3/305 (0%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S ++ + + ++P + + +AR+ R+GP +LQ Y ++ KL ++++ + +G Sbjct: 5 SFIFAFLNVAFVLVISPFFMMVIKKVKARVQGRQGPHLLQGYYNLAKLFRKETLYSEYAG 64 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 ++ R+ PY + ++L A +P+ + ++I LYL R A+ GLD S Sbjct: 65 FISRIAPYAALSILLVAAVMVPIFWIPEQELVTANIIVFLYLLVTGRLLIALLGLDAAST 124 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F +G+SRE L ++EP+ ++ V GS +I +I T + + ++L Sbjct: 125 FGGMGSSREMSLSAIIEPVTVVVFAALVYVTGSFSIHDIFRTATTMFPAYNPTVLLLSVP 184 Query: 182 CAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 +E G++P D E EL EG L + SG + + ++KQ +++ + + + Sbjct: 185 LFILIIVETGRVPVDNPETHLELTMVHEGMLLDTSGRNLALFELSHAVKQTLLMAILLNI 244 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 +P G +AG L+L V+ ++K V ++I LFE++ A++R P + F F+ Sbjct: 245 ILPAGIALEMSAGVLILGGVLFLLKGTVLCVIIGLFESAYAKMRFFQIPNLFMIAFFFSI 304 Query: 299 LAFVS 303 L Sbjct: 305 LTIFI 309 >UniRef50_A3ETD7 Putative formate hydrogenlyase subunit 4 (HycD) n=2 Tax=Leptospirillum sp. Group II RepID=A3ETD7_9BACT Length = 320 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 149/304 (49%), Gaps = 3/304 (0%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFR 65 L + +++ +APL +G + +A L NR PG+ Q RD KLL ++++ P+ S +FR Sbjct: 14 SLFRMILVLVLAPLFTGWIGMVKALLQNRTPPGLFQPLRDWSKLLSKETIVPEGSSALFR 73 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 TP + ++L + +PV+ G +GD + L + A R A+ DTG+PF + Sbjct: 74 WTPPAVFSLLLVSSLLVPVLATGGKPIVIGDALVLTGIMAFVRVLMALGAFDTGTPFGHL 133 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 G RE M+G L EP +L ++ + +GST D + L + LV A Sbjct: 134 GGRREMMVGFLAEPATILVIFTTSLFSGSTMTYQTADALRSGSLLPTPSLVFGALAFLLI 193 Query: 186 TFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 E ++P D E + E L EY+G +M+WG ++K +V + + +G+F PW Sbjct: 194 LLGENARIPIDNPATHLELTMIHEAMLLEYAGPPLALMEWGSAIKLVVYVLLGIGLFFPW 253 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 G T L A V ++KL+ LV+ + E MA+LR+ P F A L F+ Sbjct: 254 GLSGTEGPEALASAGVFLLLKLLAAGLVLGILEALMAKLRIFRVPEFMTLAFLLAILGFL 313 Query: 303 SLLA 306 S Sbjct: 314 SHFV 317 >UniRef50_C1TPP1 Formate hydrogenlyase subunit 4 n=2 Tax=Synergistaceae RepID=C1TPP1_9BACT Length = 332 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 14/320 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPD-A 59 M V+ + L++ A L G+ R A + R GP +LQ DI+KLLG++++ P A Sbjct: 7 MRVIAGIALMLLITVFAVLFEGVDRKLHAVMQRRIGPPLLQPVYDILKLLGKENIVPRWA 66 Query: 60 SGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTG 119 + F P+V + + + +P+ ++ L GDLI +LYL +++ A+ G +G Sbjct: 67 TPVFFHGGPWVAMIASMMVFMYIPMGSLPPVLNGSGDLILILYLLSLSGVAVAVGGFASG 126 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQV---------AGSTNISNITDTVYHWPLS 170 SP +GA RE +L + E L + + A S T + Sbjct: 127 SPIANVGAQREMILMMSYEVPLAIVVSTLAWFAYKLGMPGHPFSLETYVATSVWSVVGKA 186 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + L+ A E GK D+ EA+ E+ EG EYSG ++ G +L+ Sbjct: 187 GFLGLICLFVAILTVIPGETGKGLMDIPEAKTEILEGVTVEYSGVNLALLHIGFNLRGAA 246 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALV---IAIVKLVVG-VLVIALFENSMARLRLDIT 286 + + V +F P+ + G+ +A++ VK+ + V + + RL++ Sbjct: 247 ISALVVSLFFPFSLGKAIGLSGVPMAIIDFPWFWVKVFLVEVFGVTFLRTAFGRLKIWQA 306 Query: 287 PRITWAGFGFAFLAFVSLLA 306 WA G LA + L++ Sbjct: 307 SHFYWAQVGALSLAGMILIS 326 >UniRef50_Q2FTW3 Membrane bound hydrogenase subunit mbhM n=6 Tax=Euryarchaeota RepID=Q2FTW3_METHJ Length = 343 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 19/322 (5%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP-DASGW 62 + ++ L L GI R+ AR+ R+GP + Q + DI KLL + SV P +A Sbjct: 10 VGAVLITLFGIIAGLFLMGIDRICAARMQMRQGPPLTQPFTDIRKLLCKDSVVPANAIPS 69 Query: 63 VFRLTPYVMVGVMLTIAT------ALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 +F P V +T+ LPV T + + GDLI ++YL + G Sbjct: 70 LFNAAPIVAFASAVTVLFYLPLGSILPVGTPLPIIGEYGDLILIMYLLTVPALAMVAGGF 129 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAA--------QVAGSTNISNITDTVYHWP 168 +GSP+ ++GA RE + + E L + + A + S N Sbjct: 130 ASGSPYASVGAQREMVTMIAYEFPLAIAIVAIAWRLAVAGLVMPFSVNTIAAHPIWTEVG 189 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 + I +L L A+ T E+ ++P D EAE EL G L EYSG + ++ K Sbjct: 190 PAGIIGCILLLIVLAWVTPAELSRIPCDTPEAETELCGGLLVEYSGRNLALFSLSMAAKL 249 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLL---LALVIAIVKLVVGVLVIA-LFENSMARLRLD 284 + + + V +F PW G++ + L+ ++K++V + L MAR R++ Sbjct: 250 VAMAGLAVLLFFPWNLSPVLGLSGIMGAGVDLLFFLLKVIVVMFFSVSLVRVVMARFRIN 309 Query: 285 ITPRITWAGFGFAFLAFVSLLA 306 + W L + L+ Sbjct: 310 TVVSLYWGWLTTIGLIGMFLII 331 >UniRef50_Q85UH6 NADH-ubiquinone oxidoreductase chain 1 n=18 Tax=Coelomata RepID=Q85UH6_CIOSA Length = 344 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 115/313 (36%), Gaps = 25/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQ- 53 + +++ I L L + LL + R R+GP G++Q D KL+ ++ Sbjct: 3 LVIVFYFIFILFLLLMVALLVLLERKVLGLAQIRKGPNIVGIYGLMQTILDGGKLILKKL 62 Query: 54 SVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 V + + F L+P + + L +P ++ L + ++ + Sbjct: 63 MVLFNIRKFFFLLSPILGFVLSLMNWFFIPTP--FILFHSEYGILLTLVISSLLVYTTLW 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G + + ++ IG R + E +L + + + GS N + + Sbjct: 121 AGWGSNNIYSLIGGIRGVAQMISYEVVLGFFIMLLLLLMGSYNWEFFLYFQSSYVFWGGM 180 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 + + + E+ + PFDL E E EL G EY G F ++ G + + Sbjct: 181 FMF--MVSWIGMMLAELNRAPFDLIEGESELVSGFNVEYGGFIFALLFLGEYMNIWFMSW 238 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + + +F G ++K V VLVI + + R + ITW Sbjct: 239 ITILLFFGGGY--------------FLVIKSFVVVLVILYIRSLLPRFKFTDLIMITWKI 284 Query: 294 FGFAFLAFVSLLA 306 + L F +L Sbjct: 285 YLPLVLMFFFVLI 297 >UniRef50_Q979M4 NADH dehydrogenase I chain E n=3 Tax=Thermoplasmatales RepID=Q979M4_THEVO Length = 346 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 117/316 (37%), Gaps = 18/316 (5%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + + + +F + + R ARL R GP G LQ D IKL+G++S+ Sbjct: 24 YIFETIFFLIFVFVSLIAMIYLFRKYMARLQLRYGPNRVGKFGSLQLIADAIKLVGKESI 83 Query: 56 GPD-ASGWVFRLTPYVMVGVMLTIATALPVV-----TVGSPLPQLGDLITLLYLFAIARF 109 P + ++ PY++ ++ +P + LI A+ Sbjct: 84 LPKLRDDFAYKTAPYIVFIGLVVGFILIPYGDFYWIGSLTITHSDVSLILFFGAIAMMPI 143 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTN--ISNITDTVYHW 167 ++G+ + + + +GA R V E ++L + + N + V Sbjct: 144 GEILAGISSHNKYALLGAMRGVAKDVSFEVPMMLSAIALVMMDSAVNKTPLEFSSLVSTQ 203 Query: 168 PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLK 227 + I L L A PFDL+E++ E+ G +EYSG FG+ G+ Sbjct: 204 FIPFGILQPLGLFVFMVAMIARSSYTPFDLSESDSEIVSGYSTEYSGMRFGLFYMGMFGS 263 Query: 228 QLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITP 287 + + +++ + + ++K ++ VL+ L SM R+R+D Sbjct: 264 IFLGSLVISLLYLGGYNGPYSSYA----GFIYLLIKGLIMVLISFLIWLSMPRIRIDRFV 319 Query: 288 RITWAGFGFAFLAFVS 303 W + + Sbjct: 320 NFGWKILLPIAIINLI 335 >UniRef50_A8JYL1 Formate hydrogenlyase subunit E n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL1_THELI Length = 293 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 7/232 (3%) Query: 7 LIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRL 66 LI ++ + PLL G+ R +A + NR GP +LQ + DII LL S+ P S FRL Sbjct: 3 LIGTIIAPFLPPLLDGVARKVKAMIQNRVGPPILQTWYDIITLLSMDSILP-TSSLTFRL 61 Query: 67 TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIG 126 PYV + L +A LP + + + GDLI +Y+F + L + ++ G Sbjct: 62 APYVALASALCMALMLPYGSD-AIINFGGDLIAFIYVFTLFSAALVFGALSVDNSYSHAG 120 Query: 127 ASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFAT 186 A+RE L ++ +P+ + + A GS +I+ I + +S S ++ A + T Sbjct: 121 ANRELTLSLVFKPLFAITIGTFALKTGSLSITEIARS-----ISPSPSIIGAYLLLLYVT 175 Query: 187 FIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 ++E G +P+D+AEAE E+ EGPL+EYSG G+ KW + +K+ ++ +F Sbjct: 176 YVESGFIPYDIAEAETEILEGPLTEYSGRLLGLFKWALQIKRFAMIWLFASF 227 >UniRef50_A3E7R8 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=101 Tax=Vespertilionidae RepID=A3E7R8_9CHIR Length = 300 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 76/307 (24%), Gaps = 13/307 (4%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M + L + + L+ + R R GP G+LQ D +KL ++ Sbjct: 1 MYFMNLLATIIPILLAVAFLTLLERXXXGYXRXRXGPNIVGPYGLLQPIADAVKLFTKEP 60 Query: 55 VGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 + P S Sbjct: 61 LQPLTSSLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 + GS +S + T + +P Sbjct: 121 XXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXSIXLMNGSFTLSTLITTQEYT--WLVLP 177 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 +T E + PFDL E E EL G EY+G F + +++ + Sbjct: 178 SWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGSFALFXLAEYANIIMMNAL 237 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 + +F+ F + + VK ++ S R R D + W Sbjct: 238 TITLFLGAYNNPMFPE----MYSINFTVKALLFTTFFLWIRASYPRFRYDXLMHLLWKNX 293 Query: 295 GFAFLAF 301 L Sbjct: 294 LPLTLVM 300 >UniRef50_A0MJG3 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=4 Tax=Squamata RepID=A0MJG3_9SAUR Length = 200 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 8/191 (4%) Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 SG + S + +GA R + E L L + A ++G ++ +T H Sbjct: 1 ILWSGWSSNSKYPLMGAMRAVAQIISYEVTLGLIIISMAIMSGGYSLMQFMETQEHM--W 58 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + +T E + PFDL E E EL G E+S F ++ L+ Sbjct: 59 LLLSSWPLAMMWFTSTLAETNRSPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILL 118 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + + +F+ G M L++ K + ++ S R R D + Sbjct: 119 MNTLSTMMFLNPGTMNPQMFTINLMS------KTMALTILFLWIRASYPRFRYDQLMHLL 172 Query: 291 WAGFGFAFLAF 301 W + LA Sbjct: 173 WKQYLPLTLAM 183 >UniRef50_B6IT65 Hydrogenase-4 component C, putative n=7 Tax=Alphaproteobacteria RepID=B6IT65_RHOCS Length = 323 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 162/311 (52%), Gaps = 4/311 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 ++VL+ +Q LV+ A+APLL+G+ R +ARL RRGP VLQ YR +++L +++V + + Sbjct: 10 LAVLFQCVQMLVVLALAPLLTGVVRGIKARLQGRRGPPVLQPYRALLRLTRKEAVVAENA 69 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 W+FR TPY++ ++ A +P T L + DLI L+ L ARFF ++ +D G+ Sbjct: 70 SWLFRATPYIVFTMLWLAAGLVPTFTTALALAPVADLIALVALLTTARFFTGLAAMDIGT 129 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F +GASREAM+ L EP +L ++ A + +T+++ I D + + L L L Sbjct: 130 AFGGLGASREAMISALAEPAMLAVIFTLAILLQTTSLAAIVDGTLGQGVGLRVSLALGLI 189 Query: 181 ACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + E G++P D EL E + EYSG +M+ L+ L+ + + + Sbjct: 190 SLIMVAIAEAGRIPVDNPATHLELTMVHEAMVLEYSGRHLALMEAAGMLRLLLFMALILC 249 Query: 238 VFIPWGQM-ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 VF+PWG + L + KL+ + +ALFE ++A++R+ Sbjct: 250 VFVPWGIAQPGDGPTAWAIGLGSFLGKLLAAAVALALFETTVAKMRVFRVGEFLGGALLL 309 Query: 297 AFLAFVSLLAA 307 LA + L + Sbjct: 310 GLLAAIFLFVS 320 >UniRef50_Q9B8A1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Trichinella spiralis RepID=Q9B8A1_TRISP Length = 299 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 104/293 (35%), Gaps = 28/293 (9%) Query: 18 PLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRL-TPYV 70 ++ + R R GP G++Q D +KL + + + F L P + Sbjct: 20 AFVTLMERQYIGISQRRLGPNKVSITGLMQPILDGLKLTLKSTKKTNKLNPTFYLLMPIM 79 Query: 71 MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASRE 130 + + LP++ +P+ +L+ + L I F +SG + S + G+ R Sbjct: 80 NLTLFTLFWWGLPLLY--NPISFQVNLLFTITLMGIMSFGIVLSGWVSNSKYATYGSLRS 137 Query: 131 AMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEM 190 + E L L + + S N++ Y++ + ++ L E Sbjct: 138 MSQSISYEVCLSTTLLMIMMLKDSYNLATTKTGFYYFEPTITLAL---TIPATIMILAET 194 Query: 191 GKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTA 250 + PFDLAEAE EL G E+S F + +++ +F + +PW Sbjct: 195 NRSPFDLAEAESELVSGFNIEFSSVEFAFLFMAEYGMIILLSTLFSTLLLPWCSPLLTLL 254 Query: 251 GGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 + + ++ R+R D + W ++ + Sbjct: 255 LISSIIMS----------------RSTFPRIRYDTLMSLMWKSLLPVMISMLM 291 >UniRef50_A8VTY0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Bothriometopus macrocnemis RepID=A8VTY0_9NEOP Length = 309 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 113/313 (36%), Gaps = 28/313 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-- 52 M + + A+ + S R A + NR GP G+LQ + D +KL+ + Sbjct: 13 MESIQLIFLAVGVLLSVAFFSLFERKVLAIIQNRVGPDKVGIVGILQPFSDAMKLISKTE 72 Query: 53 QSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFA 112 G ++ +P +M + + P + ++ ++ + + Sbjct: 73 SPSPSKKVGVLYFFSPAIMFVISFIVWITFP--SNWEIYSFDKSMLFVIACMGSSVYGLV 130 Query: 113 ISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS 172 ++G + S ++ IG+ R + + E +L+LGL + + G+ ++ I Sbjct: 131 MTGWFSSSKYSLIGSVRAIGMSISYEIILVLGLVLMMFLLGTMSVKYIISFQEQM--WLF 188 Query: 173 IPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVL 232 PL + E G+ PFDL+E E EL G EY G + ++ + + Sbjct: 189 FPLWFVFIILLISFLAESGRAPFDLSEGESELVSGYSVEYGGISYTLIFLSENSSIIFSS 248 Query: 233 QMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWA 292 + +F G + T + ++ ++ R+R D + W Sbjct: 249 VILSSMFFAMGSILTLPG----------------LIFLVVWIRGTVPRMRFDQLMMMCWV 292 Query: 293 GFGFAFLAFVSLL 305 L L+ Sbjct: 293 KILPIMLFIFGLV 305 >UniRef50_B6YT75 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT75_THEON Length = 300 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 8/307 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M + + +VLF + P L GI R +AR+ RRGP ++Q + D+ KLL SV P Sbjct: 1 MDYVSIIAAPIVLFLLPPFLDGIGRRIKARIQYRRGPPIMQTFYDLEKLLKLPSVLP-TE 59 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 G +FRL PY+ + + LP + L LI Y+ A+ ++ + Sbjct: 60 GPIFRLAPYIALASAIAGGLMLPFGSE-PVLAFGKSLIVFFYVMAMVSVVMILAAFSVQN 118 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F+ IG RE ML + +EP+L + V A G+ N++ + + + S+ + LA Sbjct: 119 AFSHIGGHREVMLILSIEPVLAVVFGVLAFKLGTLNVAEM-----PFSANLSLSVALAYI 173 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A+A ++E G +PFD+AEAE E+ GPL+EYSG GV K+ + +K++V+L + + + Sbjct: 174 LLAYAVYVEGGFVPFDIAEAETEVIGGPLTEYSGRLLGVFKYALLVKRVVLLWLLASMIV 233 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 M + + LV +V + + E + ARLR+D + F + Sbjct: 234 -IPAMRSLGITSSMALLVAQLVVTFLLYSLAVAVEAANARLRIDQAVSLNKKVFLMSLAV 292 Query: 301 FVSLLAA 307 + L Sbjct: 293 LIIALVG 299 >UniRef50_B6YU99 Membrane bound hydrogenase, MbhM subunit n=8 Tax=Thermococcaceae RepID=B6YU99_THEON Length = 330 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 17/321 (5%) Query: 2 SVLYPLIQALVLFAVAPLLS----GITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGP 57 +++YP+ + L+A L S GI R AR+ R GP +LQ D KL ++++ P Sbjct: 6 NIIYPVAGLIGLYAFVSLASLVWEGIDRKLVARMQRRVGPPLLQPLYDFFKLASKETIIP 65 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 + + ++FR P + + + + P+ L GD+I +YL + FF + G+ Sbjct: 66 NTANFMFRAAPVLALATAIALLAYTPMGFA-PLLASKGDVIVFIYLLTLIGFFKILGGIS 124 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISN--ITDTVYHWPLS----- 170 +GSP+ IGA+REA + V EP ++L L+ G ++ + Y + + Sbjct: 125 SGSPYAKIGAAREAAIMVSREPAMMLALFAIIWRLGKLGVNKPFSMEVFYQYNIWEIGTP 184 Query: 171 -QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQL 229 I V+ L E+ F++ +AE+E+ EG L+EYSG ++K +LK Sbjct: 185 LSLIGAVILLYVFVIWLASEIEVGYFNIPDAEEEIAEGLLAEYSGRYLALLKLTKALKTY 244 Query: 230 VVLQMFVGVFIPWGQMETFTAGGL---LLALVIAIVKLVVGVLVI-ALFENSMARLRLDI 285 + + V +F PWG + F GL ++ L+ +K+ + + + ++F + RL++ Sbjct: 245 IAASLVVAIFFPWGIADYFNLTGLPANVVNLLFHTLKVFILLFAVQSVFRATTGRLKITQ 304 Query: 286 TPRITWAGFGFAFLAFVSLLA 306 W A L L+A Sbjct: 305 AVDFLWKNVFLASLIGTLLIA 325 >UniRef50_A0QMU2 Hydrogenase-4, C subunit, putative n=18 Tax=Actinomycetales RepID=A0QMU2_MYCA1 Length = 319 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 149/299 (49%), Gaps = 5/299 (1%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS + Q L + A APL+ G R RARL R G GVLQ +RD+ K LG+Q + P + Sbjct: 4 MSYVAGAAQILAVMAGAPLVIGAMRQVRARLEGRGGGGVLQPWRDLRKQLGKQQISPQGT 63 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 VF P ++ G L I P+V GSPL DL ++ L + ++G+DTG+ Sbjct: 64 TVVFAAAPAIVAGTTLLIVAIAPIVATGSPLDAAADLFAVVGLLFLGTVALTLAGIDTGT 123 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNIT-DTVYHWPLSQSIPLVLAL 179 F +GASRE + LVEP +LL ++ + AGS N+ + +T+ H S+ +LA Sbjct: 124 SFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVTNTIDHPGQVVSLTGLLAF 183 Query: 180 CACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A E G+LP D EL E + EY+G +++W ++ V+L + Sbjct: 184 VALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLALVEWASGMRLTVLLALLA 243 Query: 237 GVFIPWGQMET-FTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+PWG +A + + L K+ V + +A E +A+LRL P + F Sbjct: 244 NLFLPWGIAGGHPSAVDVAIGLAAITAKVTVLAVALAGAEVFIAKLRLFRVPELLAGSF 302 >UniRef50_C5A3D5 Formate hydrogenlyase I subunit E (Mhy1E) n=2 Tax=Thermococcus RepID=C5A3D5_THEGJ Length = 305 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 + V + L+ L++F + P L GI R +ARL RRGP ++Q + D+ KL SV P S Sbjct: 5 IKVGFELVGILIIFLLPPYLDGIARRVKARLQYRRGPPLMQTWYDLQKLFNLPSVKPTKS 64 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +F P++ + ++ A LP P+ +L+ Y+ + F + GL + Sbjct: 65 -LLFTAAPFLALASAISAALLLPYG-NVIPVDFGFNLVVFFYVILMVSVFLILGGLSVQN 122 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 F+ IGA+REA L + VEP++ + V A AGS NI++I L + LVLA Sbjct: 123 AFSHIGATREAQLILTVEPLIAILYGVLAYNAGSLNIADIIA-----NLHLTPSLVLAYI 177 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A A+A ++E G +PFD+AEAEQE+ GPL EYSG GV + I +K+ +L FV + Sbjct: 178 ALAYALYVESGFVPFDVAEAEQEVIGGPLGEYSGRLLGVFYYAIHIKRFALLWFFVSLLT 237 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 T L L + + V +IA E + ARLR+D ++ F + Sbjct: 238 MPWIGPINTPERAALVLALQFILTVAFYPIIAALEATNARLRIDQVVKMNVRMFFAGLVI 297 Query: 301 FVSLLAA 307 Sbjct: 298 LGMAFMG 304 >UniRef50_C4NCG7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Schlettererius cinctipes RepID=C4NCG7_9HYME Length = 318 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 121/312 (38%), Gaps = 21/312 (6%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV- 55 L ++ + + L+ + R + + NR+GP G Q + D IKL +++ Sbjct: 11 FLSLMMVLIGVLLSVAYLTLLERKLLSYMQNRKGPNKVGIIGFFQPFSDAIKLFSKENFE 70 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 + +++ ++P ++ +ML + +P++ +I ++ ++ + + G Sbjct: 71 LEKVNMYLYFISPIFLMLLMLMMWILIPMIINLMMFDM--GIIIMICFMSMTVYGLMMCG 128 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ +G+ R V E +++ + V + GS + + + LS Sbjct: 129 WSSNSIYSILGSIRSIAQTVSYEVSMIIMMLVIVLMVGSFDFYELLKYQKN--LSFMFFF 186 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + IE+ + PFDL+E E EL G +EY F ++ L + + Sbjct: 187 FMLMLMFMVMMLIELNRSPFDLSEGESELVSGFNTEYMSGMFALIFLSEYGMILFMGMLM 246 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 + +F L+ ++ I+ V+ + S R+R D +W Sbjct: 247 MMMFWGG----------LIYYSMMFIIFYFFMVIFVIWSRASFPRIRYDQLMFFSWFNML 296 Query: 296 FAFLAFVSLLAA 307 + L Sbjct: 297 PSTLNLFMFYLG 308 >UniRef50_B8I2P8 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Clostridium RepID=B8I2P8_CLOCE Length = 312 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 10/311 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 S+L + Q + L +APL +GI R ++++ ++ G + Q Y D+IKLL + V S Sbjct: 4 SILKFIFQMIFLLLIAPLFTGIIRKIKSKIQHKIGASIFQPYYDLIKLLKKDLVVSSTSS 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 W++ + PYV L A LP++ DL+ ++YL R F A++GLDTGS Sbjct: 64 WIYTVAPYVYFITSLAAAMCLPIIYQFKGFSFYTDLLVIVYLLVAGRIFMALAGLDTGST 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAG--STNISNITDTVYHWPLS-QSIPLVLA 178 F +G+SRE ++ LVEP L L + ST++ +I + + S +L Sbjct: 124 FGGMGSSRELLVSALVEPALFLIIITVGANPEVASTSVFSIYEYAVKESIGAFSTVNILL 183 Query: 179 LCACAFATFIEMGKLPFDLAEAEQEL---QEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 A E ++P D EL E EYSG ++ G +KQLV + Sbjct: 184 FVAMLMVMIAESSRIPVDDPSTHLELTMVHEAMTLEYSGRHLAFIEMGSYIKQLVFMTFM 243 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 + IP G +L L I ++KL+V + A+ E + + RL P Sbjct: 244 ANILIPVG----LNMENILAGLSIYLLKLLVITFLAAIIEINTVKFRLFSLPNYAAIALI 299 Query: 296 FAFLAFVSLLA 306 + L F++ Sbjct: 300 ISVLGFLTRFV 310 >UniRef50_D2D0L0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Laodelphax striatellus RepID=D2D0L0_9HEMI Length = 317 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 104/313 (33%), Gaps = 22/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M L LI ++ + R + R+GP G+LQ D IKL ++S Sbjct: 1 MFFLNFLILMGLILISVAFFVLLERKVLGYMQIRKGPFKVGFLGLLQPLSDAIKLFSKES 60 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + ++ P++ +GV + + P + + + L+ + + + Sbjct: 61 YYIYFGNLLIYYFMPFLGLGVSMNMWVLYP--NLFNFISFPLGLLFFIVCSGFLVYGILL 118 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 S + S ++ IG R G+ E + L ++ S N++ + + Sbjct: 119 SSWASNSSYSLIGCLRSVAQGISYEVCMFLIMFNFIFFFSSFNLTKFFFSQQ--MNWFIL 176 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 E + PFD +E E EL G +EYS F + + + Sbjct: 177 MGYPMFLILYACMLAETNRSPFDFSEGESELVSGFNTEYSSFNFSFIFLSEYTNMIFMSF 236 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F+ + +K++ S RLR D I W Sbjct: 237 LLSLMFLGGDYFS-----------LFFFLKVMSVNFGFIWIRGSFPRLRYDKLMMICWKI 285 Query: 294 FGFAFLAFVSLLA 306 + L F + Sbjct: 286 YLPVTLNFFFIFL 298 >UniRef50_C0J6S5 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Paracyclopina nana RepID=C0J6S5_9MAXI Length = 304 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 107/303 (35%), Gaps = 24/303 (7%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-QSVGPDASGWV 63 + L+ + R R GP GVLQ + D +KLL + +A+ ++ Sbjct: 16 VPFLVSVAFLTLLERKILGFSQIRIGPFKVGVWGVLQPFADAVKLLAKTSEANSNANKFL 75 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + P M+ + L + +P + +G+ I + + +++ + +SG + S + Sbjct: 76 YFSAPVFMLSITLMLLNLVPCLELGNKWSL--GFIFFIVILSLSVYPLLLSGWASNSKYA 133 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 +G+ R + E L + + + S N+ I+ +S L Sbjct: 134 VMGSVRGVAQTISFEISLAIIFMIMIILFLSMNLFFISVIK----VSVVFVSPLLGLIWF 189 Query: 184 FATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWG 243 IE + PFD AE E EL G EYS F ++ ++ V + Sbjct: 190 IILVIETNRTPFDFAEGESELVSGFNIEYSSISFVLIFLAEYGSIMMFSIFSSLVLLGTP 249 Query: 244 QMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 + + + + + ++ R R D+ W F ++ Sbjct: 250 LFSFNS-----------VCMAICFSGLWIILRSTFPRYRYDLLMSTAWKSFLPLSISMFL 298 Query: 304 LLA 306 +L Sbjct: 299 VLL 301 >UniRef50_C8YLY6 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Apocrita RepID=C8YLY6_9HYME Length = 310 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 111/313 (35%), Gaps = 25/313 (7%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + L L++ L+ + R + +R+GP G++Q D +KLL ++ Sbjct: 9 IFFFNYLFLILMVLVSISFLTLLERKILGIVQDRKGPNKVSVGGIIQPMGDGVKLLSKEV 68 Query: 55 VGPDASGWVFRL-TPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + S + + +P + +ML P + S L D + +L + ++ + + Sbjct: 69 MWIYKSNFYYYFFSPCMSFIIMLLCWLIYPYLY--SYLNSNLDFLLILMVLSLGVYGIML 126 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 +G S ++ G+ R + E L+ + + S + + + Sbjct: 127 AGWSANSMYSMFGSIRAISQTISYEVTLVFLMVYQFFFSCSVSFKKLMEFQ--NGFMFMF 184 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L + E+ + PFDL E E EL G EY S F ++ L + Sbjct: 185 YLFIVFLMVFIVMLAELNRTPFDLVEGESELVSGFNVEYISSTFALIFLAEYGMILFMGM 244 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 MF+ ++ + ++ V +I L + R+R D + W Sbjct: 245 MFMIMYFGCSSLGWVGL--------------ILFVYLIILLRGVLPRVRYDSLMFMGWKS 290 Query: 294 FGFAFLAFVSLLA 306 + + + Sbjct: 291 VLPVSMNLLIIYL 303 >UniRef50_B9LA02 Carbon monoxide-induced hydrogenase, CooK subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA02_NAUPA Length = 319 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 122/310 (39%), Gaps = 12/310 (3%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG-W 62 L A+ + + R+ ARL R GP + Q + D++KL ++ + P + Sbjct: 8 FLIFPGGLFALALGIFMLSLERIVVARLQGRVGPPIYQNFIDVVKLFNKEILIPKDAKES 67 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 VF+ P + ML + +P+ V DLI L+Y+ A+ + G + SP+ Sbjct: 68 VFKYAPLIGFAGMLAMLYFIPIPGVYEGSGVNSDLILLIYVMALPAIAHILGGGASSSPY 127 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGS----TNISNITDTVYHWPLSQSIP-LVL 177 AI +RE L ++ E + ++ + A G ++ I Sbjct: 128 AAIAVNRELKLMLVYEMVFVIIAFSIALYVGHGDAVFSLKKIMQYQQTHGSFLLDWKFWP 187 Query: 178 ALCACAFATFIEMGKLPFDLAEA-EQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 A+ A + PF +A + ++ +G L E+S + + +LK +++ +F Sbjct: 188 AVIAFVIFVLATLELPPFQIAHHNDADVMDGFLIEHSSIPLAIYEMTDALKIVLLSIVFQ 247 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F P A +L L+ I K VV V+ +L + R+D + Sbjct: 248 IFFFP-----VVIADDAMLNLLWFIAKTVVFVMFFSLIHAILPSYRIDQAFKFLLIVPTT 302 Query: 297 AFLAFVSLLA 306 L + L+ Sbjct: 303 LSLITLVLVI 312 >UniRef50_B8Y962 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pediculus humanus corporis RepID=B8Y962_9NEOP Length = 289 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 114/309 (36%), Gaps = 28/309 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + + L L S R + R GP G+LQ D KLL + ++ P Sbjct: 1 MQSVFIVLSLLICVAYFSLFERKLLSLEQIRLGPNKVGPIGILQPLSDAPKLLSK-TICP 59 Query: 58 DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLD 117 + W + P++ + ++ P+ + L+ L+++ +++ + +G Sbjct: 60 QSESWELFIMPFITFMLSVSWW--YPLYFPKTLWESNNSLLILIFISSVSVYALIFTGSL 117 Query: 118 TGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVL 177 S ++A+G+ R L + E + + A V S +I + + I +++ Sbjct: 118 PKSKYSALGSLRAITLSISFELVFSTAMLSMAVVFNSFSIKFMATNQSVPNI---ISMIV 174 Query: 178 ALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 + E G+ PFDL E+E EL G EY GS + ++ SL + + Sbjct: 175 VGILVWTSLIAECGRTPFDLPESESELVSGFNVEYGGSRYVLLYLSESLLLTISSIIMSI 234 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +F + ++ + + + S R+R D W Sbjct: 235 LFTCGYNP----------------LVVLTWISISIVMRASNPRIRYDKCMMFGWEFSIPL 278 Query: 298 FLAFVSLLA 306 L F+S+ Sbjct: 279 ILMFMSIYV 287 >UniRef50_A6DB52 HYDROGENASE-4 COMPONENT C n=2 Tax=Epsilonproteobacteria RepID=A6DB52_9PROT Length = 308 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 110/285 (38%), Positives = 162/285 (56%), Gaps = 9/285 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPG-VLQEYRDIIKLLGRQSVGPDAS 60 ++ + ++Q L + AVAP G+ R+ RA++ R+GP Q YRD+ KL R V P + Sbjct: 4 TLFWMVVQVLAVVAVAPFFDGVARMIRAKMQARKGPPDPFQTYRDLYKLFKRGRVYPKNA 63 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSP-LPQLGDLITLLYLFAIARFFFAISGLDTG 119 WVF+ PY+M GV+ T+ ALP+ + DL +LYL A RF F ++ D+G Sbjct: 64 HWVFKYAPYIMFGVVATMLAALPITYATDFKAGVVSDLFVILYLGAFFRFIFGVASNDSG 123 Query: 120 SPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV-LA 178 + F AIG SRE M+GV VEP+++L L V +A ++N+ I V HW + P +A Sbjct: 124 NAFAAIGGSREQMIGVFVEPVIVLCLIVVMLLAKTSNLVEIQYMVKHWQIGYIYPSFAIA 183 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 A +A ++EM + P+DLAEAEQELQEG L EYSGS + + +KQ V++ +F+ + Sbjct: 184 SIAFLWAIYVEMARNPYDLAEAEQELQEGVLGEYSGSDLAISHMTMLIKQFVMIGLFLSI 243 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRL 283 F PW LLAL+I I+K V + +N R +L Sbjct: 244 FEPWNVEFP------LLALLIYIIKAGVFYVGAVFIDNFGPRYKL 282 >UniRef50_A9BJL9 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Thermotogaceae RepID=A9BJL9_PETMO Length = 300 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 18/308 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 MS L L+ + F L GI R A++H R GP Q + DI K L + S+ Sbjct: 1 MSYLIALMIVFIGFLWQVSLDGIQRKVTAKVHRRVGPPWYQTFMDIFKALTKSSI---TH 57 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 G+++ + +G + LP L + ++YL AI A+S +G+ Sbjct: 58 GFIYDFGVMMALGGTIATFMFLPFG-NIVAFNGLDNFFVVVYLLAIGSLGMAMSASGSGN 116 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL--SQSIPLVLA 178 + IG R + E ++ ++ V G+++++ + + + L Sbjct: 117 AWAGIGIMRALTQMLAYEVPFMIVVFGMIHVYGTSSLTELAHVQQMNGIFGWHIFTMPLG 176 Query: 179 LCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 + + K+PFD A E+ GP+ EY G FG++ LV + +FV + Sbjct: 177 AIVAFISLLGMLNKVPFDTPIAPTEIASGPMVEYGGKHFGMLILQHEFATLVEVGLFVSL 236 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 F+ G L+ ++K ++ L AR R++ + Sbjct: 237 FLGGG------------NLIEYLIKYFFVYTLVTLIYAVSARFRIENVVTYFYGVPIVLS 284 Query: 299 LAFVSLLA 306 L +++ Sbjct: 285 LVQTAIVI 292 >UniRef50_C6HVM8 Probable formate hydrogenlyase subunit 4 (HycD) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM8_9BACT Length = 322 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 94/309 (30%), Positives = 154/309 (49%), Gaps = 3/309 (0%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 +++ L+Q + +APLL G RA L NR G+LQ +R++++L ++ + P+ Sbjct: 11 LAIAISLLQMAFVLFLAPLLYGWIGTVRAILQNRSPAGILQPWRNLVRLFRKEMILPEGH 70 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 +F P + +M A +P + PL + D +TL+ LF++ARF A++ +D G+ Sbjct: 71 SPLFLAVPPLFFSIMAVAALLVPFLGTSPPLAPVADAVTLVGLFSLARFSMAMAAMDLGT 130 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 PF +G RE M+ L EP L+ L+ + +GST+I +I + PL L++A Sbjct: 131 PFGDMGGRREMMVAFLTEPATLMILFTVSLWSGSTSIPSILTSFSKGPLPFHPSLLIAAM 190 Query: 181 ACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A E +LP D E + E L EYSG +M+WG K L+ L + + Sbjct: 191 AFILVFLGENARLPIDNPSTHLELTMIHEAMLLEYSGPLLALMEWGSMQKLLLYLLLGID 250 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 F P G TF GLL ++ + KL + ++AL E+ A+LR+ P T + + Sbjct: 251 FFAPAGIPRTFALSGLLEGGILLLGKLFILGALLALIESLFAKLRIFRVPEFTALAYLLS 310 Query: 298 FLAFVSLLA 306 L F+ Sbjct: 311 TLGFLLHFV 319 >UniRef50_Q8HET7 NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=25 Tax=Formica RepID=Q8HET7_FORTR Length = 293 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 21/298 (7%) Query: 17 APLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW-VFRLTPY 69 L+ + R + R+GP G+ Q + D IKL ++ S + +F L P Sbjct: 1 VAFLTLLERKILGYVQMRKGPNKVMIIGMFQPFSDAIKLFNKELFYVYKSNYNLFYLCPV 60 Query: 70 VMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASR 129 +M VML P +T L L+ LL + + G + S ++ +G+ R Sbjct: 61 LMFSVMLMSWMLFPYITNIYFLNYSMLLLILLMSI--SGYTMIFMGWSSNSIYSMMGSMR 118 Query: 130 EAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIE 189 + E + +++ ++ S + + + + + + E Sbjct: 119 SVSQMLSYEVSFIFIIFILMIMSESYSFLDFMNYQIY--VWYLFIFYPLFLMYFISVLAE 176 Query: 190 MGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFT 249 + + P D E E EL G EY GF ++ + + V +F Sbjct: 177 LNRSPMDFIEGESELVSGFNIEYFSGGFTLIFLAEYGMIIFFSFLSVLLF---------- 226 Query: 250 AGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA 307 L + + + ++V ++ + R+R D + W L +V L+ + Sbjct: 227 TNLLKYSNMFMFMFIMVMSCLVIFMRGLLPRMRYDELMYLCWKIILPMILLYVLLIFS 284 >UniRef50_B3IUI3 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Leptotrombidium RepID=B3IUI3_9ACAR Length = 293 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 110/308 (35%), Gaps = 28/308 (9%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 ++ L+ L + + + ++H R GP G+LQ D +KL ++ P Sbjct: 3 IFSLLNILPILLAVMFFTLMEVQMLGKVHLRVGPFRVGLIGILQPISDFLKLFNKKFWIP 62 Query: 58 -DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 +S +++ TP++ V V L + L S +++ L ++ F+ ++G Sbjct: 63 VKSSLFIYLFTPFLCVFVGLIVW--LSYGGKNSITNTKWTILSFFCLSSLLVFYLLLTGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + SP++ +G+ R A + E L+ ++ + + S S Sbjct: 121 SSSSPYSMLGSYRSAAQTISYEVCLIFIIFSSIFFS----KSFSIWFNGEEAPSLLFVHP 176 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + F+ E + PFDL E E EL G +EY G + + + Sbjct: 177 ILFLVWMFSCLAEANRTPFDLTEGESELVSGFNTEYFGGLLSFFFITEYAFMIFLSFLTA 236 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F+ + +K + + ++ R+R D ++ W Sbjct: 237 MFFMGES---------------MFWLKQMFMISFFIFTRSAFPRMRFDWLMKMMWKNILP 281 Query: 297 AFLAFVSL 304 L + Sbjct: 282 IILMSLIF 289 >UniRef50_C7N623 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=7 Tax=Coriobacteriaceae RepID=C7N623_SLAHD Length = 939 Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 29/307 (9%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ L A++ + LL+GI R A++ R GP +LQ Y D+ KL+ + V ++ Sbjct: 654 LIGTLAFAILAPVIGCLLAGIDRKLTAKMQGRVGPPLLQPYYDVQKLIAKDDVHVNSVEG 713 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + + + G G+ + ++L ++ F ++ T SP+ Sbjct: 714 TYVTAALIFAVLA------------GGIFYGGGNFLLCVFLVTLSGLMFILAAYSTRSPY 761 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +GA REA+ + EPML+ G+ + S + + L Sbjct: 762 AEVGADREALQVMSYEPMLMFLAVGLFLTLGTFDASGVFLYDA----PPIVALWPIFIGL 817 Query: 183 AFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 F I++ K PFDL+ A QEL +G +E SG ++ + ++ L F Sbjct: 818 MFILTIKLRKSPFDLSYSHHAHQELVKGITTEMSGKTLAKIEVMHWCESVLFLGWVGMFF 877 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 + L+LV+A+V + + +N+ AR++ + W G + Sbjct: 878 VCHNP----------LSLVLAVVVAFLAFFLEIFIDNNFARVKWQSMLKWAWIISGVLGI 927 Query: 300 AFVSLLA 306 A ++ L Sbjct: 928 ANIAALV 934 >UniRef50_Q6SL32 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Armillifer armillatus RepID=Q6SL32_9MAXI Length = 305 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 106/306 (34%), Gaps = 25/306 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----GVLQEYRDIIKLLGRQSV 55 + L L+ ++ ++ + R + + R GP G LQ + D +KL+ + V Sbjct: 3 LGFLQVLVLLVMGVMGLAFVTLVERKILSLVQWREGPNKVGGGYLQPFSDALKLVSKGWV 62 Query: 56 G-PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 + + + ++ + +M+ + P L+ + + +++ + +S Sbjct: 63 VLGEGDLGGYVMGAWLFIFLMMLLWGMYPTFWG--VYSLEWTLLCFILVLSVSVYGLLVS 120 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S + +G R V E L+L + G + + + Sbjct: 121 GWMSNSKYGLLGGVRSVAQTVSYEVSLVLVVMYWVLYMGGYGLEVTME-----GVWLVFL 175 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 +L E+ + PFD +E E EL G EY F + + + Sbjct: 176 NILMFVIMGVVCISELNRSPFDFSEGESELVSGYNVEYGSLLFVYIFMSEYGFVVFWSGL 235 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F+ L +I +K+++ + + + R R D ++W Sbjct: 236 LGWMFM------------GGLGGLIGGLKVMLLSWGVLWWRGVLPRFRYDKLMFLSWGVL 283 Query: 295 GFAFLA 300 + L Sbjct: 284 LYCSLW 289 >UniRef50_A4YHY6 NADH dehydrogenase (Quinone) n=12 Tax=Sulfolobaceae RepID=A4YHY6_METS5 Length = 352 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 127/337 (37%), Gaps = 43/337 (12%) Query: 2 SVLYPLIQALVLFAVAPLLS--GITRVARARLHNRRGP--------GVLQEYRDIIKLLG 51 S P+I ++F LL+ R A AR+ R GP G LQ D +K + Sbjct: 15 SFFAPIILPGLIFTAILLLTTIWFERKAAARVQMRIGPYYASKRLGGYLQLVADALKFVF 74 Query: 52 RQSVGPDASGW-VFRLTPYVMVGVMLTIATALPV-----------------------VTV 87 + + P+ +F LTP ++V + +PV + V Sbjct: 75 SEVIVPEGVNPTLFALTPVLVVAMSFLPLAVIPVSVIPPSGSIFSIYFHDFYDPNVGLGV 134 Query: 88 GSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWV 147 L +++ +L + +I + T + F +GA RE+ L V + +LL+ Sbjct: 135 LVGLFTQYNMLLILAIESIYPAMIILMAWSTNNRFAIVGAVRESYLSVSYDVLLLMSTIS 194 Query: 148 AAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEG 207 A + ++ I + + LA A I + PFD+AEA+ EL G Sbjct: 195 MALEYHTLDLVKIV----QTGVPGILANPLAAVTFFIAMIIGSARFPFDIAEADTELVLG 250 Query: 208 PLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVG 267 P +EYSG F + G + V +F +F+ ++ ++K + Sbjct: 251 PATEYSGLLFVLTMAGSYVGNFVYALVFTDMFLWGWY-----PLSGFPGALLTVIKASIL 305 Query: 268 VLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 V + R RLD R +W +A + L Sbjct: 306 VFFSVFLRSVYGRYRLDQALRGSWKYIFPLAIASLFL 342 >UniRef50_B5IE93 NADH dehydrogenase superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IE93_9EURY Length = 321 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 7/302 (2%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVF 64 + + + L GI R AR+ NR GP V Q + D+ KLL +++ W+F Sbjct: 11 LVALYLFLAVVIGLLFMGIARKVTARIQNRVGPPVYQNFLDVGKLLAKKTNI--KHNWIF 68 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 P + +L LP+ L GDLI LLY+ AI FA+ +G+P Sbjct: 69 DFAPLFALAGVLLALAYLPMGG-YKMLSGEGDLILLLYIMAIPSLGFALGAGASGNPNAG 127 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 +G R L + E LL L + ++S + D + L I L ++ A Sbjct: 128 VGVMRALTLMLSYEMPFLLVLLSLMIFYNTASLSVLLDKQMSY-LWGIIALPISALAADL 186 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 A M + PFD+A A E+ GPL E+ G G++ + ++ +FV +F+ G Sbjct: 187 ALQGMMMEKPFDIAIAPHEIASGPLVEFGGKYLGMLMLFSAGSIVLETTLFVDLFLGGGI 246 Query: 245 METFTAGGLL---LALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAF 301 + G++ + ++ + V ++ R R++ + W + Sbjct: 247 VLNPATYGIIAYVVNYLVWFALIFVVWMIAVFINAVFPRFRIEQAFKFYWKWPTVIAILG 306 Query: 302 VS 303 ++ Sbjct: 307 LA 308 >UniRef50_B6YU34 NADH dehydrogenase subunit n=8 Tax=Thermococcaceae RepID=B6YU34_THEON Length = 309 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 6/293 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 L L + V + GI R AR+H R GP + Q D IK G++ G + Sbjct: 6 LKALFLLIYATFVGFMFMGIIRKVSARIHRRVGPPIYQPILDTIKFFGKKENI--THGLI 63 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + +G + +P+ + S L GDLI + +L I + + +G+P+ Sbjct: 64 YDFGIIYALGATVLALFFIPLGS-VSILRAYGDLILITFLLEIPMLGIMFAAMSSGNPYA 122 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQS-IPLVLALCAC 182 IGA R + + ++ L + A+ G+ + I S +PL+LA A Sbjct: 123 GIGAQRALLTMLAIQVPLGFAIIALAEFYGTFSTYEIVMAQQISGWSIIHLPLLLAAIAY 182 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 GK PFD+ A E+ GP+ E+ G G+++ ++ F +F+ Sbjct: 183 DIVLQAMFGKEPFDIMIAPGEISLGPMVEFGGKHMGILQIQHAIALFAETLFFSNIFLGG 242 Query: 243 GQMETF--TAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + F + +L I +VK + +L+ R +D + W Sbjct: 243 AVITAFASPILNTIASLAILLVKQIAVLLIAVFVSTIFPRFTIDQAAKFYWKW 295 >UniRef50_D2BJQ0 Hydrogenase, HycD subunit n=5 Tax=Dehalococcoides RepID=D2BJQ0_DEHSV Length = 316 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 159/308 (51%), Gaps = 3/308 (0%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VLY I + V+PL + + +A R GP +LQ Y + KL ++ V + + Sbjct: 9 VLYGFINTALALLVSPLFISLIKKVKAYAQGRVGPPLLQTYYQLYKLFKKERVYSYQTSF 68 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 + RLTPY+ + M+ + ++P+V + + P LG++I LYL ++RFF A+SGLD GS F Sbjct: 69 IIRLTPYLSLAFMMVASLSVPLVFIPAADPGLGNIILFLYLMVMSRFFMALSGLDAGSSF 128 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE L ++EP++++ A V +T++ ++ V + L+L + Sbjct: 129 GGMGSSREMTLAAIIEPVIIIVFGALAYVLQTTSLFDMFAQVRKSSFLSNPSLILTGISL 188 Query: 183 AFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 +E ++P D E E + E EYSG +++ +LKQ +++ + + + Sbjct: 189 FIILIVETSRIPVDNPETHLELTMIHEAMTLEYSGPDLALIELSHALKQTLLMGVLLNII 248 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFL 299 PWG AGG+ +A + ++K + + + +FE+ MA+ RL P + F F+F+ Sbjct: 249 APWGLASAPAAGGIAVAFLAFVIKGSLLAVGVGIFESLMAKFRLFRVPGLFMLAFFFSFI 308 Query: 300 AFVSLLAA 307 + A Sbjct: 309 TVLFKFLA 316 >UniRef50_D0Z5P3 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Styela plicata RepID=D0Z5P3_STYPL Length = 303 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 108/309 (34%), Gaps = 27/309 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + ++ LV+ + L R + R+GP G++Q D +KLL ++ G Sbjct: 13 YVNYIVFILVILLLVAFLVLYERKILGFIQERKGPNVVGIFGLVQTVYDGLKLLSKKDKG 72 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 P G+ F + P + + L LPV + ++ L + + G Sbjct: 73 P--MGFFFIVMPIYGMVLSLFQWVFLPVPFF--IMQLEYSIVFTFILSGLLVYVVLGCGW 128 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + + + IG+ R + E + + + + N S+ S S + Sbjct: 129 QSVNSYGVIGSMRSVAQMISYEVVFFFFVMMFMFSFKNFNWSDFLHF---EGFSGSNLKI 185 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + T E+ + PFDL E E EL G +EY G F ++ ++ +F Sbjct: 186 FFVFIWLVMTMAELNRSPFDLVEGESELVSGFNTEYMGYNFTLLFLSEYGNIWMMGMLFG 245 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F LV ++ V V + + RL+ +TW Sbjct: 246 LIFGGG--------------LVDMASLTLLYVSVTVIIRGFLPRLKFSDLINLTWKICLP 291 Query: 297 AFLAFVSLL 305 A F+ Sbjct: 292 AVFFFLLYF 300 >UniRef50_A5FW44 Formate hydrogenlyase subunit 4-like protein n=4 Tax=Proteobacteria RepID=A5FW44_ACICJ Length = 317 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 88/310 (28%), Positives = 137/310 (44%), Gaps = 7/310 (2%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 + Q A AP + G R+ GPGVLQ YRD+ KL + V P+ + W+ Sbjct: 7 ILQACQVAFTIAAAPFIQGCIVQFEERIQRGHGPGVLQPYRDLWKLFHKDIVVPETASWL 66 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGS-PLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 F +TP V M+T+ +PV+T PL +GD++ + + F ++GLDTGS + Sbjct: 67 FWVTPVVAFTCMMTVPILIPVLTNYPLPLSNMGDILGGGLILTLGSFMITLAGLDTGSAY 126 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP-LVLALCA 181 IG+SR A++G+L EP L+L A S + + P P + + A Sbjct: 127 GGIGSSRAAVIGILAEPTLILVFVGITLFARSMLPFVVNHLLVASPAVYLGPAHLFLVAA 186 Query: 182 CAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 +E +LP + E ++E + EY+G ++KW +KQ ++ +F V Sbjct: 187 FFILLTVETDRLPIH-SSTHIEVYMIEEARVLEYAGPLHALLKWASMMKQFILYTIFCNV 245 Query: 239 F-IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFA 297 +PW A G+L + IVK V+ I + ARLR F A Sbjct: 246 LTMPWFLSTRGLAPGVLGSAAGVIVKFVIVACAIVTVDTIQARLRFYRYQEPLAVSFLLA 305 Query: 298 FLAFVSLLAA 307 LA + Sbjct: 306 VLAIIGTQIG 315 >UniRef50_Q46G56 Ech hydrogenase subunit B n=3 Tax=Methanosarcina RepID=Q46G56_METBF Length = 287 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 126/307 (41%), Gaps = 33/307 (10%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 +L ++ + + L SGI R ARL R GP +LQ Y D+ KLL + ++ + S Sbjct: 3 DILTIILVLIGAPIIGCLASGIDRKITARLQGRVGPPLLQPYYDVKKLLSKDNMVVNPSQ 62 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 + + + + L + D + +++++ +A + G+ TGSP Sbjct: 63 NFYVVVYLAFIILSLFMLVF------------KQDFLMIIFVYTVASVALVVGGMSTGSP 110 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 + IG+SRE M + EP+L+L + G+ +S + D + L A Sbjct: 111 YARIGSSREIMAILSYEPVLILYALAIYLLTGTFKLSALLDASS----PLLMYTPLIFIA 166 Query: 182 CAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGV 238 I++ K PFD + QEL +G +EY G GF ++ + + + + + Sbjct: 167 MIVVLNIKLKKSPFDYSTSHHGHQELIKGMTTEYGGPGFATIEIAHFYEYVFLTGL---I 223 Query: 239 FIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 F+ W + + L++ + +N AR+ +++W Sbjct: 224 FLFWASTPVIGVLIGI-----------IAYLLVIVIDNITARVYWQWMLKLSWTILLVIS 272 Query: 299 LAFVSLL 305 L ++ L Sbjct: 273 LVNIAYL 279 >UniRef50_Q9B8G7 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Heterodoxus macropus RepID=Q9B8G7_9NEOP Length = 297 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 112/311 (36%), Gaps = 27/311 (8%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 M +L I +++ + + R +H R+GP GVLQ D +KL+ + Sbjct: 2 MLILQHFILVIMMLLTVAFFTLLERKILGYIHFRKGPNKVLLKGVLQPIVDAMKLITKDD 61 Query: 55 V-GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 ++ +++ ++P + + I LP+ + + L L + + + Sbjct: 62 SPIIYSNIFLYYISPMFSFIMSMIIWMILPL--QFIIFNWVNSFLILFMLLGMGVYSMFL 119 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG + S + +G+ R + E ++ + +I I Sbjct: 120 SGWSSNSKYAYLGSLRAVSQSISYEILMSMLFIALMMTTKGMSIYYILKFDPLVFFLFPF 179 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 A F E+ + PFDL+E E EL G EY G + ++ ++ + Sbjct: 180 F-----IAYLFIGLAELNRSPFDLSEGESELVAGYTVEYGGIMYTMIFLSENIMIMFFCY 234 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 M F + ++I+ ++ + ++ L + R+R D W Sbjct: 235 MGSLFFF-------------YINSTMSIIFSMMMIYLVCLIRGILPRIRYDHLMMFCWKI 281 Query: 294 FGFAFLAFVSL 304 + FV+L Sbjct: 282 MLPLMVIFVNL 292 >UniRef50_Q68RK6 NADH-ubiquinone oxidoreductase chain 1 n=54 Tax=Bilateria RepID=Q68RK6_DIUNO Length = 315 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 22/310 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 S L L L++F + + R + R+GP G LQ D +KL ++ Sbjct: 10 SYLIFLFLFLMVFMSVAFFTLLERKVLGYIQLRKGPNKFFLKGALQPMGDGLKLFFKEVN 69 Query: 56 GPDASGW-VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P + +F ++P + + + + P + + + LI + ++ + F + Sbjct: 70 YPSNMNFFIFMISPMLGLLISIFFWFIYPYIGMNYIMGF--GLIYMFCCSSLMVYIFLMV 127 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 + S ++ +G R + E +++ + + S N+++ Sbjct: 128 SWSSNSNYSVLGMIRFISQMISYEVSMMIIIMNLMFLINSFNLNDFYIYQ--MNSKFFFF 185 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 L L + EM + PFD +E E EL G E+S F + + + + + Sbjct: 186 LFLIFILLLISFMAEMNRSPFDFSEGESELVSGFNIEFSSMSFIFIFMSEYMSIMFMGML 245 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 +F L++ + +++ + ++ + R R D + W Sbjct: 246 LCEMFFG-----------LMMNKFYLNIFILIFMFMVIWLRGFLPRFRYDKLMYLIWKLI 294 Query: 295 GFAFLAFVSL 304 L Sbjct: 295 LPLSLFLFMF 304 >UniRef50_Q24ST5 Formate hydrogenlyase subunit 4 n=3 Tax=Desulfitobacterium RepID=Q24ST5_DESHY Length = 328 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 10/296 (3%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + + ++ L+ APLL G + +A R+GP + Q YRD+ K + ++ V + + W Sbjct: 12 IFFSMLHLLIFLLAAPLLQGWIKKVKAFWQMRQGPSLFQPYRDLWKYMRKEEVVSEHASW 71 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +F +TP +++G + +P +P+ +G L L +ARFF A++GLD G F Sbjct: 72 IFLVTPSLVLGSTILAGCVVPGPWGWAPIHSMGSLFWLAASLGLARFFLALAGLDAGGTF 131 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 +G+SRE + LVEP +L L V A + +T++ I+ + + ++ P +LAL A Sbjct: 132 GGMGSSREVFVAALVEPGFILSLVVLALMTETTSLMGISAALQGLSIFET-PRILALFAL 190 Query: 183 AFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 E+G++P D + E + EG L +YSG G + W LKQL++LQ+ + Sbjct: 191 FVIVIAELGRIPIDNPDTHLELTMIHEGMLLDYSGPSLGFLTWAEQLKQLLLLQLLAFLI 250 Query: 240 IPW------GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 +P G LL ++ I L + A E+ ++RL P + Sbjct: 251 LPVNIQVMNSWSGGIPFGILLSHGILQIGFLALLGTFFATLESINVKVRLFRIPNV 306 >UniRef50_D1PPE2 Putative Ech hydrogenase, subunit EchB n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPE2_9FIRM Length = 287 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 29/299 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M V+ L L+ V LL G+ R AR+ R+GP ++Q + D+ KL +Q + ++ Sbjct: 2 MPVVSVLAYLLLAPLVGALLDGLDRRVSARMQARQGPPMMQPFYDLKKLFSKQMIAVNSV 61 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 + L+ + + V GS L D++ L++ + A F ++ S Sbjct: 62 QMLLNLSYLIFLAVA------------GSMLFAGADILMCLFILSTADMFLVMAASSDSS 109 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 PF+ +GA RE + + EP+ LL GS ++ +I + + + L Sbjct: 110 PFSTLGAGREMIQMMAYEPLTLLMAVGFYLATGSFHVGDIIRMSHSA----VLTMPGFLL 165 Query: 181 ACAFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 F T I++ K PFDL+ A QE+ +G +E +G VM + +++L + Sbjct: 166 GFMFITAIKLRKSPFDLSTSHHAHQEMVKGITTEMAGPTLAVMNIAEYYEMVLMLGIVAL 225 Query: 238 VFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 F+ + IAIV +V L+ L++N AR++ W Sbjct: 226 FFL----------NEHWWSWPIAIVACLVVYLLEILWDNVAARVKWRTLLDGCWVVTLL 274 >UniRef50_Q9UYN3 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN3_PYRAB Length = 299 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 8/305 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + + ++ ++ + P L GI R +AR+ +RRGP ++Q + D++KLL SV P W Sbjct: 2 IAFTILALGIVLFLPPYLDGIARKVKARIQHRRGPPLMQTWYDLVKLLSIPSVIP-TRNW 60 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 +F+L PY+ + A LP PL +LI Y + F ++G + F Sbjct: 61 LFKLYPYLAFASAIVAALLLPYGG-VIPLKLGYNLIVFFYAILMVSVFLMLAGFSVQNAF 119 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + +G++RE ML + VEP+L + + A AGS +I I L + L++A Sbjct: 120 SHLGSAREMMLILTVEPLLAIVYGILAYNAGSLDIGEII-----SNLHLTPSLIVAYAIL 174 Query: 183 AFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPW 242 A++ ++E G +PFD+AEAE E+ GPL+EYSG G+ + I +K+ +L FV + + Sbjct: 175 AYSMYVESGFVPFDVAEAETEVIGGPLAEYSGRLLGIFYYAIHIKRFALLWFFVSLVV-L 233 Query: 243 GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302 + T LLAL++ ++ + VIA E + ARLR+D ++ F + + F Sbjct: 234 PLVPITTQAKALLALLLQLLLTLALYPVIASLEATNARLRIDQVAKVNVRLFFASIIVFA 293 Query: 303 SLLAA 307 Sbjct: 294 MSFLG 298 >UniRef50_Q64LH8 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Paratomella rubra RepID=Q64LH8_9TURB Length = 313 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 107/311 (34%), Gaps = 17/311 (5%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP-----GVLQEYRDIIKLLGRQSV 55 + +L I + + + + R + R+GP G LQ D +KL ++ V Sbjct: 7 LYILESFIMVVPILLSVAFFTLLERKLLSYSQLRKGPNVVGSGFLQPIADGLKLFIKEVV 66 Query: 56 GPDAS-GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAIS 114 P +S +++ L+P + + L + + L + + + FFF S Sbjct: 67 VPLSSQNFLYYLSPLFVFFLSLFLWSIFFFSK---LFFVYNSFFFFLSVSSXSVFFFLSS 123 Query: 115 GLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIP 174 G + S F +G+ R A + E ++ L + + + I D ++ + Sbjct: 124 GWSSNSFFAILGSIRAAAQMISYEVVMSFILVFFFLLXKTNSFYFIMDFSLYFEN--LLF 181 Query: 175 LVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQM 234 E + PFDL E E EL G EYS F L++ + Sbjct: 182 FFFFFFFWMVVILAETNRSPFDLTEGESELVSGFNVEYSAGPFAFFFLAEYGMILLMSSL 241 Query: 235 FVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGF 294 VF + L V I ++ + + R R D + W G Sbjct: 242 SGMVFFSG------LVFFISLFYVKLIFFIIFVSFFLFXVRCTFPRKRYDFLMDMMWVGI 295 Query: 295 GFAFLAFVSLL 305 + ++ L Sbjct: 296 LPFNIILLTFL 306 >UniRef50_Q9T9H0 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Halocynthia roretzi RepID=Q9T9H0_HALRO Length = 298 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 96/286 (33%), Gaps = 23/286 (8%) Query: 24 TRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLT 77 R R GP G++Q D +KLL ++ + FR+ P V + + Sbjct: 23 ERKIFGLTQVRLGPNVVGASGLVQTIGDGVKLLLKRFFLFSKLNFFFRVCPMVGFILSIV 82 Query: 78 IATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLV 137 LP GS ++ + + + +G + S F +G+ R + Sbjct: 83 HWLVLPFP--GSLWHMGWSVLFTFAVSGVLVYVVLWAGWGSDSVFGLLGSVRGVSQMISY 140 Query: 138 EPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDL 197 E + + + + + S + + + + + L + E+ + PFDL Sbjct: 141 EVVFMFFVLLFSIEVWSYWLGGVCEGTGVFGIYFKF---LLVLVWGVIVLAELNRTPFDL 197 Query: 198 AEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLAL 257 E E EL G EY+G GF ++ + + + F + L Sbjct: 198 VEGESELVSGFNVEYAGFGFTLLFLAEYMNIWFISFLSTIFFFGFW------------DL 245 Query: 258 VIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVS 303 ++ ++ V + L + R + + W F+ Sbjct: 246 FWYLLIGIIFVSLCLLVRCVLPRYKFTQLIDLMWKVLLPCISFFLM 291 >UniRef50_A8ABL9 NADH dehydrogenase (Quinone) n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABL9_IGNH4 Length = 355 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 117/343 (34%), Gaps = 42/343 (12%) Query: 1 MSVLYPLIQALVLFAVAPLLSG----ITRVARARLHNRRGP------GVLQEYRDIIKLL 50 + ++ L+ L+ F A LL + R ++ R GP G+LQ D +K L Sbjct: 6 LLIIIALVSVLLAFGYAGLLDLVTIYMERKMWGKIMQRYGPTHVGYAGLLQLIADFLKYL 65 Query: 51 GRQSVGPDASGWVFRLT-PYVMVGVMLTIATALPVVTVGSP------------------- 90 ++ P +F P +++ ++ +P+ V Sbjct: 66 SKELFAPRRPNKLFYYGLPLLLIAIISIPLVLIPLDYVALSGLEGLLKLAGINVNLSDYA 125 Query: 91 -------LPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLL 143 L L+ + + A+ + + + + A+GA R +L V E L+ Sbjct: 126 ASKLLDELAPGVGLLGYVAVVAVTMPLMYMLSWNQANKYGALGAFRTVLLLVTYEVPFLI 185 Query: 144 GLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQE 203 + A + G + + D ++ +A E + PFD EAEQE Sbjct: 186 AIAAVAALGG-LSFYGVVDFQKS--AWLALLNPIAALVLFITLLAESERPPFDHPEAEQE 242 Query: 204 LQEGPLSEYSGSGFGVMK-WGISLKQLVVLQMFVGVFIPWGQMETFTAGGL-LLALVIAI 261 + G EY F ++ + K L + + + L + Sbjct: 243 IVHGWNVEYGAGEFILLYGLYLYTKALYADALITLFLLGGWLGPALPGLPVELTNAIWFT 302 Query: 262 VKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 VK+V + L ++AR R+D + W + + + Sbjct: 303 VKMVAVFALFILVRAALARPRVDQILELGWTKILALSIVALFI 345 >UniRef50_B2A053 Respiratory-chain NADH dehydrogenase subunit 1 n=11 Tax=cellular organisms RepID=B2A053_OPITP Length = 307 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 117/306 (38%), Gaps = 33/306 (10%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 + ++ + V LL+G+ R AR+ +R+GP + Q + D++KL ++ + S Sbjct: 5 IRLVLYLVAAPVVGGLLTGLDRRISARMQSRQGPPLAQPFYDVMKLWRKERIVVRKSQNF 64 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + L V+ G+ DL+ ++ +A FF + SP++ Sbjct: 65 ------------FILFFLLLVIFTGALFFAGSDLLLTIFALTLAAIFFVLGAYKVSSPYS 112 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 +GA RE + + EPM+LL VAGS + I P L Sbjct: 113 FVGAQRELIQMMAYEPMVLLTAIGMYMVAGSFYVHEI----ARHPTLLVTTLPGVFAGFL 168 Query: 184 FATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 FA I+ K PFDL+ A QEL G +E+SG +++ + + +L F Sbjct: 169 FALEIKFRKSPFDLSSSHHAHQELVRGITTEFSGRALALIEIAHWYENVFLLGWVYLFFA 228 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 + A + + L +N ARL+ R W Sbjct: 229 AIPAVGVAVAFAVFGFV--------------ILVDNVFARLKWQTALRSAWIAAFVLGFG 274 Query: 301 FVSLLA 306 + +L+ Sbjct: 275 NILVLS 280 >UniRef50_P34847 NADH-ubiquinone oxidoreductase chain 1 n=12 Tax=Arthropoda RepID=NU1M_APILI Length = 305 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 114/309 (36%), Gaps = 22/309 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ LI +++ L+ + R + +R+GP G+ Q + D +KLL ++ Sbjct: 4 LINLLILMIMVLISVAFLTLLERKILGYIQDRKGPNKIMLFGMFQPFSDALKLLSKEWFF 63 Query: 57 PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGL 116 + S +F +P +M + L + P + ++ +L + ++ + G Sbjct: 64 FNYSN-LFIYSPMLMFFLSLVMWILYPWFGFMYYIEF--SILFMLLVLGLSVYPVLFVGW 120 Query: 117 DTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLV 176 + + +G+ R + E L ++ + + S + + +I L Sbjct: 121 ISNCNYAILGSMRLVSTMISFEINLFFLVFSLMMMV--ESFSFNEFFFFQNNIKFAILLY 178 Query: 177 LALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFV 236 + IE+ + PFDL E E EL G EY S F ++ + + + + Sbjct: 179 PLYLMMFTSMLIELNRTPFDLIEGESELVSGFNIEYHSSMFVLIFLSEYMNIMFMSVILS 238 Query: 237 GVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 +F + + I+ + + +I + R+R D + W Sbjct: 239 LMFYGFKYWS-----------IKFILIYLFHICLIIWIRGILPRIRYDKLMNMCWTEMLM 287 Query: 297 AFLAFVSLL 305 + ++ L Sbjct: 288 LVMIYLMYL 296 >UniRef50_Q2HJL2 NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Philopteridae RepID=Q2HJL2_9NEOP Length = 299 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 12/240 (5%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 ++ + L++ S R + R+GP GVLQ + D +KL+ + Sbjct: 8 LIEVVEVLLMVLLSVAFFSLYERKLMGLVQGRKGPNKVGVGGVLQPFADAMKLISKNEYA 67 Query: 57 PDAS-GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 P +++ ++P + + L PV + + ++ LL LF+++ + F +SG Sbjct: 68 PSKVIKFIYAVSPMISFFISLVFWIMYPV--IWNFFSLNLSIVFLLVLFSVSVYGFILSG 125 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S + IG +R + E L L + ++S I + + L Sbjct: 126 WFSSSKYANIGCARALAQSISYEVGLTLSIIFFCLFFSCISLSEILEVQEFFFFFPFSFL 185 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + + F E + PFDLAE E EL++G + ++ G +L L V + Sbjct: 186 FVFMWSIFF---AETNRPPFDLAEGESELKKGFCVKKGEMSNPLIFLGENLSVLFVSILL 242 >UniRef50_A1RV03 Respiratory-chain NADH dehydrogenase, subunit 1 n=5 Tax=Thermoproteaceae RepID=A1RV03_PYRIL Length = 350 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 118/322 (36%), Gaps = 23/322 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------GVLQEYRDIIKLLGRQS 54 + + +I + + + R A AR+ R GP G LQ D K + + Sbjct: 19 LWFFIIMFIASSVILLTVVWFERKAAARVQMRVGPYHVSPWLGGYLQLLADAFKFIISEP 78 Query: 55 VGPD-ASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLP----QLGDLITLLYLFAIARF 109 + P A +F P + + + + LP+ + L+ L + + Sbjct: 79 IIPKGAHKILFVWGPAIFITLAFGASLLLPLTPELRLIKDVNLLPYGLVFSLVILLLVSI 138 Query: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPL 169 I G + F IGA REA+L E L+L A + G+ N I + L Sbjct: 139 SVVIIGWSVNNKFAYIGAVREALLVTAYEIPLILSFLAMAILYGTLNPIEIVNKQSL--L 196 Query: 170 SQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKW-GISLKQ 228 +I LA AT + + PF++A+ E ++ GP S+Y G + G Sbjct: 197 VGAILNPLAFLVFIIATAMATARFPFEIADYEGDVATGPYSDYGGIFLVLSFAGGTYYAT 256 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGL-------LLALVIAIVKLVVGVLVIALFENSMARL 281 +F+ + ++ G L+ V +K+ + + + A +M L Sbjct: 257 FSFSFFATLLFLGGWALPSYVVGPWPQDLLGHLVLAVWVFLKVTILMFLFAFLRAAMPVL 316 Query: 282 RLDITPRITWAGFGFAFLAFVS 303 RLD T + W G V Sbjct: 317 RLDHTLILGWRGLLILGFIAVV 338 >UniRef50_B9MR80 Respiratory-chain NADH dehydrogenase subunit 1 n=8 Tax=Bacteria RepID=B9MR80_ANATD Length = 286 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 126/307 (41%), Gaps = 34/307 (11%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWV 63 L L ++ + LL+GI R AR+ NR GP +LQ + D+ KL ++++ + + Sbjct: 5 LIVLASVVLSPIIGGLLTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSNTQIL 64 Query: 64 FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFT 123 + V V + + + + + + + T SP++ Sbjct: 65 YAFLFLVFNIVAVVMFLLKMDLLLILFILAFA------------TTALILGAMATNSPYS 112 Query: 124 AIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACA 183 IGA RE + + EP+L+ + V GS NI +I + L A + Sbjct: 113 RIGAHRELISVLAYEPVLIAMIVAIYFVTGSFNIQDILK----HNSFLILDLPFIFIAFS 168 Query: 184 FATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 + I+ K PFDL+ QEL +G +E++G G+++ G + + Sbjct: 169 YVLTIKFRKSPFDLSTSHHGHQELVKGITTEFAGPVLGLIELGHWYELV----------- 217 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG-FGFAFL 299 + F + +AI +++ + + +N ARL I ++TW+ FGFA + Sbjct: 218 ---LLLLFVWLFFAKNIFVAIAAILICYFLEIVIDNISARLTWKIMLQLTWSVAFGFALV 274 Query: 300 AFVSLLA 306 + + Sbjct: 275 NLIWVYI 281 >UniRef50_A3QRI2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Microcotyle sebastis RepID=A3QRI2_9PLAT Length = 305 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 98/306 (32%), Gaps = 30/306 (9%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 + L +I ++ F + + R R GP G+LQ + D IKLL + V Sbjct: 9 TFLVYVIVTVIFFVLVAFFVLLERKILGVCQARLGPQKVSFLGILQSFADFIKLLAKLGV 68 Query: 56 GPDASGWV-----FRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 + + F + + T + ++ S L+ +++ + Sbjct: 69 SFGSYKGLKYRGLFYWLGVIYFLLGATTFISFFILGNVSSWVVSNYTCWLIVFSSLSGYG 128 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 F + G + S ++ GA R + + E +L+ + G + S I + Sbjct: 129 FIMCGWGSNSKYSLYGAIRASFSSISFEGVLMCIVLSVGLYYGCYSFSVINNYEGS---- 184 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 SI + E + PFD +E+E +L G ++Y G+ F ++ + Sbjct: 185 LSIGALTLYICSVIGVMSECNRSPFDFSESESDLVSGFNTDYYGASFAILFASEYSIMIF 244 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 F+ ++ + ++ R R D Sbjct: 245 FSWFLGYFFMG---------------SLLGLGFFFFHSFILIFVRACFPRFRYDYYVNFV 289 Query: 291 WAGFGF 296 W Sbjct: 290 WKNLFI 295 >UniRef50_A4XJP3 Ech hydrogenase subunit B n=2 Tax=cellular organisms RepID=A4XJP3_CALS8 Length = 286 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 34/308 (11%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 + L+ ++ + +L+GI R AR+ NR GP +LQ + D+ KL ++++ ++ Sbjct: 4 IALVLLTIIIAPIIGGILTGIDRKITARMQNRFGPPILQPFYDLFKLFSKETIVVSSTQI 63 Query: 63 VFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPF 122 ++ V V L + DL+ +L++ A A + + T SP+ Sbjct: 64 LYAFLFLVFNMVALVMFVL------------KMDLLLILFVLAFAVTALILGAMSTNSPY 111 Query: 123 TAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCAC 182 + IGA RE + + EP+L+ + V GS I ++ L A Sbjct: 112 SRIGAHRELISVLAYEPVLIAMIIGIYFVTGSFKIDDVIK----HNNFLIFELPFIFIAF 167 Query: 183 AFATFIEMGKLPFDLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVF 239 + I++ K PFDL+ A QE+ +G +E++G G+++ G + + Sbjct: 168 TYVLTIKLRKSPFDLSTSHHAHQEIVKGITTEFAGPILGLIELGHWYELV---------- 217 Query: 240 IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW-AGFGFAF 298 + F +V+AI+ +++G + L +N ARL I R+TW G A Sbjct: 218 ----LLFLFIGLFFAKNIVVAIIAMLLGYFLEILIDNISARLTWKIMLRLTWSMALGLAL 273 Query: 299 LAFVSLLA 306 + + + Sbjct: 274 VNLIWVYI 281 >UniRef50_B6YTW7 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 n=2 Tax=Thermococcus RepID=B6YTW7_THEON Length = 307 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 10/305 (3%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + + + +++ + PLL GI+R +A + R+GP V Q Y D+ LL + + P Sbjct: 5 KIAFAALSLMIIILLPPLLDGISRKIKATVQERQGPPVFQTYYDLSSLLSMEPILP-TDR 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 F + PYV ++ A LP P+ GD+ LY+ AI ++G + Sbjct: 64 LGFLIAPYVAFASAVSAALLLPFG-NFVPVAFTGDIFVFLYVLAIFSISMMMAGFLVNNT 122 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 ++ GA+RE ML + VEP+L + + + A S ++S I LS + +VLA Sbjct: 123 YSNAGANREMMLILSVEPILGIAIGILALKTHSLSVSGI-----PLNLSLTPSVVLAFIF 177 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 A+A + E +PFD+AEAE E+ EGPL EYSG G+ KW + +K++ ++ +F + Sbjct: 178 LAYAVYTECAFIPFDIAEAETEILEGPLVEYSGKLLGIFKWAMLIKRVALIWLFASFIVI 237 Query: 242 W---GQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAF 298 G ++ T G + L +V LVV ++ A+ E++ AR+++ R F Sbjct: 238 PVMKGFVDITTPYGGAVTLAAQLVLLVVFYVMSAIIESTTARMKVIQAIRQNTVIFLAGI 297 Query: 299 LAFVS 303 +A V Sbjct: 298 VALVI 302 >UniRef50_Q0W3I4 Ech hydrogenase, subunit B n=2 Tax=Euryarchaeota RepID=Q0W3I4_UNCMA Length = 306 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 22/306 (7%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + P++ ++ + LL GI R ARL NRRGP ++Q + D+ KL G++ + + Sbjct: 16 TYGLPVLLLILSPIIGGLLMGIDRKLTARLQNRRGPPIVQPFYDVFKLFGKEDNVMNKAY 75 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 VF L V + L + DL+ + ++F ++ F ++G S Sbjct: 76 LVFGLAYQTTVVLSLALLLF------------EYDLLVIAFVFGLSFIFLVLAGYSVRSQ 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCA 181 F+ IG++RE + + EP+LLL +++ V GS + I L + L Sbjct: 124 FSYIGSNRELLQMMTYEPILLLVVFLIRLVTGSFEVEAIYKVEPLLYTLPLALLAIFLI- 182 Query: 182 CAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIP 241 I+ K P+D++ A QE+ +GP++E++G G+++ + +L F+ Sbjct: 183 ----LPIKFRKSPYDISSAHQEIAQGPMTEFAGKYLGLIESAHFFEMFFMLWFIGLFFV- 237 Query: 242 WGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG-FGFAFLA 300 + + ++ + + + + +N+ ARLR+D + + L Sbjct: 238 ---HDLVIGAITIPGWIMRLGLMFFAYIFSIVVDNATARLRVDQMLKQVYIIGLILIVLN 294 Query: 301 FVSLLA 306 V +L Sbjct: 295 LVYILI 300 >UniRef50_A0LSU4 Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU4_ACIC1 Length = 320 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 149/290 (51%), Gaps = 6/290 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 VL ++Q + AP LSG ARL RRGP +LQ Y DI+K ++S+ P + W Sbjct: 8 VLLQVLQVGTVALAAPGLSGFIARLEARLQGRRGPRILQPYYDIVKFFRKESLAPLEASW 67 Query: 63 VFRLTPYVMVGVMLTIATALPVV-TVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F P+V LTI +PV+ + G PL +GD++ +L A+A F A++ +TGSP Sbjct: 68 IFLAAPFVAFVCYLTIPLLIPVLTSYGLPLGYMGDILGGGFLLALASFAVALAAAETGSP 127 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW-PLSQSIPLVLALC 180 + +G+SR G + EP++L ++ A + + + TV +LA Sbjct: 128 YAQLGSSRSKTFGAITEPVVLFVVFTVALLTSTDLPYALAATVRQSAGQIVRPAHLLAAA 187 Query: 181 ACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A E G++P + E ++E E+SG +++WG ++KQ ++ +F+ Sbjct: 188 AFFLVILYETGRIPIETHSGTNEFGMIEEARSFEHSGPYLAMLRWGAAMKQFILYIIFLN 247 Query: 238 VFI-PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDIT 286 VF+ PWG + ++LA++ + K + + +A+ ++S A+LRL Sbjct: 248 VFVAPWGLASDGSLAAVILAVLALLGKAALVGVGVAVIDDSFAKLRLFKI 297 >UniRef50_A2BJ97 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ97_HYPBU Length = 262 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 5/256 (1%) Query: 50 LGRQSVGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIAR 108 + ++ + P + F P + + + T +P ++ L ++ Sbjct: 1 MFQEIIVPFETERLAFAAAPILAFTIAVLPLTVIPGGPGVYGFTSPYSMLIAYALLSLTS 60 Query: 109 FFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWP 168 + G + FT IGA RE + + E +LL + A + G+ +I+ Sbjct: 61 IVILVMGWAASNKFTLIGAGREILTAIAGEVVLLASILPTALMYGTLDINEAVRAQMETG 120 Query: 169 LSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQ 228 + + +A A + ++PFDL EQE+ GP +EYSG + + K Sbjct: 121 IIGLVANPVAALLYFLAAMLITDRIPFDLVLGEQEIVNGPYTEYSGFLYVLSMALDYAKL 180 Query: 229 LVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPR 288 ++ +F +F+ T G + + +K VV +L+ + R+RLD Sbjct: 181 YALMMLFTDLFLGGWAPFT----GEITGSLAVFLKTVVVMLIAVFLRSVYGRMRLDKMVS 236 Query: 289 ITWAGFGFAFLAFVSL 304 + W F A + L Sbjct: 237 MFWGRFMPLAFAALIL 252 >UniRef50_Q9T9L2 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dicyema misakiense RepID=Q9T9L2_9METZ Length = 271 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 98/303 (32%), Gaps = 43/303 (14%) Query: 11 LVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGWVF 64 + + L+ + R +H R GP GVLQ D +KL + + Sbjct: 1 MFMLLAVAFLTLLERKVMGYIHGRVGPNKILLIGVLQPIVDGVKLFLKSHMIS------- 53 Query: 65 RLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTA 124 V V + ++ + L+ L + +++ + I+ + S + Sbjct: 54 -----VKVLPSVLSLIVPLLLLCVLDVNSSYMLLMYLAVLSLSVWPLLIASWSSYSSYPV 108 Query: 125 IGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAF 184 + + R + E +L L ++ S + + S I V + Sbjct: 109 LASLRIVAQSISYEVVLYLIFIPLVVLSVSWS-------GFAPTYSCGIYCVSFVFLGVI 161 Query: 185 ATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQ 244 EM + PFD AE E EL G +E+S F ++ L LV+ + V Sbjct: 162 VGLSEMHRTPFDFAEGESELVSGYNTEFSSVSFTLLFLAEYLALLVMCVLLSVVMFACWW 221 Query: 245 METFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSL 304 VV + V RLR D ++ W L ++ Sbjct: 222 WS------------------VVFMWVCLSVRFVYVRLRYDQLMQLLWKNLLPTCLCLLAP 263 Query: 305 LAA 307 L + Sbjct: 264 LFS 266 >UniRef50_B5I9E4 Formate hydrogenlyase membrane subunit subunit HyfD n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E4_9EURY Length = 319 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 7/310 (2%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGW 62 ++ L+Q L + A++PL+ GI + A+ +R+G + Q Y D+ K ++ V P+ +G Sbjct: 5 IVAGLVQVLTVLALSPLMVGILKKWEAKFESRKGISIFQPYYDLAKSFKKEIVVPEDAGS 64 Query: 63 VFRLTPYVMVGVMLTIATALP-VVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 +F L P + L + +P V S L D + +LF A FF I TGS Sbjct: 65 LFILAPMLSFTAYLILPWVVPIVFGSPSWFAPLVDFLGGAFLFGFASFFSVIGTEKTGSY 124 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC- 180 +T IGA+R G EP+L+ + A + G+ N +T+ + P + L Sbjct: 125 YTGIGATRGVTFGAFAEPVLITVFFGVALITGTNNPFLTNETLRNNLSWMLSPTHILLIT 184 Query: 181 ACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVG 237 A + GKLP + + E + +G EYSG + + WG +KQ ++ +F+ Sbjct: 185 AFFLLLLFDTGKLPIE-SHGMGELGMIGQGMGLEYSGPLYALKSWGSYMKQFILFSVFIN 243 Query: 238 VF-IPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 VF +PW A +L + + VK++V + I L E S+A++RL + Sbjct: 244 VFAMPWFIPLQVNALTILYGIALLFVKMLVVIFAIVLVEISVAKIRLFKIIDYLTFSYLT 303 Query: 297 AFLAFVSLLA 306 A LA +S Sbjct: 304 ALLAVISFFL 313 >UniRef50_P24887 NADH-ubiquinone oxidoreductase chain 1 n=9 Tax=Rhabditida RepID=NU1M_CAEEL Length = 291 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 105/313 (33%), Gaps = 36/313 (11%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + +L ++ + + ++ R NR GP G+ Q D +KLL ++ Sbjct: 3 LVLLMVILMMIFIVQSIAFITLYERHLLGSSQNRLGPTKVTFMGLAQALLDGVKLLKKEQ 62 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P ++S F L P + VM LP + ++ L L + + I Sbjct: 63 MTPLNSSEVSFLLVPGISFVVMYLEWFTLPYFFDF--ISFEYSVLFFLCLIGFSVYTTLI 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG+ + S + IGA R + + E L + N + ++ Sbjct: 121 SGIVSKSKYGMIGAIRASSQSISYEIAFSLYVLCIIIHNNVFNFVS----------KFNL 170 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L++ E+ + PFD +E E+EL G E++ F ++ + Sbjct: 171 SLLIIYIPFLIMVIAELNRAPFDFSEGERELVRGFNVEFARVAFVLLFLSEYGSLIFFSV 230 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F +I ++ +S R R D+ + W Sbjct: 231 LSSAMFFK-----------------FSIFMAFSIFSLLIFIRSSYPRYRYDLMMSLFWFK 273 Query: 294 FGFAFLAFVSLLA 306 L + A Sbjct: 274 LLPISLIMLCFYA 286 >UniRef50_Q3JDU8 Respiratory-chain NADH dehydrogenase, subunit 1 n=4 Tax=Proteobacteria RepID=Q3JDU8_NITOC Length = 310 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 89/291 (30%), Gaps = 15/291 (5%) Query: 6 PLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFR 65 L L A L + + R GP + ++L W++ Sbjct: 7 VLATVAALLAGVGLTAWLEPKWLGANGER-GPASPVKIAADVRL-------TQPDPWLYY 58 Query: 66 LTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAI 125 P + + +P L + + A+ G +P + Sbjct: 59 AGPVIACMGVSWAMVCIPFSPSLVGNDVNIGLFYFIVVVDFVVLGIALGGWGANTPDSVE 118 Query: 126 GASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFA 185 R + L L + +A S + +I + + L IP + + Sbjct: 119 SCYRAIAQLIAYVIPLGLAIIGPIMMARSLSTVHIVEAQANAQLWYLIPQPIGFILYVIS 178 Query: 186 TFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQM 245 +++ + PF A+ + G LS + G + + +S VV M +F+ Sbjct: 179 GLMQVYRAPFLEPFADP-IGRGVLSVFGGWKGLLWRLALSGVLFVVAAMGAVIFLGGYS- 236 Query: 246 ETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGF 296 G L V ++K V ++++ + L + ++W Sbjct: 237 -----GPFLPGPVWMVIKTVGLMVLMIWLGRQVRLLSVAEMLSLSWKVLIP 282 >UniRef50_P24875 NADH-ubiquinone oxidoreductase chain 1 n=42 Tax=Chromadorea RepID=NU1M_ASCSU Length = 290 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 36/313 (11%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQS 54 + ++ ++ + + ++ R R GP G LQ D +KLL ++ Sbjct: 3 LMLVQVILIMIFVIQSIAFVTLYERHLLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQ 62 Query: 55 VGP-DASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAI 113 + P ++S F L P + VM LP + ++ L L + + + Sbjct: 63 MTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDF--MTFEYSILFFLCLIGFSVYTTLV 120 Query: 114 SGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSI 173 SG+ + S + +GA R + V E L L + ++ Sbjct: 121 SGMVSKSKYGMVGAIRASSQSVSYEIAFSLYLLAIVMHINMF----------CFFSFFNL 170 Query: 174 PLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQ 233 L + F E+ + PFD AE E EL G EYS F ++ G L Sbjct: 171 SLFIVYLPFLFMVLAELNRAPFDFAEGESELVSGYNVEYSSVAFVLLFLGEYGALLFFST 230 Query: 234 MFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAG 293 + +F + V + ++ +S R R D+ W Sbjct: 231 LTSVLFFG-----------------FSYVVIYCMFTILVFVRSSYPRFRYDLMMYFFWFK 273 Query: 294 FGFAFLAFVSLLA 306 L F+ Sbjct: 274 LLPVSLIFLGYFV 286 >UniRef50_A3DMA3 Respiratory-chain NADH dehydrogenase, subunit 1 n=2 Tax=Desulfurococcaceae RepID=A3DMA3_STAMF Length = 330 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 21/302 (6%) Query: 9 QALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGPDASGW 62 L + + I R R+ RRGP G+LQ + D +KLL ++ V S Sbjct: 18 GLLFIIIMIIFTQWIYRKVTGRVQYRRGPTYVGPFGLLQPFADFMKLLLKEDVVSRYSA- 76 Query: 63 VFRLTPYV--MVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 ++ P + +GV A L P+ D+I YL GL T + Sbjct: 77 --KIAPVIVAALGVGAITALTLMTPLAYDPVHAPFDIIVFFYLALWTSLSIMFLGLATPN 134 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNIS---------NITDTVYHWPLSQ 171 P+T++G R L V EP + V +A + S I+ ++ + Sbjct: 135 PYTSLGVGRYMALLVSAEPAYVSSFLVPVIIASKIDPSIEYSLYGSSLISYQLWTSNVFS 194 Query: 172 SIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVV 231 I +++A A A + PFD EAE E+ G +EY G + + + +++V+ Sbjct: 195 FIAMLIAAIAGFLAMMGILEIKPFDFPEAEGEIYWGVFTEYGGPRLALAFFILFAERIVI 254 Query: 232 LQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITW 291 ++V +F+ + L L++ K +V +++++ +N M R R W Sbjct: 255 PIIYVLLFLGGSW-PIDISTNYLGGLLVIFAKFIVVFILLSVIDNVMPRFTPAQGVRFLW 313 Query: 292 AG 293 Sbjct: 314 KY 315 >UniRef50_B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1 n=12 Tax=Bacteria RepID=B1I3Q1_DESAP Length = 290 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 33/293 (11%) Query: 16 VAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVM 75 V L G+ R AR+ R GP V Q++ D +KL G+ P+ + V+ ++ V Sbjct: 19 VGGFLRGVDRRITARMQGRIGPPVRQQFYDFLKLWGKAPSVPNKASVVWVWGYLLLTMVT 78 Query: 76 LTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGV 135 + + L DL+ + ++ A A A SP+ IGA RE + + Sbjct: 79 VFM------------LFAGQDLLIIFFVLAFAAACLAFGAYSVRSPYAHIGAHRELLQML 126 Query: 136 LVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPF 195 EP+LLL + G+ +S + + + L LA A A I++ K PF Sbjct: 127 SYEPILLLAVVAIFLQTGTFMVSGVLEYDQ----PLLLTLPLAFAAVLIALGIKLRKSPF 182 Query: 196 DLA---EAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGG 252 D++ A QEL G +EYSG V++ + +++L Sbjct: 183 DISASEHAHQELVRGVYTEYSGRTLAVIELAHWYELVLILAFVALF-------------- 228 Query: 253 LLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLL 305 L + ++ + + + +N ARLR I+W L + L+ Sbjct: 229 WAQPLWVGVLLALGAYFLEFVVDNIAARLRWTWMLSISWGIGVGLVLLNIVLI 281 >UniRef50_B8IYV8 Respiratory-chain NADH dehydrogenase, subunit 1 n=7 Tax=Deltaproteobacteria RepID=B8IYV8_DESDA Length = 313 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 84/313 (26%), Positives = 135/313 (43%), Gaps = 20/313 (6%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASG 61 + +Q + +APLL GI +A+ R G +LQ Y D+ +L+ + V + Sbjct: 4 DIAVYFVQFALALVLAPLLPGIINRVKAKFAGRHGKPLLQTYYDLARLMRKGEVISRTTT 63 Query: 62 WVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSP 121 WVF P V + L LP+ SPL GD I YL + RF +S LDTGS Sbjct: 64 WVFACGPAVALATALCAIALLPLGGAASPLAFGGDFILAAYLLGMGRFAIMLSALDTGSA 123 Query: 122 FTAIGASREAMLGVLVEPMLLLGLWVAAQVA--------GSTNISNITDTVYHWPLSQSI 173 F +GASREA L EP+ L L V V + ++S++ + Sbjct: 124 FEGMGASREATFAALAEPLFFLALLVLTSVTLDMGRGPHAAFSLSSMFGGQIAGAWAMGR 183 Query: 174 P-LVLALCACAFATFIEMGKLPFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQL 229 L+L C +E ++P D E + E + ++SG ++ +G +LK Sbjct: 184 GELLLLPCIFFILLLVENCRIPVDDPNTHLELTMIHEVMVLDHSGPNLAMIVYGAALKLW 243 Query: 230 VVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRI 289 + G+ P A L + ++ +++ +V+ + E+ MARLR+D P + Sbjct: 244 FFAALIAGLVTP--------ALPLWQQAGLRVLIVLLLAVVVGIVESVMARLRMDRVPYL 295 Query: 290 TWAGFGFAFLAFV 302 A LA + Sbjct: 296 LGGASAMAALALI 308 >UniRef50_B9L8T9 EchB n=1 Tax=Nautilia profundicola AmH RepID=B9L8T9_NAUPA Length = 279 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 30/306 (9%) Query: 1 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS 60 M+ + LI L + + G+ R+ +AR+ +R GP ++Q + D KL+ ++ + + Sbjct: 1 MNQTFMLILTLFAPIIGGFVYGVERIVKARMQSRVGPPLMQPFYDFFKLMDKRPMMVHS- 59 Query: 61 GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS 120 + + + L + DL+ ++ IA I S Sbjct: 60 --LHAVMGIMYFVASWFALLVLFMG---------NDLLVAVFFHVIAVLALTIGAFSVRS 108 Query: 121 PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC 180 P++ IGA RE M + EP+++L + QV GS N+ +I + L + Sbjct: 109 PYSVIGAMRELMHMISYEPLMVLMVVGFYQVVGSFNLKDILSYEG----IPLLQLPVVFV 164 Query: 181 ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI 240 A A + + K PFD+AEA QE+ GP EYSG + + G ++ + V Sbjct: 165 AFVLAIPMMLHKSPFDVAEAHQEIVGGPEIEYSGPFYEAVYTGKWIEYVYVFFFVFLFGG 224 Query: 241 PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA 300 + + L + +N+ ARL + +W Sbjct: 225 SHYWLGALLVLFVFLFVNA--------------LDNATARLDFRRMVKFSWFVLIPISAL 270 Query: 301 FVSLLA 306 + LA Sbjct: 271 NIIFLA 276 >UniRef50_B6RQZ1 NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Abispa ephippium RepID=B6RQZ1_9HYME Length = 316 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 117/310 (37%), Gaps = 24/310 (7%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVG 56 + L++ + + + R + +R GP G+ Q D IKL ++ Sbjct: 17 FMSFLLEWVGVLVSVAFFVLLERKLLGYVQDRLGPNKVGFVGIFQSVSDAIKLFSKEEFF 76 Query: 57 -PDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 +++ L+P + + L + +LP + L L+ L+ ++ ++F ++ Sbjct: 77 LYQFDYYMYYLSPMIGFFMSLLLILSLPY--NLNFLSMELFLLYLMSCLSMGGYWFLMAS 134 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + S ++ +G R + + E + + + + S +I + + Sbjct: 135 WASNSIYSMLGGIRSIVQALSYEVCMFIMFLIMFLYSESYSIKMFMEFKC----MFILVN 190 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 + + E+ ++PFD E E EL G +EY F + L +++ + Sbjct: 191 MGMFMLIYISLLAELNRMPFDFVEGESELVSGFNTEYMSGMFALFFLAEYLMMIIISMLL 250 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 V +F+ L + + + ++V ++ + + + R+R D+ + W Sbjct: 251 VILFLG-----------LEMMSLKFTIMVMVIMMSLIMIRGVLPRMRYDLLMDLCWYLML 299 Query: 296 FAFLAFVSLL 305 L + + Sbjct: 300 PLVLIMLYFM 309 >UniRef50_Q0W6T3 Putative hydrogenase membrane component (EchB-like) n=2 Tax=Euryarchaeota RepID=Q0W6T3_UNCMA Length = 313 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 26/317 (8%) Query: 5 YPLIQALVLFAVAPLLSGITRVARARLHNRRGP--------------GVLQEYRDIIKLL 50 I + F V LL+ R AR+ +RRGP VLQ DI+KLL Sbjct: 4 LSWINPFIAFGVGILLAFNMRKVFARIQSRRGPLVWMPGAWHDINRTKVLQPLYDILKLL 63 Query: 51 GRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFF 110 ++++ P + F + P + + L + +PV G L+ + YL Sbjct: 64 SKKTILPATATPFFTIGPIIALVFALALTLFVPV--AGLAFDYSFSLVIIFYLLIGVTMC 121 Query: 111 FAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLS 170 I G + S F AIG RE L + E +LG + A + ++ + Sbjct: 122 IIIGGTASASLFAAIGGVREIELMLANEIPFILGTFALAITYDTLSVQGMMG-------P 174 Query: 171 QSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLV 230 + A A A +++ PFD+AEA+ E+ G +EYSG GV++ L Sbjct: 175 NLLLNPFAAAAFFIAMLVKLHVRPFDIAEADSEIVGGLTTEYSGKLLGVLEITKVLMLFS 234 Query: 231 VLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRIT 290 + +FV +F+ + + + + + V + I + AR R+D + Sbjct: 235 LSALFVDLFL---WVPKGWTLPGVASWALFLAGAFVVSVAIGIVNALFARFRIDQATKWL 291 Query: 291 WAGFGFAFLAFVSLLAA 307 + + ++ A Sbjct: 292 FTASTALGIIAIAWAVA 308 >UniRef50_Q9B893 NADH-ubiquinone oxidoreductase chain 1 n=3 Tax=Schistosoma RepID=Q9B893_9TREM Length = 297 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 105/308 (34%), Gaps = 32/308 (10%) Query: 2 SVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSV 55 S L L++ + R + + R+GP G+LQ + D +KL+ + V Sbjct: 7 SFFIGLEGLLLVLLLVAFFILCERKVLSYIQLRKGPNKVGIAGLLQSFADFMKLVVKIKV 66 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 F M+ + + S + ++ +L +F + + G Sbjct: 67 NGYIVHSWFGWLGCFMLFFCSCMGVYI-YSCSFSGIYYSFMMLYILMVFTFISYGLLMLG 125 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ + A R A V E +L+ L V + GS + S Sbjct: 126 WASWNKYSLLSAVRVAFSSVSYEMILMCVLLVFGMLLGSYGNVSFC--------LMSFIT 177 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L + F E + PFD E+E EL G +EYSG F ++ S+ ++ + Sbjct: 178 PLNYIVWIISMFSESNRAPFDYGESESELVSGSNTEYSGVPFMIIYACESIMIYIISWLT 237 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 +F I ++ + + + R+R D + W Sbjct: 238 SVIFWG-----------------NMISLIIFHLFLFIWARGTFPRVRYDYYVVLIWKYGL 280 Query: 296 FAFLAFVS 303 L ++ Sbjct: 281 VVSLLYIM 288 >UniRef50_Q7YH66 NADH-ubiquinone oxidoreductase chain 1 n=268 Tax=Platyhelminthes RepID=Q7YH66_TAEAS Length = 303 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 103/311 (33%), Gaps = 27/311 (8%) Query: 3 VLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGR-QSV 55 + L LV + R R+GP G+LQ + D++KL+ + ++ Sbjct: 6 FVSGLTGLLVSLLIIAFFILGERKILGYSQFRKGPNKVGIIGLLQSFSDLLKLIVKFKNY 65 Query: 56 GPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISG 115 G + WV V++ V L I + S L+ L + + + +G Sbjct: 66 GFQSRSWVGLFG--VVLLVGLVIYYSFVYGGYYSYSFNSLSLLWFLVITSFCSYSILCTG 123 Query: 116 LDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPL 175 + + ++ + + R A + E + + +A S ++ + + + Sbjct: 124 WGSYNSYSFLSSIRCAFGSISFEACFMCIIIFSALCYCSYSLVDFFLS----GWLSVVIF 179 Query: 176 VLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMF 235 L E + PFD EAE EL G EYSG F + + + + Sbjct: 180 PCLLILYIICILCETNRTPFDYGEAESELVSGFNVEYSGIYFTCLFACEYIIIFIFSWLG 239 Query: 236 VGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFG 295 + + G + + + L + ++ R+R D W Sbjct: 240 MILMFGGGFIGS--------------IFLSFCLFFFMWARATLPRIRYDYFVNFFWEVCL 285 Query: 296 FAFLAFVSLLA 306 + ++ Sbjct: 286 CLLIFSFFIIV 296 >UniRef50_C4FLW9 NADH-quinone oxidoreductase, subunit h (Fragment) n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FLW9_9AQUI Length = 221 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 76/207 (36%), Gaps = 16/207 (7%) Query: 4 LYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDIIKLLGRQSVGP 57 + L+ + +F A L+ I R + R GP G+LQ D +K+L ++ + P Sbjct: 12 VKSLVFVVGMFLAAAYLTLIERKFAGHVQQRPGPLHVGFHGLLQPIADALKVLTKEDLVP 71 Query: 58 DA-SGWVFRLTPYVMVGVMLTIATALPVVTVGSPL---------PQLGDLITLLYLFAIA 107 + +F L + + I +P LI L +I+ Sbjct: 72 NNVDKVLFYLASLMAFVPAIMILAVIPFGEPIQIFGFEIKPYITDLNIGLILALAFGSIS 131 Query: 108 RFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHW 167 + +G + S + IG R+A + + E L + +AGS ++ I + Sbjct: 132 IYGVIFAGWASNSKYPMIGGLRKAAVLIGYEVALGFAMVGPIMMAGSFSLKEIVYAQDGF 191 Query: 168 PLSQSIPLVLALCACAFATFIEMGKLP 194 + +A FA E G+ P Sbjct: 192 FGAFIWYQPIAFIVILFAILAETGRTP 218 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.327 0.169 0.507 Lambda K H 0.267 0.0511 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,129,510,122 Number of Sequences: 3077464 Number of extensions: 105498456 Number of successful extensions: 811445 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 844 Number of HSP's successfully gapped in prelim test: 2975 Number of HSP's that attempted gapping in prelim test: 791483 Number of HSP's gapped (non-prelim): 12628 length of query: 307 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 179 effective length of database: 646,480,964 effective search space: 115720092556 effective search space used: 115720092556 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.4 bits) S2: 93 (40.1 bits)