BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (514 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 672 0.0 UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 625 e-177 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 540 e-152 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 502 e-140 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 454 e-126 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 447 e-124 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 447 e-124 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 412 e-113 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 412 e-113 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 407 e-112 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 390 e-107 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 382 e-104 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 374 e-102 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 363 1e-98 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 362 2e-98 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 354 4e-96 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 354 5e-96 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 352 2e-95 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 322 2e-86 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 319 2e-85 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 317 5e-85 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 311 4e-83 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 307 5e-82 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 304 7e-81 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 301 3e-80 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 291 4e-77 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 288 4e-76 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 286 1e-75 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 285 4e-75 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 282 2e-74 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 281 4e-74 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 280 9e-74 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 278 3e-73 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 278 4e-73 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 277 7e-73 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 275 4e-72 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 273 1e-71 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 273 1e-71 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 272 3e-71 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 271 4e-71 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 271 6e-71 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 270 1e-70 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 268 5e-70 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 266 1e-69 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 265 3e-69 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 264 6e-69 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 263 1e-68 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 259 2e-67 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 259 2e-67 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 258 5e-67 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 255 3e-66 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 254 4e-66 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 254 8e-66 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 253 9e-66 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 253 1e-65 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 252 2e-65 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 249 2e-64 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 249 2e-64 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 242 2e-62 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 242 3e-62 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 240 1e-61 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 239 2e-61 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 239 2e-61 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 236 2e-60 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 224 7e-57 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 224 7e-57 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 223 1e-56 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 223 2e-56 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 222 3e-56 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 221 7e-56 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 213 2e-53 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 212 3e-53 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 211 4e-53 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 207 5e-52 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 207 7e-52 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 206 2e-51 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 202 2e-50 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 202 2e-50 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 199 2e-49 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 199 3e-49 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 198 5e-49 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 197 7e-49 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 195 3e-48 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 191 6e-47 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 191 7e-47 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 189 2e-46 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 189 2e-46 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 184 7e-45 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 181 5e-44 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 180 1e-43 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 179 2e-43 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 177 6e-43 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 177 7e-43 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 177 1e-42 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 170 1e-40 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 167 7e-40 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 158 4e-37 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 148 4e-34 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 148 4e-34 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 147 6e-34 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 144 6e-33 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 144 1e-32 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 142 5e-32 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 140 1e-31 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 139 4e-31 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 138 4e-31 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 134 1e-29 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 131 8e-29 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 128 5e-28 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 125 5e-27 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 123 2e-26 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 116 2e-24 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 115 6e-24 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 94 8e-18 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 92 5e-17 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 91 8e-17 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 90 2e-16 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 88 7e-16 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 83 2e-14 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 81 8e-14 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 80 2e-13 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 80 3e-13 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 79 6e-13 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 76 3e-12 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 67 2e-09 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 65 5e-09 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 64 1e-08 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 62 7e-08 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 61 8e-08 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 59 3e-07 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 59 5e-07 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 57 2e-06 UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 56 3e-06 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 55 4e-06 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 50 2e-04 UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 46 0.004 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/506 (61%), Positives = 404/506 (79%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D+++LSR QFALTA+YHFLFVPLTLG+ FLLAIMET+YV++GK IY+DMT+FWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFALGVATGLTMEFQFGTNWS+YS+YVGDIFGAPLA+E LMAFFLESTFVGLFFFGW R Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L K QH+ VTWLVA GSNLSALWIL ANGWMQ P + F+ +T+RMEM SFSELV NPV+ Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 QVKFVHTV +GYVTGAMFI+ ISAWY+L+GR+ A RSFAI + FG A++ + LGD Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S YE+ VQ KLAA+E EW+T+PAPA F + P+Q++E N FA++IP LGI+AT S+ Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D PV GLK LM + R++ G A+ L++++ G+ + V F ++ DLGYG+LL RY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + + Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I G Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQS 506 LYTLFL+AE++LM K+ARLGPS++++ Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKT 506 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 291/504 (57%), Positives = 387/504 (76%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 V+DLSR QFA+TALYHFLFVPLTLG+ FLLAIME++YV+TGK +Y+DM +FWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+TMEFQFGTNW++YS+YVGDIFGAPLA+E L AFFLESTF+G+FFFGW RL+ Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K QHL VTWLVA GSNLSALWIL ANGWMQ+P GA F+ +T+RME+ F L+ NPV+QV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHTV +GYVTGA+F++AIS++YLL+ R+ A RSFAI S FG +I+ + LGD S Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 YEV +VQ KLAA+E EW+T PAPA F ++ +P ++++R FA+KIP +LGI+AT SLD+ Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+K+L+A+ R++ G + + L++E+ GN+ P + AF ++ DLGYG+LL +Y P Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 ++ + Q + A + IP VA +FWSFR MVG G +L++ + A + R + W+ Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 LK AL+SLPLPWIA + GWF+ E GRQPW I +LPT+ + S+L+TG L SLI ++ Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLIAEVYLMQKYARLGPSAMQS 506 TL L+ E+YLM ++ARLGPS++ + Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHT 508 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust. Identities = 263/506 (51%), Positives = 349/506 (68%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 V++LSR QFA+TA+YHF+F PLT+GL FLL IME++YV+TGK I+R MT FWG LFGINF Sbjct: 21 VVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVLFGINF 80 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ MEF+FG NWS+YS+YVGDIFGAPLA+E LMAFFLE+TF+GLFF GW RL+K Sbjct: 81 AMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGWNRLSK 140 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 QHL+ TWLVA GSN SALWIL ANGWMQ P GA F+ DT+RME+ F ++FNPV+Q K Sbjct: 141 VQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNPVAQAK 200 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 FVHTV AGYV GA+F+M+ISA+YLLRG+ +A RSFA+ + FG L+ + + LGD S Y Sbjct: 201 FVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLGDESGY 260 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 ++ Q +KLAA+E W+TE APA F P Q RN +A+KIP L+G++AT SLD+P Sbjct: 261 AASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATRSLDEP 320 Query: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363 +PG+ L+ R++ G++A+ +Q I + + F DLG+G+LL RY D Sbjct: 321 IPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLKRYRDD 380 Query: 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423 + + T Q A +P+V P+FW+FRIM G L+ +A + + RW L Sbjct: 381 IGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQEKRWFL 440 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYT 483 +ALW+LPLPWIAIE GWF+ E+GRQPWA++ +LPT+ A S L ++ +L+ LYT Sbjct: 441 SLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGFTALYT 500 Query: 484 LFLIAEVYLMQKYARLGPSAMQSEQP 509 L+ + L K GP + P Sbjct: 501 TLLVIAIKLSLKTINKGPEVLFPPMP 526 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 254/519 (48%), Positives = 345/519 (66%), Gaps = 8/519 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +V+DLSR+QFALTALYHF+FVPLTLGL F+LA MET+YVVTG+ IY+DM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+TMEF+FGTNWS YS++ GD+FG PLA+E LMAFF+ESTFVGL FFGW RL+ Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+LVA GSNLSALWIL AN M P GAHFD +T+RM+ SF LVFNP +Q Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHT +AGYV+ AMF+M ISA+YLLRG+ R A RSF + ++FG ++ + + LGD Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAP-APFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AA+EG W T P P+ + A P+ ++ N F + +P +L L TH+ D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +P+ G+ L PR++ G A ++ + + L F E D+GYG+L +R+A Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSDAD-LTLFTQHEQDMGYGLLAARHA 365 Query: 362 P--DMNHVTAAQYQAAMRGAIPQVAP----VFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 P D+ ++ Q ++ P + P FWSFR MV + I+ +L+ + Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 ++ ++ +LK+ +WS+PLP +A E GW E GRQPW + LPT+ + S+ + FSL Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 I V LY++F+ AE+YLM K+ARLGP E Q Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGPEHDSMEPHAQHDA 524 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust. Identities = 247/565 (43%), Positives = 338/565 (59%), Gaps = 67/565 (11%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 +DL+R QF LTA +HFLFVPLTLGL ++L ME +Y+ TGK +Y+DM +FWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 LG+ TGLTMEF+FGTNWS+YS VGDIFG PLA+E L AF LESTF GLFFFGW +L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 QHLL T+ +A GS+ SAL IL ANG+MQ+P G+ F T+RME S +L N +Q F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H + AGY T A+F++ ISA+YL+RGR+ A RS AIG FG + I + GD++ + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 +VQP+K+AA+E EW T APA F+ VA P Q +++N F + IPA+LG++ATHS D + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 PGLKNLMAET-------------YPRLQRGRMAWLLMQEI----SQGNREPHVLQAFRGL 347 PG+K ++ Y ++ G+ A + ++ S+ + P L + Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIK-- 373 Query: 348 EGDLGYGMLL-------SRYAPDMNH------------------VTAAQ----------- 371 EG L Y LL S PD ++ V AAQ Sbjct: 374 EGGLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATI 433 Query: 372 ---------YQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH--- 419 +A +P VA VFWSFRIMV G + ++++ L+ R + + Sbjct: 434 AKAANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFS 493 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 R++L++ +WS+PLP+IA AGW++TE GRQPW + D LPT + SALT + S+ + Sbjct: 494 RFILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFF 553 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAM 504 + T V+LM KYARLGPS++ Sbjct: 554 LIDTALFAVMVFLMFKYARLGPSSL 578 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/504 (42%), Positives = 330/504 (65%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 ++++LSR+QFALTAL+HFLFVPLTLGL ++L IM ++YV TG IY+DMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+T+EF+FG NW+++S +G F LA+E + AF LE+T GLFFF W ++ Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+L+A G++LS + IL AN WMQ PT F+ + +E+ S L N ++Q+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H G++TG++F+M +SA+Y+L GR+ A RSFA+G FG + + GD + Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+ +P K+AA+E +WQT+ PA + ++A+P Q +++N F + IP L ++ATHSL Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 VPG LM R++ G +A+ M+++ + P + + DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + + T A+ +AA R IP +A FWSFR M G L+LL+++ R + QHR Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 L+ AL+++PLP++A E GW + E GRQPW++ +ILPT+ + S ++ + SL+ + Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLIAEVYLMQKYARLGPSAMQS 506 + + E++LM KYAR GPS++++ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLET 509 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust. Identities = 213/419 (50%), Positives = 303/419 (72%), Gaps = 5/419 (1%) Query: 98 MEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA 157 +E LMAFFLESTFVGLFFFGW+RL+K +HLL T+ VAFGSN SALWIL ANGWMQ P + Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 HFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVAL 217 F+ +T+RME++SFSELV NPV+Q KF+H YV GA+F++ IS++Y+L+GR+ A Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQ 277 RSF++G+ FG +AII L +GD S YE+ + QP KLAAMEGE++T+PAPA ++ P Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 DQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNRE 337 + +N F++ IP GI+AT SLDK + GLK++ R++ G +A+ L++++ GN Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 PHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG 397 +AF+ ++ DLG+G+LL +Y P++ T Q Q A IP V P FW+FR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 SLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 L+L+++ A +Q +RGK++ R++L+ L+ LPLPWIAIE+GWF+ E+GRQPWAI ++L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQS-----EQPTQ 511 P ++SALTTG L F++ ++ GLYTLFL+ E+YLM KY RLGPSA+++ EQ T+ Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQSTK 419 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/506 (43%), Positives = 313/506 (61%), Gaps = 15/506 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL ++ +MET YV TGK +++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ +SA WIL AN WMQYP G F+ +T+R EM F+ + +P++ Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++ ++ GA+F++ IS WYLLR R++ AL S + + G A + T GD S Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+VQP+K+AA EG PF + A LKIP +L ILATH +D Sbjct: 248 VQVAKVQPMKMAAAEGL-HDGGNGVPFTI-----------AGDLKIPKMLSILATHDIDG 295 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--GDLGYGMLLSRY 360 VPG+ NL+ Y ++ G A ++I +G L AFR GD + Sbjct: 296 YVPGINNLLEGGY-QMPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + Y +P V FWSFRIMVG G +L +I L+ + + K+ R Sbjct: 355 LDENVKYFGYGYIKDPAHLVPNVGLTFWSFRIMVGLGGYFILFFIIVLIVSKKEKLADMR 414 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+ ++ALW++PL +I +AGW + E GRQPWAIQD+LP +A S L TG + + + + Sbjct: 415 WLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFIFLL 474 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQS 506 L+T+ L AE+ +M K + GP +++ Sbjct: 475 LFTVLLFAEIGIMLKAIKKGPEGIKN 500 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/528 (43%), Positives = 315/528 (59%), Gaps = 47/528 (8%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL + AIMETIY TG ++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ LSALWIL AN WMQYP G HF+ DT+R EM F + +PV+ Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++G++ GA+F++ IS WYLL+ R AL S + ++FG +A I + GD SA Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEVAQVQPVKLAAMEGEWQT------------EPAPAPFHVVAWPEQDQERNAFALKIPA 290 Y+VAQ QP+KLAAMEG ++ PA + +Q F +K P Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNGVGLVGIGILNPAKTSYL------DNQNAFIFDIKFPK 301 Query: 291 LLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGD 350 LL LA ++ VPG+ NL+ Y +G +A ++I +G L +R Sbjct: 302 LLSFLAERDINAYVPGIVNLIEGGYTT-NKGTVALSAKEKIEKGKAAIKALADYR----- 355 Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGA---------------IPQVAPVFWSFRIMVG 395 + D + A QY+ + IP V F+SFR+MV Sbjct: 356 --------KAVKDKDTAAAGQYRVTLEENFPYFGYGYIKDPAELIPHVGLTFYSFRVMVI 407 Query: 396 CGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD 455 G +L+ +I L+ +GKI RW+ + LWS+PL +IA +AGW + E GRQPWAIQD Sbjct: 408 LGCFFILLFIITLIWDKKGKIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQPWAIQD 467 Query: 456 ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 ILPT ++ S L + + + + L+T+ LIAE+ +M K + GP A Sbjct: 468 ILPTSASISKLNPSSVQTTFYLFLILFTILLIAEIGIMVKAIKKGPEA 515 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/518 (42%), Positives = 310/518 (59%), Gaps = 36/518 (6%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 ID SR QFALTA+YH+LFVPLTLGL ++ I+ET Y T K +++ + FW KLFGINFA Sbjct: 36 IDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQKLFGINFA 95 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW++++ Sbjct: 96 MGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFFGWKKVSAG 155 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 HL TWL G+ +SA WIL AN WMQYP G F+ DT+R EM SF ++ +P + KF Sbjct: 156 FHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVALSPFAVDKF 215 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 HTV + ++ GA+F++ +S+WYLL+GRE+ +A++S IG++ G A + GD+SAY+ Sbjct: 216 FHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAALTGDNSAYQ 275 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP--EQDQERNA----FALKIPALLGILATH 298 VAQVQP+KLAAME + + V P Q RN + + +P L +LATH Sbjct: 276 VAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPKALSVLATH 335 Query: 299 SLDKPVPGLKNLM-----------AETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGL 347 D VPG+ NL+ ++QRGRMA +Q+ G ++ + Sbjct: 336 DFDGYVPGINNLIDGYVKEDGTKEPSVAEKMQRGRMAITALQQYRAGKKDEATRKTLTDN 395 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 GYG Y + +P + FWSFR+MVG G L +L LI+ Sbjct: 396 IKYFGYG-----------------YVKSADQIVPNIPLNFWSFRVMVGLGILFILFFLIS 438 Query: 408 LVQTLRGKIDQH--RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA 465 + R I + RW+ A+ +PL ++A EAGW + E GRQPW IQD+LPT+ A S Sbjct: 439 GHVSWRKDISEKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDMLPTWVAVSD 498 Query: 466 LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 L G + + + + L+T L E+ ++ K + G A Sbjct: 499 LNAGSVMITFFLFLALFTTMLAVEINILFKQIKKGMEA 536 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/505 (43%), Positives = 312/505 (61%), Gaps = 12/505 (2%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 +D SR QFALTA+YH+LFVPLTLGL ++ IMET Y T K +R +FW +LFGINF Sbjct: 12 TVDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINF 71 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW +++ Sbjct: 72 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSA 131 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G+ LSA WIL AN WMQYP G F+ +T+R EMTSF ++ +P + K Sbjct: 132 GFHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDK 191 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F HTV + +V GA F + +S WYLLR R +A +S IGS+ G +A + G SAY Sbjct: 192 FTHTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAY 251 Query: 244 EVAQVQPVKLAAME-----GEWQTEPAPAPFHVVAWPE-QDQERNAFALKIPALLGILAT 297 VAQ QP+KLAAME G Q+ A + + P+ ++ + +P +L ILAT Sbjct: 252 MVAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILAT 311 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 S VPG+++++ + Y + G L ++ +G + L+ +R + +L Sbjct: 312 KSTTGYVPGVRDII-KGYTKAD-GTKEPSLKEKQERGKKAIQALKDYRAGKDKESNEKIL 369 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 DM + + A + +P + FW+FRIMVG G L +LV + L + I Sbjct: 370 DH---DMKYFGYGYIKDANQ-LVPFIPINFWAFRIMVGLGGLFILVFAVMLFLLYKKDIT 425 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 + RW+ + + +PL +IA E+GW + EFGRQPW IQD+LPT++A S L++G +AF+ + Sbjct: 426 RPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDLSSGGIAFTFFL 485 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPS 502 + L+T L AEV +M K + GP+ Sbjct: 486 FLVLFTAMLTAEVSIMCKQIKKGPA 510 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/525 (40%), Positives = 313/525 (59%), Gaps = 31/525 (5%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +++ +R QFA+TAL+HF FVP TLG+ F++A ETIYV TGK ++++T+FW +FGI Sbjct: 4 YSMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLIFGI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+E ++AFFLE+TF + FFGW+R+ Sbjct: 64 NFAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGWKRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA--HFDIDTLRMEMTSFSELVFNPV 179 +K HL +WL+A GSNLSALWIL ANG+MQ+PT ++ID R+EMT F ++ PV Sbjct: 124 SKGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMITQPV 183 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 +QVKF+H V + Y A+F++ IS+ YLLRG+ ++ A +S + + FG +A I T +GD Sbjct: 184 AQVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAVIGD 243 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERN--------AFALKIPAL 291 AYEVA QP K+AA EG E AP + P+ RN AF +++P + Sbjct: 244 EHAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIELPGM 302 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--G 349 L +L ++ VPGLK+L+ W + ++G + L+A+ + G Sbjct: 303 LSLLGKRDINAFVPGLKDLV-----NGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANG 357 Query: 350 DLGYGMLLS-----RYAPDMNHVTAAQYQAAMRGAI-------PQVAPVFWSFRIMVGCG 397 D GM + + D+N V + G + P VAPVF+SF IMV G Sbjct: 358 DKA-GMEAAKAEFYKVVADVNGVKVTRADLMGYGYLTDPTKLYPPVAPVFYSFHIMVALG 416 Query: 398 SLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 +L+ L+A V L+G + + V K+A+ S+PLPWI GW E GRQPW + +L Sbjct: 417 FWFILLFLLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVFGVL 476 Query: 458 PTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 PT + + + + + + + + + IAE+ ++ + GP Sbjct: 477 PTSESVTPIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPK 521 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 208/531 (39%), Positives = 313/531 (58%), Gaps = 43/531 (8%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 ++ SR QFALTA+YH+LFVPLTLGL ++AI+ETIY GK ++ +FW KLFGINF Sbjct: 8 LVSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINF 67 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++K Sbjct: 68 AIGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSK 127 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G++LSA+WIL AN WMQ P G F+ DT+R EMT F LVF+ + K Sbjct: 128 GFHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINK 187 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLR--GRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F HT+ + + G++F + + YLLR + ++ AL++ I + FG A + T GD+S Sbjct: 188 FWHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTS 247 Query: 242 AYEVAQVQPVKLAAMEGEWQT----------EPAPAPFHVVA-------WPEQDQERNAF 284 AY VAQ QP+KLAAMEG + + + P + P+ D+E F Sbjct: 248 AYNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLF 307 Query: 285 ALKIPALLGILATHSLDKPVPGLKNLMAETYPR------------LQRGRMAWLLMQEIS 332 + +P +L +L T + VPG+ N++ Y + +QRGR A + + + S Sbjct: 308 NVSVPRVLSVLGTRNPSGYVPGINNILEGGYVKADGTTAIPVDSMMQRGRRAIMALNDYS 367 Query: 333 QGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI 392 + + +E L + ++ P + Y +P + ++SFRI Sbjct: 368 KAKQAGD-------MEAALQHKSVIDENFPYFGY----SYIQHKNDIVPPIGLTYYSFRI 416 Query: 393 MVGCGSLLLLVMLIALVQTLR-GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 MVG G L +L+ L+A + + + K + RW +A+ +PL W+A ++GW + E GRQPW Sbjct: 417 MVGLGMLFILLFLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPW 476 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 IQD+LP +A S L G + + + + L++ L+AE+ +M+K + GP Sbjct: 477 TIQDLLPVQAAVSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPE 527 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 207/509 (40%), Positives = 284/509 (55%), Gaps = 18/509 (3%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D++ LSR+QF +TA YHFLFVPLTLGL ++AI++TIY+ T Y ++ F KLF IN Sbjct: 2 DLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGLTMEF+FGTNW YS VGDIFGAPLA+E LMAFFLESTF+GLF FG R++ Sbjct: 62 FAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRVS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHF--DIDTLRMEMTSFSELVFNPVS 180 H W+VA GS LSALWIL AN WMQ P G ++ +T+F E N S Sbjct: 122 DVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHSS 181 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 ++F+H V AGY+ G F+M + A+YLL+G+ +A +F + I + GD Sbjct: 182 IIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGDI 241 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 Y+V+ QP+K+A MEG+W+TE A ++ +Q+++ LKIP LL IL+ H Sbjct: 242 HGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHDP 300 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + G+K+L+ E + Q R P + Q + LE + + Sbjct: 301 NAEFKGIKDLVKEYQQKAQEA------------SARIPVLEQKLKELEATNASQEEIQKV 348 Query: 361 APD--MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 D M A Y +P VA VF +F +MV G V++ L+ +G + Sbjct: 349 KDDLAMAKSQAKAYNITFND-LPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 ++ L L S+PLP+IA GW E GRQPW +Q +L T S T + FS+I Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSE 507 + +YTL I Y M K + GP +SE Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKSE 496 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 221/514 (42%), Positives = 288/514 (56%), Gaps = 76/514 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+RWQF +T++YHFLFVPLTLGL L+AIMETIYV TG Y++M RFWG+LF IN Sbjct: 2 DALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+ EF FG NWS YS +VGDIFGAPLA+EAL AFFLESTF+GL+ FGW++L+ Sbjct: 62 FAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKLS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H WLVAF SNLSA WIL AN +MQ P G F + R EMT F L+ NP Sbjct: 122 PALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVLY 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 +F HTV+AG+VT A F+M ISA++LLR + RSF + + G + + +G Sbjct: 180 QFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQG 239 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 + QP+K+AA E W + PAP +VA +Q+ ++N +KIPAL LA +S Sbjct: 240 QHLVATQPMKMAAAEALWDSAD-PAPLALVALVDQENQQNNLEIKIPALTSFLAYNSFRG 298 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V GLK L A ++ GN P Sbjct: 299 EVKGLKELQAAA-------------AEQYGPGNYIP------------------------ 321 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 VAPVFWSFR+M+ G L+L+ L +L +G ++ V Sbjct: 322 -------------------PVAPVFWSFRLMIAAGLWLILLSLYSLYLWRKGLLESRPLV 362 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAI-------QDILPTYSAHSALTTGQLAFSL 475 LK LWS+P+P++A AGWF+ E GR PW + + P SA + LTT +AF+L Sbjct: 363 LKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTT-LVAFTL 421 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQP 509 LY L + +VYL+ KYAR G EQP Sbjct: 422 -----LYGLLAVVDVYLLAKYARQG----VVEQP 446 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 354 bits (909), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 199/499 (39%), Positives = 281/499 (56%), Gaps = 24/499 (4%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D++DLSR+QFA TA+ HF+FVPLTLGL +AI++TI T Y + F KLF +N Sbjct: 2 DLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAVN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA GVATGLTMEF+FGTNW YS +VGDIFGAPLA+E LMAFFLESTF+G+F FG R++ Sbjct: 62 FAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRIS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT---LRMEMTSFSELVFNPV 179 H W+VA GSNLSALWIL AN WMQ P G + T +R E+T+F E V N Sbjct: 122 DGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKI-VQTPQGIRAELTNFWEAVINHT 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + ++ +HTV AG +T F+M + A++LLR + ++A + +F + + + +GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 ++ + VA+ QP+KLA MEG+W TE PA V + +Q ++ ++IP LL L+ H+ Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTE-QPASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 D V G+ +L+ + Q ++ N P + + D Y Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDK---IVADKAY------ 350 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 A Y +++ +P + VF F IMVG G V L L +G + + Sbjct: 351 ---------AKAYNISLKD-LPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 + LK L+S+PLP+IA E GW E GRQPW + +L T A S +T + FS++ V Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLIAEVYLMQKYAR 498 +Y L V M K + Sbjct: 461 TIYILLFYVYVTTMIKKVK 479 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 354 bits (908), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 210/503 (41%), Positives = 285/503 (56%), Gaps = 70/503 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFA+T ++HF+FVPLTLGL ++A MET Y +TG + MTRFWGKLF IN Sbjct: 2 DTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+TMEFQFG NW+ YS YVGDIFGAPLA+EA +AFFLES F+GL+ FGW +++ Sbjct: 62 FALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKVS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HLL WLVA +NLS L IL AN WMQ P G + + R EMT F ++ NP + Sbjct: 122 QKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGLI 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF H + A Y A F+M ISAW+LLR E + RSF ++FG + +GD S+ Sbjct: 180 KFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLSS 239 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 EVA+VQP K AAME W+T+ A +++ P+ E+N +SL+ Sbjct: 240 VEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPD---EKNE-------------RNSLEA 282 Query: 303 -PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +P + +L+A N E L++F Sbjct: 283 FSIPNMISLLA------------------FRDANAEVTGLKSFP---------------- 308 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 R P V PVF SFR+MVG G +L LIA++ + +G ++HR Sbjct: 309 ---------------RELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISFKGHPERHRL 353 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVG 480 L + ++SLPLP+IA + GW + E GRQPW + +L T A S +++ Q+A SL Sbjct: 354 FLTLLVFSLPLPYIANQLGWLVAEMGRQPWIVYGVLKTADAVSTSVSATQVAISLAGFTL 413 Query: 481 LYTLFLIAEVYLMQKYARLGPSA 503 LY + ++YL+ KYAR GP + Sbjct: 414 LYGGLGVIDIYLLAKYARKGPDS 436 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 352 bits (902), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 206/519 (39%), Positives = 291/519 (56%), Gaps = 69/519 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M++ +DL+R QFALT++YH+LFVP TLG+ +A +E YV TGK +Y+ M +FWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+EALMAFFLESTF+G++ FGW R Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L+K H LV VA G+NLSA WIL AN +MQ+P G F + R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRS----FAIGSVFGTLAIIGTLQ 236 +F H V+ G +T + IMAISAW+LLR RS I VFGTL + Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALA--- 235 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 G + +VQP+K+AAME W+T+ PAPF +VA + ++N AL+IP L L Sbjct: 236 -GHHQGQYITKVQPMKMAAMEALWETQD-PAPFSLVANIDTKAQKNTGALEIPGGLSFLT 293 Query: 297 THSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 +S V G+K+L A++ Sbjct: 294 QNSFTSGKVEGIKDLQAKSE---------------------------------------- 313 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 ++Y P N++ P V +FW+FR+MV GSL+LLV + L+ + K Sbjct: 314 --AQYGPG-NYI-------------PDVPAIFWTFRVMVAAGSLMLLVAFVGLILNAKDK 357 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI-LPTYSAHSALTTGQLAFS 474 + ++R LK+ W LPLP+IA GWF+ E GRQPW + + L A ++T ++ + Sbjct: 358 LVENRTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTT 417 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +I +Y + IA +YL ++ + GP S +++ Sbjct: 418 IIGFTLVYIVAAIAAIYLAVEHIKKGPDGNPSHDVVEKE 456 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 189/487 (38%), Positives = 263/487 (54%), Gaps = 65/487 (13%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R QFA T L+HFLFVP+++GL+F++A+MET+Y+V +Y M +FWG LF INFA+G Sbjct: 6 LARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLINFAVG 65 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFF+ES F+GL+ FGW RL K H Sbjct: 66 VVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRLPKKIH 125 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L WLV+FG+ +S+ WIL AN +MQ P G F I R EM F L+ NP V+F H Sbjct: 126 ALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLWVEFPH 183 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 + TGA FI +SA+ LL+ +E +SF + + G A +G G A + Sbjct: 184 VIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLM 243 Query: 247 QVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPG 306 + QP+K+AA EG W+ PA + A + E+++ +K+P L LA V G Sbjct: 244 ESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGSVKG 303 Query: 307 LKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNH 366 +K L AE Y ++ +G+ P V F Sbjct: 304 MKTLQAE-YEKIY------------GKGDYIPPVKTTF---------------------- 328 Query: 367 VTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMA 426 WSFRIMVG G +++L L L R K++ +W L++ Sbjct: 329 ---------------------WSFRIMVGAGVVMILAALGGLWLNRRKKLENSKWYLRIM 367 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPT-YSAHSALTTGQLAFSLI------MIV 479 + + P++A AGW MTE GRQPW + ++ T S +T G L FS+I MI+ Sbjct: 368 IALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGVMYMIL 427 Query: 480 GLYTLFL 486 G +FL Sbjct: 428 GALLVFL 434 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 193/502 (38%), Positives = 278/502 (55%), Gaps = 62/502 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG--KTIYRDMTRFWGKLFG 60 DV++LSR+QFA T+++HF FV LT+GL FL+A+MET V + +Y MT F+G LF Sbjct: 2 DVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLFL 61 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EFQFG NWS YS +VG+IFG PLA+E LMAFFLESTF+GL++FG R Sbjct: 62 INFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKDR 121 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L + L WLVA G+ +SA WI+ AN WM +P G +++ + +T F +VFN + Sbjct: 122 LKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVG--YEVVDGQARLTDFGAVVFNYKA 179 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + F H + +V F++ ISA++LLR ++ +V RS IG VF + + ++ G + Sbjct: 180 WLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGHT 239 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 A + QP+K AAME +W+T +PAP+ +VA +Q+ N +L+IP + ILA +SL Sbjct: 240 EAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNSL 299 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + G+ L E +A+ EGD Sbjct: 300 EGRYEGINQL--------------------------EEQYDEAYG--EGDY--------- 322 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--IDQ 418 +P VA V+WSFRIMV GSLLL + L R + +D Sbjct: 323 -------------------VPPVAWVYWSFRIMVAIGSLLLATAFLGLFLWWRRRQGLDG 363 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 RW L+ + +PLPWIA GW +TE GRQP+ + +L SA + G++ L+ + Sbjct: 364 TRWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVGL 423 Query: 479 VGLYTLFLIAEVYLMQKYARLG 500 +Y + +VYL+ AR G Sbjct: 424 WVVYLALIGLDVYLLTVTARAG 445 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 194/504 (38%), Positives = 274/504 (54%), Gaps = 47/504 (9%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKT----IYRDMTRFWGKL 58 D + L+R QFALTA+YHFLFVP+TLGL LLAI+ T + +Y + F+ L Sbjct: 2 DAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTTL 61 Query: 59 FGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW 118 F INFA GV G+ +EF+FGTNWS YS VGDIFGAPLA+EA+ AFFLES F+G+ FG Sbjct: 62 FAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFGR 121 Query: 119 QRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNP 178 R++ + TW+VA G+NLSALWIL AN W Q P G F ++ + + SF + V N Sbjct: 122 DRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTPKG--FYLEGGKAYLASFFDAVVNY 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + +FVH +AG +TGA+F+ ISA+Y+L+ + +VA SF I G +A + + G Sbjct: 180 STPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIAG 239 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D Y+VA+ QP+KLA ME +W+TE A +V ++IP LL ILA H Sbjct: 240 DLHGYQVARTQPLKLAMMEDKWETESG-AGLEIVP-----------GIEIPKLLSILAYH 287 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 D V G+K+L+ +T+ ++ +G +E+ + L Sbjct: 288 DPDAKVYGIKDLV-QTFQKIAKG-------EEVGEDE---------------------LP 318 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 D Q IP FWS R MV G + + + T++ I+Q Sbjct: 319 ELWLDPRQFAGRQSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIEQ 378 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 RW+LK+ +S+PLP +A GW + E GRQPW + IL T A S L GQ+ S+I+ Sbjct: 379 RRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIILF 438 Query: 479 VGLYTLFLIAEVYLMQKYARLGPS 502 +Y + + + LM + GP Sbjct: 439 SSIYFIVFLIFLGLMVQKVIKGPK 462 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 181/517 (35%), Positives = 281/517 (54%), Gaps = 66/517 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + ++RWQF +T +YHFLFVP+T+G+ F +AI ET +V T K +Y T+FWGK+F IN Sbjct: 2 DPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+ EFQFG NWS YS +VGD+FGAPLAMEAL+AFFLESTF+GL+ FGW +L+ Sbjct: 62 FAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKLS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H WLV+ G+ LSA +I++AN +MQ+P G + D R EM ++ P++ Sbjct: 122 PRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNMW 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV---ALRSFAIGSVFGTLAIIGTLQLGD 239 + H + ++GA I++++L++ R+ V A+R +G + G+LA+I T GD Sbjct: 182 AYSHVIAGAILSGAAMFAGIASYFLMKKRDVEVFRPAVRFGLVGMLIGSLAVIVT---GD 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A + VQP+K+AA E W T A F + D F++++P +L +AT S Sbjct: 239 LLAKVMTDVQPMKMAAAEALWDTTEG-ASFSLFTIGTLDGSSEVFSIRVPGVLSFMATES 297 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 V G+ ++ A+ ++ G+ P Sbjct: 298 FSGTVEGINDVQAQ-------------FEEQYGPGDYRP--------------------- 323 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPV-FWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 + PV +W FRIM+G G ++LLV ++ L T +G++ + Sbjct: 324 -----------------------IIPVAYWMFRIMMGAGFVMLLVSIVGLWLTRKGRLPE 360 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF-SLIM 477 + V ++A++++ P + AGW TE GRQPW + + T + S +G SLI+ Sbjct: 361 SKTVWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLII 420 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 LY + + EV L+ KY ++GP + Q + ++G Sbjct: 421 FTLLYGILAVVEVGLVVKYVKIGPPSEQEALASIRRG 457 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 203/531 (38%), Positives = 283/531 (53%), Gaps = 57/531 (10%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D ++RWQF +T +YHF FVP+T+ L L+A+M+T+++ T Y +T+F+GKLF IN Sbjct: 2 DAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTFVGL+ FGW++L Sbjct: 62 FALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +L A G+ +SA++IL AN WMQ P GA ++ T R E+T F ++ NPV + Sbjct: 122 KGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFKA 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYL---LRGR--------ERNVALRSFAIGSVFGT--- 228 FVH + + Y I AI+ W+L RGR E ++R++ S FG Sbjct: 182 TFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWVL 241 Query: 229 -LAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALK 287 +A +G + GD + QP+K+AA E +Q + F V+ +D +ALK Sbjct: 242 IVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNT---SDFSVLTIGNKDGSEEVWALK 298 Query: 288 IPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGL 347 IP +LG L V G+ L + R G++ P LQA Sbjct: 299 IPGMLGFLGNGKWGSQVKGINELKSYQVHEYTYHR---------KDGSQTP--LQA---- 343 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVG---CGSLLLLVM 404 Y +L R D N + P V +W+FRIM+ G L+ LVM Sbjct: 344 ----SYQNVL-RQKIDANGIKLE----------PNVPLSYWTFRIMITLGMIGGLIGLVM 388 Query: 405 LIALVQTLRGKIDQHRWVLKMALWSLP-LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAH 463 LIA+ K H W L + + +LP LP AI GW TE GRQPW + +LPT +A Sbjct: 389 LIAMRGGRNPK--PHGW-LTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTAAV 445 Query: 464 SA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG-PSAMQSEQPTQQ 512 S ++ G + FS I +Y + + EV L K + G P +QP + Sbjct: 446 SPNVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELSTRDQPVTE 496 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 160/320 (50%), Positives = 211/320 (65%), Gaps = 4/320 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR+QFA+T YHFLFVPLT+GLI L+A MET +V T +YR M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLA+EAL+AFFLESTF+G++ FG + Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++ W+VA G+N+SALWI+ ANG+MQ P G + R+E+ +F E+V NP + Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVG--YIERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 FVHTV++ Y+ GA F+MA+SAW+LLR + +SF G + G +A T +G Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGHK 256 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFA-LKIPALLGILATHS 299 SA A++QP K AA+E W+T+ + PFH+V P+ ERN L IP L THS Sbjct: 257 SASFAAKMQPAKGAALEAVWETKES-LPFHIVQIPDPKNERNIVEFLTIPKLGSYFYTHS 315 Query: 300 LDKPVPGLKNLMAETYPRLQ 319 D V G + + P + Sbjct: 316 FDGKVVGFDQIPKDERPNVN 335 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V VF+SFR+MV G + + + K+ + + LK+ ++S+ LP++AI AG Sbjct: 332 PNVNIVFYSFRLMVALGLYFVALFWYGFYLYRKNKLVESQRFLKLVMYSVLLPYVAINAG 391 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 W + E GRQPW + ++ T A S ++ Q+ FSL+ +V YT+ LIA+VYLM KYA+ G Sbjct: 392 WVVAEVGRQPWTVYGLMRTAEAVSPISLSQIIFSLVSLVLFYTILLIADVYLMLKYAKKG 451 Query: 501 PSAMQSEQPTQQQ 513 P + + + Q Sbjct: 452 PYTSAATKGGEIQ 464 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 192/518 (37%), Positives = 277/518 (53%), Gaps = 54/518 (10%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D++D++RWQF +T +YHFLFVPLT+GL L+A+MET ++ T + + + +F+GKL IN Sbjct: 2 DILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 62 FALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H+ WLV G+ SA +IL AN WMQ+P G ++ DT R E+T F ++ N V + Sbjct: 122 RKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQLI 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAI--GSVFGTLAIIGTLQLGD 239 F H ++A Y+T A FI+ ISAW R ER+ ++ I G+ +A +G GD Sbjct: 182 TFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSGD 241 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTE-PAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 + VQP+K+AA E +QT+ APF V D + ++L +P +L LA Sbjct: 242 IQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAEG 301 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 D V G+ +L AE QE YG Sbjct: 302 DTDATVEGIDDLRAE--------------YQET---------------------YGQ--- 323 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 P + + Y P + +WSFR+M+G G+L+ + L T +G+ Sbjct: 324 --DPGAAYYSPGDYT-------PYIPVTYWSFRLMIGLGALMAAGAALVLWLTRKGRAPT 374 Query: 419 HRWVLKMALWSLP-LPWIAIEAGWFMTEFGRQPWAIQDILPT-YSAHSALTTGQLAFSLI 476 RW M L SLP L +A GW TE GRQPWA+ ++ T + ++ + S++ Sbjct: 375 ARWFAPMVL-SLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 ++ LY + + EV L+ KY R G + +G Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKGADPFEEPPDPTLRG 471 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 169/504 (33%), Positives = 268/504 (53%), Gaps = 63/504 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + L+R QFA T ++HF FVP+T+G++FL+AI E+IYV TG Y+ +T+F+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EFQFG NWS YS++VGD+FG LA+EAL+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL---RMEMTSFSELVFN 177 +NK H++ WLV+ G+ +SA WIL+AN +MQ+P G + + + + EM F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P +F H V GA I I++W +LR E + ++F + V + +G Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G S + + P+K+AA E ++ APF V+A +Q Q++ L++P +L LA Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 HSLDKPVPGLKNLMAET----YPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGY 353 + + G+K+L E YP ++ + I P + +FR + G +G Sbjct: 301 DKFEGSLKGMKSLQKEMDEKYYP---------VVGKHIDYTPHVPTIYYSFRIMSGSVG- 350 Query: 354 GMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR 413 +L+L+ L+ + + + Sbjct: 351 ---------------------------------------------ILILMALLGTIYSFK 365 Query: 414 GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 + RW L++ W+L + +A GW M E GRQP+ I ++ T S S + + F Sbjct: 366 RTETKKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLF 425 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYA 497 SL++ LYT+ I + Y+ +YA Sbjct: 426 SLLVFCVLYTILGITQ-YIAFRYA 448 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 178/496 (35%), Positives = 260/496 (52%), Gaps = 65/496 (13%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 LSRWQFA T +YHFLFVP+T+GL ++AI++T +G Y + F+GKLF INFA+G Sbjct: 9 LSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINFAIG 68 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TG+ EFQFG NWS YS YVG+IFG PLA+E L+AFF+ESTF+G++ FG R+ + H Sbjct: 69 VVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPRRVH 128 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L WLV+ G+ LSA +IL AN WMQ+P G D T + MT+F ++ N + V H Sbjct: 129 LASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVTLFH 188 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLA-IIGTLQLGDSSAYE- 244 T++A ++TG+ ++ IS W R E FA G+ + +I L +G + Sbjct: 189 TLLASFLTGSALVLGISLWQYHRSTETR---EVFAAGARVSLIVMLISALLMGLDGHIDG 245 Query: 245 --VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ QP+KLAA E + T + + D + F++ IP +L +LAT + Sbjct: 246 QVIAETQPMKLAAGEALYNTSRGASESILTIGNLHD--KPIFSIGIPHVLSLLATDHWNG 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+ L A ++ +Y P Sbjct: 304 VVQGINQLQAA------------------------------------------MVRQYGP 321 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 IP VA +WSFRIM G G++++L+ L +++Q RW Sbjct: 322 G--------------SYIPPVALDYWSFRIMAGIGAVIILIALWGGWLLYHHRLEQSRWF 367 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 K+ALW++PLP+IA GW TE GRQPW + +L T S L+ + +L+ LY Sbjct: 368 AKVALWTIPLPFIANTTGWIYTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTVLY 427 Query: 483 TLFLIAEVYLMQKYAR 498 + + ++ LM +Y R Sbjct: 428 GILAVVDISLMVRYGR 443 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 187/511 (36%), Positives = 265/511 (51%), Gaps = 69/511 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R QFA TA YHF+FVPLT+GL +LAI ET Y + T+FW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA EAL+AFFLESTF+G+ FG +R++ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 +++ WLV FGS LSALWIL AN WMQ P GA D + +T F NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 ++ HT++A + GA MA+SAWYL++ R + A+++ +G+V G + L SSA Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 VA+ QP KLA MEG + +E P + W +++ ++ IP LAT + D Sbjct: 246 VTVAEEQPTKLAMMEGMYDSE--VPPLYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 GL L A YG L AP Sbjct: 304 EYEGLNQLAASAE-------------------------------------YGALDPETAP 326 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR-GKIDQHRW 421 V VF ++ +MV L++L +++ALV TLR GKI +W Sbjct: 327 --------------------VNFVFQTYHLMVAMYGLIMLTVILALVFTLRGGKIQNMKW 366 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ---------DILPTYSAHSALTTGQLA 472 + ++ L S P IAI+AGWF E GRQPW + +L +++ +L Sbjct: 367 LQRLVLISPVFPLIAIQAGWFTAEVGRQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELV 426 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 ++++ + +Y ++A M ++ + GP A Sbjct: 427 ITMVLFLVVYAFLMVAWARTMGRFIKEGPVA 457 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 180/498 (36%), Positives = 265/498 (53%), Gaps = 66/498 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR QF TA+ H++F+PLT+GL +A ME Y T +Y M RFW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA E + AFFLESTF+GL FG + Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +++ +VA G++LS WI+ AN W Q P G + + R EM SF+E++FNP + Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 V+++H + ++T AMFI+AISA+++++ + +A RS +G V G + + G S Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 A V + T+P + W + E NA P LL + H Sbjct: 241 HAQLVGE--------------TQPEKLAAYEAHW---ETEANA-----PLLLFAIPDHEN 278 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 ++ N P G +++L ++ N E L+ F Sbjct: 279 ER------NRFEIGIP----GMLSFLTYDDV---NAEVTGLKEF---------------- 309 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 AA+ + P V F +FR+MV G +L+ ++ Q +G + + Sbjct: 310 --------AAEDR-------PPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKE 354 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 ++K A W LPLP+IA AGW + E+GRQPWA+ +L T A S LT ++ SL + + Sbjct: 355 KLMKTAFWMLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIA 414 Query: 481 LYTLFLIAEVYLMQKYAR 498 +Y+ + VYLM+K R Sbjct: 415 IYSFLVWLMVYLMKKEVR 432 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 179/500 (35%), Positives = 264/500 (52%), Gaps = 62/500 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+RWQF +T +YHF+ VP T+G+ L+A+MET++ TGK + TRF+GKLF +N Sbjct: 10 DSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFLVN 69 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGVATG+ EFQFG WS YS +VGDIFGAPLA EAL++FF+ESTF+G++ FGW +++ Sbjct: 70 FALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGKIS 129 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMT---SFSELVFNPV 179 K H++V WLV G N S LWI+ AN WMQ P GA F+ +T R E+ +F +V N Sbjct: 130 KKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTNST 189 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLR-----------GRE--RNVALRSFAIGSVF 226 + +H V + + A + IS W+++R RE R +A I Sbjct: 190 MWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIMLAA 249 Query: 227 GTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP--------APAPFHVVAWPEQD 278 G L T+ G + QP K+AA EG E + P V+ + Sbjct: 250 GLL----TVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGE 305 Query: 279 QERNAFAL------KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEIS 332 + + + +IP LLG +A +S + + G+ + T L+ + + + Sbjct: 306 NSGSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF----KDK 361 Query: 333 QGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI 392 N + RG +GD+ G ++YAP V PVFWSFR+ Sbjct: 362 APNIDTTNTSGLRG-KGDVA-GYSWAKYAPS-------------------VLPVFWSFRL 400 Query: 393 MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWA 452 M+G G + + ++ L QT G++ R + +AL +LP+P++ + GW MTE GRQP+ Sbjct: 401 MMGVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFI 460 Query: 453 IQDILPTYSAHSALTTGQLA 472 + P A +A T Q A Sbjct: 461 ---VYPNQDAFNADMTVQNA 477 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 174/508 (34%), Positives = 261/508 (51%), Gaps = 66/508 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 ++ L+R+QFA+T +YHF FVP ++G F++AIME++YV T Y+ M +FWG +F ++F Sbjct: 3 ILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLLSF 62 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TGL EFQFG NWS YS ++GDIFGAPLA+EAL++FF+ESTF+GL+ F W+++ Sbjct: 63 AVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKVKP 122 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL W+ +FGS SALWIL AN +MQ+P G ++I R M +F L+ NP + Sbjct: 123 GLHLFFIWMTSFGSLTSALWILTANSFMQHPVG--YEIKGGRAVMVNFGALLKNPQLWYE 180 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSF-----AIGSVFGTLAIIGTLQLG 238 F H ++ + G + I ++A+ LL+ ++ + A + F +G + + IG + LG Sbjct: 181 FGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIALG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D+ + + QP+K AA E + T AP+ +V + + IP L IL+ H Sbjct: 241 DAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILSYH 300 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 V G+ L A+ + YG L Sbjct: 301 KTTGAVTGMNELNAQYKKK-----------------------------------YGKNLD 325 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTL---RGK 415 Y P V +F+SFRIM G+ + LV L+ L+ T + Sbjct: 326 YYPP--------------------VNTLFYSFRIMCAVGAWIFLVSLVGLIMTREKSKKP 365 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP-TYSAHSALTTGQLAFS 474 + Q RW L + LP+I AGWF+TEFGR PW + + S ++ G L S Sbjct: 366 LAQRRWALWCIAITTFLPFIGNTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLLTS 425 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPS 502 I+ L+T I ++L+ R PS Sbjct: 426 NIVYFVLFTTLAITLIWLIVLELRKDPS 453 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 280 bits (716), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 179/510 (35%), Positives = 258/510 (50%), Gaps = 61/510 (11%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +DLSR+QFA T+++H+ FVP T+G ++AI++TI TG ++TRF+G LF IN Sbjct: 8 SALDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+ EFQFG NW +SN+VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 68 FAVGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKIP 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + L W+VA G+ +SA WI+ AN WMQ+P G F+I R MT +V NP Sbjct: 128 AWLSLASIWIVALGTTVSAFWIIIANAWMQHPVG--FEIKNGRAVMTDAWAIVTNPKGLE 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 F H GA F++A+SA++L R SF + + + G + G + Sbjct: 186 WFAHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPA-PFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP+K AA W+T P +VA P N F + +P L LA ++ Sbjct: 246 QSAVRDQPMKYAAFSALWETPAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNFT 305 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 GL L AE +RY Sbjct: 306 GKAKGLNELQAEYE------------------------------------------ARYG 323 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 P N++ P V PV+W+FR+MVG G L+LLV L+ + + +GK+D Sbjct: 324 PG-NYI-------------PFVWPVYWAFRVMVGLGFLMLLVALVYVWRWRQGKLDDPGR 369 Query: 422 VLKMALWSLPL-PWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 + + L ++PL P +A GW TE GRQPW +Q +L T A S L + SL+ Sbjct: 370 LYPLLL-AMPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWV 428 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +Y + +V+L+ + AR G E P+ Sbjct: 429 VYLTLIGLDVFLLTRTARAGMHEPDVETPS 458 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 189/502 (37%), Positives = 270/502 (53%), Gaps = 65/502 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG----KTIYRDMTRFWGKL 58 D + LSRWQFA+T +YHFLFVP+TLGL +A++ET YV T K R + RF+G L Sbjct: 2 DALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGTL 61 Query: 59 FGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW 118 F INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+EAL AFFLESTF+G++ FGW Sbjct: 62 FVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFGW 121 Query: 119 QRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNP 178 +L++ H L W+VAF SNLSA WIL AN +MQ+P G F + R EMT F LV NP Sbjct: 122 DKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVG--FAVRNGRAEMTDFFALVTNP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQL 237 ++ HT+ + T ++A+SAW +L R ++ G+VF + T+ Sbjct: 180 YVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMGS 239 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G A +AQV P+KL+++E W+TE PAPF +VA ++D +N F L +P + Sbjct: 240 GHLQAQYIAQVNPMKLSSVEALWETED-PAPFAIVADIDEDMHKNNFELTVPGAFSFMLY 298 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 ++ VPG+ N + + Y Sbjct: 299 NTPTGAVPGI-NQIQKDYSE---------------------------------------- 317 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 +Y PD +Y+ P V +FWSFRIM+G G L++L+ L A + Sbjct: 318 -KYGPD-------EYR-------PDVTGLFWSFRIMIGLGGLMILLGLAAAYFGFTNRPL 362 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLI 476 LK+ W LPLP++A GW++ E GRQPW + + T A S LT + ++ Sbjct: 363 ACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVWLTMA 422 Query: 477 MIVGLYTLFLIAEVYLMQKYAR 498 LY + IA +++ ++ + Sbjct: 423 GFTVLYLVLAIAALWIAMRFIK 444 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 182/552 (32%), Positives = 271/552 (49%), Gaps = 87/552 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + +D++RWQF +T +YHFL VPLT+GL L+A+++T ++ K Y MT+FWGKLF IN Sbjct: 2 EALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LGVATGL EFQFG WS YS +VGD+FGAPLAMEAL+AFF+ESTF+GL+ FGW++L Sbjct: 62 FILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 HL+ W+ GS +SA +IL AN WMQ+P G +D R MT + N + V Sbjct: 122 AKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVGVTV-VDG-RPRMTDAWAVFTNNTALV 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGR------------------------------- 211 F HT+ F++ IS ++L + R Sbjct: 180 AFPHTIFGALAVAGGFLLGISWYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPGRD 239 Query: 212 --ERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPF 269 + V +RS IG+V +A GT GD + + QP+K+AA E Q + + Sbjct: 240 KTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNGTSFSVL 299 Query: 270 HVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQ 329 + ++ A ++IP LL LA V G+ +L+ E + + L Sbjct: 300 SIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPE-----YQAKYGTNLPD 354 Query: 330 EISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWS 389 G+R +Q +P +A +W Sbjct: 355 NPIYGDRAGQPIQ------------------------------------YVPVMAVTYWG 378 Query: 390 FRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQ 449 FR+M+G G + L +A RG + + +W++++A++ + P+ A AGW TE GRQ Sbjct: 379 FRMMIGFGGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFTELGRQ 438 Query: 450 PWAI------QDILPTY-----SAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYAR 498 P+ + I P + + ++ G+L FSL+ V +Y + LI EV+L+ KY R Sbjct: 439 PFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLLFKYVR 498 Query: 499 LGPSAMQSEQPT 510 G + E T Sbjct: 499 GGVLSAMPELAT 510 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 277 bits (708), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 180/495 (36%), Positives = 261/495 (52%), Gaps = 70/495 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+ LSR QFALT ++H+LF PLT+GL ++A++ Y+ T +Y FW LF N Sbjct: 2 DVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAAN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA E + AFFLES F+ + FGW R++ Sbjct: 62 FAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRVS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDID--TLRMEMTSFSELVFNPVS 180 H + LVA GS SA+WI+ AN W Q P G + R E+T F + V NP S Sbjct: 122 PRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPSS 181 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 V+ +HT+ YV GA F+++ISA+YLLRGR A RSF++ F + + L GD Sbjct: 182 VVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGDM 241 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 SA VA+ QP KLAAMEG + E PA H+ P ++ R A L Sbjct: 242 SARVVAEHQPAKLAAMEGHF--EDGPADLHLFGVPRPEEGRVA----------------L 283 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 +PG +L+ +R+P ++G L+ Sbjct: 284 GVAIPGGLSLLV----------------------HRDPDA-----PIQG-------LASV 309 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 PD A P V F +F +MV G+ + V L+ L +G + + R Sbjct: 310 PPD---------------ARPPVTVPFHAFHLMVALGTAFIAVTLVGLWLKRKGTLFRTR 354 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPT-YSAHSALTTGQLAFSLIMIV 479 W+L + ++++ + + + GW + E GRQPW + ++L T +S ++T GQ+ S+I+ Sbjct: 355 WLLWIFVFAVLGTYASNQLGWIVAEVGRQPWTVWNLLRTEHSFSPSVTAGQVLQSVILFG 414 Query: 480 GLYTLFLIAEVYLMQ 494 +Y L+ +Y+M Sbjct: 415 LVYFGLLLVWLYVMN 429 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 172/506 (33%), Positives = 266/506 (52%), Gaps = 68/506 (13%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R+QFA+T ++HF FVP T+G F++AIMET+YVVT Y+ MT+FWG + ++FA+G Sbjct: 6 LARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLLSFAVG 65 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW--QRLNKY 124 V TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTF+GL+ F W ++++K Sbjct: 66 VVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNKKISKK 125 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H+ WLV FGS +SA+WIL AN +MQ+P G +++ R +MT F L+ N + +F Sbjct: 126 LHVTFIWLVVFGSLMSAMWILIANSFMQHPVG--YEVVNGRAQMTDFFALINNHQFRYEF 183 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRE-----RNVALRSFAIGSVFGTLAIIGTLQLGD 239 H + G + I +SA+ LL+ E + + +S +G + L I + +GD Sbjct: 184 GHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISVMGVGD 243 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + QP+K AAMEG+++ PA + V+AW + ++ F +KIP +L IL S Sbjct: 244 LQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSIL---S 300 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 KP +K + N+E L+++ Sbjct: 301 YGKPSGSVKGM---------------------DTANKE------------------LVAK 321 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--ID 417 Y D P V +F+ FR M G+++L V + L T K + Sbjct: 322 YGQD--------------NYFPMVNLLFYGFRTMAAFGTMMLGVSALGLFLTRPKKPILY 367 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLI 476 H+W+L + + P+++ GW +TE GR PW + + + S ++ L FS Sbjct: 368 DHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVSVASLLFSNT 427 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPS 502 + L++ VYL+ + + GP Sbjct: 428 VYFLLFSCLGAMMVYLVIRELQKGPE 453 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 180/539 (33%), Positives = 263/539 (48%), Gaps = 86/539 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +D+SRWQF +T +YHF+ VPLT+GL L+A+M+T++VVTGK + +T+F+GKLF IN Sbjct: 2 DALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGVATG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 62 FALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL WLVA G N SA +I+ AN +MQ+P GA ++ +T R E+TS L+ N + Sbjct: 122 KLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTALA 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR-------GRERNVALRSFAIG-SVFGTLAI--- 231 F H V ++T F+ + W+++R E VA + ++F + I Sbjct: 182 AFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKHEETARTMFRPVTILAL 241 Query: 232 -------IGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF 284 IG GD + + QP+K+A+ E TE A F ++ Q+ + Sbjct: 242 WVMVASGIGLAITGDIQGKLMFEQQPMKMASAESLCHTETG-ADFSILTVGTQNNCESIT 300 Query: 285 AL-KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQA 343 L KIP L LA + D V G+ + A + GN +P++ Sbjct: 301 QLIKIPGLTSFLADGTFDSTVEGVTEIQAR-------------YEEMYGPGNYKPNLFV- 346 Query: 344 FRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLV 403 +W+FR M+G + L+ Sbjct: 347 ------------------------------------------TYWTFRAMIGWAAGSALL 364 Query: 404 MLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAH 463 ++ L T G++ +W +++ +P P++ AGW TE GRQPW + PT Sbjct: 365 AVVGLWMTRGGRVPDKKWFGWLSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPN-PTGVDM 423 Query: 464 SALTTGQ---------LAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 LT Q + SLI +Y + L+++Y GP + P Sbjct: 424 IRLTVDQGVSNHSPWTVWVSLITFTVVYGALAVVWFTLIRRYTVEGPLEHDAHPPGDDH 482 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 189/519 (36%), Positives = 288/519 (55%), Gaps = 38/519 (7%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D I LSR QFALTA YH++FVP ++G+ F++ ++ T+ +T + + +F+ K GI Sbjct: 2 DPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGIF 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LGV TG+ MEF+FG NWS YS +VG IFG PL +E L AF LESTF+G+ FG RL Sbjct: 62 FVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + + ++ V GS+LS LWIL AN W Q PTG + I R E+T F VFNP+ Sbjct: 122 RAITWISSFFVFIGSSLSGLWILIANSWQQTPTG--YIIQNGRAELTDFMGAVFNPLLVS 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL---GD 239 ++ HT+ + +TGA + A+ A+YLL+ R VA + AIG V LAI +QL G Sbjct: 180 QYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVV--VLAISAVIQLYPTGH 237 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + +A+ QP KLAA EG ++TE AP + ++ + A+ IP LL L+ Sbjct: 238 AEGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGD 296 Query: 300 LDKPVPGLKNLMAETYPR--LQRGRMAWLLMQEISQGNREPHV--LQAFRGLEGDLGYGM 355 + V GL + + L A S+ +R+ + L G++ + Sbjct: 297 WNAEVMGLHDAARYVWYEQVLNNPNFA-------SEKDRKEFIETLMKAHGVDPN----- 344 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 APD N Q + A+P VA +F+++R+M+G G+L +L+ LI ++ L GK Sbjct: 345 -----APDANE----QMVKVLEEALP-VAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGK 394 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFS 474 + RW LK+ + ++PLPW+A EAGWF E GR PW + ++ T + S ++ + + Sbjct: 395 LYDARWFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLIT 454 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSE---QPT 510 LI V +Y++ ++ ++K R GP ++ + +PT Sbjct: 455 LIGFVVVYSVLFYIWLHFVRKLIREGPEPVEGDVTAKPT 493 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 178/535 (33%), Positives = 266/535 (49%), Gaps = 76/535 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + +DL+RWQFA+T +YHF+ VPLT+GL L+A M+T +VVT + +T+F+GKL IN Sbjct: 2 ETLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGVATG+ EFQFG WS YS +VGD+FGAPLAMEAL AFF+ESTF+GL+ FGW RL+ Sbjct: 62 FALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRLS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL WL+A +NLSA +IL AN WMQ+P G ++ T R EM S ++ N Sbjct: 122 KKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLLA 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR----------GRERNVALRSFAIGSVFGTLAII 232 F HT+ A ++ F+ I+ W+++R R+ + +G++ ++ I Sbjct: 182 AFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSGI 241 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA--PFHVVAW-PEQDQERNAFALKIP 289 G GD + + QP K++A EG ++E A V W P D + +P Sbjct: 242 GVGISGDVQGRLMYEQQPGKMSAAEGLCESEEGAAFSLLTVGPWNPTCDDLTR--VISVP 299 Query: 290 ALLGILATHSLDKP---VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 + L T P +PG+ ++ E ++A G Sbjct: 300 GVASFLGTGHFSGPESALPGVNDVQRE---------------------------MEARFG 332 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 + G + Y P + +WSFR+M+G + + L Sbjct: 333 ATDEAGNPI---SYTPPLGI-------------------TYWSFRLMIGLAAFSAALALW 370 Query: 407 ALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD---------IL 457 AL T RG+ + W+ ++A+ ++P P++A GW TE GRQPW + +L Sbjct: 371 ALWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPNPTGIDQVRLL 430 Query: 458 PTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 +A+ G + SLI+ LY + L+ +YA G + E P + Sbjct: 431 TERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYAIEGVPQVHDESPEAR 485 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 178/530 (33%), Positives = 254/530 (47%), Gaps = 84/530 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+ LSR QFA T ++H+LF PLT+GL +L +E +++ T IY RFW K+FG+N Sbjct: 2 DVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGLN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ L FGW R+ Sbjct: 62 FALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRVG 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT------LRMEMTSFSELVF 176 H T +VA G S++WI AN W Q P G LR E+ F +VF Sbjct: 122 PKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMVF 181 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 NP + + +H + +V GA F+M+ISAWYLL+ R A +SF +F T++ L Sbjct: 182 NPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQLA 241 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 G A VA QP KLAAMEG + T+ AP ++ WP+ ++ + + Sbjct: 242 SGHFQAEGVAHHQPAKLAAMEGLYTTQKQ-APVYLFGWPDSQTKQVKYGI---------- 290 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 P+PG+ +LM N+E RGL+ Sbjct: 291 ------PIPGMLSLMVT------------------GDSNQE------VRGLD-------- 312 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 Q P V F ++ IM+ G + ++ + RG + Sbjct: 313 ----------------QLDPIWGTPPVWITFQAYHIMIAIGMIFIVSCTYSCFLLYRGTL 356 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ----DILPT------YSAHSAL 466 + RWVL +++L L ++A E GW E GRQPW + D LPT + A+ Sbjct: 357 YETRWVLWYHVFALGLAFLANEMGWVSAEVGRQPWIVYPTLVDGLPTGGLRTSAALSEAV 416 Query: 467 TTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP---SAMQSEQPTQQQ 513 Q+ S+I +Y L + + L+ + GP + E P Q Sbjct: 417 IAEQVLGSIIFFAIVYGLLFVLWITLLHQKISHGPDDHAKESGEHPRSDQ 466 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 199/314 (63%), Gaps = 3/314 (0%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+ LSR QFA+TA +HF+F PLT+GL +L+ +M+T Y+ TG+ +Y+ M+RFW K+F I+ Sbjct: 2 DVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAIS 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA EA+ AFFLES F+G+ +G R++ Sbjct: 62 FVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRVS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K + + +VA GS LSALWI+ AN W Q P G H I R E+ F + N + Sbjct: 122 KKVYWFSSLMVAVGSTLSALWIIIANSWQQTPAGYH--IVNGRAELIDFKAALLNASTVP 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 +++HTV +TGA F++AISAWYLLR RE A +S +A + + +G A Sbjct: 180 RYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMHA 239 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VAQ QP KLAA+EG ++TE A + P++ F L IP L +LAT D Sbjct: 240 VQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIPKALSLLATGDPDG 298 Query: 303 PVPGLKNLMAETYP 316 V GLK E P Sbjct: 299 EVQGLKAFPEEERP 312 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V F +F +MV G+L +L + + +G + +R LK+ALWS+PLP+IA E G Sbjct: 312 PPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRLFLKLALWSVPLPFIANEVG 371 Query: 441 WFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 W E GRQPW + +L T S + Q+ S+I+ V +Y+L + YL++K Sbjct: 372 WIAAEVGRQPWIVYKLLRTVDGISYTVPAWQILASIILFVLIYSLLFVVWFYLLRKKLAA 431 Query: 500 GPSAMQSEQPTQQQG 514 GP A + + G Sbjct: 432 GPEAFATANGVAKSG 446 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 180/527 (34%), Positives = 258/527 (48%), Gaps = 82/527 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +D+SRWQF +T +YHF+FVPLT+GL +LA+M+T +VVT + +TRF+GKLF IN Sbjct: 2 DALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFF ESTF+GL+ FGW RL Sbjct: 62 FAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL W+VA N SA +I+ AN +MQ+P GA ++ ++ R E+T F L+ N + Sbjct: 122 RLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAVW 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVA---------LRSFAI-GSVFGTLAII 232 F H V +T F+ +SA+ ++R +RNV R AI GS+ +A + Sbjct: 182 AFQHAVAGALLTAGAFVAGVSAFLMVRA-QRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALL 292 G GD + QP+K+A+ E T P + + + L +P +L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GILATHSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 LA + G+ +L A+ R G Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERFGPG------------------------------ 330 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 Y P++ VT ++A M+G + + L+ + T Sbjct: 331 -------DYRPNL-FVTYWAFRA------------------MIGLLLVPVAFALVTVWLT 364 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI-----------QDILPTY 460 RG+I RW + ++P P++A AGW TE GRQPW + + Sbjct: 365 RRGRIPHQRWYGWAGVLTIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRMTVQDGV 424 Query: 461 SAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSE 507 S HSA G + FSL+M +Y + LM++Y GP SE Sbjct: 425 SNHSA---GMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQEHDSE 468 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 172/511 (33%), Positives = 246/511 (48%), Gaps = 83/511 (16%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 V +LSR QFA+TA++H L+ LT+ L L ++E +++ TG +Y RFW KL +NF Sbjct: 5 VANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLLVLNF 64 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV +G+ MEFQFGTNW+ +S Y G G L E MAF LE+ FVG+ GW R+ + Sbjct: 65 AVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWGRVPR 124 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL T +VA GS++SA WI+ AN WMQ P G + + ++E+T + +FNP Sbjct: 125 GVHLFATSMVALGSSISAFWIMVANSWMQTPAG--YAVVNGKIEVTDYLVAIFNPDMVWG 182 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSS 241 H +A TG I ISA+ L R R RSF I L + LQ LGDSS Sbjct: 183 VSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIA--LSVLVVAAPLQIWLGDSS 240 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 V + QP K AA+EG W T + A + ++AWP+Q +RN ++L++P +L +L THS Sbjct: 241 GVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDWSLEVPGMLSVLGTHS 300 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 L V GL + E P + P + AFR + G Sbjct: 301 LHGQVKGLTDFAREDQPPMI------------------PLLYYAFRAMAG---------- 332 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID-- 417 +G +LL ++ RG +D Sbjct: 333 ----------------------------------IGLCFMLLAFWTAYALRKARGSLDAL 358 Query: 418 ------QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL 471 WVL +PLP++A+EAGW + E GRQPW + +L T A S + + Sbjct: 359 LARRKLLLAWVL-----CIPLPYVAVEAGWIVREVGRQPWVVYGLLRTSQAASTVAPSAV 413 Query: 472 AFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 + S+ M Y + L+ L ++ R GP Sbjct: 414 SLSMAMFFAFYAVLLVTFFVLACRWLRKGPD 444 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 163/505 (32%), Positives = 253/505 (50%), Gaps = 73/505 (14%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 LSR QFA T +H LF ++GL L I E ++++T Y + +FW K+F + F +G Sbjct: 7 LSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFALTFGMG 66 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R+NKY H Sbjct: 67 VVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGRINKYVH 126 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L + + G LSA WIL+AN WMQ P G ++ + E+ S+ ++FNP +++H Sbjct: 127 FLANFTIFAGVTLSAFWILSANSWMQTPDGVNY--INGKFEVYSWYHVIFNPSVIPRYIH 184 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 +MA Y++ M I+ +SA+Y+++ + + A V + +G L +GD EV Sbjct: 185 MLMAAYLSTLMVILGVSAYYIIKDKHHSFAKTCIKFSIVSILILSVGQLAVGDDVGREVH 244 Query: 247 QVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPG 306 + QP+K AA+EG W T+ APF V A+P + QE+N F+++IP L ++ TH LD + G Sbjct: 245 EHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHELDGELIG 303 Query: 307 LKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNH 366 LK++ P R P V F +G G L+ Sbjct: 304 LKSV-----PEKDR-----------------PVVAVVFYSFRIMVGIGTLM--------- 332 Query: 367 VTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMA 426 I++G +LL R K+ +W L++ Sbjct: 333 -------------------------ILMGVVGTILLA---------RKKLQTSKWFLRLC 358 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFL 486 + PL ++AI GWF EFGRQPW + +IL T + S + Q+ SL I+ +Y F+ Sbjct: 359 TLTTPLGFVAIITGWFTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIIIVY--FV 416 Query: 487 IAEVYLMQKYARL---GPSAMQSEQ 508 I + + R+ GPS E+ Sbjct: 417 IFGFFYFRYLFRIINGGPSTGGEER 441 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 170/523 (32%), Positives = 279/523 (53%), Gaps = 21/523 (4%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKL-FGINFA 64 D +R +FAL+ + H +FVPL +GL+ + AI ET+YV Y+ +F GKL I F Sbjct: 8 DSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIVFV 67 Query: 65 LGVATGLT-------MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 L + LT + N S +S YVG + G ++ L T V LF+ G Sbjct: 68 LIITGILTPPMPEDWQQLDIFIN-SVFSEYVG-LLGTIVST----GMMLWLTAVSLFYVG 121 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA-HFDIDTLRMEMTSFSELVF 176 W+ L HL +TWL+ F + L ++ NGWM P+ A FDI+T+ + +S E+V Sbjct: 122 WRYLPAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIVS 181 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 P++ +F H ++ G + ++++S +YL + R++ A IG+ G + + Sbjct: 182 TPMASTRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAIF 241 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 GD +V Q QP+KLA +E W+T+ A + A P+Q E N F +KIP +LG + Sbjct: 242 SGDIHGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWML 301 Query: 297 THSLD-KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 + + D +PV G+K L AE R++ G +A + S + + + + + DLGY Sbjct: 302 SGTDDTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYAE 361 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 L+ +Y PD+ VT Q + A + V +F+SFR+MVG G +LL+ + ++G+ Sbjct: 362 LVRKYNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKGR 421 Query: 416 IDQ-HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL-AF 473 ++ +LK++ ++LP+P+IA +GW ++E+GRQPW I ++PT + TGQ F Sbjct: 422 VNSVSTRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQTNGF 481 Query: 474 SLIMIVGLY-TLFLIAEVYLMQKYARLGPS-AMQSEQPTQQQG 514 L ++ Y LFLI V ++ ++ + GP A+ E+ Q G Sbjct: 482 QLPTLLMSYAALFLILGV-ILARWIKQGPKPAISVEKVCLQAG 523 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 180/558 (32%), Positives = 258/558 (46%), Gaps = 103/558 (18%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +D+SRWQF +T +YHF+ VPLT+GL ++AIM+T++ VTG + T+F+GKLF IN Sbjct: 2 DALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGVATG+ EFQFG NWS YS +V D+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 62 FALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL WL A G SA +I+ AN WMQ+P G +D + R M F ++ N + Sbjct: 122 RKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTLA 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALR-SFAIGSVFGTLAIIGTLQL---- 237 F H + ++T F+ A+ W++ R R LR + G G Q+ Sbjct: 182 AFPHVLAGAWLTAGTFVAAVGIWWMARNTWRAKKLREAIETGDTSGMPKTTSPSQIDATP 241 Query: 238 --------------------------------GDSSAYEVAQVQPVKLAAMEGEWQTEPA 265 GD A + + QP+K+A+ E + A Sbjct: 242 EDLERDARQLWRPVTRFSLWIIMISGVALFITGDLQAQIMFKQQPMKMASAESLCDSTTA 301 Query: 266 PAPFHVVAWPEQDQERNA-FALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMA 324 APF V++ Q+ N ++IP +L LA H D P+ G+ L + LQ Sbjct: 302 GAPFSVLSIGRQNNCDNVDHVVEIPGMLSFLADHRFDTPLQGVNQLQVQYQEALQ----- 356 Query: 325 WLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVA 384 M +AP++ VT Sbjct: 357 ------------------------------MPGQNFAPNL-FVT---------------- 369 Query: 385 PVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMT 444 +W FR M+ ++V L L T R ++ + R +AL +P P++A +GW T Sbjct: 370 --YWGFRAMITWALGSVVVALGGLWLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIFT 427 Query: 445 EFGRQPWAI----QDILPTYSAH-------SALTTGQLAFSLIMIVGLYTLFLIAEVYLM 493 E GRQPW + QD L H S T + +LI LY + L Sbjct: 428 EMGRQPWVVAPNWQDNLDPTRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFMLQ 487 Query: 494 QKYARLGPSAMQSEQPTQ 511 ++Y GP+ + P + Sbjct: 488 RRYVIEGPATYDAIPPDE 505 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 191/317 (60%), Gaps = 4/317 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + LSR QFA+TA +HFL+ PLT+GL ++ ME YV +G Y MT+FW KLF Sbjct: 3 FDALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAA 62 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA E + AFFLES F+ + FGW R+ Sbjct: 63 TFSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRV 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHF--DIDTLRMEMTSFSELVFNPV 179 + HL + +V FGS +SA WI+ AN WMQ P H + +R E+ F +VFNP Sbjct: 123 SPKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPS 182 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + +F H ++ ++ G +M+I+A+Y+L+ R A +SF + V ++ I L +G Sbjct: 183 TVSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGH 242 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SA VA+ QP KLAA+EG ++TE AP ++ P ++ E + IP +L L Sbjct: 243 RSAEVVAEYQPSKLAALEGLFKTEDG-APLYLFGHPSEETEET-IGIAIPGMLSFLVHQD 300 Query: 300 LDKPVPGLKNLMAETYP 316 V GL E P Sbjct: 301 FSATVTGLDKFAKEDRP 317 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 1/135 (0%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V F ++ IMV G + + L L RG + +++++L++ ++S+ P+IA + G Sbjct: 317 PPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFMLQVFIFSVFGPYIANQTG 376 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTG-QLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 W E GRQPW + ++L T A S +G ++ SL + LY L L V++M + + Sbjct: 377 WLSAEIGRQPWIVYNMLRTADAISKSVSGAEVLTSLFLFTLLYFLLLFVWVFIMDRKIKA 436 Query: 500 GPSAMQSEQPTQQQG 514 GP + + P G Sbjct: 437 GPEDVDGDIPILDAG 451 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 176/510 (34%), Positives = 255/510 (50%), Gaps = 77/510 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + + LSR QFA+TA++H L+ LT G+ L I+E +++ T Y RFW +L+ +N Sbjct: 7 NTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYVLN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GVATGL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ Sbjct: 67 FGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVP 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H L T LVA G+NLS WIL+AN W+Q P G F +D + + + + NP Sbjct: 127 PLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIF-VDG-KFVVQDYFAAIANPFMVN 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDS 240 F+H A T I ISAW +L GR+ RS + + + + LQ+ G Sbjct: 185 SFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQV--ILVVVMAVAPLQIFIGHL 242 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 SA +V+ QP KLAAME W+T PA PA + VVA P E+N + L I Sbjct: 243 SAEQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSI---------- 292 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 PG + + E P+L + ++G L Sbjct: 293 ------PGALSYILELKPQLDKP-------------------------IQG-------LK 314 Query: 359 RYAP-DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK-- 415 +AP D + V +++SFRIMV G +M + ++Q LRGK Sbjct: 315 DWAPVDRPRM---------------VGLIYYSFRIMVAIGLFFAALMAVTVLQWLRGKLK 359 Query: 416 ---IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLA 472 I Q +W+L+ +++ PL ++A+E GW + GRQPW + + T + S L G++ Sbjct: 360 PEIISQQKWLLRAWVFAAPLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEIL 419 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 FSL + +Y +FLIA +Y + R GP Sbjct: 420 FSLTGLSVMYIVFLIATLYFGSRIIRNGPD 449 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 174/509 (34%), Positives = 253/509 (49%), Gaps = 75/509 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSRWQFALTA++H L+ LT G+ L ++E +++ T Y RFW KL+ +N Sbjct: 7 DTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYILN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GVA+GL M FQFG NW+ +S VGD FG L EA MAF LE++F+G+ FGWQR+ Sbjct: 67 FGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRVP 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H + T VAFG+NLS WIL+AN W+Q PTG F R++ + + + NP Sbjct: 127 PVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVFVEGKFRVQ--DYFQAIANPFMVK 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDS 240 F H A T I ISAWYLL+ R N +S + V +I LQ+ G Sbjct: 185 SFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMAL--VIAPLQVFVGHL 242 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 SA +V QP KLAAME W+T PA PA + V+A P + E N F +KI Sbjct: 243 SAEQVYHYQPAKLAAMEALWETVPAGTPADWSVIALPNEAAETNTFEVKI---------- 292 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 P L + + P+L + ++E + +R PH+ Sbjct: 293 ------PALLSYLLALRPKLDTPILG---LKEWAPSDR-PHL------------------ 324 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR----- 413 V +++SFR+MV G L + ++ + R Sbjct: 325 ------------------------VGLIYYSFRLMVAIGLYLAALAIVTIFVWWRTGLEG 360 Query: 414 GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 ++ ++W+ +++ PL ++A+EAGW + GRQPW + L T A S L + F Sbjct: 361 DRLRNYQWLWWGWIFAGPLGYLAVEAGWIVRCVGRQPWIVYGQLRTAEAASDLPPQVVLF 420 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 SL +V LYT+F A ++ + + GP+ Sbjct: 421 SLSGLVALYTIFFFAALFFGSRIIQKGPN 449 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 167/488 (34%), Positives = 246/488 (50%), Gaps = 77/488 (15%) Query: 25 LTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFY 84 LT G+ L ++E +++ T Y RFW KL+ +NF +GVA+GL M FQFG NW+ + Sbjct: 6 LTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGLNWAPF 65 Query: 85 SNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWI 144 S VGD FG L E MAF LE++F+G+ FGW R+ H + T LVAFG+NLS WI Sbjct: 66 SESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANLSTFWI 125 Query: 145 LNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISA 204 L+AN W+Q P G F ++ + + + NP F+HT A T I ISA Sbjct: 126 LSANSWLQTPAGGEFIAGKFVVQ--DYFQAIANPFMVNSFLHTFFATLETSLFVIGGISA 183 Query: 205 WYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAYEVAQVQPVKLAAMEGEWQT 262 WY++ R LRSF + + +I LQ +G SA +V QP KLAAME +W+T Sbjct: 184 WYIINQRRTEFFLRSFKV--ILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQWET 241 Query: 263 EPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQR 320 PA PA + ++A P E+N + +K VPG + + E +L Sbjct: 242 VPAGEPADWSLLAVPNNKVEKNEWEIK----------------VPGALSYLLELKSKLD- 284 Query: 321 GRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAI 380 Q +GL+ +++ R Sbjct: 285 ---------------------QPVKGLK----------------------EWEPKNR--- 298 Query: 381 PQ-VAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK-----IDQHRWVLKMALWSLPLPW 434 PQ V +++SFRIMVG G L +MLI ++Q L GK I Q +W+++ +++ PL + Sbjct: 299 PQMVGLIYYSFRIMVGIGLFLAGLMLITVIQWLSGKLSTTTITQQKWLMRAWIFAGPLGY 358 Query: 435 IAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQ 494 IA+E GW + GRQPW + L T A S + G++ FSL+ ++ +Y +F +A +Y Sbjct: 359 IAVETGWIVRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGS 418 Query: 495 KYARLGPS 502 + R GP+ Sbjct: 419 RIIRKGPN 426 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 177/527 (33%), Positives = 263/527 (49%), Gaps = 77/527 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+D++RWQF +T +YHFL VPLT+GL L+A+M T++V TGK + MTRFWG+++ IN Sbjct: 7 DVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLIN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LGVATGL EFQFG WS YS +VGD+FG+ LA+EAL+AFFLESTF+GL+ FGW R+ Sbjct: 67 FVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRIP 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL W GS +SA +I+ AN WMQ+P G D T R F ++ N + Sbjct: 127 KELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTALA 186 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR---------GRERNVALRSFAIGSVFGTLAIIG 233 F H V+A + ++ I W+L R + V RS +G A + Sbjct: 187 AFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFVL 246 Query: 234 TLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE--QDQERNAFALKIPAL 291 GD + + QP+K+++ E +TE APAPF V+AW + ++ + ++ IP L Sbjct: 247 VALTGDWQGKLMYEQQPLKMSSAEALCETE-APAPFSVLAWSKLGSNECDDVHSITIPGL 305 Query: 292 LGILATHSLDKPVPGLKNLM-------AETYPRLQRGRMAWLLMQEISQGNREPHVLQAF 344 + LA VPG+ L ETYP +P A Sbjct: 306 VSFLAHGDFSSAVPGVNQLQEEYAAVYGETYP-------------------DDPSRFGAL 346 Query: 345 RGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVM 404 G E D P +A +WSFR+M+G G++ V Sbjct: 347 AGEEIDY----------------------------TPLLAVSYWSFRLMIGMGAVSAGVA 378 Query: 405 LIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ---DI----- 456 AL T +G++ + + +L ++ P++A GW TE GRQP+ + D+ Sbjct: 379 AYALWATRKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQ 438 Query: 457 ---LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 + +T ++ SL ++ +Y + E++L+ ++ R G Sbjct: 439 TYFFTAQAVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRG 485 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 182/520 (35%), Positives = 267/520 (51%), Gaps = 90/520 (17%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+RWQF +T +YHFLFVPLT+GL +A ++T + TGK Y +T+F+GKLF IN Sbjct: 2 DALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 62 FAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL W GSNLSA +IL AN WM++P G +++ + MT ++ N + Sbjct: 122 KRVHLATIWAAVIGSNLSAYFILAANAWMKHPVG--YEVVDGKARMTDLWAVLTNSSALA 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGR----ERNVALRSFAIGS---------VFGTL 229 + H V A +V F++A+ +++LR R +R +R A V + Sbjct: 180 QVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTAI 239 Query: 230 AIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIP 289 A + GD SA + + QP+KLAA EG + + A APF V +++P Sbjct: 240 AGVVVAGSGDMSAKLLYEQQPMKLAAAEG-LRHDTAGAPFSPVP-----------GVEVP 287 Query: 290 ALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEG 349 LL LAT+ V G ++L A E Sbjct: 288 MLLSFLATNDPSAVVHGTEDLQAR---------------------------------FEK 314 Query: 350 DLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG------SLLLLV 403 + G G Y+ P + VFWSFR+M+ G S+L L Sbjct: 315 EFGPG----------------DYR-------PNLPVVFWSFRVMITFGMATVALSVLGLW 351 Query: 404 MLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ-DILPTYSA 462 + + R + W+ + + +LPLP IA+ +GW ++E GRQPW +Q ++L S Sbjct: 352 LTRKRRRDPRPPRELPTWLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAASV 411 Query: 463 HSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 ++ ++A SL + LY + +AE L+ ++ + GP Sbjct: 412 SPGVSLTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPE 451 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 254 bits (648), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 118/145 (81%), Positives = 132/145 (91%) Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SSAYEVAQ+QPVKLAAMEGEWQTEPAPAPFH++AWP+Q+QERNAFA+KIPALLGILATHS Sbjct: 1 SSAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHS 60 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 LD PVPGLKNLM + PRL+RGR AWLLMQEI+QGNR P VL AF +EGDLGYG+LL++ Sbjct: 61 LDTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAK 120 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVA 384 YAPDMNHVT QY+AA RGAIPQVA Sbjct: 121 YAPDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 165/461 (35%), Positives = 244/461 (52%), Gaps = 67/461 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DVID++RWQF +T +YHF+FVPLT+GL L+A+M+T + VTGK + TRF+G + IN Sbjct: 2 DVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+E L+AFFLES F+GL+ FGW ++ Sbjct: 62 FAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKIP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H W+VA +N+SA +I+ AN +MQ+P GA ++ +T R E+T L+ NP + Sbjct: 122 GWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTALA 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFG----TLAIIGTLQLG 238 F H V +T F++ I W+L+R ++ + R F G +A+I G Sbjct: 182 AFPHAVAGSLLTAGTFVVGICGWWLIRASKQE-SHRMFRPALWMGWWTTVIALIAVAVTG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D A + Q QP+K+A+ E TE P + D + +++P +L Sbjct: 241 DIQAKLMFQQQPMKMASAESLCHTETDPNFSILTIGTHNDCDSVIHLIEMPWVL------ 294 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 P L GR + ++ + LQA + + YG Sbjct: 295 -----------------PFLAEGRFTGVTLEGVQD-------LQA----KAESLYGP--G 324 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVG--CGSLLLLV---MLIALVQTLR 413 YAP++ VT +WSFR M+G GSL + +L+ +T Sbjct: 325 NYAPNL-FVT------------------YWSFRAMIGLMVGSLAIAFISWLLLRKGRTPT 365 Query: 414 GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ 454 G+I RW +L +P+P++A AGW TE GRQPW + Sbjct: 366 GRIA--RWFAWGSLAVIPMPFLANSAGWIFTEMGRQPWVVH 404 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 165/523 (31%), Positives = 249/523 (47%), Gaps = 82/523 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFALT +H F L++GL L I+E +++ TG Y RFW F IN Sbjct: 6 DPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G+ TG+ +EFQFGTNW +S +G+ FG L E MAF LE+ F + FGW+R+ Sbjct: 66 FAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKRVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H T +VAF ++LSA WIL AN WMQ PTG H + ++ + +F+P Sbjct: 126 PKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGGHIENGVFIVD--DYLAAIFSPDLPF 183 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 F+H +A + A+S +++ G+ L+SF I ++ + +GD + Sbjct: 184 AFLHMHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGDQNG 243 Query: 243 YEVAQVQPVKLAAMEGEWQTEP--APAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 E+A++QP K+A +E W+T P A +++VAWP+ + ERN+F+++IP +L +L THS Sbjct: 244 LEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVTHSP 303 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 VPG ++E + +R P ++ Sbjct: 304 TGTVPG---------------------LKEFPKEDRPPIIIP------------------ 324 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 F+SFR MVG G ++ V L + + +G + Sbjct: 325 --------------------------FYSFRFMVGIGFAMVGVALWTVWEWRKGGLRPEN 358 Query: 421 -----WVLK----MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL 471 W+ + MAL ++A+ GW E GRQPW + ++ T HS LT GQL Sbjct: 359 APGRVWLFRAWGAMALGG----YLAVILGWITREVGRQPWMLYGLIRTADGHSNLTVGQL 414 Query: 472 AFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 SL V YT+ V M K + GP + P +G Sbjct: 415 WTSLAGFVVAYTILGCVFVIFMAKLFKKGPDMEELPPPGHARG 457 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 178/504 (35%), Positives = 256/504 (50%), Gaps = 67/504 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+R QFA T++YHF FVP+T+G+ L+A++ T + G + + RF+G L I+ Sbjct: 2 DQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLIS 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 ++GV TGL EFQFG NWS YS +VGD+FGAPLAME L AFFLESTF+GL+ FG+ L Sbjct: 62 ISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HLL W+VA G+ LSAL+I+ AN WMQ P G + DT R ++TS ++ NPV Sbjct: 122 RRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFIW 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFG-TLAIIGTL---QLG 238 ++H ++ + G ++A+SAW L R + + F + G T +IGT+ +G Sbjct: 182 GYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHVG 241 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVV---AWPEQDQERNAFALKIPALLGIL 295 QP+K+AA E WQT P F ++ W D ++IP LL +L Sbjct: 242 GQLGINETSYQPMKIAAAEANWQT-CQPCSFSMLQIGGWTADDPPTK--IIEIPHLLSLL 298 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 AT + + V GL L E Y Q+ G P+V Sbjct: 299 ATGTWNGEVQGLTPL-NEQY------------QQQYGPGEYVPNVF-------------- 331 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 QY WS R+M +L+ L + + R K Sbjct: 332 --------------IQY---------------WSMRVMAYLATLVALFGVWGIWLWWRKK 362 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSAL-TTGQLAFS 474 + R L +A W + P++ AGWF+TE GRQPW +Q ++ T S + GQ+ S Sbjct: 363 LATARVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVS 422 Query: 475 LIMIVGLYTLFLIAEVYLMQKYAR 498 L ++V LYT + LM ++AR Sbjct: 423 LSIVVVLYTTIGVIAAILMLRHAR 446 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/318 (40%), Positives = 196/318 (61%), Gaps = 3/318 (0%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+ L+R QFALT ++H+++ L++GL ++ I+E +Y+ T IY M +FW K+F + Sbjct: 2 DVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFALT 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ + FGW R++ Sbjct: 62 FAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRVS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPVS 180 H T +V G++ SA+WI+ AN WMQ P G + + R E+T F E+VFNP S Sbjct: 122 PKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPSS 181 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 ++ H ++ ++ GA +++ISA+YLL+ + + A +S IG + I GDS Sbjct: 182 MIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGDS 241 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S VA+ QP KLAAME +QTE P + ++++ +A++IP LL L+ Sbjct: 242 SGKVVAKYQPTKLAAMEALYQTESG-VPLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGDF 300 Query: 301 DKPVPGLKNLMAETYPRL 318 + + GL + E +P + Sbjct: 301 NAEMKGLDQVNPEDWPNV 318 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 2/136 (1%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V +F +R+M+ +L+ + + L + ++ HR +L + ++S +A +AG Sbjct: 316 PNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYKKTLENHRGILWLMVFSAIYAQVANQAG 375 Query: 441 WFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 W+ E GR PW + +L S ++ Q+ S+IM + +Y L I VY++ + + Sbjct: 376 WYSAETGRYPWLVYGLLRISEGLSKSVKANQVLGSIIMFMCVYLLLFILFVYMLNEKVKH 435 Query: 500 GP-SAMQSEQPTQQQG 514 GP ++ + T G Sbjct: 436 GPEEEIEDDSSTPYHG 451 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 158/509 (31%), Positives = 241/509 (47%), Gaps = 69/509 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFA T YH L+ T+G+ + + ++ +++ T +Y+ + RFW K+F + Sbjct: 2 DQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFALA 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV TG+ + +Q G NWS Y+ D G ME L AFFLE+ F+G+ +G +R+ Sbjct: 62 FGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERVG 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H + +VA G+ LSA WI++AN WMQ PT D R T F +VFNP Sbjct: 122 EKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFTTTADG-RFVATDFWGVVFNPSMPY 180 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGR--ERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + H + A ++TG + ++A+++ RGR ++ A ++F+I + + + +GD Sbjct: 181 RLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGDQ 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+KLAA+E W T P +++AWP++ ERN +AL+IP L ++ THSL Sbjct: 241 HGLNTRKYQPMKLAAIEARWDTA-RRVPINLIAWPDEKAERNDYALEIPLLGSLILTHSL 299 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + V GLK E+ R P VL F +G GM Sbjct: 300 NGEVKGLK---------------------EVPPSERPP-VLPVFLAFRVMVGCGM----- 332 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 LLLLV L RG++ R Sbjct: 333 --------------------------------------LLLLVAFTGLYLRWRGRLYTTR 354 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W + +PL +IA AGW +TE GRQP+ I T A S + TG +A S+ + Sbjct: 355 WYQIACMGCVPLGFIATLAGWVVTEVGRQPYVIYGHFRTAEAVSPIATGAVASSMAIAFV 414 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQP 509 LY L+ + + A GP + P Sbjct: 415 LYNCLLLGFFWYAGRLAWRGPMSGLPTHP 443 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 178/551 (32%), Positives = 270/551 (49%), Gaps = 57/551 (10%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSRWQF +T +YHF+FVPLT+GL L+A+M+T + VT K + TRF+G + +N Sbjct: 17 DTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLVN 76 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+ EFQFG NWS YS VGD+FG PLA+E L+AFF+ES F+G++ FGW R+ Sbjct: 77 FAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRIP 136 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H L W VA NLSA +I+ AN +MQ+P GA F+ +T R E+T L+ NP + Sbjct: 137 TWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTALA 196 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR-GRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H V ++T F++ +S W+L++ R + + G L L ++ Sbjct: 197 AFPHAVAGSFLTAGTFVLGVSGWWLIKDARAKAKTATTTQDG-----------LALDNAP 245 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQ---ERNAFAL----KIPALLGI 294 A E A AA + AP+ + A + D+ R A + I + +G+ Sbjct: 246 AAE-ASASGTNTAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGV 304 Query: 295 LATHSLDKPV----PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREP--HVLQAFRGL- 347 T + + +K AE+ + ++ ++ + N E HVL+A L Sbjct: 305 FITGDIQAKLMFVQQPMKMASAESLCHTETDP-SFSILTIGTHNNCESVIHVLKAPFVLP 363 Query: 348 ---EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVM 404 EG G+ L D+ A Y P + +WSFR M+G L + Sbjct: 364 FLAEGKFS-GVTLQGVM-DLQEKAEALYGPGNYS--PNLFVTYWSFRAMIGLMVGSLALA 419 Query: 405 LIALVQTLRGKIDQHRWVLKMA---LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTY- 460 A + T +G++ + +W + L ++P P++A +GW TE GRQPW I + Sbjct: 420 FFAWLFTRKGRLPKGKWATIFSWGCLAAIPFPFLANSSGWIFTEMGRQPWVIHPNPESVG 479 Query: 461 ---------------SAHS--ALTTGQLAFSLIM-IVGLYTLFLIAEVYLMQKYARLGPS 502 S H + + F+LI I+ + +LI V L A GP Sbjct: 480 DPRTESIRMLVDHGGSGHEPWVVIVTLVGFTLIYGILAVVWFWLIRRVVLDGPPAESGPE 539 Query: 503 AMQSEQPTQQQ 513 A+ SE + Sbjct: 540 AVASESTEDDE 550 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 170/519 (32%), Positives = 260/519 (50%), Gaps = 74/519 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + +L+RWQF +T +YHF VPLT+GL L+A+M+T +G ++ T F+GK+ IN Sbjct: 2 EAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGVATG+ EFQFG NWS YS +VGDIFGAPLA EAL+AFFLESTF+GL+ FG RL+ Sbjct: 62 FALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRLS 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMT---SFSELVFNPV 179 H + WL+A G+ LS +IL AN +MQ PTGA + T R+E+ F ++F+ Sbjct: 122 PRLHNMCIWLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFSET 181 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRER----NVALRSFAIGSVFGTLAIIGTL 235 S F HT+ A ++ + + W++ R R + A + + + G +A++ + Sbjct: 182 SLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLVSS 241 Query: 236 QLGDSSAY----EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPAL 291 + S + V +QP K AAM G E + V+A D + L P Sbjct: 242 CIAIGSGHFMGQHVKDIQPAKAAAMMG--VCESGESHDLVIAMWTSDCDGPQLTLPFPG- 298 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 GL++ MA + F G E L Sbjct: 299 --------------GLESFMATNH----------------------------FSGKESFL 316 Query: 352 GYGMLLSRYAPDMNHVTAAQYQ---AAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIAL 408 + D+N A+Y + + P + FWSFR M+G G L L M I Sbjct: 317 -------KGLDDVNAELKAKYADVYGSDQDYRPNLTVAFWSFRAMMGIG-FLGLAMSIFG 368 Query: 409 VQTLRG-KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD------ILPTYS 461 + +LRG KI++ + ++ L ++PLP++ GW +TE GRQPW + ++ Sbjct: 369 LYSLRGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQG 428 Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 ++++ G + S+ + LY+ + + L+++YA G Sbjct: 429 LSNSVSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEG 467 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 118/276 (42%), Positives = 179/276 (64%), Gaps = 3/276 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + LSR QFA+T ++H++F P+T+GL +L +E +++ T +Y +FW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA E + AFFLES F+ + FGW + Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHF-DID-TLRMEMTSFSELVFNP 178 + H L + +VA G++ SA+WI+ AN WMQ P G +++ ++ +TSF ++VFNP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + + H + ++ GA ++++SAWY+L+ R + +SF + V G + + G G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAW 274 DSSA EV+ QP K AAMEG ++ AP H++ W Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMESG-APQDLHLIGW 275 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 51/94 (54%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P + PVF+SF +M+ G L + L L RG + Q RW+L ++S+ P IA +AG Sbjct: 316 PPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFSVLGPQIANQAG 375 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFS 474 W + E GRQPW + IL T A S T A S Sbjct: 376 WAVAELGRQPWIVYGILRTEHAVSPTLTAAEALS 409 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 182/316 (57%), Gaps = 3/316 (0%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + IDL+R QFA T +H LF +T+GL LA++E +++ T +YRD+ FW K+F +N Sbjct: 5 EAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAVN 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV +GL M +QFGTNWS +S++ G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 65 FGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRVG 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H T +VA G+ +S WIL++N WMQ P G F+I R+ T + +VFNP Sbjct: 125 RNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQG--FEIIDGRVIPTDWFAVVFNPSFPY 182 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H +A +V A F+ + +AW+LLRGR+ + ++ L +GD Sbjct: 183 RLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFHG 242 Query: 243 YEVAQVQPVKLAAMEGEWQT-EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AA+EG W+ P P + P+ +ER +A++IP L ++ THSLD Sbjct: 243 LNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSLD 302 Query: 302 KPVPGLKNLMAETYPR 317 K VP LK E P Sbjct: 303 KQVPALKEFKPEDRPN 318 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 187/323 (57%), Gaps = 9/323 (2%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ LSR QFA+TA +HFLFVPLTLGL L+A+MET+Y +R M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFF---G 117 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLAMEAL AFFLE TF+G + F Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 Q+L + W+VA G+N+S+LWIL ANG+MQ+P G D ++ MT F L+ N Sbjct: 121 RQKLKAFS----MWMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITN 176 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 +HT++A Y+ + +M I A++ L+G V +SF I + + L Sbjct: 177 GYVWYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVL 236 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFA-LKIPALLGILA 296 G A V +QP K AAM+ W+T + P +++ P+ N+ L IP L L Sbjct: 237 GHGYAQYVTALQPTKGAAMDAIWETR-SSVPMYLIQVPDSSTGSNSVQLLGIPGLASFLY 295 Query: 297 THSLDKPVPGLKNLMAETYPRLQ 319 T S + GL L + P ++ Sbjct: 296 TGSFSGTITGLNQLPQDELPPVE 318 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 72/116 (62%) Query: 380 IPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEA 439 +P V +FWSFR+M GSL ++V L+ L GK+ + LK+ +WS+PLP++ I A Sbjct: 314 LPPVEMIFWSFRLMTILGSLFIIVALLGLYLQKSGKLYTSKKYLKLLMWSIPLPYLTITA 373 Query: 440 GWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 GW + E GRQPW + +L T + S++ T + S+ +I Y + LI E+YL++K Sbjct: 374 GWIVAEVGRQPWMVYGLLRTANGVSSVPTSDVLLSISLISAFYMVLLIFEIYLIKK 429 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 165/500 (33%), Positives = 253/500 (50%), Gaps = 72/500 (14%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+RWQFA+ ++HF FVP+T+GL L+A++ T+ + + +TRF+ +F I+ A+G Sbjct: 5 LARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISMAVG 64 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TG+ +EFQFG NWS YS +VG+IFGAPLA+E L+AFFLESTF+GL+ FG RL H Sbjct: 65 VVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPPRVH 124 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L WLV+ G+ LSA +IL AN WMQ+P G + ++ + +T+F ++ N F H Sbjct: 125 LATIWLVSIGTLLSAFFILAANAWMQHPVG--YRVENGKAVLTNFWAVLGNSTLWWSFAH 182 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRE--------RNVALRSFAIGSVFGTLAIIGTLQLG 238 TV A TG ++ I+ + R + R A+ + + + G L + G Sbjct: 183 TVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTAVS----G 238 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D A + QP+K+AA E + T A F ++ + F +++P LL ++AT Sbjct: 239 DGQARLMDTQQPMKMAAAEALYDTTRG-ASFSLLTIGDLSGN-PIFQIRVPGLLSLIATL 296 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 + + V G+ +Q+ Q + Sbjct: 297 NPEGEVLGIHQ------------------IQQAEQ------------------------A 314 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 RY + Y +P + +WSFRIMVG G LL+L+ L L + R + Sbjct: 315 RYG-------SGSY-------VPVIWLTYWSFRIMVGAGILLVLLPLWILWRMRRRTGFE 360 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 RW+ ++AL + LP +A AGW TE GRQPW + ++ T S S + +A +L Sbjct: 361 GRWLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSF 420 Query: 479 VGLYTLFLIAEVYLMQKYAR 498 V +YT+ L+ + AR Sbjct: 421 VAVYTILGFIAAVLIARAAR 440 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 169/522 (32%), Positives = 246/522 (47%), Gaps = 84/522 (16%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYV-VTGKTI--------YRDMTR 53 + L+R QFA+T LYH+LFVPL++ L A+++T ++ V +T Y ++ Sbjct: 2 SIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLSL 61 Query: 54 FWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGL 113 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+E ++AFFLE+TF+GL Sbjct: 62 LTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLGL 121 Query: 114 FFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSE 173 ++FG RL HL W+VA G+ +SA IL AN +MQ P D T R + SF + Sbjct: 122 WWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFRD 181 Query: 174 LVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLR-----GRERNVALRSFAIGSVFGT 228 L+ N V+ F HT + G +MA+ W+LLR G E A R+ S FG Sbjct: 182 LLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFAAFRAL---SRFGA 238 Query: 229 LAIIGTLQL----GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF 284 A + L GD + +VQP+K+AA EG ++T APF + ++ +R F Sbjct: 239 WATLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRPTF 297 Query: 285 ALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAF 344 A+++P +L LA S V GLK+L + Y + G+ P + AF Sbjct: 298 AIEVPGMLSFLAKGSFSAEVLGLKDLQ-DAYA------------AQFGAGDYTPWIPVAF 344 Query: 345 RGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVM 404 WSFR+M+G G L LV Sbjct: 345 -------------------------------------------WSFRLMIGVGMLAALVA 361 Query: 405 LIALVQTLRGKI-DQHRWVLKMALWS----LPLPWIAIEAGWFMTEFGRQPWAIQDILPT 459 L+ L T + + D + + LW+ LP A GW TE RQPW + + T Sbjct: 362 LVHLWVTRKSAVLDPDPRLARGILWTLPVLPLLPLFANSFGWIFTETARQPWLVFGLFKT 421 Query: 460 YSAHS-ALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 S L+ ++A SL +Y A L+ + R G Sbjct: 422 ADGVSPGLSFAEVALSLAAFTLVYGALAWAWTLLVTRLVRRG 463 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 145/478 (30%), Positives = 236/478 (49%), Gaps = 67/478 (14%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ R QFA T +H+LF LT+GL ++ + Y+ T Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LAME + +FFLES+F+GLF FG + Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L H + L+ GS S I+ + WMQ P G ++ + + +F L NP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLA-IIGTLQLGD 239 ++H A VT + + I A+Y+L + + G +FG ++ +I + GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A V + QPV AAMEG + TE + ++ P+ ++ + +P +L L Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDKKLDNKIAVPNILSFL---- 308 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 TY GN E Q +GL+ + Sbjct: 309 --------------TY------------------GNWE----QEIKGLD----------Q 322 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 + D+ H T ++ +++++ IMVG G++ + +M+I+L Q +RGK+ Q Sbjct: 323 FEEDL-HPT-------------NISGLYYAYHIMVGLGTVFIGLMVISLFQLIRGKLFQT 368 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLI 476 +W+L ++ +P P+IA GW+ E GRQPW + +++ T + S +++G F+L+ Sbjct: 369 KWILWSLMFMMPFPYIANTTGWYTAELGRQPWLVYNLMRTAAGASPTVSSGNTLFTLL 426 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 155/464 (33%), Positives = 235/464 (50%), Gaps = 61/464 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + ++L+R QF T L HF + +++GL+F +A M+T + TG + +TRF+GKL ++ Sbjct: 2 NSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLLS 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+E L AFF+E+ F+GL+ FGW RL Sbjct: 62 FAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL W+VA + +SA IL AN WMQ+P G +++ +T ++FN + Sbjct: 122 RRLHLACVWIVAGATVVSAYAILVANSWMQHPVG--YELVDGSARLTDIVPVLFNLTVGL 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVF-GTLAIIGTLQLGDSS 241 H V + G + ++AI+A++LLRGR+ + A + A +VF G A + T G Sbjct: 180 TVAHVVSGALLAGTVVVLAIAAFHLLRGRD-SAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTE-PAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K+AA E ++TE PA + + LK+PA L ++ S Sbjct: 239 GMLAMKQQPMKMAAAEALYETEKPAGLSLFALGGLSTNPGELIVDLKVPAALSLINQLST 298 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V G+ +L E RY Sbjct: 299 QSTVRGINDLQTEAE------------------------------------------QRY 316 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 P Y +P V ++WSFR MVG G+ L+ +M + +R ++ R Sbjct: 317 GP-------GDY-------VPVVGLMYWSFRTMVGGGTALIAIMALGCWLAVRDRLAGSR 362 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS 464 L++AL + LP++A GW + E GRQPW I +L T A+S Sbjct: 363 RFLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANS 406 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 181/317 (57%), Gaps = 6/317 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +DL+R QFA T +H +F +T+GL L ++E +++ TG+ +Y+D+ +W K+FG+N Sbjct: 5 SALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKIFGVN 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 65 FGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGWSRVG 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 HL T +VA G+ +SA WIL +N WMQ P G F+I + + ++FNP Sbjct: 125 PGLHLFSTAMVALGTLISATWILASNSWMQTPQG--FEILDGVVVPVDWWAIIFNPSFPY 182 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDS 240 + VH +A ++ A+ + A AW++L+G ++ A R+ + L ++ LQ +GD Sbjct: 183 RLVHMGIAAFLATALIVGAAGAWHILKG-QKTEATRTM-LSMAMWMLVVVAPLQAVVGDL 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP KLAAMEG W+ P + P+ + E FA+ IP L ++ THS Sbjct: 241 HGLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTHSW 300 Query: 301 DKPVPGLKNLMAETYPR 317 D VP LK+ E P Sbjct: 301 DGQVPALKDFPPEDRPN 317 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P + +FWSFR+MVG G L++ + L +L RG + H+ L+M LW P IAI AG Sbjct: 316 PNASIIFWSFRVMVGLGMLMIALGLWSLCLRYRGSLYSHQGFLRMTLWMGPAGVIAILAG 375 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY-TLFLIAEVYLMQ 494 WF TE GRQPW + I+ T A S LA SL + + +Y +F I YLM Sbjct: 376 WFTTEIGRQPWVVYGIMRTADAVSNHDISSLAASLALFIIVYFFVFGIGISYLMH 430 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 171/520 (32%), Positives = 254/520 (48%), Gaps = 79/520 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRD----MTRFWGKL 58 D ++L+R QFA T H+LFV LTLGL+ L+AI+ T V T R+ + +FWG+L Sbjct: 2 DTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQL 61 Query: 59 FGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW 118 + IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FGW Sbjct: 62 YVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFGW 121 Query: 119 QRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNP 178 RL ++ WLV + SA WIL ANG+MQ P G +++ R +T F+ + NP Sbjct: 122 DRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVG--YEVREGRAYLTDFAAQLTNP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLL----RGRERNVALRSFAIGSVFGTLAIIGT 234 + V F H + A +TG +F+ +SA++LL LR+ I + T + Sbjct: 180 NATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAAASTFPV--- 236 Query: 235 LQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQ-ERNAFALKIP---- 289 LG + +A QP+KLA + GE +E ++D ER+ +P Sbjct: 237 YMLGAAQFAVLADSQPMKLALLAGEGTSE-----------LQKDMVERHGPGDYVPPEWI 285 Query: 290 -ALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE 348 L +A L L+ R R R+ ++M + A GL Sbjct: 286 ETWLHTMANIGYLVSTLALCALLVLFRARFTRSRLLAIVM------------VLAVGGL- 332 Query: 349 GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIAL 408 +G+ L Y D T Y IM C + L A+ Sbjct: 333 ----FGLYLGSYLFD----TPGPYNEI----------------IMPAC------IALAAV 362 Query: 409 VQTLRGKIDQHR---WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA 465 V G+I + R W+L +A +PLP++A GW E GRQPW + L A S Sbjct: 363 VLGFGGRIRRWRGLGWLLVVA---IPLPFVASVGGWLFREVGRQPWIVYGELKVSDAVSP 419 Query: 466 LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 ++ G + SL++ VG+ + L+ ++AR GP+A Q Sbjct: 420 VSFGHMLTSLVIFVGVLGALAVTNWTLIARFARRGPAASQ 459 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 111/258 (43%), Positives = 161/258 (62%), Gaps = 2/258 (0%) Query: 251 VKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNL 310 +KLAA+E EW+T+PAPA F ++ P Q +ER +A+KIP LG++AT S+D+PV GL+ L Sbjct: 1 MKLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLREL 60 Query: 311 MAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAA 370 + +Q G +A+ +Q+I QG+ F + LGYG++L ++ P++ T Sbjct: 61 AKLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPE 120 Query: 371 QYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI--DQHRWVLKMALW 428 Q +AA + IP VAPVF+SFRIMV G L + + A R ++ D RW L+ A+W Sbjct: 121 QIKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVW 180 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIA 488 ++PLPWIAIE GW + E GRQPW I +LPT+ + S+L L SL + YT + Sbjct: 181 AIPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVI 240 Query: 489 EVYLMQKYARLGPSAMQS 506 E+ LM KYARLGPS++ + Sbjct: 241 EIKLMFKYARLGPSSLHT 258 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 158/529 (29%), Positives = 243/529 (45%), Gaps = 76/529 (14%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + SR QFALT + H +F +++GL L + + +Y + RFW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+E +MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLR--MEMTSFSELVFNP 178 ++ + L + V G+ LSA+WIL AN WMQ P G ++ + + + NP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-----ERNVALRSFAIGSVFGTLAIIG 233 FVH A + A+ + I+A+Y+ R N+ + L I Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 234 TLQL--GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPAL 291 LQ GD A + + QP K AAME W+T+ + P ++VA+P Q+ L Sbjct: 241 PLQAIHGDLYARHIVETQPQKFAAMEAIWETD-SYVPEYIVAFPTSIQD----------L 289 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 L + A +P G +WL + G +Q EG Sbjct: 290 LDLRAKEIFGFGIP---------------GGASWL-----ASGGDPQATIQGLNEFEGPQ 329 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 P VA VFWSFRIMV G +L+ + + Sbjct: 330 -----------------------------PPVAIVFWSFRIMVALGFWFILLAFWGVYRW 360 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQ 470 RG++ + + K + S PL +A+E GW +TE GRQPW IQ ++ T + S LT + Sbjct: 361 WRGELYEDDLLHKALMLSAPLGLVAVELGWIVTEVGRQPWVIQGVMKTSDSVSPGLTGAE 420 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQKYARLGP------SAMQSEQPTQQQ 513 +L+ +Y L Y++ + R GP + +S P Q + Sbjct: 421 ATATLVGFAIVYLCLLTLYTYVIVRIIRAGPPDGDELTTTESSSPPQSE 469 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 177/314 (56%), Gaps = 8/314 (2%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R QF A++H ++ PLT+GL +L ME +V T Y +FW KLF INF +G Sbjct: 10 LARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFLINFGVG 69 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R+ H Sbjct: 70 VISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGRVGPKMH 129 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L T +VAFGS LSA WI+ AN WMQ P G +D + +T++ + VFNP F H Sbjct: 130 LFATGMVAFGSTLSAFWIMVANSWMQTPAGVKL-VDG-KFAITNWYDAVFNPDLPYGFGH 187 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAYE 244 A + + +SA+YLL+ R + +F + +L I+ LQ +GDS+ Sbjct: 188 MFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVI--SLFIVAPLQIFIGDSAGSS 245 Query: 245 VAQVQPVKLAAMEGEWQT-EPAP-APFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ QP KLAA+E W T +P AP+ ++A P Q ++N +AL+IP L ++ T ++ Sbjct: 246 LAETQPAKLAAIEAHWHTNKPGEGAPWALLAIPNQKDQKNDWALEIPDGLSMIVTKTMTG 305 Query: 303 PVPGLKNLMAETYP 316 V GL + + P Sbjct: 306 KVVGLDHFKPDDQP 319 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 115/314 (36%), Positives = 182/314 (57%), Gaps = 4/314 (1%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R QFAL +H+LFVP++LGL ++ +ME +Y+ T K+IY+ +T FW K+F + F +G Sbjct: 6 LARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTLTFVVG 65 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TGL F FG NWS ++ Y G++FG L E + AFFLES F+G+ FG +++K H Sbjct: 66 VVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKVSKKMH 125 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT--LRMEMTSFSELVFNPVSQVKF 184 +VA G+++SA WI+ AN WMQ P+G + L +MTSF V +P + +F Sbjct: 126 FFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPSALQRF 185 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H V+ +++G ++++SA YL + R ++ A + I L + L D +A Sbjct: 186 THVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSADVTARG 245 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 VA+ QP KLAA EG ++T+ P +++ + +ER + IP+ L +L + PV Sbjct: 246 VAKHQPAKLAAFEGVFKTQ-GHTPIYLLGIVDMKKER-VIGIPIPSGLSLLVHRNAKTPV 303 Query: 305 PGLKNLMAETYPRL 318 GL + +P + Sbjct: 304 TGLDQFPKDEWPNV 317 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P VA VF ++ +MV +++L+ LIA + + +L + +S+ P + E G Sbjct: 315 PNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSWSCKKGILWILSFSVLCPELCNEIG 374 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTT-GQLAFSLIM 477 W TE GRQPW + +L T A S + GQ+ SLI+ Sbjct: 375 WISTEVGRQPWVVYGLLKTKDATSPIVNAGQIWQSLIL 412 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 110/315 (34%), Positives = 177/315 (56%), Gaps = 2/315 (0%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+R QFA T +H +F L++GL +A++E ++ TGK Y+ + FW K+F + Sbjct: 152 FSALDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAV 211 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M +QFGTNWS +S++ G + G L E + AFFLE+ F+G+ FGW R+ Sbjct: 212 AFGMGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRV 271 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H T +VA G+ +S WIL +N WMQ P G F+I ++ T + ++FNP Sbjct: 272 SPRAHFGATLMVAIGTLISTFWILASNSWMQTPQG--FEIVDGQVVPTDWFAIIFNPSFP 329 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H +A +V A+ + A +AW+LL+GR + F++ + +GD Sbjct: 330 YRLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQH 389 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAA+EG W+TEP ++ P+ + +A+ IP L ++ THS D Sbjct: 390 GINTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYAVSIPHLGSLILTHSWD 449 Query: 302 KPVPGLKNLMAETYP 316 + GLK+ + P Sbjct: 450 GEIRGLKSFPPQDRP 464 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P VFWSFRIMVG G ++ + +A + RG++ + +W + AL P ++++ AG Sbjct: 464 PNSTVVFWSFRIMVGLGLAMIGLAALAWLLRRRGRLYEAKWFHRFALAMGPTGFVSLLAG 523 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 W TE GRQPW + ++ T A S L+T Q++ SL+ V +Y L VY M K R G Sbjct: 524 WVTTEVGRQPWVVYGVMRTSHAVSPLSTQQVSVSLMTFVVVYFLVFGTGVYYMLKLMRKG 583 Query: 501 PSAMQSEQP 509 P A+ + P Sbjct: 584 P-ALPGDTP 591 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 207 bits (527), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 151/498 (30%), Positives = 229/498 (45%), Gaps = 74/498 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFAL +H LF +T+ L ++L + + ++ I+ RFW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG R++ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H T +VA G+ LSA WIL N WM P G F++ TS+ +++FNP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTPAG--FEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDS 240 + H ++A +T + + +SA+ +L+G + A+ + I+ LQ+ GD Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGDTKRAP--KLALHTAIVLAGILAPLQIFVGDL 260 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP K++A+EG W TE AP + A P + +RN +A+ IP L ++ TH Sbjct: 261 HGLNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTHDA 319 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + GL GN P V F + GML+ Sbjct: 320 QGEIKGLDTF----------------------DGNHPP-VAPVFWSFRIMVATGMLM--- 353 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + + A + P++ + MVG T G Sbjct: 354 ---LASAWLGCFYLARKKPFPRL-----YLKAMVGL--------------TFSG------ 385 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 WV +A W ++TE GRQPW + IL T A + L G + FSL + Sbjct: 386 WVATLAGW-------------YVTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVYAV 432 Query: 481 LYTLFLIAEVYLMQKYAR 498 Y + L+A ++ ++ A Sbjct: 433 TYAVLLLAYIHTLKVMAN 450 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 146/480 (30%), Positives = 219/480 (45%), Gaps = 68/480 (14%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R QFA T +H + LT+GL L ++E +++ + IY D+ ++W K+F +N A+G Sbjct: 21 LARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNVAVG 80 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TG+ MEFQFG NW S+ G + G + ME L+AFFLE+ F+G+ FG ++ + H Sbjct: 81 VVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRPWVH 140 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L T +VA GS SA WIL+AN WMQ P G D R + + ++FNP + +H Sbjct: 141 FLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGPDG-RFQPVDWWAVIFNPSFPYRLMH 199 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 +A + A + A+ AW+LL+ ++ A R F+ G +GD Sbjct: 200 MSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHGENTR 259 Query: 247 QVQPVKLAAMEGEWQ--TEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 QPVKLAAMEG W P + A P+ + RN + IP++ + H+L + Sbjct: 260 DHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIPSVGSLYLRHNLTGTI 319 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 L + P W+ P V AFR + G Sbjct: 320 HSLNQFPPDELP--------WV-----------PGVFFAFRAMVG--------------- 345 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 G L++ + LV LRG++ + RW+ + Sbjct: 346 -------------------------------LGFLMIFFGVAGLVVRLRGRLWEARWLQR 374 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 + P IA+ AGW +TE GRQPW I L T + S + + S + IV +Y L Sbjct: 375 GMVAMAPAGVIAMLAGWVVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVVYLL 434 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 145/226 (64%), Gaps = 4/226 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 DV+DL+R QF +TA HFLFV LTLGL ++A+M T +V TG + MTRFWG+++ +N Sbjct: 2 DVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIVN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 +ALG+ TGL MEFQFG +WS ++Y GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 62 YALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRLP 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL W+V + SA WI+ AN ++Q P GA D R+ +T L+ N Sbjct: 122 RRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVTGD--RLALTDAGALLTNKALVF 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR--GRERNVALRSFAIGSVF 226 F H + AG TGA ++ SA+ L R G +R + RS G V Sbjct: 180 SFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVL 225 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Query: 415 KIDQH-RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLA 472 K+ H RW + + PLP+ A GW E GR PW I+D L A S LT G + Sbjct: 281 KVLPHWRWTHPLLMALTPLPFAAAILGWIAREMGRYPWMIRDRLTVADALSPGLTPGMIT 340 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYAR 498 SL + TL + + L+ K R Sbjct: 341 ASLAGFTTVLTLLAVIDYALIAKIVR 366 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/313 (35%), Positives = 178/313 (56%), Gaps = 7/313 (2%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R QFA T +H +F ++GL LA++ +++ T Y + +W K+F + F +G Sbjct: 48 LARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKKIFAVAFGMG 107 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V +G+ M +QFGTNWS +S+ G + G +A E L AFFLE+ F+G+ FG +R+ + H Sbjct: 108 VVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFGRERVGEKLH 167 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDI-DTLRMEMTSFSELVFNPVSQVKFV 185 + T +VAFG+ +SA WIL+ N WMQ P G F I + + + ++VFNP + V Sbjct: 168 MFATAMVAFGTLMSATWILSVNSWMQTPAG--FSIAENGQFIPEDWWQIVFNPSFPYRLV 225 Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDSSAY 243 H V+A ++T ++ + A+ A +LLR R A R F++ AI+ LQ+ GD Sbjct: 226 HMVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMAMWMA--AIVTPLQIYAGDMHGL 283 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 + QP K+ AMEG +++ P AP + Q + + +AL+IP L ++ HSL+ P Sbjct: 284 NTLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILKHSLNAP 343 Query: 304 VPGLKNLMAETYP 316 + GL + + P Sbjct: 344 LDGLDTIPDDEEP 356 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 64/122 (52%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P VA VF+SFR+MVG G +L + L +L RG + W+ + A+ P +IA+ AG Sbjct: 356 PPVAIVFYSFRVMVGLGFAMLGLGLWSLWARYRGTLFTTPWLHRAAILMGPTGFIAVLAG 415 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG 500 W TE GRQP+ + +L T + + + +A SL+ + +Y A Y + K Sbjct: 416 WITTEVGRQPYTVYGLLRTSDSLAPVAAPAVATSLVAFIIVYFFVFGAGTYYLLKMMNKR 475 Query: 501 PS 502 P+ Sbjct: 476 PA 477 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/316 (34%), Positives = 179/316 (56%), Gaps = 7/316 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFA +H +F T+GL +A ET++ T I++ +++FW ++F + Sbjct: 4 DPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAVV 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV +G+ M FQFGTNWS +S + G L+ E + AFFLE+ F+G+ FG ++ Sbjct: 64 FGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKVP 123 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL +VA G+ +S+ WIL AN MQ P G ++ +TS+++ +F P Sbjct: 124 QGVHLFAAIMVATGTFISSFWILAANSLMQTPQG--LELINGMYYVTSWADSLFTPSFGY 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDS 240 +F H +A ++T ++ + +SAW++L+ RE ++ +I F L ++ LQ +GD Sbjct: 182 RFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWF--LLVLAPLQAVVGDF 239 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K+AAMEG W+T + P + A P+++ ++N F + IP L + TH Sbjct: 240 HGLNTLKHQPMKVAAMEGNWETS-SQVPLLLFAIPDKESQKNHFEVAIPGLASYVLTHDW 298 Query: 301 DKPVPGLKNLMAETYP 316 D VPGL + E P Sbjct: 299 DGVVPGLNEVPIEEQP 314 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 13/127 (10%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V VFWSFRIMVG G L++ + LV +G+I + L + P+IA+ AG Sbjct: 314 PPVFIVFWSFRIMVGLGLLMIAFGVWGLVLRRKGRIYHNNIFLNGLRFMSLSPFIAVLAG 373 Query: 441 WFMTEFGRQPWAI-------QDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLM 493 W +TE GR PW I Q + P+ LT G F+LI + +Y+ A VY + Sbjct: 374 WVVTETGRAPWLIYGQMTHAQGLTPS------LTGGMALFTLIGYIVVYSCVFSAGVYYL 427 Query: 494 QKYARLG 500 + + G Sbjct: 428 LQVFKGG 434 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 167/317 (52%), Gaps = 10/317 (3%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 DL+R F H L+ PLT+GL L E ++ T + +TRF+ KLF INF Sbjct: 9 DLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINFGA 68 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW +++K Sbjct: 69 GVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISKKM 128 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFV 185 HL T+ VAF S LSA+WIL AN WMQ PTG H + ++ ++ +FNP F Sbjct: 129 HLFATFNVAFSSMLSAMWILVANSWMQSPTGVHLEKGLFLVD--DWTAAIFNPNFLTAFP 186 Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAY 243 H +A G F+ ISAW + + R + +R+ + + L I+ LQ +GD Sbjct: 187 HMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRT--LTASLMALVIVAPLQVYIGDELGR 244 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPA----PFHVVAWPEQDQERNAFALKIPALLGILATHS 299 VA+ P LAAMEG W T A +++VAWP++++ N F + IP +L +L H Sbjct: 245 TVAEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVLSLLEDHK 304 Query: 300 LDKPVPGLKNLMAETYP 316 V GL E P Sbjct: 305 WVSTVKGLDQFKPEDRP 321 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 120/312 (38%), Positives = 173/312 (55%), Gaps = 5/312 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFA +H LF +T+ L ++L + T + +M RFW K+F ++ Sbjct: 5 DTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFALS 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 65 FAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRVP 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H+L T LVAFG+ +SA WI+ N WM P G ID + T + ++FNP Sbjct: 125 GWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQGFEM-IDGVAFA-TDWWAIIFNPSMPY 182 Query: 183 KFVHTVMAGYVTGAMFIMAISAW-YLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F H +A +T A I +SA+ +LL R R+V + +G G L I + LGD Sbjct: 183 RFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVR-TALKVGVSIGALLIPVQIFLGDLH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AAMEG W+T P + A P++ N + IP L ++ THS D Sbjct: 242 GLNTKEYQPAKVAAMEGLWETG-TNVPLILFAIPDEAARENHAEIGIPGLASLILTHSWD 300 Query: 302 KPVPGLKNLMAE 313 + GL + +AE Sbjct: 301 GELQGLNDFVAE 312 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 18/136 (13%) Query: 381 PQVAPVFWSFRIMVGCGSLLLL-----VMLIALVQTLRGKIDQHRWVL-----KMALWSL 430 P VAP+F+SFR+MVG G +L V ++ + + W+ K+ LW+L Sbjct: 319 PPVAPIFYSFRVMVGTGMAMLALSWFGVFMMWKRRRMHPNPGACHWLAVEGLPKIYLWAL 378 Query: 431 -PLP---WIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFL 486 P+ W+A AGW+ TE GRQPW +Q ++ T A + + +A +L+ + +Y L L Sbjct: 379 VPMAFSGWVATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAGTLVGYLVVYGLLL 438 Query: 487 IAE----VYLMQKYAR 498 A VYL +K AR Sbjct: 439 FAYISVIVYLARKAAR 454 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 158/495 (31%), Positives = 226/495 (45%), Gaps = 69/495 (13%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 LSR Q A T +H +F T+GL LA++E + + TG +YR + FW K+FG+ F +G Sbjct: 8 LSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAFGMG 67 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V +G+ M FQFGTNWS S G I G L E+ AF LE+TF G+ G R+ + + Sbjct: 68 VVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRPWFY 127 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L LVA G+ +SA WIL N WMQ+P G + + T ++ ++FN V V+F H Sbjct: 128 LTSCILVAAGTTMSAFWILVNNSWMQHPVG--YVVQNGIFVPTDWAAIIFNHVVWVRFPH 185 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 ++ Y+T A + A+ A YLL+ R R A + + + G + + Sbjct: 186 MLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGDYLH 245 Query: 247 QVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPG 306 QP K AA+EG W EQ FA IP A H Sbjct: 246 DDQPAKFAAVEGRWTD-------------EQPAAEVIFA--IPD-----AAH-------- 277 Query: 307 LKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNH 366 +R R W + P + G L++ D Sbjct: 278 ------------ERNRFEW----------KVPVL-------------GSLIASGTADSRE 302 Query: 367 VTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMA 426 V + AA R P V F++FR+M GCG ++L + V RG++++ RW+L Sbjct: 303 VGLTDFAAADR---PPVLIPFFAFRVMAGCGLIMLALAWAGTVAARRGRLERRRWLLWPL 359 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVGLYTLF 485 S PL +IAI AGWF E GRQPW + +L T A + LT A +L + V +Y Sbjct: 360 ACSFPLGFIAILAGWFTAEVGRQPWTVWGVLRTADALTPGLTAHFAAATLALFVAIYAFI 419 Query: 486 LIAEVYLMQKYARLG 500 VY + + R G Sbjct: 420 FCFGVYYIVRIVRRG 434 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 110/258 (42%), Positives = 160/258 (62%), Gaps = 6/258 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + +DL+R QFALTA HFLFV LTLGL L+A+M+T +TG ++ MTRFWG+L+ IN Sbjct: 2 ETLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVIN 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 +A+G+ TGL MEFQFG W+ +++ G++ GA LAME L+AFF+ESTF+GL+ FGW RLN Sbjct: 62 YAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRLN 121 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ HL V W+V + SA WI+ +NG++Q P GA LR +T + ++ NP + Sbjct: 122 RWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEVAGGVLR--LTDAAAVLANPAAIT 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H + + F+ +SA +L +G E+ RS IG A++ T LG + Sbjct: 180 AFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALGGA- 238 Query: 242 AYEVAQVQPVKLAAMEGE 259 + QP+K+A G Sbjct: 239 --QFDTAQPMKIAVYAGR 254 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 10/100 (10%) Query: 420 RWVLKMALWS------LPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 R V ++ +W +PLP+ A+ AGW E GRQPW + +L T A S L+ G + F Sbjct: 310 RAVHRLRIWHVLLTAMIPLPFAAMLAGWVFREVGRQPWTVYGLLTTEDALSDLSPGAIRF 369 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGP----SAMQSEQP 509 SL L+ L ++ +L+ + AR GP +A S +P Sbjct: 370 SLAAFTLLFGLLVVVNTWLLARNARQGPVDTAAAPASAEP 409 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 151/260 (58%), Gaps = 10/260 (3%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMET----IYVVTGKTIYRDMTRFWGKL 58 D++DL+R QFA+T H+LFV LTLGL+ L+AIM+T + MTRFWG++ Sbjct: 2 DILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQI 61 Query: 59 FGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW 118 + IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FGW Sbjct: 62 YVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFGW 121 Query: 119 QRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNP 178 RL H+ + WLV + SA W+L ANG+MQ P G+ +T F L+ NP Sbjct: 122 DRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVVRDGV--AYLTDFGALLTNP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRER-NVALRSFAIGSVFGTLAIIGTLQL 237 + V H +A +TG +F+ +SA +L RGRE LR+ G + + Sbjct: 180 SALVPLAHVSLAALLTGGLFVAGVSAHHLRRGREDFRGPLRT---GVLVAAVVTFPVYAA 236 Query: 238 GDSSAYEVAQVQPVKLAAME 257 G +A QP K A M+ Sbjct: 237 GGLQYPIIAATQPAKTAMMD 256 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 143/480 (29%), Positives = 219/480 (45%), Gaps = 72/480 (15%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L R QFA T H + T+GL L ++E +++ T + +Y D+ +W KLF + A G Sbjct: 10 LVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTTAAG 69 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 V TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG +++ H Sbjct: 70 VVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGHRVH 129 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 T +VA GS +SA WIL+AN W+ P G D + + + ++FNP + +H Sbjct: 130 FFATCMVALGSLVSAFWILSANSWLHTPAGFARAADGNFLPV-DWLRIIFNPSFPWRMLH 188 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDSSAYE 244 +A + A I A+ AW++LR A F++G +AI+ LQL GD Sbjct: 189 MSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMG--LWVIAIVAPLQLLAGDLHGRN 246 Query: 245 VAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 + QP KLAA+EG WQ PA P + A P+ +RN L IP L + H+ Sbjct: 247 TLEHQPQKLAAIEGSWQRPPAGEGEPLRLFAIPDMQAQRNRHELAIPRLGSLYLRHNWTG 306 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + GL+ P + P V AFR + G Sbjct: 307 TIAGLREFPRSDLPPV-------------------PIVFFAFRAMVG------------- 334 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 G LL+ V +++LV RG++ + RW+ Sbjct: 335 ---------------------------------LGLLLIAVGMLSLVLRARGRLYEARWL 361 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 ++ + P +A+ GW +TE GRQP+ + +L T + S L+ +A S + I+ LY Sbjct: 362 QRVVVVMAPSGMLAMLCGWVVTEVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVLY 421 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 150/498 (30%), Positives = 240/498 (48%), Gaps = 65/498 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVV-TGKT-IYRDMTRFWGKLFGI 61 V +LSR QFA+TA+ HFLFV T+G++ I E +Y G T Y +T F+ ++F Sbjct: 12 VTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIFFF 71 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F GV TGL MEFQFG NWS ++ +GD+ G PLA+E++++FF+EST +GL+ F W +L Sbjct: 72 SFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWGKL 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H + + S S +WI+ N +MQ P G F ++ R +TS L+ NP + Sbjct: 132 PKRAHAWLGVGMLGASLFSIVWIIAINAFMQNPYG--FRLEGGRARLTSLITLLQNPQYR 189 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F+H + A +TG I+AW +L R+ + + IG + A GD Sbjct: 190 PEFLHVLFAILITGGFLTAGIAAWQILHKRDTSAFKIAVQIGLLIALPAAFLQPAQGDDQ 249 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAP---APFHVVAWPEQDQERNAFALKIPALLGILATH 298 A +QP+K A+EG ++TE +P AP+ + A +D A+ IP + + Sbjct: 250 GAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIPNMGTYFGKN 308 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 + +PG+ N +A+ Y + V +++ +G + Y Sbjct: 309 TFTGTMPGM-NAVAKMY-----------------HAKFDKTVAKSY---DGQMTY----- 342 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR--GKI 416 P V +FW+ +MV G + L A + R I Sbjct: 343 ---------------------YPPVTLLFWTMHLMVYAGYFFTMFALFATIMLHRRQSAI 381 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSL 475 + H L+ W L LP++ +GW + E GR P+ + +L Y A S ++T + SL Sbjct: 382 EDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSVTVTEAGTSL 441 Query: 476 IMIVGLYTLFLIAEVYLM 493 LFL+A+++L+ Sbjct: 442 -------ALFLMADIFLV 452 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 129/413 (31%), Positives = 200/413 (48%), Gaps = 73/413 (17%) Query: 99 EALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAH 158 E L AFF+E+ +G+ FGW R+NKY H L + + G LSA WIL+AN WMQ P G + Sbjct: 5 EVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTPDGVN 64 Query: 159 FDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALR 218 + +++ + E+ S+ ++FNP +++H +MA Y++ M I+ +SA+YL++ + + A Sbjct: 65 Y-VNS-KFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSFAKT 122 Query: 219 SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQD 278 + + I L +GD EV + QP+K AA+EG W T+ AP + A+P + Sbjct: 123 CIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYPSEA 181 Query: 279 QERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREP 338 QE+N FA++IP L ++ TH LD + GLK++ P R P Sbjct: 182 QEKNLFAIEIPKLASLINTHELDGELIGLKSV-----PEKDR-----------------P 219 Query: 339 HVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGS 398 V F +G G L+ I++G Sbjct: 220 VVAVVFYSFRIMVGIGTLM----------------------------------ILIGLVG 245 Query: 399 LLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP 458 LLL R KI+ +W LK+ + PL ++A GWF EFGRQPW + +IL Sbjct: 246 TLLLA---------RKKIESSKWFLKLCTLTTPLGFVATITGWFTAEFGRQPWVVYNILR 296 Query: 459 TYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL---GPSAMQSEQ 508 T + S L+ Q+ SL I+ +Y F+I + + R+ GPS E+ Sbjct: 297 TEYSVSDLSFWQVFSSLASIIIVY--FIIFGYFYFKYLFRIINGGPSTDGEER 347 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 132/493 (26%), Positives = 226/493 (45%), Gaps = 72/493 (14%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R Q A T +H +F + +GL L+ + E + + G ++R + + W K F + FA+G Sbjct: 25 ARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFAVGA 84 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 +G + F+ G W + G + G P +E AFF E FVG++ +GW RL + H Sbjct: 85 VSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEGF-AFFTEGIFVGIYLYGWNRLAPFHHW 143 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 L +A +SA +++ N +M P G D D +++ ++ ++ NP + + H Sbjct: 144 LCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDADGKLLDVQPWTAML-NPATGAQTTHM 202 Query: 188 VMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 ++A Y+ + + AW +LRGR R+ +G + G + +G + + VA Sbjct: 203 IVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHVVAV 262 Query: 248 VQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGL 307 QP+KLAAMEG+W+TE AP + P+ + + +A++I PG+ Sbjct: 263 TQPIKLAAMEGQWETETY-APLRIGGIPDPETKTTPYAIEI----------------PGM 305 Query: 308 KNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHV 367 +++A P + QG L AF P+ H Sbjct: 306 LSVLAYDNPAAE------------VQG------LNAF-----------------PEDLH- 329 Query: 368 TAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA--LVQTLRGKIDQHRWVLKM 425 P V +F+IMVG G+LL+ + L + L++ + + RW L Sbjct: 330 -------------PPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGKSAWHERRWWLLT 376 Query: 426 ALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLF 485 L S PL +A+EAGW +TE GRQPW +Q L T A + F++ M +Y + Sbjct: 377 LLASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVTQAPGVWFIFAVTM--SIYLVL 434 Query: 486 LIAEVYLMQKYAR 498 + + +++ A+ Sbjct: 435 TVGCISVLRILAK 447 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 141/491 (28%), Positives = 224/491 (45%), Gaps = 67/491 (13%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR QF T H +F L++GL + V T + Y + FW K+F + F +G Sbjct: 24 SRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFAVGFVMGT 83 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 TG+ M FQFGTN+ ++ G++ G PLA EA MAFFLE+ F+G+ +G +R+ ++ Sbjct: 84 VTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRERVADRTYV 143 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV---FNPVSQVKF 184 L + LV G+ LS WIL N WMQ P G + ME+ ++ V P + Sbjct: 144 LSSVLVGVGAWLSGFWILVVNAWMQTPRGYEM-VTRNGMEVAKLTDPVAAFLTPRMPWMY 202 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 VH + A ++ A+ + +SA+ + + + + + + V ++ GD+ Sbjct: 203 VHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHGDAYGRH 262 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 V QP K AAME ++T A H++A+P+ + AL + + Sbjct: 263 VEDTQPQKFAAMEAHYET--GSADLHLLAFPKS----------LDALTDPRTENLFTVSL 310 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 PG+ + +A S G+ + V+ L+ Y + Sbjct: 311 PGIGSFLA-------------------SGGDFDAEVIG--------------LNEYEEN- 336 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 P VA VFWSFR MVG G L + + L T RG++ + LK Sbjct: 337 ----------------PPVALVFWSFRFMVGLGFLFIGLALWGGYLTYRGRLTESTRYLK 380 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLA-FSLIMIVGLYT 483 + + P + A+ GW++TE GRQPW IQ L T A S+ TG A +L+ V LY Sbjct: 381 SMIAASPFGYAALLTGWYVTEIGRQPWVIQGELKTSEAVSSTLTGTEATLTLVGFVVLYI 440 Query: 484 LFLIAEVYLMQ 494 ++ +Y+++ Sbjct: 441 ALILTALYVLK 451 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/252 (42%), Positives = 158/252 (62%), Gaps = 5/252 (1%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGKLFG 60 +D++R QFA+T H++FV +TLGL+ +L ++T +T + R MTR+WG ++ Sbjct: 4 VDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGLIYV 63 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 IN+++G+A+G+ MEFQFGTNWS S+ VGD+FGAPLA+E L+AF ESTF+ L+ FGW + Sbjct: 64 INYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFGWGK 123 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L + H L+ WLVA + SA W+L ANG+MQ PTG D R +TS + L NP + Sbjct: 124 LPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNNPST 182 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 FVH + A G + ++ +SA +L R +E++ RSF +G + G +I G + Sbjct: 183 IWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGLFGMIWAFGTGWA 242 Query: 241 SAYEVAQVQPVK 252 V Q+QP K Sbjct: 243 QYGFVNQIQPAK 254 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 171/318 (53%), Gaps = 8/318 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFA H L LT+GL +A +E + TG+ +YR ++ FW ++F ++ Sbjct: 5 DALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAVS 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG +R+ Sbjct: 65 FGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRVP 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ H L LVA G+ LS+ WIL N WMQ P+G F +D R S ++ +P Sbjct: 125 QWAHALAAALVALGTLLSSFWILAVNSWMQTPSGYRF-VDG-RFYPESIVAVLLSPSFPY 182 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + HTV+A VT A ++ A YLL R + + + F +A+ + LGD+ Sbjct: 183 RLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKMALGFLAIAVPVQIALGDAHG 242 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 QPVKLAAMEG W T + A P+ +E N F L IP L + TH + Sbjct: 243 LNTLAHQPVKLAAMEGLWDTGRG-VRATLFAIPDGARETNRFELAIPTLGSLYLTHDPNG 301 Query: 303 PVPGLKNLMAETYPRLQR 320 V GLK+ +PR +R Sbjct: 302 LVRGLKD-----WPRDER 314 Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 377 RGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIA 436 R P VA VF++FR+MVG G ++L +++ L G++ R L + P+ ++A Sbjct: 311 RDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTLWRGGRLYVRRGWLATCRAATPIGFVA 370 Query: 437 IEAGWFMTEFGRQPWAIQDILPTY-SAHSALTTGQLAFSLIMIVGLY 482 + AGW TE GRQPW + ++ T S +LTT +A SL V Y Sbjct: 371 VLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTTTDVALSLAAYVLCY 417 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 128/489 (26%), Positives = 227/489 (46%), Gaps = 72/489 (14%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R Q A++ +H +F + + + F + I +Y+ TG IY+ +T+ W + I FA G Sbjct: 20 ARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAILFATGA 79 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 +G + F+ G W + + G IFG P ++E AFF+E+ +G F +GW R N++ H Sbjct: 80 VSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWNRFNRWFHW 138 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFD-IDTLRMEMTSFSELVFNPVSQVKFVH 186 +V S + ++ AN WM P G FD +D + + + FN + +H Sbjct: 139 ATGLVVGISGIASGILVVAANAWMNSPAG--FDYVDGKYINIDPIQAM-FNDAWFSQALH 195 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 ++A +V + + A +++ + + +F I ++ +A + GD SA +V Sbjct: 196 MMLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDISAKDVG 255 Query: 247 QVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPG 306 + QP KLAAME ++TE A A F + P+++ + +K+P LL LA +DKPV G Sbjct: 256 KRQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKYGIKVPGLLSFLAYGDIDKPVTG 314 Query: 307 LKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNH 366 L ++ + +P + A+ +M +G GMLL Sbjct: 315 LHDIPRDEWPPVAITHYAFQIM----------------------IGLGMLL--------- 343 Query: 367 VTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMA 426 LL ++ IAL + + + W+ ++ Sbjct: 344 -------------------------------VLLSILYFIALFK--KKSWLKSTWLFRLF 370 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFL 486 + ++PL +IA+EAGW +TE GRQPW I I+ T A + + +A+S + ++ Sbjct: 371 VIAIPLGYIALEAGWVVTEVGRQPWIIYGIMRTIDAVTPMP--GIAYSFYVFTAVFVSLS 428 Query: 487 IAEVYLMQK 495 +A +YL+ + Sbjct: 429 VAVIYLLYR 437 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 135/514 (26%), Positives = 233/514 (45%), Gaps = 86/514 (16%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R Q A + +H +F + + + F +++ ++ T K +YRD+T+ W K I FA G Sbjct: 7 ARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAIFFATGA 66 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 +G + F+ G W + + G IFG P ++E AFF+E+ +G + +GW +LN + H Sbjct: 67 VSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEG-TAFFIEAIALGFYLYGWNKLNPWFHW 125 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYP------TGAHFDIDTLRMEMTSFSELVFNPVSQ 181 +V LS + ++ AN WM P G + +ID ++ +FN Sbjct: 126 ATGVVVGVSGLLSGILVVAANAWMNSPAGFDYINGQYLNIDPIKA--------MFNEAWF 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H +A +V+ + + A +L+G+ ++F I +VFGT+A GD S Sbjct: 178 SQSLHMCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDIS 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +VA+ QP KLAAME + TE AP + P+ ++ +ALKI Sbjct: 238 AKDVAKRQPEKLAAMEAHFHTEKF-APLIIGGIPDTANKKVDYALKI------------- 283 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 PGL + MA G+ V +GL+ Sbjct: 284 ---PGLLSFMA--------------------TGDFNGEV----KGLDA-----------V 305 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--IDQH 419 P + P VA ++F++MVG G ++ + ++ + + K +D Sbjct: 306 PKEDQ--------------PPVAVTHYAFQVMVGLGMAMVGIAILYFIALWKKKQWLDS- 350 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 +W+LK+ + + PL +IA+EAGW +TE GRQPW I+ ++ T A + + + +S + Sbjct: 351 KWLLKLFVAATPLGFIALEAGWTVTEVGRQPWIIRGVMRTADAVTPMP--GIVYSFYLFT 408 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +Y I L+ + + S SE + Sbjct: 409 AVYISLAIIVSLLLYRQITMVDSLYDSESVQSKN 442 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 168/318 (52%), Gaps = 10/318 (3%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 LSR FA H L+ P+T+G+ +LL +E ++ TG + + RF+ K+F INF G Sbjct: 11 LSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINFGAG 70 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 VATG+TME FG + +S VG FG L E + AF E+ F+GL FGW +++K H Sbjct: 71 VATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSKGMH 130 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 T+ V S LSA+WIL AN WMQ P G + ++T++ + N F H Sbjct: 131 AFATFNVGLSSTLSAMWILVANSWMQSPNGV--VLKNGLFQVTNWWNAILNENFTWGFPH 188 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAYE 244 +A A+S+W++L + RN L + + L I+ +Q +GD+ + Sbjct: 189 MWVATVELALFVFAAVSSWFIL--KNRNADLFTKLLKPTLLALLIVAPIQIFIGDTLGRD 246 Query: 245 VAQVQPVKLAAMEGEWQT----EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 VA QP LAAMEG + T +H++A+P + N+FA+ IP +L +L TH+ Sbjct: 247 VAMTQPTSLAAMEGHYHTYLPNGKVNTGWHLIAFPNAKNDGNSFAITIPHVLSLLETHTW 306 Query: 301 DKPVPGLKNLMAETYPRL 318 + V G+ + A+ P + Sbjct: 307 NGKVTGMDSFPAKDRPDV 324 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID-----QHRWVLKMALWSLPLPWI 435 P V F++FR MV G L V L LRG+ + +H W L+ ++S LP++ Sbjct: 322 PDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALRKHPWFLRSVVFSGFLPYL 381 Query: 436 AIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 AI GW+ E GRQPW + +++ TY S ++ GQ F Sbjct: 382 AIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIF 419 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 144/504 (28%), Positives = 215/504 (42%), Gaps = 93/504 (18%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR QF T H LF L++GL + + TG Y + FW K+F + F +G Sbjct: 31 SRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAVGFVMGT 90 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 TG+ M FQFGTN+ +S G++ G PLA EA MAFFLE+ F+G+ FG ++++ + Sbjct: 91 VTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKVSDRTYF 150 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV---FNPVSQVKF 184 L + L FG+ LS WIL N WMQ P G I ME+ ++ + F P + Sbjct: 151 LSSVLTGFGAWLSGFWILVVNAWMQTPQGYEM-ITRNGMEVAKLTDPIAAFFTPRMTWMY 209 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL--GDSSA 242 VH + A ++ A+ + ++A+ + + R+ + I + L + LQ GD+ Sbjct: 210 VHMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLL--LIVAAPLQAVHGDAYG 267 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE------QDQERNAFALKIPALLGILA 296 V QP K AAME ++T A H+ A P E N FA+ +P + LA Sbjct: 268 RHVEDTQPQKFAAMEAHYET--GTADLHLFAIPTSPDAIMNPSEENLFAISLPRVGSFLA 325 Query: 297 T-HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 + D V GL E Q P V +FR + +G G Sbjct: 326 SGGDFDAVVKGL---------------------DEYEQNPPVPLVFWSFRIM---VGLGF 361 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWS----FRIMVGCGSLLLLVMLIALVQT 411 L + FW +R + SL L M+ A Sbjct: 362 LF-------------------------IGLAFWGGYLIYRDRLSDSSLYLRAMIAA---- 392 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA-HSALTTGQ 470 PL + A+ GW++TE GRQPW +Q L T A S L++ + Sbjct: 393 ------------------SPLGYAALLTGWYVTEIGRQPWVVQGELKTGEAVSSTLSSTE 434 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQ 494 SL V +Y ++A +Y ++ Sbjct: 435 ATLSLAAFVVIYIGLVVAALYTLR 458 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 172/326 (52%), Gaps = 4/326 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + +R+Q A + +H +F + +G+ L+ I E +++ T + Y + R W K + Sbjct: 2 DELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAVL 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G +G + F+ G W + + G I G A+E AFF+E+ F+GL+ +GW +L Sbjct: 62 FAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKLP 120 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H L + VA S + +L+AN WMQ PTG F++ + + +FNP V Sbjct: 121 PKIHWLCGFPVALSGLASGVLVLSANAWMQSPTG--FELVGGQPTNIDPVKALFNPAWGV 178 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 +H+ ++ Y+ A + A+ A+ +LRG+ R+ I ++ + GD+SA Sbjct: 179 MALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDASA 238 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 VA QP KLAAMEG + +E A + WP+ ++E+ +A++IP LL LA H + Sbjct: 239 RSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPNA 297 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLM 328 V GL ++ + +P + R A+ +M Sbjct: 298 LVRGLDSVPRDQWPNVVVVRAAFQVM 323 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAG 440 P V V +F++MVG G L++V + ++ +W+ + S + A+EAG Sbjct: 311 PNVVVVRAAFQVMVGLGIFLVVVSVWYWASRFWRRL-HTKWLYIALVLSGIAGYTALEAG 369 Query: 441 WFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF-SLIMIVGLYT 483 W +TE GRQPW I I+ T A+T + F +LI +V +Y Sbjct: 370 WIVTEVGRQPWIIYGIMRT---SEAVTPTEGVFETLIAVVAIYA 410 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 69/132 (52%), Positives = 102/132 (77%) Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 RY P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 +W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 VGLYTLFLIAEV 490 GLYTLFL+AE+ Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 2/216 (0%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R QFALTA H++FV LTLGL L + + + G RFWG L+ +N Sbjct: 4 DPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYLVN 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGW R+ Sbjct: 64 YGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDRMG 123 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ HL +V + SA W+L +NG+++ P G F++ +T L+ NP + + Sbjct: 124 RWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAAVL 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALR 218 F H V + GA+ + A SA++L+R + + R Sbjct: 182 AFGHIVTGSLLVGALVVAATSAYHLVRRDDAHGVFR 217 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 4/124 (3%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M+ +L+ L+ + L+ G +D+ RW L + + LP++A GW E RQPW Sbjct: 284 VMMTSWALVFLLGPLMLLAWPLGGLDRWRWFLAPLVVTPFLPYLASVGGWVFRETNRQPW 343 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS----AMQSE 507 + L T A + L+ S + +L+ +YAR GP A Q Sbjct: 344 TVVHHLTTADAVTPLSPVAAVASFGFFTAAFAALAAVTYWLLVRYARRGPEGGPLAEQRT 403 Query: 508 QPTQ 511 QP + Sbjct: 404 QPPE 407 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + +R QFALT+ H++FV TLG+ L+ + + ++ RFWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + +GV +GL ME Q NWS ++ G +F APLA+E + AFF ESTF+GL+ FGW R+N Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ HL +V + LSA W+L ANG+++ P G F + +T LV NP + + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERN 214 F H + + G + + +SA++L RG + + Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGNDPD 213 Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLP-LPWIAIEAGWFMTEFGRQP 450 +M C ++ LV+ +AL+ L ++D+ RW L L +P L +A AGW E GRQP Sbjct: 281 VMTLCWTVFFLVLPVALLAWLVRRLDRWRW-LHWLLSVMPVLALLAGVAGWLYRELGRQP 339 Query: 451 WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 WA+ + T A + L+ S ++ G + + +L+ +YAR GP Sbjct: 340 WAVWHHMTTAEAITPLSVPHAVASFVVFTGAFAVLAGITWWLLVRYARRGP 390 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 136/513 (26%), Positives = 225/513 (43%), Gaps = 80/513 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTL-GLIF--LLAIMETIYVVTGKTIYRDMTRFWGKLF 59 D +D +R A++ H +PLT G+ F ++ +E +Y+ TG +YR + R W ++ Sbjct: 19 DHLDQARQMQAMSFAVH---IPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIM 75 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 FA+GV TG + F+ G W + GD+FG A+E AFFLE+ F+ ++ +GW Sbjct: 76 VALFAVGVVTGTILSFELGMLWPEFMGTFGDVFGLGFAIEGF-AFFLEAIFIAIYVYGWD 134 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 RL H + + F L A ++ NGWM P G ++ +++ + L N Sbjct: 135 RLPPKWHFASGFPIVFTGVLGATMVIAVNGWMNNPGGFRL-VNGEAVDVKPWEALFGNSF 193 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLR-GRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + VH +A Y+ + A+ AW LR GR + AI A L +G Sbjct: 194 FWHEVVHMYVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVG 253 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D +A EVA QPVKLAA+EG +T A H+ W ++D + ++IP LL +LA H Sbjct: 254 DWAAREVAVHQPVKLAAIEGLQRTTSG-ASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFH 312 Query: 299 SLDKPVPGLKNLMAETYP-RLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + V GL ++ E P + R A+ M I G +L F +LL Sbjct: 313 DPNATVRGLDSVPPEDRPGPINTVRFAFQAMVLIGSGL---AMLAVF----------VLL 359 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 R+ +G +P+ W +R +V G ++ ++ + T Sbjct: 360 VRW---------------RKGRLPRSV---WFYRALVLAGPGAVVALICGWITT------ 395 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 E GRQPW + +++ T A + + + L+ Sbjct: 396 ---------------------------EVGRQPWVVYNVMRTDEAVTGAGGVPVGYGLLA 428 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +V Y L+A +++++ AR + + E P+ Sbjct: 429 LV--YVGLLVAVWWILRRLAR---TPLADEVPS 456 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 128/461 (27%), Positives = 200/461 (43%), Gaps = 80/461 (17%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R Q L+ +H +F + L ++ I + ++ TG Y + ++ K I FA+G Sbjct: 7 ARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAILFAVGA 66 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 +G + F+ G W + G++ G P ++E AFF E+ F+G++ +G +L+ HL Sbjct: 67 VSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEGF-AFFTEAIFLGIYLYGRGKLSPRLHL 125 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 L LVA LSA +++ N M P G F + R +F+P + + +H Sbjct: 126 LSGALVALSGALSAFFVILVNACMNDPAG--FTMVDGRPANIDPVAAMFSPPWKHETLHG 183 Query: 188 VMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL-----GDSSA 242 ++A Y A + I A LLR + ++FA+ TLAI G L G +A Sbjct: 184 ILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAV-----TLAIAGVTALAQPLVGHYAA 238 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 EV + QP KLAAME ++T + + P L+G L Sbjct: 239 VEVGRGQPAKLAAMEAHFET----------------------SARAPLLVGGL------- 269 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 P ++RG + + + EI G L F L D P Sbjct: 270 -------------PDVERGEVDYAI--EIPAG------LSVF--LHAD-----------P 295 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK-IDQHRW 421 D A R P V SF++MVG GS + L+ ++ V R + I R Sbjct: 296 D---AVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAVVGAVLAWRRRGIPDQRP 352 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 L A+ + PL +A+EAGW +TE GRQPW ++ + T A Sbjct: 353 FLWAAILASPLGIVAMEAGWLVTELGRQPWIVRGAMRTRDA 393 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 154/319 (48%), Gaps = 14/319 (4%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+R Q A + +H F +GL +LL E ++ TG ++ +T+ W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G +G + F+FG W + + G G ME AFF E+ FVG++ +GW+RL+ Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEGF-AFFTEAIFVGMYLYGWKRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H L W +A LS L+I+ N WM P G + + +E ++ + +P + Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRGI-VEQNGKLLEAKPYAPFI-SPGTPP 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAII---GTLQL-- 237 + VH ++A + + AI A +LRGR R IG LA++ LQL Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIG-----LAVVLACAPLQLIV 239 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD +A QP KLAAMEG + T + APF + + + L+IP L +L Sbjct: 240 GDWAARVAGANQPFKLAAMEGLYHTG-SHAPFALGGIYDNKTGEIRYGLEIPGGLSLLEG 298 Query: 298 HSLDKPVPGLKNLMAETYP 316 S + GL + P Sbjct: 299 FSTGHVIKGLDGAPPDERP 317 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 92/326 (28%), Positives = 163/326 (50%), Gaps = 18/326 (5%) Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 HTV ++T +F M + A+YL++ R +A F + F +A I + +GD YEV Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVP 305 A QP+KLA +EG+++TE A + +Q+ +++ LKIP LL L+ H + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKNLMAETYPRLQR-GRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 G+ L+ + + + + +L Q++ Q + P Q + + A Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQA-QTPEEKQKIKDQLAE----------AKVK 168 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 H +Y+ +P + VF +F +MV G +L+ L+A +G +++H+ L Sbjct: 169 AHAFNIKYED-----LPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKGFLW 223 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 + + S+PLP++A GW E GRQPW + +L T S + Q+A S+ + +YT+ Sbjct: 224 LLVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTIYTI 283 Query: 485 FLIAEVYLMQKYARLGPSAMQSEQPT 510 F I +YL+ K GP+ +++ + Sbjct: 284 FFIVFLYLIFKTIGKGPNITTAKEES 309 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 197/452 (43%), Gaps = 71/452 (15%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLT 72 A + +H +F L +G+ LLA + +++ T Y + + W + + FA+G +G Sbjct: 2 AYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGTG 61 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWL 132 + F+ G W + ++ G G +E AFF E+ F+GL+ +G +R+ H L Sbjct: 62 IAFELGLLWPEFMHFAGSTVGPAFTLEGY-AFFTEAIFIGLYLYGRERMRPVAHWLTAVA 120 Query: 133 VAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGY 192 VA S+ + AN W Q P G D+ E + + NP V VH+ +A Y Sbjct: 121 VAVSGAASSFLVTAANAWQQNPVG--VDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIACY 178 Query: 193 VTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVK 252 + + AW +LRGR + ++ I G +A + GD SA VA+ QP K Sbjct: 179 AATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEK 238 Query: 253 LAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMA 312 LAAME + T+ A AP + P ++ A+ VPGL + +A Sbjct: 239 LAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVA----------------VPGLLSFLA 281 Query: 313 ETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQY 372 Y RL E++ +R P Sbjct: 282 --YGRLD---------AEVAGLDRVP---------------------------------- 296 Query: 373 QAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI-ALVQTLRGK-IDQHRWVLKMALWSL 430 R P V V SF++MVG G ++LV L A V+ R + + + R +L + + S Sbjct: 297 ----RQEWPNVPLVHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSS 352 Query: 431 PLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 PL ++A+EAGW ++E GRQPW I ++ T A Sbjct: 353 PLGYLALEAGWIVSETGRQPWTIWKVMLTADA 384 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/76 (84%), Positives = 71/76 (93%) Query: 17 LYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQ 76 +YHFLFVPLTLGL FLLAIM T YV+TGK IY+DMT+FWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSFYSNYVGDIF 92 FGTNWS+YS+YVGDIF Sbjct: 61 FGTNWSYYSHYVGDIF 76 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 4/206 (1%) Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEI----SQGNREPHVLQAFRGL 347 +G++ T SL +PG+ +L+ T ++ G A+ ++ I G F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 G LGY +LL RY D T AQ A +P V P+FW+FRIMVG G + + Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALT 467 ++R ++D H W+LK+A+ ++PLPWIA E GW + E GRQPW I+ +LPT A S L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 TGQLAFSLIMIVGLYTLFLIAEVYLM 493 G L ++ + +Y++ + E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLM 206 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 6/318 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + SR LT +H ++ + +G+ ++AI + + + Y + R W + F I Sbjct: 4 YDPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 A+GV TG + Q W + G + PL ME AFF E+ F+G++ + W R Sbjct: 64 TVAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFMETF-AFFFEAIFLGIYLYTWDRF 122 Query: 122 -NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 N+ +HLL+ VA GS+ SA++I N +M P G F + + +FNP Sbjct: 123 ENQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQG--FALKNGEIVNIDPIAAMFNPAM 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 K H + Y+T A + +I+AW+LL+G ++ + + I + +GD Sbjct: 181 PTKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGDL 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S +A QP KLAA E ++T + AP E+D E +ALKIP L +LA + Sbjct: 241 SGKFLAVYQPEKLAAAEWHFETS-SHAPLVFFGMLEEDGEVK-YALKIPYALSVLAHNHP 298 Query: 301 DKPVPGLKNLMAETYPRL 318 V GL ++ + P L Sbjct: 299 GAIVTGLNDIPKDERPPL 316 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Query: 386 VFWSFRIMVGCGSLLLLVMLIA-LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMT 444 + + F +MV G L+LV L R K +W + PL IAIEAGW++ Sbjct: 318 IHYLFDMMVAIGVFLMLVATAYWLGSVFRWKWTTKKWFFGLLAAGGPLSMIAIEAGWYLA 377 Query: 445 EFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 E GRQPW ++ + T A +A ++ + L++ LY + IA V ++ + R P Sbjct: 378 EVGRQPWILRGYMKT--AEAATSSAHVDMMLVLFCLLYLVLGIASVIVLVRLFRRNP 432 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 4/314 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + +R ++ +H ++ + +GL LL + E + + TG + ++ R W + + Sbjct: 2 DDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAVL 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G +G + F+ G W + + G + G +ME AFF E+ F+ L+ +G QRL+ Sbjct: 62 FAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEGF-AFFTEAIFLALYSYGEQRLS 120 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + T + S +SA+++++ANGWM P+G ++ + ++ N Sbjct: 121 RRAQFFCTVPMVVASAISAVFVISANGWMNTPSGFRM-VNGVASDIHPLVAFA-NQAWPH 178 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + VH A YV + A LLRGR+ ++ + GTLA+ L GD +A Sbjct: 179 QAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPLMLMSGDWAA 238 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ Q KLAA E ++T A AP + WP+ + +A+KIP LL LA + Sbjct: 239 EALAEHQKAKLAAAEAHFKTM-AAAPLVIGGWPDPETGTVRYAIKIPKLLSYLANGDANS 297 Query: 303 PVPGLKNLMAETYP 316 V GL + P Sbjct: 298 VVQGLDAFPLGSTP 311 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 29/48 (60%) Query: 415 KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 ++ R L + L + P IA+E+GW +TEFGRQPW IQ L T A Sbjct: 346 EVTLKRGALILVLIAAPFGMIALESGWMVTEFGRQPWIIQGYLRTSEA 393 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 144/312 (46%), Gaps = 10/312 (3%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R Q + +H + +G+ L + TG Y + R W + G+ FA+G Sbjct: 21 ARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFAVGA 80 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 +G + F+ G W GD+ G P +E AFF+E+ F+G++ + W RL HL Sbjct: 81 VSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEGF-AFFIEAIFLGIYLYAWDRLPPRVHL 139 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 L V SA +++ AN WM P G FD+ + E +FNP + + VH Sbjct: 140 LTGVPVVLAGVASAFFVVTANAWMNQPRG--FDLVDGEVVGVRPWEAMFNPATPPQTVHM 197 Query: 188 VMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 ++A ++ + ++ A L RGR F + F + + +GD +A+ + Q Sbjct: 198 IVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVPFTFAAVLAPVQVAVGDWAAHFLGQ 257 Query: 248 VQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGL 307 QP+KLAA+EG +T P AP + + R +AL+IP L +LA D V GL Sbjct: 258 YQPLKLAAIEGLARTAPG-APLSLGGIYTGGELR--YALEIPNALSLLAHWDPDAIVLGL 314 Query: 308 KNLMAETYPRLQ 319 + PR Q Sbjct: 315 D----QAPPRFQ 322 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Query: 381 PQVAPVFWSFRIMVGCG-SLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEA 439 P V V SF++MVG G +L+LL + + + R + + RW L + + P +A+EA Sbjct: 323 PPVNVVHLSFQVMVGIGFALVLLGIWLGVSWWRRRDLPRSRWFLLASAAAGPAAVVAMEA 382 Query: 440 GWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 GW +TE GRQPW + D+L T A + L L+ ++ +Y + A V+++++ ARL Sbjct: 383 GWVVTEVGRQPWIVYDVLLTRDAVN--PQPGLWAGLLTVLVVYAVLTAATVHVLRRLARL 440 Query: 500 GPSAMQSEQPTQQ 512 GP ++ P + Sbjct: 441 GPVPVRGLAPQEH 453 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 10/321 (3%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R F + +H +F L +G+ ++ + E + ++ Y + + W K I Sbjct: 2 DNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAIL 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + + +G + W Y VG + P +E + AFF+E+ F+ ++ + RL+ Sbjct: 62 LGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRLS 120 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD-IDTLRMEMTSFSELVFNPVSQ 181 ++ + VA G+ SA+ I +A+ WM P G FD +D + + E VFNP Sbjct: 121 PTMRIITVFFVALGATASAVLITDAHAWMNTPRG--FDYVDGVVSNVRPL-EAVFNPSIY 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG----RERNVALRSFAIGSVFGTLAIIGTLQL 237 V +H + + Y+TGA + +++A+ L RG RE + + + T Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLMLSLGVALVMSFYTANN 237 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G +A + + PVKLAA EG ++T+ AP ++ P+ + R ++IP +L LAT Sbjct: 238 GHDTAIMLHEEIPVKLAAAEGLFETQDN-APLAILGTPDPEAGRVIGGIEIPGMLSWLAT 296 Query: 298 HSLDKPVPGLKNLMAETYPRL 318 S D V GL + + +P L Sbjct: 297 GSTDGVVQGLNDFPRDEWPPL 317 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 390 FRIMVGCGSLLLLVMLIALVQTLRGKIDQH---RWVLKMALWSLPLPWIAIEAGWFMTEF 446 F +MVG G++LL + I V G+ Q +W+L + PL I IE GW + Sbjct: 323 FNVMVGIGTVLLGLAGIFWVIWFLGRKKQKAFPKWLLGALILCGPLSMIGIETGWIFSCT 382 Query: 447 GRQPWAIQDILPTYSAHSALTTGQ 470 GRQPW I + T A +A +G Sbjct: 383 GRQPWTIFGVQRT--AEAATNSGN 404 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 141/311 (45%), Gaps = 8/311 (2%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 +R A T H L VP + L F+ +M + + + R W + + FA+G+ Sbjct: 19 ARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFAIGI 78 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 TG + F+FG W GD+FG +EA AFFLE+ + ++ +GW+RL + H Sbjct: 79 ITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPWTHF 137 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 + + + + A I+ AN WM P G D + + + +F P+ ++ H Sbjct: 138 WLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQGKPIHV-DVRQAIFTPMFGPEYWHF 196 Query: 188 VMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAYEV 245 V+A +T + + A LRGR F + F AI+ +Q LGDS+A V Sbjct: 197 VVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTL--PFTVAAILTPVQFMLGDSAARAV 254 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVP 305 QP+K AA E W+T+ P ++ D + LKIP L ILA V Sbjct: 255 FHKQPIKFAATEIVWKTD-THVPEYMFGRLNSDGTISG-GLKIPQLDSILAGFKPSTQVT 312 Query: 306 GLKNLMAETYP 316 GL ++ A P Sbjct: 313 GLTSVPASDRP 323 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 1/117 (0%) Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 +L+ + P A+ R Q W+F IMV GSLL+L+ L R + Sbjct: 301 ILAGFKPSTQVTGLTSVPASDRPTAVQATIAHWAFDIMVTIGSLLILLALWYAWSWWRHR 360 Query: 416 IDQ-HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL 471 + RW + A + + +E GW TE GRQPW + + A ++ G L Sbjct: 361 DNPGSRWFYRCAALAGLACLVTVECGWITTEVGRQPWIVYQHMRVSEAVTSTRAGSL 417 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 151/324 (46%), Gaps = 16/324 (4%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R F T +H +F L +GL ++ + E IY T Y M + W K + Sbjct: 2 DDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAVL 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + + TG Q W + +G + P +E + AFF+E+ F+ ++ + RL+ Sbjct: 62 LGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRLS 120 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ + V G+ SA+ I N + + P G F I ++ FNP + Sbjct: 121 PAMRIVAVFFVLVGAAASAVLITNVHAFEGTPAG--FKILNGKITDVDPWAAFFNPSFFI 178 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRE--------RNVALRSFAIGSVFGTLAIIGT 234 H V++ ++TGA + +++A+ ++R R+ R L + IG +F L + Sbjct: 179 TAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN- 237 Query: 235 LQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGI 294 G SA + + QP KLA EG ++T + AP + + + ++E+ +A++IP L Sbjct: 238 ---GHESAQMLYEYQPEKLAGAEGLFETR-SHAPLAIGGFTDPNEEKVKWAIEIPWALSF 293 Query: 295 LATHSLDKPVPGLKNLMAETYPRL 318 LA + D V GL + +P L Sbjct: 294 LAANRFDTVVKGLNAFPRDEWPPL 317 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 3/113 (2%) Query: 390 FRIMVGCGSLLLLVMLIALVQTLRGKIDQH-RWVLKMALWSLPLPWIAIEAGWFMTEFGR 448 F MVG G LL+L +I +V K D+ W+L + + + P I IE GW GR Sbjct: 323 FNAMVGVGMLLILYSIIGVVWRKVLKKDRFPTWLLIIFMTAGPFSLIGIEFGWIFACTGR 382 Query: 449 QPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 QPW I +L T + TTG + + +Y + A VY++ Y R P Sbjct: 383 QPWVIYHLLKT--SDVVTTTGSIGVLFLFFTFVYAVLGAAVVYVLLYYFRKHP 433 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 36 METIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAP 95 ME +++ T IY + +FW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT 155 + +E + AFFLE+ F+G+ FGW+R + HL+ T LV G++ SA WIL+ N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTPD 120 Query: 156 GAHFDIDTLRME 167 G ++R+ Sbjct: 121 GISVIDGSIRIH 132 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 3/251 (1%) Query: 43 TGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM 102 TG + RFW + F ++F L +A L + Q G+ W + +G++ G + L Sbjct: 44 TGLPGWTAAYRFWVRFFALSFVLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLS 103 Query: 103 AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDID 162 F L+S F+G+ FG +R+++ H L ++VA G ++ W+L W+Q P GA ID Sbjct: 104 VFILKSCFLGVMLFGQRRVSERVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGATL-ID 162 Query: 163 TLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAI 222 R ++ + VFNP T + + A I+ ++A LR + +F Sbjct: 163 A-RYQVYDWYAAVFNPSLGWNLGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKT 221 Query: 223 GSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERN 282 V A + + D + +A+ QP K AA G W + P + + WP+ + N Sbjct: 222 ALVVAVAASLLQAPVLDGAGRVMAEHQPAKAAAAAGYWHSGAEPG-WTLFGWPDARAQAN 280 Query: 283 AFALKIPALLG 293 AL +P G Sbjct: 281 RAALALPGAGG 291 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 15/321 (4%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR LT +H +F + +G+ ++ E I + + Y + R W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 A+GV TG + Q W G PL ME AFF E+ F+G++ + W R Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFMETF-AFFFEAIFLGIYLYTWDRFK 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N + H L+ V G+ LSA +I N +M P G F I + + +FN + Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSPEG--FKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVA-----LRSFAIGSVFGTLAIIGTLQ 236 K H +++ Y+T A + AI+A++LLR + + A ++ + + G + T Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF----ALKIPALL 292 +GD S +A+ QP KLAA EW E + +Q ++ A+KIP L Sbjct: 241 VGDFSGKYLAKYQPEKLAA--AEWHFETTNEAELIFGGILDEQADGSYEIKGAVKIPYAL 298 Query: 293 GILATHSLDKPVPGLKNLMAE 313 ILA + D V GL E Sbjct: 299 SILAGGAPDTEVIGLNEFAKE 319 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%) Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVF--WSFRIMVGCGSLLLLVMLIALVQTLR 413 +L+ APD + ++ A AP+F + F IMV G L + + ++ Sbjct: 300 ILAGGAPDTEVIGLNEF------AKEDQAPLFVHYFFDIMVSIGMYLAAISALFILAFRL 353 Query: 414 GKIDQH-RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 K++ + +W+L+ PL ++IEAGW E GRQPW + I+ Sbjct: 354 KKLNPYNKWLLRGIFIGGPLAIVSIEAGWMYAEIGRQPWTLYGIM 398 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 31/207 (14%) Query: 335 NREPHVLQAFRGL-EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAI------------- 380 +P + A G+ E + G G+LL Y N + + + ++ Sbjct: 10 KHQPTKIAAMEGIWETEKGAGLLLFAYPDQQNEINHYEIKIPNLASLILTHDFLGEVKGL 69 Query: 381 --------PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ----HRWVLKMALW 428 P V VFWSFR+MVG G L++++ ++++Q LRGK+ Q H W + M Sbjct: 70 KEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFLHGWWISM--- 126 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTG-QLAFSLIMIVGLYTLFLI 487 +P +IA+ AGWF TE GRQP+ + I+ T + S+ TG Q+A+SLI + +YTL Sbjct: 127 -MPSGFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLIAFIVMYTLIFG 185 Query: 488 AEVYLMQKYARLGPSAMQSEQPTQQQG 514 A Y + K G ++ E+ + G Sbjct: 186 AGSYYILKLIYKGIPVIKEEEQFYKHG 212 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 64/84 (76%), Gaps = 3/84 (3%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +++ L+R+QFA+T ++HF FVP ++G +F++AIME++YV TGK+ Y+ MT+FWG +F ++ Sbjct: 9 NIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLLS 68 Query: 63 FALGVATGLTMEFQFGTNWSFYSN 86 FA+GV TG+ F F +S+ S Sbjct: 69 FAVGVVTGI---FCFFIGYSYSSG 89 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/77 (54%), Positives = 56/77 (72%) Query: 437 IEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKY 496 IE GWF+ E+GRQPWAI +ILP + S L+TG L FS+ +I LY F+I E+YLM KY Sbjct: 3 IECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMFKY 62 Query: 497 ARLGPSAMQSEQPTQQQ 513 ARLGPSA+++ + +Q Sbjct: 63 ARLGPSALKTGKYYFEQ 79 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 107/455 (23%), Positives = 178/455 (39%), Gaps = 64/455 (14%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 FA T H L V L++GL + I E + + Y + K I FA+G A+G Sbjct: 17 FAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTASGT 76 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLLVT 130 M + W + VG++ P +E + +F LE+ + ++ + W+ N+++H ++ Sbjct: 77 VMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWGLS 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTG---AHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 V G+ LSA + N WM P G A F + F+ + + + +H Sbjct: 136 LAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFI-TASTAAEELHM 194 Query: 188 VMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 A Y G I+ + L+ E+ + R I +VF L II G + Sbjct: 195 SGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVFMILDIIYLGITGSNELST 254 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 + ++P+K A+E + + F +A PE + G+L H L Sbjct: 255 LMVIEPIKYTALELDLHATIGTS-FATMA-PEH-------------IFGVLINHKLA--- 296 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 A ++P +Q LL ++ G L +G YG+ + P + Sbjct: 297 ------YAPSFPYIQS-----LLAFPLTFGKGSIPGLIPLTTYKGVTDYGV----WPPYI 341 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID-QHRWVL 423 H T +MVG G L+ L L +VQ R K HR+ L Sbjct: 342 VHDT---------------------LDLMVGFGVLMGLYWLYVVVQYFRKKDPLSHRFTL 380 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP 458 + + +E GW+ E GR P+ I+ +P Sbjct: 381 LGGIAVAIMGVFTMEDGWYTAEVGRVPYIIRSPVP 415 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 7/266 (2%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 FA T H LFV L++ L + I E + + Y + K I FA+G A+G Sbjct: 13 FAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTASGT 72 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLLVT 130 M + W + VG + P +E + +F LE+ + ++ + W+ N+++H ++ Sbjct: 73 VMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWALS 131 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV--FNPVSQVKFVHTV 188 V G+ LSA + N WM P G + L ++ + L + P + + +H Sbjct: 132 LAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELHMS 191 Query: 189 MAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 A Y G + I+ A+ L+ E+ V R I +VF L II G + + Sbjct: 192 GAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVFAILDIIYLGATGSNELSTL 251 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHV 271 ++P+K AA+E + AP H+ Sbjct: 252 LVIEPLKYAALEQDMVPVTYGAPEHI 277 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 148/304 (48%), Gaps = 11/304 (3%) Query: 19 HFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFG 78 H L V + + L +++I E + + +Y + + I FA+G A+G+ + + Sbjct: 19 HILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALIIFFAVGTASGVVVAIELF 78 Query: 79 TNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLLVTWLVAFGS 137 W + + +G + PL ME + AFF E+ F+G++ + W + ++ +H L++ +A G+ Sbjct: 79 VLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNKFKSRMKHWLLSVFIAIGA 137 Query: 138 NLSALWILNANGWMQYPTGAH--FDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTG 195 +S ++I N +M P G + + + T ++ + ++ P + V+ H + + G Sbjct: 138 VMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNTPTTWVEIGHVIGSTIFAG 197 Query: 196 AMFIMAISAWYLL--RGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKL 253 A F +A A+ LL +G ER ++ I + ++II T+ +G S ++ QP K Sbjct: 198 AAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTVIIGIESITDLMLYQPEKF 257 Query: 254 AAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAE 313 AA+E + + P A V + ++ IP L+ LAT S + + +L A Sbjct: 258 AALEMNFNSGPHVAE---VIGGFLVNNKTVDSINIPGLMSFLATGSFNGAIASNDSLAA- 313 Query: 314 TYPR 317 YP+ Sbjct: 314 -YPK 316 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 28/156 (17%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIAL------VQTLRGKIDQHRW---VLKMALWSLP 431 P VA V +F IMVG G L+ +VM+I L ++ +R K + + + +L ++S P Sbjct: 320 PPVAVVHNTFDIMVGIGVLIGVVMIIFLLIWLLNIRKIRDKFESNHFFNKILSNKIFSDP 379 Query: 432 ---------------LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLI 476 L +E GW E GRQPW I +++ +A A T+ + I Sbjct: 380 FDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAA--ANTSPSIVPIGI 437 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 I+ Y + L A + ++ + + SE +Q Sbjct: 438 AIIAFYIVVLPATLLFVRNVIK--KRDLNSELGVKQ 471 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 28/334 (8%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 ++ R FA + H L V +++GL +L ++E I + Y +TR K + Sbjct: 2 NIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYIAIKYKDVYYDLLTRRVAKALVMF 61 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 FA+G A+G M + + + + + P E + AFFLE+ + +++ W Sbjct: 62 FAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDVFK 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTG---AHFDIDTLRMEMTSFSELVFNP 178 N+ H L+T+ VA G+ SA++I N WM P G ++++ +++ F P Sbjct: 121 NRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFIT-ALTP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE---RNVALRSFAIGSVFGTLAII--- 232 + + H V+ G M + A A+ LR + + + ++ + II Sbjct: 180 STGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKTEEAKTLYMKGLKVTFPMNMFLIIMAG 239 Query: 233 --GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF-----A 285 GTL++ Y QP K AA++ AP H+ E+N Sbjct: 240 LSGTLEMSGLLTY-----QPEKYAALDLNPYPIARDAPEHLFG---TIVEKNGHYYVLGG 291 Query: 286 LKIPALLGILATH-SLDKPVPGLKNLMAETYPRL 318 +KIP + +LA + +L+ PVPGL T+P L Sbjct: 292 IKIPFVQSLLAGNGNLNTPVPGLSQFPTSTWPPL 325 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 47/70 (67%) Query: 380 IPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEA 439 +P+V P+FW+ RIM G L+ IA+ + + RW L++ALW+LPLPWIAIE Sbjct: 4 VPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIAIEC 63 Query: 440 GWFMTEFGRQ 449 GWF+ E+GR+ Sbjct: 64 GWFVAEYGRR 73 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 52/79 (65%) Query: 393 MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWA 452 M+ G L+ L+ A VQ LR K+ Q +LK+ LW LPLPWIAIE GWF+ E+GRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IQDILPTYSAHSALTTGQL 471 I +ILP + S L T + Sbjct: 61 IYEILPVGVSASNLNTNTI 79 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 131/574 (22%), Positives = 218/574 (37%), Gaps = 116/574 (20%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 +L R AL +H +++ LT GL + +M + TG +Y R + +NFAL Sbjct: 65 NLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLAVNFAL 124 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 G TG +EF W + + PLA+E L+AF E F+ LF R+ Sbjct: 125 GAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGRVRPPV 183 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAH-----------------FDID------ 162 + + A + LS + I N WMQ P G D+ Sbjct: 184 SIAILAAYAGFAYLSGVLITTVNSWMQAPWGVGPVAKALYPFMPEYGPNVVDVQKLVALK 243 Query: 163 ----------TLRMEMTSFSELV-----------FNPVSQVKFVHTVMAGYVTGAMFIMA 201 +L +E F+E V ++P + V H ++A + G +A Sbjct: 244 LAAVATGSPISLIIEKPGFAETVGIVLKDPNVALYSPYALVSMFHNILAAILIG--MAVA 301 Query: 202 ISAW---YLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY---EVAQVQPVKLAA 255 + W Y G E + + + + G A+I +Q + + V + P K A Sbjct: 302 TAGWAYKYFKTGNEEYLKI----VKPLAGAFAVIFVIQAPIVAHFMGEMVVEYNPTKFAL 357 Query: 256 MEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETY 315 MEG T P ++ ++A +KP+ G Sbjct: 358 MEGAVTTFNDP------------------------IIALVAYGDPNKPIVGFDQFEKAC- 392 Query: 316 PRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL-GYGMLLSRYAPDMNHVTAAQYQA 374 L G + ++++ P VLQ G DL G L ++ + A Q Sbjct: 393 --LSHGNAT---VGDLAKTLGIPTVLQ-LAGQTVDLNGIASL------KLSDLCLADLQK 440 Query: 375 AMRGAIPQVAPVFW---SFRIMVGCGSLLLLVMLIAL--VQTLRGKI-----DQHRWVLK 424 AM +P V ++ +F I+ G + +LL + + +L I D+ R V Sbjct: 441 AMS-YMPLVHTTYYVKVAFAIIGGLAAAVLLFYFYKVPGLSSLAAAIARILGDERRRVFI 499 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL-PTYSAHS---ALTTGQLAFSLIMIV- 479 +AL + I GW + E GR+PW + +L P+ A + G LA + ++I+ Sbjct: 500 LALLLVLGTVIPAVGGWAVREIGRKPWTVYGLLYPSEVVTPVPYATSPGFLAVTYLVILA 559 Query: 480 ----GLYTLFLIA-EVYLMQKYARLGPSAMQSEQ 508 GL+ ++L+A Y + + G +SE Sbjct: 560 VNLGGLFAMYLVATREYKFLELLKRGAGVEKSES 593 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 4/131 (3%) Query: 174 LVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIG 233 +VFNP + VH +A ++ A F+ ++AW+LLR R + A ++ LA Sbjct: 6 IVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALLAAPL 65 Query: 234 TLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA---PFHVVAWPEQDQERNAFALKIPA 290 L GD + QP ++AAMEG+W AP P + A P+ + RN + + IP Sbjct: 66 QLLAGDRQGENTLEHQPQRVAAMEGDWDAR-APGSGEPMVLFAIPDMRERRNHYEVSIPR 124 Query: 291 LLGILATHSLD 301 + + H+L Sbjct: 125 VASLYLRHNLS 135 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 12/142 (8%) Query: 381 PQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ----HRWVLKMALWSLPLPWIA 436 P V VFWSFR+MV G L+LL+ + +LV +GK+ + HR+ L M P ++A Sbjct: 61 PPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHRFALTMG----PAGFVA 116 Query: 437 IEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY-TLFLIAEVY---L 492 + AGW TE GRQP+ + +L T + S L+T +A SLI V +Y +F + +Y L Sbjct: 117 VVAGWITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIYFAVFGMGVLYILHL 176 Query: 493 MQKYARLGPSAMQSEQPTQQQG 514 M K G ++ P + G Sbjct: 177 MAKSPYRGEHGIEPGAPIRTAG 198 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 256 MEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETY 315 MEG +Q+ P AP + P+Q+ +A+++P L ++ H L++P+ GL + E + Sbjct: 1 MEGHYQSHPDGAPLILFGLPDQEAGTVRYAVEVPKLSSLILKHGLNEPLNGLDTVPRENW 60 Query: 316 P 316 P Sbjct: 61 P 61 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 5/54 (9%) Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQS-----EQPT 510 A+S+LT G L FS+ +I GLYTLFL+AE++LM K+ARLGPS++++ EQ T Sbjct: 2 ANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQST 55 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 386 VFWSFRIMVGCGSLLLLV----MLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGW 441 V + F +MV G L ++ +L + + LR H+W+L L + P +AIE GW Sbjct: 170 VHYFFDLMVTMGILCFVISGVYVLTLMFKKLRN-FSTHKWMLYGILLTGPASMLAIEFGW 228 Query: 442 FMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 F+TE GRQPW ++ + A +A G + F I+ LYT+ + Y++ + + P Sbjct: 229 FLTEMGRQPWIVRGYMRV--AEAATQAGGITFVTILFGILYTILMYTCAYVLIRMFKNKP 286 Query: 502 SAMQSEQPTQQQG 514 + + ++QG Sbjct: 287 AYEDVNRLAKKQG 299 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 6/169 (3%) Query: 151 MQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG 210 M P G F++ +M E +FNP V+ H + +T A I +I+A+ LLR Sbjct: 1 MNTPAG--FELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 RERNVAL---RSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA 267 R+ + ++ + + G + + ++ GD SA + + QP KLAA E + T Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAK 118 Query: 268 PFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYP 316 E+ Q+ A+++P LL LA +S+ V GL + +P Sbjct: 119 LLLFGVLDEKTQQVKG-AIELPGLLSFLADNSVKTKVQGLNDFPKSLHP 166 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 109/276 (39%), Gaps = 26/276 (9%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +D +RW A+ L H LG I + I E +Y+V + D R + + I Sbjct: 13 STLDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIF 72 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 F +G A G +EF T WS + +G P +E L AF E + L+ F W ++ Sbjct: 73 FGVGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTWGKVR 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQY-PTGAHFDIDTLRME----MTSFSELVF 176 N + H ++ AFG SA IL + P G E +TS+ Sbjct: 132 NGWVHWVIGLAAAFGGYWSAYNILAVMASLSMRPPGMIIQNLAASNETIAGLTSYLVTWA 191 Query: 177 NPV---------SQVKFVHTVMAG-----YVTGAMFIMAISAWYLLRGRERNVALRSFAI 222 P + V H ++A V GA+++ Y+ R + I Sbjct: 192 KPTDAWNMFWWGANVFIFHGILAAAILTWSVVGAIYLYG----YVREHRPDQAKVLKVII 247 Query: 223 GSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEG 258 V AI G + LG V Q P+KLAA+EG Sbjct: 248 PGVAVMTAIEGFI-LGHDQGELVLQFDPLKLAAIEG 282 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 1/138 (0%) Query: 19 HFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFG 78 H+ + +GL FL I IY T + + K F I FA+G ATG EF Sbjct: 27 HWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVFAVGAATGTASEFGLV 86 Query: 79 TNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSN 138 W + G PL E + AF LE F+ L ++GW++ K +++ +L G Sbjct: 87 LLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGKSAMVVLLFLSFIGPW 145 Query: 139 LSALWILNANGWMQYPTG 156 SA I++ N +M PTG Sbjct: 146 YSAAMIVSVNSYMVAPTG 163 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 12/116 (10%) Query: 394 VGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI 453 VG G L L + + T R +I +W ++ L +LP P++A +GW TE GRQPW + Sbjct: 5 VGSGVLALAGLWV----TRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWVV 60 Query: 454 -------QDI-LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 Q I L A S +T +AFSL+ +Y + + L+++Y GP Sbjct: 61 VPNPNGDQSIRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 7/182 (3%) Query: 145 LNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISA 204 + AN WM P G D + + VF P+ ++ H V+ +T + + A Sbjct: 1 MAANAWMNTPRGFTLDASGNPVNV-DVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSAYEVAQVQPVKLAAMEGEWQT 262 LL GR F + F AI+ +Q LGDS A V QPVK AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTV--PFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKT 117 Query: 263 EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGR 322 P ++ D + +KIP L ILA S++ V GL ++ A P + Sbjct: 118 G-THMPEYMFGRLRSDGSISG-GIKIPQLDSILAGFSVNTKVTGLSSVPASDRPTATQAT 175 Query: 323 MA 324 +A Sbjct: 176 IA 177 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 374 AAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK-IDQHRWVLKMALWSLPL 432 A+ R Q W+F IMV GSLL+L+ L LR + + + W + A + Sbjct: 165 ASDRPTATQATIAHWAFDIMVTIGSLLVLLALWYGWCWLRHRGLPRSPWFFRCAAVAGAA 224 Query: 433 PWIAIEAGWFMTEFGRQPWAI 453 + +E GW TE GRQPW + Sbjct: 225 CLLTVECGWITTEVGRQPWIV 245 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 25/35 (71%), Positives = 30/35 (85%) Query: 111 VGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWIL 145 +GLFFFGW RL+K +HLL T+ VAFGSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWIF 35 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R QFA +HF+F ++GL L ++E +++ TG+ +Y ++ R+W K+F + Sbjct: 6 DPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAVV 65 Query: 63 F 63 F Sbjct: 66 F 66 >UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B0F5_9RHOB Length = 152 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD + QP K+ +EG W+T+P P ++A P Q N F + IP ++ Sbjct: 21 GDMRGLNTLEYQPAKVTEIEGNWETDPN-IPLLLLAIPNQGTRSNNFEIAIPNGAPLILK 79 Query: 298 HSLDKPVPGLKNLMAET----YPRLQ 319 H + PG + + E +PR+ Sbjct: 80 HKANGLAPGHNDFVLEDSTIMHPRVS 105 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 575 e-162 UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 574 e-162 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 538 e-151 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 518 e-145 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 499 e-139 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 490 e-137 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 489 e-137 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 486 e-135 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 483 e-135 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 481 e-134 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 480 e-134 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 478 e-133 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 475 e-132 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 470 e-131 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 462 e-128 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 462 e-128 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 455 e-126 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 451 e-125 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 449 e-124 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 448 e-124 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 439 e-121 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 437 e-121 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 435 e-120 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 435 e-120 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 434 e-120 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 432 e-119 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 432 e-119 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 431 e-119 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 431 e-119 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 430 e-119 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 426 e-118 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 424 e-117 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 416 e-114 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 415 e-114 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 414 e-114 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 413 e-114 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 412 e-113 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 411 e-113 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 410 e-113 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 410 e-113 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 407 e-112 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 407 e-112 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 405 e-111 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 402 e-110 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 401 e-110 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 401 e-110 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 400 e-110 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 398 e-109 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 395 e-108 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 393 e-107 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 389 e-106 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 386 e-105 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 384 e-105 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 384 e-105 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 383 e-105 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 382 e-104 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 382 e-104 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 380 e-104 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 380 e-103 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 379 e-103 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 378 e-103 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 373 e-102 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 371 e-101 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 363 8e-99 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 363 1e-98 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 362 2e-98 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 360 6e-98 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 359 1e-97 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 356 1e-96 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 353 1e-95 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 352 2e-95 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 352 3e-95 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 351 3e-95 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 350 6e-95 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 350 6e-95 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 342 2e-92 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 341 3e-92 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 334 6e-90 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 333 7e-90 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 333 1e-89 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 333 1e-89 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 325 2e-87 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 324 5e-87 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 323 1e-86 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 322 2e-86 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 321 4e-86 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 316 2e-84 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 315 2e-84 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 312 2e-83 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 311 4e-83 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 310 7e-83 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 306 1e-81 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 306 2e-81 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 300 9e-80 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 297 9e-79 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 289 1e-76 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 285 3e-75 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 284 4e-75 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 271 3e-71 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 271 6e-71 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 265 3e-69 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 262 3e-68 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 261 6e-68 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 255 3e-66 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 247 7e-64 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 245 3e-63 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 242 2e-62 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 240 1e-61 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 239 3e-61 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 229 2e-58 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 227 7e-58 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 221 8e-56 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 220 9e-56 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 217 1e-54 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 206 1e-51 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 181 5e-44 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 166 1e-39 UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 157 6e-37 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 156 1e-36 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 155 4e-36 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 142 3e-32 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 138 4e-31 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 136 3e-30 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 129 3e-28 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 125 6e-27 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 122 3e-26 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 119 3e-25 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 105 5e-21 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 92 5e-17 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 85 8e-15 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 82 4e-14 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 81 1e-13 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 78 8e-13 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 52 7e-05 Sequences not found previously or not previously below threshold: UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome b... 100 1e-19 UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive... 96 3e-18 UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like... 93 2e-17 UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales ... 87 1e-15 UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like... 87 1e-15 UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like... 86 2e-15 UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like... 84 1e-14 UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like... 81 8e-14 UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 79 5e-13 UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like... 79 6e-13 UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalob... 77 2e-12 UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibri... 76 4e-12 UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like... 75 4e-12 UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=... 75 8e-12 UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like... 75 9e-12 UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter c... 74 1e-11 UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like... 72 5e-11 UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like... 71 1e-10 UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfo... 69 6e-10 UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 64 1e-08 UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfuri... 62 7e-08 UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like... 62 8e-08 UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea Rep... 61 8e-08 UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulf... 58 8e-07 UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibiu... 55 5e-06 UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibri... 54 2e-05 UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubroba... 53 4e-05 UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobac... 52 4e-05 UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensi... 52 6e-05 UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales R... 52 7e-05 UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas in... 50 2e-04 UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp... 50 3e-04 UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=... 49 4e-04 UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobac... 49 5e-04 UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n... 48 0.001 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 46 0.004 UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chlorof... 46 0.004 UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinens... 44 0.012 UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcu... 43 0.019 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 292/511 (57%), Positives = 390/511 (76%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 V+DLSR QFA+TALYHFLFVPLTLG+ FLLAIME++YV+TGK +Y+DM +FWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+TMEFQFGTNW++YS+YVGDIFGAPLA+E L AFFLESTF+G+FFFGW RL+ Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K QHL VTWLVA GSNLSALWIL ANGWMQ+P GA F+ +T+RME+ F L+ NPV+QV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHTV +GYVTGA+F++AIS++YLL+ R+ A RSFAI S FG +I+ + LGD S Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 YEV +VQ KLAA+E EW+T PAPA F ++ +P ++++R FA+KIP +LGI+AT SLD+ Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+K+L+A+ R++ G + + L++E+ GN+ P + AF ++ DLGYG+LL +Y P Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 ++ + Q + A + IP VA +FWSFR MVG G +L++ + A + R + W+ Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 LK AL+SLPLPWIA + GWF+ E GRQPW I +LPT+ + S+L+TG L SLI ++ Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 TL L+ E+YLM ++ARLGPS++ + + +Q Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHTGRYHFEQ 515 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 313/513 (61%), Positives = 407/513 (79%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D+++LSR QFALTA+YHFLFVPLTLG+ FLLAIMET+YV++GK IY+DMT+FWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFALGVATGLTMEFQFGTNWS+YS+YVGDIFGAPLA+E LMAFFLESTFVGLFFFGW R Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L K QH+ VTWLVA GSNLSALWIL ANGWMQ P + F+ +T+RMEM SFSELV NPV+ Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 QVKFVHTV +GYVTGAMFI+ ISAWY+L+GR+ A RSFAI + FG A++ + LGD Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S YE+ VQ KLAA+E EW+T+PAPA F + P+Q++E N FA++IP LGI+AT S+ Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D PV GLK LM + R++ G A+ L++++ G+ + V F ++ DLGYG+LL RY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + + Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I G Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 LYTLFL+AE++LM K+ARLGPS++++ + +Q Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 265/512 (51%), Positives = 351/512 (68%), Gaps = 2/512 (0%) Query: 1 MWD--VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKL 58 M D V++LSR QFA+TA+YHF+F PLT+GL FLL IME++YV+TGK I+R MT FWG L Sbjct: 16 MIDSTVVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVL 75 Query: 59 FGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGW 118 FGINFA+GV TG+ MEF+FG NWS+YS+YVGDIFGAPLA+E LMAFFLE+TF+GLFF GW Sbjct: 76 FGINFAMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGW 135 Query: 119 QRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNP 178 RL+K QHL+ TWLVA GSN SALWIL ANGWMQ P GA F+ DT+RME+ F ++FNP Sbjct: 136 NRLSKVQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNP 195 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 V+Q KFVHTV AGYV GA+F+M+ISA+YLLRG+ +A RSFA+ + FG L+ + + LG Sbjct: 196 VAQAKFVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLG 255 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D S Y ++ Q +KLAA+E W+TE APA F P Q RN +A+KIP L+G++AT Sbjct: 256 DESGYAASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATR 315 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 SLD+P+PG+ L+ R++ G++A+ +Q I + + F DLG+G+LL Sbjct: 316 SLDEPIPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLK 375 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 RY D+ + T Q A +P+V P+FW+FRIM G L+ +A + + Sbjct: 376 RYRDDIGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQE 435 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 RW L +ALW+LPLPWIAIE GWF+ E+GRQPWA++ +LPT+ A S L ++ +L+ Sbjct: 436 KRWFLSLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGF 495 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 LYT L+ + L K GP + P Sbjct: 496 TALYTTLLVIAIKLSLKTINKGPEVLFPPMPP 527 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 518 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 254/519 (48%), Positives = 345/519 (66%), Gaps = 8/519 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +V+DLSR+QFALTALYHF+FVPLTLGL F+LA MET+YVVTG+ IY+DM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+TMEF+FGTNWS YS++ GD+FG PLA+E LMAFF+ESTFVGL FFGW RL+ Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+LVA GSNLSALWIL AN M P GAHFD +T+RM+ SF LVFNP +Q Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHT +AGYV+ AMF+M ISA+YLLRG+ R A RSF + ++FG ++ + + LGD Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAP-APFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AA+EG W T P P+ + A P+ ++ N F + +P +L L TH+ D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +P+ G+ L PR++ G A ++ + + L F E D+GYG+L +R+A Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSDAD-LTLFTQHEQDMGYGLLAARHA 365 Query: 362 P--DMNHVTAAQYQAAMR----GAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 P D+ ++ Q ++ +P V FWSFR MV + I+ +L+ + Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 ++ ++ +LK+ +WS+PLP +A E GW E GRQPW + LPT+ + S+ + FSL Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 I V LY++F+ AE+YLM K+ARLGP E Q Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGPEHDSMEPHAQHDA 524 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 205/515 (39%), Positives = 286/515 (55%), Gaps = 16/515 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++ LSR+QF +TA YHFLFVPLTLGL ++AI++TIY+ T Y ++ F KLF I Sbjct: 1 MDLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATGLTMEF+FGTNW YS VGDIFGAPLA+E LMAFFLESTF+GLF FG R+ Sbjct: 61 NFAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD--IDTLRMEMTSFSELVFNPV 179 + H W+VA GS LSALWIL AN WMQ P G ++ +T+F E N Sbjct: 121 SDVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S ++F+H V AGY+ G F+M + A+YLL+G+ +A +F + I + GD Sbjct: 181 SIIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 Y+V+ QP+K+A MEG+W+TE A ++ +Q+++ LKIP LL IL+ H Sbjct: 241 IHGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHD 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + G+K+L+ E + Q R P + Q + LE + + Sbjct: 300 PNAEFKGIKDLVKEYQQKAQEA------------SARIPVLEQKLKELEATNASQEEIQK 347 Query: 360 YAPDMNHV-TAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 D+ + A+ +P VA VF +F +MV G V++ L+ +G + Sbjct: 348 VKDDLAMAKSQAKAYNITFNDLPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 ++ L L S+PLP+IA GW E GRQPW +Q +L T S T + FS+I Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + +YTL I Y M K + GP +SE + Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKSEPIPPYE 502 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 215/511 (42%), Positives = 333/511 (65%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 ++++LSR+QFALTAL+HFLFVPLTLGL ++L IM ++YV TG IY+DMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+T+EF+FG NW+++S +G F LA+E + AF LE+T GLFFF W ++ Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+L+A G++LS + IL AN WMQ PT F+ + +E+ S L N ++Q+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H G++TG++F+M +SA+Y+L GR+ A RSFA+G FG + + GD + Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+ +P K+AA+E +WQT+ PA + ++A+P Q +++N F + IP L ++ATHSL Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 VPG LM R++ G +A+ M+++ + P + + DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + + T A+ +AA R IP +A FWSFR M G L+LL+++ R + QHR Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 L+ AL+++PLP++A E GW + E GRQPW++ +ILPT+ + S ++ + SL+ + Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + + E++LM KYAR GPS++++ + ++ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLETGRYYFER 516 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 197/512 (38%), Positives = 278/512 (54%), Gaps = 25/512 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++DLSR+QFA TA+ HF+FVPLTLGL +AI++TI T Y + F KLF + Sbjct: 1 MDLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA GVATGLTMEF+FGTNW YS +VGDIFGAPLA+E LMAFFLESTF+G+F FG R+ Sbjct: 61 NFAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRI 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHF--DIDTLRMEMTSFSELVFNPV 179 + H W+VA GSNLSALWIL AN WMQ P G +R E+T+F E V N Sbjct: 121 SDGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKIVQTPQGIRAELTNFWEAVINHT 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + ++ +HTV AG +T F+M + A++LLR + ++A + +F + + + +GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 ++ + VA+ QP+KLA MEG+W TE PA V + +Q ++ ++IP LL L+ H+ Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTEQ-PASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 D V G+ +L+ + Q ++ N P + Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDKI--------------- 344 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 + A+ +P + VF F IMVG G V L L +G + + Sbjct: 345 ----VADKAYAKAYNISLKDLPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 + LK L+S+PLP+IA E GW E GRQPW + +L T A S +T + FS++ V Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 +Y L V M K + +E P+ Sbjct: 461 TIYILLFYVYVTTMIKKVK---EYEDTEAPST 489 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 213/511 (41%), Positives = 307/511 (60%), Gaps = 14/511 (2%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 ID SR QFALTA+YH+LFVPLTLGL ++ I+ET Y T K +++ + FW KLFGINF Sbjct: 35 TIDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQKLFGINF 94 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW++++ Sbjct: 95 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFFGWKKVSA 154 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G+ +SA WIL AN WMQYP G F+ DT+R EM SF ++ +P + K Sbjct: 155 GFHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVALSPFAVDK 214 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F HTV + ++ GA+F++ +S+WYLL+GRE+ +A++S IG++ G A + GD+SAY Sbjct: 215 FFHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAALTGDNSAY 274 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQ------DQERNAFALKIPALLGILAT 297 +VAQVQP+KLAAME + + V P + + + + +P L +LAT Sbjct: 275 QVAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPKALSVLAT 334 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 H D VPG+ NL+ + G + +++ +G LQ +R + D Sbjct: 335 HDFDGYVPGINNLIDGYV--KEDGTKEPSVAEKMQRGRMAITALQQYRAGKKDEAT---- 388 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + D Y + +P + FWSFR+MVG G L +L LI+ + R I Sbjct: 389 RKTLTDNIKYFGYGYVKSADQIVPNIPLNFWSFRVMVGLGILFILFFLISGHVSWRKDIS 448 Query: 418 Q--HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 + RW+ A+ +PL ++A EAGW + E GRQPW IQD+LPT+ A S L G + + Sbjct: 449 EKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDMLPTWVAVSDLNAGSVMITF 508 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQS 506 + + L+T L E+ ++ K + G A Sbjct: 509 FLFLALFTTMLAVEINILFKQIKKGMEAPAV 539 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 206/522 (39%), Positives = 306/522 (58%), Gaps = 23/522 (4%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + SR QFALTA+YH+LFVPLTLGL ++AI+ETIY GK ++ +FW KLFGINFA Sbjct: 9 VSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINFA 68 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++K Sbjct: 69 IGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSKG 128 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 HL TWL G++LSA+WIL AN WMQ P G F+ DT+R EMT F LVF+ + KF Sbjct: 129 FHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINKF 188 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRG--RERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 HT+ + + G++F + + YLLR + ++ AL++ I + FG A + T GD+SA Sbjct: 189 WHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTSA 248 Query: 243 YEVAQVQPVKLAAMEGEWQTEPA----------PAPFHVVAW-------PEQDQERNAFA 285 Y VAQ QP+KLAAMEG + + P + P+ D+E F Sbjct: 249 YNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLFN 308 Query: 286 LKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFR 345 + +P +L +L T + VPG+ N++ Y + G A + + +G R L + Sbjct: 309 VSVPRVLSVLGTRNPSGYVPGINNILEGGYVKAD-GTTAIPVDSMMQRGRRAIMALNDYS 367 Query: 346 GLE--GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLV 403 + GD+ + + Y +P + ++SFRIMVG G L +L+ Sbjct: 368 KAKQAGDMEAALQHKSVIDENFPYFGYSYIQHKNDIVPPIGLTYYSFRIMVGLGMLFILL 427 Query: 404 MLIALVQTLRG-KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 L+A + + + K + RW +A+ +PL W+A ++GW + E GRQPW IQD+LP +A Sbjct: 428 FLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPWTIQDLLPVQAA 487 Query: 463 HSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAM 504 S L G + + + + L++ L+AE+ +M+K + GP Sbjct: 488 VSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPETE 529 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 226/509 (44%), Positives = 309/509 (60%), Gaps = 9/509 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL + AIMETIY TG ++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ LSALWIL AN WMQYP G HF+ DT+R EM F + +PV+ Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++G++ GA+F++ IS WYLL+ R AL S + ++FG +A I + GD SA Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAW------PEQDQERNAFALKIPALLGILA 296 Y+VAQ QP+KLAAMEG ++ + +Q F +K P LL LA Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNGVGLVGIGILNPAKTSYLDNQNAFIFDIKFPKLLSFLA 307 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGL--EGDLGYG 354 ++ VPG+ NL+ Y +G +A ++I +G L +R + D Sbjct: 308 ERDINAYVPGIVNLIEGGY-TTNKGTVALSAKEKIEKGKAAIKALADYRKAVKDKDTAAA 366 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 + Y IP V F+SFR+MV G +L+ +I L+ +G Sbjct: 367 GQYRVTLEENFPYFGYGYIKDPAELIPHVGLTFYSFRVMVILGCFFILLFIITLIWDKKG 426 Query: 415 KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFS 474 KI RW+ + LWS+PL +IA +AGW + E GRQPWAIQDILPT ++ S L + + Sbjct: 427 KIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQPWAIQDILPTSASISKLNPSSVQTT 486 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 + + L+T+ LIAE+ +M K + GP A Sbjct: 487 FYLFLILFTILLIAEIGIMVKAIKKGPEA 515 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 214/505 (42%), Positives = 303/505 (60%), Gaps = 12/505 (2%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 +D SR QFALTA+YH+LFVPLTLGL ++ IMET Y T K +R +FW +LFGINF Sbjct: 12 TVDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINF 71 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW +++ Sbjct: 72 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSA 131 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G+ LSA WIL AN WMQYP G F+ +T+R EMTSF ++ +P + K Sbjct: 132 GFHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDK 191 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F HTV + +V GA F + +S WYLLR R +A +S IGS+ G +A + G SAY Sbjct: 192 FTHTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAY 251 Query: 244 EVAQVQPVKLAAMEGEWQTE-----PAPAPFHVVAWPE-QDQERNAFALKIPALLGILAT 297 VAQ QP+KLAAME ++ A + + P+ ++ + +P +L ILAT Sbjct: 252 MVAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILAT 311 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 S VPG+++++ G L ++ +G + L+ +R + +L Sbjct: 312 KSTTGYVPGVRDIIKGY--TKADGTKEPSLKEKQERGKKAIQALKDYRAGKDKESNEKIL 369 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 Y +P + FW+FRIMVG G L +LV + L + I Sbjct: 370 DHDM----KYFGYGYIKDANQLVPFIPINFWAFRIMVGLGGLFILVFAVMLFLLYKKDIT 425 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 + RW+ + + +PL +IA E+GW + EFGRQPW IQD+LPT++A S L++G +AF+ + Sbjct: 426 RPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDLSSGGIAFTFFL 485 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPS 502 + L+T L AEV +M K + GP+ Sbjct: 486 FLVLFTAMLTAEVSIMCKQIKKGPA 510 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 241/572 (42%), Positives = 333/572 (58%), Gaps = 63/572 (11%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 +DL+R QF LTA +HFLFVPLTLGL ++L ME +Y+ TGK +Y+DM +FWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 LG+ TGLTMEF+FGTNWS+YS VGDIFG PLA+E L AF LESTF GLFFFGW +L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 QHLL T+ +A GS+ SAL IL ANG+MQ+P G+ F T+RME S +L N +Q F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H + AGY T A+F++ ISA+YL+RGR+ A RS AIG FG + I + GD++ + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 +VQP+K+AA+E EW T APA F+ VA P Q +++N F + IPA+LG++ATHS D + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 PGLKNLM-------------AETYPRLQRGRMAWLLMQEIS--QGNREPHVLQAFRGLEG 349 PG+K ++ Y ++ G+ A + ++ + E EG Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIKEG 375 Query: 350 DLGYGMLLS-------RYAPDMNHVT---------------------------------- 368 L Y LL PD ++ Sbjct: 376 GLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATIAK 435 Query: 369 ----AAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH---RW 421 +A +P VA VFWSFRIMV G + ++++ L+ R + + R+ Sbjct: 436 AANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFSRF 495 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 +L++ +WS+PLP+IA AGW++TE GRQPW + D LPT + SALT + S+ + + Sbjct: 496 ILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFFLI 555 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 T V+LM KYARLGPS++ + + +Q Sbjct: 556 DTALFAVMVFLMFKYARLGPSSLGTGKYYFEQ 587 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 221/505 (43%), Positives = 310/505 (61%), Gaps = 15/505 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL ++ +MET YV TGK +++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ +SA WIL AN WMQYP G F+ +T+R EM F+ + +P++ Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++ ++ GA+F++ IS WYLLR R++ AL S + + G A + T GD S Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+VQP+K+AA EG PF + LKIP +L ILATH +D Sbjct: 248 VQVAKVQPMKMAAAEGL-HDGGNGVPFTIAG-----------DLKIPKMLSILATHDIDG 295 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--GDLGYGMLLSRY 360 VPG+ NL+ Y + G A ++I +G L AFR GD + Sbjct: 296 YVPGINNLLEGGYQ-MPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + Y +P V FWSFRIMVG G +L +I L+ + + K+ R Sbjct: 355 LDENVKYFGYGYIKDPAHLVPNVGLTFWSFRIMVGLGGYFILFFIIVLIVSKKEKLADMR 414 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+ ++ALW++PL +I +AGW + E GRQPWAIQD+LP +A S L TG + + + + Sbjct: 415 WLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFIFLL 474 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQ 505 L+T+ L AE+ +M K + GP ++ Sbjct: 475 LFTVLLFAEIGIMLKAIKKGPEGIK 499 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 184/502 (36%), Positives = 262/502 (52%), Gaps = 59/502 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + L+R QFA T L+HFLFVP+++GL+F++A+MET+Y+V +Y M +FWG LF I Sbjct: 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFF+ES F+GL+ FGW RL Sbjct: 61 NFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H L WLV+FG+ +S+ WIL AN +MQ P G F I R EM F L+ NP Sbjct: 121 PKKIHALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLW 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 V+F H + TGA FI +SA+ LL+ +E +SF + + G A +G G Sbjct: 179 VEFPHVIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A + + QP+K+AA EG W+ PA + A + E+++ +K+P L LA Sbjct: 239 AEHLMESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFS 298 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V G+K L AE + +G+ P V F Sbjct: 299 GSVKGMKTLQAEYE-------------KIYGKGDYIPPVKTTFWSF-------------- 331 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 RIMVG G +++L L L R K++ +W Sbjct: 332 -----------------------------RIMVGAGVVMILAALGGLWLNRRKKLENSKW 362 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVG 480 L++ + + P++A AGW MTE GRQPW + ++ T + S +T G L FS+I Sbjct: 363 YLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGV 422 Query: 481 LYTLFLIAEVYLMQKYARLGPS 502 +Y + V+L + + G Sbjct: 423 MYMILGALLVFLFIREIKKGAE 444 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 209/500 (41%), Positives = 279/500 (55%), Gaps = 60/500 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+RWQF +T++YHFLFVPLTLGL L+AIMETIYV TG Y++M RFWG+LF I Sbjct: 1 MDALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EF FG NWS YS +VGDIFGAPLA+EAL AFFLESTF+GL+ FGW++L Sbjct: 61 NFAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H WLVAF SNLSA WIL AN +MQ P G F + R EMT F L+ NP Sbjct: 121 SPALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F HTV+AG+VT A F+M ISA++LLR + RSF + + G + + +G Sbjct: 179 YQFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP+K+AA E W + PAP +VA +Q+ ++N +KIPAL LA +S Sbjct: 239 GQHLVATQPMKMAAAEALWDS-ADPAPLALVALVDQENQQNNLEIKIPALTSFLAYNSFR 297 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GLK L A ++ GN P V F Sbjct: 298 GEVKGLKELQA-------------AAAEQYGPGNYIPPVAPVF----------------- 327 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 WSFR+M+ G L+L+ L +L +G ++ Sbjct: 328 --------------------------WSFRLMIAAGLWLILLSLYSLYLWRKGLLESRPL 361 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVG 480 VLK LWS+P+P++A AGWF+ E GR PW + + +A S ++ + +L+ Sbjct: 362 VLKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTTLVAFTL 421 Query: 481 LYTLFLIAEVYLMQKYARLG 500 LY L + +VYL+ KYAR G Sbjct: 422 LYGLLAVVDVYLLAKYARQG 441 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 182/518 (35%), Positives = 267/518 (51%), Gaps = 52/518 (10%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++D++RWQF +T +YHFLFVPLT+GL L+A+MET ++ T + + + +F+GKL I Sbjct: 1 MDILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+ WLV G+ SA +IL AN WMQ+P G ++ DT R E+T F ++ N V Sbjct: 121 PRKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLG 238 + F H ++A Y+T A FI+ ISAW R+R++ +G+ +A +G G Sbjct: 181 ITFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAP-APFHVVAWPEQDQERNAFALKIPALLGILAT 297 D + VQP+K+AA E +QT+ APF V D + ++L +P +L LA Sbjct: 241 DIQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAE 300 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 D V G+ +L AE + Sbjct: 301 GDTDATVEGIDDLRAEYQETYGQD------------------------------------ 324 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + P + +WSFR+M+G G+L+ + L T +G+ Sbjct: 325 -----------PGAAYYSPGDYTPYIPVTYWSFRLMIGLGALMAAGAALVLWLTRKGRAP 373 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLI 476 RW M L L +A GW TE GRQPWA+ ++ T S ++ + S++ Sbjct: 374 TARWFAPMVLSLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 ++ LY + + EV L+ KY R G + +G Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKGADPFEEPPDPTLRG 471 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 191/509 (37%), Positives = 265/509 (52%), Gaps = 47/509 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI----YRDMTRFWGK 57 D + L+R QFALTA+YHFLFVP+TLGL LLAI+ T + Y + F+ Sbjct: 1 MDAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 LF INFA GV G+ +EF+FGTNWS YS VGDIFGAPLA+EA+ AFFLES F+G+ FG Sbjct: 61 LFAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 R++ + TW+VA G+NLSALWIL AN W Q P G F ++ + + SF + V N Sbjct: 121 RDRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTPKG--FYLEGGKAYLASFFDAVVN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 + +FVH +AG +TGA+F+ ISA+Y+L+ + +VA SF I G +A + + Sbjct: 179 YSTPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIA 238 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD Y+VA+ QP+KLA ME +W+TE V ++IP LL ILA Sbjct: 239 GDLHGYQVARTQPLKLAMMEDKWETESGAGLEIV------------PGIEIPKLLSILAY 286 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 H D V G+K+L+ + +G+ L Sbjct: 287 HDPDAKVYGIKDLVQTFQ-----------------------------KIAKGEEVGEDEL 317 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 D Q IP FWS R MV G + + + T++ I+ Sbjct: 318 PELWLDPRQFAGRQSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIE 377 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 Q RW+LK+ +S+PLP +A GW + E GRQPW + IL T A S L GQ+ S+I+ Sbjct: 378 QRRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIIL 437 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQS 506 +Y + + + LM + GP + Sbjct: 438 FSSIYFIVFLIFLGLMVQKVIKGPKRPEE 466 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 206/524 (39%), Positives = 306/524 (58%), Gaps = 29/524 (5%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +++ +R QFA+TAL+HF FVP TLG+ F++A ETIYV TGK ++++T+FW +FGI Sbjct: 4 YSMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLIFGI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+E ++AFFLE+TF + FFGW+R+ Sbjct: 64 NFAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGWKRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTG--AHFDIDTLRMEMTSFSELVFNPV 179 +K HL +WL+A GSNLSALWIL ANG+MQ+PT ++ID R+EMT F ++ PV Sbjct: 124 SKGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMITQPV 183 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 +QVKF+H V + Y A+F++ IS+ YLLRG+ ++ A +S + + FG +A I T +GD Sbjct: 184 AQVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAVIGD 243 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP--------EQDQERNAFALKIPAL 291 AYEVA QP K+AA EG E AP + P + E AF +++P + Sbjct: 244 EHAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIELPGM 302 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--- 348 L +L ++ VPGLK+L+ W + ++G + L+A+ + Sbjct: 303 LSLLGKRDINAFVPGLKDLV-----NGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANG 357 Query: 349 ---GDLGYGMLLSRYAPDMNHVT-------AAQYQAAMRGAIPQVAPVFWSFRIMVGCGS 398 G + D+N V Y P VAPVF+SF IMV G Sbjct: 358 DKAGMEAAKAEFYKVVADVNGVKVTRADLMGYGYLTDPTKLYPPVAPVFYSFHIMVALGF 417 Query: 399 LLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP 458 +L+ L+A V L+G + + V K+A+ S+PLPWI GW E GRQPW + +LP Sbjct: 418 WFILLFLLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVFGVLP 477 Query: 459 TYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 T + + + + + + + + + IAE+ ++ + GP Sbjct: 478 TSESVTPIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPK 521 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 200/515 (38%), Positives = 280/515 (54%), Gaps = 61/515 (11%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M++ +DL+R QFALT++YH+LFVP TLG+ +A +E YV TGK +Y+ M +FWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+EALMAFFLESTF+G++ FGW R Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L+K H LV VA G+NLSA WIL AN +MQ+P G F + R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 +F H V+ G +T + IMAISAW+LLR RS G V + G Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALAGHH 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + +VQP+K+AAME W+T+ PAPF +VA + ++N AL+IP L L +S Sbjct: 239 QGQYITKVQPMKMAAMEALWETQ-DPAPFSLVANIDTKAQKNTGALEIPGGLSFLTQNSF 297 Query: 301 D-KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 V G+K+L A++ + GN P V F Sbjct: 298 TSGKVEGIKDLQAKSEA-------------QYGPGNYIPDVPAIFWT------------- 331 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 FR+MV GSL+LLV + L+ + K+ ++ Sbjct: 332 ------------------------------FRVMVAAGSLMLLVAFVGLILNAKDKLVEN 361 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMI 478 R LK+ W LPLP+IA GWF+ E GRQPW + + T S ++T ++ ++I Sbjct: 362 RTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTTIIGF 421 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +Y + IA +YL ++ + GP S +++ Sbjct: 422 TLVYIVAAIAAIYLAVEHIKKGPDGNPSHDVVEKE 456 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 171/514 (33%), Positives = 272/514 (52%), Gaps = 58/514 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + ++RWQF +T +YHFLFVP+T+G+ F +AI ET +V T K +Y T+FWGK+F I Sbjct: 1 MDPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLAMEAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H WLV+ G+ LSA +I++AN +MQ+P G + D R EM ++ P++ Sbjct: 121 SPRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNM 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H + ++GA I++++L++ R+ V + G V + + + GD Sbjct: 181 WAYSHVIAGAILSGAAMFAGIASYFLMKKRDVEVFRPAVRFGLVGMLIGSLAVIVTGDLL 240 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A + VQP+K+AA E W T A F + D F++++P +L +AT S Sbjct: 241 AKVMTDVQPMKMAAAEALWDT-TEGASFSLFTIGTLDGSSEVFSIRVPGVLSFMATESFS 299 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V G+ ++ A+ ++ G+ P + A+ Sbjct: 300 GTVEGINDVQAQFE-------------EQYGPGDYRPIIPVAYWMF-------------- 332 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 RIM+G G ++LLV ++ L T +G++ + + Sbjct: 333 -----------------------------RIMMGAGFVMLLVSIVGLWLTRKGRLPESKT 363 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYS-AHSALTTGQLAFSLIMIVG 480 V ++A++++ P + AGW TE GRQPW + + T +++ G + SLI+ Sbjct: 364 VWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLIIFTL 423 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 LY + + EV L+ KY ++GP + Q + ++G Sbjct: 424 LYGILAVVEVGLVVKYVKIGPPSEQEALASIRRG 457 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 169/528 (32%), Positives = 250/528 (47%), Gaps = 74/528 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+FVPLT+GL +LA+M+T +VVT + +TRF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFF ESTF+GL+ FGW RL Sbjct: 61 NFAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+VA N SA +I+ AN +MQ+P GA ++ ++ R E+T F L+ N + Sbjct: 121 PRLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAV 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE---------RNVALRSFAIGSVFGTLAII 232 F H V +T F+ +SA+ ++R + R + + GS+ +A + Sbjct: 181 WAFQHAVAGALLTAGAFVAGVSAFLMVRAQRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALL 292 G GD + QP+K+A+ E T P + + + L +P +L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GILATHSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 LA + G+ +L A+ R G+ P++ + Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERF-------------GPGDYRPNLFVTYWAF---- 343 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 R M+G + + L+ + T Sbjct: 344 ---------------------------------------RAMIGLLLVPVAFALVTVWLT 364 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI--------LPTYSAH 463 RG+I RW + ++P P++A AGW TE GRQPW + + Sbjct: 365 RRGRIPHQRWYGWAGVLTIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRMTVQDGV 424 Query: 464 SALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 S + G + FSL+M +Y + LM++Y GP SE Sbjct: 425 SNHSAGMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQEHDSEPAPP 472 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 192/513 (37%), Positives = 276/513 (53%), Gaps = 67/513 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR+QFA+T YHFLFVPLT+GLI L+A MET +V T +YR M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLA+EAL+AFFLESTF+G++ FG + Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++ W+VA G+N+SALWI+ ANG+MQ P G + R+E+ +F E+V NP + Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVG--YIERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 FVHTV++ Y+ GA F+MA+SAW+LLR + +SF G + G +A T +G Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGH- 255 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 K A+ + Q A + A E + ++IP Sbjct: 256 -----------KSASFAAKMQPAKGAA---LEAVWETKESLPFHIVQIP----------- 290 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 P+ +R + +L + ++ G Sbjct: 291 --------------DPKNERNIVEFLTIPKLGSYFYTHSFDGKVVG-------------- 322 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + + P V VF+SFR+MV G + + + K+ + + Sbjct: 323 -----------FDQIPKDERPNVNIVFYSFRLMVALGLYFVALFWYGFYLYRKNKLVESQ 371 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 LK+ ++S+ LP++AI AGW + E GRQPW + ++ T A S ++ Q+ FSL+ +V Sbjct: 372 RFLKLVMYSVLLPYVAINAGWVVAEVGRQPWTVYGLMRTAEAVSPISLSQIIFSLVSLVL 431 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 YT+ LIA+VYLM KYA+ GP + + + Q Sbjct: 432 FYTILLIADVYLMLKYAKKGPYTSAATKGGEIQ 464 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 183/529 (34%), Positives = 264/529 (49%), Gaps = 51/529 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D ++RWQF +T +YHF FVP+T+ L L+A+M+T+++ T Y +T+F+GKLF I Sbjct: 1 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTFVGL+ FGW++L Sbjct: 61 NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL +L A G+ +SA++IL AN WMQ P GA ++ T R E+T F ++ NPV + Sbjct: 121 PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYL---LRGRER------------NVALRSFAIGSVF 226 FVH + + Y I AI+ W+L RGR + G+ Sbjct: 181 ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV 240 Query: 227 GTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAL 286 +A +G + GD + QP+K+AA E +Q + F V+ +D +AL Sbjct: 241 LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNT---SDFSVLTIGNKDGSEEVWAL 297 Query: 287 KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 KIP +LG L V G+ L + R + Sbjct: 298 KIPGMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQ----------- 346 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 +V + A P V +W+FRIM+ G + L+ L+ Sbjct: 347 -------------------NVLRQKIDANGIKLEPNVPLSYWTFRIMITLGMIGGLIGLV 387 Query: 407 ALVQTLRGKIDQHRWVLKMALWSLP-LPWIAIEAGWFMTEFGRQPWAIQDILP-TYSAHS 464 L+ G+ + L + + +LP LP AI GW TE GRQPW + +LP T + Sbjct: 388 MLIAMRGGRNPKPHGWLTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTAAVSP 447 Query: 465 ALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG-PSAMQSEQPTQQ 512 ++ G + FS I +Y + + EV L K + G P +QP + Sbjct: 448 NVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELSTRDQPVTE 496 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 172/512 (33%), Positives = 259/512 (50%), Gaps = 59/512 (11%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSRWQFA T +YHFLFVP+T+GL ++AI++T +G Y + F+GKLF INF Sbjct: 6 TVLLSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINF 65 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ EFQFG NWS YS YVG+IFG PLA+E L+AFF+ESTF+G++ FG R+ + Sbjct: 66 AIGVVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPR 125 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL WLV+ G+ LSA +IL AN WMQ+P G D T + MT+F ++ N + V Sbjct: 126 RVHLASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVT 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRE-RNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 HT++A ++TG+ ++ IS W R E R V + + ++ + G Sbjct: 186 LFHTLLASFLTGSALVLGISLWQYHRSTETREVFAAGARVSLIVMLISALLMGLDGHIDG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ QP+KLAA E + T + + D + F++ IP +L +LAT + Sbjct: 246 QVIAETQPMKLAAGEALYNTSRGASESILTIGNLHD--KPIFSIGIPHVLSLLATDHWNG 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+ L A ++++ G+ P V + Sbjct: 304 VVQGINQLQA-------------AMVRQYGPGSYIPPVALDYW----------------- 333 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 SFRIM G G++++L+ L +++Q RW Sbjct: 334 --------------------------SFRIMAGIGAVIILIALWGGWLLYHHRLEQSRWF 367 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 K+ALW++PLP+IA GW TE GRQPW + +L T S L+ + +L+ LY Sbjct: 368 AKVALWTIPLPFIANTTGWIYTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTVLY 427 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 + + ++ LM +Y R + + G Sbjct: 428 GILAVVDISLMVRYGRRSLEPGADTETEHEVG 459 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 249/559 (44%), Gaps = 103/559 (18%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+ VPLT+GL ++AIM+T++ VTG + T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +V D+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL WL A G SA +I+ AN WMQ+P G +D + R M F ++ N + Sbjct: 121 PRKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE----------------------------- 212 F H + ++T F+ A+ W++ R Sbjct: 181 AAFPHVLAGAWLTAGTFVAAVGIWWMARNTWRAKKLREAIETGDTSGMPKTTSPSQIDAT 240 Query: 213 --------RNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP 264 R + ++ + GD A + + QP+K+A+ E + Sbjct: 241 PEDLERDARQLWRPVTRFSLWIIMISGVALFITGDLQAQIMFKQQPMKMASAESLCDSTT 300 Query: 265 APAPFHVVAWPEQDQERN-AFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRM 323 A APF V++ Q+ N ++IP +L LA H D P+ G+ L + LQ Sbjct: 301 AGAPFSVLSIGRQNNCDNVDHVVEIPGMLSFLADHRFDTPLQGVNQLQVQYQEALQ---- 356 Query: 324 AWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQV 383 + N P++ + G Sbjct: 357 -------MPGQNFAPNLFVTYWG------------------------------------- 372 Query: 384 APVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFM 443 FR M+ ++V L L T R ++ + R +AL +P P++A +GW Sbjct: 373 ------FRAMITWALGSVVVALGGLWLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIF 426 Query: 444 TEFGRQPWAIQD-----------ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYL 492 TE GRQPW + + S T + +LI LY + L Sbjct: 427 TEMGRQPWVVAPNWQDNLDPTRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFML 486 Query: 493 MQKYARLGPSAMQSEQPTQ 511 ++Y GP+ + P + Sbjct: 487 QRRYVIEGPATYDAIPPDE 505 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 173/535 (32%), Positives = 258/535 (48%), Gaps = 72/535 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+RWQFA+T +YHF+ VPLT+GL L+A M+T +VVT + +T+F+GKL I Sbjct: 1 METLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG WS YS +VGD+FGAPLAMEAL AFF+ESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 +K HL WL+A +NLSA +IL AN WMQ+P G ++ T R EM S ++ N Sbjct: 121 SKKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLR----------GRERNVALRSFAIGSVFGTLAI 231 F HT+ A ++ F+ I+ W+++R R+ + +G++ ++ Sbjct: 181 AAFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSG 240 Query: 232 IGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA-PFHVVAWPEQDQERNAFALKIPA 290 IG GD + + QP K++A EG ++E A V + + +P Sbjct: 241 IGVGISGDVQGRLMYEQQPGKMSAAEGLCESEEGAAFSLLTVGPWNPTCDDLTRVISVPG 300 Query: 291 LLGILATHSLDKP---VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGL 347 + L T P +PG+ ++ E R Sbjct: 301 VASFLGTGHFSGPESALPGVNDVQREMEARF----------------------------- 331 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 A P + +WSFR+M+G + + L A Sbjct: 332 --------------------GATDEAGNPISYTPPLGITYWSFRLMIGLAAFSAALALWA 371 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD---------ILP 458 L T RG+ + W+ ++A+ ++P P++A GW TE GRQPW + +L Sbjct: 372 LWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPNPTGIDQVRLLT 431 Query: 459 TYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +A+ G + SLI+ LY + L+ +YA G + E P + Sbjct: 432 ERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYAIEGVPQVHDESPEARA 486 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 175/554 (31%), Positives = 262/554 (47%), Gaps = 87/554 (15%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +D++RWQF +T +YHFL VPLT+GL L+A+++T ++ K Y MT+FWGKLF I Sbjct: 1 MEALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF LGVATGL EFQFG WS YS +VGD+FGAPLAMEAL+AFF+ESTF+GL+ FGW++L Sbjct: 61 NFILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 HL+ W+ GS +SA +IL AN WMQ+P G R MT + N + Sbjct: 121 PAKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVGVTV--VDGRPRMTDAWAVFTNNTAL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR------------------------------ 211 V F HT+ F++ IS ++L + R Sbjct: 179 VAFPHTIFGALAVAGGFLLGISWYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPGR 238 Query: 212 ---ERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAP 268 + V +RS IG+V +A GT GD + + QP+K+AA E Q + + Sbjct: 239 DKTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNGTSFSV 298 Query: 269 FHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLM 328 + ++ A ++IP LL LA V G+ +L+ E + Sbjct: 299 LSIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPEYQAKYGTNL------ 352 Query: 329 QEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFW 388 ++ +P +A +W Sbjct: 353 -----------------------------------PDNPIYGDRAGQPIQYVPVMAVTYW 377 Query: 389 SFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGR 448 FR+M+G G + L +A RG + + +W++++A++ + P+ A AGW TE GR Sbjct: 378 GFRMMIGFGGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFTELGR 437 Query: 449 QPWAIQD-----------ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYA 497 QP+ + + + ++ G+L FSL+ V +Y + LI EV+L+ KY Sbjct: 438 QPFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLLFKYV 497 Query: 498 RLGPSAMQSEQPTQ 511 R G + E T Sbjct: 498 RGGVLSAMPELATP 511 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 167/500 (33%), Positives = 266/500 (53%), Gaps = 55/500 (11%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + L+R QFA T ++HF FVP+T+G++FL+AI E+IYV TG Y+ +T+F+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EFQFG NWS YS++VGD+FG LA+EAL+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDID---TLRMEMTSFSELVFN 177 +NK H++ WLV+ G+ +SA WIL+AN +MQ+P G + + + EM F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P +F H V GA I I++W +LR E + ++F + V + +G Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G S + + P+K+AA E ++ APF V+A +Q Q++ L++P +L LA Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + + G+K+L E + ++ + I P + +FR + G +G Sbjct: 301 DKFEGSLKGMKSLQKEMDEK-----YYPVVGKHIDYTPHVPTIYYSFRIMSGSVG----- 350 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 +L+L+ L+ + + + Sbjct: 351 -----------------------------------------ILILMALLGTIYSFKRTET 369 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 + RW L++ W+L + +A GW M E GRQP+ I ++ T S S + + FSL++ Sbjct: 370 KKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLFSLLV 429 Query: 478 IVGLYTLFLIAEVYLMQKYA 497 LYT+ I + Y+ +YA Sbjct: 430 FCVLYTILGITQ-YIAFRYA 448 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 172/510 (33%), Positives = 246/510 (48%), Gaps = 59/510 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DLSR+QFA T+++H+ FVP T+G ++AI++TI TG ++TRF+G LF I Sbjct: 7 FSALDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFI 66 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NW +SN+VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 67 NFAVGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKI 126 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + L W+VA G+ +SA WI+ AN WMQ+P G F+I R MT +V NP Sbjct: 127 PAWLSLASIWIVALGTTVSAFWIIIANAWMQHPVG--FEIKNGRAVMTDAWAIVTNPKGL 184 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H GA F++A+SA++L R SF + + + G + G + Sbjct: 185 EWFAHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQ 244 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPA-PFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K AA W+T P +VA P N F + +P L LA ++ Sbjct: 245 GQSAVRDQPMKYAAFSALWETPAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNF 304 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 GL L AE R GN P V + Sbjct: 305 TGKAKGLNELQAEYEAR-------------YGPGNYIPFVWPVYWAF------------- 338 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 R+MVG G L+LLV L+ + + +GK+D Sbjct: 339 ------------------------------RVMVGLGFLMLLVALVYVWRWRQGKLDDPG 368 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 + + L P +A GW TE GRQPW +Q +L T A S L + SL+ Sbjct: 369 RLYPLLLAMPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWV 428 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +Y + +V+L+ + AR G E P+ Sbjct: 429 VYLTLIGLDVFLLTRTARAGMHEPDVETPS 458 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 174/512 (33%), Positives = 274/512 (53%), Gaps = 23/512 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D I LSR QFALTA YH++FVP ++G+ F++ ++ T+ +T + + +F+ K GI Sbjct: 1 MDPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F LGV TG+ MEF+FG NWS YS +VG IFG PL +E L AF LESTF+G+ FG RL Sbjct: 61 FFVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + + ++ V GS+LS LWIL AN W Q PTG + I R E+T F VFNP+ Sbjct: 121 PRAITWISSFFVFIGSSLSGLWILIANSWQQTPTG--YIIQNGRAELTDFMGAVFNPLLV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL-QLGDS 240 ++ HT+ + +TGA + A+ A+YLL+ R VA + AIG V ++ + L G + Sbjct: 179 SQYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVVVLAISAVIQLYPTGHA 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 +A+ QP KLAA EG ++TE AP + ++ + A+ IP LL L+ Sbjct: 239 EGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGDW 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + V GL + + + ++ + L+ + Sbjct: 298 NAEVMGLHDAARYVWYEQVLNNPNFASEKDRKE------------------FIETLMKAH 339 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 D N A + + VA +F+++R+M+G G+L +L+ LI ++ L GK+ R Sbjct: 340 GVDPNAPDANEQMVKVLEEALPVAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGKLYDAR 399 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIV 479 W LK+ + ++PLPW+A EAGWF E GR PW + ++ T + S ++ + +LI V Sbjct: 400 WFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLITLIGFV 459 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 +Y++ ++ ++K R GP ++ + + Sbjct: 460 VVYSVLFYIWLHFVRKLIREGPEPVEGDVTAK 491 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 173/509 (33%), Positives = 260/509 (51%), Gaps = 66/509 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 ++ L+R+QFA+T +YHF FVP ++G F++AIME++YV T Y+ M +FWG +F ++F Sbjct: 3 ILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLLSF 62 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TGL EFQFG NWS YS ++GDIFGAPLA+EAL++FF+ESTF+GL+ F W+++ Sbjct: 63 AVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKVKP 122 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL W+ +FGS SALWIL AN +MQ+P G ++I R M +F L+ NP + Sbjct: 123 GLHLFFIWMTSFGSLTSALWILTANSFMQHPVG--YEIKGGRAVMVNFGALLKNPQLWYE 180 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGR-----ERNVALRSFAIGSVFGTLAIIGTLQLG 238 F H ++ + G + I ++A+ LL+ + + +S +G + + IG + LG Sbjct: 181 FGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIALG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D+ + + QP+K AA E + T AP+ +V + + IP L IL+ H Sbjct: 241 DAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILSYH 300 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 V G+ L A+ + YG L Sbjct: 301 KTTGAVTGMNELNAQYKKK-----------------------------------YGKNLD 325 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTL---RGK 415 Y P V +F+SFRIM G+ + LV L+ L+ T + Sbjct: 326 YY--------------------PPVNTLFYSFRIMCAVGAWIFLVSLVGLIMTREKSKKP 365 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFS 474 + Q RW L + LP+I AGWF+TEFGR PW + + + S ++ G L S Sbjct: 366 LAQRRWALWCIAITTFLPFIGNTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLLTS 425 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 I+ L+T I ++L+ R PS Sbjct: 426 NIVYFVLFTTLAITLIWLIVLELRKDPSE 454 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 183/503 (36%), Positives = 268/503 (53%), Gaps = 62/503 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGK--TIYRDMTRFWGKLF 59 DV++LSR+QFA T+++HF FV LT+GL FL+A+MET V +Y MT F+G LF Sbjct: 1 MDVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLF 60 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 INFA+GV TG+ EFQFG NWS YS +VG+IFG PLA+E LMAFFLESTF+GL++FG Sbjct: 61 LINFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKD 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 RL + L WLVA G+ +SA WI+ AN WM +P G +++ + +T F +VFN Sbjct: 121 RLKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVG--YEVVDGQARLTDFGAVVFNYK 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + + F H + +V F++ ISA++LLR ++ +V RS IG VF + + ++ G Sbjct: 179 AWLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGH 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + A + QP+K AAME +W+T +PAP+ +VA +Q+ N +L+IP + ILA +S Sbjct: 239 TEAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNS 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 L+ G+ L + + +G+ P V + Sbjct: 299 LEGRYEGINQLEEQYD-------------EAYGEGDYVPPVAWVYWSFR----------- 334 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--ID 417 IMV GSLLL + L R + +D Sbjct: 335 --------------------------------IMVAIGSLLLATAFLGLFLWWRRRQGLD 362 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 RW L+ + +PLPWIA GW +TE GRQP+ + +L SA + G++ L+ Sbjct: 363 GTRWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVG 422 Query: 478 IVGLYTLFLIAEVYLMQKYARLG 500 + +Y + +VYL+ AR G Sbjct: 423 LWVVYLALIGLDVYLLTVTARAG 445 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 161/532 (30%), Positives = 251/532 (47%), Gaps = 76/532 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DVID++RWQF +T +YHF+FVPLT+GL L+A+M+T + VTGK + TRF+G + I Sbjct: 1 MDVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+E L+AFFLES F+GL+ FGW ++ Sbjct: 61 NFAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKI 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H W+VA +N+SA +I+ AN +MQ+P GA ++ +T R E+T L+ NP + Sbjct: 121 PGWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTAL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN---VALRSFAIGSVFGTLAIIGTLQLG 238 F H V +T F++ I W+L+R ++ + + +G +A+I G Sbjct: 181 AAFPHAVAGSLLTAGTFVVGICGWWLIRASKQESHRMFRPALWMGWWTTVIALIAVAVTG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D A + Q QP+K+A+ E TE P + D + +++P +L LA Sbjct: 241 DIQAKLMFQQQPMKMASAESLCHTETDPNFSILTIGTHNDCDSVIHLIEMPWVLPFLAEG 300 Query: 299 SLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + G+++L A+ GN P++ + Sbjct: 301 RFTGVTLEGVQDLQAK-------------AESLYGPGNYAPNLFVTYW------------ 335 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 SFR M+G L + I+ + +G+ Sbjct: 336 -------------------------------SFRAMIGLMVGSLAIAFISWLLLRKGRTP 364 Query: 418 Q---HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI-------------LPTYS 461 RW +L +P+P++A AGW TE GRQPW + + Sbjct: 365 TGRIARWFAWGSLAVIPMPFLANSAGWIFTEMGRQPWVVHPNPESVGDPRTEMIRMTVDM 424 Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 S + +LI LY + + +L+++ +GP Q Sbjct: 425 GVSDHAPWVVWVTLIGFTLLYFILFVIWFWLIRRAVLIGPPHESGPVGDASQ 476 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 168/509 (33%), Positives = 243/509 (47%), Gaps = 71/509 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + + + LSR QFA+TA++H L+ LT G+ L I+E +++ T Y RFW +L+ Sbjct: 5 LSNTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYV 64 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NF +GVATGL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R Sbjct: 65 LNFGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDR 124 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + H L T LVA G+NLS WIL+AN W+Q P G F + + + + NP Sbjct: 125 VPPLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIF--VDGKFVVQDYFAAIANPFM 182 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F+H A T I ISAW +L GR+ RS + V + +G Sbjct: 183 VNSFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHL 242 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 SA +V+ QP KLAAME W+T PA PA + VVA P E+N + L Sbjct: 243 SAEQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWEL------------ 290 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 +PG + + E P+L + Sbjct: 291 ----SIPGALSYILELKPQLDKPIQGLK-------------------------------- 314 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI-- 416 A V +++SFRIMV G +M + ++Q LRGK+ Sbjct: 315 --------------DWAPVDRPRMVGLIYYSFRIMVAIGLFFAALMAVTVLQWLRGKLKP 360 Query: 417 ---DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 Q +W+L+ +++ PL ++A+E GW + GRQPW + + T + S L G++ F Sbjct: 361 EIISQQKWLLRAWVFAAPLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEILF 420 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 SL + +Y +FLIA +Y + R GP Sbjct: 421 SLTGLSVMYIVFLIATLYFGSRIIRNGPD 449 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 211/416 (50%), Positives = 302/416 (72%) Query: 98 MEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA 157 +E LMAFFLESTFVGLFFFGW+RL+K +HLL T+ VAFGSN SALWIL ANGWMQ P + Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 HFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVAL 217 F+ +T+RME++SFSELV NPV+Q KF+H YV GA+F++ IS++Y+L+GR+ A Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQ 277 RSF++G+ FG +AII L +GD S YE+ + QP KLAAMEGE++T+PAPA ++ P Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 DQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNRE 337 + +N F++ IP GI+AT SLDK + GLK++ R++ G +A+ L++++ GN Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 PHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG 397 +AF+ ++ DLG+G+LL +Y P++ T Q Q A IP V P FW+FR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 SLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 L+L+++ A +Q +RGK++ R++L+ L+ LPLPWIAIE+GWF+ E+GRQPWAI ++L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 P ++SALTTG L F++ ++ GLYTLFL+ E+YLM KY RLGPSA+++ + +Q Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQ 416 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 145/512 (28%), Positives = 229/512 (44%), Gaps = 68/512 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+R QFA T +H +F L++GL +A++E ++ TGK Y+ + FW K+F + Sbjct: 152 FSALDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAV 211 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M +QFGTNWS +S++ G + G L E + AFFLE+ F+G+ FGW R+ Sbjct: 212 AFGMGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRV 271 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H T +VA G+ +S WIL +N WMQ P G F+I ++ T + ++FNP Sbjct: 272 SPRAHFGATLMVAIGTLISTFWILASNSWMQTPQG--FEIVDGQVVPTDWFAIIFNPSFP 329 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H +A +V A+ + A +AW+LL+GR + F++ + +GD Sbjct: 330 YRLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQH 389 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAA+EG W+TEP ++ P+ + +A+ IP L ++ THS D Sbjct: 390 GINTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYAVSIPHLGSLILTHSWD 449 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GLK+ + P ++ +M + L G L Sbjct: 450 GEIRGLKSFPPQDRPNSTVVFWSFRIMVGLGLAMIGLAALAWLLRRRGRLYEAK------ 503 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R + G + +L Sbjct: 504 --------------------------WFHRFALAMGPTGFVSLLAGW------------- 524 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 TE GRQPW + ++ T A S L+T Q++ SL+ V + Sbjct: 525 --------------------VTTEVGRQPWVVYGVMRTSHAVSPLSTQQVSVSLMTFVVV 564 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 Y L VY M K R GP A+ + P Sbjct: 565 YFLVFGTGVYYMLKLMRKGP-ALPGDTPDDAH 595 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 171/499 (34%), Positives = 253/499 (50%), Gaps = 66/499 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR QF TA+ H++F+PLT+GL +A ME Y T +Y M RFW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA E + AFFLESTF+GL FG + Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +++ +VA G++LS WI+ AN W Q P G + + R EM SF+E++FNP + Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 V+++H + ++T AMFI+AISA+++++ + +A RS +G V G + + G S Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 A V + T+P + W + P LL + H Sbjct: 241 HAQLVGE--------------TQPEKLAAYEAHWETEANA--------PLLLFAIPDHEN 278 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 ++ ++G +LS Sbjct: 279 ER--------------------------------------------NRFEIGIPGMLSFL 294 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 D + + P V F +FR+MV G +L+ ++ Q +G + + Sbjct: 295 TYDDVNAEVTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKE 354 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 ++K A W LPLP+IA AGW + E+GRQPWA+ +L T A S LT ++ SL + + Sbjct: 355 KLMKTAFWMLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIA 414 Query: 481 LYTLFLIAEVYLMQKYARL 499 +Y+ + VYLM+K R Sbjct: 415 IYSFLVWLMVYLMKKEVRK 433 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 177/552 (32%), Positives = 269/552 (48%), Gaps = 70/552 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + D +DL+RWQF +T +YHF+ VP T+G+ L+A+MET++ TGK + TRF+GKLF Sbjct: 8 LLDSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFL 67 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NFALGVATG+ EFQFG WS YS +VGDIFGAPLA EAL++FF+ESTF+G++ FGW + Sbjct: 68 VNFALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGK 127 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTS---FSELVFN 177 ++K H++V WLV G N S LWI+ AN WMQ P GA F+ +T R E+ F +V N Sbjct: 128 ISKKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTN 187 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG---------RERNVALRSFAIGSVFGT 228 + +H V + + A + IS W+++R R V G Sbjct: 188 STMWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIML 247 Query: 229 LAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAP--------APFHVVAWPEQDQE 280 A + T+ G + QP K+AA EG E P V+ + Sbjct: 248 AAGLLTVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGENS 307 Query: 281 RNAFALK------IPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG 334 + + + IP LLG +A +S + + G+ + T L+ + + + Sbjct: 308 GSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF----KDKAP 363 Query: 335 NREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMV 394 N + RG GY + P V PVFWSFR+M+ Sbjct: 364 NIDTTNTSGLRGKGDVAGY---------------------SWAKYAPSVLPVFWSFRLMM 402 Query: 395 GCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ 454 G G + + ++ L QT G++ R + +AL +LP+P++ + GW MTE GRQP+ + Sbjct: 403 GVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFIVY 462 Query: 455 D-------------------ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 +L ++ + SL++ LY + I L+ + Sbjct: 463 PNQDAFNADMTVQNAGAGVYMLTGDGLSGVVSPVEFLISLVVFTLLYLVLGIIWFKLLVR 522 Query: 496 YARLGPSAMQSE 507 Y++ G + S+ Sbjct: 523 YSKEGINTPASD 534 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 154/509 (30%), Positives = 233/509 (45%), Gaps = 68/509 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +DL+R QFA T +H +F +T+GL L ++E +++ TG+ +Y+D+ +W K+FG+ Sbjct: 4 ISALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKIFGV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGWSRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 HL T +VA G+ +SA WIL +N WMQ P G F+I + + ++FNP Sbjct: 124 GPGLHLFSTAMVALGTLISATWILASNSWMQTPQG--FEILDGVVVPVDWWAIIFNPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH +A ++ A+ + A AW++L+G++ ++ + +GD Sbjct: 182 YRLVHMGIAAFLATALIVGAAGAWHILKGQKTEATRTMLSMAMWMLVVVAPLQAVVGDLH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAAMEG W+ P + P+ + E FA+ IP L ++ THS D Sbjct: 242 GLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTHSWD 301 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 VP LK+ E P F +G GML+ Sbjct: 302 GQVPALKDFPPEDRPNAS----------------------IIFWSFRVMVGLGMLM---- 335 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 + G L + + + +G Sbjct: 336 --------------------------------IALGLWSLCLRYRGSLYSHQG------- 356 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 L+M LW P IAI AGWF TE GRQPW + I+ T A S LA SL + + + Sbjct: 357 FLRMTLWMGPAGVIAILAGWFTTEIGRQPWVVYGIMRTADAVSNHDISSLAASLALFIIV 416 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 Y + + RL P ++ +P Sbjct: 417 YFFVFGIGISYLMHLMRL-PVQHRAPEPE 444 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 410 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 173/542 (31%), Positives = 260/542 (47%), Gaps = 70/542 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+D++RWQF +T +YHFL VPLT+GL L+A+M T++V TGK + MTRFWG+++ I Sbjct: 6 IDVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLI 65 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF LGVATGL EFQFG WS YS +VGD+FG+ LA+EAL+AFFLESTF+GL+ FGW R+ Sbjct: 66 NFVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRI 125 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL W GS +SA +I+ AN WMQ+P G D T R F ++ N + Sbjct: 126 PKELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTAL 185 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR---------ERNVALRSFAIGSVFGTLAII 232 F H V+A + ++ I W+L R + V RS +G A + Sbjct: 186 AAFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFV 245 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE--QDQERNAFALKIPA 290 GD + + QP+K+++ E +TE APAPF V+AW + ++ + ++ IP Sbjct: 246 LVALTGDWQGKLMYEQQPLKMSSAEALCETE-APAPFSVLAWSKLGSNECDDVHSITIPG 304 Query: 291 LLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGD 350 L+ LA VPG+ L E Sbjct: 305 LVSFLAHGDFSSAVPGVNQLQEEY------------------------------------ 328 Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ 410 + Y D + P +A +WSFR+M+G G++ V AL Sbjct: 329 --AAVYGETYPDDPSRF--GALAGEEIDYTPLLAVSYWSFRLMIGMGAVSAGVAAYALWA 384 Query: 411 TLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD-----------ILPT 459 T +G++ + + +L ++ P++A GW TE GRQP+ + Sbjct: 385 TRKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQTYFFTA 444 Query: 460 YSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG-------PSAMQSEQPTQQ 512 + +T ++ SL ++ +Y + E++L+ ++ R G P T Sbjct: 445 QAVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRGVTTGDHAPDHPAPAPGTPA 504 Query: 513 QG 514 +G Sbjct: 505 EG 506 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 184/504 (36%), Positives = 266/504 (52%), Gaps = 65/504 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGK 57 D + LSRWQFA+T +YHFLFVP+TLGL +A++ET YV T + ++ + RF+G Sbjct: 1 MDALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 LF INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+EAL AFFLESTF+G++ FG Sbjct: 61 LFVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W +L++ H L W+VAF SNLSA WIL AN +MQ+P G F + R EMT F LV N Sbjct: 121 WDKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVG--FAVRNGRAEMTDFFALVTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQ 236 P ++ HT+ + T ++A+SAW +L R ++ G+VF + T+ Sbjct: 179 PYVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMG 238 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 G A +AQV P+KL+++E W+TE PAPF +VA ++D +N F L +P + Sbjct: 239 SGHLQAQYIAQVNPMKLSSVEALWETE-DPAPFAIVADIDEDMHKNNFELTVPGAFSFML 297 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 ++ VPG+ + + Sbjct: 298 YNTPTGAVPGINQIQKDYSE---------------------------------------- 317 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 +Y PD P V +FWSFRIM+G G L++L+ L A + Sbjct: 318 --KYGPD--------------EYRPDVTGLFWSFRIMIGLGGLMILLGLAAAYFGFTNRP 361 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSL 475 LK+ W LPLP++A GW++ E GRQPW + + T A S LT + ++ Sbjct: 362 LACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVWLTM 421 Query: 476 IMIVGLYTLFLIAEVYLMQKYARL 499 LY + IA +++ ++ + Sbjct: 422 AGFTVLYLVLAIAALWIAMRFIKK 445 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 407 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 170/510 (33%), Positives = 260/510 (50%), Gaps = 68/510 (13%) Query: 7 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALG 66 L+R+QFA+T ++HF FVP T+G F++AIMET+YVVT Y+ MT+FWG + ++FA+G Sbjct: 6 LARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLLSFAVG 65 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ--RLNKY 124 V TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTF+GL+ F W +++K Sbjct: 66 VVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNKKISKK 125 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H+ WLV FGS +SA+WIL AN +MQ+P G +++ R +MT F L+ N + +F Sbjct: 126 LHVTFIWLVVFGSLMSAMWILIANSFMQHPVG--YEVVNGRAQMTDFFALINNHQFRYEF 183 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRE-----RNVALRSFAIGSVFGTLAIIGTLQLGD 239 H + G + I +SA+ LL+ E + + +S +G + L I + +GD Sbjct: 184 GHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISVMGVGD 243 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + QP+K AAMEG+++ PA + V+AW + ++ F +KIP +L IL+ Sbjct: 244 LQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSILSYGK 303 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 V G+ E L+ + Q N P V F G Sbjct: 304 PSGSVKGMDTANKE-------------LVAKYGQDNYFPMVNLLFYG------------- 337 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--ID 417 FR M G+++L V + L T K + Sbjct: 338 ------------------------------FRTMAAFGTMMLGVSALGLFLTRPKKPILY 367 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLI 476 H+W+L + + P+++ GW +TE GR PW + + + S ++ L FS Sbjct: 368 DHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVSVASLLFSNT 427 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQS 506 + L++ VYL+ + + GP + Sbjct: 428 VYFLLFSCLGAMMVYLVIRELQKGPEHEEV 457 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 160/509 (31%), Positives = 252/509 (49%), Gaps = 69/509 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M+ V LSR QFA T +H LF ++GL L I E ++++T Y + +FW K+F Sbjct: 1 MYWVEILSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 + F +GV +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R Sbjct: 61 LTFGMGVVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +NKY H L + + G LSA WIL+AN WMQ P G ++ + E+ S+ ++FNP Sbjct: 121 INKYVHFLANFTIFAGVTLSAFWILSANSWMQTPDGVNYI--NGKFEVYSWYHVIFNPSV 178 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 +++H +MA Y++ M I+ +SA+Y+++ + + A V + +G L +GD Sbjct: 179 IPRYIHMLMAAYLSTLMVILGVSAYYIIKDKHHSFAKTCIKFSIVSILILSVGQLAVGDD 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 EV + QP+K AA+EG W T+ APF V A+P + QE+N F+++IP L ++ TH L Sbjct: 239 VGREVHEHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHEL 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D + GLK++ + P V F +G G L+ Sbjct: 298 DGELIGLKSVPEKDRP----------------------VVAVVFYSFRIMVGIGTLMI-- 333 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 +M G++LL R K+ + Sbjct: 334 -------------------------------LMGVVGTILLA----------RKKLQTSK 352 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W L++ + PL ++AI GWF EFGRQPW + +IL T + S + Q+ SL I+ Sbjct: 353 WFLRLCTLTTPLGFVAIITGWFTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIII 412 Query: 481 LYTLFLIAEVY-LMQKYARLGPSAMQSEQ 508 +Y + + + + GPS E+ Sbjct: 413 VYFVIFGFFYFRYLFRIINGGPSTGGEER 441 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 161/520 (30%), Positives = 240/520 (46%), Gaps = 46/520 (8%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+ VPLT+GL L+A+M+T++VVTGK + +T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL WLVA G N SA +I+ AN +MQ+P GA ++ +T R E+TS L+ N + Sbjct: 121 PKLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTAL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H V ++T F+ + W+++R + + + + Sbjct: 181 AAFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKH------------EET 228 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A + + P ++A A+ L Sbjct: 229 ARTMFR--------------------PVTILALWVMVASGIGLAIT------GDIQGKLM 262 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +K AE+ + G +L L GL L G S Sbjct: 263 FEQQPMKMASAESLCHTETGADFSILTVGTQNNCESITQLIKIPGLTSFLADGTFDSTVE 322 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 + P + +W+FR M+G + L+ ++ L T G++ +W Sbjct: 323 GVTEIQARYEEMYGPGNYKPNLFVTYWTFRAMIGWAAGSALLAVVGLWMTRGGRVPDKKW 382 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI--------LPTYSAHSALTTGQLAF 473 +++ +P P++ AGW TE GRQPW + L S + + Sbjct: 383 FGWLSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPNPTGVDMIRLTVDQGVSNHSPWTVWV 442 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 SLI +Y + L+++Y GP + P Sbjct: 443 SLITFTVVYGALAVVWFTLIRRYTVEGPLEHDAHPPGDDH 482 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 187/515 (36%), Positives = 265/515 (51%), Gaps = 69/515 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R QFA TA YHF+FVPLT+GL +LAI ET Y + T+FW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA EAL+AFFLESTF+G+ FG +R++ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 +++ WLV FGS LSALWIL AN WMQ P GA D + +T F NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 ++ HT++A + GA MA+SAWYL++ R + A+++ +G+V G + L SSA Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 VA+ QP KLA MEG + +E P + W +++ ++ IP LAT + D Sbjct: 246 VTVAEEQPTKLAMMEGMYDSE--VPPLYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 GL L A YG L AP Sbjct: 304 EYEGLNQLAASAE-------------------------------------YGALDPETAP 326 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR-GKIDQHRW 421 V VF ++ +MV L++L +++ALV TLR GKI +W Sbjct: 327 --------------------VNFVFQTYHLMVAMYGLIMLTVILALVFTLRGGKIQNMKW 366 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD---------ILPTYSAHSALTTGQLA 472 + ++ L S P IAI+AGWF E GRQPW + +L +++ +L Sbjct: 367 LQRLVLISPVFPLIAIQAGWFTAEVGRQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELV 426 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSE 507 ++++ + +Y ++A M ++ + GP A Sbjct: 427 ITMVLFLVVYAFLMVAWARTMGRFIKEGPVAEHEP 461 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 235/514 (45%), Gaps = 64/514 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFALT +H F L++GL L I+E +++ TG Y RFW F IN Sbjct: 6 DPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G+ TG+ +EFQFGTNW +S +G+ FG L E MAF LE+ F + FGW+R+ Sbjct: 66 FAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKRVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H T +VAF ++LSA WIL AN WMQ PTG H + + + +F+P Sbjct: 126 PKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGGHIE--NGVFIVDDYLAAIFSPDLPF 183 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 F+H +A + A+S +++ G+ L+SF I ++ + +GD + Sbjct: 184 AFLHMHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGDQNG 243 Query: 243 YEVAQVQPVKLAAMEGEWQTEP--APAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 E+A++QP K+A +E W+T P A +++VAWP+ + ERN+F+++IP +L +L THS Sbjct: 244 LEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVTHSP 303 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 VPGLK E P + ++ M I + + +G L R Sbjct: 304 TGTVPGLKEFPKEDRPPIIIPFYSFRFMVGIGFAMVGVALWTVWEWRKGGLRPENAPGRV 363 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 W FR + L Sbjct: 364 ---------------------------WLFRA----WGAMAL------------------ 374 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 ++A+ GW E GRQPW + ++ T HS LT GQL SL V Sbjct: 375 -----------GGYLAVILGWITREVGRQPWMLYGLIRTADGHSNLTVGQLWTSLAGFVV 423 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 YT+ V M K + GP + P +G Sbjct: 424 AYTILGCVFVIFMAKLFKKGPDMEELPPPGHARG 457 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 157/540 (29%), Positives = 249/540 (46%), Gaps = 39/540 (7%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSRWQF +T +YHF+FVPLT+GL L+A+M+T + VT K + TRF+G + + Sbjct: 16 LDTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLV 75 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ EFQFG NWS YS VGD+FG PLA+E L+AFF+ES F+G++ FGW R+ Sbjct: 76 NFAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRI 135 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H L W VA NLSA +I+ AN +MQ+P GA F+ +T R E+T L+ NP + Sbjct: 136 PTWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTAL 195 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H V ++T F++ +S W+L++ A + D++ Sbjct: 196 AAFPHAVAGSFLTAGTFVLGVSGWWLIKDARAK-AKTATTTQDGLAL----------DNA 244 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQE-------RNAFALKIPALLGI 294 A AA + AP+ + A + D+ + I + +G+ Sbjct: 245 PAAEASASGTNTAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGV 304 Query: 295 LATHSLDKPV----PGLKNLMAETYPRLQRGR-MAWLLMQEISQGNREPHVLQAFRGLEG 349 T + + +K AE+ + + L + + HVL+A L Sbjct: 305 FITGDIQAKLMFVQQPMKMASAESLCHTETDPSFSILTIGTHNNCESVIHVLKAPFVLPF 364 Query: 350 DLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALV 409 M+ A+ P + +WSFR M+G L + A + Sbjct: 365 LAEGKFSGVTLQGVMDLQEKAEALYGPGNYSPNLFVTYWSFRAMIGLMVGSLALAFFAWL 424 Query: 410 QTLRGKIDQHRW---VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI---------- 456 T +G++ + +W L ++P P++A +GW TE GRQPW I Sbjct: 425 FTRKGRLPKGKWATIFSWGCLAAIPFPFLANSSGWIFTEMGRQPWVIHPNPESVGDPRTE 484 Query: 457 ---LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + S + +L+ +Y + + +L+++ GP A + + Sbjct: 485 SIRMLVDHGGSGHEPWVVIVTLVGFTLIYGILAVVWFWLIRRVVLDGPPAESGPEAVASE 544 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 152/521 (29%), Positives = 235/521 (45%), Gaps = 70/521 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + SR QFALT + H +F +++GL L + + +Y + RFW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+E +MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLR--MEMTSFSELVFNP 178 ++ + L + V G+ LSA+WIL AN WMQ P G ++ + + + NP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-------ERNVALRSFAIGSVFGTLAI 231 FVH A + A+ + I+A+Y+ R ++ I V + Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 232 IGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPAL 291 GD A + + QP K AAME W+T+ P ++VA+P Q+ L Sbjct: 241 PLQAIHGDLYARHIVETQPQKFAAMEAIWETDSY-VPEYIVAFPTSIQD----------L 289 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 L + A +PG + +A G +Q EG Sbjct: 290 LDLRAKEIFGFGIPGGASWLA--------------------SGGDPQATIQGLNEFEG-- 327 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 P VA VFWSFRIMV G +L+ + + Sbjct: 328 ---------------------------PQPPVAIVFWSFRIMVALGFWFILLAFWGVYRW 360 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQ 470 RG++ + + K + S PL +A+E GW +TE GRQPW IQ ++ T + S LT + Sbjct: 361 WRGELYEDDLLHKALMLSAPLGLVAVELGWIVTEVGRQPWVIQGVMKTSDSVSPGLTGAE 420 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 +L+ +Y L Y++ + R GP T+ Sbjct: 421 ATATLVGFAIVYLCLLTLYTYVIVRIIRAGPPDGDELTTTE 461 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 142/500 (28%), Positives = 231/500 (46%), Gaps = 69/500 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA +H +F T+GL +A ET++ T I++ +++FW ++F + Sbjct: 3 LDPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAV 62 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M FQFGTNWS +S + G L+ E + AFFLE+ F+G+ FG ++ Sbjct: 63 VFGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKV 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL +VA G+ +S+ WIL AN MQ P G ++ +TS+++ +F P Sbjct: 123 PQGVHLFAAIMVATGTFISSFWILAANSLMQTPQG--LELINGMYYVTSWADSLFTPSFG 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F H +A ++T ++ + +SAW++L+ RE ++ +I F + +GD Sbjct: 181 YRFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWFLLVLAPLQAVVGDFH 240 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP+K+AAMEG W+T + P + A P+++ ++N F + IP L + TH D Sbjct: 241 GLNTLKHQPMKVAAMEGNWET-SSQVPLLLFAIPDKESQKNHFEVAIPGLASYVLTHDWD 299 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 VPGL + E P V F +G G+L Sbjct: 300 GVVPGLNEVPIEEQPP----------------------VFIVFWSFRIMVGLGLL----- 332 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 M+ G + LV +G+I + Sbjct: 333 -------------------------------MIAFG-------VWGLVLRRKGRIYHNNI 354 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP-TYSAHSALTTGQLAFSLIMIVG 480 L + P+IA+ AGW +TE GR PW I + +LT G F+LI + Sbjct: 355 FLNGLRFMSLSPFIAVLAGWVVTETGRAPWLIYGQMTHAQGLTPSLTGGMALFTLIGYIV 414 Query: 481 LYTLFLIAEVYLMQKYARLG 500 +Y+ A VY + + + G Sbjct: 415 VYSCVFSAGVYYLLQVFKGG 434 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 164/523 (31%), Positives = 271/523 (51%), Gaps = 21/523 (4%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKL-FGINFA 64 D +R +FAL+ + H +FVPL +GL+ + AI ET+YV Y+ +F GKL I F Sbjct: 8 DSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIVFV 67 Query: 65 LGVATGLT--------MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFF 116 L + TG+ + N S +S YVG L L T V LF+ Sbjct: 68 L-IITGILTPPMPEDWQQLDIFIN-SVFSEYVG-----LLGTIVSTGMMLWLTAVSLFYV 120 Query: 117 GWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT-GAHFDIDTLRMEMTSFSELV 175 GW+ L HL +TWL+ F + L ++ NGWM P+ FDI+T+ + +S E+V Sbjct: 121 GWRYLPAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIV 180 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 P++ +F H ++ G + ++++S +YL + R++ A IG+ G + + Sbjct: 181 STPMASTRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAI 240 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 GD +V Q QP+KLA +E W+T+ A + A P+Q E N F +KIP +LG + Sbjct: 241 FSGDIHGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWM 300 Query: 296 ATHSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYG 354 + + D PV G+K L AE R++ G +A + S + + + + + DLGY Sbjct: 301 LSGTDDTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYA 360 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 L+ +Y PD+ VT Q + A + V +F+SFR+MVG G +LL+ + ++G Sbjct: 361 ELVRKYNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKG 420 Query: 415 KIDQ-HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL-A 472 +++ +LK++ ++LP+P+IA +GW ++E+GRQPW I ++PT + TGQ Sbjct: 421 RVNSVSTRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQTNG 480 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGPS-AMQSEQPTQQQG 514 F L ++ Y + ++ ++ + GP A+ E+ Q G Sbjct: 481 FQLPTLLMSYAALFLILGVILARWIKQGPKPAISVEKVCLQAG 523 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 163/526 (30%), Positives = 241/526 (45%), Gaps = 81/526 (15%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFA T ++H+LF PLT+GL +L +E +++ T IY RFW K+FG+ Sbjct: 1 MDVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ L FGW R+ Sbjct: 61 NFALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT------LRMEMTSFSELV 175 H T +VA G S++WI AN W Q P G LR E+ F +V Sbjct: 121 GPKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMV 180 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 FNP + + +H + +V GA F+M+ISAWYLL+ R A +SF +F T++ L Sbjct: 181 FNPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQL 240 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 G A VA QP KLAAMEG + T+ AP ++ WP+ ++ + + IP +L ++ Sbjct: 241 ASGHFQAEGVAHHQPAKLAAMEGLYTTQKQ-APVYLFGWPDSQTKQVKYGIPIPGMLSLM 299 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 T ++ V GL L P V F+ + GM Sbjct: 300 VTGDSNQEVRGLDQLDPIW---------------------GTPPVWITFQAYHIMIAIGM 338 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 + V+ + F ++ + R Sbjct: 339 IFI------------------------VSCTYSCF------------LLYRGTLYETRWV 362 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ----------DILPTYSAHSA 465 + H + L +A + + W++ E GRQPW + + + + A Sbjct: 363 LWYHVFALGLAFLANEMGWVS-------AEVGRQPWIVYPTLVDGLPTGGLRTSAALSEA 415 Query: 466 LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 + Q+ S+I +Y L + + L+ + GP E Sbjct: 416 VIAEQVLGSIIFFAIVYGLLFVLWITLLHQKISHGPDDHAKESGEH 461 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 152/517 (29%), Positives = 246/517 (47%), Gaps = 70/517 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ L+R QFALT ++H+++ L++GL ++ I+E +Y+ T IY M +FW K+F + Sbjct: 1 MDVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ + FGW R+ Sbjct: 61 TFAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 + H T +V G++ SA+WI+ AN WMQ P G + + R E+T F E+VFNP Sbjct: 121 SPKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S ++ H ++ ++ GA +++ISA+YLL+ + + A +S IG + I GD Sbjct: 181 SMIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SS VA+ QP KLAAME +QTE P + ++++ +A++IP LL L+ Sbjct: 241 SSGKVVAKYQPTKLAAMEALYQTESG-VPLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGD 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + + GL + E +P + P + +R + LS Sbjct: 300 FNAEMKGLDQVNPEDWPNV-------------------PVIFNVYRLMIAMWALMFSLSI 340 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 + + + + + W +MV + G+ Sbjct: 341 AGLYLWY----------KKTLENHRGILW---LMVFSAIYAQVANQAGWYSAETGRYP-- 385 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMI 478 W + +L S ++ Q+ S+IM Sbjct: 386 ---------------------WLV----------YGLLRISEGLSKSVKANQVLGSIIMF 414 Query: 479 VGLYTLFLIAEVYLMQKYARLGP-SAMQSEQPTQQQG 514 + +Y L I VY++ + + GP ++ + T G Sbjct: 415 MCVYLLLFILFVYMLNEKVKHGPEEEIEDDSSTPYHG 451 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 131/502 (26%), Positives = 222/502 (44%), Gaps = 66/502 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + L+R QFA T +H +F ++GL LA++ +++ T Y + +W K+F + Sbjct: 43 FSAETLARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKKIFAV 102 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M +QFGTNWS +S+ G + G +A E L AFFLE+ F+G+ FG +R+ Sbjct: 103 AFGMGVVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFGRERV 162 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+ T +VAFG+ +SA WIL+ N WMQ P G + + + ++VFNP Sbjct: 163 GEKLHMFATAMVAFGTLMSATWILSVNSWMQTPAGFSI-AENGQFIPEDWWQIVFNPSFP 221 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH V+A ++T ++ + A+ A +LLR R A R F++ + + GD Sbjct: 222 YRLVHMVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMAMWMAAIVTPLQIYAGDMH 281 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+ AMEG +++ P AP + Q + + +AL+IP L ++ HSL+ Sbjct: 282 GLNTLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILKHSLN 341 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 P+ GL + + P + ++ +M + LG L +RY Sbjct: 342 APLDGLDTIPDDEEPPVAIVFYSFRVMVGLGFAML-------------GLGLWSLWARYR 388 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 + W R + G + +L + Sbjct: 389 GTL-------------------FTTPWLHRAAILMGPTGFIAVLAGWI------------ 417 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 TE GRQP+ + +L T + + + +A SL+ + + Sbjct: 418 ---------------------TTEVGRQPYTVYGLLRTSDSLAPVAAPAVATSLVAFIIV 456 Query: 482 YTLFLIAEVYLMQKYARLGPSA 503 Y A Y + K P+ Sbjct: 457 YFFVFGAGTYYLLKMMNKRPAT 478 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 167/505 (33%), Positives = 248/505 (49%), Gaps = 65/505 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +DL+R QFA T++YHF FVP+T+G+ L+A++ T + G + + RF+G L I Sbjct: 1 MDQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + ++GV TGL EFQFG NWS YS +VGD+FGAPLAME L AFFLESTF+GL+ FG+ L Sbjct: 61 SISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HLL W+VA G+ LSAL+I+ AN WMQ P G + DT R ++TS ++ NPV Sbjct: 121 PRRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFI 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSF----AIGSVFGTLAIIGTLQL 237 ++H ++ + G ++A+SAW L R + + F +G + + + Sbjct: 181 WGYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHV 240 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQT--EPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 G QP+K+AA E WQT + + + W D ++IP LL +L Sbjct: 241 GGQLGINETSYQPMKIAAAEANWQTCQPCSFSMLQIGGWTADDPPTKI--IEIPHLLSLL 298 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 AT + + V GL L + Q+ G P+V + Sbjct: 299 ATGTWNGEVQGLTPLNEQYQ-------------QQYGPGEYVPNVFIQYW---------- 335 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 S R+M +L+ L + + R K Sbjct: 336 ---------------------------------SMRVMAYLATLVALFGVWGIWLWWRKK 362 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSAL-TTGQLAFS 474 + R L +A W + P++ AGWF+TE GRQPW +Q ++ T S + GQ+ S Sbjct: 363 LATARVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVS 422 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARL 499 L ++V LYT + LM ++AR Sbjct: 423 LSIVVVLYTTIGVIAAILMLRHARQ 447 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 156/523 (29%), Positives = 244/523 (46%), Gaps = 74/523 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +L+RWQF +T +YHF VPLT+GL L+A+M+T +G ++ T F+GK+ I Sbjct: 1 MEAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +VGDIFGAPLA EAL+AFFLESTF+GL+ FG RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMT---SFSELVFNP 178 + H + WL+A G+ LS +IL AN +MQ PTGA + T R+E+ F ++F+ Sbjct: 121 SPRLHNMCIWLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFSE 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE--------RNVALRSFAIGSVFGTLA 230 S F HT+ A ++ + + W++ R R R + +G V ++ Sbjct: 181 TSLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLVS 240 Query: 231 IIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIP- 289 + G V +QP K AAM G ++ + V+A D + L P Sbjct: 241 SCIAIGSGHFMGQHVKDIQPAKAAAMMGVCES--GESHDLVIAMWTSDCDGPQLTLPFPG 298 Query: 290 ALLGILATHSLDKP---VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 L +AT+ + GL ++ AE + + + P++ AF Sbjct: 299 GLESFMATNHFSGKESFLKGLDDVNAELKAKYADVYGSDQ--------DYRPNLTVAFWS 350 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 +G G L L + + Sbjct: 351 FRAM-------------------------------------------MGIGFLGLAMSIF 367 Query: 407 ALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD------ILPTY 460 L KI++ + ++ L ++PLP++ GW +TE GRQPW + ++ Sbjct: 368 GLYSLRGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQ 427 Query: 461 SAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 ++++ G + S+ + LY+ + + L+++YA G Sbjct: 428 GLSNSVSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEGIDT 470 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 148/506 (29%), Positives = 228/506 (45%), Gaps = 70/506 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFAL +H LF +T+ L ++L + + ++ I+ RFW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG R++ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H T +VA G+ LSA WIL N WM P G F++ TS+ +++FNP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTPAG--FEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H ++A +T + + +SA+ +L+G + + V + + +GD Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGDTKRAPKLALHTAIVLAGILAPLQIFVGDLHG 262 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 + QP K++A+EG W TE AP + A P + +RN +A+ IP L ++ TH Sbjct: 263 LNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTHDAQG 321 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + GL GN P V F + GML+ Sbjct: 322 EIKGLDTF----------------------DGNHPP-VAPVFWSFRIMVATGMLM----- 353 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + + A + P++ + MVG Sbjct: 354 -LASAWLGCFYLARKKPFPRL-----YLKAMVGL-------------------------- 381 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 W+A AGW++TE GRQPW + IL T A + L G + FSL + Y Sbjct: 382 -------TFSGWVATLAGWYVTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVYAVTY 434 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQ 508 + L+A ++ ++ A + + E Sbjct: 435 AVLLLAYIHTLKVMANKAVNVEEFET 460 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 149/509 (29%), Positives = 235/509 (46%), Gaps = 68/509 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + IDL+R QFA T +H LF +T+GL LA++E +++ T +YRD+ FW K+F + Sbjct: 4 LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GV +GL M +QFGTNWS +S++ G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H T +VA G+ +S WIL++N WMQ P G F+I R+ T + +VFNP Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQG--FEIIDGRVIPTDWFAVVFNPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H +A +V A F+ + +AW+LLRGR+ + ++ L +GD Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQT-EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP K+AA+EG W+ P P + P+ +ER +A++IP L ++ THSL Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSL 301 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 DK VP LK E P ++ +M + +L F GL Sbjct: 302 DKQVPALKEFKPEDRPNSTIVFWSFRVMVALG-------MLMIFTGLW------------ 342 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + + + + P + W M G + +L +I + Sbjct: 343 ------SLWLRKRGTLYNSRPFLYLALW----MGPSGLIAILAG------WFTTEIGRQP 386 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 WV + ++ T A S + Q++ +L++ V Sbjct: 387 WV------------------------------VYGLMRTADASSGHSVAQMSITLVLFVV 416 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQP 509 +Y + + M + R GP A P Sbjct: 417 VYFVLFGTGLGYMMRLVRKGPKAYVEHVP 445 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 174/530 (32%), Positives = 259/530 (48%), Gaps = 90/530 (16%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +DL+RWQF +T +YHFLFVPLT+GL +A ++T + TGK Y +T+F+GKLF I Sbjct: 1 MDALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL W GSNLSA +IL AN WM++P G +++ + MT ++ N + Sbjct: 121 PKRVHLATIWAAVIGSNLSAYFILAANAWMKHPVG--YEVVDGKARMTDLWAVLTNSSAL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE-------------RNVALRSFAIGSVFGT 228 + H V A +V F++A+ +++LR R ++ V Sbjct: 179 AQVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTA 238 Query: 229 LAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKI 288 +A + GD SA + + QP+KLAA EG + A APF +++ Sbjct: 239 IAGVVVAGSGDMSAKLLYEQQPMKLAAAEGLRH-DTAGAPFS-----------PVPGVEV 286 Query: 289 PALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE 348 P LL LAT+ V G ++L A +E G+ P++ F Sbjct: 287 PMLLSFLATNDPSAVVHGTEDLQARFE-------------KEFGPGDYRPNLPVVFW--- 330 Query: 349 GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIAL 408 SFR+M+ G + + ++ L Sbjct: 331 ----------------------------------------SFRVMITFGMATVALSVLGL 350 Query: 409 VQT------LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD-ILPTYS 461 T R + W+ + + +LPLP IA+ +GW ++E GRQPW +Q +L S Sbjct: 351 WLTRKRRRDPRPPRELPTWLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAAS 410 Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 ++ ++A SL + LY + +AE L+ ++ + GP T Sbjct: 411 VSPGVSLTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPEPAAPGPLTP 460 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 151/505 (29%), Positives = 224/505 (44%), Gaps = 50/505 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA +H LF +T+ L ++L + T + +M RFW K+F + Sbjct: 4 LDTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFAL 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 64 SFAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+L T LVAFG+ +SA WI+ N WM P G F++ T + ++FNP Sbjct: 124 PGWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQG--FEMIDGVAFATDWWAIIFNPSMP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F H +A +T A I +SA+ L G + +G G L I + LGD Sbjct: 182 YRFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVRTALKVGVSIGALLIPVQIFLGDLH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AAMEG W+T P + A P++ N + IP L ++ THS D Sbjct: 242 GLNTKEYQPAKVAAMEGLWETGT-NVPLILFAIPDEAARENHAEIGIPGLASLILTHSWD 300 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GL + +AE L P V F +G GM + Sbjct: 301 GELQGLNDFVAEDGTVLH------------------PPVAPIFYSFRVMVGTGMAMLAL- 341 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 R P W + + L + Sbjct: 342 ----SWFGVFMMWKRRRMHPNPGACHW--------------LAVEGL----------PKI 373 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 L + W+A AGW+ TE GRQPW +Q ++ T A + + +A +L+ + + Sbjct: 374 YLWALVPMAFSGWVATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAGTLVGYLVV 433 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQS 506 Y L L A + ++ AR Sbjct: 434 YGLLLFAYISVIVYLARKAARGEDG 458 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 64/500 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+RWQFA+ ++HF FVP+T+GL L+A++ T+ + + +TRF+ +F I+ Sbjct: 2 ALFLARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISM 61 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ +EFQFG NWS YS +VG+IFGAPLA+E L+AFFLESTF+GL+ FG RL Sbjct: 62 AVGVVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPP 121 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL WLV+ G+ LSA +IL AN WMQ+P G + ++ + +T+F ++ N Sbjct: 122 RVHLATIWLVSIGTLLSAFFILAANAWMQHPVG--YRVENGKAVLTNFWAVLGNSTLWWS 179 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFA----IGSVFGTLAIIGTLQLGD 239 F HTV A TG ++ I+ + R + + +F + + A I T GD Sbjct: 180 FAHTVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTAVSGD 239 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A + QP+K+AA E + T A F ++ + F +++P LL ++AT + Sbjct: 240 GQARLMDTQQPMKMAAAEALYDTTRG-ASFSLLTIGDLSGN-PIFQIRVPGLLSLIATLN 297 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + V G+ + R G+ P + + +G Sbjct: 298 PEGEVLGIHQIQQAEQAR-------------YGSGSYVPVIWLTYWSFRIMVG------- 337 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 G LL+L+ L L + R + Sbjct: 338 ------------------------------------AGILLVLLPLWILWRMRRRTGFEG 361 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 RW+ ++AL + LP +A AGW TE GRQPW + ++ T S S + +A +L V Sbjct: 362 RWLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSFV 421 Query: 480 GLYTLFLIAEVYLMQKYARL 499 +YT+ L+ + AR Sbjct: 422 AVYTILGFIAAVLIARAARR 441 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 173/495 (34%), Positives = 243/495 (49%), Gaps = 70/495 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFALT ++H+LF PLT+GL ++A++ Y+ T +Y FW LF Sbjct: 1 MDVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAA 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA E + AFFLES F+ + FGW R+ Sbjct: 61 NFAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 + H + LVA GS SA+WI+ AN W Q P G + R E+T F + V NP Sbjct: 121 SPRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S V+ +HT+ YV GA F+++ISA+YLLRGR A RSF++ F + + L GD Sbjct: 181 SVVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SA VA+ QP KLAAMEG ++ PA H+ P ++ R A + IP L +L Sbjct: 241 MSARVVAEHQPAKLAAMEGHFE--DGPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRD 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 D P+ GL ++ + P + A+ LM + ++ + +G L Sbjct: 299 PDAPIQGLASVPPDARPPVTVPFHAFHLMVALGTAFIAVTLVGLWLKRKGTL-------- 350 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 FR + V+ Sbjct: 351 ------------------------------FRTRWLLWIFVFAVL--------------- 365 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTY-SAHSALTTGQLAFSLIMI 478 S L WI E G RQPW + ++L T S ++T GQ+ S+I+ Sbjct: 366 -----GTYASNQLGWIVAEVG-------RQPWTVWNLLRTEHSFSPSVTAGQVLQSVILF 413 Query: 479 VGLYTLFLIAEVYLM 493 +Y L+ +Y+M Sbjct: 414 GLVYFGLLLVWLYVM 428 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 161/349 (46%), Positives = 218/349 (62%), Gaps = 4/349 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA+T ++HF+FVPLTLGL ++A MET Y +TG + MTRFWGKLF I Sbjct: 1 MDTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+TMEFQFG NW+ YS YVGDIFGAPLA+EA +AFFLES F+GL+ FGW ++ Sbjct: 61 NFALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ HLL WLVA +NLS L IL AN WMQ P G + + R EMT F ++ NP Sbjct: 121 SQKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +KF H + A Y A F+M ISAW+LLR E + RSF ++FG + +GD S Sbjct: 179 IKFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLS 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF-ALKIPALLGILATHSL 300 + EVA+VQP K AAME W+T+ A +++ P++ ERN+ A IP ++ +LA Sbjct: 239 SVEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPDEKNERNSLEAFSIPNMISLLAFRDA 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEG 349 + V GLK+ E P + +++ +M + ++ +G Sbjct: 298 NAEVTGLKSFPRELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISFKG 346 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 + ++ R P V PVF SFR+MVG G +L LIA++ + +G ++HR L Sbjct: 297 ANAEVTGLKSFPRELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISFKGHPERHRLFLT 356 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVGLYT 483 + ++SLPLP+IA + GW + E GRQPW + +L T A S +++ Q+A SL LY Sbjct: 357 LLVFSLPLPYIANQLGWLVAEMGRQPWIVYGVLKTADAVSTSVSATQVAISLAGFTLLYG 416 Query: 484 LFLIAEVYLMQKYARLGPSAMQS 506 + ++YL+ KYAR GP + S Sbjct: 417 GLGVIDIYLLAKYARKGPDSDGS 439 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 143/519 (27%), Positives = 215/519 (41%), Gaps = 72/519 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 + L+R QF A++H ++ PLT+GL +L ME +V T Y +FW KLF IN Sbjct: 6 NPEFLARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFLIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F +GV +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R+ Sbjct: 66 FGVGVISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGRVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 HL T +VAFGS LSA WI+ AN WMQ P G + + +T++ + VFNP Sbjct: 126 PKMHLFATGMVAFGSTLSAFWIMVANSWMQTPAG--VKLVDGKFAITNWYDAVFNPDLPY 183 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 F H A + + +SA+YLL+ R + +F + + + +GDS+ Sbjct: 184 GFGHMFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVISLFIVAPLQIFIGDSAG 243 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ T+PA W N P L + Sbjct: 244 SSLAE--------------TQPAKLAAIEAHW-----HTNKPGEGAPWALLAIPNQK--- 281 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + + E + + G + L + P Sbjct: 282 --------------------------DQKNDWALEIPDGLSMIVTKTMTGKVVGLDHFKP 315 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK------- 415 D P V F++FR+MV G + + L R + Sbjct: 316 DDQ---------------PPVWIPFYAFRVMVAAGVFVAFMAFWTLWMLWRKRERMTAAR 360 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 I +++W+L+ L ++P + A+EAGW E GRQPW + ++ T S L + +SL Sbjct: 361 ISENKWLLRGWLLAVPAIYAAVEAGWMTREVGRQPWIVYGMMRTSQGVSNLPADTVLWSL 420 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 M + Y + + + R GPS Q G Sbjct: 421 AMYMLFYGVIGVTAFVFAARMIRKGPSFEDPPAAPGQGG 459 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 201/352 (57%), Gaps = 4/352 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + LSR QFA+TA +HFL+ PLT+GL ++ ME YV +G Y MT+FW KLF Sbjct: 3 FDALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAA 62 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA E + AFFLES F+ + FGW R+ Sbjct: 63 TFSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRV 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT--LRMEMTSFSELVFNPV 179 + HL + +V FGS +SA WI+ AN WMQ P H + +R E+ F +VFNP Sbjct: 123 SPKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPS 182 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + +F H ++ ++ G +M+I+A+Y+L+ R A +SF + V ++ I L +G Sbjct: 183 TVSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGH 242 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SA VA+ QP KLAA+EG ++TE AP ++ P ++ E + IP +L L Sbjct: 243 RSAEVVAEYQPSKLAALEGLFKTEDG-APLYLFGHPSEETEETI-GIAIPGMLSFLVHQD 300 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 V GL E P + A+ +M + + F G L Sbjct: 301 FSATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTL 352 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 1/149 (0%) Query: 367 VTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMA 426 T + P V F ++ IMV G + + L L RG + +++++L++ Sbjct: 303 ATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFMLQVF 362 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMIVGLYTLF 485 ++S+ P+IA + GW E GRQPW + ++L T A S +++ ++ SL + LY L Sbjct: 363 IFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAISKSVSGAEVLTSLFLFTLLYFLL 422 Query: 486 LIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 L V++M + + GP + + P G Sbjct: 423 LFVWVFIMDRKIKAGPEDVDGDIPILDAG 451 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 173/456 (37%), Positives = 243/456 (53%), Gaps = 14/456 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFA+TA +HF+F PLT+GL +L+ +M+T Y+ TG+ +Y+ M+RFW K+F I Sbjct: 1 MDVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA EA+ AFFLES F+G+ +G R+ Sbjct: 61 SFVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 +K + + +VA GS LSALWI+ AN W Q P G H I R E+ F + N + Sbjct: 121 SKKVYWFSSLMVAVGSTLSALWIIIANSWQQTPAGYH--IVNGRAELIDFKAALLNASTV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +++HTV +TGA F++AISAWYLLR RE A +S +A + + +G Sbjct: 179 PRYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMH 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +VAQ QP KLAA+EG ++TE A + P++ F L IP L +LAT D Sbjct: 239 AVQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIPKALSLLATGDPD 297 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GLK E P + + + LM + + + +G L L + A Sbjct: 298 GEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRLFLKLA 357 Query: 362 ----PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG----SLLLLVMLIALVQTLR 413 P + AA G P V+ R + G + +L +I V Sbjct: 358 LWSVPLPFIANEVGWIAAEVGRQP--WIVYKLLRTVDGISYTVPAWQILASIILFVLIYS 415 Query: 414 GKIDQHRWVLKMALWSLPLPWI-AIEAGWFMTEFGR 448 ++L+ L + P + A TE GR Sbjct: 416 LLFVVWFYLLRKKLAAGPEAFATANGVAKSGTEVGR 451 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 1/165 (0%) Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ 410 LG LS A +A P V F +F +MV G+L +L + + Sbjct: 282 LGIPKALSLLATGDPDGEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWL 341 Query: 411 TLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTG 469 +G + +R LK+ALWS+PLP+IA E GW E GRQPW + +L T S + Sbjct: 342 MSKGTLQDNRLFLKLALWSVPLPFIANEVGWIAAEVGRQPWIVYKLLRTVDGISYTVPAW 401 Query: 470 QLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 Q+ S+I+ V +Y+L + YL++K GP A + + G Sbjct: 402 QILASIILFVLIYSLLFVVWFYLLRKKLAAGPEAFATANGVAKSG 446 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 158/511 (30%), Positives = 232/511 (45%), Gaps = 64/511 (12%) Query: 1 MWDVI-DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF 59 M D + +LSR QFA+TA++H L+ LT+ L L ++E +++ TG +Y RFW KL Sbjct: 1 MLDHVANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLL 60 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 +NFA+GV +G+ MEFQFGTNW+ +S Y G G L E MAF LE+ FVG+ GW Sbjct: 61 VLNFAVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWG 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 R+ + HL T +VA GS++SA WI+ AN WMQ P G + + ++E+T + +FNP Sbjct: 121 RVPRGVHLFATSMVALGSSISAFWIMVANSWMQTPAG--YAVVNGKIEVTDYLVAIFNPD 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 H +A TG I ISA+ L R R RSF I +A + LGD Sbjct: 179 MVWGVSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIALSVLVVAAPLQIWLGD 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 SS V + QP K AA+EG W T + A + ++AWP+Q +RN ++L++P +L +L T Sbjct: 239 SSGVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDWSLEVPGMLSVLGT 298 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 HSL V GL + E P + P + AFR + G MLL Sbjct: 299 HSLHGQVKGLTDFAREDQPPM------------------IPLLYYAFRAMAGIGLCFMLL 340 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + + A + +A V C L + + + G+ Sbjct: 341 AFWTAYALRKARGSLDALLARRKLLLAW--------VLCIPLPYVAVEAGWIVREVGRQP 392 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 W + +L T A S + ++ S+ M Sbjct: 393 -----------------------WVV----------YGLLRTSQAASTVAPSAVSLSMAM 419 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ 508 Y + L+ L ++ R GP Sbjct: 420 FFAFYAVLLVTFFVLACRWLRKGPDLTSLPP 450 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 360 bits (925), Expect = 6e-98, Method: Composition-based stats. Identities = 147/511 (28%), Positives = 229/511 (44%), Gaps = 69/511 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA T YH L+ T+G+ + + ++ +++ T +Y+ + RFW K+F + Sbjct: 1 MDQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV TG+ + +Q G NWS Y+ D G ME L AFFLE+ F+G+ +G +R+ Sbjct: 61 AFGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H + +VA G+ LSA WI++AN WMQ PT D R T F +VFNP Sbjct: 121 GEKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFTTTAD-GRFVATDFWGVVFNPSMP 179 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR--ERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + H + A ++TG + ++A+++ RGR ++ A ++F+I + + + +GD Sbjct: 180 YRLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGD 239 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + QP+KLAA+E W T P +++AWP++ ERN +AL+IP L ++ THS Sbjct: 240 QHGLNTRKYQPMKLAAIEARWDTARR-VPINLIAWPDEKAERNDYALEIPLLGSLILTHS 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 L+ V GLK + P VL F +G GMLL Sbjct: 299 LNGEVKGLKEVPPSERPP----------------------VLPVFLAFRVMVGCGMLLLL 336 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 A ++ R W +GC L + L V T G+ Sbjct: 337 VAFTGLYLRWRGRLYTTR----------WYQIACMGCVPLGFIATLAGWVVTEVGR---- 382 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 QP+ I T A S + TG +A S+ + Sbjct: 383 -----------------------------QPYVIYGHFRTAEAVSPIATGAVASSMAIAF 413 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 LY L+ + + A GP + P Sbjct: 414 VLYNCLLLGFFWYAGRLAWRGPMSGLPTHPA 444 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 125/505 (24%), Positives = 222/505 (43%), Gaps = 73/505 (14%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R Q A T +H +F + +GL L+ + E + + G ++R + + W K F + FA Sbjct: 22 LLPARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFA 81 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G +G + F+ G W + G + G P +E AFF E FVG++ +GW RL + Sbjct: 82 VGAVSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEG-FAFFTEGIFVGIYLYGWNRLAPF 140 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H L +A +SA +++ N +M P G D D +++ ++ ++ NP + + Sbjct: 141 HHWLCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDADGKLLDVQPWTAML-NPATGAQT 199 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H ++A Y+ + + AW +LRGR R+ +G + G + +G + + Sbjct: 200 THMIVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHV 259 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 VA QP+KLAAMEG+W+TE AP + P+ + + +A+ + Sbjct: 260 VAVTQPIKLAAMEGQWETETY-APLRIGGIPDPETKTTPYAI----------------EI 302 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 PG+ +++A P + Sbjct: 303 PGMLSVLAYDNPAAE--------------------------------------------- 317 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA--LVQTLRGKIDQHRWV 422 A P V +F+IMVG G+LL+ + L + L++ + + RW Sbjct: 318 ----VQGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGKSAWHERRWW 373 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 L L S PL +A+EAGW +TE GRQPW +Q L T A + + F + + +Y Sbjct: 374 LLTLLASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVTQ--APGVWFIFAVTMSIY 431 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSE 507 + + + +++ A+ P ++ Sbjct: 432 LVLTVGCISVLRILAKQ-PMPEDAD 455 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 150/512 (29%), Positives = 232/512 (45%), Gaps = 60/512 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + ++L+R QF T L HF + +++GL+F +A M+T + TG + +TRF+GKL + Sbjct: 1 MNSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+E L AFF+E+ F+GL+ FGW RL Sbjct: 61 SFAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+VA + +SA IL AN WMQ+P G +++ +T ++FN Sbjct: 121 PRRLHLACVWIVAGATVVSAYAILVANSWMQHPVG--YELVDGSARLTDIVPVLFNLTVG 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H V + G + ++AI+A++LLRGR+ + G A + T G Sbjct: 179 LTVAHVVSGALLAGTVVVLAIAAFHLLRGRDSAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTE-PAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K+AA E ++TE PA + + LK+PA L ++ S Sbjct: 239 GMLAMKQQPMKMAAAEALYETEKPAGLSLFALGGLSTNPGELIVDLKVPAALSLINQLST 298 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V G+ +L E R G+ P V + Sbjct: 299 QSTVRGINDLQTEAEQR-------------YGPGDYVPVVGLMYWSF------------- 332 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 R MVG G+ L+ +M + +R ++ R Sbjct: 333 ------------------------------RTMVGGGTALIAIMALGCWLAVRDRLAGSR 362 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTY-SAHSALTTGQLAFSLIMIV 479 L++AL + LP++A GW + E GRQPW I +L T + + + SL Sbjct: 363 RFLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANSPNVGAWTVGLSLAGFA 422 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 Y + R G A + + Sbjct: 423 VFYGAVFFFAGRVAAHEVREGLEAPADGRASD 454 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 159/528 (30%), Positives = 233/528 (44%), Gaps = 78/528 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVV---------TGKTIYRDMT 52 + L+R QFA+T LYH+LFVPL++ L A+++T ++ Y ++ Sbjct: 1 MSIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLS 60 Query: 53 RFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVG 112 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+E ++AFFLE+TF+G Sbjct: 61 LLTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLG 120 Query: 113 LFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFS 172 L++FG RL HL W+VA G+ +SA IL AN +MQ P D T R + SF Sbjct: 121 LWWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFR 180 Query: 173 ELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLR-----GRERNVALRSF-AIGSVF 226 +L+ N V+ F HT + G +MA+ W+LLR G E A R+ G+ Sbjct: 181 DLLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFAAFRALSRFGAWA 240 Query: 227 GTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAL 286 GD + +VQP+K+AA EG ++T APF + ++ +R FA+ Sbjct: 241 TLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRPTFAI 299 Query: 287 KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 ++P +L LA S V GLK+L + G+ P + AF Sbjct: 300 EVPGMLSFLAKGSFSAEVLGLKDLQDAY-------------AAQFGAGDYTPWIPVAFWS 346 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 R+M+G G L LV L+ Sbjct: 347 F-------------------------------------------RLMIGVGMLAALVALV 363 Query: 407 ALVQTLRGKIDQH-----RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYS 461 L T + + R +L LP A GW TE RQPW + + T Sbjct: 364 HLWVTRKSAVLDPDPRLARGILWTLPVLPLLPLFANSFGWIFTETARQPWLVFGLFKTAD 423 Query: 462 AHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ 508 S L+ ++A SL +Y A L+ + R G + Q Sbjct: 424 GVSPGLSFAEVALSLAAFTLVYGALAWAWTLLVTRLVRRGLPELPVPQ 471 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 134/516 (25%), Positives = 207/516 (40%), Gaps = 79/516 (15%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR QF T H LF L++GL + + TG Y + FW K+F + F +G Sbjct: 31 SRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAVGFVMGT 90 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHL 127 TG+ M FQFGTN+ +S G++ G PLA EA MAFFLE+ F+G+ FG ++++ + Sbjct: 91 VTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKVSDRTYF 150 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPVSQVKFV 185 L + L FG+ LS WIL N WMQ P G ++T F P +V Sbjct: 151 LSSVLTGFGAWLSGFWILVVNAWMQTPQGYEMITRNGMEVAKLTDPIAAFFTPRMTWMYV 210 Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 H + A ++ A+ + ++A+ + + R+ + I + +A GD+ V Sbjct: 211 HMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLLLIVAAPLQAVHGDAYGRHV 270 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQ------ERNAFALKIPALLGILAT-H 298 QP K AAME ++T A H+ A P E N FA+ +P + LA+ Sbjct: 271 EDTQPQKFAAMEAHYETGT--ADLHLFAIPTSPDAIMNPSEENLFAISLPRVGSFLASGG 328 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 D V GL + P V F +G G L Sbjct: 329 DFDAVVKGLDEY------------------------EQNPPVPLVFWSFRIMVGLGFLF- 363 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 + FW R ++ Sbjct: 364 ------------------------IGLAFW------------------GGYLIYRDRLSD 381 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIM 477 L+ + + PL + A+ GW++TE GRQPW +Q L T A S+ L++ + SL Sbjct: 382 SSLYLRAMIAASPLGYAALLTGWYVTEIGRQPWVVQGELKTGEAVSSTLSSTEATLSLAA 441 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 V +Y ++A +Y ++ + +E Sbjct: 442 FVVIYIGLVVAALYTLRWLIEDELDELGAEPAPDDH 477 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 211/506 (41%), Gaps = 68/506 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+R QFA T +H + LT+GL L ++E +++ + IY D+ ++W K+F +N Sbjct: 18 ALLLARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNV 77 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ MEFQFG NW S+ G + G + ME L+AFFLE+ F+G+ FG ++ Sbjct: 78 AVGVVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRP 137 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 + H L T +VA GS SA WIL+AN WMQ P G D R + + ++FNP + Sbjct: 138 WVHFLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGPD-GRFQPVDWWAVIFNPSFPYR 196 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 +H +A + A + A+ AW+LL+ ++ A R F+ G +GD Sbjct: 197 LMHMSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHGE 256 Query: 244 EVAQVQPVKLAAMEGEWQ--TEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 QPVKLAAMEG W P + A P+ + RN + IP++ + H+L Sbjct: 257 NTRDHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIPSVGSLYLRHNLT 316 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + L + P V F +G G L+ + Sbjct: 317 GTIHSLNQFPPDELP----------------------WVPGVFFAFRAMVGLGFLMIFFG 354 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 + ++ W R MV ++ ML Sbjct: 355 ----------VAGLVVRLRGRLWEARWLQRGMVAMAPAGVIAMLAG-------------- 390 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 W +TE GRQPW I L T + S + + S + IV + Sbjct: 391 -------------------WVVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVV 431 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSE 507 Y L + M + P + Sbjct: 432 YLLVFALGMGFMLRLLAKPPGNDTPD 457 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 131/334 (39%), Positives = 198/334 (59%), Gaps = 4/334 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + LSR QFA+T ++H++F P+T+GL +L +E +++ T +Y +FW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA E + AFFLES F+ + FGW + Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLR--MEMTSFSELVFNP 178 + H L + +VA G++ SA+WI+ AN WMQ P G + +TSF ++VFNP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + + H + ++ GA ++++SAWY+L+ R + +SF + V G + + G G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 DSSA EV+ QP K AAMEG ++ AP H++ W + IP LL +L H Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMESG-APQDLHLIGWMNPSTHEVT-GISIPYLLTLLTHH 298 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEIS 332 LD + G+ ++ + P + ++ LM I Sbjct: 299 DLDTSITGMNDIPQDERPPILPVFYSFHLMILIG 332 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 1/146 (0%) Query: 370 AQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWS 429 + P + PVF+SF +M+ G L + L L RG + Q RW+L ++S Sbjct: 305 TGMNDIPQDERPPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFS 364 Query: 430 LPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIA 488 + P IA +AGW + E GRQPW + IL T A S LT + SL M +Y L L Sbjct: 365 VLGPQIANQAGWAVAELGRQPWIVYGILRTEHAVSPTLTAAEALSSLGMFFVIYALLLAL 424 Query: 489 EVYLMQKYARLGPSAMQSEQPTQQQG 514 +Y + GP E +G Sbjct: 425 FLYQITHKIHKGPDQEAGEDDGAGEG 450 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 219/493 (44%), Gaps = 65/493 (13%) Query: 20 FLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGT 79 L+ LT G+ L ++E +++ T Y RFW KL+ +NF +GVA+GL M FQFG Sbjct: 1 MLWPVLTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGL 60 Query: 80 NWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNL 139 NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ H + T LVAFG+NL Sbjct: 61 NWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANL 120 Query: 140 SALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFI 199 S WIL+AN W+Q P G F + + + + + NP F+HT A T I Sbjct: 121 STFWILSANSWLQTPAGGEFIA--GKFVVQDYFQAIANPFMVNSFLHTFFATLETSLFVI 178 Query: 200 MAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGE 259 ISAWY++ R LRSF + + + +G SA +V QP KLAAME + Sbjct: 179 GGISAWYIINQRRTEFFLRSFKVILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQ 238 Query: 260 WQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILAT--HSLDKPVPGLKNLMAETY 315 W+T PA PA + ++A P E+N + +K+P L L LD+PV GLK + Sbjct: 239 WETVPAGEPADWSLLAVPNNKVEKNEWEIKVPGALSYLLELKSKLDQPVKGLKEWEPKNR 298 Query: 316 PRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAA 375 P++ V + +G G+ L+ + + Sbjct: 299 PQM---------------------VGLIYYSFRIMVGIGLFLAGLMLITVIQWLSGKLST 337 Query: 376 MRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWI 435 + W R + G L + + + Sbjct: 338 TT-----ITQQKWLMRAWIFAGPLGYIAVETGWI-------------------------- 366 Query: 436 AIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 + GRQPW + L T A S + G++ FSL+ ++ +Y +F +A +Y + Sbjct: 367 -------VRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGSR 419 Query: 496 YARLGPSAMQSEQ 508 R GP+ Sbjct: 420 IIRKGPNLELPAP 432 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 137/505 (27%), Positives = 200/505 (39%), Gaps = 66/505 (13%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 DL+R F H L+ PLT+GL L E ++ T + +TRF+ KLF INF Sbjct: 9 DLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINFGA 68 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW +++K Sbjct: 69 GVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISKKM 128 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFV 185 HL T+ VAF S LSA+WIL AN WMQ PTG H + + ++ +FNP F Sbjct: 129 HLFATFNVAFSSMLSAMWILVANSWMQSPTGVHLE--KGLFLVDDWTAAIFNPNFLTAFP 186 Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 H +A G F+ ISAW + + R + +R+ + + + +GD V Sbjct: 187 HMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRTLTASLMALVIVAPLQVYIGDELGRTV 246 Query: 246 AQVQPVKLAAMEGEWQT----EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A+ P LAAMEG W T +++VAWP++++ N F + IP +L +L H Sbjct: 247 AEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVLSLLEDHKWV 306 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL E P + A+ +M + +G L R Sbjct: 307 STVKGLDQFKPEDRPPVLAPFYAFRIMVAAGGILMLVAFWALYLRYKGKFNALELQRRP- 365 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R ++ L + + Sbjct: 366 --------------------------WFLRAVIFSAILPYVAIWTGWW------------ 387 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 E RQPW + ++ T S ++ I V Sbjct: 388 ---------------------TREIARQPWIVHGMMRTSEGVSQMSISAEIAWFIGFVFF 426 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQS 506 + I Y K R GP + Sbjct: 427 DLVVWIGAWYFFSKVVRRGPDMHEE 451 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 163/505 (32%), Positives = 229/505 (45%), Gaps = 65/505 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSRWQFALTA++H L+ LT G+ L ++E +++ T Y RFW KL+ + Sbjct: 6 LDTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYIL 65 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GVA+GL M FQFG NW+ +S VGD FG L EA MAF LE++F+G+ FGWQR+ Sbjct: 66 NFGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRV 125 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 H + T VAFG+NLS WIL+AN W+Q PTG F + + + + + NP Sbjct: 126 PPVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVFVE--GKFRVQDYFQAIANPFMV 183 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H A T I ISAWYLL+ R N +S + V + + +G S Sbjct: 184 KSFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMALVIAPLQVFVGHLS 243 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGIL--AT 297 A +V QP KLAAME W+T PA PA + V+A P + E N F +KIPALL L Sbjct: 244 AEQVYHYQPAKLAAMEALWETVPAGTPADWSVIALPNEAAETNTFEVKIPALLSYLLALR 303 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 LD P+ GLK P L V + + G+ L Sbjct: 304 PKLDTPILGLKEWAPSDRPHL---------------------VGLIYYSFRLMVAIGLYL 342 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + A + + + ++W + + G L L + + G+ Sbjct: 343 AALA--IVTIFVWWRTGLEGDRLRNYQWLWWGW---IFAGPLGYLAVEAGWIVRCVGRQP 397 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 W + L T A S L + FSL Sbjct: 398 -----------------------WI----------VYGQLRTAEAASDLPPQVVLFSLSG 424 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPS 502 +V LYT+F A ++ + + GP+ Sbjct: 425 LVALYTIFFFAALFFGSRIIQKGPN 449 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 135/514 (26%), Positives = 212/514 (41%), Gaps = 66/514 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSR FA H L+ P+T+G+ +LL +E ++ TG + + RF+ K+F INF Sbjct: 8 PVLLSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINF 67 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 GVATG+TME FG + +S VG FG L E + AF E+ F+GL FGW +++K Sbjct: 68 GAGVATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSK 127 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H T+ V S LSA+WIL AN WMQ P G ++T++ + N Sbjct: 128 GMHAFATFNVGLSSTLSAMWILVANSWMQSPNGVVLK--NGLFQVTNWWNAILNENFTWG 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F H +A A+S+W++L+ R ++ + + + + +GD+ Sbjct: 186 FPHMWVATVELALFVFAAVSSWFILKNRNADLFTKLLKPTLLALLIVAPIQIFIGDTLGR 245 Query: 244 EVAQVQPVKLAAMEGEWQT----EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 +VA QP LAAMEG + T +H++A+P + N+FA+ IP +L +L TH+ Sbjct: 246 DVAMTQPTSLAAMEGHYHTYLPNGKVNTGWHLIAFPNAKNDGNSFAITIPHVLSLLETHT 305 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + V G+ + A+ P + A+ M I + + L G L Sbjct: 306 WNGKVTGMDSFPAKDRPDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALRKH 365 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 W R +V G L Sbjct: 366 P---------------------------WFLRSVVFSGFL-------------------- 378 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 P++AI GW+ E GRQPW + +++ TY S ++ GQ F + Sbjct: 379 -------------PYLAIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIFWFAGYI 425 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + Y + G + Sbjct: 426 VFELVVWSGAWYFFSRVIAKGVDDIAPSDTLFHH 459 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 334 bits (856), Expect = 6e-90, Method: Composition-based stats. Identities = 164/509 (32%), Positives = 243/509 (47%), Gaps = 55/509 (10%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGK 57 D ++L+R QFA T H+LFV LTLGL+ L+AI+ T V T R + +FWG+ Sbjct: 1 MDTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 L+ IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FG Sbjct: 61 LYVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W RL ++ WLV + SA WIL ANG+MQ P G +++ R +T F+ + N Sbjct: 121 WDRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVG--YEVREGRAYLTDFAAQLTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLL-RGRERNVALRSFAIGSVFGTLAIIGTLQ 236 P + V F H + A +TG +F+ +SA++LL R RER G + + Sbjct: 179 PNATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAAASTFPVYM 238 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 LG + +A QP+KLA + GE +E + I L +A Sbjct: 239 LGAAQFAVLADSQPMKLALLAGEGTSELQKDMVERHGPGDYVPPE-----WIETWLHTMA 293 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 L L+ R R R+ ++M G +G+ Sbjct: 294 NIGYLVSTLALCALLVLFRARFTRSRLLAIVMVLAVGGL-----------------FGLY 336 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 L Y D T Y IM C + L A+V G+I Sbjct: 337 LGSYLFD----TPGPYNEI----------------IMPAC------IALAAVVLGFGGRI 370 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLI 476 + R + + + ++PLP++A GW E GRQPW + L A S ++ G + SL+ Sbjct: 371 RRWRGLGWLLVVAIPLPFVASVGGWLFREVGRQPWIVYGELKVSDAVSPVSFGHMLTSLV 430 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 + VG+ + L+ ++AR GP+A Q Sbjct: 431 IFVGVLGALAVTNWTLIARFARRGPAASQ 459 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 156/499 (31%), Positives = 236/499 (47%), Gaps = 70/499 (14%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ LSR QFA+TA +HFLFVPLTLGL L+A+MET+Y +R M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFF-GWQ 119 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLAMEAL AFFLE TF+G + F G Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 R + W+VA G+N+S+LWIL ANG+MQ+P G D ++ MT F L+ N Sbjct: 121 R--QKLKAFSMWMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITNGY 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 +HT++A Y+ + +M I A++ L+G V +SF I + + LG Sbjct: 179 VWYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVLGH 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFA-LKIPALLGILATH 298 A V +QP K AAM+ W+T + P +++ P+ N+ L IP L L T Sbjct: 239 GYAQYVTALQPTKGAAMDAIWETRSS-VPMYLIQVPDSSTGSNSVQLLGIPGLASFLYTG 297 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 S + GL L + P ++ ++ LM + +L + G L Sbjct: 298 SFSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLGLYLQKSGKL------- 350 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 T+ +Y + +IP L L + + G+ Sbjct: 351 --------YTSKKYLKLLMWSIP-----------------LPYLTITAGWIVAEVGR--- 382 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 W++ L T + S++ T + S+ +I Sbjct: 383 QPWMVYGL------------------------------LRTANGVSSVPTSDVLLSISLI 412 Query: 479 VGLYTLFLIAEVYLMQKYA 497 Y + LI E+YL++K Sbjct: 413 SAFYMVLLIFEIYLIKKTV 431 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 127/498 (25%), Positives = 206/498 (41%), Gaps = 71/498 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +D +R A++ H + ++ +E +Y+ TG +YR + R W ++ Sbjct: 19 DHLDQARQMQAMSFAVHIPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIMVAL 78 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG + F+ G W + GD+FG A+E AFFLE+ F+ ++ +GW RL Sbjct: 79 FAVGVVTGTILSFELGMLWPEFMGTFGDVFGLGFAIEG-FAFFLEAIFIAIYVYGWDRLP 137 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H + + F L A ++ NGWM P G ++ +++ + L N Sbjct: 138 PKWHFASGFPIVFTGVLGATMVIAVNGWMNNPGGFRL-VNGEAVDVKPWEALFGNSFFWH 196 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLR-GRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH +A Y+ + A+ AW LR GR + AI A L +GD + Sbjct: 197 EVVHMYVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVGDWA 256 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A EVA QPVKLAA+EG +T A H+ W ++D + ++IP LL +LA H + Sbjct: 257 AREVAVHQPVKLAAIEGLQRTTSG-ASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFHDPN 315 Query: 302 KPVPGLKNLMAETYP-RLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V GL ++ E P + R A+ M I G V Sbjct: 316 ATVRGLDSVPPEDRPGPINTVRFAFQAMVLIGSGLAMLAVFVLL---------------- 359 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 +R ++ W +R +V G Sbjct: 360 ---------------VRWRKGRLPRSVWFYRALVLAG----------------------- 381 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 P +A+ GW TE GRQPW + +++ T A + + + L+ Sbjct: 382 ----------PGAVVALICGWITTEVGRQPWVVYNVMRTDEAVTGAGGVPVGYGLLA--L 429 Query: 481 LYTLFLIAEVYLMQKYAR 498 +Y L+A +++++ AR Sbjct: 430 VYVGLLVAVWWILRRLAR 447 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 141/505 (27%), Positives = 229/505 (45%), Gaps = 58/505 (11%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYV--VTGKTIYRDMTRFWGKLFGI 61 V +LSR QFA+TA+ HFLFV T+G++ I E +Y Y +T F+ ++F Sbjct: 12 VTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIFFF 71 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F GV TGL MEFQFG NWS ++ +GD+ G PLA+E++++FF+EST +GL+ F W +L Sbjct: 72 SFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWGKL 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H + + S S +WI+ N +MQ P G F ++ R +TS L+ NP + Sbjct: 132 PKRAHAWLGVGMLGASLFSIVWIIAINAFMQNPYG--FRLEGGRARLTSLITLLQNPQYR 189 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F+H + A +TG I+AW +L R+ + + IG + A GD Sbjct: 190 PEFLHVLFAILITGGFLTAGIAAWQILHKRDTSAFKIAVQIGLLIALPAAFLQPAQGDDQ 249 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAP---APFHVVAWPEQDQERNAFALKIPALLGILATH 298 A +QP+K A+EG ++TE +P AP+ + A +D A+ IP + + Sbjct: 250 GAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIPNMGTYFGKN 308 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 + +PG+ + + + + Sbjct: 309 TFTGTMPGMNAVAKMYHAKFDK-------------------------------------- 330 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG--KI 416 T A+ P V +FW+ +MV G + L A + R I Sbjct: 331 ---------TVAKSYDGQMTYYPPVTLLFWTMHLMVYAGYFFTMFALFATIMLHRRQSAI 381 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSL 475 + H L+ W L LP++ +GW + E GR P+ + +L Y A S +T + SL Sbjct: 382 EDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSVTVTEAGTSL 441 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLG 500 + + + +Y+ + + G Sbjct: 442 ALFLMADIFLVTTMIYISHRTVKRG 466 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 127/507 (25%), Positives = 213/507 (42%), Gaps = 67/507 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ R QFA T +H+LF LT+GL ++ + Y+ T Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LAME + +FFLES+F+GLF FG + Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L H + L+ GS S I+ + WMQ P G ++ + + +F L NP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ-LGD 239 ++H A VT + + I A+Y+L + + G +FG ++ + GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A V + QPV AAMEG + TE + ++ P+ ++ + +P +L L + Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDKKLDNKIAVPNILSFLTYGN 312 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 ++ + GL + +P G + +G G + Sbjct: 313 WEQEIKGLDQFEEDLHPTNISG---------------------LYYAYHIMVGLGTVFIG 351 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 +RG + Q + WS M + + ++ + Sbjct: 352 LM-------VISLFQLIRGKLFQTKWILWSLMFM------MPFPYIANTTGWYTAELGRQ 398 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMI 478 W+ + +++ T + S +++G F+L+ Sbjct: 399 PWL------------------------------VYNLMRTAAGASPTVSSGNTLFTLLGF 428 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQ 505 +GLY L + + L+ K GP + Sbjct: 429 IGLYLLLGMLFLLLVGKIINKGPHNVD 455 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 123/503 (24%), Positives = 187/503 (37%), Gaps = 64/503 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+R Q A + +H F +GL +LL E ++ TG ++ +T+ W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G +G + F+FG W + + G G ME AFF E+ FVG++ +GW+RL+ Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEG-FAFFTEAIFVGMYLYGWKRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H L W +A LS L+I+ N WM P G ++ +P + Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRG--IVEQNGKLLEAKPYAPFISPGTPP 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + VH ++A + + AI A +LRGR R IG L +GD +A Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIGLAVVLACAPLQLIVGDWAA 244 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 QP KLAAMEG + T + APF + + + L+IP L +L S Sbjct: 245 RVAGANQPFKLAAMEGLYHTG-SHAPFALGGIYDNKTGEIRYGLEIPGGLSLLEGFSTGH 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + GL + P A+ M L + G + P Sbjct: 304 VIKGLDGAPPDERPNGTLVHGAFTTMV------GAGSALIGLSLITGFVVLRRRRRGERP 357 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + AA G +L ML T Sbjct: 358 LLPTSRPWLIAAACT-------------------GPAAMLAMLTGWEVT----------- 387 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 E GRQPW + D + + +A + LY Sbjct: 388 ----------------------EGGRQPWIVGDHMRVVEGVTG--GDAVAPMFAGTLVLY 423 Query: 483 TLFLIAEVYLMQKYARLGPSAMQ 505 A + +++K A GPS Q Sbjct: 424 LGLAGALLLILRKMATGGPSGEQ 446 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 116/329 (35%), Positives = 184/329 (55%), Gaps = 4/329 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 L+R QFAL +H+LFVP++LGL ++ +ME +Y+ T K+IY+ +T FW K+F + Sbjct: 1 MSAEILARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV TGL F FG NWS ++ Y G++FG L E + AFFLES F+G+ FG ++ Sbjct: 61 TFVVGVVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 +K H +VA G+++SA WI+ AN WMQ P+G + +MTSF V +P Sbjct: 121 SKKMHFFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + +F H V+ +++G ++++SA YL + R ++ A + I L + L D Sbjct: 181 ALQRFTHVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSAD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 +A VA+ QP KLAA EG ++T+ P +++ + +ER + IP+ L +L + Sbjct: 241 VTARGVAKHQPAKLAAFEGVFKTQ-GHTPIYLLGIVDMKKERVI-GIPIPSGLSLLVHRN 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLM 328 PV GL + +P + + LM Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLM 327 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 1/142 (0%) Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 + P VA VF ++ +MV +++L+ LIA + + +L Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSWSCKKGILW 358 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVGLYT 483 + +S+ P + E GW TE GRQPW + +L T A S + GQ+ SLI+ ++ Sbjct: 359 ILSFSVLCPELCNEIGWISTEVGRQPWVVYGLLKTKDATSPIVNAGQIWQSLILFSIIFI 418 Query: 484 LFLIAEVYLMQKYARLGPSAMQ 505 L V L+ K GP Sbjct: 419 CLLSVFVSLLLKKIGEGPDEQD 440 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 131/481 (27%), Positives = 197/481 (40%), Gaps = 68/481 (14%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L R QFA T H + T+GL L ++E +++ T + +Y D+ +W KLF + Sbjct: 7 ALLLVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTT 66 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A GV TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG +++ Sbjct: 67 AAGVVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGH 126 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H T +VA GS +SA WIL+AN W+ P G D + + ++FNP + Sbjct: 127 RVHFFATCMVALGSLVSAFWILSANSWLHTPAGFARAADGNFL-PVDWLRIIFNPSFPWR 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 +H +A + A I A+ AW++LR A F++G + L GD Sbjct: 186 MLHMSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMGLWVIAIVAPLQLLAGDLHGR 245 Query: 244 EVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAA+EG WQ PA P + A P+ +RN L IP L + H+ Sbjct: 246 NTLEHQPQKLAAIEGSWQRPPAGEGEPLRLFAIPDMQAQRNRHELAIPRLGSLYLRHNWT 305 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GL+ P + A+ M + +L G L Sbjct: 306 GTIAGLREFPRSDLPPVPIVFFAFRAMVGLGLLLIAVGMLSLVLRARGRLYEAR------ 359 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R++V +L ML V T Sbjct: 360 --------------------------WLQRVVVVMAPSGMLAMLCGWVVT---------- 383 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 E GRQP+ + +L T + S L+ +A S + I+ L Sbjct: 384 -----------------------EVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVL 420 Query: 482 Y 482 Y Sbjct: 421 Y 421 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 117/512 (22%), Positives = 203/512 (39%), Gaps = 70/512 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +R Q A + +H +F + + + F +++ ++ T K +YRD+T+ W K I Sbjct: 1 MDDFLAARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA G +G + F+ G W + + G IFG P ++E AFF+E+ +G + +GW +L Sbjct: 61 FFATGAVSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEG-TAFFIEAIALGFYLYGWNKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N + H +V LS + ++ AN WM P G FD + + +FN Sbjct: 120 NPWFHWATGVVVGVSGLLSGILVVAANAWMNSPAG--FDYINGQYLNIDPIKAMFNEAWF 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H +A +V+ + + A +L+G+ ++F I +VFGT+A GD S Sbjct: 178 SQSLHMCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDIS 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +VA+ QP KLAAME + TE AP + P+ ++ +ALKIP LL +AT + Sbjct: 238 AKDVAKRQPEKLAAMEAHFHTEK-FAPLIIGGIPDTANKKVDYALKIPGLLSFMATGDFN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL + E P + A+ +M + +L + + Sbjct: 297 GEVKGLDAVPKEDQPPVAVTHYAFQVMVGLGMAMVGIAILYFI---------ALWKKKQW 347 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 D W ++ V L + + T G+ Sbjct: 348 LDSK----------------------WLLKLFVAATPLGFIALEAGWTVTEVGRQP---- 381 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 W + ++ T A + + + +S + + Sbjct: 382 -------------------WIIR----------GVMRTADAVTPMPG--IVYSFYLFTAV 410 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 Y I L+ + + S SE + Sbjct: 411 YISLAIIVSLLLYRQITMVDSLYDSESVQSKN 442 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 192/470 (40%), Gaps = 72/470 (15%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 A + +H +F L +G+ LLA + +++ T Y + + W + + FA+G +G Sbjct: 1 MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT 60 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F+ G W + ++ G G +E AFF E+ F+GL+ +G +R+ H L Sbjct: 61 GIAFELGLLWPEFMHFAGSTVGPAFTLEG-YAFFTEAIFIGLYLYGRERMRPVAHWLTAV 119 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 VA S+ + AN W Q P G D+ E + + NP V VH+ +A Sbjct: 120 AVAVSGAASSFLVTAANAWQQNPVG--VDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIAC 177 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPV 251 Y + + AW +LRGR + ++ I G +A + GD SA VA+ QP Sbjct: 178 YAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPE 237 Query: 252 KLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLM 311 KLAAME + T+ A AP + P ++ A+ VPGL + + Sbjct: 238 KLAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVA----------------VPGLLSFL 280 Query: 312 AETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQ 371 A A Sbjct: 281 AYGR-------------------------------------------------LDAEVAG 291 Query: 372 YQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG--KIDQHRWVLKMALWS 429 R P V V SF++MVG G ++LV L R ++ + R +L + + S Sbjct: 292 LDRVPRQEWPNVPLVHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLS 351 Query: 430 LPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 PL ++A+EAGW ++E GRQPW I ++ T A + + +A S+ Sbjct: 352 SPLGYLALEAGWIVSETGRQPWTIWKVMLTADAVTP-SGSTMALSMAGFT 400 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 101/331 (30%), Positives = 173/331 (52%), Gaps = 4/331 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + +R+Q A + +H +F + +G+ L+ I E +++ T + Y + R W K + Sbjct: 1 MDELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + + G I G A+E AFF+E+ F+GL+ +GW +L Sbjct: 61 LFAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 H L + VA S + +L+AN WMQ PTG F++ + + +FNP Sbjct: 120 PPKIHWLCGFPVALSGLASGVLVLSANAWMQSPTG--FELVGGQPTNIDPVKALFNPAWG 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 V +H+ ++ Y+ A + A+ A+ +LRG+ R+ I ++ + GD+S Sbjct: 178 VMALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDAS 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A VA QP KLAAMEG + +E A + WP+ ++E+ +A++IP LL LA H + Sbjct: 238 ARSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEIS 332 V GL ++ + +P + R A+ +M + Sbjct: 297 ALVRGLDSVPRDQWPNVVVVRAAFQVMVGLG 327 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 114/496 (22%), Positives = 204/496 (41%), Gaps = 70/496 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +R Q A++ +H +F + + + F + I +Y+ TG IY+ +T+ W + I Sbjct: 14 MDDFIAARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAI 73 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA G +G + F+ G W + + G IFG P ++E AFF+E+ +G F +GW R Sbjct: 74 LFATGAVSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWNRF 132 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N++ H +V S + ++ AN WM P G FD + + +FN Sbjct: 133 NRWFHWATGLVVGISGIASGILVVAANAWMNSPAG--FDYVDGKYINIDPIQAMFNDAWF 190 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H ++A +V + + A +++ + + +F I ++ +A + GD S Sbjct: 191 SQALHMMLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDIS 250 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +V + QP KLAAME ++TE A A F + P+++ + +K+P LL LA +D Sbjct: 251 AKDVGKRQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKYGIKVPGLLSFLAYGDID 309 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 KPV GL ++ + +P + A+ +M + +L + Sbjct: 310 KPVTGLHDIPRDEWPPVAITHYAFQIMIGLGMLLVLLSILYFIALFKKKSWLKST----- 364 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W FR+ V L + + V T G+ Sbjct: 365 --------------------------WLFRLFVIAIPLGYIALEAGWVVTEVGR------ 392 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 QPW I I+ T A + + +A+S + + Sbjct: 393 ---------------------------QPWIIYGIMRTIDAVTPMPG--IAYSFYVFTAV 423 Query: 482 YTLFLIAEVYLMQKYA 497 + +A +YL+ + Sbjct: 424 FVSLSVAVIYLLYRQI 439 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 202/501 (40%), Gaps = 73/501 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + SR LT +H ++ + +G+ ++AI + + + Y + R W + F I Sbjct: 4 YDPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 A+GV TG + Q W + G + PL ME AFF E+ F+G++ + W R Sbjct: 64 TVAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFMET-FAFFFEAIFLGIYLYTWDRF 122 Query: 122 -NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 N+ +HLL+ VA GS+ SA++I N +M P G F + + +FNP Sbjct: 123 ENQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQG--FALKNGEIVNIDPIAAMFNPAM 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 K H + Y+T A + +I+AW+LL+G ++ + + I + +GD Sbjct: 181 PTKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGDL 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S +A QP KLAA E ++T + AP E+D E +ALKIP L +LA + Sbjct: 241 SGKFLAVYQPEKLAAAEWHFET-SSHAPLVFFGMLEEDGE-VKYALKIPYALSVLAHNHP 298 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V GL ++ + P L + +G ++L Sbjct: 299 GAIVTGLNDIPKDERPPLYIHY---------------------LFDMMVAIGVFLMLVAT 337 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 A + V ++ W F ++ G L ++ + Sbjct: 338 AYWLGSVFRWKWTTKK-----------WFFGLLAAGGPLSMIAIEAGWYL---------- 376 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 E GRQPW ++ + T +A ++ + L++ Sbjct: 377 -----------------------AEVGRQPWILRGYMKTAE--AATSSAHVDMMLVLFCL 411 Query: 481 LYTLFLIAEVYLMQKYARLGP 501 LY + IA V ++ + R P Sbjct: 412 LYLVLGIASVIVLVRLFRRNP 432 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 137/498 (27%), Positives = 206/498 (41%), Gaps = 69/498 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSR Q A T +H +F T+GL LA++E + + TG +YR + FW K+FG+ F Sbjct: 5 ALLLSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAF 64 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 +GV +G+ M FQFGTNWS S G I G L E+ AF LE+TF G+ G R+ Sbjct: 65 GMGVVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRP 124 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 + +L LVA G+ +SA WIL N WMQ+P G + + T ++ ++FN V V+ Sbjct: 125 WFYLTSCILVAAGTTMSAFWILVNNSWMQHPVG--YVVQNGIFVPTDWAAIIFNHVVWVR 182 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F H ++ Y+T A + A+ A YLL+ R R A + + + G + Sbjct: 183 FPHMLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGD 242 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 + QP K AA+EG W T+ PA + A P+ ERN F K+P L ++A+ + D Sbjct: 243 YLHDDQPAKFAAVEGRW-TDEQPAAEVIFAIPDAAHERNRFEWKVPVLGSLIASGTADSR 301 Query: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363 GL + A P VL F G G+++ A Sbjct: 302 EVGLTDFAAADRPP----------------------VLIPFFAFRVMAGCGLIMLALAWA 339 Query: 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423 R + +A F G + +L ++ + W + Sbjct: 340 GTVAARRGRLERRRWLLWPLACSF-------PLGFIAILAG------WFTAEVGRQPWTV 386 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA-HSALTTGQLAFSLIMIVGLY 482 +L T A LT A +L + V +Y Sbjct: 387 W------------------------------GVLRTADALTPGLTAHFAAATLALFVAIY 416 Query: 483 TLFLIAEVYLMQKYARLG 500 VY + + R G Sbjct: 417 AFIFCFGVYYIVRIVRRG 434 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 124/508 (24%), Positives = 198/508 (38%), Gaps = 79/508 (15%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + SR QF T H +F L++GL + V T + Y + FW K+F Sbjct: 17 LLSPEIASRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFA 76 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 + F +G TG+ M FQFGTN+ ++ G++ G PLA EA MAFFLE+ F+G+ +G +R Sbjct: 77 VGFVMGTVTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRER 136 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNP 178 + ++L + LV G+ LS WIL N WMQ P G ++T P Sbjct: 137 VADRTYVLSSVLVGVGAWLSGFWILVVNAWMQTPRGYEMVTRNGMEVAKLTDPVAAFLTP 196 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 +VH + A ++ A+ + +SA+ + + + + + + V ++ G Sbjct: 197 RMPWMYVHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHG 256 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP------EQDQERNAFALKIPALL 292 D+ V QP K AAME ++T A H++A+P + N F + +P + Sbjct: 257 DAYGRHVEDTQPQKFAAMEAHYET--GSADLHLLAFPKSLDALTDPRTENLFTVSLPGIG 314 Query: 293 GILAT-HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 LA+ D V GL P V F + Sbjct: 315 SFLASGGDFDAEVIGLNEY------------------------EENPPVALVFWSFRFMV 350 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 G G L A ++T + + M+ +L Sbjct: 351 GLGFLFIGLALWGGYLTYRGRLTESTRYL----------KSMIAASPFGYAALLTGW--- 397 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQ 470 ++TE GRQPW IQ L T A S+ LT + Sbjct: 398 ------------------------------YVTEIGRQPWVIQGELKTSEAVSSTLTGTE 427 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQKYAR 498 +L+ V LY ++ +Y+++ R Sbjct: 428 ATLTLVGFVVLYIALILTALYVLKWLIR 455 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 145/505 (28%), Positives = 218/505 (43%), Gaps = 75/505 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA H L LT+GL +A +E + TG+ +YR ++ FW ++F + Sbjct: 4 IDALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG +R+ Sbjct: 64 SFGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ H L LVA G+ LS+ WIL N WMQ P+G F R S ++ +P Sbjct: 124 PQWAHALAAALVALGTLLSSFWILAVNSWMQTPSGYRF--VDGRFYPESIVAVLLSPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + HTV+A VT A ++ A YLL R + + + G LAI Sbjct: 182 YRLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKM--ALGFLAIAV-------- 231 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVV---AWPEQDQERNAFALKIPALLGILATH 298 PV++A + A P + + + A IP G T+ Sbjct: 232 --------PVQIALGDAHGLNTLAHQPVKLAAMEGLWDTGRGVRATLFAIP--DGARETN 281 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 + +P L +L P Sbjct: 282 RFELAIPTLGSLYLTHDPNG---------------------------------------- 301 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 + R P VA VF++FR+MVG G ++L +++ L G++ Sbjct: 302 ---------LVRGLKDWPRDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTLWRGGRLYV 352 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAH-SALTTGQLAFSLIM 477 R L + P+ ++A+ AGW TE GRQPW + ++ T + +LTT +A SL Sbjct: 353 RRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTTTDVALSLAA 412 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPS 502 V Y A L+ + RLGP Sbjct: 413 YVLCYLAMFGAGFVLLLRLVRLGPP 437 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 120/510 (23%), Positives = 199/510 (39%), Gaps = 74/510 (14%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R Q + +H + +G+ L + TG Y + R W + G+ FA Sbjct: 18 LVAARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFA 77 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G +G + F+ G W GD+ G P +E AFF+E+ F+G++ + W RL Sbjct: 78 VGAVSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEG-FAFFIEAIFLGIYLYAWDRLPPR 136 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 HLL V SA +++ AN WM P G FD+ + E +FNP + + Sbjct: 137 VHLLTGVPVVLAGVASAFFVVTANAWMNQPRG--FDLVDGEVVGVRPWEAMFNPATPPQT 194 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 VH ++A ++ + ++ A L RGR F + F A++ Sbjct: 195 VHMIVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVP--FTFAAVLA----------- 241 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 PV++A + P + A Sbjct: 242 -----PVQVAVGDWAAHFLGQYQPLKLAAI------------------------------ 266 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 +A T P E+ P+ L LL+ + PD Sbjct: 267 ----EGLARTAPGAPLSLGGIYTGGELRYALEIPNALS-------------LLAHWDPD- 308 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI-ALVQTLRGKIDQHRWVL 423 A P V V SF++MVG G L+L+ + + R + + RW L Sbjct: 309 --AIVLGLDQAPPRFQPPVNVVHLSFQVMVGIGFALVLLGIWLGVSWWRRRDLPRSRWFL 366 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYT 483 + + P +A+EAGW +TE GRQPW + D+L T A + L L+ ++ +Y Sbjct: 367 LASAAAGPAAVVAMEAGWVVTEVGRQPWIVYDVLLTRDAVNPQPG--LWAGLLTVLVVYA 424 Query: 484 LFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + A V+++++ ARLGP ++ P + Sbjct: 425 VLTAATVHVLRRLARLGPVPVRGLAPQEHA 454 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 109/508 (21%), Positives = 197/508 (38%), Gaps = 75/508 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R F T +H +F L +GL ++ + E IY T Y M + W K + Sbjct: 1 MDDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + + TG Q W + +G + P +E + AFF+E+ F+ ++ + RL Sbjct: 61 LLGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + ++ + V G+ SA+ I N + + P G F I ++ FNP Sbjct: 120 SPAMRIVAVFFVLVGAAASAVLITNVHAFEGTPAG--FKILNGKITDVDPWAAFFNPSFF 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN----VALRSFAIGSVFGTLAIIGTLQL 237 + H V++ ++TGA + +++A+ ++R R++ ++ + G + + T Sbjct: 178 ITAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN 237 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G SA + + QP KLA EG ++T + AP + + + ++E+ +A++IP L LA Sbjct: 238 GHESAQMLYEYQPEKLAGAEGLFET-RSHAPLAIGGFTDPNEEKVKWAIEIPWALSFLAA 296 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + D V GL + +P L + +G GMLL Sbjct: 297 NRFDTVVKGLNAFPRDEWPPLFIHTL-----------------------FNAMVGVGMLL 333 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 Y + + + + P W I + G L+ + + G+ Sbjct: 334 ILY----SIIGVVWRKVLKKDRFPT-----WLLIIFMTAGPFSLIGIEFGWIFACTGR-- 382 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 QPW I +L T + TTG + + Sbjct: 383 -------------------------------QPWVIYHLLKTSDVVT--TTGSIGVLFLF 409 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 +Y + A VY++ Y R P Sbjct: 410 FTFVYAVLGAAVVYVLLYYFRKHPVDED 437 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 4/333 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + + +R Q L+ +H +F + L ++ I + ++ TG Y + ++ K I Sbjct: 1 MNSLLYARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + G++ G P ++E AFF E+ F+G++ +G +L Sbjct: 61 LFAVGAVSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEG-FAFFTEAIFLGIYLYGRGKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HLL LVA LSA +++ N M P G F + R +F+P + Sbjct: 120 SPRLHLLSGALVALSGALSAFFVILVNACMNDPAG--FTMVDGRPANIDPVAAMFSPPWK 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H ++A Y A + I A LLR + ++FA+ + + +G + Sbjct: 178 HETLHGILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAVTLAIAGVTALAQPLVGHYA 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A EV + QP KLAAME ++T A AP V P+ ++ +A++IPA L + D Sbjct: 238 AVEVGRGQPAKLAAMEAHFET-SARAPLLVGGLPDVERGEVDYAIEIPAGLSVFLHADPD 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG 334 V GL + + +P + +++ +M Sbjct: 297 AVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSA 329 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 3/137 (2%) Query: 366 HVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ-TLRGKIDQHRWVLK 424 A R P V SF++MVG GS + L+ ++ V R I R L Sbjct: 296 DAVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAVVGAVLAWRRRGIPDQRPFLW 355 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 A+ + PL +A+EAGW +TE GRQPW ++ + T A + LA LY Sbjct: 356 AAILASPLGIVAMEAGWLVTELGRQPWIVRGAMRTRDAVTPFP--HLAAPFWTFTALYVF 413 Query: 485 FLIAEVYLMQKYARLGP 501 + VYL+ + R P Sbjct: 414 LGVVVVYLLVRQLRAAP 430 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 125/414 (30%), Positives = 193/414 (46%), Gaps = 69/414 (16%) Query: 96 LAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT 155 E L AFF+E+ +G+ FGW R+NKY H L + + G LSA WIL+AN WMQ P Sbjct: 2 FTYEVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTPD 61 Query: 156 GAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV 215 G ++ + E+ S+ ++FNP +++H +MA Y++ M I+ +SA+YL++ + + Sbjct: 62 GVNY--VNSKFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSF 119 Query: 216 ALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP 275 A + + I L +GD EV + QP+K AA+EG W T+ AP + A+P Sbjct: 120 AKTCIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYP 178 Query: 276 EQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGN 335 + QE+N FA++IP L ++ TH LD + GLK++ + P Sbjct: 179 SEAQEKNLFAIEIPKLASLINTHELDGELIGLKSVPEKDRP------------------- 219 Query: 336 REPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVG 395 V F +G G L+ I++G Sbjct: 220 ---VVAVVFYSFRIMVGIGTLM----------------------------------ILIG 242 Query: 396 CGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD 455 LLL R KI+ +W LK+ + PL ++A GWF EFGRQPW + + Sbjct: 243 LVGTLLLA---------RKKIESSKWFLKLCTLTTPLGFVATITGWFTAEFGRQPWVVYN 293 Query: 456 ILPTYSAHSALTTGQLAFSLIMIVGLY-TLFLIAEVYLMQKYARLGPSAMQSEQ 508 IL T + S L+ Q+ SL I+ +Y +F + + GPS E+ Sbjct: 294 ILRTEYSVSDLSFWQVFSSLASIIIVYFIIFGYFYFKYLFRIINGGPSTDGEER 347 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 109/471 (23%), Positives = 172/471 (36%), Gaps = 65/471 (13%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R A T H L VP + L F+ +M + + + R W + + FA Sbjct: 16 LLPARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFA 75 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G+ TG + F+FG W GD+FG +EA AFFLE+ + ++ +GW+RL + Sbjct: 76 IGIITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPW 134 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H + + + + A I+ AN WM P G D + + + +F P+ ++ Sbjct: 135 THFWLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQGKPIHV-DVRQAIFTPMFGPEY 193 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H V+A +T + + A LRGR F + + LGDS+A Sbjct: 194 WHFVVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTLPFTVAAILTPVQFMLGDSAARA 253 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 V QP+K AA E W+T+ P ++ D + LKIP L ILA V Sbjct: 254 VFHKQPIKFAATEIVWKTDT-HVPEYMFGRLNSD-GTISGGLKIPQLDSILAGFKPSTQV 311 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 GL ++ A P + +A + + G LL Sbjct: 312 TGLTSVPASDRPTAVQATIAH-------------------WAFDIMVTIGSLL------- 345 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 + A + A W +R G L+ + Sbjct: 346 --ILLALWYAWSWWRHRDNPGSRWFYRCAALAGLACLVTVECG----------------- 386 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 W TE GRQPW + + A ++ G L L Sbjct: 387 ----------------WITTEVGRQPWIVYQHMRVSEAVTSTRAGSLWAML 421 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 4/327 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + +R ++ +H ++ + +GL LL + E + + TG + ++ R W + + Sbjct: 1 MDDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + + G + G +ME AFF E+ F+ L+ +G QRL Sbjct: 61 LFAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEG-FAFFTEAIFLALYSYGEQRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ T + S +SA+++++ANGWM P+G F + N Sbjct: 120 SRRAQFFCTVPMVVASAISAVFVISANGWMNTPSG--FRMVNGVASDIHPLVAFANQAWP 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH A YV + A LLRGR+ ++ + GTLA+ L GD + Sbjct: 178 HQAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPLMLMSGDWA 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +A+ Q KLAA E ++T A AP + WP+ + +A+KIP LL LA + Sbjct: 238 AEALAEHQKAKLAAAEAHFKTMAA-APLVIGGWPDPETGTVRYAIKIPKLLSYLANGDAN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLM 328 V GL + P + + LM Sbjct: 297 SVVQGLDAFPLGSTPDPRIVHPFFDLM 323 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 8/321 (2%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R F + +H +F L +G+ ++ + E + ++ Y + + W K I Sbjct: 1 MDNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + + +G + W Y VG + P +E + AFF+E+ F+ ++ + RL Sbjct: 61 LLGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + ++ + VA G+ SA+ I +A+ WM P G FD + E VFNP Sbjct: 120 SPTMRIITVFFVALGATASAVLITDAHAWMNTPRG--FDYVDGVVSNVRPLEAVFNPSIY 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG----RERNVALRSFAIGSVFGTLAIIGTLQL 237 V +H + + Y+TGA + +++A+ L RG RE + + + T Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLMLSLGVALVMSFYTANN 237 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G +A + + PVKLAA EG ++T+ AP ++ P+ + R ++IP +L LAT Sbjct: 238 GHDTAIMLHEEIPVKLAAAEGLFETQ-DNAPLAILGTPDPEAGRVIGGIEIPGMLSWLAT 296 Query: 298 HSLDKPVPGLKNLMAETYPRL 318 S D V GL + + +P L Sbjct: 297 GSTDGVVQGLNDFPRDEWPPL 317 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 116/519 (22%), Positives = 203/519 (39%), Gaps = 76/519 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR LT +H +F + +G+ ++ E I + + Y + R W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 A+GV TG + Q W G PL ME AFF E+ F+G++ + W R Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFMET-FAFFFEAIFLGIYLYTWDRFK 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N + H L+ V G+ LSA +I N +M P G F I + + +FN + Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSPEG--FKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR-----ERNVALRSFAIGSVFGTLAIIGTLQ 236 K H +++ Y+T A + AI+A++LLR + E ++ + + G + T Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 +GD S +A+ QP KLAA E ++T + Sbjct: 241 VGDFSGKYLAKYQPEKLAAAEWHFETT--NEAELIFG----------------------- 275 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 G+ + A+ ++ + ++ G + V+ + D Sbjct: 276 ---------GILDEQADGSYEIKGAVKIPYALSILAGGAPDTEVIGLNEFAKEDQAP--- 323 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 V + F IMV G L + + ++ K+ Sbjct: 324 ---------------------------LFVHYFFDIMVSIGMYLAAISALFILAFRLKKL 356 Query: 417 DQ-HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 + ++W+L+ PL ++IEAGW E GRQPW + I+ +A +A T+ + L Sbjct: 357 NPYNKWLLRGIFIGGPLAIVSIEAGWMYAEIGRQPWTLYGIMR--TADAATTSTAVGPML 414 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 I+ LY L ++ + + P + +G Sbjct: 415 ILFSLLYLLLGTICTVVLLRMFKNNPVGKELADDHHTRG 453 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 16/317 (5%) Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 HTV ++T +F M + A+YL++ R +A F + F +A I + +GD YEV Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVP 305 A QP+KLA +EG+++TE A + +Q+ +++ LKIP LL L+ H + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMN 365 G+ L+ + + + ++++ Q + P Q + + A Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQAQTPEEKQKIKDQLAE----------AKVKA 169 Query: 366 HVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKM 425 H +Y+ +P + VF +F +MV G +L+ L+A +G +++H+ L + Sbjct: 170 HAFNIKYED-----LPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKGFLWL 224 Query: 426 ALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLF 485 + S+PLP++A GW E GRQPW + +L T S + Q+A S+ + +YT+F Sbjct: 225 LVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTIYTIF 284 Query: 486 LIAEVYLMQKYARLGPS 502 I +YL+ K GP+ Sbjct: 285 FIVFLYLIFKTIGKGPN 301 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 109/248 (43%), Positives = 151/248 (60%), Gaps = 4/248 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+DL+R QF +TA HFLFV LTLGL ++A+M T +V TG + MTRFWG+++ + Sbjct: 1 MDVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 N+ALG+ TGL MEFQFG +WS ++Y GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 61 NYALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+V + SA WI+ AN ++Q P GA D R+ +T L+ N Sbjct: 121 PRRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVTGD--RLALTDAGALLTNKALV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLR--GRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 F H + AG TGA ++ SA+ L R G +R + RS G V + + G Sbjct: 179 FSFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVLAVHGVPIAVAFGF 238 Query: 240 SSAYEVAQ 247 + V + Sbjct: 239 AQFATVPE 246 Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M+ G LL+ L+ L+ ++ + RW + + PLP+ A GW E GR PW Sbjct: 260 VMILIGEALLMATLLFLLPLIK-VLPHWRWTHPLLMALTPLPFAAAILGWIAREMGRYPW 318 Query: 452 AIQDILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 I+D L A S LT G + SL + TL + + L+ K R Sbjct: 319 MIRDRLTVADALSPGLTPGMITASLAGFTTVLTLLAVIDYALIAKIVRR 367 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 108/260 (41%), Positives = 149/260 (57%), Gaps = 8/260 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI----YRDMTRFWGK 57 D++DL+R QFA+T H+LFV LTLGL+ L+AIM+T + + MTRFWG+ Sbjct: 1 MDILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 ++ IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FG Sbjct: 61 IYVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W RL H+ + WLV + SA W+L ANG+MQ P G+ +T F L+ N Sbjct: 121 WDRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVV--RDGVAYLTDFGALLTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P + V H +A +TG +F+ +SA +L RGRE G + + Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGRED--FRGPLRTGVLVAAVVTFPVYAA 236 Query: 238 GDSSAYEVAQVQPVKLAAME 257 G +A QP K A M+ Sbjct: 237 GGLQYPIIAATQPAKTAMMD 256 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 73/260 (28%), Gaps = 59/260 (22%) Query: 311 MAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAA 370 + P A L G H+ + G L G+L++ + Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGREDFRGPLRTGVLVAAVVTFPVYAAGG 238 Query: 371 QYQAAMRGAIPQV-------APVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR--- 420 + P V W +M+G G LL ++ L A + R + + R Sbjct: 239 LQYPIIAATQPAKTAMMDEPGWVLWGQYVMIGLGYLLGILALAAFLVVFREPLLRRRLPA 298 Query: 421 ---------------------------------WVLKMALWSLPLPW------------- 434 W L M L P Sbjct: 299 VVAVALTAYPAGEYFGGFLFNEPGPYRGPIYLLWFLIMGAVLLSRPVGPLLRLLPILIPL 358 Query: 435 --IAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIAEVY 491 +A GW E GRQPW + L T A S LT + SL V + + Sbjct: 359 PLVASLGGWISREIGRQPWIVYGRLTTAQALSPGLTRTMIISSLAGFVVVLGALAVTNWV 418 Query: 492 LMQKYARLGPSAMQSEQPTQ 511 L+ + AR G +E + Sbjct: 419 LIARTARRGLEPAPTEPAAE 438 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 108/261 (41%), Positives = 159/261 (60%), Gaps = 6/261 (2%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+R QFALTA HFLFV LTLGL L+A+M+T +TG ++ MTRFWG+L+ I Sbjct: 1 METLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 N+A+G+ TGL MEFQFG W+ +++ G++ GA LAME L+AFF+ESTF+GL+ FGW RL Sbjct: 61 NYAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N++ HL V W+V + SA WI+ +NG++Q P GA + +T + ++ NP + Sbjct: 121 NRWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEVA--GGVLRLTDAAAVLANPAAI 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F H + + F+ +SA +L +G E+ RS IG A++ T LG Sbjct: 179 TAFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALG-- 236 Query: 241 SAYEVAQVQPVKLAAMEGEWQ 261 + QP+K+A G + Sbjct: 237 -GAQFDTAQPMKIAVYAGRTE 256 Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 76/222 (34%), Gaps = 1/222 (0%) Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 +L V R + + + + A + Sbjct: 187 GALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALGGAQFDTAQPM 246 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI-ALVQ 410 + R IP V S M+ +L++ V + AL+ Sbjct: 247 KIAVYAGRTEEVARLQAEMVAAHGPGDYIPPAGLVQGSGTAMMIIFALMMAVAWLSALLA 306 Query: 411 TLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQ 470 + + R + +PLP+ A+ AGW E GRQPW + +L T A S L+ G Sbjct: 307 LFPRAVHRLRIWHVLLTAMIPLPFAAMLAGWVFREVGRQPWTVYGLLTTEDALSDLSPGA 366 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 + FSL L+ L ++ +L+ + AR GP + + + Sbjct: 367 IRFSLAAFTLLFGLLVVVNTWLLARNARQGPVDTAAAPASAE 408 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 102/504 (20%), Positives = 201/504 (39%), Gaps = 49/504 (9%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ + H L V + + L +++I E + + +Y + + Sbjct: 1 MVNLVLFDAGLMGYSLAVHILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALI 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I FA+G A+G+ + + W + + +G + PL ME + AFF E+ F+G++ + W + Sbjct: 61 IFFAVGTASGVVVAIELFVLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNK 119 Query: 121 L-NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAH--FDIDTLRMEMTSFSELVFN 177 ++ +H L++ +A G+ +S ++I N +M P G + + + T ++ + ++ Sbjct: 120 FKSRMKHWLLSVFIAIGAVMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNT 179 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLL--RGRERNVALRSFAIGSVFGTLAIIGTL 235 P + V+ H + + GA F +A A+ LL +G ER ++ I + ++II T+ Sbjct: 180 PTTWVEIGHVIGSTIFAGAAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTV 239 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 +G S ++ QP K AA+E + + P A V + ++ IP L+ L Sbjct: 240 IIGIESITDLMLYQPEKFAALEMNFNSGPHVAE---VIGGFLVNNKTVDSINIPGLMSFL 296 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 AT S + + +L A + P V + +G G+ Sbjct: 297 ATGSFNGAIASNDSLAAY-------------------PKSTWPPVAVVHNTFDIMVGIGV 337 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 L+ + + L + Sbjct: 338 LIGVVMIIFLLIWLLNIRKIRDKFESN-------------------HFFNKILSNKIFSD 378 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 + VLK + L +E GW E GRQPW I +++ +A + T+ + Sbjct: 379 PFDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAAAN--TSPSIVPIG 436 Query: 476 IMIVGLYTLFLIAEVYLMQKYARL 499 I I+ Y + L A + ++ + Sbjct: 437 IAIIAFYIVVLPATLLFVRNVIKK 460 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 111/258 (43%), Positives = 161/258 (62%), Gaps = 2/258 (0%) Query: 251 VKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNL 310 +KLAA+E EW+T+PAPA F ++ P Q +ER +A+KIP LG++AT S+D+PV GL+ L Sbjct: 1 MKLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLREL 60 Query: 311 MAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAA 370 + +Q G +A+ +Q+I QG+ F + LGYG++L ++ P++ T Sbjct: 61 AKLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPE 120 Query: 371 QYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI--DQHRWVLKMALW 428 Q +AA + IP VAPVF+SFRIMV G L + + A R ++ D RW L+ A+W Sbjct: 121 QIKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVW 180 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIA 488 ++PLPWIAIE GW + E GRQPW I +LPT+ + S+L L SL + YT + Sbjct: 181 AIPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVI 240 Query: 489 EVYLMQKYARLGPSAMQS 506 E+ LM KYARLGPS++ + Sbjct: 241 EIKLMFKYARLGPSSLHT 258 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 107/253 (42%), Positives = 158/253 (62%), Gaps = 5/253 (1%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGKLF 59 +D++R QFA+T H++FV +TLGL+ +L ++T +T + R MTR+WG ++ Sbjct: 3 AVDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGLIY 62 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 IN+++G+A+G+ MEFQFGTNWS S+ VGD+FGAPLA+E L+AF ESTF+ L+ FGW Sbjct: 63 VINYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFGWG 122 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 +L + H L+ WLVA + SA W+L ANG+MQ PTG D R +TS + L NP Sbjct: 123 KLPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNNPS 181 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + FVH + A G + ++ +SA +L R +E++ RSF +G + G +I G Sbjct: 182 TIWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGLFGMIWAFGTGW 241 Query: 240 SSAYEVAQVQPVK 252 + V Q+QP K Sbjct: 242 AQYGFVNQIQPAK 254 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 10/119 (8%) Query: 389 SFRIMVGCGSL----LLLVMLIALVQTLRGKIDQHRWVLKMALW-SLPLPWIAIEAGWFM 443 +F IM+ L +LL+ I + K+ W W +LP P+ A AGW Sbjct: 265 AFHIMMLTAELATPIMLLLSPIVIW-----KLPAKLWFFMPLFWLALPFPFAAAIAGWVF 319 Query: 444 TEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 E GRQPW + + T A S + L S + L L L+ +L+ ++A GP+ Sbjct: 320 REMGRQPWIVYGVQKTEDAVSDIGVTTLWTSFWLFTVLLGLLLLTNWWLITRHAVRGPN 378 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 110/514 (21%), Positives = 182/514 (35%), Gaps = 85/514 (16%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVAT 69 FA T H L V L++GL + I E + + Y + K I FA+G A+ Sbjct: 15 AMFAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTAS 74 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLL 128 G M + W + VG++ P +E + +F LE+ + ++ + W+ N+++H Sbjct: 75 GTVMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWG 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFD--IDTLRMEMTSFSELVFNPVSQVKFVH 186 ++ V G+ LSA + N WM P G + T + + + + +H Sbjct: 134 LSLAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFITASTAAEELH 193 Query: 187 TVMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 A Y G I+ + L+ E+ + R I +VF L II G + Sbjct: 194 MSGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVFMILDIIYLGITGSNELS 253 Query: 244 EVAQVQPVKLAAMEGEWQTEPAP-----APFHVVAWPEQDQERNAFALKIPALLGILATH 298 + ++P+K A+E + AP H+ + A+A P + +LA Sbjct: 254 TLMVIEPIKYTALELDLHATIGTSFATMAPEHIFGVL--INHKLAYAPSFPYIQSLLAF- 310 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 ++ G L +G YG+ Sbjct: 311 -------------------------------PLTFGKGSIPGLIPLTTYKGVTDYGV--- 336 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID- 417 P V + +MVG G L+ L L +VQ R K Sbjct: 337 ---------------------WPP-YIVHDTLDLMVGFGVLMGLYWLYVVVQYFRKKDPL 374 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP------------TYSAHSA 465 HR+ L + + +E GW+ E GR P+ I+ +P T + A Sbjct: 375 SHRFTLLGGIAVAIMGVFTMEDGWYTAEVGRVPYIIRSPVPGGFVVDGVKHYGTMTIAQA 434 Query: 466 LTTGQLAFSL-IMIVGLYTLFLIAEVYLMQKYAR 498 +T L F L I I+ Y Y K + Sbjct: 435 ASTSPLVFPLGIAIIIFYLAVFPLTFYFAGKVMK 468 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 3/253 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + D + L+R QFALTA H++FV LTLGL L + + + G RFWG L+ Sbjct: 2 LEDPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYL 61 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +N+ +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGW R Sbjct: 62 VNYGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDR 121 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + ++ HL +V + SA W+L +NG+++ P G F++ +T L+ NP + Sbjct: 122 MGRWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAA 179 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE-RNVALRSFAIGSVFGTLAIIGTLQLGD 239 + F H V + GA+ + A SA++L+R + V R ++ + I G Sbjct: 180 VLAFGHIVTGSLLVGALVVAATSAYHLVRRDDAHGVFRRGIRHATLVLCVVPIPVAAFGG 239 Query: 240 SSAYEVAQVQPVK 252 Q P Sbjct: 240 VQFGLFGQDPPTS 252 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 50/111 (45%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M+ +L+ L+ + L+ G +D+ RW L + + LP++A GW E RQPW Sbjct: 284 VMMTSWALVFLLGPLMLLAWPLGGLDRWRWFLAPLVVTPFLPYLASVGGWVFRETNRQPW 343 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 + L T A + L+ S + +L+ +YAR GP Sbjct: 344 TVVHHLTTADAVTPLSPVAAVASFGFFTAAFAALAAVTYWLLVRYARRGPE 394 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 85/245 (34%), Positives = 134/245 (54%), Gaps = 3/245 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + +R QFALT+ H++FV TLG+ L+ + + ++ RFWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + +GV +GL ME Q NWS ++ G +F APLA+E + AFF ESTF+GL+ FGW R+N Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ HL +V + LSA W+L ANG+++ P G F + +T LV NP + + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERN-VALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H + + G + + +SA++L RG + + + R G V +LA+ T G + Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFPTPAAGGAQ 241 Query: 242 AYEVA 246 Sbjct: 242 YSLAG 246 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 56/111 (50%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M C ++ LV+ +AL+ L ++D+ RW+ + L +A AGW E GRQPW Sbjct: 281 VMTLCWTVFFLVLPVALLAWLVRRLDRWRWLHWLLSVMPVLALLAGVAGWLYRELGRQPW 340 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 A+ + T A + L+ S ++ G + + +L+ +YAR GP Sbjct: 341 AVWHHMTTAEAITPLSVPHAVASFVVFTGAFAVLAGITWWLLVRYARRGPH 391 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 10/326 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ R FA + H L V +++GL +L ++E I + Y +TR K + Sbjct: 1 MNIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYIAIKYKDVYYDLLTRRVAKALVM 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G A+G M + + + + + P E + AFFLE+ + +++ W Sbjct: 61 FFAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDVF 119 Query: 122 -NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAH--FDIDTLRMEMTSFSELVFNP 178 N+ H L+T+ VA G+ SA++I N WM P G + + T ++ + P Sbjct: 120 KNRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFITALTP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV---ALRSFAIGSVFGTLAIIGTL 235 + + H V+ G M + A A+ LR + ++ + II Sbjct: 180 STGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKTEEAKTLYMKGLKVTFPMNMFLIIMAG 239 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQER--NAFALKIPALLG 293 G + QP K AA++ AP H+ + +KIP + Sbjct: 240 LSGTLEMSGLLTYQPEKYAALDLNPYPIARDAPEHLFGTIVEKNGHYYVLGGIKIPFVQS 299 Query: 294 ILA-THSLDKPVPGLKNLMAETYPRL 318 +LA +L+ PVPGL T+P L Sbjct: 300 LLAGNGNLNTPVPGLSQFPTSTWPPL 325 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 11/316 (3%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVAT 69 FA T H LFV L++ L + I E + + Y + K I FA+G A+ Sbjct: 11 AMFAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTAS 70 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLL 128 G M + W + VG + P +E + +F LE+ + ++ + W+ N+++H Sbjct: 71 GTVMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWA 129 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTS--FSELVFNPVSQVKFVH 186 ++ V G+ LSA + N WM P G + L ++ + P + + +H Sbjct: 130 LSLAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELH 189 Query: 187 TVMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 A Y G + I+ A+ L+ E+ V R I +VF L II G + Sbjct: 190 MSGAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVFAILDIIYLGATGSNELS 249 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL--D 301 + ++P+K AA+E + AP H+ A+ + +P +LA Sbjct: 250 TLLVIEPLKYAALEQDMVPVTYGAPEHIFGVI--INGHPAYYVNLPLAQSLLAYPFTFGH 307 Query: 302 KPVPGLKNLMAETYPR 317 +PGL + + +P Sbjct: 308 GYIPGLSSYPSSVWPP 323 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 16/162 (9%) Query: 350 DLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALV 409 +L L Y H + P + V + +MVG G L+ LI ++ Sbjct: 291 NLPLAQSLLAYPFTFGHGYIPGLSSYPSSVWPP-SFVHDTLDLMVGFGILMGFFWLIVVI 349 Query: 410 QTLRGKIDQHR-WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWA------------IQDI 456 K R +LK+ + L + +E GW+ E GR P+ + + Sbjct: 350 MYFMKKDPLSRPLILKLTMAVAVLGVLTMEDGWYTAEVGRVPFIIKAPVGGTGIPGVYGV 409 Query: 457 LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYAR 498 + A S T+ + I I+ Y + L Y K + Sbjct: 410 MTIGQAAS--TSPVVFPLGIAIIIFYIVLLPLTFYYAFKVMK 449 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 3/313 (0%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+R QF + + LF+ L L L +LL + TG + RFW + F ++F Sbjct: 5 PLLLARIQFTASLSFLALFMALALALSWLLLFFKLRAHRTGLPGWTAAYRFWVRFFALSF 64 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 L +A L + Q G+ W + +G++ G + L F L+S F+G+ FG +R+++ Sbjct: 65 VLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLSVFILKSCFLGVMLFGQRRVSE 124 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H L ++VA G ++ W+L W+Q P GA R ++ + VFNP Sbjct: 125 RVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGATLI--DARYQVYDWYAAVFNPSLGWN 182 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 T + + A I+ ++A LR + +F V A + + D + Sbjct: 183 LGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKTALVVAVAASLLQAPVLDGAGR 242 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 +A+ QP K AA G W + P + + WP+ + N AL +P G Sbjct: 243 VMAEHQPAKAAAAAGYWHSGAEPG-WTLFGWPDARAQANRAALALPGAGGAWLGRDAQGV 301 Query: 304 VPGLKNLMAETYP 316 GL P Sbjct: 302 YQGLDKFSGMRPP 314 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 3/134 (2%) Query: 370 AQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR---WVLKMA 426 Q G P VA FW+ R+ + G+ +LLV + L T R +D + W L++ Sbjct: 302 YQGLDKFSGMRPPVALTFWALRVALLLGAAMLLVSCVTLALTARRGLDPAQLPAWWLRVI 361 Query: 427 LWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFL 486 + L + + AG + G QP+A+ + +T LA SL + LY L L Sbjct: 362 VGMLYAGGLTVLAGGVFSLVGMQPYAVNAAITQTEVLGVTSTPTLAASLAGYLVLYGLLL 421 Query: 487 IAEVYLMQKYARLG 500 A ++ AR G Sbjct: 422 AAFNGMLFHAARYG 435 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 111/567 (19%), Positives = 195/567 (34%), Gaps = 102/567 (17%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 +L R AL +H +++ LT GL + +M + TG +Y R + +NFAL Sbjct: 65 NLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLAVNFAL 124 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 G TG +EF W + + PLA+E L+AF E F+ LF R+ Sbjct: 125 GAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGRVRPPV 183 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD------------------------- 160 + + A + LS + I N WMQ P G Sbjct: 184 SIAILAAYAGFAYLSGVLITTVNSWMQAPWGVGPVAKALYPFMPEYGPNVVDVQKLVALK 243 Query: 161 -------------------IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMA 201 +T+ + + + +++P + V H ++A + G A Sbjct: 244 LAAVATGSPISLIIEKPGFAETVGIVLKDPNVALYSPYALVSMFHNILAAILIGMAVATA 303 Query: 202 ISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQ 261 A+ + + F + +I + V + P K A MEG Sbjct: 304 GWAYKYFKTGNEEYLKIVKPLAGAFAVIFVIQAPIVAHFMGEMVVEYNPTKFALMEGAVT 363 Query: 262 TEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRG 321 T P ++ ++A +KP+ G Sbjct: 364 TFNDP------------------------IIALVAYGDPNKPIVGFDQFEKACLSHGN-- 397 Query: 322 RMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIP 381 + ++++ P VLQ G L ++ + A Q AM +P Sbjct: 398 ----ATVGDLAKTLGIPTVLQLAGQTVDLNGIASL------KLSDLCLADLQKAM-SYMP 446 Query: 382 QVAPVFW---SFRIMVGCGSLLLLVMLIAL-------VQTLRGKIDQHRWVLKMALWSLP 431 V ++ +F I+ G + +LL + R D+ R V +AL + Sbjct: 447 LVHTTYYVKVAFAIIGGLAAAVLLFYFYKVPGLSSLAAAIARILGDERRRVFILALLLVL 506 Query: 432 LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALT----TGQLAFSLIMIVGL-----Y 482 I GW + E GR+PW + +L + + G LA + ++I+ + + Sbjct: 507 GTVIPAVGGWAVREIGRKPWTVYGLLYPSEVVTPVPYATSPGFLAVTYLVILAVNLGGLF 566 Query: 483 TLFLIA-EVYLMQKYARLGPSAMQSEQ 508 ++L+A Y + + G +SE Sbjct: 567 AMYLVATREYKFLELLKRGAGVEKSES 593 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQ----GNREPHVLQAFRGL 347 +G++ T SL +PG+ +L+ T ++ G A+ ++ I G F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 G LGY +LL RY D T AQ A +P V P+FW+FRIMVG G + + Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALT 467 ++R ++D H W+LK+A+ ++PLPWIA E GW + E GRQPW I+ +LPT A S L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 TGQLAFSLIMIVGLYTLFLIAEVYLMQ 494 G L ++ + +Y++ + E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLMI 207 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 36 METIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAP 95 ME +++ T IY + +FW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT 155 + +E + AFFLE+ F+G+ FGW+R + HL+ T LV G++ SA WIL+ N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTPD 120 Query: 156 GAHFDIDTLRME 167 G ++R+ Sbjct: 121 GISVIDGSIRIH 132 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 119/352 (33%), Gaps = 64/352 (18%) Query: 145 LNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISA 204 + AN WM P G D + + VF P+ ++ H V+ +T + + A Sbjct: 1 MAANAWMNTPRGFTLDASGNPVNV-DVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP 264 LL GR F + + LGDS A V QPVK AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTVPFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKTGT 119 Query: 265 APAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMA 324 P ++ D + +KIP L ILA S++ V GL ++ A P + +A Sbjct: 120 -HMPEYMFGRLRSDGSISG-GIKIPQLDSILAGFSVNTKVTGLSSVPASDRPTATQATIA 177 Query: 325 WLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVA 384 + + G LL + + +P+ Sbjct: 178 H-------------------WAFDIMVTIGSLL------VLLALWYGWCWLRHRGLPRSP 212 Query: 385 PVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMT 444 W FR G+ LL +E GW T Sbjct: 213 ---WFFRCAAVAGAACLL---------------------------------TVECGWITT 236 Query: 445 EFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKY 496 E GRQPW + + A + L L ++V +Y L L A + ++ K Sbjct: 237 EVGRQPWIVYQNMRVSEAVTDTRASSLWAMLGIVVVVYVLVLGAFLAVLLKM 288 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 79/331 (23%), Positives = 119/331 (35%), Gaps = 38/331 (11%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +D +RW A+ L H LG I + I E +Y+V + D R + + I Sbjct: 13 STLDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIF 72 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 F +G A G +EF T WS + +G P +E L AF E + L+ F W ++ Sbjct: 73 FGVGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTWGKVR 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQY-PTGAHFDIDTLRME----MTSFSELVF 176 N + H ++ AFG SA IL + P G E +TS+ Sbjct: 132 NGWVHWVIGLAAAFGGYWSAYNILAVMASLSMRPPGMIIQNLAASNETIAGLTSYLVTWA 191 Query: 177 NPV---------SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFG 227 P + V H ++A + + AI + +R + A I Sbjct: 192 KPTDAWNMFWWGANVFIFHGILAAAILTWSVVGAIYLYGYVREHRPDQAKVLKVIIPGVA 251 Query: 228 TLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALK 287 + I LG V Q P+KLAA+EG + LK Sbjct: 252 VMTAIEGFILGHDQGELVLQFDPLKLAAIEGMFWK----------------------GLK 289 Query: 288 IPALLGILATHSLDKPVPGLKNLMAETYPRL 318 + LL A + + G + A P L Sbjct: 290 VDPLLSFFAYGTFNHAFWGYYSWPANVRPPL 320 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 118/145 (81%), Positives = 132/145 (91%) Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SSAYEVAQ+QPVKLAAMEGEWQTEPAPAPFH++AWP+Q+QERNAFA+KIPALLGILATHS Sbjct: 1 SSAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHS 60 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 LD PVPGLKNLM + PRL+RGR AWLLMQEI+QGNR P VL AF +EGDLGYG+LL++ Sbjct: 61 LDTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAK 120 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVA 384 YAPDMNHVT QY+AA RGAIPQVA Sbjct: 121 YAPDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 23/203 (11%) Query: 335 NREPHVLQAFRGL-EGDLGYGMLLSRYAPDMNHVTAAQYQAAM----------------- 376 +P + A G+ E + G G+LL Y N + + + Sbjct: 10 KHQPTKIAAMEGIWETEKGAGLLLFAYPDQQNEINHYEIKIPNLASLILTHDFLGEVKGL 69 Query: 377 ----RGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPL 432 + P V VFWSFR+MVG G L++++ ++++Q LRGK+ Q ++ + +P Sbjct: 70 KEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFLHGWWISMMPS 129 Query: 433 PWIAIEAGWFMTEFGRQPWAIQDILPT-YSAHSALTTGQLAFSLIMIVGLYTLFLIAEVY 491 +IA+ AGWF TE GRQP+ + I+ T S SA+T Q+A+SLI + +YTL A Y Sbjct: 130 GFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLIAFIVMYTLIFGAGSY 189 Query: 492 LMQKYARLGPSAMQSEQPTQQQG 514 + K G ++ E+ + G Sbjct: 190 YILKLIYKGIPVIKEEEQFYKHG 212 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 6/171 (3%) Query: 151 MQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG 210 M P G F++ +M E +FNP V+ H + +T A I +I+A+ LLR Sbjct: 1 MNTPAG--FELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 RERN---VALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA 267 R+ ++ + + G + + ++ GD SA + + QP KLAA E + T + A Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDT-SSHA 117 Query: 268 PFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRL 318 + ++ ++ A+++P LL LA +S+ V GL + +P + Sbjct: 118 KLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPM 168 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 69/132 (52%), Positives = 102/132 (77%) Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 RY P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 +W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 VGLYTLFLIAEV 490 GLYTLFL+AE+ Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 3/158 (1%) Query: 9 RWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVA 68 R + H+ + +GL FL I IY T + + K F I FA+G A Sbjct: 17 RVLSLIGIEAHWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVFAVGAA 76 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG EF W + G PL E + AF LE F+ L ++GW++ K ++ Sbjct: 77 TGTASEFGLVLLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGKSAMVV 135 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAH--FDIDTL 164 + +L G SA I++ N +M PTG +D +T Sbjct: 136 LLFLSFIGPWYSAAMIVSVNSYMVAPTGIVPAYDPNTG 173 Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 100/337 (29%), Gaps = 72/337 (21%) Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLR-----GRERNVALRSFAIGSVFGTLAI 231 +PV +H + A + IMA A + ++ +F +V + I Sbjct: 287 SPVYLASILHVIGAALTVSSFTIMAAYAMRIKSYGKSPKEYKDYVNAAFKFAAVSALVTI 346 Query: 232 IGTLQL-GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPA 290 + G +A P K AAME A +Q Sbjct: 347 AIQGFVFGHEMGTSIAHYNPEKFAAME---------------ATTDQITPVTKILPGGEK 391 Query: 291 LLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGD 350 L+ +LA + P+P + ++ Sbjct: 392 LVALLAYGDPNAPLPNYDKIPSDY------------------------------------ 415 Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ 410 Q AA G+ + + + G G L+ L L + Sbjct: 416 -------------CFFPATLQEDAARIGSCKPPLIIHYLYYAKTGLGILMGLYALAIVFY 462 Query: 411 TLRGKIDQH--RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTT 468 R K + RW+L +A S+ + GW + E GR+PW I ++ AH+ Sbjct: 463 LWRTKDPEKTPRWLLSVAPLSIIIIQFVSFLGWAVREIGRKPWTIYGVMTPDVAHTVNPP 522 Query: 469 GQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 A +L+ I L L + + P ++ Sbjct: 523 SVGAVTLVAIFFLAILAALGYSVYRFLWLPGKPEEVK 559 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 64/76 (84%), Positives = 71/76 (93%) Query: 17 LYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQ 76 +YHFLFVPLTLGL FLLAIM T YV+TGK IY+DMT+FWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSFYSNYVGDIF 92 FGTNWS+YS+YVGDIF Sbjct: 61 FGTNWSYYSHYVGDIF 76 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%) Query: 170 SFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTL 229 ++ +VFNP + VH +A ++ A F+ ++AW+LLR R + A ++ L Sbjct: 2 NWWAIVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALL 61 Query: 230 AIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP--APAPFHVVAWPEQDQERNAFALK 287 A L GD + QP ++AAMEG+W + P + A P+ + RN + + Sbjct: 62 AAPLQLLAGDRQGENTLEHQPQRVAAMEGDWDARAPGSGEPMVLFAIPDMRERRNHYEVS 121 Query: 288 IPALLGILATHSLDK 302 IP + + H+L Sbjct: 122 IPRVASLYLRHNLSG 136 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 4/153 (2%) Query: 366 HVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKM 425 + R P V VFWSFR+MV G L+LL+ + +LV +GK+ + + + Sbjct: 46 NEPLNGLDTVPRENWPPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHRF 105 Query: 426 ALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLF 485 AL P ++A+ AGW TE GRQP+ + +L T + S L+T +A SLI V +Y Sbjct: 106 ALTMGPAGFVAVVAGWITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIYFAV 165 Query: 486 LIAEV----YLMQKYARLGPSAMQSEQPTQQQG 514 V +LM K G ++ P + G Sbjct: 166 FGMGVLYILHLMAKSPYRGEHGIEPGAPIRTAG 198 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 8/116 (6%) Query: 394 VGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI 453 +G ++ L L T R +I +W ++ L +LP P++A +GW TE GRQPW + Sbjct: 1 MGWSVGSGVLALAGLWVTRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWVV 60 Query: 454 QDI--------LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 L A S +T +AFSL+ +Y + + L+++Y GP Sbjct: 61 VPNPNGDQSIRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome bd quinol oxidase (CydA) n=2 Tax=Bacteria RepID=Q1PZE5_9BACT Length = 699 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 19/262 (7%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR + + H +F LG+ I+E + +G Y M + + KL FA Sbjct: 97 SRVVVWIVSELHLMFAAFVLGVPIFAVIVEIVGFKSGDIKYDKMAKEFTKLLSAAFATTA 156 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-----N 122 + G + F + + +++ +F + + +LM FF E+ + +++ W L Sbjct: 157 SLGGLLAFCLFGLYPEFMSHLTSVFAPTMYVYSLM-FFGEAFTLYGYYYSWDVLKGTSTK 215 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGW---MQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 K+ H+ + ++ + N W M P+G + S E +N + Sbjct: 216 KWCHIALGIMLNLFGTG---LMFITNSWATYMMSPSGVSMKTG----RLLSLYEAFYNEL 268 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR---ERNVALRSFAIGSVFGTLAIIGTLQ 236 +H ++A G + A +A L + ER +G+ G A+I Sbjct: 269 WMPVNLHRLIANVCFGGFVVGAYAAVKFLNSKTKEERAHYDWMGYVGNFIGIGALIPLPF 328 Query: 237 LGDSSAYEVAQVQPVKLAAMEG 258 G EV PV M G Sbjct: 329 AGYWLGREVYSASPVMGNIMMG 350 >UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive n=4 Tax=Burkholderia pseudomallei RepID=Q3JLJ0_BURP1 Length = 572 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAH-SAL 466 L G++ R L + P+ ++A+ AGW TE GRQPW + ++ T + +L Sbjct: 433 LTLWRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSL 492 Query: 467 TTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 TT +A SL V Y A L+ + RLGP Sbjct: 493 TTTDVALSLAAYVLCYLAMFGAGFVLLLRLLRLGPP 528 >UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=2 Tax=Archaea RepID=A1S0C2_THEPD Length = 396 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 6/242 (2%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 AL H + V + + L ++ ++ G + R K++ + L G Sbjct: 8 MALVFGVHIVAVNIGIALSTIVPLLVKRSRALGDKGLEGVARSLFKVYAATYGLAGVMGT 67 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + + + G++ P + ++++ L + F++GW R + H V W Sbjct: 68 AFTVFLASFYPEFVGVAGNLTMVPFGI-SIVSIMLHFFAIVAFWYGWDRFSPKVHEAVGW 126 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 L+A + L ++ P G + + + NP ++ +V+ Sbjct: 127 LLAATAYTIPLGFRAVFAFLNTPAGLVLGEKPSLNVV----QALLNPTFPPLYLKSVVGA 182 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPV 251 V G +F+ A+ A+ LR + + + ++ + + LG A + V PV Sbjct: 183 LVAGFLFVAAVLAFKGLRTALTDAERGLYVFSLRYASMLLFAMMFLGAWYAVSLVNV-PV 241 Query: 252 KL 253 K Sbjct: 242 KF 243 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 64/85 (75%), Gaps = 3/85 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +++ L+R+QFA+T ++HF FVP ++G +F++AIME++YV TGK+ Y+ MT+FWG +F + Sbjct: 8 MNIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLL 67 Query: 62 NFALGVATGLTMEFQFGTNWSFYSN 86 +FA+GV TG+ F F +S+ S Sbjct: 68 SFAVGVVTGI---FCFFIGYSYSSG 89 >UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales RepID=C7LSV8_DESBD Length = 881 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 10/197 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG-INFALGVA 68 AL A++H +G L + E + D T+ K F + LG Sbjct: 15 LLIALIAVFHVYIAHFAVGGGLFLVLTEHLGYRRQSPAILDYTKRHTKFFLLVTMVLGGI 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F ++ + F A+E + F E + ++F+ + ++ + HL Sbjct: 75 TGVGIWFIISLVAPAATSQLIHTFVFAWAIEWVF-FLCEIVSLFIYFYTFGKMGRRNHLT 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 + WL F +S I G+M P +E F + +FNP Sbjct: 134 MGWLYFFFGWMSLFMINGIIGFMLTP--------GDWLETKDFWDGLFNPSFWPALAFRT 185 Query: 189 MAGYVTGAMFIMAISAW 205 + ++ + W Sbjct: 186 FIALILAGLYGFVTATW 202 >UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ62_DESAD Length = 821 Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 20/241 (8%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATGL 71 A+ A H +G L + E + T D + K F + G TG+ Sbjct: 18 AVIATIHVFVAQFAVGGGLFLVVTEKLAYKTESGELLDYVKKHSKFFLLLTMVFGGGTGV 77 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F + + F A E + F E + ++++ W ++N+ HL++ W Sbjct: 78 ALWFTMALLSPQGTLVLVREFLFAWATEWVW-FVGEIVALLIYYYYWDKMNRRDHLIIGW 136 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK-FVHTVMA 190 + LS I +M P + E SF + +FNP F T + Sbjct: 137 FYFIFAFLSLFTINGVVSFMLTP--------GVWEETRSFWDAIFNPTFWPALFFRTALC 188 Query: 191 GYVTG--AMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQV 248 G + G A R +++++ ++ ++ T+ G + Sbjct: 189 GMLAGLFGFVTAA-------RIKDKDLRCMLVRFCGIWTLTGLVLTVFSGYWYMGSIPAE 241 Query: 249 Q 249 Q Sbjct: 242 Q 242 >UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like protein n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASZ4_RUBXD Length = 448 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 84/246 (34%), Gaps = 15/246 (6%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLT 72 A+ H L L LG + E + +VT + Y R +L I FA G A +T Sbjct: 18 AVLVQTHILIATLILGASLIAPTAEYLGMVTKQPRYERFARNLARLIVILFATGSALAIT 77 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL--NKYQHLLVT 130 T + + +Y+ +IF +EA + F + ++ W +L K H++ Sbjct: 78 FVLALVTLFPIFFSYLQNIFFWVFLVEAFL-FLGVIIVLYAWYSVWDKLAYRKSLHVVFG 136 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 ++ + I +M P+ +T + NP +H + Sbjct: 137 FVAGGIGLIQMTMINVIASYMLTPS---------EAPVTDVASTYLNPTFVPLNMHRFVG 187 Query: 191 GYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 I +AW LR +R G ++G ++ +G + + Sbjct: 188 NLSYVGFLIAGWAAWRYLRSTGEEDREYYDWMGHFGLLWGFGFLLLQPVVGYGYLKAIRE 247 Query: 248 VQPVKL 253 P Sbjct: 248 SSPEAF 253 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 46/71 (64%) Query: 378 GAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAI 437 +P+V P+FW+ RIM G L+ IA+ + + RW L++ALW+LPLPWIAI Sbjct: 2 DTVPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIAI 61 Query: 438 EAGWFMTEFGR 448 E GWF+ E+GR Sbjct: 62 ECGWFVAEYGR 72 >UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD1_CALMQ Length = 417 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 116/364 (31%), Gaps = 5/364 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M + + A H V LGL +LL +E + +G+ Y D+ Sbjct: 1 MVSPVVATVALIAWAFSVHLPLVYTVLGLGWLLPTLELLGYRSGRRTYIDIAHGLSSYLI 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +A+G G + ++N G + + + + +G ++ + R Sbjct: 61 AVYAIGGVFGTIVTVFLAGLLPVFTNIAGALLWPVWGIAIVFGVAIALPLIGFYYRSFNR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDI----DTLRMEMTSFSELVF 176 L+ +H+ V + +A + + ++ YP G +T + +E + Sbjct: 121 LSPMRHVAVGYGMAITLTVIPVMFRLVFAFINYPAGVAIAPSSTSNTGFTLSVNLTEALS 180 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 NP + T+ ++ + +I W R IG+ G + I Sbjct: 181 NPTYPPLLLATLFGAIAMTSILVSSIHGWRYASSRS-EYHELGHRIGNTVGLIFGILYSI 239 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 Y V Q P ++ G + A + + + + A++ IL Sbjct: 240 FAAWYLYTVYQYSPTVAWSIFGHPPSYLPSAFYGLYKPTFNLSWMLYMNIALGAVILILL 299 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 S+ ++ L P L + + P L + + Sbjct: 300 VVSIKVTSKPIEVLKLILTPMLMDSAEVMNGLAHVPYAIVPPVAAAEALIKAYGLSFALN 359 Query: 357 LSRY 360 ++++ Sbjct: 360 VAKW 363 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 42/77 (54%), Positives = 56/77 (72%) Query: 437 IEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKY 496 IE GWF+ E+GRQPWAI +ILP + S L+TG L FS+ +I LY F+I E+YLM KY Sbjct: 3 IECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMFKY 62 Query: 497 ARLGPSAMQSEQPTQQQ 513 ARLGPSA+++ + +Q Sbjct: 63 ARLGPSALKTGKYYFEQ 79 >UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB8_9DELT Length = 837 Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 91/285 (31%), Gaps = 21/285 (7%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATGL 71 AL A H +G L + E +G + + K F + A G +G+ Sbjct: 18 ALIATVHVYVAHFAVGGGLFLILTERAAYRSGNPHLLEYAKKHTKFFLLLTMAFGAVSGV 77 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F + + F A E + F E + ++++ W+ +N+ HL+V Sbjct: 78 AIWFTIALLAPQATITLIHNFVFAWAAEWVC-FTGEIVALIIYYYTWETMNRRDHLMVGT 136 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF-VHTVMA 190 L S I G+M P ++ F + +FNP + + Sbjct: 137 LYFIFGWFSLFLINGIVGFMLTP--------GEWLQTRDFWDGIFNPTFWSSLVFRSFFS 188 Query: 191 GYVTGAM-FIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQ 249 G F+ A R + + S + ++ + G +A + Sbjct: 189 AACAGLFSFVTAT------RISDEATRTQVLRTCSAWTIAGVLAVVATGFW---YMADLP 239 Query: 250 PVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGI 294 P + + + + + AL++P L+ Sbjct: 240 PAQYELVALKSHRVAGFMRWFWIFAGLTLMGGLILALRLPRLMTF 284 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R QFA +HF+F ++GL L ++E +++ TG+ +Y ++ R+W K+F + Sbjct: 5 LDPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAV 64 Query: 62 NFA 64 F Sbjct: 65 VFG 67 >UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU5_HYPBU Length = 403 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 82/239 (34%), Gaps = 12/239 (5%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLT 72 AL +H + V L + L + ++ +G + K + + + Sbjct: 9 ALVFAFHIVMVNLGIFLALYVPYLKRKADNSGDEDLDKVAHKLMKFYAATYGVAGVYATA 68 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMA---FFLESTFVGLFFFGWQRLNKYQHLLV 129 + + + G + P + LM FF + F ++GW R ++ H Sbjct: 69 FTVFLLSFYPDFLGLAGHLTLIPFGLAILMIVVHFFSITGF----YYGWDRWSRRVHYFF 124 Query: 130 TWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVM 189 L+A + L ++ P G ++ ++ + L NP ++ +++ Sbjct: 125 GALLALSALLIPFAFRAVFAFLNIPVG--LELSGGKLSLNVAKALTGNPTYWPLYLKSLI 182 Query: 190 AGYVTGAMFIMAISAWYLLRGRERNVAL---RSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 A GA I+ A+ ++ + + + + ++ + +G A + Sbjct: 183 AAVTAGAFAIVGGLAYSYVKATDEGYKRAVSQVVKELTPIIAIGLVLMIVMGLWYAVSL 241 >UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like protein (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLC8_9BACT Length = 569 Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 16/241 (6%) Query: 19 HFLFVPLTLGLIFLLAIMETIYVVTGKT----IYRDMTRFWGKLFGINFALGVATGLTME 74 H + L + +E +V+ Y + + K+ ++L G + Sbjct: 30 HLYYGSFVLAVPIFCMCIEFAGLVSKDKAMAKKYDQLAYDFVKISLTAYSLTAILGGILI 89 Query: 75 FQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY-QHLLVTWLV 133 F F T + + Y+ IF + + ALM F ES + ++++GW ++ L + Sbjct: 90 FTFLTLYPAFFGYLSSIFRPVMHIYALM-FVAESGTLYIYYYGWDKMKDGLLKWLHCSMS 148 Query: 134 AFGSNLSALWILNANGW---MQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 + + + + AN W M P G + R + + ++ + VH ++ Sbjct: 149 VVLNVIGTVLMFLANSWIGFMMSPAGVD---EQGRF-LGNIWHVLHTALWNPLNVHRILG 204 Query: 191 GYVTGAMFIMAISAWYLLRGRERNV---ALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 G + A +A+ L + I G +I G EV Sbjct: 205 NMAFGGGVVAAYAAYRFLSAKNDEERAHFDWMGYIAMSLGVAFLIPLPFAGYWLMREVYA 264 Query: 248 V 248 Sbjct: 265 Y 265 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 52/79 (65%) Query: 393 MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWA 452 M+ G L+ L+ A VQ LR K+ Q +LK+ LW LPLPWIAIE GWF+ E+GRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IQDILPTYSAHSALTTGQL 471 I +ILP + S L T + Sbjct: 61 IYEILPVGVSASNLNTNTI 79 >UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C6_DESRD Length = 897 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 14/236 (5%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATGL 71 AL A+ H +G L + E + TR K F + G TG+ Sbjct: 18 ALMAIVHVFVAHFAVGGGLFLVLTERKAYRENSKSILEYTRKHAKFFLLLTMVFGGLTGV 77 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F ++ + F A E + F +E + ++F+ + ++++ +HL V W Sbjct: 78 GIWFTISVLSPGATSVLIHNFLYGWATEWVF-FVVEIVALFVYFYTFGKMDQQRHLTVGW 136 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 + + S I +M P ++ +F FNP V Sbjct: 137 IYFGAAWASLFLINGIIAFMLTP--------GEWLQTGNFWHGFFNPTFWSSLVFRTFMA 188 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 V +F ++A ++ +++ + + + + ++ + G V + Sbjct: 189 IVLAGVF-GFVTATFM---KDQQARAQLIRYNARWLLVPMVFLVASGWWYLQSVPE 240 >UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XLC6_DESMR Length = 877 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 74/236 (31%), Gaps = 30/236 (12%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKT----IYRDMTRFWGKLFGINFALGVAT 69 L A+ H +G L + E + TG TRF+ + G + Sbjct: 19 LIAVLHVYVAHFAVGGGLFLVLTEAMARRTGSRPLLTYLHRHTRFF---LLLTMVFGGLS 75 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFL-ESTFVGLFFFGWQRLNKYQHLL 128 G+ + + + F A E AFF E + ++++G+ RL+ +H+L Sbjct: 76 GVGIWLTISLLSPQATLILVRSFAWGWAAE--WAFFAGEIGALLIYYYGYDRLDPKRHML 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V WL + LS I G+M P F + FNP V Sbjct: 134 VGWLYFAFAFLSLFTINGIIGFMLTP--------GDWPATRDFWDGFFNPTFWPSLVLRF 185 Query: 189 MAGYVTGAMF----IMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 G + +F + I + S + A L G Sbjct: 186 ALGLMLAGLFGFATALGIG--------DEEARETMLRASSRWAVAAAPVLLVSGWW 233 >UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F9_9DELT Length = 880 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 70/232 (30%), Gaps = 20/232 (8%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKT----IYRDMTRFWGKLFGINFALGVA 68 AL A+ H +G L + E G TRF+ + G Sbjct: 18 ALIAVLHVFVAHFAVGGGLFLVLTEAKARKAGSAPIMAYLHRHTRFF---LLLTMVFGAL 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 +G+ + F + + F A E F E + ++++G+ RL +H L Sbjct: 75 SGVGIWFTISVLSPQATLVLIRTFVWGWATEWTF-FAGEIAALLVYYYGFDRLEPARHQL 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V + + LS + G+M P + F + +FNP V Sbjct: 134 VGFFYFLFAWLSLFTVNGIIGFMLTPGQWPVTL--------DFWDGLFNPTFLPSLVLRT 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + +F + L R+ + A L G Sbjct: 186 AMALLLAGLFGFGTA----LGIRDEEARETMLRAACRWVVYAAPVLLLSGWW 233 >UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698A02 Length = 287 Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 17/183 (9%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR + A H F L L + + ++E + V +G Y M + K+ F++ Sbjct: 91 SRAVVWILAQMHLFFGALVLAVPLFVLVIELVGVTSGDERYDSMAHEFMKISLTGFSITA 150 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAP-LAMEALMAFFLESTFVGLFFFGWQRLN---- 122 G ++ + + Y+ +FGA L L FFLES F+ +++GW + Sbjct: 151 IFGGSLALALFLLYPDFMGYMMHVFGAQWLVYAGL--FFLESFFLYTYYYGWNAMRYGNA 208 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGW---MQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 K+ HL + L+ ++ +N W M P+G ++ + + + E++ P+ Sbjct: 209 KWVHLSLGLLLNGAGMT---IMVMSNSWATFMMAPSG----VNEVGAVIGNIWEVMKGPL 261 Query: 180 SQV 182 Sbjct: 262 WNP 264 >UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3EB84_GEOLS Length = 585 Score = 74.7 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 75/232 (32%), Gaps = 14/232 (6%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF-GINFALGVA 68 AL A+ H +G L + E + D + K F + G Sbjct: 15 LLIALVAIVHVFVSHFAVGGGLYLVLAERKAIKEKSQAIMDFVKKHTKFFMLLTMVFGGL 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F ++ + F A E + F +E + ++F+ + +++ H Sbjct: 75 TGVAIWFVISLIHPAATSLLIHTFVFGWAAEWVF-FLVEIVALFVYFYAFGKMDDRTHQT 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 + W+ + +S I +M P + ++F FNP Sbjct: 134 IGWIYFGAAWMSLFLINGIIDFMLTP--------GSWISTSNFWSGFFNPTFWPSLFFRS 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 ++ + L+ + R V+ +++I ++ G Sbjct: 186 FMSFMLAGCY--GFLTATFLK--DEEARHRMIRYSGVWALVSLILSVPAGWW 233 >UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1E9_PELCD Length = 430 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 85/234 (36%), Gaps = 14/234 (5%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL-GVATGL 71 A A+ H +G F L ++ET + T+ + +LF + + G TG+ Sbjct: 18 AAIAVSHVFISHFAVGGGFWLVLLETRALRHRDQPLYRFTQSFARLFVLTTLIFGALTGV 77 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F ++ + F A E ++ F +E + ++ + L +HL+V Sbjct: 78 GIWFAISLVQPAGTSALIHRFVFIWAAEWVL-FLVEVVAITVYLHSFGHLAPRRHLIVGR 136 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 + S LS I +M P + + + FNP Sbjct: 137 VYCAASWLSLFAINGIITFMLTP--------GMASQHSGLPRAFFNPSFWPSLALRTCLA 188 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 + +F+ +A+ +R++A R + + + LA+ G L G + Sbjct: 189 GLISGLFVAIFAAFLA----DRDLASRLIRMTAGWSLLALCGALPAGLWYLQSL 238 >UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H2_DESAC Length = 655 Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 16/238 (6%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF-GINFALGVA 68 A+ A+ H +G L + E + + K F + G Sbjct: 15 LLIAIMAVTHVFVSHFAVGGGLYLVMTEHKARRENDDQLLEFVKKHAKFFMLLTMVFGGV 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F G ++ + F A E + F +E + ++++ + +++ HL Sbjct: 75 TGVGIWFTIGLIQPDATSKLIHTFVFGWAAEWVW-FLVEIIALIIYYYKFDSMDERTHLK 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V W+ + LS I G+M P + F FNP Sbjct: 134 VGWIYFAAAWLSLFLINGIIGFMLTP--------GEWVNNHQFFSGFFNPTFWPS----- 180 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVAL-RSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 + + + + A++ + + S++ L+++ + G + Sbjct: 181 LWFRFAISTLLAGVFAFFTTAFIDVEAFRLKMTRYSSLWCLLSLVVVIPTGYWYLQVL 238 >UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like n=2 Tax=Desulfovibrio RepID=Q316Q4_DESDG Length = 841 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 84/264 (31%), Gaps = 18/264 (6%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN-FALGVATGL 71 A+ A+ H +G F L + E V D R + F + G TG+ Sbjct: 18 AIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGV 77 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFL-ESTFVGLFFFGWQRLNKYQHLLVT 130 + F ++ + F A E AFFL E + ++ + + + + H+ V Sbjct: 78 GIWFTISVLSPTVTSTLTHSFAFGWAAE--WAFFLGEIAALLVYHYYFDSMPRKAHIKVG 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 W+ AF + +S + I M P + F + FN Sbjct: 136 WVYAFFAFMSLVVINGIITVMLTP--------GKWAQTHLFWDGFFNVSFWPSLSLRFAL 187 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQP 250 + +F ++A +R R +++ L G Y + P Sbjct: 188 CLMFAGLF-AFVTA---IRIPHEETRERMVRRAAMWVGLPFAAAALSGIW--YLLILPDP 241 Query: 251 VKLAAMEGEWQTEPAPAPFHVVAW 274 + ME QT F + Sbjct: 242 QQSMVMERSTQTPHLVQAFIPLGI 265 >UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3P6_DESDA Length = 459 Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 87/227 (38%), Gaps = 14/227 (6%) Query: 13 ALTALYHFLFV-PLTLGLIFLLAIMETIYVVTGKTIYRDMTR-FWGKLFGINFALGVATG 70 AL A+ H + L +GL+ ++ + +T+ + + ++R G + ++G TG Sbjct: 18 ALDAVLHVIISHGLAIGLMTMIILFQTLTWMGKGEHWAKISRSLLGPTVVVITSVGAVTG 77 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN---KYQHL 127 + + F + +F P +E AF E + ++++ W RL + Sbjct: 78 VGIWFITSILAPEGIGSLIHLFFWPWFIE-WGAFTSEVILLLIYYYLWDRLAEKQPGKLA 136 Query: 128 LVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHT 187 + W + SA+ I G+M P G + F + FNP + Sbjct: 137 ALGWGYVVMAVFSAILISGILGFMLTPDGWPWG--------QDFDQAYFNPTFAPQVFLR 188 Query: 188 VMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGT 234 + AG G++ + A AW + + + G +A+ G Sbjct: 189 LAAGLAIGSLLLTAWIAWRFKGTAQERGSALRLSGGVFLACVAVAGV 235 >UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B0F5_9RHOB Length = 152 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD + QP K+ +EG W+T+P P ++A P Q N F + IP ++ Sbjct: 21 GDMRGLNTLEYQPAKVTEIEGNWETDP-NIPLLLLAIPNQGTRSNNFEIAIPNGAPLILK 79 Query: 298 HSLDKPVPGLKNLMAET 314 H + PG + + E Sbjct: 80 HKANGLAPGHNDFVLED 96 >UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V8T0_SULSY Length = 455 Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 86/249 (34%), Gaps = 15/249 (6%) Query: 4 VIDLSRWQFALTALYHFLFV-PLTLGLIFLLAIMETIYVVTGKTIYRDMT-RFWGKLFGI 61 + R FA+ A+ H L +G +LA+ + + T D+T + LF Sbjct: 10 PVLGHRLIFAIDAILHVLISHGAAVGGSIVLALTQWYAIKTNDQKLYDLTYKILFVLFIA 69 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFF-----F 116 A+G TG+ + + +F E ++ F +E F+ +F + Sbjct: 70 ATAIGALTGIGIWIHANIIDPPAIGSLLRVFFWKWFTEWIV-FNVELIFLLAWFLTWKTY 128 Query: 117 GWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVF 176 GW++ K + + VA S L+ + I G+M P G D + +F Sbjct: 129 GWEKRTKNLKFGIVYAVA--SWLTMVIITAILGFMLTP-GNWLKSD--FPAQPDYIASLF 183 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 NP + G +++ + + + ++ I T+ Sbjct: 184 NPSWIPSL--MFRTFFAIGFAAAISMYWTWWFTRNDLALREKAERWFGRIVLATIPITII 241 Query: 237 LGDSSAYEV 245 G ++ Sbjct: 242 FGLWYYAQI 250 >UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWM7_HALO1 Length = 490 Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 10/183 (5%) Query: 17 LYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRD-MTRFWGKLFGINFALGVATGLTMEF 75 ++H +G LL E + M F+ L ++F LG TG+ M F Sbjct: 33 IFHVFLAQFAIGGGMLLCYFEHLRASGKVPAAAHFMDGFFKVLVLVSFVLGALTGVGMWF 92 Query: 76 QFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAF 135 + + D F A+E F LE F+ RL + + Sbjct: 93 TSIQTSARTIGLMVDAFHWLWAVEWTF-FLLEVVTGYTFYRYGDRLPDRLRQRLLIFYSI 151 Query: 136 GSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTG 195 + S WI W P +E + FNP ++ + Sbjct: 152 AAWGSLFWINGILSWQLTP--------GAWLENGNVWAGFFNPSFFPSLLYRTLVSMTIA 203 Query: 196 AMF 198 A+ Sbjct: 204 ALV 206 >UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea RepID=A4WI49_PYRAR Length = 368 Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 74/226 (32%), Gaps = 12/226 (5%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLT 72 L H LF +TLG + A + R K+ ++ G Sbjct: 13 GLAVTLHILFTAMTLGTGLIAAYYRWLAYRKNDAWSELFARKAFKVLIVSELFSGVWGTI 72 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWL 132 + ++ + + P+A+ A+ + + + + ++ W +++ H L+ W+ Sbjct: 73 ITVFLAGFFTALTTLATNALFIPIAI-AIASIMVRIPTIAISWYTWGKIHPKTHSLIMWV 131 Query: 133 VAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGY 192 +A + P + + T E NP+ ++HTV A Sbjct: 132 MALSGFGIPFGFRAIFAEINNPVAVGYYLQTGNNPGFMPYE---NPLFWTLYLHTVAAVI 188 Query: 193 VTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 TG ++ + + + G L ++ L LG Sbjct: 189 STGGFVAASLMSL--------EKDPKGISTALKIGFLVLMAQLSLG 226 >UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHW0_THEYD Length = 883 Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 16/190 (8%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGK----TIYRDMTRFWGKLFGINFALGVA 68 A+ A++H +G L + + V G R F+ + G Sbjct: 18 AIIAVFHVFISHFAVGGGIFLWLTDLKSVREGNISLRQYVRKHVWFF---LLLTMVFGGV 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F + + ++ + F A+E + F +E + ++ + ++ L+ L Sbjct: 75 TGVGIWFIIALSSPWATSLLIHTFVFAWAIEWVF-FIVEIVSLLIYHYKFETLSDKNRLR 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 + ++ A + LS I +M P + SF + FNP + V Sbjct: 134 IAFIYAASAWLSLFVINGIITFMLTP--------GQWLRTHSFWDGFFNPTNLPGLVFRT 185 Query: 189 MAGYVTGAMF 198 + +F Sbjct: 186 AICIMFAGLF 195 >UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibium RepID=B2V8T1_SULSY Length = 457 Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 11/227 (4%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 ++ L H +F+ + LG L I I + Y + I+ +G G+ Sbjct: 39 VSFLVHIVFINVLLGSSVLSVINNWIGHLKNDKNYDKVAYLLTTPVTISENMGALWGVAP 98 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL--NKYQHLLVTW 131 ++ + Y + +P + + + L+ F W +L +K H Sbjct: 99 LLIVSVMYTAF-FYSASVMNSPQWLHIIWGNVVAFLISYLYKFTWHKLEDHKALH----- 152 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 + G+ + L++ +M + T T F ++V P + H + Sbjct: 153 -ITIGAIAAILFLSLPPVFMST-VQLYITPSTWTPN-THFWDVVSRPDVLFRLAHFYLGA 209 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + MF++ + +G++ A G + + + L +G Sbjct: 210 FAVNGMFMLLYGVYKKSKGQDLEAANILIRQGKAWFLVPTVLNLFVG 256 >UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibrio vulgaris RepID=A1VBG6_DESVV Length = 430 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 10/190 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVA 68 A+ ++ H +G FLL T G + + + F + + G Sbjct: 15 LLVAIISVLHVFVAQFAVGGGFLLVHAATRAERAGSAEATFWVKRFTRFFLLLSMVFGGV 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 +G+ + ++ + F A E + F E + ++++G+ ++ H Sbjct: 75 SGVGIWVIISLISPAATSLLVHRFVYAWATEWVF-FLGEIVALLVYYYGFGKMRFEDHRN 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V L + LS I +M P M+ F + FNP + Sbjct: 134 VGLLYGLFAYLSLFMINGIITFMLTP--------GAWMQTQGFWDGFFNPTFWPSLLFRS 185 Query: 189 MAGYVTGAMF 198 + +F Sbjct: 186 ALCAMLSGLF 195 >UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARV9_RUBXD Length = 450 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 98/271 (36%), Gaps = 14/271 (5%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + + +R L L H F L +G +++ TG + + + Sbjct: 21 FSSLGGARVITGLVMLIHIFFAELFVGFALAAPVLQYWGARTGTPRMDRLAHSLVRFNVL 80 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR- 120 F+ G + + + + F + + A+++ L + +++ W R Sbjct: 81 TFSTGATFAVLFLVLLVGLYPQVTASLFTHFFYLVVI-AMLSMLLALWGMYTYYYKWDRY 139 Query: 121 --LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSE---LV 175 LNK +H+ + + + + + + +M G + SF + Sbjct: 140 SVLNKGRHIAFGFSMGVFIWIWMVIMTGIDTFMVT-GGGARTPGISAENVASFGAALQAM 198 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR---ERNVALRSFAIGSVFGTLAII 232 FNP+ +H A A + A +A+ R + +R + ++G ++G ++ Sbjct: 199 FNPMFVEMSLHRTFANLSWPAFAMAAWAAFMYARSKTPEDRAFFDWTTSVGLIWGAGLLM 258 Query: 233 GTLQLGDSSAYEV---AQVQPVKLAAMEGEW 260 G + AY + A V PV AA G + Sbjct: 259 LQPFSGFAIAYAMKLSAPVDPVSGAAEGGAY 289 >UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK9_ARCB4 Length = 466 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 15/250 (6%) Query: 9 RWQFALTALYHFLFVPLT--LGLIFLLAIMETIYVVTGK-TIYRDMTRFWGKLFGINFAL 65 R A+ A+ H +FV +G +LA + Y + + F I+ ++ Sbjct: 17 RMLMAINAIIH-VFVSHGGAVGGSVVLAALAWWANKKNDMQAYNLIYKVVMVFFIISTSV 75 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR----- 120 G TG+ M + +F +E ++ F E + L F W++ Sbjct: 76 GALTGVGMWIHANILSPNAIGGLIRVFFWKWFIEWIV-FNFEVVLLLLLFMTWKKNQQTP 134 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT--GAHFDIDTLRMEMTSFSELVFNP 178 + + + A S L+ + I +M P G + + ++ +FNP Sbjct: 135 EGRAKTVRFGVYYAISSWLTMVIITAILAFMLTPNFDGQPWVDPEVYPGNVDYNNALFNP 194 Query: 179 VSQVKF-VHTVMAGYVTGAMFIM--AISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 T + A+ IM I A + ++ R + + + + Sbjct: 195 TWWPSLAFRTFTSIAFAAALAIMWTWIIATFSKNEEDKEAKARLIKFLAAIMLITVPISA 254 Query: 236 QLGDSSAYEV 245 G E+ Sbjct: 255 IFGYWYYTEI 264 >UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU9_CHIPD Length = 499 Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 24/241 (9%) Query: 9 RWQFALTALYHFLFV-PLTLGLIFLLAIMETIYVVTG------KTIYRDMTRFWGKL-FG 60 R+ A+ A+ H + L +G I L+ +E V + + K+ F Sbjct: 14 RFLIAMIAIIHVIINHGLAVGFIPLVTWLEQKGVKNSHAMEITDLSWDKLAWKMMKVGFI 73 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I LG TG+ + F + +F E ++ F E + ++F W+ Sbjct: 74 ITTTLGAMTGVGIWFSVALVSPASIGSLIRVFYWAWFTEWIV-FVTEVVLILIYFLSWEN 132 Query: 121 LNKYQ-----HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV 175 NK H+ W ++ S ++ + I++ G+M P S Sbjct: 133 ANKSLTSKLRHIRFGWFLSIFSWITMVIIVSILGFMMDP--------GNWNTHHSLLNGF 184 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 NP+ + + V G +F + L ++ R+ S + +L Sbjct: 185 TNPIYIPQLLFRTPTAMVVGGVF--GLMLITLFTENGTSIRKRAIRSASAWILCWAPLSL 242 Query: 236 Q 236 Sbjct: 243 A 243 >UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales RepID=D1AZW3_SULD5 Length = 445 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 4/190 (2%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN-FALGVA 68 W +T H LF ++G L A + ++ Y + +G I + LG Sbjct: 19 WMMGITGTIHILFSHTSVGAAMLFAFLAHKAYKENRSDYYPYMKKYGMFLLIFSYVLGSI 78 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG + + + + F A E + F E V + + +++K HL Sbjct: 79 TGPGIWYTATAASPRGISALIHNFVWVWATEWVF-FIYEVIGVFVLVYFMNKIDKKTHLQ 137 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 +T+ A S + I+ +M +P + + F + P ++ + Sbjct: 138 LTYTFAIASVGTLALIIGIISFMMWPGTQAYYATGSASDA--FFGINTFPHMFLRVGFMI 195 Query: 189 MAGYVTGAMF 198 M V G + Sbjct: 196 MMSGVIGLLI 205 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 25/35 (71%), Positives = 30/35 (85%) Query: 111 VGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWIL 145 +GLFFFGW RL+K +HLL T+ VAFGSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWIF 35 >UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I0Y1_THIIN Length = 493 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 4/194 (2%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN-FALGVA 68 W + H L ++G L A++E+ V K + +G + + G Sbjct: 20 WVMGIIGTIHVLASNTSVGAAVLFALLESRSVRENKPEIMQYIKKYGMFLLVFSYIWGSV 79 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG + + + + F A E + F +E V + +++ HL Sbjct: 80 TGPGIWYSTTVASPRGISALIHNFVWAWATEWVF-FTVEVIGVYALVYTIGKIDPKTHLK 138 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 +TW S + + I+ +M +P + + + F L F + + Sbjct: 139 ITWTFVVSSVATLVLIIGILSFMMWPGSDRWYLTGSVFDA--FYNLNFAAQLADRGFLML 196 Query: 189 MAGYVTGAMFIMAI 202 + V G++ + AI Sbjct: 197 TSAAVVGSIIVAAI 210 >UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME3_THISH Length = 473 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 83/233 (35%), Gaps = 14/233 (6%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ S W L A H LF ++G A + TI + + +G LF + Sbjct: 11 YEPTIGSGWVVGLIATIHVLFSHTSVGAAIFFAFLATIAYRRNQPELLTFIKKYG-LFLL 69 Query: 62 NFA--LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 FA G TG+ + + + + F A E + F +E V + + Sbjct: 70 VFAYVAGSITGVGIWYSTTVASPRGISALIHSFVWKWATEWVF-FVIEVVGVYMVVYLVG 128 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 ++++ HL +TW+ A S + L I+ +M +P + + + + Sbjct: 129 KVDQRTHLRITWIFALASYATMLIIIGILSFMLWPGKEAWFAEGG------YLNGFYGSN 182 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAII 232 + + A T + I A L + ++ + G ++ I Sbjct: 183 TFAQLA-MRSAFMFTMTAVVGGIVASRL---TDLDLRREIIRKLAWLGIVSTI 231 >UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B63 Length = 474 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 15/201 (7%) Query: 2 WDVIDLSRWQFALTALYHFLFV-PLTLGLIFLLAIMETIYVVTGKTIYRDMTRFW-GKLF 59 D + R L A H L PL +G +L ME + + +F Sbjct: 8 LDHVAGGRLIIGLIASLHVLINHPLAVGAYPILTWMEWWAHKHQRPDIDRLAYRVTSVVF 67 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 + +G TG+ + F + +F E L+ F E + +F W+ Sbjct: 68 IVTTTVGALTGVGIWVSTSLFAPFAIGSLLRVFFWGWFAEWLV-FISEVGLIMWWFLSWK 126 Query: 120 RLN----KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV 175 + N K +H+ + ++ S + I+ G+M P + +F + + Sbjct: 127 QANTPEKKRRHIKIGVALSVMSWFTMALIVAVLGFMMKP--------GEWSQTRAFLDAM 178 Query: 176 FNPVSQVKFVHTVMAGYVTGA 196 NP+ + +TGA Sbjct: 179 VNPLYLPQLGFRTFFALMTGA 199 >UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK8_ARCB4 Length = 441 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 83/231 (35%), Gaps = 22/231 (9%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 + + H F+ + +G I + V + Y ++ +G G+ Sbjct: 29 IVFVVHICFIYMLIGASTASVIYNIMGVFKKDSNYDKFAYRMTNYTTVSENMGALWGVAP 88 Query: 74 EFQFGTNWSFYSNYVGDIFGAPL---AMEALMAFFLESTFVGLFFFGWQRL--NKYQHLL 128 ++ + + ++AF L + F W L +K H+ Sbjct: 89 LLVISVLFTGFFYTAILKISPHILHIIYGNIIAFLLS----YAYKFSWHALQNHKGFHIA 144 Query: 129 VTWLVAFGSNLSALWILNANG--WMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 + L A + + +I + +MQ P L + + E++F PV+ + ++ Sbjct: 145 IG-LSAVLAFFTLPFIFMSMSNLYMQ-PE--------LFASINNIWEIMFTPVTGFRLLN 194 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 + ++ + ++ I A ++ RG + + S + G + LA + + Sbjct: 195 FFLTAFMATGIVMIFIGARWVKRG-DTEIGKISISQGKKWFLLATPLNIVV 244 >UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n=2 Tax=Geobacillus RepID=C9RX36_GEOSY Length = 65 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG 44 +D + LSR LT +H ++ + +G+ ++AI + + + + Sbjct: 4 YDPVWLSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRSK 46 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 28/52 (53%), Positives = 42/52 (80%) Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 A+S+LT G L FS+ +I GLYTLFL+AE++LM K+ARLGPS++++ + +Q Sbjct: 2 ANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 53 >UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chloroflexaceae RepID=B8G4R1_CHLAD Length = 470 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 12/193 (6%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI-YRDMTRFWGKLFGINFALGVATGL 71 A+ + +H L LT+ + +E V + Y + R L + G G+ Sbjct: 17 AIVSAFHVLASHLTVAAAWFNLYLERRAVYEQRPELYVYLKRSALGLLVFAYVFGAMAGV 76 Query: 72 -TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + N S + + F E M F ++ + +++ + R++ HL + Sbjct: 77 GIWQTTTAANPRGISTLIHN-FVFYWGAEWYM-FLIDVVGIIAYYYSFDRVSPRIHLRLA 134 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 W++A G + I+ + P L +E + FNP + + Sbjct: 135 WILALGGTGTLTIIVGILSFKLTP--------GLWLETGNSLNGFFNPTFWPQILLRFSL 186 Query: 191 GYVTGAMFIMAIS 203 + A + + IS Sbjct: 187 MFTITAAWALLIS 199 >UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU8_CHIPD Length = 446 Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 35/199 (17%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 ++ L H +FV L +G L E + Y K +N +L V G+ Sbjct: 32 ISFLAHIVFVNLMVGGSLLTLWAEIKGLK--DKDYDKFAYEMAKTITVNKSLAVVLGVAP 89 Query: 74 EFQFGTNWSFYSNYVGDIFGA------PLAMEALMAFFLESTFVGLFFFGWQRLN--KYQ 125 T +S Y + G PL +AF L L + W +L+ K Sbjct: 90 LLSINTLYSVYFYSANALTGLMWISVIPL---VTIAFLL----TYLHKYSWYKLSDNKAL 142 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRM-----EMTSFSELVFNPVS 180 H+ + + L L+I P +I+ + + F + P Sbjct: 143 HIA----IVGAAVLIFLFI---------PLIFLVNINLMLFPEKWGTVGGFLSALVLPNV 189 Query: 181 QVKFVHTVMAGYVTGAMFI 199 +++H + A +F+ Sbjct: 190 FPRYLHFIFASLGVTGLFV 208 >UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcus capsulatus RepID=Q609P5_METCA Length = 455 Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 57/146 (39%), Gaps = 2/146 (1%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN-FALGVA 68 W + A+ H L ++G + + T+ V + + R +G + + LG Sbjct: 23 WVLGIIAVVHVLASHTSVGAALVSTWLATVAVRRNRPELLEYVRRYGVFLLVFSYVLGSI 82 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG + F + + + A E + FF+E + L + +++ +L Sbjct: 83 TGPGIWFSATVASPRGLSALIHSYVWWWATEWVF-FFIEVIGIYLLVYLAGKVDGRSYLK 141 Query: 129 VTWLVAFGSNLSALWILNANGWMQYP 154 + W+ S + L I+ +M +P Sbjct: 142 IAWIFGLASWATMLIIVGILSFMMWP 167 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 503 e-141 UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 500 e-140 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 466 e-130 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 451 e-125 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 447 e-124 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 446 e-124 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 443 e-123 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 427 e-118 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 426 e-117 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 426 e-117 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 422 e-116 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 421 e-116 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 415 e-114 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 411 e-113 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 409 e-112 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 408 e-112 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 404 e-111 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 400 e-110 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 397 e-109 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 397 e-109 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 396 e-109 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 394 e-108 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 392 e-107 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 390 e-107 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 390 e-107 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 390 e-107 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 390 e-107 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 390 e-107 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 388 e-106 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 378 e-103 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 373 e-102 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 373 e-101 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 372 e-101 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 370 e-101 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 368 e-100 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 366 1e-99 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 366 1e-99 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 366 1e-99 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 365 2e-99 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 365 2e-99 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 363 9e-99 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 363 1e-98 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 361 4e-98 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 360 5e-98 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 359 2e-97 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 356 1e-96 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 353 7e-96 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 352 2e-95 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 350 8e-95 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 349 2e-94 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 348 3e-94 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 347 9e-94 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 345 2e-93 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 344 4e-93 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 344 4e-93 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 344 4e-93 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 344 6e-93 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 342 2e-92 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 342 2e-92 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 341 4e-92 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 341 4e-92 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 340 7e-92 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 338 4e-91 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 337 8e-91 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 332 2e-89 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 332 3e-89 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 329 2e-88 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 326 1e-87 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 326 1e-87 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 324 6e-87 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 322 2e-86 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 322 2e-86 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 322 2e-86 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 320 8e-86 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 317 6e-85 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 315 3e-84 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 314 4e-84 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 312 1e-83 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 311 5e-83 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 309 2e-82 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 308 5e-82 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 304 7e-81 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 303 8e-81 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 302 2e-80 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 301 3e-80 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 300 7e-80 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 296 1e-78 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 295 3e-78 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 293 8e-78 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 290 7e-77 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 289 2e-76 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 286 2e-75 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 285 4e-75 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 283 9e-75 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 283 1e-74 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 273 1e-71 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 266 1e-69 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 262 3e-68 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 254 6e-66 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 246 1e-63 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 244 6e-63 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 236 1e-60 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 228 3e-58 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 226 2e-57 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 223 2e-56 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 221 4e-56 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 217 1e-54 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 209 1e-52 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 209 2e-52 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 208 3e-52 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 203 1e-50 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 202 3e-50 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 200 9e-50 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 192 3e-47 UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like... 192 3e-47 UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalob... 191 6e-47 UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like... 190 1e-46 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 189 3e-46 UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales ... 187 8e-46 UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like... 177 1e-42 UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like... 176 1e-42 UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like... 176 2e-42 UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like... 176 3e-42 UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibri... 172 2e-41 UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulf... 172 4e-41 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 166 2e-39 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 164 6e-39 UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 162 3e-38 UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like... 154 7e-36 UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter c... 146 1e-33 UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome b... 143 2e-32 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 143 2e-32 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 141 6e-32 UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibri... 140 1e-31 UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensi... 138 5e-31 UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobac... 137 7e-31 UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp... 135 3e-30 UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfuri... 135 3e-30 UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfo... 134 1e-29 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 131 7e-29 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 130 8e-29 UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales R... 130 2e-28 UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like... 129 3e-28 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 128 5e-28 UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like... 127 9e-28 UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like... 126 2e-27 UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas in... 125 4e-27 UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=... 124 6e-27 UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibiu... 123 2e-26 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 120 1e-25 UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 118 5e-25 UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like... 117 1e-24 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 116 2e-24 UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubroba... 115 5e-24 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 110 1e-22 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 107 1e-21 UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=... 107 2e-21 UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobac... 104 8e-21 UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive... 104 1e-20 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 102 4e-20 UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea Rep... 98 7e-19 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 84 1e-14 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 78 1e-12 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 74 2e-11 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 72 4e-11 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 70 1e-10 UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 65 8e-09 Sequences not found previously or not previously below threshold: UniRef50_D0L1U5 Cytochrome c class I n=2 Tax=Proteobacteria RepI... 116 2e-24 UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcu... 113 2e-23 UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chlorof... 102 3e-20 UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinens... 72 4e-11 UniRef50_UPI0001744B64 putative Cytochrome-c oxidase n=1 Tax=Ver... 63 3e-08 UniRef50_C7LSV7 Putative uncharacterized protein n=1 Tax=Desulfo... 49 4e-04 UniRef50_C8X0C5 Putative uncharacterized protein n=1 Tax=Desulfo... 48 8e-04 UniRef50_Q1K0H3 Putative uncharacterized protein n=1 Tax=Desulfu... 47 0.002 UniRef50_C0GRA3 Putative uncharacterized protein n=1 Tax=Desulfo... 46 0.003 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 46 0.004 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 45 0.006 UniRef50_D1UBB9 Putative uncharacterized protein n=1 Tax=Desulfo... 45 0.008 UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n... 45 0.008 UniRef50_B8DQZ1 Putative uncharacterized protein n=1 Tax=Desulfo... 45 0.008 UniRef50_UPI000186E483 hypothetical protein Phum_PHUM440230 n=1 ... 42 0.041 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 503 bits (1294), Expect = e-141, Method: Composition-based stats. Identities = 292/511 (57%), Positives = 390/511 (76%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 V+DLSR QFA+TALYHFLFVPLTLG+ FLLAIME++YV+TGK +Y+DM +FWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV TG+TMEFQFGTNW++YS+YVGDIFGAPLA+E L AFFLESTF+G+FFFGW RL+ Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K QHL VTWLVA GSNLSALWIL ANGWMQ+P GA F+ +T+RME+ F L+ NPV+QV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHTV +GYVTGA+F++AIS++YLL+ R+ A RSFAI S FG +I+ + LGD S Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 YEV +VQ KLAA+E EW+T PAPA F ++ +P ++++R FA+KIP +LGI+AT SLD+ Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+K+L+A+ R++ G + + L++E+ GN+ P + AF ++ DLGYG+LL +Y P Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 ++ + Q + A + IP VA +FWSFR MVG G +L++ + A + R + W+ Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 LK AL+SLPLPWIA + GWF+ E GRQPW I +LPT+ + S+L+TG L SLI ++ Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 TL L+ E+YLM ++ARLGPS++ + + +Q Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHTGRYHFEQ 515 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 313/513 (61%), Positives = 407/513 (79%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D+++LSR QFALTA+YHFLFVPLTLG+ FLLAIMET+YV++GK IY+DMT+FWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFALGVATGLTMEFQFGTNWS+YS+YVGDIFGAPLA+E LMAFFLESTFVGLFFFGW R Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L K QH+ VTWLVA GSNLSALWIL ANGWMQ P + F+ +T+RMEM SFSELV NPV+ Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 QVKFVHTV +GYVTGAMFI+ ISAWY+L+GR+ A RSFAI + FG A++ + LGD Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S YE+ VQ KLAA+E EW+T+PAPA F + P+Q++E N FA++IP LGI+AT S+ Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D PV GLK LM + R++ G A+ L++++ G+ + V F ++ DLGYG+LL RY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + + Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I G Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 LYTLFL+AE++LM K+ARLGPS++++ + +Q Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 466 bits (1199), Expect = e-130, Method: Composition-based stats. Identities = 263/507 (51%), Positives = 349/507 (68%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 V++LSR QFA+TA+YHF+F PLT+GL FLL IME++YV+TGK I+R MT FWG LFGINF Sbjct: 21 VVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVLFGINF 80 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ MEF+FG NWS+YS+YVGDIFGAPLA+E LMAFFLE+TF+GLFF GW RL+K Sbjct: 81 AMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGWNRLSK 140 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 QHL+ TWLVA GSN SALWIL ANGWMQ P GA F+ DT+RME+ F ++FNPV+Q K Sbjct: 141 VQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNPVAQAK 200 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 FVHTV AGYV GA+F+M+ISA+YLLRG+ +A RSFA+ + FG L+ + + LGD S Y Sbjct: 201 FVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLGDESGY 260 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 ++ Q +KLAA+E W+TE APA F P Q RN +A+KIP L+G++AT SLD+P Sbjct: 261 AASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATRSLDEP 320 Query: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363 +PG+ L+ R++ G++A+ +Q I + + F DLG+G+LL RY D Sbjct: 321 IPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLKRYRDD 380 Query: 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423 + + T Q A +P+V P+FW+FRIM G L+ +A + + RW L Sbjct: 381 IGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQEKRWFL 440 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYT 483 +ALW+LPLPWIAIE GWF+ E+GRQPWA++ +LPT+ A S L ++ +L+ LYT Sbjct: 441 SLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGFTALYT 500 Query: 484 LFLIAEVYLMQKYARLGPSAMQSEQPT 510 L+ + L K GP + P Sbjct: 501 TLLVIAIKLSLKTINKGPEVLFPPMPP 527 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 254/519 (48%), Positives = 345/519 (66%), Gaps = 8/519 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +V+DLSR+QFALTALYHF+FVPLTLGL F+LA MET+YVVTG+ IY+DM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATG+TMEF+FGTNWS YS++ GD+FG PLA+E LMAFF+ESTFVGL FFGW RL+ Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+LVA GSNLSALWIL AN M P GAHFD +T+RM+ SF LVFNP +Q Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KFVHT +AGYV+ AMF+M ISA+YLLRG+ R A RSF + ++FG ++ + + LGD Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAP-APFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AA+EG W T P P+ + A P+ ++ N F + +P +L L TH+ D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +P+ G+ L PR++ G A ++ + + L F E D+GYG+L +R+A Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSD-ADLTLFTQHEQDMGYGLLAARHA 365 Query: 362 P--DMNHVTAAQYQAAMR----GAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 P D+ ++ Q ++ +P V FWSFR MV + I+ +L+ + Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 ++ ++ +LK+ +WS+PLP +A E GW E GRQPW + LPT+ + S+ + FSL Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 I V LY++F+ AE+YLM K+ARLGP E Q Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGPEHDSMEPHAQHDA 524 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 205/515 (39%), Positives = 286/515 (55%), Gaps = 16/515 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++ LSR+QF +TA YHFLFVPLTLGL ++AI++TIY+ T Y ++ F KLF I Sbjct: 1 MDLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATGLTMEF+FGTNW YS VGDIFGAPLA+E LMAFFLESTF+GLF FG R+ Sbjct: 61 NFAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD--IDTLRMEMTSFSELVFNPV 179 + H W+VA GS LSALWIL AN WMQ P G ++ +T+F E N Sbjct: 121 SDVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S ++F+H V AGY+ G F+M + A+YLL+G+ +A +F + I + GD Sbjct: 181 SIIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 Y+V+ QP+K+A MEG+W+TE A ++ +Q+++ LKIP LL IL+ H Sbjct: 241 IHGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHD 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + G+K+L+ E + Q R P + Q + LE + + Sbjct: 300 PNAEFKGIKDLVKEYQQKAQE------------ASARIPVLEQKLKELEATNASQEEIQK 347 Query: 360 YAPDMNHV-TAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 D+ + A+ +P VA VF +F +MV G V++ L+ +G + Sbjct: 348 VKDDLAMAKSQAKAYNITFNDLPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 ++ L L S+PLP+IA GW E GRQPW +Q +L T S T + FS+I Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + +YTL I Y M K + GP +SE + Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKSEPIPPYE 502 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 195/512 (38%), Positives = 274/512 (53%), Gaps = 22/512 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++DLSR+QFA TA+ HF+FVPLTLGL +AI++TI T Y + F KLF + Sbjct: 1 MDLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA GVATGLTMEF+FGTNW YS +VGDIFGAPLA+E LMAFFLESTF+G+F FG R+ Sbjct: 61 NFAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRI 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHF--DIDTLRMEMTSFSELVFNPV 179 + H W+VA GSNLSALWIL AN WMQ P G +R E+T+F E V N Sbjct: 121 SDGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKIVQTPQGIRAELTNFWEAVINHT 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + ++ +HTV AG +T F+M + A++LLR + ++A + +F + + + +GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 ++ + VA+ QP+KLA MEG+W TE PA V + +Q ++ ++IP LL L+ H+ Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTE-QPASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 D V G+ +L+ + Q ++ N P + Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDKI--------------- 344 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 + A+ +P + VF F IMVG G V L L +G + + Sbjct: 345 ----VADKAYAKAYNISLKDLPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 + LK L+S+PLP+IA E GW E GRQPW + +L T A S +T + FS++ V Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 +Y L V M K + Sbjct: 461 TIYILLFYVYVTTMIKKVKEYEDTEAPSTAPA 492 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 215/511 (42%), Positives = 333/511 (65%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 ++++LSR+QFALTAL+HFLFVPLTLGL ++L IM ++YV TG IY+DMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG+T+EF+FG NW+++S +G F LA+E + AF LE+T GLFFF W ++ Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+L+A G++LS + IL AN WMQ PT F+ + +E+ S L N ++Q+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H G++TG++F+M +SA+Y+L GR+ A RSFA+G FG + + GD + Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+ +P K+AA+E +WQT+ PA + ++A+P Q +++N F + IP L ++ATHSL Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 VPG LM R++ G +A+ M+++ + P + + DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + + T A+ +AA R IP +A FWSFR M G L+LL+++ R + QHR Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 L+ AL+++PLP++A E GW + E GRQPW++ +ILPT+ + S ++ + SL+ + Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + + E++LM KYAR GPS++++ + ++ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLETGRYYFER 516 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 427 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 206/522 (39%), Positives = 306/522 (58%), Gaps = 23/522 (4%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + SR QFALTA+YH+LFVPLTLGL ++AI+ETIY GK ++ +FW KLFGINFA Sbjct: 9 VSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINFA 68 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++K Sbjct: 69 IGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSKG 128 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 HL TWL G++LSA+WIL AN WMQ P G F+ DT+R EMT F LVF+ + KF Sbjct: 129 FHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINKF 188 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRG--RERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 HT+ + + G++F + + YLLR + ++ AL++ I + FG A + T GD+SA Sbjct: 189 WHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTSA 248 Query: 243 YEVAQVQPVKLAAMEGEWQTE----------PAPAPFHVVAW-------PEQDQERNAFA 285 Y VAQ QP+KLAAMEG + + P + P+ D+E F Sbjct: 249 YNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLFN 308 Query: 286 LKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFR 345 + +P +L +L T + VPG+ N++ Y + G A + + +G R L + Sbjct: 309 VSVPRVLSVLGTRNPSGYVPGINNILEGGYVKA-DGTTAIPVDSMMQRGRRAIMALNDYS 367 Query: 346 GLE--GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLV 403 + GD+ + + Y +P + ++SFRIMVG G L +L+ Sbjct: 368 KAKQAGDMEAALQHKSVIDENFPYFGYSYIQHKNDIVPPIGLTYYSFRIMVGLGMLFILL 427 Query: 404 MLIALVQTLRG-KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 L+A + + + K + RW +A+ +PL W+A ++GW + E GRQPW IQD+LP +A Sbjct: 428 FLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPWTIQDLLPVQAA 487 Query: 463 HSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAM 504 S L G + + + + L++ L+AE+ +M+K + GP Sbjct: 488 VSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPETE 529 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 238/572 (41%), Positives = 331/572 (57%), Gaps = 63/572 (11%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 +DL+R QF LTA +HFLFVPLTLGL ++L ME +Y+ TGK +Y+DM +FWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 LG+ TGLTMEF+FGTNWS+YS VGDIFG PLA+E L AF LESTF GLFFFGW +L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 QHLL T+ +A GS+ SAL IL ANG+MQ+P G+ F T+RME S +L N +Q F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H + AGY T A+F++ ISA+YL+RGR+ A RS AIG FG + I + GD++ + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 +VQP+K+AA+E EW T APA F+ VA P Q +++N F + IPA+LG++ATHS D + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 PGLKNL------------------------------MAETYPRLQRGRMAWLLMQEISQG 334 PG+K + + + + I +G Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIKEG 375 Query: 335 NREPHVLQAFR-------------------GLEGDLGYGMLLSRYAPDMNHVT------- 368 L +R + +G+G +L + A + V Sbjct: 376 GLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATIAK 435 Query: 369 ----AAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH---RW 421 +A +P VA VFWSFRIMV G + ++++ L+ R + + R+ Sbjct: 436 AANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFSRF 495 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 +L++ +WS+PLP+IA AGW++TE GRQPW + D LPT + SALT + S+ + + Sbjct: 496 ILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFFLI 555 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 T V+LM KYARLGPS++ + + +Q Sbjct: 556 DTALFAVMVFLMFKYARLGPSSLGTGKYYFEQ 587 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 213/510 (41%), Positives = 307/510 (60%), Gaps = 14/510 (2%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 ID SR QFALTA+YH+LFVPLTLGL ++ I+ET Y T K +++ + FW KLFGINF Sbjct: 35 TIDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQKLFGINF 94 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW++++ Sbjct: 95 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFFGWKKVSA 154 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G+ +SA WIL AN WMQYP G F+ DT+R EM SF ++ +P + K Sbjct: 155 GFHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVALSPFAVDK 214 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F HTV + ++ GA+F++ +S+WYLL+GRE+ +A++S IG++ G A + GD+SAY Sbjct: 215 FFHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAALTGDNSAY 274 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQ------DQERNAFALKIPALLGILAT 297 +VAQVQP+KLAAME + + V P + + + + +P L +LAT Sbjct: 275 QVAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPKALSVLAT 334 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 H D VPG+ NL+ + G + +++ +G LQ +R + D Sbjct: 335 HDFDGYVPGINNLIDGYVK--EDGTKEPSVAEKMQRGRMAITALQQYRAGKKDEAT---- 388 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + D Y + +P + FWSFR+MVG G L +L LI+ + R I Sbjct: 389 RKTLTDNIKYFGYGYVKSADQIVPNIPLNFWSFRVMVGLGILFILFFLISGHVSWRKDIS 448 Query: 418 Q--HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 + RW+ A+ +PL ++A EAGW + E GRQPW IQD+LPT+ A S L G + + Sbjct: 449 EKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDMLPTWVAVSDLNAGSVMITF 508 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 + + L+T L E+ ++ K + G A Sbjct: 509 FLFLALFTTMLAVEINILFKQIKKGMEAPA 538 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 214/504 (42%), Positives = 302/504 (59%), Gaps = 12/504 (2%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 +D SR QFALTA+YH+LFVPLTLGL ++ IMET Y T K +R +FW +LFGINF Sbjct: 12 TVDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINF 71 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+ESTFV + FFGW +++ Sbjct: 72 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSA 131 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL TWL G+ LSA WIL AN WMQYP G F+ +T+R EMTSF ++ +P + K Sbjct: 132 GFHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDK 191 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F HTV + +V GA F + +S WYLLR R +A +S IGS+ G +A + G SAY Sbjct: 192 FTHTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAY 251 Query: 244 EVAQVQPVKLAAMEGEWQTE-----PAPAPFHVVAWPE-QDQERNAFALKIPALLGILAT 297 VAQ QP+KLAAME ++ A + + P+ ++ + +P +L ILAT Sbjct: 252 MVAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILAT 311 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 S VPG+++++ G L ++ +G + L+ +R + +L Sbjct: 312 KSTTGYVPGVRDIIKGY--TKADGTKEPSLKEKQERGKKAIQALKDYRAGKDKESNEKIL 369 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 Y +P + FW+FRIMVG G L +LV + L + I Sbjct: 370 DHDM----KYFGYGYIKDANQLVPFIPINFWAFRIMVGLGGLFILVFAVMLFLLYKKDIT 425 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 + RW+ + + +PL +IA E+GW + EFGRQPW IQD+LPT++A S L++G +AF+ + Sbjct: 426 RPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDLSSGGIAFTFFL 485 Query: 478 IVGLYTLFLIAEVYLMQKYARLGP 501 + L+T L AEV +M K + GP Sbjct: 486 FLVLFTAMLTAEVSIMCKQIKKGP 509 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 226/511 (44%), Positives = 309/511 (60%), Gaps = 9/511 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL + AIMETIY TG ++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ LSALWIL AN WMQYP G HF+ DT+R EM F + +PV+ Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++G++ GA+F++ IS WYLL+ R AL S + ++FG +A I + GD SA Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAW------PEQDQERNAFALKIPALLGILA 296 Y+VAQ QP+KLAAMEG ++ + +Q F +K P LL LA Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNGVGLVGIGILNPAKTSYLDNQNAFIFDIKFPKLLSFLA 307 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG--LEGDLGYG 354 ++ VPG+ NL+ Y +G +A ++I +G L +R + D Sbjct: 308 ERDINAYVPGIVNLIEGGY-TTNKGTVALSAKEKIEKGKAAIKALADYRKAVKDKDTAAA 366 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 + Y IP V F+SFR+MV G +L+ +I L+ +G Sbjct: 367 GQYRVTLEENFPYFGYGYIKDPAELIPHVGLTFYSFRVMVILGCFFILLFIITLIWDKKG 426 Query: 415 KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFS 474 KI RW+ + LWS+PL +IA +AGW + E GRQPWAIQDILPT ++ S L + + Sbjct: 427 KIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQPWAIQDILPTSASISKLNPSSVQTT 486 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 + + L+T+ LIAE+ +M K + GP A Sbjct: 487 FYLFLILFTILLIAEIGIMVKAIKKGPEAAA 517 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 180/510 (35%), Positives = 260/510 (50%), Gaps = 59/510 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + L+R QFA T L+HFLFVP+++GL+F++A+MET+Y+V +Y M +FWG LF I Sbjct: 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFF+ES F+GL+ FGW RL Sbjct: 61 NFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H L WLV+FG+ +S+ WIL AN +MQ P G F I R EM F L+ NP Sbjct: 121 PKKIHALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLW 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 V+F H + TGA FI +SA+ LL+ +E +SF + + G A +G G Sbjct: 179 VEFPHVIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A + + QP+K+AA EG W+ PA + A + E+++ +K+P L LA Sbjct: 239 AEHLMESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFS 298 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V G+K L AE + +G+ P V F +G G+ Sbjct: 299 GSVKGMKTLQAEYE-------------KIYGKGDYIPPVKTTFWSFRIMVGAGV------ 339 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 +++L L L R K++ +W Sbjct: 340 -------------------------------------VMILAALGGLWLNRRKKLENSKW 362 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVG 480 L++ + + P++A AGW MTE GRQPW + ++ T + S +T G L FS+I Sbjct: 363 YLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGV 422 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +Y + V+L + + G Sbjct: 423 MYMILGALLVFLFIREIKKGAEHDNHHDVP 452 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 221/505 (43%), Positives = 310/505 (61%), Gaps = 15/505 (2%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +ID SR QFALTA+YH+LFVPLTLGL ++ +MET YV TGK +++ +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLA+E ++AFF+E+TF+ + FFGW +++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL TWL G+ +SA WIL AN WMQYP G F+ +T+R EM F+ + +P++ Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 KF HTV++ ++ GA+F++ IS WYLLR R++ AL S + + G A + T GD S Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +VA+VQP+K+AA EG PF + LKIP +L ILATH +D Sbjct: 248 VQVAKVQPMKMAAAEGL-HDGGNGVPFTIAG-----------DLKIPKMLSILATHDIDG 295 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--GDLGYGMLLSRY 360 VPG+ NL+ Y + G A ++I +G L AFR GD + Sbjct: 296 YVPGINNLLEGGYQ-MPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + Y +P V FWSFRIMVG G +L +I L+ + + K+ R Sbjct: 355 LDENVKYFGYGYIKDPAHLVPNVGLTFWSFRIMVGLGGYFILFFIIVLIVSKKEKLADMR 414 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W+ ++ALW++PL +I +AGW + E GRQPWAIQD+LP +A S L TG + + + + Sbjct: 415 WLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFIFLL 474 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQ 505 L+T+ L AE+ +M K + GP ++ Sbjct: 475 LFTVLLFAEIGIMLKAIKKGPEGIK 499 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 199/513 (38%), Positives = 283/513 (55%), Gaps = 67/513 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR+QFA+T YHFLFVPLT+GLI L+A MET +V T +YR M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLA+EAL+AFFLESTF+G++ FG + Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++ W+VA G+N+SALWI+ ANG+MQ P G + R+E+ +F E+V NP + Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVG--YIERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 FVHTV++ Y+ GA F+MA+SAW+LLR + +SF G + G +A T +G Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGHK 256 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 SA A++QP K AA+E W+T PFH+V P+ Sbjct: 257 SASFAAKMQPAKGAALEAVWET-KESLPFHIVQIPD------------------------ 291 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 P+ +R + +L + ++ Sbjct: 292 ---------------PKNERNIVEFLTIPKLGSYFYTHS--------------------- 315 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + + P V VF+SFR+MV G + + + K+ + + Sbjct: 316 ----FDGKVVGFDQIPKDERPNVNIVFYSFRLMVALGLYFVALFWYGFYLYRKNKLVESQ 371 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 LK+ ++S+ LP++AI AGW + E GRQPW + ++ T A S ++ Q+ FSL+ +V Sbjct: 372 RFLKLVMYSVLLPYVAINAGWVVAEVGRQPWTVYGLMRTAEAVSPISLSQIIFSLVSLVL 431 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 YT+ LIA+VYLM KYA+ GP + + + Q Sbjct: 432 FYTILLIADVYLMLKYAKKGPYTSAATKGGEIQ 464 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 206/514 (40%), Positives = 276/514 (53%), Gaps = 60/514 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+RWQF +T++YHFLFVPLTLGL L+AIMETIYV TG Y++M RFWG+LF I Sbjct: 1 MDALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EF FG NWS YS +VGDIFGAPLA+EAL AFFLESTF+GL+ FGW++L Sbjct: 61 NFAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H WLVAF SNLSA WIL AN +MQ P G F + R EMT F L+ NP Sbjct: 121 SPALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F HTV+AG+VT A F+M ISA++LLR + RSF + + G + + +G Sbjct: 179 YQFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP+K+AA E W + PAP +VA +Q+ ++N +KIPAL LA +S Sbjct: 239 GQHLVATQPMKMAAAEALWDS-ADPAPLALVALVDQENQQNNLEIKIPALTSFLAYNSFR 297 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GLK L A ++ GN P V F Sbjct: 298 GEVKGLKELQA-------------AAAEQYGPGNYIPPVAPVFWSFR------------- 331 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 +M+ G L+L+ L +L +G ++ Sbjct: 332 ------------------------------LMIAAGLWLILLSLYSLYLWRKGLLESRPL 361 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVG 480 VLK LWS+P+P++A AGWF+ E GR PW + + +A S ++ + +L+ Sbjct: 362 VLKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTTLVAFTL 421 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 LY L + +VYL+ KYAR G G Sbjct: 422 LYGLLAVVDVYLLAKYARQGVVEQPPAGKMHPSG 455 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 191/509 (37%), Positives = 265/509 (52%), Gaps = 47/509 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI----YRDMTRFWGK 57 D + L+R QFALTA+YHFLFVP+TLGL LLAI+ T + Y + F+ Sbjct: 1 MDAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 LF INFA GV G+ +EF+FGTNWS YS VGDIFGAPLA+EA+ AFFLES F+G+ FG Sbjct: 61 LFAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 R++ + TW+VA G+NLSALWIL AN W Q P G F ++ + + SF + V N Sbjct: 121 RDRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTPKG--FYLEGGKAYLASFFDAVVN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 + +FVH +AG +TGA+F+ ISA+Y+L+ + +VA SF I G +A + + Sbjct: 179 YSTPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIA 238 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD Y+VA+ QP+KLA ME +W+TE V ++IP LL ILA Sbjct: 239 GDLHGYQVARTQPLKLAMMEDKWETESGAGLEIV------------PGIEIPKLLSILAY 286 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 H D V G+K+L+ + +G+ L Sbjct: 287 HDPDAKVYGIKDLVQTFQ-----------------------------KIAKGEEVGEDEL 317 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 D Q IP FWS R MV G + + + T++ I+ Sbjct: 318 PELWLDPRQFAGRQSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIE 377 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 Q RW+LK+ +S+PLP +A GW + E GRQPW + IL T A S L GQ+ S+I+ Sbjct: 378 QRRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIIL 437 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQS 506 +Y + + + LM + GP + Sbjct: 438 FSSIYFIVFLIFLGLMVQKVIKGPKRPEE 466 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 167/538 (31%), Positives = 249/538 (46%), Gaps = 82/538 (15%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+ VPLT+GL L+A+M+T++VVTGK + +T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL WLVA G N SA +I+ AN +MQ+P GA ++ +T R E+TS L+ N + Sbjct: 121 PKLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTAL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLR--------------GRERNVALRSFA----IG 223 F H V ++T F+ + W+++R + A F + Sbjct: 181 AAFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKHEETARTMFRPVTILA 240 Query: 224 SVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNA 283 + IG GD + + QP+K+A+ E TE + + + E Sbjct: 241 LWVMVASGIGLAITGDIQGKLMFEQQPMKMASAESLCHTETGADFSILTVGTQNNCESIT 300 Query: 284 FALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQA 343 +KIP L LA + D V G+ + A + GN +P++ Sbjct: 301 QLIKIPGLTSFLADGTFDSTVEGVTEIQARYE-------------EMYGPGNYKPNLFVT 347 Query: 344 FRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLV 403 + +G + L+ Sbjct: 348 YWTFRAM-------------------------------------------IGWAAGSALL 364 Query: 404 MLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI------- 456 ++ L T G++ +W +++ +P P++ AGW TE GRQPW + Sbjct: 365 AVVGLWMTRGGRVPDKKWFGWLSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPNPTGVDMI 424 Query: 457 -LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 L S + + SLI +Y + L+++Y GP + P Sbjct: 425 RLTVDQGVSNHSPWTVWVSLITFTVVYGALAVVWFTLIRRYTVEGPLEHDAHPPGDDH 482 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 180/530 (33%), Positives = 262/530 (49%), Gaps = 50/530 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D ++RWQF +T +YHF FVP+T+ L L+A+M+T+++ T Y +T+F+GKLF I Sbjct: 1 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTFVGL+ FGW++L Sbjct: 61 NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL +L A G+ +SA++IL AN WMQ P GA ++ T R E+T F ++ NPV + Sbjct: 121 PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE---------------RNVALRSFAIGSVF 226 FVH + + Y I AI+ W+L + + G+ Sbjct: 181 ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV 240 Query: 227 GTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAL 286 +A +G + GD + QP+K+AA E +Q F V+ +D +AL Sbjct: 241 LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNTSD---FSVLTIGNKDGSEEVWAL 297 Query: 287 KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 KIP +LG L V G+ L + R + Sbjct: 298 KIPGMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQ----------- 346 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 +V + A P V +W+FRIM+ G + L+ L+ Sbjct: 347 -------------------NVLRQKIDANGIKLEPNVPLSYWTFRIMITLGMIGGLIGLV 387 Query: 407 ALVQTLRGKIDQHRWVLKMALWSLP-LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA 465 L+ G+ + L + + +LP LP AI GW TE GRQPW + +LPT +A S Sbjct: 388 MLIAMRGGRNPKPHGWLTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTAAVSP 447 Query: 466 -LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 ++ G + FS I +Y + + EV L K + G + + +G Sbjct: 448 NVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELSTRDQPVTEG 497 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 196/515 (38%), Positives = 276/515 (53%), Gaps = 61/515 (11%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M++ +DL+R QFALT++YH+LFVP TLG+ +A +E YV TGK +Y+ M +FWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+EALMAFFLESTF+G++ FGW R Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L+K H LV VA G+NLSA WIL AN +MQ+P G F + R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 +F H V+ G +T + IMAISAW+LLR RS G V + G Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALAGHH 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + +VQP+K+AAME W+T+ PAPF +VA + ++N AL+IP L L +S Sbjct: 239 QGQYITKVQPMKMAAMEALWETQ-DPAPFSLVANIDTKAQKNTGALEIPGGLSFLTQNSF 297 Query: 301 -DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 V G+K+L A++ + GN P V F + Sbjct: 298 TSGKVEGIKDLQAKSEA-------------QYGPGNYIPDVPAIFWTFRVMV-------- 336 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 GSL+LLV + L+ + K+ ++ Sbjct: 337 -----------------------------------AAGSLMLLVAFVGLILNAKDKLVEN 361 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMI 478 R LK+ W LPLP+IA GWF+ E GRQPW + + T S ++T ++ ++I Sbjct: 362 RTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTTIIGF 421 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +Y + IA +YL ++ + GP S +++ Sbjct: 422 TLVYIVAAIAAIYLAVEHIKKGPDGNPSHDVVEKE 456 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 179/518 (34%), Positives = 263/518 (50%), Gaps = 52/518 (10%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D++D++RWQF +T +YHFLFVPLT+GL L+A+MET ++ T + + + +F+GKL I Sbjct: 1 MDILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+ WLV G+ SA +IL AN WMQ+P G ++ DT R E+T F ++ N V Sbjct: 121 PRKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLG 238 + F H ++A Y+T A FI+ ISAW R+R++ +G+ +A +G G Sbjct: 181 ITFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAP-APFHVVAWPEQDQERNAFALKIPALLGILAT 297 D + VQP+K+AA E +QT+ APF V D + ++L +P +L LA Sbjct: 241 DIQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAE 300 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 D V G+ +L AE + A S G+ P++ + +G G L+ Sbjct: 301 GDTDATVEGIDDLRAEYQETYGQDPGAAY----YSPGDYTPYIPVTYWSFRLMIGLGALM 356 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + A + +T R P V Sbjct: 357 AAGAALVLWLTRKGRAPTARWFAPMV---------------------------------- 382 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLI 476 L L +A GW TE GRQPWA+ ++ T S ++ + S++ Sbjct: 383 ---------LSLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 ++ LY + + EV L+ KY R G + +G Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKGADPFEEPPDPTLRG 471 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 144/513 (28%), Positives = 227/513 (44%), Gaps = 67/513 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+R QFA T +H +F L++GL +A++E ++ TGK Y+ + FW K+F + Sbjct: 152 FSALDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAV 211 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M +QFGTNWS +S++ G + G L E + AFFLE+ F+G+ FGW R+ Sbjct: 212 AFGMGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRV 271 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H T +VA G+ +S WIL +N WMQ P G F+I ++ T + ++FNP Sbjct: 272 SPRAHFGATLMVAIGTLISTFWILASNSWMQTPQG--FEIVDGQVVPTDWFAIIFNPSFP 329 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H +A +V A+ + A +AW+LL+GR + F++ + +GD Sbjct: 330 YRLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQH 389 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAA+EG W+TEP ++ P+ + +A+ IP L ++ THS D Sbjct: 390 GINTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYAVSIPHLGSLILTHSWD 449 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GLK+ + P ++ +M + L G L Sbjct: 450 GEIRGLKSFPPQDRPNSTVVFWSFRIMVGLGLAMIGLAALAWLLRRRGRLYEAK------ 503 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R + G + +L Sbjct: 504 --------------------------WFHRFALAMGPTGFVSLLAG-------------- 523 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 W TE GRQPW + ++ T A S L+T Q++ SL+ V + Sbjct: 524 -------------------WVTTEVGRQPWVVYGVMRTSHAVSPLSTQQVSVSLMTFVVV 564 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 Y L VY M K R GP+ Sbjct: 565 YFLVFGTGVYYMLKLMRKGPALPGDTPDDAHDA 597 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 168/514 (32%), Positives = 269/514 (52%), Gaps = 58/514 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + ++RWQF +T +YHFLFVP+T+G+ F +AI ET +V T K +Y T+FWGK+F I Sbjct: 1 MDPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLAMEAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H WLV+ G+ LSA +I++AN +MQ+P G + D R EM ++ P++ Sbjct: 121 SPRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNM 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H + ++GA I++++L++ R+ V + G V + + + GD Sbjct: 181 WAYSHVIAGAILSGAAMFAGIASYFLMKKRDVEVFRPAVRFGLVGMLIGSLAVIVTGDLL 240 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A + VQP+K+AA E W T A F + D F++++P +L +AT S Sbjct: 241 AKVMTDVQPMKMAAAEALWDTTEG-ASFSLFTIGTLDGSSEVFSIRVPGVLSFMATESFS 299 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V G+ ++ A+ ++ G+ P + A+ +G Sbjct: 300 GTVEGINDVQAQFE-------------EQYGPGDYRPIIPVAYWMFRIMMG--------- 337 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 G ++LLV ++ L T +G++ + + Sbjct: 338 ----------------------------------AGFVMLLVSIVGLWLTRKGRLPESKT 363 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYS-AHSALTTGQLAFSLIMIVG 480 V ++A++++ P + AGW TE GRQPW + + T +++ G + SLI+ Sbjct: 364 VWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLIIFTL 423 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 LY + + EV L+ KY ++GP + Q + ++G Sbjct: 424 LYGILAVVEVGLVVKYVKIGPPSEQEALASIRRG 457 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 206/527 (39%), Positives = 307/527 (58%), Gaps = 29/527 (5%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +++ +R QFA+TAL+HF FVP TLG+ F++A ETIYV TGK ++++T+FW +FGI Sbjct: 4 YSMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLIFGI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+E ++AFFLE+TF + FFGW+R+ Sbjct: 64 NFAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGWKRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTG--AHFDIDTLRMEMTSFSELVFNPV 179 +K HL +WL+A GSNLSALWIL ANG+MQ+PT ++ID R+EMT F ++ PV Sbjct: 124 SKGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMITQPV 183 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 +QVKF+H V + Y A+F++ IS+ YLLRG+ ++ A +S + + FG +A I T +GD Sbjct: 184 AQVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAVIGD 243 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERN--------AFALKIPAL 291 AYEVA QP K+AA EG E AP + P+ RN AF +++P + Sbjct: 244 EHAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIELPGM 302 Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE--- 348 L +L ++ VPGLK+L+ W + ++G + L+A+ + Sbjct: 303 LSLLGKRDINAFVPGLKDLV-----NGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANG 357 Query: 349 ---GDLGYGMLLSRYAPDMN-------HVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGS 398 G + D+N + Y P VAPVF+SF IMV G Sbjct: 358 DKAGMEAAKAEFYKVVADVNGVKVTRADLMGYGYLTDPTKLYPPVAPVFYSFHIMVALGF 417 Query: 399 LLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILP 458 +L+ L+A V L+G + + V K+A+ S+PLPWI GW E GRQPW + +LP Sbjct: 418 WFILLFLLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVFGVLP 477 Query: 459 TYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 T + + + + + + + + + IAE+ ++ + GP Sbjct: 478 TSESVTPIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPKGAH 524 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 167/500 (33%), Positives = 263/500 (52%), Gaps = 55/500 (11%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + L+R QFA T ++HF FVP+T+G++FL+AI E+IYV TG Y+ +T+F+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+GV TG+ EFQFG NWS YS++VGD+FG LA+EAL+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL---RMEMTSFSELVFN 177 +NK H++ WLV+ G+ +SA WIL+AN +MQ+P G + + + + EM F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P +F H V GA I I++W +LR E + ++F + V + +G Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G S + + P+K+AA E ++ APF V+A +Q Q++ L++P +L LA Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + + G+K+L E + + + PHV + Sbjct: 301 DKFEGSLKGMKSLQKEMDEKYYPVVGKHI--------DYTPHVPTIYYSFR--------- 343 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 IM G +L+L+ L+ + + + Sbjct: 344 ----------------------------------IMSGSVGILILMALLGTIYSFKRTET 369 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 + RW L++ W+L + +A GW M E GRQP+ I ++ T S S + + FSL++ Sbjct: 370 KKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLFSLLV 429 Query: 478 IVGLYTLFLIAEVYLMQKYA 497 LYT+ I + Y+ +YA Sbjct: 430 FCVLYTILGITQ-YIAFRYA 448 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 165/559 (29%), Positives = 247/559 (44%), Gaps = 103/559 (18%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+ VPLT+GL ++AIM+T++ VTG + T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +V D+FGAPLA+E L+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL WL A G SA +I+ AN WMQ+P G +D + R M F ++ N + Sbjct: 121 PRKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE----------------------------- 212 F H + ++T F+ A+ W++ R Sbjct: 181 AAFPHVLAGAWLTAGTFVAAVGIWWMARNTWRAKKLREAIETGDTSGMPKTTSPSQIDAT 240 Query: 213 --------RNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP 264 R + ++ + GD A + + QP+K+A+ E + Sbjct: 241 PEDLERDARQLWRPVTRFSLWIIMISGVALFITGDLQAQIMFKQQPMKMASAESLCDSTT 300 Query: 265 APAPFHVVAWPEQDQERN-AFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRM 323 A APF V++ Q+ N ++IP +L LA H D P+ G+ L + L Sbjct: 301 AGAPFSVLSIGRQNNCDNVDHVVEIPGMLSFLADHRFDTPLQGVNQLQVQYQEAL----- 355 Query: 324 AWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQV 383 ++ N P++ + G Sbjct: 356 ------QMPGQNFAPNLFVTYWGFR----------------------------------- 374 Query: 384 APVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFM 443 M+ ++V L L T R ++ + R +AL +P P++A +GW Sbjct: 375 --------AMITWALGSVVVALGGLWLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIF 426 Query: 444 TEFGRQPWAIQD-----------ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYL 492 TE GRQPW + + S T + +LI LY + L Sbjct: 427 TEMGRQPWVVAPNWQDNLDPTRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFML 486 Query: 493 MQKYARLGPSAMQSEQPTQ 511 ++Y GP+ + P + Sbjct: 487 QRRYVIEGPATYDAIPPDE 505 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 173/511 (33%), Positives = 271/511 (53%), Gaps = 23/511 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D I LSR QFALTA YH++FVP ++G+ F++ ++ T+ +T + + +F+ K GI Sbjct: 1 MDPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F LGV TG+ MEF+FG NWS YS +VG IFG PL +E L AF LESTF+G+ FG RL Sbjct: 61 FFVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + + ++ V GS+LS LWIL AN W Q PTG R E+T F VFNP+ Sbjct: 121 PRAITWISSFFVFIGSSLSGLWILIANSWQQTPTGYII--QNGRAELTDFMGAVFNPLLV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL-QLGDS 240 ++ HT+ + +TGA + A+ A+YLL+ R VA + AIG V ++ + L G + Sbjct: 179 SQYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVVVLAISAVIQLYPTGHA 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 +A+ QP KLAA EG ++TE AP + ++ + A+ IP LL L+ Sbjct: 239 EGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGDW 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + V GL + + + ++ + L+ + Sbjct: 298 NAEVMGLHDAARYVWYEQVLNNPNFASEKDRKEF------------------IETLMKAH 339 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 D N A + + VA +F+++R+M+G G+L +L+ LI ++ L GK+ R Sbjct: 340 GVDPNAPDANEQMVKVLEEALPVAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGKLYDAR 399 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIV 479 W LK+ + ++PLPW+A EAGWF E GR PW + ++ T + S ++ + +LI V Sbjct: 400 WFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLITLIGFV 459 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +Y++ ++ ++K R GP ++ + Sbjct: 460 VVYSVLFYIWLHFVRKLIREGPEPVEGDVTA 490 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 74/528 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +D+SRWQF +T +YHF+FVPLT+GL +LA+M+T +VVT + +TRF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFF ESTF+GL+ FGW RL Sbjct: 61 NFAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+VA N SA +I+ AN +MQ+P GA ++ ++ R E+T F L+ N + Sbjct: 121 PRLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAV 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE---------RNVALRSFAIGSVFGTLAII 232 F H V +T F+ +SA+ ++R + R + + GS+ +A + Sbjct: 181 WAFQHAVAGALLTAGAFVAGVSAFLMVRAQRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALL 292 G GD + QP+K+A+ E T P + + + L +P +L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GILATHSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 LA + G+ +L A+ R G+ P++ + + Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERF-------------GPGDYRPNLFVTYWAFRAMI 347 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 G ++ +A L+ + T Sbjct: 348 GLLLVPVAFA-------------------------------------------LVTVWLT 364 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI--------LPTYSAH 463 RG+I RW + ++P P++A AGW TE GRQPW + + Sbjct: 365 RRGRIPHQRWYGWAGVLTIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRMTVQDGV 424 Query: 464 SALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 S + G + FSL+M +Y + LM++Y GP SE Sbjct: 425 SNHSAGMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQEHDSEPAPP 472 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 166/512 (32%), Positives = 254/512 (49%), Gaps = 59/512 (11%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSRWQFA T +YHFLFVP+T+GL ++AI++T +G Y + F+GKLF INF Sbjct: 6 TVLLSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINF 65 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ EFQFG NWS YS YVG+IFG PLA+E L+AFF+ESTF+G++ FG R+ + Sbjct: 66 AIGVVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPR 125 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL WLV+ G+ LSA +IL AN WMQ+P G D T + MT+F ++ N + V Sbjct: 126 RVHLASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVT 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRE-RNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 HT++A ++TG+ ++ IS W R E R V + + ++ + G Sbjct: 186 LFHTLLASFLTGSALVLGISLWQYHRSTETREVFAAGARVSLIVMLISALLMGLDGHIDG 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 +A+ QP+KLAA E + T + + ++ F++ IP +L +LAT + Sbjct: 246 QVIAETQPMKLAAGEALYNTSRGASESIL--TIGNLHDKPIFSIGIPHVLSLLATDHWNG 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 V G+ L A ++++ G+ P V + G Sbjct: 304 VVQGINQLQA-------------AMVRQYGPGSYIPPVALDYWSFRIMAG---------- 340 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 G++++L+ L +++Q RW Sbjct: 341 ---------------------------------IGAVIILIALWGGWLLYHHRLEQSRWF 367 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 K+ALW++PLP+IA GW TE GRQPW + +L T S L+ + +L+ LY Sbjct: 368 AKVALWTIPLPFIANTTGWIYTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTVLY 427 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 + + ++ LM +Y R + + G Sbjct: 428 GILAVVDISLMVRYGRRSLEPGADTETEHEVG 459 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 168/535 (31%), Positives = 257/535 (48%), Gaps = 72/535 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+RWQFA+T +YHF+ VPLT+GL L+A M+T +VVT + +T+F+GKL I Sbjct: 1 METLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG WS YS +VGD+FGAPLAMEAL AFF+ESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 +K HL WL+A +NLSA +IL AN WMQ+P G ++ T R EM S ++ N Sbjct: 121 SKKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE----------RNVALRSFAIGSVFGTLAI 231 F HT+ A ++ F+ I+ W+++R R+ + +G++ ++ Sbjct: 181 AAFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSG 240 Query: 232 IGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHV-VAWPEQDQERNAFALKIPA 290 IG GD + + QP K++A EG ++E A + V + + +P Sbjct: 241 IGVGISGDVQGRLMYEQQPGKMSAAEGLCESEEGAAFSLLTVGPWNPTCDDLTRVISVPG 300 Query: 291 LLGILATHSLDKP---VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGL 347 + L T P +PG+ ++ E R + + + P + + Sbjct: 301 VASFLGTGHFSGPESALPGVNDVQREMEARF------GATDEAGNPISYTPPLGITYWSF 354 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 +M+G + + L A Sbjct: 355 R-------------------------------------------LMIGLAAFSAALALWA 371 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD---------ILP 458 L T RG+ + W+ ++A+ ++P P++A GW TE GRQPW + +L Sbjct: 372 LWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPNPTGIDQVRLLT 431 Query: 459 TYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +A+ G + SLI+ LY + L+ +YA G + E P + Sbjct: 432 ERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYAIEGVPQVHDESPEARA 486 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 175/556 (31%), Positives = 262/556 (47%), Gaps = 91/556 (16%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +D++RWQF +T +YHFL VPLT+GL L+A+++T ++ K Y MT+FWGKLF I Sbjct: 1 MEALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF LGVATGL EFQFG WS YS +VGD+FGAPLAMEAL+AFF+ESTF+GL+ FGW++L Sbjct: 61 NFILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 HL+ W+ GS +SA +IL AN WMQ+P G R MT + N + Sbjct: 121 PAKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVGVTVV--DGRPRMTDAWAVFTNNTAL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR------------------------------ 211 V F HT+ F++ IS ++L + R Sbjct: 179 VAFPHTIFGALAVAGGFLLGISWYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPGR 238 Query: 212 ---ERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAP 268 + V +RS IG+V +A GT GD + + QP+K+AA E Q + + Sbjct: 239 DKTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNGTSFSV 298 Query: 269 FHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLM 328 + ++ A ++IP LL LA V G+ +L+ E + + Sbjct: 299 LSIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPEYQAKYGTNLPDNPIY 358 Query: 329 QEIS--QGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPV 386 + + P + + G Sbjct: 359 GDRAGQPIQYVPVMAVTYWGFR-------------------------------------- 380 Query: 387 FWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEF 446 +M+G G + L +A RG + + +W++++A++ + P+ A AGW TE Sbjct: 381 -----MMIGFGGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFTEL 435 Query: 447 GRQPWAIQD----------ILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 GRQP+ + + T +A S ++ G+L FSL+ V +Y + LI EV+L+ K Sbjct: 436 GRQPFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLLFK 495 Query: 496 YARLGPSAMQSEQPTQ 511 Y R G + E T Sbjct: 496 YVRGGVLSAMPELATP 511 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 179/503 (35%), Positives = 265/503 (52%), Gaps = 58/503 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGK--TIYRDMTRFWGKLF 59 DV++LSR+QFA T+++HF FV LT+GL FL+A+MET V +Y MT F+G LF Sbjct: 1 MDVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLF 60 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 INFA+GV TG+ EFQFG NWS YS +VG+IFG PLA+E LMAFFLESTF+GL++FG Sbjct: 61 LINFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKD 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 RL + L WLVA G+ +SA WI+ AN WM +P G +++ + +T F +VFN Sbjct: 121 RLKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVG--YEVVDGQARLTDFGAVVFNYK 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + + F H + +V F++ ISA++LLR ++ +V RS IG VF + + ++ G Sbjct: 179 AWLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGH 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + A + QP+K AAME +W+T +PAP+ +VA +Q+ N +L+IP + ILA +S Sbjct: 239 TEAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNS 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 L+ G+ L + + +G+ P V + + G LL Sbjct: 299 LEGRYEGINQLEEQYD-------------EAYGEGDYVPPVAWVYWSFRIMVAIGSLL-- 343 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 L + + L R +D Sbjct: 344 ---------------------------------------LATAFLGLFLWWRRRQGLDGT 364 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 RW L+ + +PLPWIA GW +TE GRQP+ + +L SA + G++ L+ + Sbjct: 365 RWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVGLW 424 Query: 480 GLYTLFLIAEVYLMQKYARLGPS 502 +Y + +VYL+ AR G Sbjct: 425 VVYLALIGLDVYLLTVTARAGIH 447 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 159/532 (29%), Positives = 248/532 (46%), Gaps = 76/532 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DVID++RWQF +T +YHF+FVPLT+GL L+A+M+T + VTGK + TRF+G + I Sbjct: 1 MDVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+E L+AFFLES F+GL+ FGW ++ Sbjct: 61 NFAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKI 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H W+VA +N+SA +I+ AN +MQ+P GA ++ +T R E+T L+ NP + Sbjct: 121 PGWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTAL 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN---VALRSFAIGSVFGTLAIIGTLQLG 238 F H V +T F++ I W+L+R ++ + + +G +A+I G Sbjct: 181 AAFPHAVAGSLLTAGTFVVGICGWWLIRASKQESHRMFRPALWMGWWTTVIALIAVAVTG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 D A + Q QP+K+A+ E TE P + D + +++P +L LA Sbjct: 241 DIQAKLMFQQQPMKMASAESLCHTETDPNFSILTIGTHNDCDSVIHLIEMPWVLPFLAEG 300 Query: 299 SLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + G+++L A GN P++ + Sbjct: 301 RFTGVTLEGVQDLQA-------------KAESLYGPGNYAPNLFVTYWSF---------- 337 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 R M+G L + I+ + +G+ Sbjct: 338 ---------------------------------RAMIGLMVGSLAIAFISWLLLRKGRTP 364 Query: 418 Q---HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI-------------LPTYS 461 RW +L +P+P++A AGW TE GRQPW + + Sbjct: 365 TGRIARWFAWGSLAVIPMPFLANSAGWIFTEMGRQPWVVHPNPESVGDPRTEMIRMTVDM 424 Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 S + +LI LY + + +L+++ +GP Q Sbjct: 425 GVSDHAPWVVWVTLIGFTLLYFILFVIWFWLIRRAVLIGPPHESGPVGDASQ 476 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 151/514 (29%), Positives = 232/514 (45%), Gaps = 68/514 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + IDL+R QFA T +H LF +T+GL LA++E +++ T +YRD+ FW K+F + Sbjct: 4 LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GV +GL M +QFGTNWS +S++ G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H T +VA G+ +S WIL++N WMQ P G R+ T + +VFNP Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQGFEII--DGRVIPTDWFAVVFNPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H +A +V A F+ + +AW+LLRGR+ + ++ L +GD Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPA-PAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP K+AA+EG W+ P P + P+ +ER +A++IP L ++ THSL Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSL 301 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 DK VP LK E P ++ +M + + + G L Sbjct: 302 DKQVPALKEFKPEDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTL--------- 352 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 + P + W G L+ +L Sbjct: 353 ----------------YNSRPFLYLALW-------MGPSGLIAILAGW------------ 377 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 F TE GRQPW + ++ T A S + Q++ +L++ V Sbjct: 378 ---------------------FTTEIGRQPWVVYGLMRTADASSGHSVAQMSITLVLFVV 416 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 +Y + + M + R GP A P G Sbjct: 417 VYFVLFGTGLGYMMRLVRKGPKAYVEHVPHGGPG 450 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 151/517 (29%), Positives = 243/517 (47%), Gaps = 70/517 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ L+R QFALT ++H+++ L++GL ++ I+E +Y+ T IY M +FW K+F + Sbjct: 1 MDVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ + FGW R+ Sbjct: 61 TFAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 + H T +V G++ SA+WI+ AN WMQ P G + + R E+T F E+VFNP Sbjct: 121 SPKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S ++ H ++ ++ GA +++ISA+YLL+ + + A +S IG + I GD Sbjct: 181 SMIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SS VA+ QP KLAAME +QTE P + ++++ +A++IP LL L+ Sbjct: 241 SSGKVVAKYQPTKLAAMEALYQTESG-VPLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGD 299 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + + GL + E +P + + LM + + + + Sbjct: 300 FNAEMKGLDQVNPEDWPNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYK----------- 348 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 + + W +MV + G+ Sbjct: 349 ------------------KTLENHRGILW---LMVFSAIYAQVANQAGWYSAETGR---- 383 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTGQLAFSLIMI 478 PW + +L S ++ Q+ S+IM Sbjct: 384 -----------------------------YPWLVYGLLRISEGLSKSVKANQVLGSIIMF 414 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAM-QSEQPTQQQG 514 + +Y L I VY++ + + GP + + T G Sbjct: 415 MCVYLLLFILFVYMLNEKVKHGPEEEIEDDSSTPYHG 451 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 163/516 (31%), Positives = 248/516 (48%), Gaps = 66/516 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ L+R+QFA+T +YHF FVP ++G F++AIME++YV T Y+ M +FWG +F + Sbjct: 1 MTILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +FA+GV TGL EFQFG NWS YS ++GDIFGAPLA+EAL++FF+ESTF+GL+ F W+++ Sbjct: 61 SFAVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 HL W+ +FGS SALWIL AN +MQ+P G R M +F L+ NP Sbjct: 121 KPGLHLFFIWMTSFGSLTSALWILTANSFMQHPVGYEIK--GGRAVMVNFGALLKNPQLW 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR-----ERNVALRSFAIGSVFGTLAIIGTLQ 236 +F H ++ + G + I ++A+ LL+ + + +S +G + + IG + Sbjct: 179 YEFGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIA 238 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 LGD+ + + QP+K AA E + T AP+ +V + + IP L IL+ Sbjct: 239 LGDAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILS 298 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 H V G+ L A+ + + + P V F G Sbjct: 299 YHKTTGAVTGMNELNAQYKKKYGKNL------------DYYPPVNTLFYSFRIMCAVGAW 346 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTL---R 413 + LV L+ L+ T + Sbjct: 347 -------------------------------------------IFLVSLVGLIMTREKSK 363 Query: 414 GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLA 472 + Q RW L + LP+I AGWF+TEFGR PW + + + S ++ G L Sbjct: 364 KPLAQRRWALWCIAITTFLPFIGNTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLL 423 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ 508 S I+ L+T I ++L+ R PS + Sbjct: 424 TSNIVYFVLFTTLAITLIWLIVLELRKDPSEAIEPK 459 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 158/516 (30%), Positives = 233/516 (45%), Gaps = 64/516 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + D + LSR QFALT +H F L++GL L I+E +++ TG Y RFW F Sbjct: 4 LTDPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFA 63 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INFA+G+ TG+ +EFQFGTNW +S +G+ FG L E MAF LE+ F + FGW+R Sbjct: 64 INFAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKR 123 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + H T +VAF ++LSA WIL AN WMQ PTG H + + + +F+P Sbjct: 124 VGPKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGGHI--ENGVFIVDDYLAAIFSPDL 181 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F+H +A + A+S +++ G+ L+SF I ++ + +GD Sbjct: 182 PFAFLHMHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGDQ 241 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 + E+A++QP K+A +E W+T P A +++VAWP+ + ERN+F+++IP +L +L TH Sbjct: 242 NGLEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVTH 301 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 S VPGLK E P + ++ M I + + +G L Sbjct: 302 SPTGTVPGLKEFPKEDRPPIIIPFYSFRFMVGIGFAMVGVALWTVWEWRKGGL------- 354 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 W FR L +++ Sbjct: 355 --------------------RPENAPGRVWLFRAWGAMALGGYLAVIL------------ 382 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 GW E GRQPW + ++ T HS LT GQL SL Sbjct: 383 ---------------------GWITREVGRQPWMLYGLIRTADGHSNLTVGQLWTSLAGF 421 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 V YT+ V M K + GP + P +G Sbjct: 422 VVAYTILGCVFVIFMAKLFKKGPDMEELPPPGHARG 457 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 178/555 (32%), Positives = 270/555 (48%), Gaps = 70/555 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + D +DL+RWQF +T +YHF+ VP T+G+ L+A+MET++ TGK + TRF+GKLF Sbjct: 8 LLDSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFL 67 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NFALGVATG+ EFQFG WS YS +VGDIFGAPLA EAL++FF+ESTF+G++ FGW + Sbjct: 68 VNFALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGK 127 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTS---FSELVFN 177 ++K H++V WLV G N S LWI+ AN WMQ P GA F+ +T R E+ F +V N Sbjct: 128 ISKKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTN 187 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLR---------GRERNVALRSFAIGSVFGT 228 + +H V + + A + IS W+++R R V G Sbjct: 188 STMWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIML 247 Query: 229 LAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAP--------APFHVVAWPEQDQE 280 A + T+ G + QP K+AA EG E P V+ + Sbjct: 248 AAGLLTVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGENS 307 Query: 281 RNAFALK------IPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG 334 + + + IP LLG +A +S + + G+ + T L+ + + + Sbjct: 308 GSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF----KDKAP 363 Query: 335 NREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMV 394 N + RG GY + P V PVFWSFR+M+ Sbjct: 364 NIDTTNTSGLRGKGDVAGY---------------------SWAKYAPSVLPVFWSFRLMM 402 Query: 395 GCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ 454 G G + + ++ L QT G++ R + +AL +LP+P++ + GW MTE GRQP+ + Sbjct: 403 GVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFIVY 462 Query: 455 D------------------ILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 + T S ++ + SL++ LY + I L+ + Sbjct: 463 PNQDAFNADMTVQNAGAGVYMLTGDGLSGVVSPVEFLISLVVFTLLYLVLGIIWFKLLVR 522 Query: 496 YARLGPSAMQSEQPT 510 Y++ G + S+ Sbjct: 523 YSKEGINTPASDGGP 537 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 211/416 (50%), Positives = 302/416 (72%) Query: 98 MEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA 157 +E LMAFFLESTFVGLFFFGW+RL+K +HLL T+ VAFGSN SALWIL ANGWMQ P + Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 HFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVAL 217 F+ +T+RME++SFSELV NPV+Q KF+H YV GA+F++ IS++Y+L+GR+ A Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQ 277 RSF++G+ FG +AII L +GD S YE+ + QP KLAAMEGE++T+PAPA ++ P Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 DQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNRE 337 + +N F++ IP GI+AT SLDK + GLK++ R++ G +A+ L++++ GN Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 PHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG 397 +AF+ ++ DLG+G+LL +Y P++ T Q Q A IP V P FW+FR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 SLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 L+L+++ A +Q +RGK++ R++L+ L+ LPLPWIAIE+GWF+ E+GRQPWAI ++L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 P ++SALTTG L F++ ++ GLYTLFL+ E+YLM KY RLGPSA+++ + +Q Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQ 416 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 168/510 (32%), Positives = 241/510 (47%), Gaps = 59/510 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DLSR+QFA T+++H+ FVP T+G ++AI++TI TG ++TRF+G LF I Sbjct: 7 FSALDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFI 66 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NW +SN+VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 67 NFAVGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKI 126 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + L W+VA G+ +SA WI+ AN WMQ+P G F+I R MT +V NP Sbjct: 127 PAWLSLASIWIVALGTTVSAFWIIIANAWMQHPVG--FEIKNGRAVMTDAWAIVTNPKGL 184 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H GA F++A+SA++L R SF + + + G + G + Sbjct: 185 EWFAHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQ 244 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPA-PFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K AA W+T P +VA P N F + +P L LA ++ Sbjct: 245 GQSAVRDQPMKYAAFSALWETPAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNF 304 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 GL L AE R GN P V + +G G L+ Sbjct: 305 TGKAKGLNELQAEYEAR-------------YGPGNYIPFVWPVYWAFRVMVGLGFLM--- 348 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 L+ LV + +GK+D Sbjct: 349 -------------------------------------LLVALVYVWRW---RQGKLDDPG 368 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 + + L P +A GW TE GRQPW +Q +L T A S L + SL+ Sbjct: 369 RLYPLLLAMPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWV 428 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 +Y + +V+L+ + AR G E P+ Sbjct: 429 VYLTLIGLDVFLLTRTARAGMHEPDVETPS 458 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 363 bits (932), Expect = 9e-99, Method: Composition-based stats. Identities = 131/503 (26%), Positives = 221/503 (43%), Gaps = 66/503 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + L+R QFA T +H +F ++GL LA++ +++ T Y + +W K+F + Sbjct: 43 FSAETLARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKKIFAV 102 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M +QFGTNWS +S+ G + G +A E L AFFLE+ F+G+ FG +R+ Sbjct: 103 AFGMGVVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFGRERV 162 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+ T +VAFG+ +SA WIL+ N WMQ P G + + + ++VFNP Sbjct: 163 GEKLHMFATAMVAFGTLMSATWILSVNSWMQTPAGFSI-AENGQFIPEDWWQIVFNPSFP 221 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH V+A ++T ++ + A+ A +LLR R A R F++ + + GD Sbjct: 222 YRLVHMVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMAMWMAAIVTPLQIYAGDMH 281 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+ AMEG +++ P AP + Q + + +AL+IP L ++ HSL+ Sbjct: 282 GLNTLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILKHSLN 341 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 P+ GL + + P + ++ +M + + + G L Sbjct: 342 APLDGLDTIPDDEEPPVAIVFYSFRVMVGLGFAMLGLGLWSLWARYRGTL---------- 391 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R + G + +L Sbjct: 392 ----------------------FTTPWLHRAAILMGPTGFIAVL---------------- 413 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 AGW TE GRQP+ + +L T + + + +A SL+ + + Sbjct: 414 -----------------AGWITTEVGRQPYTVYGLLRTSDSLAPVAAPAVATSLVAFIIV 456 Query: 482 YTLFLIAEVYLMQKYARLGPSAM 504 Y A Y + K P+ Sbjct: 457 YFFVFGAGTYYLLKMMNKRPATP 479 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 170/526 (32%), Positives = 244/526 (46%), Gaps = 81/526 (15%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFA T ++H+LF PLT+GL +L +E +++ T IY RFW K+FG+ Sbjct: 1 MDVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA E + AFFLES F+ L FGW R+ Sbjct: 61 NFALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT------LRMEMTSFSELV 175 H T +VA G S++WI AN W Q P G LR E+ F +V Sbjct: 121 GPKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMV 180 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 FNP + + +H + +V GA F+M+ISAWYLL+ R A +SF +F T++ L Sbjct: 181 FNPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQL 240 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 G A VA QP KLAAMEG + T+ AP ++ WP+ ++ + + IP +L ++ Sbjct: 241 ASGHFQAEGVAHHQPAKLAAMEGLYTTQKQ-APVYLFGWPDSQTKQVKYGIPIPGMLSLM 299 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 T ++ V GL L P V F+ + GM Sbjct: 300 VTGDSNQEVRGLDQLDPIW---------------------GTPPVWITFQAYHIMIAIGM 338 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 + V+ + F ++ + R Sbjct: 339 IFI------------------------VSCTYSCF------------LLYRGTLYETRWV 362 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQ---------DILPTYSAHS-A 465 + H + L +A ++A E GW E GRQPW + L T +A S A Sbjct: 363 LWYHVFALGLA-------FLANEMGWVSAEVGRQPWIVYPTLVDGLPTGGLRTSAALSEA 415 Query: 466 LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 + Q+ S+I +Y L + + L+ + GP E Sbjct: 416 VIAEQVLGSIIFFAIVYGLLFVLWITLLHQKISHGPDDHAKESGEH 461 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 168/511 (32%), Positives = 241/511 (47%), Gaps = 64/511 (12%) Query: 1 MWDVI-DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF 59 M D + +LSR QFA+TA++H L+ LT+ L L ++E +++ TG +Y RFW KL Sbjct: 1 MLDHVANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLL 60 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 +NFA+GV +G+ MEFQFGTNW+ +S Y G G L E MAF LE+ FVG+ GW Sbjct: 61 VLNFAVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWG 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 R+ + HL T +VA GS++SA WI+ AN WMQ P G ++E+T + +FNP Sbjct: 121 RVPRGVHLFATSMVALGSSISAFWIMVANSWMQTPAGYAVV--NGKIEVTDYLVAIFNPD 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 H +A TG I ISA+ L R R RSF I +A + LGD Sbjct: 179 MVWGVSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIALSVLVVAAPLQIWLGD 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 SS V + QP K AA+EG W T + A + ++AWP+Q +RN ++L++P +L +L T Sbjct: 239 SSGVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDWSLEVPGMLSVLGT 298 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 HSL V GL + E P + P + AFR + G MLL Sbjct: 299 HSLHGQVKGLTDFAREDQPPM------------------IPLLYYAFRAMAGIGLCFMLL 340 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + + A + +A V Sbjct: 341 AFWTAYALRKARGSLDALLARRKLLLAWV------------------------------- 369 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 +PLP++A+EAGW + E GRQPW + +L T A S + ++ S+ M Sbjct: 370 ----------LCIPLPYVAVEAGWIVREVGRQPWVVYGLLRTSQAASTVAPSAVSLSMAM 419 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ 508 Y + L+ L ++ R GP Sbjct: 420 FFAFYAVLLVTFFVLACRWLRKGPDLTSLPP 450 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 167/514 (32%), Positives = 258/514 (50%), Gaps = 68/514 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + L+R+QFA+T ++HF FVP T+G F++AIMET+YVVT Y+ MT+FWG + + Sbjct: 1 MTIETLARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ-- 119 +FA+GV TG+ EFQFG NWS YS +VGDIFGAPLA+EAL+AFF+ESTF+GL+ F W Sbjct: 61 SFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNK 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 +++K H+ WLV FGS +SA+WIL AN +MQ+P G +++ R +MT F L+ N Sbjct: 121 KISKKLHVTFIWLVVFGSLMSAMWILIANSFMQHPVG--YEVVNGRAQMTDFFALINNHQ 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE-----RNVALRSFAIGSVFGTLAIIGT 234 + +F H + G + I +SA+ LL+ E + + +S +G + L I Sbjct: 179 FRYEFGHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISV 238 Query: 235 LQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGI 294 + +GD + QP+K AAMEG+++ PA + V+AW + ++ F +KIP +L I Sbjct: 239 MGVGDLQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSI 298 Query: 295 LATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYG 354 L+ V G+ E L+ + Q N P V F G Sbjct: 299 LSYGKPSGSVKGMDTANKE-------------LVAKYGQDNYFPMVNLLFYGFRTM---- 341 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 G+++L V + L T Sbjct: 342 ---------------------------------------AAFGTMMLGVSALGLFLTRPK 362 Query: 415 K--IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQL 471 K + H+W+L + + P+++ GW +TE GR PW + + + S ++ L Sbjct: 363 KPILYDHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVSVASL 422 Query: 472 AFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 FS + L++ VYL+ + + GP + Sbjct: 423 LFSNTVYFLLFSCLGAMMVYLVIRELQKGPEHEE 456 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 180/504 (35%), Positives = 262/504 (51%), Gaps = 65/504 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGK 57 D + LSRWQFA+T +YHFLFVP+TLGL +A++ET YV T + ++ + RF+G Sbjct: 1 MDALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 LF INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+EAL AFFLESTF+G++ FG Sbjct: 61 LFVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W +L++ H L W+VAF SNLSA WIL AN +MQ+P G F + R EMT F LV N Sbjct: 121 WDKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVG--FAVRNGRAEMTDFFALVTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQ 236 P ++ HT+ + T ++A+SAW +L R ++ G+VF + T+ Sbjct: 179 PYVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMG 238 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 G A +AQV P+KL+++E W+TE PAPF +VA ++D +N F L +P + Sbjct: 239 SGHLQAQYIAQVNPMKLSSVEALWETE-DPAPFAIVADIDEDMHKNNFELTVPGAFSFML 297 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 ++ VPG+ + + ++ P V F Sbjct: 298 YNTPTGAVPGINQIQKDYS-------------EKYGPDEYRPDVTGLFW----------- 333 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 SFRIM+G G L++L+ L A + Sbjct: 334 --------------------------------SFRIMIGLGGLMILLGLAAAYFGFTNRP 361 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSL 475 LK+ W LPLP++A GW++ E GRQPW + + T A S LT + ++ Sbjct: 362 LACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVWLTM 421 Query: 476 IMIVGLYTLFLIAEVYLMQKYARL 499 LY + IA +++ ++ + Sbjct: 422 AGFTVLYLVLAIAALWIAMRFIKK 445 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 158/585 (27%), Positives = 242/585 (41%), Gaps = 129/585 (22%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSRWQF +T +YHF+FVPLT+GL L+A+M+T + VT K + TRF+G + + Sbjct: 16 LDTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLV 75 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ EFQFG NWS YS VGD+FG PLA+E L+AFF+ES F+G++ FGW R+ Sbjct: 76 NFAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRI 135 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H L W VA NLSA +I+ AN +MQ+P GA F+ +T R E+T L+ NP + Sbjct: 136 PTWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTAL 195 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV-------------------------- 215 F H V ++T F++ +S W+L++ Sbjct: 196 AAFPHAVAGSFLTAGTFVLGVSGWWLIKDARAKAKTATTTQDGLALDNAPAAEASASGTN 255 Query: 216 --------------------------ALRSFAIGSVFGT----LAIIGTLQLGDSSAYEV 245 G L+ IG GD A + Sbjct: 256 TAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGVFITGDIQAKLM 315 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK-PV 304 QP+K+A+ E TE P+ + + E LK P +L LA + Sbjct: 316 FVQQPMKMASAESLCHTETDPSFSILTIGTHNNCESVIHVLKAPFVLPFLAEGKFSGVTL 375 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 G+ +L + GN P++ + +G Sbjct: 376 QGVMDLQEKAEA-------------LYGPGNYSPNLFVTYWSFRAMIG------------ 410 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW--- 421 +MVG L + A + T +G++ + +W Sbjct: 411 ---------------------------LMVG----SLALAFFAWLFTRKGRLPKGKWATI 439 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDI-------------LPTYSAHSALTT 468 L ++P P++A +GW TE GRQPW I + S Sbjct: 440 FSWGCLAAIPFPFLANSSGWIFTEMGRQPWVIHPNPESVGDPRTESIRMLVDHGGSGHEP 499 Query: 469 GQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + +L+ +Y + + +L+++ GP A + + Sbjct: 500 WVVIVTLVGFTLIYGILAVVWFWLIRRVVLDGPPAESGPEAVASE 544 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 353 bits (907), Expect = 7e-96, Method: Composition-based stats. Identities = 156/523 (29%), Positives = 244/523 (46%), Gaps = 74/523 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +L+RWQF +T +YHF VPLT+GL L+A+M+T +G ++ T F+GK+ I Sbjct: 1 MEAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGVATG+ EFQFG NWS YS +VGDIFGAPLA EAL+AFFLESTF+GL+ FG RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEM---TSFSELVFNP 178 + H + WL+A G+ LS +IL AN +MQ PTGA + T R+E+ F ++F+ Sbjct: 121 SPRLHNMCIWLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFSE 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE--------RNVALRSFAIGSVFGTLA 230 S F HT+ A ++ + + W++ R R R + +G V ++ Sbjct: 181 TSLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLVS 240 Query: 231 IIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIP- 289 + G V +QP K AAM G ++ + V+A D + L P Sbjct: 241 SCIAIGSGHFMGQHVKDIQPAKAAAMMGVCESGESHD--LVIAMWTSDCDGPQLTLPFPG 298 Query: 290 ALLGILATHSLDKP---VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 L +AT+ + GL ++ AE + + + P++ AF Sbjct: 299 GLESFMATNHFSGKESFLKGLDDVNAELKAKYADVYGSDQ--------DYRPNLTVAFWS 350 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 + G G L L + + Sbjct: 351 FRAMM-------------------------------------------GIGFLGLAMSIF 367 Query: 407 ALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD------ILPTY 460 L KI++ + ++ L ++PLP++ GW +TE GRQPW + ++ Sbjct: 368 GLYSLRGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQ 427 Query: 461 SAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 ++++ G + S+ + LY+ + + L+++YA G Sbjct: 428 GLSNSVSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEGIDT 470 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 172/456 (37%), Positives = 242/456 (53%), Gaps = 14/456 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFA+TA +HF+F PLT+GL +L+ +M+T Y+ TG+ +Y+ M+RFW K+F I Sbjct: 1 MDVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA EA+ AFFLES F+G+ +G R+ Sbjct: 61 SFVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 +K + + +VA GS LSALWI+ AN W Q P G H R E+ F + N + Sbjct: 121 SKKVYWFSSLMVAVGSTLSALWIIIANSWQQTPAGYHIV--NGRAELIDFKAALLNASTV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +++HTV +TGA F++AISAWYLLR RE A +S +A + + +G Sbjct: 179 PRYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMH 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +VAQ QP KLAA+EG ++TE A + P++ F L IP L +LAT D Sbjct: 239 AVQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIPKALSLLATGDPD 297 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GLK E P + + + LM + + + +G L L + A Sbjct: 298 GEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRLFLKLA 357 Query: 362 ----PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCG----SLLLLVMLIALVQTLR 413 P + AA G P V+ R + G + +L +I V Sbjct: 358 LWSVPLPFIANEVGWIAAEVGRQP--WIVYKLLRTVDGISYTVPAWQILASIILFVLIYS 415 Query: 414 GKIDQHRWVLKMALWSLPLPWI-AIEAGWFMTEFGR 448 ++L+ L + P + A TE GR Sbjct: 416 LLFVVWFYLLRKKLAAGPEAFATANGVAKSGTEVGR 451 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 1/165 (0%) Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ 410 LG LS A +A P V F +F +MV G+L +L + + Sbjct: 282 LGIPKALSLLATGDPDGEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWL 341 Query: 411 TLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTG 469 +G + +R LK+ALWS+PLP+IA E GW E GRQPW + +L T S + Sbjct: 342 MSKGTLQDNRLFLKLALWSVPLPFIANEVGWIAAEVGRQPWIVYKLLRTVDGISYTVPAW 401 Query: 470 QLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 Q+ S+I+ V +Y+L + YL++K GP A + + G Sbjct: 402 QILASIILFVLIYSLLFVVWFYLLRKKLAAGPEAFATANGVAKSG 446 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 350 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 169/545 (31%), Positives = 254/545 (46%), Gaps = 76/545 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+D++RWQF +T +YHFL VPLT+GL L+A+M T++V TGK + MTRFWG+++ I Sbjct: 6 IDVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLI 65 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF LGVATGL EFQFG WS YS +VGD+FG+ LA+EAL+AFFLESTF+GL+ FGW R+ Sbjct: 66 NFVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRI 125 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL W GS +SA +I+ AN WMQ+P G D T R F ++ N + Sbjct: 126 PKELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTAL 185 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR---------ERNVALRSFAIGSVFGTLAII 232 F H V+A + ++ I W+L R + V RS +G A + Sbjct: 186 AAFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFV 245 Query: 233 GTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE--QDQERNAFALKIPA 290 GD + + QP+K+++ E +TE APAPF V+AW + ++ + ++ IP Sbjct: 246 LVALTGDWQGKLMYEQQPLKMSSAEALCETE-APAPFSVLAWSKLGSNECDDVHSITIPG 304 Query: 291 LLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG---NREPHVLQAFRGL 347 L+ LA VPG+ L E G + P + ++ Sbjct: 305 LVSFLAHGDFSSAVPGVNQLQEEYAAVYGETYPDDPSRFGALAGEEIDYTPLLAVSYWSF 364 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 + G G++ V A Sbjct: 365 RLMI-------------------------------------------GMGAVSAGVAAYA 381 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD----------IL 457 L T +G++ + + +L ++ P++A GW TE GRQP+ + Sbjct: 382 LWATRKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQTYF 441 Query: 458 PTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG-------PSAMQSEQP 509 T A S +T ++ SL ++ +Y + E++L+ ++ R G P Sbjct: 442 FTAQAVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRGVTTGDHAPDHPAPAPG 501 Query: 510 TQQQG 514 T +G Sbjct: 502 TPAEG 506 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 161/517 (31%), Positives = 226/517 (43%), Gaps = 65/517 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + + + LSR QFA+TA++H L+ LT G+ L I+E +++ T Y RFW +L+ Sbjct: 5 LSNTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYV 64 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NF +GVATGL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R Sbjct: 65 LNFGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDR 124 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + H L T LVA G+NLS WIL+AN W+Q P G F + + + + NP Sbjct: 125 VPPLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIFV--DGKFVVQDYFAAIANPFM 182 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F+H A T I ISAW +L GR+ RS + V + +G Sbjct: 183 VNSFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHL 242 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 SA +V+ QP KLAAME W+T PA PA + VVA P E+N + L IP L + Sbjct: 243 SAEQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSIPGALSYILEL 302 Query: 299 SL--DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 DKP+ GLK+ PR+ V + + G+ Sbjct: 303 KPQLDKPIQGLKDWAPVDRPRM---------------------VGLIYYSFRIMVAIGLF 341 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 + ++ W R V L L Sbjct: 342 FAALMAVTVLQWLRGKLKPEI-----ISQQKWLLRAWVFAAPLGYL-------------- 382 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLI 476 A+E GW + GRQPW + + T + S L G++ FSL Sbjct: 383 -------------------AVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEILFSLT 423 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + +Y +FLIA +Y + R GP + Sbjct: 424 GLSVMYIVFLIATLYFGSRIIRNGPDLTLPAPRGSEA 460 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 157/500 (31%), Positives = 240/500 (48%), Gaps = 64/500 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+RWQFA+ ++HF FVP+T+GL L+A++ T+ + + +TRF+ +F I+ Sbjct: 2 ALFLARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISM 61 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ +EFQFG NWS YS +VG+IFGAPLA+E L+AFFLESTF+GL+ FG RL Sbjct: 62 AVGVVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPP 121 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 HL WLV+ G+ LSA +IL AN WMQ+P G + + +T+F ++ N Sbjct: 122 RVHLATIWLVSIGTLLSAFFILAANAWMQHPVGYRV--ENGKAVLTNFWAVLGNSTLWWS 179 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERN----VALRSFAIGSVFGTLAIIGTLQLGD 239 F HTV A TG ++ I+ + R + ++ + + A I T GD Sbjct: 180 FAHTVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTAVSGD 239 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A + QP+K+AA E + T A F ++ + F +++P LL ++AT + Sbjct: 240 GQARLMDTQQPMKMAAAEALYDTTRG-ASFSLLTIGD-LSGNPIFQIRVPGLLSLIATLN 297 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + V G+ + R G+ P + + Sbjct: 298 PEGEVLGIHQIQQAEQAR-------------YGSGSYVPVIWLTYWSFR----------- 333 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 IMVG G LL+L+ L L + R + Sbjct: 334 --------------------------------IMVGAGILLVLLPLWILWRMRRRTGFEG 361 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 RW+ ++AL + LP +A AGW TE GRQPW + ++ T S S + +A +L V Sbjct: 362 RWLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSFV 421 Query: 480 GLYTLFLIAEVYLMQKYARL 499 +YT+ L+ + AR Sbjct: 422 AVYTILGFIAAVLIARAARR 441 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 347 bits (889), Expect = 9e-94, Method: Composition-based stats. Identities = 137/507 (27%), Positives = 214/507 (42%), Gaps = 67/507 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +DL+R QFA T +H +F +T+GL L ++E +++ TG+ +Y+D+ +W K+FG+ Sbjct: 4 ISALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKIFGV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGWSRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 HL T +VA G+ +SA WIL +N WMQ P G F+I + + ++FNP Sbjct: 124 GPGLHLFSTAMVALGTLISATWILASNSWMQTPQG--FEILDGVVVPVDWWAIIFNPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH +A ++ A+ + A AW++L+G++ ++ + +GD Sbjct: 182 YRLVHMGIAAFLATALIVGAAGAWHILKGQKTEATRTMLSMAMWMLVVVAPLQAVVGDLH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAAMEG W+ P + P+ + E FA+ IP L ++ THS D Sbjct: 242 GLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTHSWD 301 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 VP LK+ E P ++ +M + + G L R Sbjct: 302 GQVPALKDFPPEDRPNASIIFWSFRVMVGLGMLMIALGLWSLCLRYRGSLYSHQGFLRMT 361 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 G ++ +L T G+ Sbjct: 362 LW--------------------------------MGPAGVIAILAGWFTTEIGR------ 383 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 QPW + I+ T A S LA SL + + + Sbjct: 384 ---------------------------QPWVVYGIMRTADAVSNHDISSLAASLALFIIV 416 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQ 508 Y + + RL E Sbjct: 417 YFFVFGIGISYLMHLMRLPVQHRAPEP 443 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 144/516 (27%), Positives = 219/516 (42%), Gaps = 62/516 (12%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + + L+R QF A++H ++ PLT+GL +L ME +V T Y +FW KLF Sbjct: 4 LQNPEFLARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFL 63 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF +GV +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R Sbjct: 64 INFGVGVISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGR 123 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + HL T +VAFGS LSA WI+ AN WMQ P G + + +T++ + VFNP Sbjct: 124 VGPKMHLFATGMVAFGSTLSAFWIMVANSWMQTPAG--VKLVDGKFAITNWYDAVFNPDL 181 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F H A + + +SA+YLL+ R + +F + + + +GDS Sbjct: 182 PYGFGHMFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVISLFIVAPLQIFIGDS 241 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 + +A+ QP KLAA+E W T AP+ ++A P Q ++N +AL+IP L ++ T Sbjct: 242 AGSSLAETQPAKLAAIEAHWHTNKPGEGAPWALLAIPNQKDQKNDWALEIPDGLSMIVTK 301 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 ++ V GL + + P + A+ +M V AF Sbjct: 302 TMTGKVVGLDHFKPDDQPPVWIPFYAFRVMVAAG-------VFVAFMAFWT--------- 345 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 ++ R +++ W R + + + Sbjct: 346 ---------LWMLWRKRERMTAARISENKWLLRGWLLAVPAIYAAVEAGW---------- 386 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 E GRQPW + ++ T S L + +SL M Sbjct: 387 -----------------------MTREVGRQPWIVYGMMRTSQGVSNLPADTVLWSLAMY 423 Query: 479 VGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 + Y + + + R GPS Q G Sbjct: 424 MLFYGVIGVTAFVFAARMIRKGPSFEDPPAAPGQGG 459 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 183/507 (36%), Positives = 262/507 (51%), Gaps = 68/507 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA+T ++HF+FVPLTLGL ++A MET Y +TG + MTRFWGKLF I Sbjct: 1 MDTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFALGV TG+TMEFQFG NW+ YS YVGDIFGAPLA+EA +AFFLES F+GL+ FGW ++ Sbjct: 61 NFALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ HLL WLVA +NLS L IL AN WMQ P G + + R EMT F ++ NP Sbjct: 121 SQKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +KF H + A Y A F+M ISAW+LLR E + RSF ++FG + +GD S Sbjct: 179 IKFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLS 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAF-ALKIPALLGILATHSL 300 + EVA+VQP K AAME W+T+ A +++ P++ ERN+ A IP ++ +LA Sbjct: 239 SVEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPDEKNERNSLEAFSIPNMISLLAFRDA 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + V GLK+ E P + +++ +M + ++ +G Sbjct: 298 NAEVTGLKSFPRELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISFKG----------- 346 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 P+ +F + ++V L + + + G+ Sbjct: 347 -------------------HPERHRLFLT--LLVFSLPLPYIANQLGWLVAEMGR---QP 382 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W++ L + D + T + + + F+L Sbjct: 383 WIVYGVLKTA------------------------DAVSTSVSATQVAISLAGFTL----- 413 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSE 507 LY + ++YL+ KYAR GP + S Sbjct: 414 LYGGLGVIDIYLLAKYARKGPDSDGSG 440 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 151/505 (29%), Positives = 224/505 (44%), Gaps = 50/505 (9%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA +H LF +T+ L ++L + T + +M RFW K+F + Sbjct: 4 LDTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFAL 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 64 SFAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H+L T LVAFG+ +SA WI+ N WM P G F++ T + ++FNP Sbjct: 124 PGWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQG--FEMIDGVAFATDWWAIIFNPSMP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F H +A +T A I +SA+ L G + +G G L I + LGD Sbjct: 182 YRFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVRTALKVGVSIGALLIPVQIFLGDLH 241 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP K+AAMEG W+T P + A P++ N + IP L ++ THS D Sbjct: 242 GLNTKEYQPAKVAAMEGLWETGT-NVPLILFAIPDEAARENHAEIGIPGLASLILTHSWD 300 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GL + +AE L P V F +G GM + Sbjct: 301 GELQGLNDFVAEDGTVLH------------------PPVAPIFYSFRVMVGTGMAMLAL- 341 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 R P W + + L + Sbjct: 342 ----SWFGVFMMWKRRRMHPNPGACHW--------------LAVEGL----------PKI 373 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 L + W+A AGW+ TE GRQPW +Q ++ T A + + +A +L+ + + Sbjct: 374 YLWALVPMAFSGWVATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAGTLVGYLVV 433 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQS 506 Y L L A + ++ AR Sbjct: 434 YGLLLFAYISVIVYLARKAARGEDG 458 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 173/495 (34%), Positives = 243/495 (49%), Gaps = 70/495 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+ LSR QFALT ++H+LF PLT+GL ++A++ Y+ T +Y FW LF Sbjct: 1 MDVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAA 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA E + AFFLES F+ + FGW R+ Sbjct: 61 NFAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 + H + LVA GS SA+WI+ AN W Q P G + R E+T F + V NP Sbjct: 121 SPRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 S V+ +HT+ YV GA F+++ISA+YLLRGR A RSF++ F + + L GD Sbjct: 181 SVVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SA VA+ QP KLAAMEG ++ PA H+ P ++ R A + IP L +L Sbjct: 241 MSARVVAEHQPAKLAAMEGHFE--DGPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRD 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 D P+ GL ++ + P + A+ LM + ++ + +G L Sbjct: 299 PDAPIQGLASVPPDARPPVTVPFHAFHLMVALGTAFIAVTLVGLWLKRKGTL-------- 350 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 FR + V+ Sbjct: 351 ------------------------------FRTRWLLWIFVFAVL--------------- 365 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMI 478 S L WI E G RQPW + ++L T + S +T GQ+ S+I+ Sbjct: 366 -----GTYASNQLGWIVAEVG-------RQPWTVWNLLRTEHSFSPSVTAGQVLQSVILF 413 Query: 479 VGLYTLFLIAEVYLM 493 +Y L+ +Y+M Sbjct: 414 GLVYFGLLLVWLYVM 428 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 344 bits (882), Expect = 6e-93, Method: Composition-based stats. Identities = 163/437 (37%), Positives = 239/437 (54%), Gaps = 19/437 (4%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M DV+ LSR QF TA+ H++F+PLT+GL +A ME Y T +Y M RFW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA E + AFFLESTF+GL FG + Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +++ +VA G++LS WI+ AN W Q P G + + R EM SF+E++FNP + Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 V+++H + ++T AMFI+AISA+++++ + +A RS +G V G + + G S Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 A V + QP KLAA E W+TE A AP + A P+ + ERN F + IP +L L + Sbjct: 241 HAQLVGETQPEKLAAYEAHWETE-ANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDV 299 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 + V GLK AE P + +A+ +M ++ A++ +G+L L + Sbjct: 300 NAEVTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKT 359 Query: 361 A----PDMNHVTAAQYQAAMRGAIPQVAPVFWSFR------------IMVGCGSLLLLVM 404 A P A + A G P VF R +M+ G + + Sbjct: 360 AFWMLPLPYIANTAGWIVAEWGRQP--WAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYS 417 Query: 405 LIALVQTLRGKIDQHRW 421 + + K + ++ Sbjct: 418 FLVWLMVYLMKKEVRKF 434 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 86/191 (45%) Query: 309 NLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVT 368 L+ ET P A + + ++G +LS D + Sbjct: 243 QLVGETQPEKLAAYEAHWETEANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDVNAE 302 Query: 369 AAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALW 428 + P V F +FR+MV G +L+ ++ Q +G + + ++K A W Sbjct: 303 VTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKTAFW 362 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIA 488 LPLP+IA AGW + E+GRQPWA+ +L T A S LT ++ SL + + +Y+ + Sbjct: 363 MLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYSFLVWL 422 Query: 489 EVYLMQKYARL 499 VYLM+K R Sbjct: 423 MVYLMKKEVRK 433 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 148/511 (28%), Positives = 230/511 (45%), Gaps = 69/511 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA T YH L+ T+G+ + + ++ +++ T +Y+ + RFW K+F + Sbjct: 1 MDQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV TG+ + +Q G NWS Y+ D G ME L AFFLE+ F+G+ +G +R+ Sbjct: 61 AFGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + H + +VA G+ LSA WI++AN WMQ PT D R T F +VFNP Sbjct: 121 GEKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFTTTAD-GRFVATDFWGVVFNPSMP 179 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR--ERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + H + A ++TG + ++A+++ RGR ++ A ++F+I + + + +GD Sbjct: 180 YRLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGD 239 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 + QP+KLAA+E W T P +++AWP++ ERN +AL+IP L ++ THS Sbjct: 240 QHGLNTRKYQPMKLAAIEARWDTARR-VPINLIAWPDEKAERNDYALEIPLLGSLILTHS 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 L+ V GLK + P VL F +G GMLL Sbjct: 299 LNGEVKGLKEVPPSERPP----------------------VLPVFLAFRVMVGCGMLLLL 336 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 A ++ R W +GC L + L Sbjct: 337 VAFTGLYLRWRGRLYTTR----------WYQIACMGCVPLGFIATLAGW----------- 375 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 +TE GRQP+ I T A S + TG +A S+ + Sbjct: 376 ----------------------VVTEVGRQPYVIYGHFRTAEAVSPIATGAVASSMAIAF 413 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 LY L+ + + A GP + P Sbjct: 414 VLYNCLLLGFFWYAGRLAWRGPMSGLPTHPA 444 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 342 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 173/530 (32%), Positives = 259/530 (48%), Gaps = 90/530 (16%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +DL+RWQF +T +YHFLFVPLT+GL +A ++T + TGK Y +T+F+GKLF I Sbjct: 1 MDALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+EAL+AFFLESTF+GL+ FGW +L Sbjct: 61 NFAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K HL W GSNLSA +IL AN WM++P G +++ + MT ++ N + Sbjct: 121 PKRVHLATIWAAVIGSNLSAYFILAANAWMKHPVG--YEVVDGKARMTDLWAVLTNSSAL 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRE-------------RNVALRSFAIGSVFGT 228 + H V A +V F++A+ +++LR R ++ V Sbjct: 179 AQVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTA 238 Query: 229 LAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKI 288 +A + GD SA + + QP+KLAA EG + A APF +++ Sbjct: 239 IAGVVVAGSGDMSAKLLYEQQPMKLAAAEGLRH-DTAGAPFS-----------PVPGVEV 286 Query: 289 PALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE 348 P LL LAT+ V G ++L A +E G+ P++ F Sbjct: 287 PMLLSFLATNDPSAVVHGTEDLQARFE-------------KEFGPGDYRPNLPVVFWSF- 332 Query: 349 GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIAL 408 R+M+ G + + ++ L Sbjct: 333 ------------------------------------------RVMITFGMATVALSVLGL 350 Query: 409 VQT------LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA 462 T R + W+ + + +LPLP IA+ +GW ++E GRQPW +Q L T ++ Sbjct: 351 WLTRKRRRDPRPPRELPTWLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAAS 410 Query: 463 HSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 S ++ ++A SL + LY + +AE L+ ++ + GP T Sbjct: 411 VSPGVSLTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPEPAAPGPLTP 460 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 171/516 (33%), Positives = 236/516 (45%), Gaps = 65/516 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSRWQFALTA++H L+ LT G+ L ++E +++ T Y RFW KL+ + Sbjct: 6 LDTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYIL 65 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 NF +GVA+GL M FQFG NW+ +S VGD FG L EA MAF LE++F+G+ FGWQR+ Sbjct: 66 NFGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRV 125 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 H + T VAFG+NLS WIL+AN W+Q PTG F + + + + + NP Sbjct: 126 PPVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVFVE--GKFRVQDYFQAIANPFMV 183 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H A T I ISAWYLL+ R N +S + V + + +G S Sbjct: 184 KSFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMALVIAPLQVFVGHLS 243 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGIL--AT 297 A +V QP KLAAME W+T PA PA + V+A P + E N F +KIPALL L Sbjct: 244 AEQVYHYQPAKLAAMEALWETVPAGTPADWSVIALPNEAAETNTFEVKIPALLSYLLALR 303 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 LD P+ GLK P L V + + G+ L Sbjct: 304 PKLDTPILGLKEWAPSDRPHL---------------------VGLIYYSFRLMVAIGLYL 342 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 + A + + + ++W + + G L L Sbjct: 343 AALA--IVTIFVWWRTGLEGDRLRNYQWLWWGW---IFAGPLGYL--------------- 382 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 A+EAGW + GRQPW + L T A S L + FSL Sbjct: 383 ------------------AVEAGWIVRCVGRQPWIVYGQLRTAEAASDLPPQVVLFSLSG 424 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 +V LYT+F A ++ + + GP+ Sbjct: 425 LVALYTIFFFAALFFGSRIIQKGPNVALPIPGQANA 460 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 148/512 (28%), Positives = 237/512 (46%), Gaps = 69/512 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M+ V LSR QFA T +H LF ++GL L I E ++++T Y + +FW K+F Sbjct: 1 MYWVEILSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 + F +GV +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R Sbjct: 61 LTFGMGVVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +NKY H L + + G LSA WIL+AN WMQ P G ++ + E+ S+ ++FNP Sbjct: 121 INKYVHFLANFTIFAGVTLSAFWILSANSWMQTPDGVNYI--NGKFEVYSWYHVIFNPSV 178 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 +++H +MA Y++ M I+ +SA+Y+++ + + A V + +G L +GD Sbjct: 179 IPRYIHMLMAAYLSTLMVILGVSAYYIIKDKHHSFAKTCIKFSIVSILILSVGQLAVGDD 238 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 EV + QP+K AA+EG W T+ APF V A+P + QE+N F+++IP L ++ TH L Sbjct: 239 VGREVHEHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHEL 297 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D + GLK++ + P + ++ +M I V+ L Sbjct: 298 DGELIGLKSVPEKDRPVVAVVFYSFRIMVGIGTLMILMGVVGTILLARKKL--------- 348 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 W R+ L + ++ Sbjct: 349 -----------------------QTSKWFLRLCTLTTPLGFVAIITGW------------ 373 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 F EFGRQPW + +IL T + S + Q+ SL I+ Sbjct: 374 ---------------------FTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIII 412 Query: 481 LYTLFLIAEVY-LMQKYARLGPSAMQSEQPTQ 511 +Y + + + + GPS E+ Sbjct: 413 VYFVIFGFFYFRYLFRIINGGPSTGGEERMPY 444 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 145/511 (28%), Positives = 225/511 (44%), Gaps = 70/511 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR QFAL +H LF +T+ L ++L + + ++ I+ RFW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG R++ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H T +VA G+ LSA WIL N WM P G F++ TS+ +++FNP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTPAG--FEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + H ++A +T + + +SA+ +L+G + + V + + +GD Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGDTKRAPKLALHTAIVLAGILAPLQIFVGDLHG 262 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 + QP K++A+EG W TE AP + A P + +RN +A+ IP L ++ TH Sbjct: 263 LNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTHDAQG 321 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + GL P V F + GML+ Sbjct: 322 EIKGLDTFDGNH-----------------------PPVAPVFWSFRIMVATGMLM----- 353 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + + A + P++ + MVG + L Sbjct: 354 -LASAWLGCFYLARKKPFPRL-----YLKAMVGLTFSGWVATL----------------- 390 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 AGW++TE GRQPW + IL T A + L G + FSL + Y Sbjct: 391 ----------------AGWYVTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVYAVTY 434 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + L+A ++ ++ A + + E Sbjct: 435 AVLLLAYIHTLKVMANKAVNVEEFETHNPSA 465 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 338 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 151/493 (30%), Positives = 222/493 (45%), Gaps = 65/493 (13%) Query: 20 FLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGT 79 L+ LT G+ L ++E +++ T Y RFW KL+ +NF +GVA+GL M FQFG Sbjct: 1 MLWPVLTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGL 60 Query: 80 NWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNL 139 NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ H + T LVAFG+NL Sbjct: 61 NWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANL 120 Query: 140 SALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFI 199 S WIL+AN W+Q P G F + + + + + NP F+HT A T I Sbjct: 121 STFWILSANSWLQTPAGGEFIA--GKFVVQDYFQAIANPFMVNSFLHTFFATLETSLFVI 178 Query: 200 MAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGE 259 ISAWY++ R LRSF + + + +G SA +V QP KLAAME + Sbjct: 179 GGISAWYIINQRRTEFFLRSFKVILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQ 238 Query: 260 WQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGIL--ATHSLDKPVPGLKNLMAETY 315 W+T PA PA + ++A P E+N + +K+P L L LD+PV GLK + Sbjct: 239 WETVPAGEPADWSLLAVPNNKVEKNEWEIKVPGALSYLLELKSKLDQPVKGLKEWEPKNR 298 Query: 316 PRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAA 375 P++ V + +G G+ L+ + + Sbjct: 299 PQM---------------------VGLIYYSFRIMVGIGLFLAGLMLITVIQWLSGKLST 337 Query: 376 MRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWI 435 + W R + G L I Sbjct: 338 TT-----ITQQKWLMRAWIFAGPLGY---------------------------------I 359 Query: 436 AIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 A+E GW + GRQPW + L T A S + G++ FSL+ ++ +Y +F +A +Y + Sbjct: 360 AVETGWIVRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGSR 419 Query: 496 YARLGPSAMQSEQ 508 R GP+ Sbjct: 420 IIRKGPNLELPAP 432 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 337 bits (863), Expect = 8e-91, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 203/505 (40%), Gaps = 66/505 (13%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 DL+R F H L+ PLT+GL L E ++ T + +TRF+ KLF INF Sbjct: 9 DLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINFGA 68 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW +++K Sbjct: 69 GVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISKKM 128 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFV 185 HL T+ VAF S LSA+WIL AN WMQ PTG H + + ++ +FNP F Sbjct: 129 HLFATFNVAFSSMLSAMWILVANSWMQSPTGVHL--EKGLFLVDDWTAAIFNPNFLTAFP 186 Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 H +A G F+ ISAW + + R + +R+ + + + +GD V Sbjct: 187 HMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRTLTASLMALVIVAPLQVYIGDELGRTV 246 Query: 246 AQVQPVKLAAMEGEWQT----EPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A+ P LAAMEG W T +++VAWP++++ N F + IP +L +L H Sbjct: 247 AEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVLSLLEDHKWV 306 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL E P + A+ +M + +G L R Sbjct: 307 STVKGLDQFKPEDRPPVLAPFYAFRIMVAAGGILMLVAFWALYLRYKGKFNALELQRRP- 365 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R ++ L + + Sbjct: 366 --------------------------WFLRAVIFSAILPYVAIW---------------- 383 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 GW+ E RQPW + ++ T S ++ I V Sbjct: 384 -----------------TGWWTREIARQPWIVHGMMRTSEGVSQMSISAEIAWFIGFVFF 426 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQS 506 + I Y K R GP + Sbjct: 427 DLVVWIGAWYFFSKVVRRGPDMHEE 451 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 145/399 (36%), Positives = 209/399 (52%), Gaps = 6/399 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + LSR QFA+TA +HFL+ PLT+GL ++ ME YV +G Y MT+FW KLF Sbjct: 3 FDALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAA 62 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA E + AFFLES F+ + FGW R+ Sbjct: 63 TFSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRV 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDT--LRMEMTSFSELVFNPV 179 + HL + +V FGS +SA WI+ AN WMQ P H + +R E+ F +VFNP Sbjct: 123 SPKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPS 182 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + +F H ++ ++ G +M+I+A+Y+L+ R A +SF + V ++ I L +G Sbjct: 183 TVSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGH 242 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 SA VA+ QP KLAA+EG ++TE AP ++ P ++ E + IP +L L Sbjct: 243 RSAEVVAEYQPSKLAALEGLFKTE-DGAPLYLFGHPSEETEETI-GIAIPGMLSFLVHQD 300 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL--GYGMLL 357 V GL E P + A+ +M + + F G L ML Sbjct: 301 FSATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFMLQ 360 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGC 396 A Q Q V+ R Sbjct: 361 VFIFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAI 399 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 1/165 (0%) Query: 351 LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQ 410 + +LS T + P V F ++ IMV G + + L L Sbjct: 287 IAIPGMLSFLVHQDFSATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFL 346 Query: 411 TLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS-ALTTG 469 RG + +++++L++ ++S+ P+IA + GW E GRQPW + ++L T A S +++ Sbjct: 347 LWRGTLFENKFMLQVFIFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAISKSVSGA 406 Query: 470 QLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 ++ SL + LY L L V++M + + GP + + P G Sbjct: 407 EVLTSLFLFTLLYFLLLFVWVFIMDRKIKAGPEDVDGDIPILDAG 451 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 164/523 (31%), Positives = 271/523 (51%), Gaps = 21/523 (4%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKL-FGINFA 64 D +R +FAL+ + H +FVPL +GL+ + AI ET+YV Y+ +F GKL I F Sbjct: 8 DSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIVFV 67 Query: 65 LGVATGLT--------MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFF 116 L + TG+ + N S +S YVG L L T V LF+ Sbjct: 68 L-IITGILTPPMPEDWQQLDIFIN-SVFSEYVG-----LLGTIVSTGMMLWLTAVSLFYV 120 Query: 117 GWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT-GAHFDIDTLRMEMTSFSELV 175 GW+ L HL +TWL+ F + L ++ NGWM P+ FDI+T+ + +S E+V Sbjct: 121 GWRYLPAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIV 180 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 P++ +F H ++ G + ++++S +YL + R++ A IG+ G + + Sbjct: 181 STPMASTRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAI 240 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 GD +V Q QP+KLA +E W+T+ A + A P+Q E N F +KIP +LG + Sbjct: 241 FSGDIHGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWM 300 Query: 296 ATHSLDK-PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYG 354 + + D PV G+K L AE R++ G +A + S + + + + + DLGY Sbjct: 301 LSGTDDTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYA 360 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 L+ +Y PD+ VT Q + A + V +F+SFR+MVG G +LL+ + ++G Sbjct: 361 ELVRKYNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKG 420 Query: 415 KIDQ-HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL-A 472 +++ +LK++ ++LP+P+IA +GW ++E+GRQPW I ++PT + TGQ Sbjct: 421 RVNSVSTRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQTNG 480 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLGP-SAMQSEQPTQQQG 514 F L ++ Y + ++ ++ + GP A+ E+ Q G Sbjct: 481 FQLPTLLMSYAALFLILGVILARWIKQGPKPAISVEKVCLQAG 523 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 150/512 (29%), Positives = 232/512 (45%), Gaps = 60/512 (11%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + ++L+R QF T L HF + +++GL+F +A M+T + TG + +TRF+GKL + Sbjct: 1 MNSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+E L AFF+E+ F+GL+ FGW RL Sbjct: 61 SFAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+VA + +SA IL AN WMQ+P G +++ +T ++FN Sbjct: 121 PRRLHLACVWIVAGATVVSAYAILVANSWMQHPVG--YELVDGSARLTDIVPVLFNLTVG 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + H V + G + ++AI+A++LLRGR+ + G A + T G Sbjct: 179 LTVAHVVSGALLAGTVVVLAIAAFHLLRGRDSAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 AYEVAQVQPVKLAAMEGEWQTE-PAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 + QP+K+AA E ++TE PA + + LK+PA L ++ S Sbjct: 239 GMLAMKQQPMKMAAAEALYETEKPAGLSLFALGGLSTNPGELIVDLKVPAALSLINQLST 298 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V G+ +L E R G+ P V + Sbjct: 299 QSTVRGINDLQTEAEQR-------------YGPGDYVPVVGLMYWSFRTM---------- 335 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 VG G+ L+ +M + +R ++ R Sbjct: 336 ---------------------------------VGGGTALIAIMALGCWLAVRDRLAGSR 362 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIV 479 L++AL + LP++A GW + E GRQPW I +L T A+S + + SL Sbjct: 363 RFLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANSPNVGAWTVGLSLAGFA 422 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 Y + R G A + + Sbjct: 423 VFYGAVFFFAGRVAAHEVREGLEAPADGRASD 454 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 124/510 (24%), Positives = 190/510 (37%), Gaps = 64/510 (12%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +DL+R Q A + +H F +GL +LL E ++ TG ++ +T+ W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+G +G + F+FG W + + G G ME AFF E+ FVG++ +GW+RL+ Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEG-FAFFTEAIFVGMYLYGWKRLS 126 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 H L W +A LS L+I+ N WM P G ++ +P + Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRG--IVEQNGKLLEAKPYAPFISPGTPP 184 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + VH ++A + + AI A +LRGR R IG L +GD +A Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIGLAVVLACAPLQLIVGDWAA 244 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 QP KLAAMEG + T + APF + + + L+IP L +L S Sbjct: 245 RVAGANQPFKLAAMEGLYHTG-SHAPFALGGIYDNKTGEIRYGLEIPGGLSLLEGFSTGH 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 + GL + P A+ M ++ F Sbjct: 304 VIKGLDGAPPDERPNGTLVHGAFTTMVGAGSALIGLSLITGF------------------ 345 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 + RG P + G +L ML Sbjct: 346 -------VVLRRRRRGERPLLPTSRPWLIAAACTGPAAMLAML----------------- 381 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLY 482 GW +TE GRQPW + D + + +A + LY Sbjct: 382 ----------------TGWEVTEGGRQPWIVGDHMRVVEGVTG--GDAVAPMFAGTLVLY 423 Query: 483 TLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 A + +++K A GPS Q Sbjct: 424 LGLAGALLLILRKMATGGPSGEQLRPGQPA 453 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 119/512 (23%), Positives = 205/512 (40%), Gaps = 70/512 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +R Q A + +H +F + + + F +++ ++ T K +YRD+T+ W K I Sbjct: 1 MDDFLAARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA G +G + F+ G W + + G IFG P ++E AFF+E+ +G + +GW +L Sbjct: 61 FFATGAVSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEG-TAFFIEAIALGFYLYGWNKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N + H +V LS + ++ AN WM P G + + + +FN Sbjct: 120 NPWFHWATGVVVGVSGLLSGILVVAANAWMNSPAGFDYI--NGQYLNIDPIKAMFNEAWF 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H +A +V+ + + A +L+G+ ++F I +VFGT+A GD S Sbjct: 178 SQSLHMCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDIS 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +VA+ QP KLAAME + TE AP + P+ ++ +ALKIP LL +AT + Sbjct: 238 AKDVAKRQPEKLAAMEAHFHTEK-FAPLIIGGIPDTANKKVDYALKIPGLLSFMATGDFN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL + E P + A+ +M + +L + Sbjct: 297 GEVKGLDAVPKEDQPPVAVTHYAFQVMVGLGMAMVGIAILYFIALWKKKQWL-------- 348 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W ++ V L + + Sbjct: 349 -----------------------DSKWLLKLFVAATPLGFIALEAGW------------- 372 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 +TE GRQPW I+ ++ T A + + + +S + + Sbjct: 373 --------------------TVTEVGRQPWIIRGVMRTADAVTPMPG--IVYSFYLFTAV 410 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 Y I L+ + + S SE + Sbjct: 411 YISLAIIVSLLLYRQITMVDSLYDSESVQSKN 442 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 324 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 135/514 (26%), Positives = 210/514 (40%), Gaps = 66/514 (12%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSR FA H L+ P+T+G+ +LL +E ++ TG + + RF+ K+F INF Sbjct: 8 PVLLSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINF 67 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 GVATG+TME FG + +S VG FG L E + AF E+ F+GL FGW +++K Sbjct: 68 GAGVATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSK 127 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H T+ V S LSA+WIL AN WMQ P G ++T++ + N Sbjct: 128 GMHAFATFNVGLSSTLSAMWILVANSWMQSPNGVVLK--NGLFQVTNWWNAILNENFTWG 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F H +A A+S+W++L+ R ++ + + + + +GD+ Sbjct: 186 FPHMWVATVELALFVFAAVSSWFILKNRNADLFTKLLKPTLLALLIVAPIQIFIGDTLGR 245 Query: 244 EVAQVQPVKLAAMEGEWQTEPA----PAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 +VA QP LAAMEG + T +H++A+P + N+FA+ IP +L +L TH+ Sbjct: 246 DVAMTQPTSLAAMEGHYHTYLPNGKVNTGWHLIAFPNAKNDGNSFAITIPHVLSLLETHT 305 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + V G+ + A+ P + A+ M I + + L G L Sbjct: 306 WNGKVTGMDSFPAKDRPDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALRKH 365 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 W R +V G L L Sbjct: 366 P---------------------------WFLRSVVFSGFLPYL----------------- 381 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 AI GW+ E GRQPW + +++ TY S ++ GQ F + Sbjct: 382 ----------------AIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIFWFAGYI 425 Query: 480 GLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + Y + G + Sbjct: 426 VFELVVWSGAWYFFSRVIAKGVDDIAPSDTLFHH 459 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 158/499 (31%), Positives = 238/499 (47%), Gaps = 70/499 (14%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ LSR QFA+TA +HFLFVPLTLGL L+A+MET+Y +R M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFF-GWQ 119 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLAMEAL AFFLE TF+G + F G Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 120 RLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 R + W+VA G+N+S+LWIL ANG+MQ+P G D ++ MT F L+ N Sbjct: 121 R--QKLKAFSMWMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITNGY 178 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 +HT++A Y+ + +M I A++ L+G V +SF I + + LG Sbjct: 179 VWYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVLGH 238 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFA-LKIPALLGILATH 298 A V +QP K AAM+ W+T + P +++ P+ N+ L IP L L T Sbjct: 239 GYAQYVTALQPTKGAAMDAIWETRSS-VPMYLIQVPDSSTGSNSVQLLGIPGLASFLYTG 297 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 S + GL L + P ++ ++ LM + +L + G L Sbjct: 298 SFSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLGLYLQKSGKL------- 350 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 T+ +Y + +IP L L + + G+ Sbjct: 351 --------YTSKKYLKLLMWSIP-----------------LPYLTITAGWIVAEVGR--- 382 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 QPW + +L T + S++ T + S+ +I Sbjct: 383 ------------------------------QPWMVYGLLRTANGVSSVPTSDVLLSISLI 412 Query: 479 VGLYTLFLIAEVYLMQKYA 497 Y + LI E+YL++K Sbjct: 413 SAFYMVLLIFEIYLIKKTV 431 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 161/520 (30%), Positives = 242/520 (46%), Gaps = 65/520 (12%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +DL+R QFA T++YHF FVP+T+G+ L+A++ T + G + + RF+G L I Sbjct: 1 MDQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + ++GV TGL EFQFG NWS YS +VGD+FGAPLAME L AFFLESTF+GL+ FG+ L Sbjct: 61 SISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HLL W+VA G+ LSAL+I+ AN WMQ P G + DT R ++TS ++ NPV Sbjct: 121 PRRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFI 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV----ALRSFAIGSVFGTLAIIGTLQL 237 ++H ++ + G ++A+SAW L R + + +G + + + Sbjct: 181 WGYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHV 240 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQT--EPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 G QP+K+AA E WQT + + + W D ++IP LL +L Sbjct: 241 GGQLGINETSYQPMKIAAAEANWQTCQPCSFSMLQIGGWTADDPPTKI--IEIPHLLSLL 298 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 AT + + V GL L + + G P+V + + Sbjct: 299 ATGTWNGEVQGLTPLNEQYQQ-------------QYGPGEYVPNVFIQYWSMRVMAYLAT 345 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 L++ + + + A Sbjct: 346 LVALFGVWGIWLWWRKKLATA--------------------------------------- 366 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSAL-TTGQLAFS 474 R L +A W + P++ AGWF+TE GRQPW +Q ++ T S + GQ+ S Sbjct: 367 ----RVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVS 422 Query: 475 LIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 L ++V LYT + LM ++AR A Sbjct: 423 LSIVVVLYTTIGVIAAILMLRHARQPLPAEPLTPDRPADA 462 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 141/510 (27%), Positives = 211/510 (41%), Gaps = 68/510 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+R QFA T +H + LT+GL L ++E +++ + IY D+ ++W K+F +N Sbjct: 18 ALLLARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNV 77 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+GV TG+ MEFQFG NW S+ G + G + ME L+AFFLE+ F+G+ FG ++ Sbjct: 78 AVGVVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRP 137 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 + H L T +VA GS SA WIL+AN WMQ P G D R + + ++FNP + Sbjct: 138 WVHFLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGPD-GRFQPVDWWAVIFNPSFPYR 196 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 +H +A + A + A+ AW+LL+ ++ A R F+ G +GD Sbjct: 197 LMHMSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHGE 256 Query: 244 EVAQVQPVKLAAMEGEWQ--TEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 QPVKLAAMEG W P + A P+ + RN + IP++ + H+L Sbjct: 257 NTRDHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIPSVGSLYLRHNLT 316 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + L + P + A+ M + V L G L Sbjct: 317 GTIHSLNQFPPDELPWVPGVFFAFRAMVGLGFLMIFFGVAGLVVRLRGRLWEAR------ 370 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R MV ++ ML Sbjct: 371 --------------------------WLQRGMVAMAPAGVIAML---------------- 388 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 AGW +TE GRQPW I L T + S + + S + IV + Sbjct: 389 -----------------AGWVVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVV 431 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 Y L + M + P + Sbjct: 432 YLLVFALGMGFMLRLLAKPPGNDTPDANPA 461 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 128/512 (25%), Positives = 218/512 (42%), Gaps = 69/512 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA +H +F T+GL +A ET++ T I++ +++FW ++F + Sbjct: 3 LDPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAV 62 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV +G+ M FQFGTNWS +S + G L+ E + AFFLE+ F+G+ FG ++ Sbjct: 63 VFGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKV 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL +VA G+ +S+ WIL AN MQ P G +TS+++ +F P Sbjct: 123 PQGVHLFAAIMVATGTFISSFWILAANSLMQTPQGLELI--NGMYYVTSWADSLFTPSFG 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F H +A ++T ++ + +SAW++L+ RE ++ +I F + +GD Sbjct: 181 YRFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWFLLVLAPLQAVVGDFH 240 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP+K+AAMEG W+T P + A P+++ ++N F + IP L + TH D Sbjct: 241 GLNTLKHQPMKVAAMEGNWETSSQ-VPLLLFAIPDKESQKNHFEVAIPGLASYVLTHDWD 299 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 VPGL + E P + ++ +M + V +G + + + Sbjct: 300 GVVPGLNEVPIEEQPPVFIVFWSFRIMVGLGLLMIAFGVWGLVLRRKGRIYHNNIFLN-- 357 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 R M + +L V T G+ Sbjct: 358 ---------------------------GLRFM---SLSPFIAVLAGWVVTETGRAP---- 383 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVG 480 W I + + LT G F+LI + Sbjct: 384 -----------------------------WLIYGQMTHAQGLTPSLTGGMALFTLIGYIV 414 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 +Y+ A VY + + + G + ++ Sbjct: 415 VYSCVFSAGVYYLLQVFKGGLEKANAPHELEE 446 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 140/396 (35%), Positives = 212/396 (53%), Gaps = 6/396 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + LSR QFA+T ++H++F P+T+GL +L +E +++ T +Y +FW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA E + AFFLES F+ + FGW + Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLR--MEMTSFSELVFNP 178 + H L + +VA G++ SA+WI+ AN WMQ P G + +TSF ++VFNP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 + + H + ++ GA ++++SAWY+L+ R + +SF + V G + + G G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATH 298 DSSA EV+ QP K AAMEG ++ AP H++ W + IP LL +L H Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMESG-APQDLHLIGWMNPSTHEVT-GISIPYLLTLLTHH 298 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 LD + G+ ++ + P + ++ LM I + + G L L Sbjct: 299 DLDTSITGMNDIPQDERPPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLL 358 Query: 359 --RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI 392 + A Q A+ Q V+ R Sbjct: 359 WCFVFSVLGPQIANQAGWAVAELGRQPWIVYGILRT 394 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 1/146 (0%) Query: 370 AQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWS 429 + P + PVF+SF +M+ G L + L L RG + Q RW+L ++S Sbjct: 305 TGMNDIPQDERPPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFS 364 Query: 430 LPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVGLYTLFLIA 488 + P IA +AGW + E GRQPW + IL T A S LT + SL M +Y L L Sbjct: 365 VLGPQIANQAGWAVAELGRQPWIVYGILRTEHAVSPTLTAAEALSSLGMFFVIYALLLAL 424 Query: 489 EVYLMQKYARLGPSAMQSEQPTQQQG 514 +Y + GP E +G Sbjct: 425 FLYQITHKIHKGPDQEAGEDDGAGEG 450 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 134/528 (25%), Positives = 217/528 (41%), Gaps = 84/528 (15%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M D + SR QFALT + H +F +++GL L + + +Y + RFW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+E +MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRM--EMTSFSELVFNP 178 ++ + L + V G+ LSA+WIL AN WMQ P G ++ + + NP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR-------ERNVALRSFAIGSVFGTLAI 231 FVH A + A+ + I+A+Y+ R ++ I V + Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 232 IGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQE------RNAFA 285 GD A + + QP K AAME W+T+ + P ++VA+P Q+ + F Sbjct: 241 PLQAIHGDLYARHIVETQPQKFAAMEAIWETD-SYVPEYIVAFPTSIQDLLDLRAKEIFG 299 Query: 286 LKIPALLGILAT-HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAF 344 IP LA+ + GL P + ++ +M + + Sbjct: 300 FGIPGGASWLASGGDPQATIQGLNEFEGP-QPPVAIVFWSFRIMVALGFWFILLAFWGVY 358 Query: 345 RGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVM 404 R G+L LL + ++ L L+ + Sbjct: 359 RWWRGELYEDDLL--------------------------------HKALMLSAPLGLVAV 386 Query: 405 LIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS 464 + + T E GRQPW IQ ++ T + S Sbjct: 387 ELGWIVT---------------------------------EVGRQPWVIQGVMKTSDSVS 413 Query: 465 A-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQ 511 LT + +L+ +Y L Y++ + R GP T+ Sbjct: 414 PGLTGAEATATLVGFAIVYLCLLTLYTYVIVRIIRAGPPDGDELTTTE 461 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 132/520 (25%), Positives = 202/520 (38%), Gaps = 79/520 (15%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 SR QF T H LF L++GL + + TG Y + FW K+F + F Sbjct: 27 AEFASRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAVGF 86 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 +G TG+ M FQFGTN+ +S G++ G PLA EA MAFFLE+ F+G+ FG ++++ Sbjct: 87 VMGTVTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKVSD 146 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPVSQ 181 + L + L FG+ LS WIL N WMQ P G ++T F P Sbjct: 147 RTYFLSSVLTGFGAWLSGFWILVVNAWMQTPQGYEMITRNGMEVAKLTDPIAAFFTPRMT 206 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +VH + A ++ A+ + ++A+ + + R+ + I + +A GD+ Sbjct: 207 WMYVHMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLLLIVAAPLQAVHGDAY 266 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE------QDQERNAFALKIPALLGIL 295 V QP K AAME ++T A H+ A P E N FA+ +P + L Sbjct: 267 GRHVEDTQPQKFAAMEAHYETGT--ADLHLFAIPTSPDAIMNPSEENLFAISLPRVGSFL 324 Query: 296 AT-HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYG 354 A+ D V GL P V F +G G Sbjct: 325 ASGGDFDAVVKGLDEYEQN------------------------PPVPLVFWSFRIMVGLG 360 Query: 355 MLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRG 414 L A ++ + + R M+ L +L Sbjct: 361 FLFIGLAFWGGYLIYRDRLSDSSLYL----------RAMIAASPLGYAALL--------- 401 Query: 415 KIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAF 473 GW++TE GRQPW +Q L T A S+ L++ + Sbjct: 402 ------------------------TGWYVTEIGRQPWVVQGELKTGEAVSSTLSSTEATL 437 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 SL V +Y ++A +Y ++ + +E Sbjct: 438 SLAAFVVIYIGLVVAALYTLRWLIEDELDELGAEPAPDDH 477 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 154/532 (28%), Positives = 228/532 (42%), Gaps = 78/532 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVV---------TGKTIYRDMT 52 + L+R QFA+T LYH+LFVPL++ L A+++T ++ Y ++ Sbjct: 1 MSIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLS 60 Query: 53 RFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVG 112 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+E ++AFFLE+TF+G Sbjct: 61 LLTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLG 120 Query: 113 LFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFS 172 L++FG RL HL W+VA G+ +SA IL AN +MQ P D T R + SF Sbjct: 121 LWWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFR 180 Query: 173 ELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG------RERNVALRSFAIGSVF 226 +L+ N V+ F HT + G +MA+ W+LLRG + G+ Sbjct: 181 DLLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFAAFRALSRFGAWA 240 Query: 227 GTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAL 286 GD + +VQP+K+AA EG ++T APF + ++ +R FA+ Sbjct: 241 TLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRPTFAI 299 Query: 287 KIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRG 346 ++P +L LA S V GLK+L + G+ P + AF Sbjct: 300 EVPGMLSFLAKGSFSAEVLGLKDLQDAY-------------AAQFGAGDYTPWIPVAFWS 346 Query: 347 LEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI 406 + G G L LV L+ Sbjct: 347 FRLMI-------------------------------------------GVGMLAALVALV 363 Query: 407 ALVQTLRGKIDQH-----RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYS 461 L T + + R +L LP A GW TE RQPW + + T Sbjct: 364 HLWVTRKSAVLDPDPRLARGILWTLPVLPLLPLFANSFGWIFTETARQPWLVFGLFKTAD 423 Query: 462 AHSA-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 S L+ ++A SL +Y A L+ + R G + Q + Sbjct: 424 GVSPGLSFAEVALSLAAFTLVYGALAWAWTLLVTRLVRRGLPELPVPQREDE 475 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 311 bits (796), Expect = 5e-83, Method: Composition-based stats. Identities = 166/515 (32%), Positives = 243/515 (47%), Gaps = 67/515 (13%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + L+R QFA TA YHF+FVPLT+GL +LAI ET Y + T+FW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA EAL+AFFLESTF+G+ FG +R++ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 +++ WLV FGS LSALWIL AN WMQ P GA D + +T F NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 ++ HT++A + GA MA+SAWYL++ R + A+++ +G+V G + L SSA Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDK 302 VA+ QP KLA MEG + +E P + W +++ ++ IP LAT + D Sbjct: 246 VTVAEEQPTKLAMMEGMYDSEVP--PLYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAP 362 GL L A G +P + Y ++++ Y Sbjct: 304 EYEGLNQLAASAE-----------------YGALDPETAPVNFVFQT---YHLMVAMYGL 343 Query: 363 DMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWV 422 M V A G I + W R+++ L+ + G Sbjct: 344 IMLTVILALVFTLRGGKIQNMK---WLQRLVLISPVFPLIAIQAGWFTAEVG-------- 392 Query: 423 LKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD---------ILPTYSAHSALTTGQLAF 473 RQPW + +L +++ +L Sbjct: 393 -------------------------RQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELVI 427 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ 508 ++++ + +Y ++A M ++ + GP A Sbjct: 428 TMVLFLVVYAFLMVAWARTMGRFIKEGPVAEHEPA 462 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 130/508 (25%), Positives = 214/508 (42%), Gaps = 69/508 (13%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ R QFA T +H+LF LT+GL ++ + Y+ T Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LAME + +FFLES+F+GLF FG + Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 L H + L+ GS S I+ + WMQ P G ++ + + +F L NP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ-LGD 239 ++H A VT + + I A+Y+L + + G +FG ++ + GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 A V + QPV AAMEG + TE + ++ P+ ++ + +P +L L + Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDKKLDNKIAVPNILSFLTYGN 312 Query: 300 LDKPVPGLKNLMAETYPRLQRG-RMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 ++ + GL + +P G A+ +M + V+ F+ + G L Sbjct: 313 WEQEIKGLDQFEEDLHPTNISGLYYAYHIMVGLGTVFIGLMVISLFQLIRGKL------- 365 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 Q + WS M+ + G+ Sbjct: 366 ----------------------FQTKWILWSLMFMM---PFPYIANTTGWYTAELGRQP- 399 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIM 477 W + +++ T + S +++G F+L+ Sbjct: 400 --------------------------------WLVYNLMRTAAGASPTVSSGNTLFTLLG 427 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 +GLY L + + L+ K GP + Sbjct: 428 FIGLYLLLGMLFLLLVGKIINKGPHNVD 455 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 308 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 117/511 (22%), Positives = 209/511 (40%), Gaps = 70/511 (13%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D +R Q A++ +H +F + + + F + I +Y+ TG IY+ +T+ W + I Sbjct: 14 MDDFIAARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAI 73 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA G +G + F+ G W + + G IFG P ++E AFF+E+ +G F +GW R Sbjct: 74 LFATGAVSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWNRF 132 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N++ H +V S + ++ AN WM P G FD + + +FN Sbjct: 133 NRWFHWATGLVVGISGIASGILVVAANAWMNSPAG--FDYVDGKYINIDPIQAMFNDAWF 190 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H ++A +V + + A +++ + + +F I ++ +A + GD S Sbjct: 191 SQALHMMLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDIS 250 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +V + QP KLAAME ++TE A A F + P+++ + +K+P LL LA +D Sbjct: 251 AKDVGKRQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKYGIKVPGLLSFLAYGDID 309 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 KPV GL ++ + +P + A+ +M + +L + Sbjct: 310 KPVTGLHDIPRDEWPPVAITHYAFQIMIGLGMLLVLLSILYFIALFKKKSWLKST----- 364 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W FR+ V L + + Sbjct: 365 --------------------------WLFRLFVIAIPLGYIALEAG-------------- 384 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 W +TE GRQPW I I+ T A + + +A+S + + Sbjct: 385 -------------------WVVTEVGRQPWIIYGIMRTIDAVTPMPG--IAYSFYVFTAV 423 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 + +A +YL+ + + P + Sbjct: 424 FVSLSVAVIYLLYRQITMVGYLYDPTDPNFK 454 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 121/482 (25%), Positives = 203/482 (42%), Gaps = 72/482 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + +R+Q A + +H +F + +G+ L+ I E +++ T + Y + R W K + Sbjct: 1 MDELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + + G I G A+E AFF+E+ F+GL+ +GW +L Sbjct: 61 LFAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 H L + VA S + +L+AN WMQ PTG F++ + + +FNP Sbjct: 120 PPKIHWLCGFPVALSGLASGVLVLSANAWMQSPTG--FELVGGQPTNIDPVKALFNPAWG 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 V +H+ ++ Y+ A + A+ A+ +LRG+ R+ I ++ + GD+S Sbjct: 178 VMALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDAS 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A VA QP KLAAMEG + +E A + WP+ ++E+ +A++IP LL LA H + Sbjct: 238 ARSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL ++ + +P + R A+ +M + V L Sbjct: 297 ALVRGLDSVPRDQWPNVVVVRAAFQVMVGLGIFLVVVSVWYWASRFWRRL---------- 346 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W + +V G + Sbjct: 347 -----------------------HTKWLYIALVLSGIAGYTALEAGW------------- 370 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 +TE GRQPW I I+ T A + + +LI +V + Sbjct: 371 --------------------IVTEVGRQPWIIYGIMRTSEAVTPTEG--VFETLIAVVAI 408 Query: 482 YT 483 Y Sbjct: 409 YA 410 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 128/499 (25%), Positives = 203/499 (40%), Gaps = 73/499 (14%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D +D +R A++ H + ++ +E +Y+ TG +YR + R W ++ Sbjct: 19 DHLDQARQMQAMSFAVHIPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIMVAL 78 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 FA+GV TG + F+ G W + GD+FG A+E AFFLE+ F+ ++ +GW RL Sbjct: 79 FAVGVVTGTILSFELGMLWPEFMGTFGDVFGLGFAIEG-FAFFLEAIFIAIYVYGWDRLP 137 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVF-NPVSQ 181 H + + F L A ++ NGWM P G F + E +F N Sbjct: 138 PKWHFASGFPIVFTGVLGATMVIAVNGWMNNPGG--FRLVNGEAVDVKPWEALFGNSFFW 195 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLR-GRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + VH +A Y+ + A+ AW LR GR + AI A L +GD Sbjct: 196 HEVVHMYVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVGDW 255 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 +A EVA QPVKLAA+EG +T A H+ W ++D + ++IP LL +LA H Sbjct: 256 AAREVAVHQPVKLAAIEGLQRTTSG-ASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFHDP 314 Query: 301 DKPVPGLKNLMAETYP-RLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSR 359 + V GL ++ E P + R A+ M I G V Sbjct: 315 NATVRGLDSVPPEDRPGPINTVRFAFQAMVLIGSGLAMLAVFVLL--------------- 359 Query: 360 YAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQH 419 +R ++ W +R +V G Sbjct: 360 ----------------VRWRKGRLPRSVWFYRALVLAGP--------------------- 382 Query: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 +A+ GW TE GRQPW + +++ T A + + + L+ Sbjct: 383 ------------GAVVALICGWITTEVGRQPWVVYNVMRTDEAVTGAGGVPVGYGLLA-- 428 Query: 480 GLYTLFLIAEVYLMQKYAR 498 +Y L+A +++++ AR Sbjct: 429 LVYVGLLVAVWWILRRLAR 447 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 159/516 (30%), Positives = 239/516 (46%), Gaps = 55/516 (10%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI----YRDMTRFWGK 57 D ++L+R QFA T H+LFV LTLGL+ L+AI+ T V T + +FWG+ Sbjct: 1 MDTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 L+ IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FG Sbjct: 61 LYVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W RL ++ WLV + SA WIL ANG+MQ P G +++ R +T F+ + N Sbjct: 121 WDRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVG--YEVREGRAYLTDFAAQLTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLL-RGRERNVALRSFAIGSVFGTLAIIGTLQ 236 P + V F H + A +TG +F+ +SA++LL R RER G + + Sbjct: 179 PNATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAAASTFPVYM 238 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 LG + +A QP+KLA + GE +E + I L +A Sbjct: 239 LGAAQFAVLADSQPMKLALLAGEGTSELQKDMVERHGPGDYVPPE-----WIETWLHTMA 293 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 L L+ R R R+ ++M G +G+ Sbjct: 294 NIGYLVSTLALCALLVLFRARFTRSRLLAIVMVLAVGGL-----------------FGLY 336 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 L Y D A + L A+V G+I Sbjct: 337 LGSYLFDTPGPYNEIIMPA--------------------------CIALAAVVLGFGGRI 370 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLI 476 + R + + + ++PLP++A GW E GRQPW + L A S ++ G + SL+ Sbjct: 371 RRWRGLGWLLVVAIPLPFVASVGGWLFREVGRQPWIVYGELKVSDAVSPVSFGHMLTSLV 430 Query: 477 MIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 + VG+ + L+ ++AR GP+A Q + Sbjct: 431 IFVGVLGALAVTNWTLIARFARRGPAASQLGVARDE 466 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 113/505 (22%), Positives = 202/505 (40%), Gaps = 69/505 (13%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R Q A T +H +F + +GL L+ + E + + G ++R + + W K F + FA Sbjct: 22 LLPARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFA 81 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G +G + F+ G W + G + G P +E AFF E FVG++ +GW RL + Sbjct: 82 VGAVSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEG-FAFFTEGIFVGIYLYGWNRLAPF 140 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H L +A +SA +++ N +M P G D D ++ + NP + + Sbjct: 141 HHWLCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDAD-GKLLDVQPWTAMLNPATGAQT 199 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H ++A Y+ + + AW +LRGR R+ +G + G + +G + + Sbjct: 200 THMIVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHV 259 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 VA QP+KLAAMEG+W+TE AP + P+ + + +A++IP +L +LA + V Sbjct: 260 VAVTQPIKLAAMEGQWETET-YAPLRIGGIPDPETKTTPYAIEIPGMLSVLAYDNPAAEV 318 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 GL + +P +A+ +M I + + G + Sbjct: 319 QGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGKSAWHERR------- 371 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 W ++ G L +L M Sbjct: 372 -----------------------WWLLTLLASGPLTVLAMEAGW---------------- 392 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 +TE GRQPW +Q L T A + + F + + +Y + Sbjct: 393 -----------------TVTEVGRQPWIVQGFLRTKDAVTQAPG--VWFIFAVTMSIYLV 433 Query: 485 FLIAEVYLMQKYARLGPSAMQSEQP 509 + + ++ + P ++ Sbjct: 434 LTVGCISVL-RILAKQPMPEDADVA 457 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 136/509 (26%), Positives = 207/509 (40%), Gaps = 68/509 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L R QFA T H + T+GL L ++E +++ T + +Y D+ +W KLF + Sbjct: 7 ALLLVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTT 66 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A GV TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG +++ Sbjct: 67 AAGVVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGH 126 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H T +VA GS +SA WIL+AN W+ P G D + ++FNP + Sbjct: 127 RVHFFATCMVALGSLVSAFWILSANSWLHTPAGFARAAD-GNFLPVDWLRIIFNPSFPWR 185 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 +H +A + A I A+ AW++LR A F++G + L GD Sbjct: 186 MLHMSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMGLWVIAIVAPLQLLAGDLHGR 245 Query: 244 EVAQVQPVKLAAMEGEWQTEPA--PAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 + QP KLAA+EG WQ PA P + A P+ +RN L IP L + H+ Sbjct: 246 NTLEHQPQKLAAIEGSWQRPPAGEGEPLRLFAIPDMQAQRNRHELAIPRLGSLYLRHNWT 305 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 + GL+ P + A+ M + +L G L Sbjct: 306 GTIAGLREFPRSDLPPVPIVFFAFRAMVGLGLLLIAVGMLSLVLRARGRLYEAR------ 359 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 W R++V +L ML Sbjct: 360 --------------------------WLQRVVVVMAPSGMLAMLCG-------------- 379 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 W +TE GRQP+ + +L T + S L+ +A S + I+ L Sbjct: 380 -------------------WVVTEVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVL 420 Query: 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 Y L ++L+ + R P A + Sbjct: 421 YPLVFGLGLFLLLRVLRRLPHARERGPSP 449 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 126/508 (24%), Positives = 200/508 (39%), Gaps = 79/508 (15%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + SR QF T H +F L++GL + V T + Y + FW K+F Sbjct: 17 LLSPEIASRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFA 76 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 + F +G TG+ M FQFGTN+ ++ G++ G PLA EA MAFFLE+ F+G+ +G +R Sbjct: 77 VGFVMGTVTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRER 136 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNP 178 + ++L + LV G+ LS WIL N WMQ P G ++T P Sbjct: 137 VADRTYVLSSVLVGVGAWLSGFWILVVNAWMQTPRGYEMVTRNGMEVAKLTDPVAAFLTP 196 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 +VH + A ++ A+ + +SA+ + + + + + + V ++ G Sbjct: 197 RMPWMYVHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHG 256 Query: 239 DSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP------EQDQERNAFALKIPALL 292 D+ V QP K AAME ++T A H++A+P + N F + +P + Sbjct: 257 DAYGRHVEDTQPQKFAAMEAHYET--GSADLHLLAFPKSLDALTDPRTENLFTVSLPGIG 314 Query: 293 GILAT-HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL 351 LA+ D V GL P V F + Sbjct: 315 SFLASGGDFDAEVIGLNEYEEN------------------------PPVALVFWSFRFMV 350 Query: 352 GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQT 411 G G L A ++T + + M+ +L Sbjct: 351 GLGFLFIGLALWGGYLTYRGRLTESTRYL----------KSMIAASPFGYAALL------ 394 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQ 470 GW++TE GRQPW IQ L T A S+ LT + Sbjct: 395 ---------------------------TGWYVTEIGRQPWVIQGELKTSEAVSSTLTGTE 427 Query: 471 LAFSLIMIVGLYTLFLIAEVYLMQKYAR 498 +L+ V LY ++ +Y+++ R Sbjct: 428 ATLTLVGFVVLYIALILTALYVLKWLIR 455 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 144/498 (28%), Positives = 211/498 (42%), Gaps = 69/498 (13%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + LSR Q A T +H +F T+GL LA++E + + TG +YR + FW K+FG+ F Sbjct: 5 ALLLSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAF 64 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 +GV +G+ M FQFGTNWS S G I G L E+ AF LE+TF G+ G R+ Sbjct: 65 GMGVVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRP 124 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 + +L LVA G+ +SA WIL N WMQ+P G + + T ++ ++FN V V+ Sbjct: 125 WFYLTSCILVAAGTTMSAFWILVNNSWMQHPVG--YVVQNGIFVPTDWAAIIFNHVVWVR 182 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 F H ++ Y+T A + A+ A YLL+ R R A + + + G + Sbjct: 183 FPHMLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGD 242 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 + QP K AA+EG W T+ PA + A P+ ERN F K+P L ++A+ + D Sbjct: 243 YLHDDQPAKFAAVEGRW-TDEQPAAEVIFAIPDAAHERNRFEWKVPVLGSLIASGTADSR 301 Query: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363 GL + A P VL F G G+++ A Sbjct: 302 EVGLTDFAAADRPP----------------------VLIPFFAFRVMAGCGLIMLALAWA 339 Query: 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423 R + +A F G + +L Sbjct: 340 GTVAARRGRLERRRWLLWPLACSF-------PLGFIAILAG------------------- 373 Query: 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIMIVGLY 482 WF E GRQPW + +L T A + LT A +L + V +Y Sbjct: 374 -----------------WFTAEVGRQPWTVWGVLRTADALTPGLTAHFAAATLALFVAIY 416 Query: 483 TLFLIAEVYLMQKYARLG 500 VY + + R G Sbjct: 417 AFIFCFGVYYIVRIVRRG 434 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 119/509 (23%), Positives = 206/509 (40%), Gaps = 73/509 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +D + SR LT +H ++ + +G+ ++AI + + + Y + R W + F I Sbjct: 4 YDPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVI 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 A+GV TG + Q W + G + PL ME AFF E+ F+G++ + W R Sbjct: 64 TVAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFMET-FAFFFEAIFLGIYLYTWDRF 122 Query: 122 -NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 N+ +HLL+ VA GS+ SA++I N +M P G F + + +FNP Sbjct: 123 ENQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQG--FALKNGEIVNIDPIAAMFNPAM 180 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 K H + Y+T A + +I+AW+LL+G ++ + + I + +GD Sbjct: 181 PTKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGDL 240 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 S +A QP KLAA E ++T + AP E+D +ALKIP L +LA + Sbjct: 241 SGKFLAVYQPEKLAAAEWHFET-SSHAPLVFFGMLEED-GEVKYALKIPYALSVLAHNHP 298 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 V GL ++ + P L + +G ++L Sbjct: 299 GAIVTGLNDIPKDERPPLYIHY---------------------LFDMMVAIGVFLMLVAT 337 Query: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420 A + V ++ W F ++ G L ++ + Sbjct: 338 AYWLGSVFRWKWTTKK-----------WFFGLLAAGGPLSMIAIEAG------------- 373 Query: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480 W++ E GRQPW ++ + T A + ++ + L++ Sbjct: 374 --------------------WYLAEVGRQPWILRGYMKTAEAAT--SSAHVDMMLVLFCL 411 Query: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQP 509 LY + IA V ++ + R P + + Sbjct: 412 LYLVLGIASVIVLVRLFRRNPVERELAEG 440 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 188/355 (52%), Gaps = 4/355 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 L+R QFAL +H+LFVP++LGL ++ +ME +Y+ T K+IY+ +T FW K+F + Sbjct: 1 MSAEILARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTL 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 F +GV TGL F FG NWS ++ Y G++FG L E + AFFLES F+G+ FG ++ Sbjct: 61 TFVVGVVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKV 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTL--RMEMTSFSELVFNPV 179 +K H +VA G+++SA WI+ AN WMQ P+G + +MTSF V +P Sbjct: 121 SKKMHFFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPS 180 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 + +F H V+ +++G ++++SA YL + R ++ A + I L + L D Sbjct: 181 ALQRFTHVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSAD 240 Query: 240 SSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHS 299 +A VA+ QP KLAA EG ++T+ P +++ + +ER + IP+ L +L + Sbjct: 241 VTARGVAKHQPAKLAAFEGVFKTQ-GHTPIYLLGIVDMKKERVI-GIPIPSGLSLLVHRN 298 Query: 300 LDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYG 354 PV GL + +P + + LM + ++ + Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSWSCK 353 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 1/150 (0%) Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 LS + P VA VF ++ +MV +++L+ LIA + Sbjct: 291 LSLLVHRNAKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSW 350 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSL 475 + +L + +S+ P + E GW TE GRQPW + +L T A S + GQ+ SL Sbjct: 351 SCKKGILWILSFSVLCPELCNEIGWISTEVGRQPWVVYGLLKTKDATSPIVNAGQIWQSL 410 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 I+ ++ L V L+ K GP Sbjct: 411 ILFSIIFICLLSVFVSLLLKKIGEGPDEQD 440 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 226/505 (44%), Gaps = 58/505 (11%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYV--VTGKTIYRDMTRFWGKLFGI 61 V +LSR QFA+TA+ HFLFV T+G++ I E +Y Y +T F+ ++F Sbjct: 12 VTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIFFF 71 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F GV TGL MEFQFG NWS ++ +GD+ G PLA+E++++FF+EST +GL+ F W +L Sbjct: 72 SFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWGKL 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H + + S S +WI+ N +MQ P G F ++ R +TS L+ NP + Sbjct: 132 PKRAHAWLGVGMLGASLFSIVWIIAINAFMQNPYG--FRLEGGRARLTSLITLLQNPQYR 189 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 +F+H + A +TG I+AW +L R+ + + IG + A GD Sbjct: 190 PEFLHVLFAILITGGFLTAGIAAWQILHKRDTSAFKIAVQIGLLIALPAAFLQPAQGDDQ 249 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAP---APFHVVAWPEQDQERNAFALKIPALLGILATH 298 A +QP+K A+EG ++TE +P AP+ + A +D A+ IP + + Sbjct: 250 GAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIPNMGTYFGKN 308 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 + +PG+ + + + + Q P V F Sbjct: 309 TFTGTMPGMNAVAKMYHAKFDKTV----AKSYDGQMTYYPPVTLLFW------------- 351 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK--I 416 + +MV G + L A + R + I Sbjct: 352 ------------------------------TMHLMVYAGYFFTMFALFATIMLHRRQSAI 381 Query: 417 DQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSL 475 + H L+ W L LP++ +GW + E GR P+ + +L Y A S +T + SL Sbjct: 382 EDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSVTVTEAGTSL 441 Query: 476 IMIVGLYTLFLIAEVYLMQKYARLG 500 + + + +Y+ + + G Sbjct: 442 ALFLMADIFLVTTMIYISHRTVKRG 466 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 117/509 (22%), Positives = 195/509 (38%), Gaps = 72/509 (14%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R Q + +H + +G+ L + TG Y + R W + G+ FA Sbjct: 18 LVAARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFA 77 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G +G + F+ G W GD+ G P +E AFF+E+ F+G++ + W RL Sbjct: 78 VGAVSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEG-FAFFIEAIFLGIYLYAWDRLPPR 136 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 HLL V SA +++ AN WM P G FD+ + E +FNP + + Sbjct: 137 VHLLTGVPVVLAGVASAFFVVTANAWMNQPRG--FDLVDGEVVGVRPWEAMFNPATPPQT 194 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 VH ++A ++ + ++ A L RGR F + F + + +GD +A+ Sbjct: 195 VHMIVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVPFTFAAVLAPVQVAVGDWAAHF 254 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 + Q QP+KLAA+EG +T P AP + +AL+IP L +LA D V Sbjct: 255 LGQYQPLKLAAIEGLARTAPG-APLSLGGIYT--GGELRYALEIPNALSLLAHWDPDAIV 311 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 GL P + +++ +M I Sbjct: 312 LGLDQAPPRFQPPVNVVHLSFQVMVGIG-------------------------------F 340 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 V + + W G ++ M V Sbjct: 341 ALVLLGIWLGVSWWRRRDLPRSRWFLLASAAAGPAAVVAMEAGWV--------------- 385 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 +TE GRQPW + D+L T A + L L+ ++ +Y + Sbjct: 386 ------------------VTEVGRQPWIVYDVLLTRDAVNPQPG--LWAGLLTVLVVYAV 425 Query: 485 FLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 A V+++++ ARLGP ++ P + Sbjct: 426 LTAATVHVLRRLARLGPVPVRGLAPQEHA 454 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 285 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 142/505 (28%), Positives = 215/505 (42%), Gaps = 75/505 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + LSR QFA H L LT+GL +A +E + TG+ +YR ++ FW ++F + Sbjct: 4 IDALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 +F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG +R+ Sbjct: 64 SFGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRV 123 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ H L LVA G+ LS+ WIL N WMQ P+G F R S ++ +P Sbjct: 124 PQWAHALAAALVALGTLLSSFWILAVNSWMQTPSGYRFV--DGRFYPESIVAVLLSPSFP 181 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + HTV+A VT A ++ A YLL R + + + F +A+ Sbjct: 182 YRLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKMALGFLAIAV---------- 231 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVV---AWPEQDQERNAFALKIPALLGILATH 298 PV++A + A P + + + A IP Sbjct: 232 --------PVQIALGDAHGLNTLAHQPVKLAAMEGLWDTGRGVRATLFAIP--------- 274 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 A +L L S Sbjct: 275 ------------------------------------------DGARETNRFELAIPTLGS 292 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 Y + + R P VA VF++FR+MVG G ++L +++ L G++ Sbjct: 293 LYLTHDPNGLVRGLKDWPRDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTLWRGGRLYV 352 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-LTTGQLAFSLIM 477 R L + P+ ++A+ AGW TE GRQPW + ++ T + + LTT +A SL Sbjct: 353 RRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTTTDVALSLAA 412 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPS 502 V Y A L+ + RLGP Sbjct: 413 YVLCYLAMFGAGFVLLLRLVRLGPP 437 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 115/508 (22%), Positives = 199/508 (39%), Gaps = 75/508 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R F T +H +F L +GL ++ + E IY T Y M + W K + Sbjct: 1 MDDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + + TG Q W + +G + P +E + AFF+E+ F+ ++ + RL Sbjct: 61 LLGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + ++ + V G+ SA+ I N + + P G F I ++ FNP Sbjct: 120 SPAMRIVAVFFVLVGAAASAVLITNVHAFEGTPAG--FKILNGKITDVDPWAAFFNPSFF 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN----VALRSFAIGSVFGTLAIIGTLQL 237 + H V++ ++TGA + +++A+ ++R R++ ++ + G + + T Sbjct: 178 ITAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN 237 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G SA + + QP KLA EG ++T + AP + + + ++E+ +A++IP L LA Sbjct: 238 GHESAQMLYEYQPEKLAGAEGLFET-RSHAPLAIGGFTDPNEEKVKWAIEIPWALSFLAA 296 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 + D V GL + +P L + +G GMLL Sbjct: 297 NRFDTVVKGLNAFPRDEWPPLFIHTL-----------------------FNAMVGVGMLL 333 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 Y + + + + P W I + G L Sbjct: 334 ILY----SIIGVVWRKVLKKDRFPT-----WLLIIFMTAGPFSL---------------- 368 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 I IE GW GRQPW I +L T + TTG + + Sbjct: 369 -----------------IGIEFGWIFACTGRQPWVIYHLLKTSDVVT--TTGSIGVLFLF 409 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 +Y + A VY++ Y R P Sbjct: 410 FTFVYAVLGAAVVYVLLYYFRKHPVDED 437 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 116/500 (23%), Positives = 199/500 (39%), Gaps = 70/500 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + + +R Q L+ +H +F + L ++ I + ++ TG Y + ++ K I Sbjct: 1 MNSLLYARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + G++ G P ++E AFF E+ F+G++ +G +L Sbjct: 61 LFAVGAVSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEG-FAFFTEAIFLGIYLYGRGKL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HLL LVA LSA +++ N M P G F + R +F+P + Sbjct: 120 SPRLHLLSGALVALSGALSAFFVILVNACMNDPAG--FTMVDGRPANIDPVAAMFSPPWK 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +H ++A Y A + I A LLR + ++FA+ + + +G + Sbjct: 178 HETLHGILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAVTLAIAGVTALAQPLVGHYA 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A EV + QP KLAAME ++T A AP V P+ ++ +A++IPA L + D Sbjct: 238 AVEVGRGQPAKLAAMEAHFET-SARAPLLVGGLPDVERGEVDYAIEIPAGLSVFLHADPD 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 V GL + + +P + +++ +M V+ A Sbjct: 297 AVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAVVGAVL---------------- 340 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 A R IP P W+ + L ++ M + Sbjct: 341 ------------AWRRRGIPDQRPFLWA---AILASPLGIVAMEAGWL------------ 373 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 +TE GRQPW ++ + T A + LA L Sbjct: 374 ---------------------VTELGRQPWIVRGAMRTRDAVTPFP--HLAAPFWTFTAL 410 Query: 482 YTLFLIAEVYLMQKYARLGP 501 Y + VYL+ + R P Sbjct: 411 YVFLGVVVVYLLVRQLRAAP 430 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 115/492 (23%), Positives = 184/492 (37%), Gaps = 65/492 (13%) Query: 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64 + +R A T H L VP + L F+ +M + + + R W + + FA Sbjct: 16 LLPARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFA 75 Query: 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124 +G+ TG + F+FG W GD+FG +EA AFFLE+ + ++ +GW+RL + Sbjct: 76 IGIITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPW 134 Query: 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184 H + + + + A I+ AN WM P G D + + +F P+ ++ Sbjct: 135 THFWLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQ-GKPIHVDVRQAIFTPMFGPEY 193 Query: 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYE 244 H V+A +T + + A LRGR F + + LGDS+A Sbjct: 194 WHFVVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTLPFTVAAILTPVQFMLGDSAARA 253 Query: 245 VAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPV 304 V QP+K AA E W+T+ P ++ D + LKIP L ILA V Sbjct: 254 VFHKQPIKFAATEIVWKTDT-HVPEYMFGRLNSD-GTISGGLKIPQLDSILAGFKPSTQV 311 Query: 305 PGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDM 364 GL ++ A P + +A + + G LL Sbjct: 312 TGLTSVPASDRPTAVQATIAH-------------------WAFDIMVTIGSLL------- 345 Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 + A + A W +R G L Sbjct: 346 --ILLALWYAWSWWRHRDNPGSRWFYRCAALAGLACL----------------------- 380 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 + +E GW TE GRQPW + + A ++ G L L ++V +Y Sbjct: 381 ----------VTVECGWITTEVGRQPWIVYQHMRVSEAVTSTRAGSLWAMLGIVVVVYVA 430 Query: 485 FLIAEVYLMQKY 496 + A + ++ K Sbjct: 431 VIGAFLAVVLKM 442 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 109/468 (23%), Positives = 178/468 (38%), Gaps = 68/468 (14%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 A + +H +F L +G+ LLA + +++ T Y + + W + + FA+G +G Sbjct: 1 MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT 60 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + F+ G W + ++ G G +E AFF E+ F+GL+ +G +R+ H L Sbjct: 61 GIAFELGLLWPEFMHFAGSTVGPAFTLEG-YAFFTEAIFIGLYLYGRERMRPVAHWLTAV 119 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 VA S+ + AN W Q P G D+ E + + NP V VH+ +A Sbjct: 120 AVAVSGAASSFLVTAANAWQQNPVG--VDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIAC 177 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPV 251 Y + + AW +LRGR + ++ I G +A + GD SA VA+ QP Sbjct: 178 YAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPE 237 Query: 252 KLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLM 311 KLAAME + T+ A AP + P ++ A+ +P LL LA LD V GL + Sbjct: 238 KLAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVP 296 Query: 312 AETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQ 371 + +P + +++ LM + Sbjct: 297 RQEWPNVPLVHISFQLMVGAGIAMVLVGLY------------------------------ 326 Query: 372 YQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLP 431 Y QV ++V L L + Sbjct: 327 YAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGW----------------------- 363 Query: 432 LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479 ++E GRQPW I ++ T A + + +A S+ Sbjct: 364 ----------IVSETGRQPWTIWKVMLTADAVTP-SGSTMALSMAGFT 400 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 118/516 (22%), Positives = 201/516 (38%), Gaps = 73/516 (14%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R F + +H +F L +G+ ++ + E + ++ Y + + W K I Sbjct: 1 MDNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 + + +G + W Y VG + P +E + AFF+E+ F+ ++ + RL Sbjct: 61 LLGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + ++ + VA G+ SA+ I +A+ WM P G FD + E VFNP Sbjct: 120 SPTMRIITVFFVALGATASAVLITDAHAWMNTPRG--FDYVDGVVSNVRPLEAVFNPSIY 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG----RERNVALRSFAIGSVFGTLAIIGTLQL 237 V +H + + Y+TGA + +++A+ L RG RE + + + T Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLMLSLGVALVMSFYTANN 237 Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 G +A + + PVKLAA EG ++T+ AP ++ P+ + R ++IP +L LAT Sbjct: 238 GHDTAIMLHEEIPVKLAAAEGLFETQ-DNAPLAILGTPDPEAGRVIGGIEIPGMLSWLAT 296 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLL 357 S D V GL + + +P L + +G G +L Sbjct: 297 GSTDGVVQGLNDFPRDEWPPLFVHTL-----------------------FNVMVGIGTVL 333 Query: 358 SRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID 417 A + + Q A W ++ CG L + Sbjct: 334 LGLAGIFWVIWFLGRKK-------QKAFPKWLLGALILCGPLSM---------------- 370 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIM 477 I IE GW + GRQPW I + T A + +G L + Sbjct: 371 -----------------IGIETGWIFSCTGRQPWTIFGVQRTAEAATN--SGNLGMLFFL 411 Query: 478 IVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 + LY L+ +M Y + P + T Sbjct: 412 FLTLYLSLLVLTGLVMYFYFKRNPVTHELHSTTPTA 447 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 107/428 (25%), Positives = 180/428 (42%), Gaps = 9/428 (2%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + +R ++ +H ++ + +GL LL + E + + TG + ++ R W + + Sbjct: 1 MDDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G +G + F+ G W + + G + G +ME AFF E+ F+ L+ +G QRL Sbjct: 61 LFAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEG-FAFFTEAIFLALYSYGEQRL 119 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 ++ T + S +SA+++++ANGWM P+G F + N Sbjct: 120 SRRAQFFCTVPMVVASAISAVFVISANGWMNTPSG--FRMVNGVASDIHPLVAFANQAWP 177 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + VH A YV + A LLRGR+ ++ + GTLA+ L GD + Sbjct: 178 HQAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPLMLMSGDWA 237 Query: 242 AYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301 A +A+ Q KLAA E ++T A AP + WP+ + +A+KIP LL LA + Sbjct: 238 AEALAEHQKAKLAAAEAHFKTMAA-APLVIGGWPDPETGTVRYAIKIPKLLSYLANGDAN 296 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL-----GYGML 356 V GL + P + + LM S + G +L Sbjct: 297 SVVQGLDAFPLGSTPDPRIVHPFFDLMVGSSFVMAAAAAWFWWLRWREKEVTLKRGALIL 356 Query: 357 LSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI 416 + AP + + G P + + V LLL+ L+ L + Sbjct: 357 VLIAAPFGMIALESGWMVTEFGRQPWIIQGYLRTSEAVTPNGGLLLIFATFLMVYLALSV 416 Query: 417 DQHRWVLK 424 R +L+ Sbjct: 417 GILRLLLR 424 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 76/222 (34%), Gaps = 7/222 (3%) Query: 275 PEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG 334 Q ++ +L + L L S D L + + G Sbjct: 209 TTQVKKALTLSLAVGTLALPLMLMSGDWAAEALAEHQKAKLAAAEAHFKTMAAAPLVIGG 268 Query: 335 NREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMV 394 +P ++ LLS A + A G+ P V F +MV Sbjct: 269 WPDPETGTVRYAIKIP----KLLSYLANGDANSVVQGLDAFPLGSTPDPRIVHPFFDLMV 324 Query: 395 GCGSLLLLVMLIALVQTLRGK-IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI 453 G ++ R K + R L + L + P IA+E+GW +TEFGRQPW I Sbjct: 325 GSSFVMAAAAAWFWWLRWREKEVTLKRGALILVLIAAPFGMIALESGWMVTEFGRQPWII 384 Query: 454 QDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQK 495 Q L T A + G L + +Y + + L+ + Sbjct: 385 QGYLRTSEAVTPN--GGLLLIFATFLMVYLALSVGILRLLLR 424 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 16/317 (5%) Query: 186 HTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 HTV ++T +F M + A+YL++ R +A F + F +A I + +GD YEV Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 AQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVP 305 A QP+KLA +EG+++TE A + +Q+ +++ LKIP LL L+ H + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMN 365 G+ L+ + + + ++++ Q + P Q + L + + Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQAQTPEEKQKI---KDQLAEAKVKAH------ 170 Query: 366 HVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKM 425 +P + VF +F +MV G +L+ L+A +G +++H+ L + Sbjct: 171 ------AFNIKYEDLPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKGFLWL 224 Query: 426 ALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLF 485 + S+PLP++A GW E GRQPW + +L T S + Q+A S+ + +YT+F Sbjct: 225 LVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTIYTIF 284 Query: 486 LIAEVYLMQKYARLGPS 502 I +YL+ K GP+ Sbjct: 285 FIVFLYLIFKTIGKGPN 301 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 100/504 (19%), Positives = 199/504 (39%), Gaps = 49/504 (9%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M +++ + H L V + + L +++I E + + +Y + + Sbjct: 1 MVNLVLFDAGLMGYSLAVHILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALI 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I FA+G A+G+ + + W + + +G + PL ME + AFF E+ F+G++ + W + Sbjct: 61 IFFAVGTASGVVVAIELFVLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNK 119 Query: 121 L-NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA--HFDIDTLRMEMTSFSELVFN 177 ++ +H L++ +A G+ +S ++I N +M P G + + T ++ + ++ Sbjct: 120 FKSRMKHWLLSVFIAIGAVMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNT 179 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR--ERNVALRSFAIGSVFGTLAIIGTL 235 P + V+ H + + GA F +A A+ LL+ + ER ++ I + ++II T+ Sbjct: 180 PTTWVEIGHVIGSTIFAGAAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTV 239 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGIL 295 +G S ++ QP K AA+E + + P A + ++ IP L+ L Sbjct: 240 IIGIESITDLMLYQPEKFAALEMNFNSGPHVAEVI---GGFLVNNKTVDSINIPGLMSFL 296 Query: 296 ATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGM 355 AT S + + +L A + P V + +G G+ Sbjct: 297 ATGSFNGAIASNDSLAAY-------------------PKSTWPPVAVVHNTFDIMVGIGV 337 Query: 356 LLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGK 415 L+ + + L + Sbjct: 338 LIGVVMIIFLLIWLLNIRKIRDKFESNH-------------------FFNKILSNKIFSD 378 Query: 416 IDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSL 475 + VLK + L +E GW E GRQPW I +++ +A + T+ + Sbjct: 379 PFDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAAAN--TSPSIVPIG 436 Query: 476 IMIVGLYTLFLIAEVYLMQKYARL 499 I I+ Y + L A + ++ + Sbjct: 437 IAIIAFYIVVLPATLLFVRNVIKK 460 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 118/521 (22%), Positives = 190/521 (36%), Gaps = 80/521 (15%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + LSR LT +H +F + +G+ ++ E I + + Y + R W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 A+GV TG + Q W G PL ME AFF E+ F+G++ + W R Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFMET-FAFFFEAIFLGIYLYTWDRFK 122 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N + H L+ V G+ LSA +I N +M P G F I + + +FN + Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSPEG--FKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR-----ERNVALRSFAIGSVFGTLAIIGTLQ 236 K H +++ Y+T A + AI+A++LLR + E ++ + + G + T Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQE---RNAFALKIPALLG 293 +GD S +A+ QP KLAA E ++T A ++ + A+KIP L Sbjct: 241 VGDFSGKYLAKYQPEKLAAAEWHFETTNE-AELIFGGILDEQADGSYEIKGAVKIPYALS 299 Query: 294 ILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGY 353 ILA + D V GL E L + +M I L Sbjct: 300 ILAGGAPDTEVIGLNEFAKEDQAPLF-VHYFFDIMVSIGMYLAAISALFI---------L 349 Query: 354 GMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLR 413 L + P W R + G L ++ + Sbjct: 350 AFRLKKLNPYNK----------------------WLLRGIFIGGPLAIVSIEAGW----- 382 Query: 414 GKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAF 473 E GRQPW + I+ T A T+ + Sbjct: 383 ----------------------------MYAEIGRQPWTLYGIMRTADAA--TTSTAVGP 412 Query: 474 SLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514 LI+ LY L ++ + + P + +G Sbjct: 413 MLILFSLLYLLLGTICTVVLLRMFKNNPVGKELADDHHTRG 453 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 108/248 (43%), Positives = 150/248 (60%), Gaps = 4/248 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 DV+DL+R QF +TA HFLFV LTLGL ++A+M T +V TG + MTRFWG+++ + Sbjct: 1 MDVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIV 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 N+ALG+ TGL MEFQFG +WS ++Y GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 61 NYALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 + HL W+V + SA WI+ AN ++Q P GA R+ +T L+ N Sbjct: 121 PRRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVT--GDRLALTDAGALLTNKALV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLR--GRERNVALRSFAIGSVFGTLAIIGTLQLGD 239 F H + AG TGA ++ SA+ L R G +R + RS G V + + G Sbjct: 179 FSFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVLAVHGVPIAVAFGF 238 Query: 240 SSAYEVAQ 247 + V + Sbjct: 239 AQFATVPE 246 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 2/156 (1%) Query: 345 RGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVM 404 L G++L+ + + A + A +M+ G LL+ Sbjct: 213 ELFTRSLRTGVVLAVHGVPIAVAFGFAQFATVPEGKFDGAAASTGLGVMILIGEALLMAT 272 Query: 405 LIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHS 464 L+ L+ ++ + RW + + PLP+ A GW E GR PW I+D L A S Sbjct: 273 LLFLLPLIK-VLPHWRWTHPLLMALTPLPFAAAILGWIAREMGRYPWMIRDRLTVADALS 331 Query: 465 A-LTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARL 499 LT G + SL + TL + + L+ K R Sbjct: 332 PGLTPGMITASLAGFTTVLTLLAVIDYALIAKIVRR 367 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 101/417 (24%), Positives = 171/417 (41%), Gaps = 69/417 (16%) Query: 96 LAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT 155 E L AFF+E+ +G+ FGW R+NKY H L + + G LSA WIL+AN WMQ P Sbjct: 2 FTYEVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTPD 61 Query: 156 GAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV 215 G ++ + E+ S+ ++FNP +++H +MA Y++ M I+ +SA+YL++ + + Sbjct: 62 GVNYV--NSKFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSF 119 Query: 216 ALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWP 275 A + + I L +GD EV + QP+K AA+EG W T+ AP + A+P Sbjct: 120 AKTCIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYP 178 Query: 276 EQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGN 335 + QE+N FA++IP L ++ TH LD + GLK++ + P + ++ +M I Sbjct: 179 SEAQEKNLFAIEIPKLASLINTHELDGELIGLKSVPEKDRPVVAVVFYSFRIMVGIGTLM 238 Query: 336 REPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVG 395 ++ + W ++ Sbjct: 239 ILIGLVGTLLLARKKIES--------------------------------SKWFLKLCTL 266 Query: 396 CGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQD 455 L + + G+ W + + Sbjct: 267 TTPLGFVATITGWFTAEFGRQP---------------------------------WVVYN 293 Query: 456 ILPTYSAHSALTTGQLAFSLIMIVGLYTLFLI-AEVYLMQKYARLGPSAMQSEQPTQ 511 IL T + S L+ Q+ SL I+ +Y + + + GPS E+ Sbjct: 294 ILRTEYSVSDLSFWQVFSSLASIIIVYFIIFGYFYFKYLFRIINGGPSTDGEERMPY 350 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 111/264 (42%), Positives = 163/264 (61%), Gaps = 2/264 (0%) Query: 251 VKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNL 310 +KLAA+E EW+T+PAPA F ++ P Q +ER +A+KIP LG++AT S+D+PV GL+ L Sbjct: 1 MKLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLREL 60 Query: 311 MAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAA 370 + +Q G +A+ +Q+I QG+ F + LGYG++L ++ P++ T Sbjct: 61 AKLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPE 120 Query: 371 QYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKI--DQHRWVLKMALW 428 Q +AA + IP VAPVF+SFRIMV G L + + A R ++ D RW L+ A+W Sbjct: 121 QIKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVW 180 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIA 488 ++PLPWIAIE GW + E GRQPW I +LPT+ + S+L L SL + YT + Sbjct: 181 AIPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVI 240 Query: 489 EVYLMQKYARLGPSAMQSEQPTQQ 512 E+ LM KYARLGPS++ + + + Sbjct: 241 EIKLMFKYARLGPSSLHTGRYHHE 264 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 104/516 (20%), Positives = 175/516 (33%), Gaps = 89/516 (17%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVAT 69 FA T H L V L++GL + I E + + Y + K I FA+G A+ Sbjct: 15 AMFAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTAS 74 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLL 128 G M + W + VG++ P +E + +F LE+ + ++ + W+ N+++H Sbjct: 75 GTVMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWG 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFD--IDTLRMEMTSFSELVFNPVSQVKFVH 186 ++ V G+ LSA + N WM P G + T + + + + +H Sbjct: 134 LSLAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFITASTAAEELH 193 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRE---RNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 A Y G I+ + L+ + + R I +VF L II G + Sbjct: 194 MSGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVFMILDIIYLGITGSNELS 253 Query: 244 EVAQVQPVKLAAMEGEWQTEPAP-----APFHVVAWPEQDQERNAFALKIPALLGILATH 298 + ++P+K A+E + AP H+ + A+A P + +LA Sbjct: 254 TLMVIEPIKYTALELDLHATIGTSFATMAPEHIFGVL--INHKLAYAPSFPYIQSLLAF- 310 Query: 299 SLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLS 358 ++ G L +G YG Sbjct: 311 -------------------------------PLTFGKGSIPGLIPLTTYKGVTDYG---- 335 Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKID- 417 + V + +MVG G L+ L L +VQ R K Sbjct: 336 ---------------------VWPPYIVHDTLDLMVGFGVLMGLYWLYVVVQYFRKKDPL 374 Query: 418 QHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI---------------QDILPTYSA 462 HR+ L + + +E GW+ E GR P+ I + A Sbjct: 375 SHRFTLLGGIAVAIMGVFTMEDGWYTAEVGRVPYIIRSPVPGGFVVDGVKHYGTMTIAQA 434 Query: 463 HSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYAR 498 S T+ + I I+ Y Y K + Sbjct: 435 AS--TSPLVFPLGIAIIIFYLAVFPLTFYFAGKVMK 468 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 108/260 (41%), Positives = 149/260 (57%), Gaps = 8/260 (3%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI----YRDMTRFWGK 57 D++DL+R QFA+T H+LFV LTLGL+ L+AIM+T + + MTRFWG+ Sbjct: 1 MDILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 ++ IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FG Sbjct: 61 IYVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W RL H+ + WLV + SA W+L ANG+MQ P G+ +T F L+ N Sbjct: 121 WDRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVV--RDGVAYLTDFGALLTN 178 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P + V H +A +TG +F+ +SA +L RGRE G + + Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGRED--FRGPLRTGVLVAAVVTFPVYAA 236 Query: 238 GDSSAYEVAQVQPVKLAAME 257 G +A QP K A M+ Sbjct: 237 GGLQYPIIAATQPAKTAMMD 256 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 161/273 (58%), Gaps = 6/273 (2%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + +DL+R QFALTA HFLFV LTLGL L+A+M+T +TG ++ MTRFWG+L+ I Sbjct: 1 METLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVI 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 N+A+G+ TGL MEFQFG W+ +++ G++ GA LAME L+AFF+ESTF+GL+ FGW RL Sbjct: 61 NYAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRL 120 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 N++ HL V W+V + SA WI+ +NG++Q P GA + +T + ++ NP + Sbjct: 121 NRWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEVA--GGVLRLTDAAAVLANPAAI 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRGR-ERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 F H + + F+ +SA +L +G E+ RS IG A++ T LG Sbjct: 179 TAFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALG-- 236 Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVA 273 + QP+K+A G + V A Sbjct: 237 -GAQFDTAQPMKIAVYAGRTEEVARLQAEMVAA 268 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 1/221 (0%) Query: 293 GILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLG 352 +L V R + + + + A + Sbjct: 188 ALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALGGAQFDTAQPMK 247 Query: 353 YGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLI-ALVQT 411 + R IP V S M+ +L++ V + AL+ Sbjct: 248 IAVYAGRTEEVARLQAEMVAAHGPGDYIPPAGLVQGSGTAMMIIFALMMAVAWLSALLAL 307 Query: 412 LRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQL 471 + + R + +PLP+ A+ AGW E GRQPW + +L T A S L+ G + Sbjct: 308 FPRAVHRLRIWHVLLTAMIPLPFAAMLAGWVFREVGRQPWTVYGLLTTEDALSDLSPGAI 367 Query: 472 AFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQ 512 FSL L+ L ++ +L+ + AR GP + + + Sbjct: 368 RFSLAAFTLLFGLLVVVNTWLLARNARQGPVDTAAAPASAE 408 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 95/497 (19%), Positives = 179/497 (36%), Gaps = 66/497 (13%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVAT 69 FA T H LFV L++ L + I E + + Y + K I FA+G A+ Sbjct: 11 AMFAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTAS 70 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-NKYQHLL 128 G M + W + VG + P +E + +F LE+ + ++ + W+ N+++H Sbjct: 71 GTVMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWA 129 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAH--FDIDTLRMEMTSFSELVFNPVSQVKFVH 186 ++ V G+ LSA + N WM P G + + + ++ + + P + + +H Sbjct: 130 LSLAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELH 189 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRE---RNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 A Y G + I+ A+ L+ + V R I +VF L II G + Sbjct: 190 MSGAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVFAILDIIYLGATGSNELS 249 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL--D 301 + ++P+K AA+E + AP H+ A+ + +P +LA Sbjct: 250 TLLVIEPLKYAALEQDMVPVTYGAPEHIFGVI--INGHPAYYVNLPLAQSLLAYPFTFGH 307 Query: 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361 +PGL + + +P L+ +G+G+L+ + Sbjct: 308 GYIPGLSSYPSSVWPPSFVH-----------------------DTLDLMVGFGILMGFFW 344 Query: 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421 + + + R I ++ + L +L M G++ Sbjct: 345 LIVVIMYFMKKDPLSRPLI---------LKLTMAVAVLGVLTMEDGWYTAEVGRVP---- 391 Query: 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481 + P+ I + ++ A S T+ + I I+ Sbjct: 392 ----FIIKAPVGGTGIPG-------------VYGVMTIGQAAS--TSPVVFPLGIAIIIF 432 Query: 482 YTLFLIAEVYLMQKYAR 498 Y + L Y K + Sbjct: 433 YIVLLPLTFYYAFKVMK 449 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 175/508 (34%), Gaps = 77/508 (15%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ R FA + H L V +++GL +L ++E I + Y +TR K + Sbjct: 1 MNIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYIAIKYKDVYYDLLTRRVAKALVM 60 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL 121 FA+G A+G M + + + + + P E + AFFLE+ + +++ W Sbjct: 61 FFAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDVF 119 Query: 122 -NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA--HFDIDTLRMEMTSFSELVFNP 178 N+ H L+T+ VA G+ SA++I N WM P G + T ++ + P Sbjct: 120 KNRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFITALTP 179 Query: 179 VSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNV---ALRSFAIGSVFGTLAIIGTL 235 + + H V+ G M + A A+ LR + ++ + II Sbjct: 180 STGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKTEEAKTLYMKGLKVTFPMNMFLIIMAG 239 Query: 236 QLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQER--NAFALKIPALLG 293 G + QP K AA++ AP H+ + +KIP + Sbjct: 240 LSGTLEMSGLLTYQPEKYAALDLNPYPIARDAPEHLFGTIVEKNGHYYVLGGIKIPFVQS 299 Query: 294 ILA-THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLG 352 +LA +L+ PVPGL T+P L L++ + + L+ Sbjct: 300 LLAGNGNLNTPVPGLSQFPTSTWPPLAVHDTFDLMVIGGTLLGLFLLSVLIAWILKKK-- 357 Query: 353 YGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTL 412 + S MV +L + I + + Sbjct: 358 ---------------------------------PYESKGFMVAQILFAILTIPIYIGGWV 384 Query: 413 RGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLA 472 ++ + W I +++ Y A + + + Sbjct: 385 TDEVGRQPW------------------------------IIYNVMTVYQAANY--SPSII 412 Query: 473 FSLIMIVGLYTLFLIAEVYLMQKYARLG 500 +I+ YT+ + + + + G Sbjct: 413 VPGYLIMAFYTILMPFSYWYAFRLMKQG 440 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 107/255 (41%), Positives = 158/255 (61%), Gaps = 5/255 (1%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYR----DMTRFWGK 57 +D++R QFA+T H++FV +TLGL+ +L ++T +T + R MTR+WG Sbjct: 1 MTAVDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGL 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFG 117 ++ IN+++G+A+G+ MEFQFGTNWS S+ VGD+FGAPLA+E L+AF ESTF+ L+ FG Sbjct: 61 IYVINYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFG 120 Query: 118 WQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 W +L + H L+ WLVA + SA W+L ANG+MQ PTG D R +TS + L N Sbjct: 121 WGKLPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNN 179 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P + FVH + A G + ++ +SA +L R +E++ RSF +G + G +I Sbjct: 180 PSTIWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGLFGMIWAFGT 239 Query: 238 GDSSAYEVAQVQPVK 252 G + V Q+QP K Sbjct: 240 GWAQYGFVNQIQPAK 254 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 2/117 (1%) Query: 389 SFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALW-SLPLPWIAIEAGWFMTEFG 447 +F IM+ L +ML+ L + K+ W W +LP P+ A AGW E G Sbjct: 265 AFHIMMLTAELATPIMLL-LSPIVIWKLPAKLWFFMPLFWLALPFPFAAAIAGWVFREMG 323 Query: 448 RQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAM 504 RQPW + + T A S + L S + L L L+ +L+ ++A GP+ Sbjct: 324 RQPWIVYGVQKTEDAVSDIGVTTLWTSFWLFTVLLGLLLLTNWWLITRHAVRGPNRE 380 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 87/254 (34%), Positives = 131/254 (51%), Gaps = 3/254 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 + D + L+R QFALTA H++FV LTLGL L + + + G RFWG L+ Sbjct: 2 LEDPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYL 61 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +N+ +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGW R Sbjct: 62 VNYGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDR 121 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 + ++ HL +V + SA W+L +NG+++ P G F++ +T L+ NP + Sbjct: 122 MGRWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAA 179 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRE-RNVALRSFAIGSVFGTLAIIGTLQLGD 239 + F H V + GA+ + A SA++L+R + V R ++ + I G Sbjct: 180 VLAFGHIVTGSLLVGALVVAATSAYHLVRRDDAHGVFRRGIRHATLVLCVVPIPVAAFGG 239 Query: 240 SSAYEVAQVQPVKL 253 Q P Sbjct: 240 VQFGLFGQDPPTSG 253 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 50/112 (44%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M+ +L+ L+ + L+ G +D+ RW L + + LP++A GW E RQPW Sbjct: 284 VMMTSWALVFLLGPLMLLAWPLGGLDRWRWFLAPLVVTPFLPYLASVGGWVFRETNRQPW 343 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSA 503 + L T A + L+ S + +L+ +YAR GP Sbjct: 344 TVVHHLTTADAVTPLSPVAAVASFGFFTAAFAALAAVTYWLLVRYARRGPEG 395 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 104/567 (18%), Positives = 179/567 (31%), Gaps = 102/567 (17%) Query: 6 DLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL 65 +L R AL +H +++ LT GL + +M + TG +Y R + +NFAL Sbjct: 65 NLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLAVNFAL 124 Query: 66 GVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQ 125 G TG +EF W + + PLA+E L+AF E F+ LF R+ Sbjct: 125 GAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGRVRPPV 183 Query: 126 HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD------------------------- 160 + + A + LS + I N WMQ P G Sbjct: 184 SIAILAAYAGFAYLSGVLITTVNSWMQAPWGVGPVAKALYPFMPEYGPNVVDVQKLVALK 243 Query: 161 -------------------IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMA 201 +T+ + + + +++P + V H ++A + G A Sbjct: 244 LAAVATGSPISLIIEKPGFAETVGIVLKDPNVALYSPYALVSMFHNILAAILIGMAVATA 303 Query: 202 ISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQ 261 A+ + + F + +I + V + P K A MEG Sbjct: 304 GWAYKYFKTGNEEYLKIVKPLAGAFAVIFVIQAPIVAHFMGEMVVEYNPTKFALMEGAVT 363 Query: 262 TEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRG 321 T P ++ ++A +KP+ G Sbjct: 364 TFNDP------------------------IIALVAYGDPNKPIVGFDQFEKACLSHGN-- 397 Query: 322 RMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIP 381 + ++++ P VLQ G L + +P Sbjct: 398 ----ATVGDLAKTLGIPTVLQLAGQTVDLNGIASLKLSDLCLAD-------LQKAMSYMP 446 Query: 382 QVAPVFWSFRIMVGCGSLLLLVMLIALV----------QTLRGKIDQHRWVLKMALWSLP 431 V ++ G L V+L R D+ R V +AL + Sbjct: 447 LVHTTYYVKVAFAIIGGLAAAVLLFYFYKVPGLSSLAAAIARILGDERRRVFILALLLVL 506 Query: 432 LPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALT----TGQLAFSLIMIVGL-YTLFL 486 I GW + E GR+PW + +L + + G LA + ++I+ + Sbjct: 507 GTVIPAVGGWAVREIGRKPWTVYGLLYPSEVVTPVPYATSPGFLAVTYLVILAVNLGGLF 566 Query: 487 IAEV-----YLMQKYARLGPSAMQSEQ 508 + Y + + G +SE Sbjct: 567 AMYLVATREYKFLELLKRGAGVEKSES 593 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 3/243 (1%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 D + +R QFALT+ H++FV TLG+ L+ + + ++ RFWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + +GV +GL ME Q NWS ++ G +F APLA+E + AFF ESTF+GL+ FGW R+N Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 ++ HL +V + LSA W+L ANG+++ P G F + +T LV NP + + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERN-VALRSFAIGSVFGTLAIIGTLQLGDSS 241 F H + + G + + +SA++L RG + + + R G V +LA+ T G + Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFPTPAAGGAQ 241 Query: 242 AYE 244 Sbjct: 242 YSL 244 Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 56/119 (47%) Query: 392 IMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPW 451 +M C ++ LV+ +AL+ L ++D+ RW+ + L +A AGW E GRQPW Sbjct: 281 VMTLCWTVFFLVLPVALLAWLVRRLDRWRWLHWLLSVMPVLALLAGVAGWLYRELGRQPW 340 Query: 452 AIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPT 510 A+ + T A + L+ S ++ G + + +L+ +YAR GP Sbjct: 341 AVWHHMTTAEAITPLSVPHAVASFVVFTGAFAVLAGITWWLLVRYARRGPHGGPLAPAP 399 >UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ62_DESAD Length = 821 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 18/272 (6%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATG 70 A+ A H +G L + E + T D + K F + G TG Sbjct: 17 IAVIATIHVFVAQFAVGGGLFLVVTEKLAYKTESGELLDYVKKHSKFFLLLTMVFGGGTG 76 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + + F + + F A E + F E + ++++ W ++N+ HL++ Sbjct: 77 VALWFTMALLSPQGTLVLVREFLFAWATEWVW-FVGEIVALLIYYYYWDKMNRRDHLIIG 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 W + LS I +M P + E SF + +FNP Sbjct: 136 WFYFIFAFLSLFTINGVVSFMLTP--------GVWEETRSFWDAIFNPTFWPALFFRTAL 187 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQP 250 + +F +A R +++++ ++ ++ T+ G + Q Sbjct: 188 CGMLAGLFGFVTAA----RIKDKDLRCMLVRFCGIWTLTGLVLTVFSGYWYMGSIPAEQI 243 Query: 251 V----KLAAMEGEWQTEPAPAPFHVVAWPEQD 278 + K + + AP + Sbjct: 244 MLVVHKSHRVAYFMEVFKYTAPVLLFGGLFMA 275 >UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C6_DESRD Length = 897 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 16/262 (6%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATG 70 AL A+ H +G L + E + TR K F + G TG Sbjct: 17 IALMAIVHVFVAHFAVGGGLFLVLTERKAYRENSKSILEYTRKHAKFFLLLTMVFGGLTG 76 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + + F ++ + F A E + F +E + ++F+ + ++++ +HL V Sbjct: 77 VGIWFTISVLSPGATSVLIHNFLYGWATEWVF-FVVEIVALFVYFYTFGKMDQQRHLTVG 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 W+ + S I +M P ++ +F FNP V Sbjct: 136 WIYFGAAWASLFLINGIIAFMLTP--------GEWLQTGNFWHGFFNPTFWSSLVFRTFM 187 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQP 250 V +F + + +++ + + + + ++ + G V + P Sbjct: 188 AIVLAGVFGFVTATFM----KDQQARAQLIRYNARWLLVPMVFLVASGWWYLQSVPE--P 241 Query: 251 VKLAAMEGEWQTEPAPAPFHVV 272 + ++ + P F + Sbjct: 242 ARELILDRSPELVPYFKAFLWL 263 Score = 41.6 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 87/339 (25%), Gaps = 53/339 (15%) Query: 151 MQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG 210 M YP F P++ + VH +A + G + ++ R Sbjct: 1 MNYPVWELFAAGGGL------------PIALMAIVHVFVAHFAVGGGLFLVLTERKAYRE 48 Query: 211 RER---NVALRSFAIGSVFGTLAIIGTLQLGDSS-------AYEVAQVQPVKLAAMEGEW 260 + + + + T + A V + A E + Sbjct: 49 NSKSILEYTRKHAKFFLLLTMVFGGLTGVGIWFTISVLSPGATSVLIHNFLYGWATEWVF 108 Query: 261 ---QTEPAPAPFHVVAWPEQDQERNAFALKIP--ALLGILATHSLDKPVPGLKNLMAETY 315 + F+ +Q + + L + + + L + Sbjct: 109 FVVEIVALFVYFYTFGKMDQQRHLTVGWIYFGAAWASLFLINGIIAFMLTPGEWLQTGNF 168 Query: 316 PRLQRGRMAWLLMQ---------EISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNH 366 W + G ++ + + Y Sbjct: 169 WHGFFNPTFWSSLVFRTFMAIVLAGVFGFVTATFMKDQQARAQLIRYNARWLLVPMVFLV 228 Query: 367 VTAAQYQA--------AMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 + Y + P++ P F +F L V L L+ T RG Sbjct: 229 ASGWWYLQSVPEPARELILDRSPELVPYFKAFL------WLSGAVFLGGLLLTARG---G 279 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDIL 457 RW +A + L + + ++ E GR P+ I D + Sbjct: 280 RRWQRPLAFVLMALALGYMGSFEYIREAGRHPYLIYDYM 318 >UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB8_9DELT Length = 837 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 89/284 (31%), Gaps = 17/284 (5%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATG 70 AL A H +G L + E +G + + K F + A G +G Sbjct: 17 IALIATVHVYVAHFAVGGGLFLILTERAAYRSGNPHLLEYAKKHTKFFLLLTMAFGAVSG 76 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + + F + + F A E + F E + ++++ W+ +N+ HL+V Sbjct: 77 VAIWFTIALLAPQATITLIHNFVFAWAAEWVC-FTGEIVALIIYYYTWETMNRRDHLMVG 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 L S I G+M P ++ F + +FNP V Sbjct: 136 TLYFIFGWFSLFLINGIVGFMLTP--------GEWLQTRDFWDGIFNPTFWSSLVFRSFF 187 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQP 250 +F + R + + S + ++ + G +A + P Sbjct: 188 SAACAGLFSFVTAT----RISDEATRTQVLRTCSAWTIAGVLAVVATGFWY---MADLPP 240 Query: 251 VKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGI 294 + + + + + AL++P L+ Sbjct: 241 AQYELVALKSHRVAGFMRWFWIFAGLTLMGGLILALRLPRLMTF 284 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 146/368 (39%), Gaps = 4/368 (1%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + L+R QF + + LF+ L L L +LL + TG + RFW + F ++F Sbjct: 5 PLLLARIQFTASLSFLALFMALALALSWLLLFFKLRAHRTGLPGWTAAYRFWVRFFALSF 64 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 L +A L + Q G+ W + +G++ G + L F L+S F+G+ FG +R+++ Sbjct: 65 VLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLSVFILKSCFLGVMLFGQRRVSE 124 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183 H L ++VA G ++ W+L W+Q P GA R ++ + VFNP Sbjct: 125 RVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGATLI--DARYQVYDWYAAVFNPSLGWN 182 Query: 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243 T + + A I+ ++A LR + +F V A + + D + Sbjct: 183 LGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKTALVVAVAASLLQAPVLDGAGR 242 Query: 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303 +A+ QP K AA G W + P + + WP+ + N AL +P G Sbjct: 243 VMAEHQPAKAAAAAGYWHSGAEPG-WTLFGWPDARAQANRAALALPGAGGAWLGRDAQGV 301 Query: 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363 GL P + A + + + L L + + Sbjct: 302 YQGLDKFSGM-RPPVALTFWALRVALLLGAAMLLVSCVTLALTARRGLDPAQLPAWWLRV 360 Query: 364 MNHVTAAQ 371 + + A Sbjct: 361 IVGMLYAG 368 >UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales RepID=C7LSV8_DESBD Length = 881 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 14/239 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG-INFALGVA 68 AL A++H +G L + E + D T+ K F + LG Sbjct: 15 LLIALIAVFHVYIAHFAVGGGLFLVLTEHLGYRRQSPAILDYTKRHTKFFLLVTMVLGGI 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F ++ + F A+E + F E + ++F+ + ++ + HL Sbjct: 75 TGVGIWFIISLVAPAATSQLIHTFVFAWAIEWVF-FLCEIVSLFIYFYTFGKMGRRNHLT 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 + WL F +S I G+M P +E F + +FNP Sbjct: 134 MGWLYFFFGWMSLFMINGIIGFMLTP--------GDWLETKDFWDGLFNPSFWPALAFRT 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 + ++ + W ++ + + L G + + + Sbjct: 186 FIALILAGLYGFVTATW----EKDPKTRETLVRYCATWLLAPFAFLLLSGWWYVHVLPE 240 >UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H2_DESAC Length = 655 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 77/244 (31%), Gaps = 16/244 (6%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF-GIN 62 A+ A+ H +G L + E + + K F + Sbjct: 9 PETGGGLLIAIMAVTHVFVSHFAVGGGLYLVMTEHKARRENDDQLLEFVKKHAKFFMLLT 68 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 G TG+ + F G ++ + F A E + F +E + ++++ + ++ Sbjct: 69 MVFGGVTGVGIWFTIGLIQPDATSKLIHTFVFGWAAEWVW-FLVEIIALIIYYYKFDSMD 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL V W+ + LS I G+M P + F FNP Sbjct: 128 ERTHLKVGWIYFAAAWLSLFLINGIIGFMLTP--------GEWVNNHQFFSGFFNPTFWP 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVAL-RSFAIGSVFGTLAIIGTLQLGDSS 241 + + + A++ + + S++ L+++ + G Sbjct: 180 SLWFRF-----AISTLLAGVFAFFTTAFIDVEAFRLKMTRYSSLWCLLSLVVVIPTGYWY 234 Query: 242 AYEV 245 + Sbjct: 235 LQVL 238 >UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F9_9DELT Length = 880 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 14/231 (6%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATG 70 AL A+ H +G L + E G + F + G +G Sbjct: 17 IALIAVLHVFVAHFAVGGGLFLVLTEAKARKAGSAPIMAYLHRHTRFFLLLTMVFGALSG 76 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + + F + + F A E F E + ++++G+ RL +H LV Sbjct: 77 VGIWFTISVLSPQATLVLIRTFVWGWATEWTF-FAGEIAALLVYYYGFDRLEPARHQLVG 135 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 + + LS + G+M P F + +FNP V Sbjct: 136 FFYFLFAWLSLFTVNGIIGFMLTPGQ--------WPVTLDFWDGLFNPTFLPSLVLRTAM 187 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSS 241 + +F + L R+ + A L G Sbjct: 188 ALLLAGLFGFGTA----LGIRDEEARETMLRAACRWVVYAAPVLLLSGWWY 234 >UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3EB84_GEOLS Length = 585 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 77/239 (32%), Gaps = 14/239 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF-GINFALGVA 68 AL A+ H +G L + E + D + K F + G Sbjct: 15 LLIALVAIVHVFVSHFAVGGGLYLVLAERKAIKEKSQAIMDFVKKHTKFFMLLTMVFGGL 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F ++ + F A E + F +E + ++F+ + +++ H Sbjct: 75 TGVAIWFVISLIHPAATSLLIHTFVFGWAAEWVF-FLVEIVALFVYFYAFGKMDDRTHQT 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 + W+ + +S I +M P + ++F FNP Sbjct: 134 IGWIYFGAAWMSLFLINGIIDFMLTP--------GSWISTSNFWSGFFNPTFWPSLFFRS 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 ++ + + + ++ R V+ +++I ++ G + Sbjct: 186 FMSFMLAGCYGFLTATFL----KDEEARHRMIRYSGVWALVSLILSVPAGWWYISVLPD 240 >UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like n=2 Tax=Desulfovibrio RepID=Q316Q4_DESDG Length = 841 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 16/272 (5%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN- 62 A+ A+ H +G F L + E V D R + F + Sbjct: 9 PFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTT 68 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 G TG+ + F ++ + F A E F E + ++ + + + Sbjct: 69 MVAGGLTGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAF-FLGEIAALLVYHYYFDSMP 127 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + H+ V W+ AF + +S + I M P + F + FN Sbjct: 128 RKAHIKVGWVYAFFAFMSLVVINGIITVMLTP--------GKWAQTHLFWDGFFNVSFWP 179 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + +F + +R R +++ L G Sbjct: 180 SLSLRFALCLMFAGLFAFVTA----IRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYL 235 Query: 243 YEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAW 274 + P + ME QT F + Sbjct: 236 LILPD--PQQSMVMERSTQTPHLVQAFIPLGI 265 >UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XLC6_DESMR Length = 877 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 73/235 (31%), Gaps = 14/235 (5%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVATGLT 72 L A+ H +G L + E + TG + F + G +G+ Sbjct: 19 LIAVLHVYVAHFAVGGGLFLVLTEAMARRTGSRPLLTYLHRHTRFFLLLTMVFGGLSGVG 78 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWL 132 + + + F A E F E + ++++G+ RL+ +H+LV WL Sbjct: 79 IWLTISLLSPQATLILVRSFAWGWAAEWAF-FAGEIGALLIYYYGYDRLDPKRHMLVGWL 137 Query: 133 VAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGY 192 + LS I G+M P F + FNP V G Sbjct: 138 YFAFAFLSLFTINGIIGFMLTP--------GDWPATRDFWDGFFNPTFWPSLVLRFALGL 189 Query: 193 VTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQ 247 + +F A + L + S + A L G + + Sbjct: 190 MLAGLFGFATA----LGIGDEEARETMLRASSRWAVAAAPVLLVSGWWYVDVLPE 240 >UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHW0_THEYD Length = 883 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 82/241 (34%), Gaps = 14/241 (5%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALG 66 S A+ A++H +G L + + V G R R F + G Sbjct: 13 SGTLVAIIAVFHVFISHFAVGGGIFLWLTDLKSVREGNISLRQYVRKHVWFFLLLTMVFG 72 Query: 67 VATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQH 126 TG+ + F + + ++ + F A+E + F +E + ++ + ++ L+ Sbjct: 73 GVTGVGIWFIIALSSPWATSLLIHTFVFAWAIEWVF-FIVEIVSLLIYHYKFETLSDKNR 131 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 L + ++ A + LS I +M P + SF + FNP + V Sbjct: 132 LRIAFIYAASAWLSLFVINGIITFMLTPGQ--------WLRTHSFWDGFFNPTNLPGLVF 183 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVA 246 + +F + + +E + + + + + G Y + Sbjct: 184 RTAICIMFAGLFGFVTAVF----EKEDKLRQEFLRYCVKWLYIPLPFLIISGLWYFYSIP 239 Query: 247 Q 247 + Sbjct: 240 E 240 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 292 LGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQ----GNREPHVLQAFRGL 347 +G++ T SL +PG+ +L+ T ++ G A+ ++ I G F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 EGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIA 407 G LGY +LL RY D T AQ A +P V P+FW+FRIMVG G + + Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALT 467 ++R ++D H W+LK+A+ ++PLPWIA E GW + E GRQPW I+ +LPT A S L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 TGQLAFSLIMIVGLYTLFLIAEVYLMQ 494 G L ++ + +Y++ + E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLMI 207 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 133/367 (36%), Gaps = 71/367 (19%) Query: 151 MQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRG 210 M P G F++ +M E +FNP V+ H + +T A I +I+A+ LLR Sbjct: 1 MNTPAG--FELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 R---ERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA 267 R + ++ + + G + + ++ GD SA + + QP KLAA E + T + A Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDT-SSHA 117 Query: 268 PFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLL 327 + ++ ++ A+++P LL LA +S+ V GL + +P + + L Sbjct: 118 KLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPM-IVHYFFDL 176 Query: 328 MQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVF 387 M + + M + + Sbjct: 177 MVTMGILCFVISGVYVL-----------------------------TLMFKKLRNFSTHK 207 Query: 388 WSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFG 447 W ++ G +L + WF+TE G Sbjct: 208 WMLYGILLTGPASMLAIEFG---------------------------------WFLTEMG 234 Query: 448 RQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSE 507 RQPW ++ + A + G + F I+ LYT+ + Y++ + + P+ Sbjct: 235 RQPWIVRGYMRVAEAATQ--AGGITFVTILFGILYTILMYTCAYVLIRMFKNKPAYEDVN 292 Query: 508 QPTQQQG 514 + ++QG Sbjct: 293 RLAKKQG 299 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 117/352 (33%), Gaps = 64/352 (18%) Query: 145 LNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISA 204 + AN WM P G D VF P+ ++ H V+ +T + + A Sbjct: 1 MAANAWMNTPRGFTLDAS-GNPVNVDVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEP 264 LL GR F + + LGDS A V QPVK AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTVPFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKTGT 119 Query: 265 APAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMA 324 P ++ D + +KIP L ILA S++ V GL ++ A P + +A Sbjct: 120 -HMPEYMFGRLRSD-GSISGGIKIPQLDSILAGFSVNTKVTGLSSVPASDRPTATQATIA 177 Query: 325 WLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVA 384 + + G LL + + +P+ Sbjct: 178 H-------------------WAFDIMVTIGSLL------VLLALWYGWCWLRHRGLPRSP 212 Query: 385 PVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMT 444 W FR G+ LL +E GW T Sbjct: 213 ---WFFRCAAVAGAACLL---------------------------------TVECGWITT 236 Query: 445 EFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKY 496 E GRQPW + + A + L L ++V +Y L L A + ++ K Sbjct: 237 EVGRQPWIVYQNMRVSEAVTDTRASSLWAMLGIVVVVYVLVLGAFLAVLLKM 288 >UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD1_CALMQ Length = 417 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 118/373 (31%), Gaps = 5/373 (1%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M + + A H V LGL +LL +E + +G+ Y D+ Sbjct: 1 MVSPVVATVALIAWAFSVHLPLVYTVLGLGWLLPTLELLGYRSGRRTYIDIAHGLSSYLI 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 +A+G G + ++N G + + + + +G ++ + R Sbjct: 61 AVYAIGGVFGTIVTVFLAGLLPVFTNIAGALLWPVWGIAIVFGVAIALPLIGFYYRSFNR 120 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDI----DTLRMEMTSFSELVF 176 L+ +H+ V + +A + + ++ YP G +T + +E + Sbjct: 121 LSPMRHVAVGYGMAITLTVIPVMFRLVFAFINYPAGVAIAPSSTSNTGFTLSVNLTEALS 180 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 NP + T+ ++ + +I W R IG+ G + I Sbjct: 181 NPTYPPLLLATLFGAIAMTSILVSSIHGWRYASSR-SEYHELGHRIGNTVGLIFGILYSI 239 Query: 237 LGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILA 296 Y V Q P ++ G + A + + + + A++ IL Sbjct: 240 FAAWYLYTVYQYSPTVAWSIFGHPPSYLPSAFYGLYKPTFNLSWMLYMNIALGAVILILL 299 Query: 297 THSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGML 356 S+ ++ L P L + + P L + + Sbjct: 300 VVSIKVTSKPIEVLKLILTPMLMDSAEVMNGLAHVPYAIVPPVAAAEALIKAYGLSFALN 359 Query: 357 LSRYAPDMNHVTA 369 ++++ +T Sbjct: 360 VAKWLTISQLLTP 372 >UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1E9_PELCD Length = 430 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 14/237 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFAL-GVA 68 A A+ H +G F L ++ET + T+ + +LF + + G Sbjct: 15 AMIAAIAVSHVFISHFAVGGGFWLVLLETRALRHRDQPLYRFTQSFARLFVLTTLIFGAL 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 TG+ + F ++ + F A E ++ F +E + ++ + L +HL+ Sbjct: 75 TGVGIWFAISLVQPAGTSALIHRFVFIWAAEWVL-FLVEVVAITVYLHSFGHLAPRRHLI 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V + S LS I +M P + + + FNP Sbjct: 134 VGRVYCAASWLSLFAINGIITFMLTP--------GMASQHSGLPRAFFNPSFWPSLALRT 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 + +F+ +A+ +R++A R + + + LA+ G L G + Sbjct: 186 CLAGLISGLFVAIFAAFL----ADRDLASRLIRMTAGWSLLALCGALPAGLWYLQSL 238 >UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome bd quinol oxidase (CydA) n=2 Tax=Bacteria RepID=Q1PZE5_9BACT Length = 699 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 13/259 (5%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR + + H +F LG+ I+E + +G Y M + + KL FA Sbjct: 97 SRVVVWIVSELHLMFAAFVLGVPIFAVIVEIVGFKSGDIKYDKMAKEFTKLLSAAFATTA 156 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-----N 122 + G + F + + +++ +F + + +LM FF E+ + +++ W L Sbjct: 157 SLGGLLAFCLFGLYPEFMSHLTSVFAPTMYVYSLM-FFGEAFTLYGYYYSWDVLKGTSTK 215 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K+ H+ + ++ + +M P+G + S E +N + Sbjct: 216 KWCHIALGIMLNLFGTGLMFITNSWATYMMSPSGVSMKTG----RLLSLYEAFYNELWMP 271 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERN---VALRSFAIGSVFGTLAIIGTLQLGD 239 +H ++A G + A +A L + + +G+ G A+I G Sbjct: 272 VNLHRLIANVCFGGFVVGAYAAVKFLNSKTKEERAHYDWMGYVGNFIGIGALIPLPFAGY 331 Query: 240 SSAYEVAQVQPVKLAAMEG 258 EV PV M G Sbjct: 332 WLGREVYSASPVMGNIMMG 350 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 79/331 (23%), Positives = 119/331 (35%), Gaps = 38/331 (11%) Query: 3 DVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGIN 62 +D +RW A+ L H LG I + I E +Y+V + D R + + I Sbjct: 13 STLDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIF 72 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL- 121 F +G A G +EF T WS + +G P +E L AF E + L+ F W ++ Sbjct: 73 FGVGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTWGKVR 131 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQY-PTGAHFDIDTLRME----MTSFSELVF 176 N + H ++ AFG SA IL + P G E +TS+ Sbjct: 132 NGWVHWVIGLAAAFGGYWSAYNILAVMASLSMRPPGMIIQNLAASNETIAGLTSYLVTWA 191 Query: 177 NPV---------SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFG 227 P + V H ++A + + AI + +R + A I Sbjct: 192 KPTDAWNMFWWGANVFIFHGILAAAILTWSVVGAIYLYGYVREHRPDQAKVLKVIIPGVA 251 Query: 228 TLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALK 287 + I LG V Q P+KLAA+EG + LK Sbjct: 252 VMTAIEGFILGHDQGELVLQFDPLKLAAIEGMFWK----------------------GLK 289 Query: 288 IPALLGILATHSLDKPVPGLKNLMAETYPRL 318 + LL A + + G + A P L Sbjct: 290 VDPLLSFFAYGTFNHAFWGYYSWPANVRPPL 320 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Query: 36 METIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAP 95 ME +++ T IY + +FW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT 155 + +E + AFFLE+ F+G+ FGW+R + HL+ T LV G++ SA WIL+ N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTPD 120 Query: 156 GAHFDIDTLRMEMTSFSEL 174 G + + + ++ Sbjct: 121 GISVI--DGSIRIHDWLKI 137 >UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibrio vulgaris RepID=A1VBG6_DESVV Length = 430 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 80/266 (30%), Gaps = 14/266 (5%) Query: 10 WQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-NFALGVA 68 A+ ++ H +G FLL T G + + + F + + G Sbjct: 15 LLVAIISVLHVFVAQFAVGGGFLLVHAATRAERAGSAEATFWVKRFTRFFLLLSMVFGGV 74 Query: 69 TGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLL 128 +G+ + ++ + F A E + F E + ++++G+ ++ H Sbjct: 75 SGVGIWVIISLISPAATSLLVHRFVYAWATEWVF-FLGEIVALLVYYYGFGKMRFEDHRN 133 Query: 129 VTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTV 188 V L + LS I +M P M+ F + FNP + Sbjct: 134 VGLLYGLFAYLSLFMINGIITFMLTP--------GAWMQTQGFWDGFFNPTFWPSLLFRS 185 Query: 189 MAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQV 248 + +F + ++ + + ++ + I + Sbjct: 186 ALCAMLSGLFGLVWASL----IDDERARELMTGVTRLWALVPIPFMAVGAWWYIGALPAP 241 Query: 249 QPVKLAAMEGEWQTEPAPAPFHVVAW 274 Q + + + P+ + A Sbjct: 242 QLEMVLRRTADIRPFLEAFPWVLAAL 267 >UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU9_CHIPD Length = 499 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 24/250 (9%) Query: 9 RWQFALTALYHFLFVP-LTLGLIFLLAIMETIYVVTG------KTIYRDMTRFWGKL-FG 60 R+ A+ A+ H + L +G I L+ +E V + + K+ F Sbjct: 14 RFLIAMIAIIHVIINHGLAVGFIPLVTWLEQKGVKNSHAMEITDLSWDKLAWKMMKVGFI 73 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 I LG TG+ + F + +F E ++ F E + ++F W+ Sbjct: 74 ITTTLGAMTGVGIWFSVALVSPASIGSLIRVFYWAWFTEWIV-FVTEVVLILIYFLSWEN 132 Query: 121 LNKYQ-----HLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV 175 NK H+ W ++ S ++ + I++ G+M P S Sbjct: 133 ANKSLTSKLRHIRFGWFLSIFSWITMVIIVSILGFMMDP--------GNWNTHHSLLNGF 184 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 NP+ + + V G +F + L ++ R+ S + +L Sbjct: 185 TNPIYIPQLLFRTPTAMVVGGVF--GLMLITLFTENGTSIRKRAIRSASAWILCWAPLSL 242 Query: 236 QLGDSSAYEV 245 + Sbjct: 243 AGAVYYYGVM 252 >UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK9_ARCB4 Length = 466 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 76/254 (29%), Gaps = 13/254 (5%) Query: 4 VIDLSRWQFALTALYHFLFVPLT-LGLIFLLAIMETIYVVTGK-TIYRDMTRFWGKLFGI 61 R A+ A+ H +G +LA + Y + + F I Sbjct: 12 PFIGQRMLMAINAIIHVFVSHGGAVGGSVVLAALAWWANKKNDMQAYNLIYKVVMVFFII 71 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR- 120 + ++G TG+ M + +F +E ++ F E + L F W++ Sbjct: 72 STSVGALTGVGMWIHANILSPNAIGGLIRVFFWKWFIEWIV-FNFEVVLLLLLFMTWKKN 130 Query: 121 ----LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPT--GAHFDIDTLRMEMTSFSEL 174 + + + A S L+ + I +M P G + + ++ Sbjct: 131 QQTPEGRAKTVRFGVYYAISSWLTMVIITAILAFMLTPNFDGQPWVDPEVYPGNVDYNNA 190 Query: 175 VFNPVSQVKFVHTVMAGYVTGAMFIM---AISAWYLLRGRERNVALRSFAIGSVFGTLAI 231 +FNP A + I A + ++ R + + + Sbjct: 191 LFNPTWWPSLAFRTFTSIAFAAALAIMWTWIIATFSKNEEDKEAKARLIKFLAAIMLITV 250 Query: 232 IGTLQLGDSSAYEV 245 + G E+ Sbjct: 251 PISAIFGYWYYTEI 264 >UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME3_THISH Length = 473 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 12/248 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ S W L A H LF ++G A + TI + + +G + Sbjct: 11 YEPTIGSGWVVGLIATIHVLFSHTSVGAAIFFAFLATIAYRRNQPELLTFIKKYGLFLLV 70 Query: 62 N-FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 + G TG+ + + + + F A E + F +E V + + + Sbjct: 71 FAYVAGSITGVGIWYSTTVASPRGISALIHSFVWKWATEWVF-FVIEVVGVYMVVYLVGK 129 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 +++ HL +TW+ A S + L I+ +M +P + + + + + Sbjct: 130 VDQRTHLRITWIFALASYATMLIIIGILSFMLWPGKEAWFAEGG------YLNGFYGSNT 183 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + A T + I A L + ++ + G ++ I L Sbjct: 184 FAQLA-MRSAFMFTMTAVVGGIVASRL---TDLDLRREIIRKLAWLGIVSTITGTALFSW 239 Query: 241 SAYEVAQV 248 + + Sbjct: 240 YTSTLPEH 247 >UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V8T0_SULSY Length = 455 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 4 VIDLSRWQFALTALYHFLFVP-LTLGLIFLLAIMETIYVVTGKTIYRDMTRF-WGKLFGI 61 + R FA+ A+ H L +G +LA+ + + T D+T LF Sbjct: 10 PVLGHRLIFAIDAILHVLISHGAAVGGSIVLALTQWYAIKTNDQKLYDLTYKILFVLFIA 69 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFF-----F 116 A+G TG+ + + +F E ++ F +E F+ +F + Sbjct: 70 ATAIGALTGIGIWIHANIIDPPAIGSLLRVFFWKWFTEWIV-FNVELIFLLAWFLTWKTY 128 Query: 117 GWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVF 176 GW++ K + A S L+ + I G+M P + + + +F Sbjct: 129 GWEKRTKNLKF--GIVYAVASWLTMVIITAILGFMLTPGNW---LKSDFPAQPDYIASLF 183 Query: 177 NPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ 236 NP + + G +++ + + + ++ I T+ Sbjct: 184 NPSWIPSLMFRTF--FAIGFAAAISMYWTWWFTRNDLALREKAERWFGRIVLATIPITII 241 Query: 237 LGDSSAYEVAQ 247 G ++ Q Sbjct: 242 FGLWYYAQIPQ 252 >UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3P6_DESDA Length = 459 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 16/239 (6%) Query: 12 FALTALYHFLFVP-LTLGLIFLLAIMETIYVVTGKTIYRDMTR-FWGKLFGINFALGVAT 69 AL A+ H + L +GL+ ++ + +T+ + + ++R G + ++G T Sbjct: 17 IALDAVLHVIISHGLAIGLMTMIILFQTLTWMGKGEHWAKISRSLLGPTVVVITSVGAVT 76 Query: 70 GLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN---KYQH 126 G+ + F + +F P +E AF E + ++++ W RL + Sbjct: 77 GVGIWFITSILAPEGIGSLIHLFFWPWFIEW-GAFTSEVILLLIYYYLWDRLAEKQPGKL 135 Query: 127 LLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVH 186 + W + SA+ I G+M P G + F + FNP + Sbjct: 136 AALGWGYVVMAVFSAILISGILGFMLTPDGWPWG--------QDFDQAYFNPTFAPQVFL 187 Query: 187 TVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 + AG G++ + A AW + + + + + V Sbjct: 188 RLAAGLAIGSLLLTAWIAWRFKGTAQERGS--ALRLSGGVFLACVAVAGVSAWVYFSRV 244 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 117/144 (81%), Positives = 131/144 (90%) Query: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300 SAYEVAQ+QPVKLAAMEGEWQTEPAPAPFH++AWP+Q+QERNAFA+KIPALLGILATHSL Sbjct: 2 SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL 61 Query: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360 D PVPGLKNLM + PRL+RGR AWLLMQEI+QGNR P VL AF +EGDLGYG+LL++Y Sbjct: 62 DTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY 121 Query: 361 APDMNHVTAAQYQAAMRGAIPQVA 384 APDMNHVT QY+AA RGAIPQVA Sbjct: 122 APDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 1/147 (0%) Query: 369 AAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALW 428 + + P V VFWSFR+MVG G L++++ ++++Q LRGK+ Q ++ + Sbjct: 66 VKGLKEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFLHGWWIS 125 Query: 429 SLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSA-HSALTTGQLAFSLIMIVGLYTLFLI 487 +P +IA+ AGWF TE GRQP+ + I+ T + SA+T Q+A+SLI + +YTL Sbjct: 126 MMPSGFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLIAFIVMYTLIFG 185 Query: 488 AEVYLMQKYARLGPSAMQSEQPTQQQG 514 A Y + K G ++ E+ + G Sbjct: 186 AGSYYILKLIYKGIPVIKEEEQFYKHG 212 >UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales RepID=D1AZW3_SULD5 Length = 445 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 10/245 (4%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-N 62 S W +T H LF ++G L A + ++ Y + +G I + Sbjct: 13 PEYGSAWMMGITGTIHILFSHTSVGAAMLFAFLAHKAYKENRSDYYPYMKKYGMFLLIFS 72 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + LG TG + + + + F A E + F E V + + +++ Sbjct: 73 YVLGSITGPGIWYTATAASPRGISALIHNFVWVWATEWVF-FIYEVIGVFVLVYFMNKID 131 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 K HL +T+ A S + I+ +M +P + + F + P + Sbjct: 132 KKTHLQLTYTFAIASVGTLALIIGIISFMMWPGTQAYYATGSASDA--FFGINTFPHMFL 189 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + +M V G + A+ R ++ TL Sbjct: 190 RVGFMIMMSGVIGLLISSAM------RKENEELSNELSRKMGYVSIFGGFITLFFFVWYM 243 Query: 243 YEVAQ 247 + Sbjct: 244 GTLPD 248 >UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like protein n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASZ4_RUBXD Length = 448 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 84/259 (32%), Gaps = 15/259 (5%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 + A+ H L L LG + E + +VT + Y R +L I F Sbjct: 9 PVIGKNVTIAVLVQTHILIATLILGASLIAPTAEYLGMVTKQPRYERFARNLARLIVILF 68 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL-- 121 A G A +T T + + +Y+ +IF +EA F + ++ W +L Sbjct: 69 ATGSALAITFVLALVTLFPIFFSYLQNIFFWVFLVEA-FLFLGVIIVLYAWYSVWDKLAY 127 Query: 122 NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQ 181 K H++ ++ + I +M P +T + NP Sbjct: 128 RKSLHVVFGFVAGGIGLIQMTMINVIASYMLTP---------SEAPVTDVASTYLNPTFV 178 Query: 182 VKFVHTVMAGYVTGAMFIMAISAWYLLRG---RERNVALRSFAIGSVFGTLAIIGTLQLG 238 +H + I +AW LR +R G ++G ++ +G Sbjct: 179 PLNMHRFVGNLSYVGFLIAGWAAWRYLRSTGEEDREYYDWMGHFGLLWGFGFLLLQPVVG 238 Query: 239 DSSAYEVAQVQPVKLAAME 257 + + P + Sbjct: 239 YGYLKAIRESSPEAFNTIM 257 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 3/163 (1%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63 R + H+ + +GL FL I IY T + + K F I F Sbjct: 12 PAFSDRVLSLIGIEAHWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVF 71 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123 A+G ATG EF W + G PL E + AF LE F+ L ++GW++ K Sbjct: 72 AVGAATGTASEFGLVLLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGK 130 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGA--HFDIDTL 164 +++ +L G SA I++ N +M PTG +D +T Sbjct: 131 SAMVVLLFLSFIGPWYSAAMIVSVNSYMVAPTGIVPAYDPNTG 173 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 100/339 (29%), Gaps = 72/339 (21%) Query: 175 VFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLR-----GRERNVALRSFAIGSVFGTL 229 +PV +H + A + IMA A + ++ +F +V + Sbjct: 285 FKSPVYLASILHVIGAALTVSSFTIMAAYAMRIKSYGKSPKEYKDYVNAAFKFAAVSALV 344 Query: 230 AIIGTLQL-GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKI 288 I + G +A P K AAME A +Q Sbjct: 345 TIAIQGFVFGHEMGTSIAHYNPEKFAAME---------------ATTDQITPVTKILPGG 389 Query: 289 PALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLE 348 L+ +LA + P+P + ++ Sbjct: 390 EKLVALLAYGDPNAPLPNYDKIPSDY---------------------------------- 415 Query: 349 GDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIAL 408 Q AA G+ + + + G G L+ L L + Sbjct: 416 ---------------CFFPATLQEDAARIGSCKPPLIIHYLYYAKTGLGILMGLYALAIV 460 Query: 409 VQTLRGKIDQH--RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSAL 466 R K + RW+L +A S+ + GW + E GR+PW I ++ AH+ Sbjct: 461 FYLWRTKDPEKTPRWLLSVAPLSIIIIQFVSFLGWAVREIGRKPWTIYGVMTPDVAHTVN 520 Query: 467 TTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQ 505 A +L+ I L L + + P ++ Sbjct: 521 PPSVGAVTLVAIFFLAILAALGYSVYRFLWLPGKPEEVK 559 >UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=2 Tax=Archaea RepID=A1S0C2_THEPD Length = 396 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 6/247 (2%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL 71 AL H + V + + L ++ ++ G + R K++ + L G Sbjct: 8 MALVFGVHIVAVNIGIALSTIVPLLVKRSRALGDKGLEGVARSLFKVYAATYGLAGVMGT 67 Query: 72 TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 + + + G++ P + ++++ L + F++GW R + H V W Sbjct: 68 AFTVFLASFYPEFVGVAGNLTMVPFGI-SIVSIMLHFFAIVAFWYGWDRFSPKVHEAVGW 126 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 L+A + L ++ P G + + + NP ++ +V+ Sbjct: 127 LLAATAYTIPLGFRAVFAFLNTPAGLVLGEKPSLNVV----QALLNPTFPPLYLKSVVGA 182 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPV 251 V G +F+ A+ A+ LR + + + ++ + + LG A + V PV Sbjct: 183 LVAGFLFVAAVLAFKGLRTALTDAERGLYVFSLRYASMLLFAMMFLGAWYAVSLVNV-PV 241 Query: 252 KLAAMEG 258 K + Sbjct: 242 KFNNIFA 248 >UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWM7_HALO1 Length = 490 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 12/221 (5%) Query: 17 LYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRD-MTRFWGKLFGINFALGVATGLTMEF 75 ++H +G LL E + M F+ L ++F LG TG+ M F Sbjct: 33 IFHVFLAQFAIGGGMLLCYFEHLRASGKVPAAAHFMDGFFKVLVLVSFVLGALTGVGMWF 92 Query: 76 QFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAF 135 + + D F A+E F LE F+ RL + + Sbjct: 93 TSIQTSARTIGLMVDAFHWLWAVEWTF-FLLEVVTGYTFYRYGDRLPDRLRQRLLIFYSI 151 Query: 136 GSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTG 195 + S WI W P +E + FNP ++ + Sbjct: 152 AAWGSLFWINGILSWQLTP--------GAWLENGNVWAGFFNPSFFPSLLYRTLVSMTIA 203 Query: 196 AMFIMAISAWY--LLRGRERNVALRSFAIGSVFGTLAIIGT 234 A+ + + L R + + R+ + ++G Sbjct: 204 ALVACLVINFMSELSREQRHALIGRASHFLVPMALMPLLGL 244 >UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I0Y1_THIIN Length = 493 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 4/246 (1%) Query: 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI-N 62 + W + H L ++G L A++E+ V K + +G + + Sbjct: 14 PQIGTAWVMGIIGTIHVLASNTSVGAAVLFALLESRSVRENKPEIMQYIKKYGMFLLVFS 73 Query: 63 FALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN 122 + G TG + + + + F A E + F +E V + +++ Sbjct: 74 YIWGSVTGPGIWYSTTVASPRGISALIHNFVWAWATEWVF-FTVEVIGVYALVYTIGKID 132 Query: 123 KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 HL +TW S + + I+ +M +P + + + F L F Sbjct: 133 PKTHLKITWTFVVSSVATLVLIIGILSFMMWPGSDRWYLTGSVFDA--FYNLNFAAQLAD 190 Query: 183 KFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + + + V G++ + AI LR R G + G L+ + + +A Sbjct: 191 RGFLMLTSAAVVGSIIVAAIPKGDPLRRDVGQTVARLGLTGLIGGALSFMWYVATLPPNA 250 Query: 243 YEVAQV 248 + + Sbjct: 251 LVILKD 256 >UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B63 Length = 474 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 124/384 (32%), Gaps = 31/384 (8%) Query: 2 WDVIDLSRWQFALTALYHFLFV-PLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWG-KLF 59 D + R L A H L PL +G +L ME + + +F Sbjct: 8 LDHVAGGRLIIGLIASLHVLINHPLAVGAYPILTWMEWWAHKHQRPDIDRLAYRVTSVVF 67 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 + +G TG+ + F + +F E L+ F E + +F W+ Sbjct: 68 IVTTTVGALTGVGIWVSTSLFAPFAIGSLLRVFFWGWFAEWLV-FISEVGLIMWWFLSWK 126 Query: 120 RLN----KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELV 175 + N K +H+ + ++ S + I+ G+M P + +F + + Sbjct: 127 QANTPEKKRRHIKIGVALSVMSWFTMALIVAVLGFMMKP--------GEWSQTRAFLDAM 178 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTL 235 NP+ + +TGA+F+ + + +R + S F + ++ TL Sbjct: 179 VNPLYLPQLGFRTFFALMTGAVFVW--FSSFFFTKGQRELRTWLVYRLSHFTMVGLLMTL 236 Query: 236 QLGDSSAYEVAQVQPVKLAAM-----EGEWQTE-PAPAPFHVVAWPEQDQERNAFALKIP 289 G V V A W + A + +V++ +F+ +P Sbjct: 237 LFGLWYWQSVPDVMKANSAVALLSQQFMSWHDQFSALLGWTLVSFLVVAVAGLSFSEMVP 296 Query: 290 ALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEG 349 +L + + M + R + ++ E N AF EG Sbjct: 297 RWALLLPSF--------MGIWMLGHFERAREFMRKPWVIGEYLYSNGVRKDELAFLQHEG 348 Query: 350 DLGYGMLLSRYAPDMNHVTAAQYQ 373 L + ++ + A Sbjct: 349 MLKHATYVAHRTVTPENKVEAGQD 372 >UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibium RepID=B2V8T1_SULSY Length = 457 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 85/251 (33%), Gaps = 13/251 (5%) Query: 2 WDVIDLSRWQFALTALY--HFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLF 59 D + + + L + H +F+ + LG L I I + Y + Sbjct: 25 MDALLVPVFHILLVVSFLVHIVFINVLLGSSVLSVINNWIGHLKNDKNYDKVAYLLTTPV 84 Query: 60 GINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQ 119 I+ +G G+ ++ + Y + +P + + + L+ F W Sbjct: 85 TISENMGALWGVAPLLIVSVMYTAFF-YSASVMNSPQWLHIIWGNVVAFLISYLYKFTWH 143 Query: 120 RL--NKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN 177 +L +K H+ + + A L++ +M + T T F ++V Sbjct: 144 KLEDHKALHITIGAIAAI------LFLSLPPVFMST-VQLYITPSTWTPN-THFWDVVSR 195 Query: 178 PVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQL 237 P + H + + MF++ + +G++ A G + + + L + Sbjct: 196 PDVLFRLAHFYLGAFAVNGMFMLLYGVYKKSKGQDLEAANILIRQGKAWFLVPTVLNLFV 255 Query: 238 GDSSAYEVAQV 248 G + ++ Sbjct: 256 GTLAFFQFPNY 266 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 4/154 (2%) Query: 365 NHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLK 424 + R P V VFWSFR+MV G L+LL+ + +LV +GK+ + + + Sbjct: 45 LNEPLNGLDTVPRENWPPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHR 104 Query: 425 MALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTL 484 AL P ++A+ AGW TE GRQP+ + +L T + S L+T +A SLI V +Y Sbjct: 105 FALTMGPAGFVAVVAGWITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIYFA 164 Query: 485 FLIAEVYLMQKYARLGP----SAMQSEQPTQQQG 514 V + P ++ P + G Sbjct: 165 VFGMGVLYILHLMAKSPYRGEHGIEPGAPIRTAG 198 >UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU5_HYPBU Length = 403 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 81/236 (34%), Gaps = 6/236 (2%) Query: 13 ALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLT 72 AL +H + V L + L + ++ +G + K + + + Sbjct: 9 ALVFAFHIVMVNLGIFLALYVPYLKRKADNSGDEDLDKVAHKLMKFYAATYGVAGVYATA 68 Query: 73 MEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWL 132 + + + G + P + LM + + F++GW R ++ H L Sbjct: 69 FTVFLLSFYPDFLGLAGHLTLIPFGLAILM-IVVHFFSITGFYYGWDRWSRRVHYFFGAL 127 Query: 133 VAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGY 192 +A + L ++ P G ++ ++ + L NP ++ +++A Sbjct: 128 LALSALLIPFAFRAVFAFLNIPVG--LELSGGKLSLNVAKALTGNPTYWPLYLKSLIAAV 185 Query: 193 VTGAMFIMAISAWYLLRGRERNVAL---RSFAIGSVFGTLAIIGTLQLGDSSAYEV 245 GA I+ A+ ++ + + + + ++ + +G A + Sbjct: 186 TAGAFAIVGGLAYSYVKATDEGYKRAVSQVVKELTPIIAIGLVLMIVMGLWYAVSL 241 >UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like protein (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLC8_9BACT Length = 569 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 16/252 (6%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKT----IYRDMTRFWGKLFGINF 63 SR + H + L + +E +V+ Y + + K+ + Sbjct: 19 SRVLLWVANQQHLYYGSFVLAVPIFCMCIEFAGLVSKDKAMAKKYDQLAYDFVKISLTAY 78 Query: 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN- 122 +L G + F F T + + Y+ IF + + ALM F ES + ++++GW ++ Sbjct: 79 SLTAILGGILIFTFLTLYPAFFGYLSSIFRPVMHIYALM-FVAESGTLYIYYYGWDKMKD 137 Query: 123 ---KYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPV 179 K+ H ++ ++ + + G+M P G + R + + ++ + Sbjct: 138 GLLKWLHCSMSVVLNVIGTVLMFLANSWIGFMMSPAGVD---EQGRF-LGNIWHVLHTAL 193 Query: 180 SQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN---VALRSFAIGSVFGTLAIIGTLQ 236 VH ++ G + A +A+ L + I G +I Sbjct: 194 WNPLNVHRILGNMAFGGGVVAAYAAYRFLSAKNDEERAHFDWMGYIAMSLGVAFLIPLPF 253 Query: 237 LGDSSAYEVAQV 248 G EV Sbjct: 254 AGYWLMREVYAY 265 >UniRef50_D0L1U5 Cytochrome c class I n=2 Tax=Proteobacteria RepID=D0L1U5_HALNC Length = 493 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 75/241 (31%), Gaps = 12/241 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 ++ S W + A H LF +G L + + + D + +G + Sbjct: 11 YEPGIGSGWVIGIIATIHVLFSHTAVGAALLFTYLAYLGYRDDRPELLDFIKKYGLFLLV 70 Query: 62 -NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++ LG TG + + + + F A E + F +E V + + + Sbjct: 71 FSYILGSITGPGIWYSTTVGSPRGISALIHNFVWKWATEWVF-FVIEVVGVYMMVYLVGK 129 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++K +L + S + L I+ +M P + + F Sbjct: 130 VDKATYLRIAITFGMASFATMLAIVGILSFMMEPGMPDWAEKGG--YLLGFYGDNTFAQL 187 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 ++ V G + + + +++ +V G ++ + + Sbjct: 188 AIRIAFMFTMTAVVGGIVVAGL--------KDQVFKTWLARRLAVLGIVSTVVGIAFYPW 239 Query: 241 S 241 Sbjct: 240 Y 240 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 69/132 (52%), Positives = 102/132 (77%) Query: 359 RYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQ 418 RY P++ T AQ Q A + +IP+VAP++++FRIMV CG LLL ++ ++ +R +I + Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 HRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMI 478 +W+L+ AL+ +PLPWIA+EAGWF+ E+GRQPWAI ++LPT A+S+LT G L FS+++I Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 VGLYTLFLIAEV 490 GLYTLFL+AE+ Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARV9_RUBXD Length = 450 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 98/271 (36%), Gaps = 14/271 (5%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + + +R L L H F L +G +++ TG + + + Sbjct: 21 FSSLGGARVITGLVMLIHIFFAELFVGFALAAPVLQYWGARTGTPRMDRLAHSLVRFNVL 80 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR- 120 F+ G + + + + F + + A+++ L + +++ W R Sbjct: 81 TFSTGATFAVLFLVLLVGLYPQVTASLFTHFFYLVVI-AMLSMLLALWGMYTYYYKWDRY 139 Query: 121 --LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSE---LV 175 LNK +H+ + + + + + + +M G + SF + Sbjct: 140 SVLNKGRHIAFGFSMGVFIWIWMVIMTGIDTFMVT-GGGARTPGISAENVASFGAALQAM 198 Query: 176 FNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR---ERNVALRSFAIGSVFGTLAII 232 FNP+ +H A A + A +A+ R + +R + ++G ++G ++ Sbjct: 199 FNPMFVEMSLHRTFANLSWPAFAMAAWAAFMYARSKTPEDRAFFDWTTSVGLIWGAGLLM 258 Query: 233 GTLQLGDSSAYEV---AQVQPVKLAAMEGEW 260 G + AY + A V PV AA G + Sbjct: 259 LQPFSGFAIAYAMKLSAPVDPVSGAAEGGAY 289 >UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcus capsulatus RepID=Q609P5_METCA Length = 455 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 12/247 (4%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 + S W + A+ H L ++G + + T+ V + + R +G + Sbjct: 15 YQPALGSGWVLGIIAVVHVLASHTSVGAALVSTWLATVAVRRNRPELLEYVRRYGVFLLV 74 Query: 62 -NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++ LG TG + F + + + A E + FF+E + L + + Sbjct: 75 FSYVLGSITGPGIWFSATVASPRGLSALIHSYVWWWATEWVF-FFIEVIGIYLLVYLAGK 133 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++ +L + W+ S + L I+ +M +P + + F + Sbjct: 134 VDGRSYLKIAWIFGLASWATMLIIVGILSFMMWPGQERWFTEGGT------LNGFFGLYT 187 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 + + + A+ I+A+ R+ L + G L + Sbjct: 188 FAQILSRTCFMLMAAALAGGLIAAYL----RDGAFRLEMTRKLAWVGILGAVLGAVFFQW 243 Query: 241 SAYEVAQ 247 + + Sbjct: 244 GLTTLPE 250 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 64/77 (83%), Positives = 71/77 (92%) Query: 17 LYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQ 76 +YHFLFVPLTLGL FLLAIM T YV+TGK IY+DMT+FWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSFYSNYVGDIFG 93 FGTNWS+YS+YVGDIF Sbjct: 61 FGTNWSYYSHYVGDIFW 77 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%) Query: 170 SFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTL 229 ++ +VFNP + VH +A ++ A F+ ++AW+LLR R + A ++ L Sbjct: 2 NWWAIVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALL 61 Query: 230 AIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPA--PFHVVAWPEQDQERNAFALK 287 A L GD + QP ++AAMEG+W + P + A P+ + RN + + Sbjct: 62 AAPLQLLAGDRQGENTLEHQPQRVAAMEGDWDARAPGSGEPMVLFAIPDMRERRNHYEVS 121 Query: 288 IPALLGILATHSLDKP 303 IP + + H+L Sbjct: 122 IPRVASLYLRHNLSGV 137 >UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698A02 Length = 287 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 9/179 (5%) Query: 8 SRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGV 67 SR + A H F L L + + ++E + V +G Y M + K+ F++ Sbjct: 91 SRAVVWILAQMHLFFGALVLAVPLFVLVIELVGVTSGDERYDSMAHEFMKISLTGFSITA 150 Query: 68 ATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN----K 123 G ++ + + Y+ +FGA + A + FFLES F+ +++GW + K Sbjct: 151 IFGGSLALALFLLYPDFMGYMMHVFGAQWLVYAGL-FFLESFFLYTYYYGWNAMRYGNAK 209 Query: 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQV 182 + HL + L+ + + +M P+G + + + + E++ P+ Sbjct: 210 WVHLSLGLLLNGAGMTIMVMSNSWATFMMAPSGV----NEVGAVIGNIWEVMKGPLWNP 264 >UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK8_ARCB4 Length = 441 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 80/229 (34%), Gaps = 16/229 (6%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 + + H F+ + +G I + V + Y ++ +G G+ Sbjct: 29 IVFVVHICFIYMLIGASTASVIYNIMGVFKKDSNYDKFAYRMTNYTTVSENMGALWGVAP 88 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRL--NKYQHLLVTW 131 ++ + + + + + + F W L +K H+ + Sbjct: 89 LLVISVLFTGFFYTAILKISPHI-LHIIYGNIIAFLLSYAYKFSWHALQNHKGFHIAIG- 146 Query: 132 LVAFGSNLSALWILNANG--WMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVM 189 L A + + +I + +MQ L + + E++F PV+ + ++ + Sbjct: 147 LSAVLAFFTLPFIFMSMSNLYMQ---------PELFASINNIWEIMFTPVTGFRLLNFFL 197 Query: 190 AGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLG 238 ++ + ++ I A ++ RG + + S + G + LA + + Sbjct: 198 TAFMATGIVMIFIGARWVKRG-DTEIGKISISQGKKWFLLATPLNIVVM 245 >UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive n=4 Tax=Burkholderia pseudomallei RepID=Q3JLJ0_BURP1 Length = 572 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 408 LVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSA-L 466 L G++ R L + P+ ++A+ AGW TE GRQPW + ++ T + + L Sbjct: 433 LTLWRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSL 492 Query: 467 TTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPS 502 TT +A SL V Y A L+ + RLGP Sbjct: 493 TTTDVALSLAAYVLCYLAMFGAGFVLLLRLLRLGPP 528 >UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chloroflexaceae RepID=B8G4R1_CHLAD Length = 470 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 10/193 (5%) Query: 12 FALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTI-YRDMTRFWGKLFGINFALGVATG 70 A+ + +H L LT+ + +E V + Y + R L + G G Sbjct: 16 VAIVSAFHVLASHLTVAAAWFNLYLERRAVYEQRPELYVYLKRSALGLLVFAYVFGAMAG 75 Query: 71 LTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVT 130 + + + + F E M F ++ + +++ + R++ HL + Sbjct: 76 VGIWQTTTAANPRGISTLIHNFVFYWGAEWYM-FLIDVVGIIAYYYSFDRVSPRIHLRLA 134 Query: 131 WLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 W++A G + I+ + P L +E + FNP + + Sbjct: 135 WILALGGTGTLTIIVGILSFKLTP--------GLWLETGNSLNGFFNPTFWPQILLRFSL 186 Query: 191 GYVTGAMFIMAIS 203 + A + + IS Sbjct: 187 MFTITAAWALLIS 199 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 8/116 (6%) Query: 394 VGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAI 453 +G ++ L L T R +I +W ++ L +LP P++A +GW TE GRQPW + Sbjct: 1 MGWSVGSGVLALAGLWVTRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWVV 60 Query: 454 QDI--------LPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP 501 L A S +T +AFSL+ +Y + + L+++Y GP Sbjct: 61 VPNPNGDQSIRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea RepID=A4WI49_PYRAR Length = 368 Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 101/347 (29%), Gaps = 15/347 (4%) Query: 1 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60 M + + + L H LF +TLG + A + R K+ Sbjct: 1 MNEAVFIGFVGLGLAVTLHILFTAMTLGTGLIAAYYRWLAYRKNDAWSELFARKAFKVLI 60 Query: 61 INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120 ++ G + ++ + + P+A+ + + + ++ W + Sbjct: 61 VSELFSGVWGTIITVFLAGFFTALTTLATNALFIPIAIAIASI-MVRIPTIAISWYTWGK 119 Query: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180 ++ H L+ W++A + P + + T E NP+ Sbjct: 120 IHPKTHSLIMWVMALSGFGIPFGFRAIFAEINNPVAVGYYLQTGNNPGFMPYE---NPLF 176 Query: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 ++HTV A TG ++ + + + G L ++ L LG Sbjct: 177 WTLYLHTVAAVISTGGFVAASLMS--------LEKDPKGISTALKIGFLVLMAQLSLGPL 228 Query: 241 SAYEVAQVQPVKLAAM---EGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 ++ P+ ++ G A + Q + P + L Sbjct: 229 YWLSLSWYAPLLFNSVNTTFGPLFAIKLVAVATLFILGLQAYRKIKAGAAAPGYVKWLGP 288 Query: 298 HSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAF 344 +L V G YP + L + + + + Sbjct: 289 LALFIVVAGEVLNDGSHYPYMVIAGEKGLPATLFANFYMDIPMGAVY 335 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 1/112 (0%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 +++ L+R+QFA+T ++HF FVP ++G +F++AIME++YV TGK+ Y+ MT+FWG +F + Sbjct: 8 MNIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLL 67 Query: 62 NFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGL 113 +FA+GV TG+ F G ++S + + LA M F + V L Sbjct: 68 SFAVGVVTGI-FCFFIGYSYSSGPRPISSLPLGELASGFTMGFMIALLSVYL 118 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 42/77 (54%), Positives = 56/77 (72%) Query: 437 IEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKY 496 IE GWF+ E+GRQPWAI +ILP + S L+TG L FS+ +I LY F+I E+YLM KY Sbjct: 3 IECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMFKY 62 Query: 497 ARLGPSAMQSEQPTQQQ 513 ARLGPSA+++ + +Q Sbjct: 63 ARLGPSALKTGKYYFEQ 79 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 52/79 (65%) Query: 393 MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWA 452 M+ G L+ L+ A VQ LR K+ Q +LK+ LW LPLPWIAIE GWF+ E+GRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IQDILPTYSAHSALTTGQL 471 I +ILP + S L T + Sbjct: 61 IYEILPVGVSASNLNTNTI 79 >UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU8_CHIPD Length = 446 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 13/192 (6%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 ++ L H +FV L +G L E + Y K +N +L V G+ Sbjct: 32 ISFLAHIVFVNLMVGGSLLTLWAEIKGLK--DKDYDKFAYEMAKTITVNKSLAVVLGVAP 89 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLN--KYQHLLVTW 131 T +S Y + G + + + + L + W +L+ K H+ + Sbjct: 90 LLSINTLYSVYFYSANALTG-LMWISVIPLVTIAFLLTYLHKYSWYKLSDNKALHIAIVG 148 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 L L M +P + F + P +++H + A Sbjct: 149 AAVLIFLFIPLIFLVNINLMLFP--------EKWGTVGGFLSALVLPNVFPRYLHFIFAS 200 Query: 192 YVTGAMFIMAIS 203 +F+ + Sbjct: 201 LGVTGLFVFWYT 212 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 46/72 (63%) Query: 377 RGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIA 436 +P+V P+FW+ RIM G L+ IA+ + + RW L++ALW+LPLPWIA Sbjct: 1 MDTVPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIA 60 Query: 437 IEAGWFMTEFGR 448 IE GWF+ E+GR Sbjct: 61 IECGWFVAEYGR 72 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGI 61 D + L+R QFA +HF+F ++GL L ++E +++ TG+ +Y ++ R+W K+F + Sbjct: 5 LDPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAV 64 Query: 62 NFA 64 F Sbjct: 65 VFG 67 >UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B0F5_9RHOB Length = 152 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%) Query: 238 GDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILAT 297 GD + QP K+ +EG W+T+P P ++A P Q N F + IP ++ Sbjct: 21 GDMRGLNTLEYQPAKVTEIEGNWETDP-NIPLLLLAIPNQGTRSNNFEIAIPNGAPLILK 79 Query: 298 HSLDKPVPGLKNLMAET----YPRLQRGRMAWLLMQEISQGN 335 H + PG + + E +PR+ ++ ++ Sbjct: 80 HKANGLAPGHNDFVLEDSTIMHPRVSAVFFSFRIIIGTGVAM 121 >UniRef50_UPI0001744B64 putative Cytochrome-c oxidase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B64 Length = 447 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 69/231 (29%), Gaps = 17/231 (7%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 L L H FV L +G F++ E + + K + + K +N +L V G+ Sbjct: 38 LFFLLHIFFVNLMVGGSFMVVFFEYLGLRRKK--WDGLAYEVAKTVTVNKSLAVVLGIGP 95 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAME---ALMAFFLESTFVGLFFFGWQR-LNKYQHLLV 129 ++ + G + + AF L + W K HL V Sbjct: 96 LLCINLVYTVQWYGANALTGHAWLLIVPTVISAFLLAYLHKYTW-HAWDHGWRKKLHLAV 154 Query: 130 TWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVM 189 L+A L L M +P+ ++ F + +++H ++ Sbjct: 155 GVLMALHFLFIPLIFLANVNLMLFPS--------EWEKVRGFFSSLQIGNVFPRYLHFLL 206 Query: 190 AGYVTGAMFIMAISAWYLLRGRERNVALR--SFAIGSVFGTLAIIGTLQLG 238 A ++F++ G R + G Sbjct: 207 ASVALASLFMVGWFGRAGAAGALPQGFSRDDLRRTFYRAALVPTAAQFLAG 257 >UniRef50_C7LSV7 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSV7_DESBD Length = 355 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 82/265 (30%), Gaps = 23/265 (8%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 LT + H L + + LG + + + + GK +T+ A V G+ Sbjct: 26 LTFILHILVMNIMLGASVIALV----HHLRGKADTEALTKSISTKLPFTIAFAVNFGVAP 81 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY-QHLLVTWL 132 + + Y + A + + + + + + ++ + + + Sbjct: 82 LLFMQVLYGQFL-YTSSVLMAVYWLGIVG--LVIVAYASAYIYDFRYVPLGSLRTIFIAV 138 Query: 133 VAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFN---PVSQVKFVHTVM 189 ++A N +M P D + + N P +++H V Sbjct: 139 TTLCLLVTAFIFTNNMTFMLSPASWATYFD-------NPWGTLLNLSDPTVLPRYLHFVA 191 Query: 190 AGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQ 249 + + A++ +Y ++ + A R G + + + LG + + Sbjct: 192 SSIAVAGL---ALAIFYRIKVKNDPAAQRWVRHGMNWYAYTTMVQMALGLWFLSALPE-- 246 Query: 250 PVKLAAMEGEWQTEPAPAPFHVVAW 274 PVK + G A + Sbjct: 247 PVKHLLLGGSLPHTLIFAFSASLGI 271 >UniRef50_C8X0C5 Putative uncharacterized protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C5_DESRD Length = 357 Score = 48.2 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 70/230 (30%), Gaps = 16/230 (6%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 +T + H LF+ LG + + E G + I F + + G+ Sbjct: 26 VTFVLHLLFMNTMLGAGIIAFVDELRGGAQGGEGTVAEALSHKLTYIIAFTVNL--GVAP 83 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLV 133 + + YV + A + + L L+ F +QRL + ++ V Sbjct: 84 LLFLQVLYGQFI-YVSSVLIAVYWIAVVFLVILAYYLAYLYNFRYQRLAGARKWVIGSAV 142 Query: 134 AFGSNLSALWILNANGWMQYPTGAHFD---IDTLRMEMTSFSELVFNPVSQVKFVHTVMA 190 N M P + + ++ P +++H ++A Sbjct: 143 FLL-LAVGFVFTNNMTLMLRPEAWERYFASPGGMLLNLSD-------PTLIPRYLHFMVA 194 Query: 191 GYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 G +F+ +A + G + T A + + +G Sbjct: 195 SVAVGGLFVALWAA--KTAQPSTEQREQRINRGMQWFTYATLAQMVIGIW 242 >UniRef50_Q1K0H3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H3_DESAC Length = 352 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/206 (10%), Positives = 57/206 (27%), Gaps = 8/206 (3%) Query: 35 IMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGA 94 ++ + ++ + ++ + A + G+ + Y + Sbjct: 41 MLAIWAHFKREPVHERLAYKIAQVLPLLIAFAINFGVPPLLFVQVVYGHLI-YSSSVLMG 99 Query: 95 PLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYP 154 + + V ++ F + L + L + + A N M P Sbjct: 100 VFWLSVIPVLLTVYYAVYIYDFKFWSLGRRG-LPILMFAGVLMLMIAFLFSNNMTLMLTP 158 Query: 155 TGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERN 214 + +E P +++H ++ GA+ I + L ++ Sbjct: 159 ETWDIYFKNSSGTFLNLAE----PTLWPRYLHMLVGATAIGALVIALLG--RLWAKQDAE 212 Query: 215 VALRSFAIGSVFGTLAIIGTLQLGDS 240 V + +G + +G Sbjct: 213 VGELAQRVGLRVFLAVTCVQIMVGLW 238 >UniRef50_C0GRA3 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRA3_9DELT Length = 352 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 19/229 (8%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 LT + H L + LG+ + + ++ +G + + A + G+ Sbjct: 26 LTFIMHLLLMNSMLGMGIMALV---KHIKSGDKH-CPVCKDISLKLPYTIAFTINFGVAP 81 Query: 74 EFQFGTNWSFYSNYVGDIFGAPL--AMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTW 131 +S + + G + L+ F+ + ++ F + L+ LL Sbjct: 82 FLFLQVLYSQFIYTSSVLMGMYWLPVIALLLIFYYSA---YIYDFKYDSLS-RLKLLFLA 137 Query: 132 LVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAG 191 + + A N M P + M + + P +++H V+A Sbjct: 138 VTVIFGLIIAFLFTNNMTLMLNPEKWTGYFENRSGTMLNLGD----PTLIPRYLHFVLAS 193 Query: 192 YVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240 G + I R ++ A G + + A + + +G Sbjct: 194 IAVGGLATAII-----WRFKKDPRATEYIREGLSWFSYATLVQVAVGVW 237 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 28/52 (53%), Positives = 42/52 (80%) Query: 462 AHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513 A+S+LT G L FS+ +I GLYTLFL+AE++LM K+ARLGPS++++ + +Q Sbjct: 2 ANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 53 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 25/36 (69%), Positives = 30/36 (83%) Query: 111 VGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILN 146 +GLFFFGW RL+K +HLL T+ VAFGSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWIFG 36 >UniRef50_D1UBB9 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB9_9DELT Length = 348 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 12/191 (6%) Query: 15 TALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTME 74 T H LF+ LG + + + + R + L + LGVA L ++ Sbjct: 27 TFTAHILFMNALLGSAAIGLV---RALRGDGGLARAVGMKSPPLLALTINLGVAPLLFLQ 83 Query: 75 FQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVA 134 +G +YV + + + A + F FG+ ++ + L+ + Sbjct: 84 VNYGLF-----DYVSSVLMGGWWLAVIAALMVSYYGFYAFKFGYDSMSPARRTLLLAVSL 138 Query: 135 FGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVT 194 G+ AL + M P D ++ + P +F+H ++ Sbjct: 139 AGTLYVALMLSTNMTLMLRPEYWPQYFDKAGAAFLNWGD----PTIYPRFLHFMVGAAAI 194 Query: 195 GAMFIMAISAW 205 G +F+ + W Sbjct: 195 GGLFVALLGRW 205 >UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n=2 Tax=Geobacillus RepID=C9RX36_GEOSY Length = 65 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 2 WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG 44 +D + LSR LT +H ++ + +G+ ++AI + + + + Sbjct: 4 YDPVWLSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRSK 46 >UniRef50_B8DQZ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQZ1_DESVM Length = 381 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 58/188 (30%), Gaps = 6/188 (3%) Query: 14 LTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTM 73 LT + H LF+ + LG + + R AL V G+ Sbjct: 30 LTFVVHLLFMNVVLGTGVITLFRSLRTPFSPNDQINVDIRETAAWVPRAMALAVNFGVPP 89 Query: 74 EFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLV 133 + + Y I A + + + L+ G L + L+ V Sbjct: 90 LLFLQVLYGQFI-YPSSILMAVWWLGIVGFVMMAYYGFYLYGLGHAVLGPRRTLVAGISV 148 Query: 134 AFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYV 193 A ++A + N M P + + ++ E P +++H V+ Sbjct: 149 ALL-LVNAFVLTNNATLMLDPARWTGYAASPGGTLLNWGE----PSLVPRYLHMVVGAVA 203 Query: 194 TGAMFIMA 201 G +FI Sbjct: 204 VGGLFIAG 211 >UniRef50_UPI000186E483 hypothetical protein Phum_PHUM440230 n=1 Tax=Pediculus humanus corporis RepID=UPI000186E483 Length = 544 Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 14/102 (13%) Query: 141 ALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIM 200 +WIL +MQ G F +L +SF +F H ++ +I+ Sbjct: 7 LVWILVIIAFMQGTIGIAFVSTSLYANHSSFLNTLF------IIPHVML--------YIL 52 Query: 201 AISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSA 242 + + L+ R+ + + + + + Sbjct: 53 GVLLIFTLKTRDPKYVRLAALLFVINALIGFAAGILYLGHYM 94 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.133 0.372 Lambda K H 0.267 0.0407 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,873,108,780 Number of Sequences: 3077464 Number of extensions: 127071201 Number of successful extensions: 643815 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 459 Number of HSP's successfully gapped in prelim test: 616 Number of HSP's that attempted gapping in prelim test: 640397 Number of HSP's gapped (non-prelim): 2160 length of query: 514 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 381 effective length of database: 631,093,644 effective search space: 240446678364 effective search space used: 240446678364 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 95 (41.2 bits)