BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (339 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AEG0 Dipeptide transport system permease protein dppB... 674 0.0 UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria Rep... 460 e-128 UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH 355 9e-97 UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella l... 314 3e-84 UniRef50_P94311 Dipeptide transport system permease protein dppB... 304 3e-81 UniRef50_B9L1W1 Dipeptide transport system permease protein dppB... 303 4e-81 UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette t... 294 3e-78 UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport... 280 6e-74 UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport... 277 4e-73 UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepI... 275 1e-72 UniRef50_D1B7J8 Binding-protein-dependent transport systems inne... 274 3e-72 UniRef50_A9B5L6 Binding-protein-dependent transport systems inne... 272 1e-71 UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport... 270 7e-71 UniRef50_B8E2R5 Binding-protein-dependent transport systems inne... 269 9e-71 UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipep... 267 5e-70 UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Ta... 266 8e-70 UniRef50_Q0T6D1 Glutathione transport system permease protein gs... 265 1e-69 UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteri... 264 3e-69 UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, memb... 261 2e-68 UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport... 261 2e-68 UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oc... 260 5e-68 UniRef50_A6TPC4 Binding-protein-dependent transport systems inne... 259 8e-68 UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzi... 259 1e-67 UniRef50_C9M8R7 Glutathione ABC transporter, permease protein Gs... 259 1e-67 UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepI... 258 2e-67 UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerot... 256 7e-67 UniRef50_B9JNQ5 Dipeptide ABC transporter n=8 Tax=Rhizobiales Re... 256 9e-67 UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Ta... 255 1e-66 UniRef50_UPI00019735EB peptide ABC transporter permease protein ... 254 3e-66 UniRef50_D2LLS4 Binding-protein-dependent transport systems inne... 254 3e-66 UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Ba... 254 4e-66 UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT f... 253 5e-66 UniRef50_Q28JR5 Binding-protein-dependent transport systems inne... 253 1e-65 UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport... 252 2e-65 UniRef50_D1C9E9 Binding-protein-dependent transport systems inne... 251 3e-65 UniRef50_Q47XM7 Peptide ABC transporter, permease protein n=1 Ta... 251 3e-65 UniRef50_Q1ARP2 Binding-protein-dependent transport systems inne... 250 4e-65 UniRef50_A6X362 Binding-protein-dependent transport systems inne... 250 5e-65 UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipe... 249 7e-65 UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepI... 249 8e-65 UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacte... 249 1e-64 UniRef50_D2ASJ6 Binding-protein-dependent transport systems inne... 248 2e-64 UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=... 248 2e-64 UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax... 248 2e-64 UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobac... 248 2e-64 UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Breviba... 248 3e-64 UniRef50_C7R6C9 Binding-protein-dependent transport systems inne... 246 8e-64 UniRef50_D1WR30 Binding-protein-dependent transport systems inne... 245 2e-63 UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncult... 244 2e-63 UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteob... 244 3e-63 UniRef50_D1Y6N0 Oligopeptide transport system permease protein A... 244 3e-63 UniRef50_C6A3B4 ABC-type dipeptide transport system, permease co... 243 5e-63 UniRef50_B2SC63 Binding-protein-dependent transport systems inne... 243 1e-62 UniRef50_A7NQN2 Binding-protein-dependent transport systems inne... 243 1e-62 UniRef50_B9ZI20 Binding-protein-dependent transport systems inne... 242 1e-62 UniRef50_A6M0G0 Binding-protein-dependent transport systems inne... 241 3e-62 UniRef50_B9L4I6 Oligopeptide transport system permease protein A... 241 4e-62 UniRef50_A8U4H5 Binding-protein-dependent transport systems inne... 241 4e-62 UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostri... 240 5e-62 UniRef50_Q3J951 ABC transporter, inner membrane subunit n=9 Tax=... 240 7e-62 UniRef50_A1WN48 Binding-protein-dependent transport systems inne... 239 7e-62 UniRef50_B9LRN3 Binding-protein-dependent transport systems inne... 239 8e-62 UniRef50_D1C9Y6 Binding-protein-dependent transport systems inne... 239 1e-61 UniRef50_A3ZVY1 Oligopeptide ABC transporter permease protein n=... 238 2e-61 UniRef50_D1C3Y0 Binding-protein-dependent transport systems inne... 238 3e-61 UniRef50_A0QRE3 Dipeptide transport system permease protein DppB... 237 4e-61 UniRef50_D1C940 Binding-protein-dependent transport systems inne... 236 6e-61 UniRef50_P42062 Oligopeptide transport system permease protein a... 236 7e-61 UniRef50_Q11FN3 Binding-protein-dependent transport systems inne... 236 8e-61 UniRef50_A8TW72 Peptide ABC transporter, permease protein n=1 Ta... 236 9e-61 UniRef50_P77308 Probable D,D-dipeptide transport system permease... 235 2e-60 UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Ta... 235 2e-60 UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteri... 234 2e-60 UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=... 234 3e-60 UniRef50_A1WQT8 Binding-protein-dependent transport systems inne... 234 4e-60 UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD 233 5e-60 UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport... 233 7e-60 UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11... 233 9e-60 UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bact... 232 1e-59 UniRef50_Q1GD19 Binding-protein-dependent transport systems inne... 232 2e-59 UniRef50_A7LH29 Dipeptide ABC transporter dppB (Fragment) n=1 Ta... 231 2e-59 UniRef50_A9EE52 Binding-protein-dependent transport systems inne... 231 2e-59 UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC trans... 231 3e-59 UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerot... 230 4e-59 UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport... 230 5e-59 UniRef50_A8F7V7 Binding-protein-dependent transport systems inne... 230 6e-59 UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID... 229 1e-58 UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostri... 228 2e-58 UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 ... 228 3e-58 UniRef50_A6TS96 Binding-protein-dependent transport systems inne... 228 3e-58 UniRef50_D1CA61 Binding-protein-dependent transport systems inne... 228 3e-58 UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC trans... 228 3e-58 UniRef50_B6JJN3 Dipeptide transport system permease protein DppB... 227 4e-58 UniRef50_D1VVB3 Dipeptide ABC transporter, permease protein DppB... 227 4e-58 UniRef50_C7P3N9 Binding-protein-dependent transport systems inne... 226 6e-58 UniRef50_A8F6T0 Binding-protein-dependent transport systems inne... 225 2e-57 UniRef50_C8WR99 Binding-protein-dependent transport systems inne... 224 2e-57 UniRef50_C6AV34 Binding-protein-dependent transport systems inne... 224 3e-57 UniRef50_C5BVI8 Binding-protein-dependent transport systems inne... 224 3e-57 UniRef50_Q211A7 Binding-protein-dependent transport systems inne... 224 4e-57 UniRef50_B2JY51 Binding-protein-dependent transport systems inne... 224 4e-57 UniRef50_B3TCI4 Putative binding-protein-dependent transport sys... 223 7e-57 UniRef50_A4F975 ABC-transport protein, membrane component n=2 Ta... 223 7e-57 UniRef50_A1WJE8 Binding-protein-dependent transport systems inne... 223 1e-56 UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9A... 222 1e-56 UniRef50_Q2YJK1 Putative peptide transport system permease prote... 222 1e-56 UniRef50_UPI0001C354AE putative ABC-transporter permease protein... 222 2e-56 UniRef50_Q15RH3 Binding-protein-dependent transport systems inne... 222 2e-56 UniRef50_D1CFB1 Binding-protein-dependent transport systems inne... 221 2e-56 UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteo... 221 2e-56 UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collins... 221 3e-56 UniRef50_Q2CJD0 Putative dipeptide transport system permease pro... 221 3e-56 UniRef50_B9ZIB5 Binding-protein-dependent transport systems inne... 221 4e-56 UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclass... 221 4e-56 UniRef50_A0KYK9 Binding-protein-dependent transport systems inne... 221 4e-56 UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizob... 220 5e-56 UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter... 220 6e-56 UniRef50_A4J1I5 Binding-protein-dependent transport systems inne... 220 7e-56 UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostri... 219 8e-56 UniRef50_Q11FQ8 Binding-protein-dependent transport systems inne... 219 1e-55 UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette t... 219 1e-55 UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 ... 219 1e-55 UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport... 219 2e-55 UniRef50_A0LI52 Binding-protein-dependent transport systems inne... 218 2e-55 UniRef50_A6UJI8 Binding-protein-dependent transport systems inne... 218 2e-55 UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 T... 218 3e-55 UniRef50_D0LZL0 Binding-protein-dependent transport systems inne... 218 3e-55 UniRef50_A1S0Q2 Binding-protein-dependent transport systems inne... 218 3e-55 UniRef50_B9KWU4 Binding-protein-dependent transport systems inne... 218 4e-55 UniRef50_A9WKA7 Binding-protein-dependent transport systems inne... 217 4e-55 UniRef50_B3EH22 Binding-protein-dependent transport systems inne... 217 4e-55 UniRef50_Q53191 Probable peptide ABC transporter permease protei... 216 6e-55 UniRef50_Q1LMX8 Binding-protein-dependent transport systems inne... 216 7e-55 UniRef50_B3TC47 Putative binding-protein-dependent transport sys... 216 8e-55 UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bact... 216 8e-55 UniRef50_D2R8I2 Binding-protein-dependent transport systems inne... 216 9e-55 UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bactero... 216 9e-55 UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein A... 216 1e-54 UniRef50_Q5QUD4 ABC-type dipeptide transport systems, permease c... 216 1e-54 UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n... 215 2e-54 UniRef50_C6DGJ5 Binding-protein-dependent transport systems inne... 215 2e-54 UniRef50_A8IE65 Peptide ABC transporter permease protein n=6 Tax... 214 4e-54 UniRef50_A6X1T0 Binding-protein-dependent transport systems inne... 214 4e-54 UniRef50_C5ET18 Oligopeptide transport system permease protein a... 214 4e-54 UniRef50_UPI0001C31351 binding-protein-dependent transport syste... 214 5e-54 UniRef50_A9BP21 Binding-protein-dependent transport systems inne... 213 5e-54 UniRef50_B9ZIL3 Binding-protein-dependent transport systems inne... 213 6e-54 UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n... 213 7e-54 UniRef50_A3I8F4 ABC transporter, membrane spanning protein (Olig... 213 7e-54 UniRef50_C6CBH4 Binding-protein-dependent transport systems inne... 213 7e-54 UniRef50_C7NEE9 Alkaline phosphatase n=14 Tax=Bacteria RepID=C7N... 213 1e-53 UniRef50_A1SP55 Binding-protein-dependent transport systems inne... 212 1e-53 UniRef50_C8Q8F0 Binding-protein-dependent transport systems inne... 212 1e-53 UniRef50_UPI0001C31411 binding-protein-dependent transport syste... 212 1e-53 UniRef50_C7NYL3 Binding-protein-dependent transport systems inne... 212 2e-53 UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bac... 211 2e-53 UniRef50_UPI0001C313C7 binding-protein-dependent transport syste... 211 2e-53 UniRef50_B3QZ99 Binding-protein-dependent transport systems inne... 211 2e-53 UniRef50_Q11BX9 Binding-protein-dependent transport systems inne... 211 3e-53 UniRef50_Q28KP0 Binding-protein-dependent transport systems inne... 211 4e-53 UniRef50_UPI0001C32156 binding-protein-dependent transport syste... 211 4e-53 UniRef50_Q28TH0 Binding-protein-dependent transport systems inne... 210 5e-53 UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropy... 210 5e-53 UniRef50_A3JXK8 ABC transporter permease protein n=1 Tax=Sagittu... 210 5e-53 UniRef50_A1AYK8 Binding-protein-dependent transport systems inne... 210 7e-53 UniRef50_Q6ML30 Dipeptide transport system permease protein DppB... 209 8e-53 UniRef50_C8WQ73 Binding-protein-dependent transport systems inne... 209 1e-52 UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n... 209 1e-52 UniRef50_C9RPN3 Binding-protein-dependent transport systems inne... 209 1e-52 UniRef50_C1XGM8 ABC-type dipeptide/oligopeptide/nickel transport... 209 1e-52 UniRef50_B1XIM7 Binding-protein-dependent transport systems inne... 209 1e-52 UniRef50_Q2FMZ9 Binding-protein-dependent transport systems inne... 209 2e-52 UniRef50_A8F7C8 Binding-protein-dependent transport systems inne... 209 2e-52 UniRef50_A0R7D2 Dipeptide transport system permease protein DppB... 209 2e-52 UniRef50_C0ZIB9 Dipeptide ABC transporter permease protein n=35 ... 208 2e-52 UniRef50_D1C147 Binding-protein-dependent transport systems inne... 208 3e-52 UniRef50_B9JQI2 Inner membrane component of binding-protein-depe... 208 3e-52 UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n... 208 3e-52 UniRef50_Q213C0 Binding-protein-dependent transport systems inne... 207 3e-52 UniRef50_C0GIS4 Binding-protein-dependent transport systems inne... 207 3e-52 UniRef50_P0AGH4 Peptide transport system permease protein sapB n... 207 3e-52 UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41... 207 4e-52 UniRef50_Q7MLN8 ABC-type antimicrobial peptide transport system,... 207 4e-52 UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligo... 206 7e-52 UniRef50_D2RRT8 Binding-protein-dependent transport systems inne... 206 9e-52 UniRef50_Q3A9M3 Oligopeptide ABC transporter, permease protein n... 206 9e-52 UniRef50_Q11KW1 Binding-protein-dependent transport systems inne... 206 1e-51 UniRef50_A1B070 Binding-protein-dependent transport systems inne... 206 1e-51 UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter... 206 1e-51 UniRef50_A3SZ64 ABC-transport protein, inner membrane component ... 206 1e-51 UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component... 205 2e-51 UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Acidul... 205 2e-51 UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease... 204 3e-51 UniRef50_B8FV32 Binding-protein-dependent transport systems inne... 204 4e-51 UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostri... 204 4e-51 UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 ... 204 4e-51 UniRef50_C0GHX4 Binding-protein-dependent transport systems inne... 204 5e-51 UniRef50_D1TC03 Dipeptide transport protein 1 (ABC superfamily, ... 204 5e-51 UniRef50_Q0FJT7 Binding-protein-dependent transport systems inne... 203 8e-51 UniRef50_C1SMU0 ABC-type dipeptide/oligopeptide/nickel transport... 203 8e-51 UniRef50_Q28NH1 Binding-protein-dependent transport systems inne... 202 1e-50 UniRef50_C1VE95 ABC-type dipeptide/oligopeptide/nickel transport... 202 1e-50 UniRef50_Q6D2Y2 ABC transporter permease protein n=2 Tax=Pectoba... 202 1e-50 UniRef50_C5A565 Oligopeptide/dipeptide ABC transporter, permease... 202 1e-50 UniRef50_Q5V0Q6 Oligopeptide ABC transporter permease protein n=... 202 1e-50 UniRef50_B2A0S4 Binding-protein-dependent transport systems inne... 202 2e-50 UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=... 202 2e-50 UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B... 201 2e-50 UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax... 201 3e-50 UniRef50_D1C2E3 Binding-protein-dependent transport systems inne... 201 3e-50 UniRef50_B8J041 Binding-protein-dependent transport systems inne... 201 3e-50 UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligo... 201 4e-50 UniRef50_A3VG50 Dipeptide transport system permease protein dppB... 201 4e-50 UniRef50_B9L3G1 Dipeptide transport system permease protein DppB... 200 5e-50 UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Ta... 200 6e-50 UniRef50_UPI0001C31B38 binding-protein-dependent transport syste... 200 6e-50 UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease... 200 7e-50 UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligo... 200 7e-50 UniRef50_A6TTE0 Binding-protein-dependent transport systems inne... 199 8e-50 UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdema... 199 8e-50 UniRef50_Q11Q48 Dipeptide ABC transporter, permease component n=... 199 9e-50 UniRef50_Q67KR8 Oligopeptide ABC transporter permease protein n=... 199 9e-50 UniRef50_Q5E4F5 Oligopeptide transport system permease protein O... 199 1e-49 UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Ta... 199 2e-49 UniRef50_A1WMS2 Binding-protein-dependent transport systems inne... 199 2e-49 UniRef50_D0GM08 Oligopeptide ABC transporter, permease protein A... 198 2e-49 UniRef50_B9LWF0 Binding-protein-dependent transport systems inne... 198 3e-49 UniRef50_Q5LPL4 Dipeptide ABC trasnporter, permease protein n=1 ... 198 3e-49 UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicu... 197 5e-49 UniRef50_B5JCD3 ABC transporter, permease protein n=1 Tax=Octade... 197 6e-49 UniRef50_A9B1I7 Binding-protein-dependent transport systems inne... 197 7e-49 UniRef50_B6FU31 Putative uncharacterized protein n=1 Tax=Clostri... 196 1e-48 UniRef50_A9EXW6 Binding-protein-dependent transport systems inne... 196 1e-48 UniRef50_B3DQR2 ABC-type dipeptide/oligopeptide/nickel transport... 196 1e-48 UniRef50_A4ALV3 ABC transporter, membrane spanning protein (Dipe... 196 1e-48 UniRef50_Q11EZ9 Binding-protein-dependent transport systems inne... 195 2e-48 UniRef50_D2LY63 Binding-protein-dependent transport systems inne... 195 2e-48 UniRef50_O58538 323aa long hypothetical oligopeptide transport p... 195 2e-48 UniRef50_A8TZ97 D-Ala-D-Ala transporter subunit n=1 Tax=alpha pr... 195 2e-48 UniRef50_A9CKU6 ABC transporter, membrane spanning protein (Agro... 194 3e-48 UniRef50_A6DGV5 ABC-type dipeptide/oligopeptide/nickel transport... 194 3e-48 UniRef50_Q0RX95 ABC peptide transporter, permease component n=1 ... 194 3e-48 UniRef50_A5EEY0 Putative ABC transporter, permease protein n=1 T... 194 3e-48 UniRef50_P24138 Oligopeptide transport system permease protein o... 194 5e-48 UniRef50_Q89XK2 Peptide ABC transporter permease protein n=2 Tax... 194 5e-48 UniRef50_D1A2R5 Binding-protein-dependent transport systems inne... 193 6e-48 UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane c... 193 6e-48 UniRef50_D1C490 Binding-protein-dependent transport systems inne... 193 7e-48 UniRef50_Q18K39 ABC-type dipeptide/oligopeptide/nickel transport... 193 7e-48 UniRef50_D0B8C5 Binding-protein-dependent transport system inner... 192 1e-47 >UniRef50_P0AEG0 Dipeptide transport system permease protein dppB n=302 Tax=Bacteria RepID=DPPB_ECO57 Length = 339 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK Sbjct: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL Sbjct: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA Sbjct: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 >UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria RepID=A6VRH6_MARMS Length = 336 Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust. Identities = 217/339 (64%), Positives = 281/339 (82%), Gaps = 3/339 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI RRL LVIPTFIGITLLTF + +IPGDP+ +MAGERG+S ERHA+L A+LG D+ Sbjct: 1 MFQFIFRRLSLVIPTFIGITLLTFTLIRLIPGDPIEVMAGERGVSAERHAELSAQLGFDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY HY+ GV+ GDLG S+ +R PV +EF+ F AT+EL CA IFA +G+P G+ Sbjct: 61 PLYVQYYHYVTGVLQGDLGNSLITREPVMKEFLTLFPATIELAFCAAIFAILIGLPAGIF 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRG++ DH+ + +LTGYSMPIFWW ++L+++ SV+ TPVSGR+ + ++DD Sbjct: 121 AAVKRGTVIDHSVMTFSLTGYSMPIFWWALLLMLVFSVNLGWTPVSGRIDVVYWIDD--- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGFMLID+ + GE+G F AV+H+ILP+IVLGTIP+AVI RMTRSSMLEVL EDYIRTA Sbjct: 178 VTGFMLIDSILSGEEGAFASAVSHLILPSIVLGTIPMAVIARMTRSSMLEVLSEDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI++HALRNA++PV+TVIGLQVG LL+GAILTET+F+WPG+G+WLI+++ R Sbjct: 238 RAKGIAPWRVIVIHALRNALIPVITVIGLQVGILLSGAILTETVFAWPGIGKWLIESIGR 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGG+L+VA +II+VNLLVD+ YG+VNPRIRH + Sbjct: 298 RDYPVVQGGILIVACIIIVVNLLVDITYGIVNPRIRHSR 336 >UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH Length = 389 Score = 355 bits (912), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 192/318 (60%), Positives = 235/318 (73%), Gaps = 16/318 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+L+RLGL+IPTF GITL+TF + MIPGDPV +M GER + P HA+ + LGLDK Sbjct: 1 MLSFVLKRLGLLIPTFFGITLITFGLIRMIPGDPVEVMMGERRVDPVMHAEAMHRLGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY Y+ + G+ G S+ +R VW+EFV F AT+EL AM+FA +G+ GVL Sbjct: 61 PLPAQYFDYVSSLAQGNFGESLVTRESVWKEFVTLFPATVELSAAAMLFAIVLGLLAGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRGSIFDH +GL+LTG+SMPIFWWG++LIM SV TPVSGR+ D+++ D P Sbjct: 121 AAIKRGSIFDHGVMGLSLTGFSMPIFWWGLILIMFFSVSLGWTPVSGRI-DLMY--DIEP 177 Query: 181 LTGFMLIDTAIWGED--------GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 TGFMLIDT W + G F DA+ H+ILPAIVLGTIPLAVI RMTRSSMLEVL Sbjct: 178 QTGFMLIDT--WRAEMLDPELNAGAFRDALMHLILPAIVLGTIPLAVIARMTRSSMLEVL 235 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 EDYIRTARAKGL+ +RV+ VHALRNA++PV+TVIGLQVG LLAGA+LTETIFSWPG R Sbjct: 236 REDYIRTARAKGLSPLRVVFVHALRNALIPVLTVIGLQVGVLLAGAVLTETIFSWPG-HR 294 Query: 293 WLIDALQRRDYPVVQGGV 310 + D +R P + GG Sbjct: 295 QMAD--RRHQPPRLPGGA 310 >UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGF2_EGGLE Length = 339 Score = 314 bits (804), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 163/339 (48%), Positives = 234/339 (69%), Gaps = 8/339 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++IL+R+ +VIP +G+T++ F ++ DP ++ GE + E A A+ GLD Sbjct: 1 MLKYILKRILMVIPVLLGVTVIIFLITRVLAPDPAPVVLGEHATT-EAMAAWRADNGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY+++I G + G+LG S + PV E RF AT EL +CA+I A+ VG+ +GVL Sbjct: 60 PIWLQYINFIVGALQGNLGTSYYTHQPVTAEIAARFPATAELAICAIIVASIVGVALGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS--VHWNLTPVSGRVSDMVFLDDS 178 AAVK+ D+ ++ +AL G SMPIFW G++LI+L S +HW P SGRVS ++ Sbjct: 120 AAVKKNKAADNVSMLIALVGVSMPIFWSGILLILLFSGILHW--LPSSGRVSPLL---QP 174 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + TGF ++DT + G D + H+ILP + L +A+I RMTRSSMLE L DYIR Sbjct: 175 SGGTGFFILDTIMQGNWAGLADVLVHLILPTLALSLYSMAIITRMTRSSMLETLNADYIR 234 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL++ V I HALRNAMLPV TVIGLQ G+LL GA+LTET+F+WPG+G++ +D + Sbjct: 235 TARAKGLSKGSVNIKHALRNAMLPVSTVIGLQFGSLLGGALLTETVFAWPGIGKFAVDCV 294 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 + D+PVVQG VLLVA + +++NL+VD++Y ++PRI++ Sbjct: 295 LKSDFPVVQGIVLLVAVIFVIMNLVVDIVYAYLDPRIKY 333 >UniRef50_P94311 Dipeptide transport system permease protein dppB n=8 Tax=Bacteria RepID=DPPB_BACPF Length = 333 Score = 304 bits (778), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 229/337 (67%), Gaps = 4/337 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RRL L+IP IG+T++TF+ +H+IPG+P + GE+ SP+ A L LGL++ Sbjct: 1 MLAYAMRRLLLLIPVLIGMTIVTFSIIHLIPGNPAQTILGEQA-SPQAIADLEERLGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W QY Y+ + GDLG S+++ P+ EE P AT+EL + AMIFA +G+ G++ Sbjct: 60 PYWVQYGLYMKDLATGDLGTSLRTNKPIMEEIWPYLAATIELTIFAMIFAIIIGVNAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ S FD+ ++ +AL G SMPIFW +M + + P GR + D Sbjct: 120 SAWKQNSWFDYLSMFIALVGVSMPIFWLALMEQWIFAQELGWLPAFGRDNPR---DPIIS 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG + DT I G+ +++ H+ILP I LGTIP+A+I RMTRSSMLEVL DYIRT Sbjct: 177 TTGLYVFDTIISGQFDKTWESIKHLILPGIALGTIPMAIIARMTRSSMLEVLRSDYIRTV 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG + VI HAL+NA++PV+TV+GLQ G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 237 NAKGSGQGVVIYKHALKNALIPVLTVVGLQTGNLLGGAILTETIFSWPGIGRYIFEAINY 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+Q G+L+VAT+ +L+NL VDLLY ++PRI++ Sbjct: 297 RDYPVIQSGILVVATIFVLINLFVDLLYSYIDPRIKY 333 >UniRef50_B9L1W1 Dipeptide transport system permease protein dppB n=3 Tax=Bacteria RepID=B9L1W1_THERP Length = 338 Score = 303 bits (777), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 231/336 (68%), Gaps = 5/336 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL-GLDKP 61 +F+LRRL + +P +G+TL+TFA H+IP DP+M + ER + + Q+ E GLD+ Sbjct: 4 RFVLRRLLVTMPLLVGVTLVTFAVSHLIPADPLMAILPERAANDPQTVQMYRERWGLDRS 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QYL Y+ ++ GDLG S SR PV ++ RF AT+EL + AM++A +G+ +GVL+ Sbjct: 64 LPEQYLFYLRNLLRGDLGESYTSRRPVMQDLRERFPATVELALAAMLYAVTLGLTLGVLS 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ DH A +AL G S+P+FW G++ + L + L P GR+ + + P Sbjct: 124 AIWYERWIDHVARLVALVGVSLPVFWLGLLALQLFYANLRLLPGPGRIDPRL---TAPPF 180 Query: 182 -TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TGF ID+ + G+ F++ ++H++LP +VLG+ + +I RMTRS++L+VLG DYIRTA Sbjct: 181 RTGFYTIDSLLAGDWSLFLNVLSHLVLPGMVLGSYAMGIIARMTRSALLDVLGADYIRTA 240 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RVI+VHALRNA++P VTVIGL G+LLAGA+LTETIF+WPG+GR+ +DA + Sbjct: 241 RAKGLAERRVILVHALRNALIPTVTVIGLTFGSLLAGAVLTETIFAWPGIGRYAVDAAMK 300 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P V G LL+A + ++VN L D+LYG+++PRIR Sbjct: 301 LDLPAVLGVTLLIAVVYVVVNFLTDVLYGMLDPRIR 336 >UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein n=5 Tax=Bacteria RepID=A8FB89_BACP2 Length = 348 Score = 294 bits (753), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 229/340 (67%), Gaps = 10/340 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 + + ++R G++IP IG+TL+ F+ + IPG+P ++ G+R + E QL +LGL++ Sbjct: 16 LFAYCMKRAGMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRA-TKEAVEQLTIQLGLNQ 74 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY HY+ G++ GDLG S+++ + +E P ATLEL AM+ A VG+ G++ Sbjct: 75 PWYVQYGHYMLGLLKGDLGTSIRTGAAIAQEMKPYLFATLELTFFAMVLAIVVGVNAGII 134 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A + S FD+ A+ +AL G SMPIFW G+M L S+ W + P +GR + NP Sbjct: 135 SAWFKHSFFDYVAMFIALIGVSMPIFWLGLMGQWLFSIEWGILPTTGRE------NVRNP 188 Query: 181 LTGFMLI---DTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + I DT + G F D++ H+ILP+ L TIP A+I R+TR+SMLEVL D+I Sbjct: 189 VESITYIHTLDTLLQGRFDQFTDSIKHLILPSTALATIPAAIIARITRASMLEVLHSDFI 248 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTA+AKG+ +I H L+NA++P++T+IGLQ G LL GAILTETIF+WPG+GR++ DA Sbjct: 249 RTAKAKGVRSFFIIYQHGLKNALIPILTIIGLQTGLLLGGAILTETIFAWPGIGRYIYDA 308 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 + RDYPV+Q G+L+VA + +L+N +VD+LY V++PRI++ Sbjct: 309 ISYRDYPVIQTGILVVALIFVLINFIVDILYAVIDPRIKY 348 >UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=17 Tax=Bacteria RepID=B7GIJ6_ANOFW Length = 354 Score = 280 bits (716), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 155/338 (45%), Positives = 233/338 (68%), Gaps = 4/338 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + ++RL VIP +G++L+ F + IPG+P ++ G++ + E L +LGLD+ Sbjct: 21 MFSYTVKRLLTVIPVLLGMSLVVFFMIRAIPGNPAQVILGQKA-TKEAVEALTHKLGLDQ 79 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY+ Y+ G++ GDLG S+++ + V +E P ATLEL + AM A +G+ G++ Sbjct: 80 PWYVQYIKYLGGLLKGDLGESLRTGVAVSQEIWPYLAATLELSLAAMFIAVVIGVNAGII 139 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A + S FD+ A+ LAL G SMPIFW G+M + +++ + P SGR D+ + P Sbjct: 140 SAWFQNSWFDYVAMVLALVGVSMPIFWLGLMEQWIFAINLDWFPTSGR-EDV--RNPIEP 196 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T +IDT + G F+ + H++LP++ L TIP+A+I RMTRSSMLEV+ DYIRTA Sbjct: 197 ITHLYVIDTLMQGHTDQFVQTLQHLVLPSVALATIPMAIIARMTRSSMLEVMKSDYIRTA 256 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ H+L+NA++PV+TVIGLQ+G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 257 RAKGLSMFWVVYKHSLKNAIIPVLTVIGLQMGLLLGGAILTETIFSWPGIGRYIYEAIGY 316 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q G+L+VA + I +NL+VDLLY ++PRI++ Sbjct: 317 RDYPVIQSGILIVAMIFIFINLIVDLLYAAIDPRIKYN 354 >UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein n=7 Tax=Halobacteriaceae RepID=Q18HF1_HALWD Length = 347 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 154/345 (44%), Positives = 214/345 (62%), Gaps = 12/345 (3%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+ RR+ L++P G+ L F+ + + PGDP I+ G+R S ++ AQ+ +ELGL+ P+ Sbjct: 5 RFLFRRVLLLVPVLFGVATLVFSILQLAPGDPARIIVGQRA-SAQQVAQVRSELGLNDPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMK--SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY+ ++ D G S K PV R TLEL + I +GIP+GV+ Sbjct: 64 WVQYIRFLIDAATFDFGQSYKIAQGEPVQNVLASRLPVTLELAIYGQITGILLGIPLGVI 123 Query: 121 AAVKRGSIFDH-TAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD-- 177 +AVK+ S+ DH T VG ALTG S+PIFW G +LI+L S + P SGR+ +FL + Sbjct: 124 SAVKQDSLTDHLTRVG-ALTGISVPIFWSGPLLILLFSTFLGILPTSGRIGSTIFLSEQW 182 Query: 178 -----SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 PLTG + IDT + GE FI AV H++LP +VLG +A++ RM RSSMLEV+ Sbjct: 183 SLFGMELPLTGMVTIDTLLLGEFDAFISAVRHLLLPVLVLGIYQMALLSRMMRSSMLEVV 242 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 +DY+RTARAKG I+ H +NA++PVVTVIG+Q GTLL GA+LTET+F G+G Sbjct: 243 RQDYMRTARAKGQGAKITILKHGFQNALIPVVTVIGIQFGTLLGGAVLTETVFGIGGIGT 302 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 L+ A+ DYP+VQG VL A + VN VD+ Y ++PRI Sbjct: 303 MLVSAIGASDYPLVQGTVLTFALLFTFVNFGVDITYSYLDPRIDQ 347 >UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepID=A8F3B0_THELT Length = 320 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/337 (44%), Positives = 205/337 (60%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL IPT + L F + MIPGDP M++ G + PE A+ +LGLDK Sbjct: 1 MTKYIIKRLLQAIPTLFFVILTVFLIMKMIPGDPAMVLLGPQA-GPEDIARFRQQLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GDLG S+ R V R T+ L +CA+ A +GIP G+L Sbjct: 60 PVIVQFFLYLKRILTGDLGTSLVYRQDVLSLIFERLPTTIILSICALFIAIVIGIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K S D L+L G S+PIFW+GM+LI++ S+ P G Sbjct: 120 AAIKHNSFVDLLVTSLSLIGISIPIFWFGMVLIIIFSLQLGWLPAVG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG +IW D ++H ILP++ LG + I R TRSSMLEVL +DYIRTA Sbjct: 167 -TGDF--SKSIW-------DGLSHFILPSLALGILSTGTIARFTRSSMLEVLNQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HALRNA++PV+TVIGLQ+G LLAGA+LTET+F+ PGLG+ ++D + R Sbjct: 217 YAKGLRRHLILYRHALRNALIPVITVIGLQLGNLLAGAVLTETVFALPGLGKLMVDGIFR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +VQG VL A M I VNL VD+ Y +NP++R Sbjct: 277 RDYMLVQGEVLFTAMMYIFVNLAVDITYAFINPKVRQ 313 >UniRef50_D1B7J8 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=D1B7J8_THEAS Length = 308 Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 143/340 (42%), Positives = 224/340 (65%), Gaps = 34/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q++LR+L + IP G+ + F + ++PGDP IM G+RG PE A++ A+LGLDK Sbjct: 1 MFQYVLRKLLVSIPVVWGVVTVIFILMAVVPGDPARIMMGQRG-DPETLARIRADLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GDLG S ++ PV + RF T+ L + ++ AT VG+ G++ Sbjct: 60 PLTVQYVDFLSKLVRGDLGKSYRTNEPVSKAIGERFGVTMRLAIWCIVLATIVGVAAGIM 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS--VHWNLTPVSGRVSDMVFLDDS 178 +AVK+ SIFD++A+ +A+ G S P+FW+ ++L+++ + +HW Sbjct: 120 SAVKQYSIFDYSAMFIAIAGVSAPVFWFSLLLLLVFAYGLHWV----------------- 162 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 P G+ EDG+F +M+LP I LG P A+I R+TRS MLEVL DYIR Sbjct: 163 -PGVGY---------EDGSF----RYMVLPIIALGLRPAAIIARLTRSCMLEVLSMDYIR 208 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL+ V++ HAL+NAM+PVVT++G ++ LL+GA+LTET+F+ PG+GR ++AL Sbjct: 209 TARAKGLSERAVVLKHALKNAMIPVVTIVGAEMSGLLSGAVLTETVFALPGVGRLAVEAL 268 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P+++G V+++A + ++ NLLVDL YG+ +PRIR++ Sbjct: 269 VARDFPMIRGTVIVIALIFLVANLLVDLSYGLFDPRIRYE 308 >UniRef50_A9B5L6 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Bacteria RepID=A9B5L6_HERA2 Length = 346 Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 164/348 (47%), Positives = 230/348 (66%), Gaps = 12/348 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I RRL +IP +GI+LL F + IPGDP +I+ GER +PE+ A L +L LD+ Sbjct: 1 MVGYIFRRLLGIIPVLLGISLLVFTLLRTIPGDPAIIILGERS-TPEQRAALRTKLKLDR 59 Query: 61 PMW----------QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFA 110 P++ QY+ YI GD G S+K+R + +E RF AT+EL + A++ A Sbjct: 60 PLFLNFEGGNIFESQYVTYITNFATGDFGDSIKTRQAISKELKQRFPATIELALSALLIA 119 Query: 111 TAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS 170 VG+ GV++A KRGS D +++ +AL G S+PIFW G+M+ L SV S R+ Sbjct: 120 VVVGVTTGVVSATKRGSWLDASSMIVALLGVSIPIFWLGLMMQYLFSVKLKWLDPSLRL- 178 Query: 171 DMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLE 230 D P+TG L+D + G ++A H+I+P++ L T+PLA I RMTRS+MLE Sbjct: 179 DTSLQGSFEPITGLYLLDGLLLGRFDITMNAFKHLIMPSLALATVPLASIARMTRSAMLE 238 Query: 231 VLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGL 290 VL +DYIRTARAKGL+ I+ H LRNA++PV+TVIGLQ+G LL GA+LTET+FSWPG+ Sbjct: 239 VLYQDYIRTARAKGLSARITILRHGLRNALIPVITVIGLQLGFLLGGAVLTETVFSWPGI 298 Query: 291 GRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 GRWL+D + RDYPVVQ GV+ V+ + +L+N LVD+ Y +PRI++K Sbjct: 299 GRWLLDGILARDYPVVQSGVMFVSLVFVLINTLVDISYRFFDPRIQYK 346 >UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VC58_9EURY Length = 313 Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 138/338 (40%), Positives = 218/338 (64%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++ RRL + IP IG+T++ + +++ PG+P I G P A+L ++GL++ Sbjct: 1 MLKYVTRRLLITIPVLIGVTIVISSIIYIAPGNPARIALGANA-RPAAVAELERQMGLNQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W +YL ++WGV+HG+LG S++++ V + R ATLEL + +M+ + +P+GV+ Sbjct: 60 PPWIRYLEWLWGVLHGNLGESIRTQRSVIQMIANRLPATLELALSSMVLTFIIALPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ ++ A+ SMP FW ++LI+L SV W+L P+SGR + Sbjct: 120 SAVKQYTWADNLSMLFAIFWISMPSFWLALILILLFSVQWSLFPISGRATP--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + T W + +ILPA+ GT ++ R+TRSSMLEVL EDYIRTA Sbjct: 171 ------VFTTAW---------LVSLILPAVATGTRRAGLLTRITRSSMLEVLNEDYIRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R KG+ VI HA++NAM+PV+T+IGLQ+ + G+++ ET+FSWPG+GR L++++ + Sbjct: 216 RGKGIGEKSVIYTHAMKNAMIPVITLIGLQIPAIFGGSVIIETVFSWPGMGRLLVNSVLQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL+ A +++ NLLVD+ YG +PRI ++ Sbjct: 276 RDYPVVQGLVLVYAIIVVASNLLVDVAYGYFDPRIEYE 313 >UniRef50_B8E2R5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Dictyoglomus RepID=B8E2R5_DICTD Length = 309 Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 147/338 (43%), Positives = 214/338 (63%), Gaps = 29/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I+RRL IP FIG+TL+TF + PGDP ++AG+R E A++ A GLDK Sbjct: 1 MLRYIIRRLLQAIPVFIGVTLITFILFFIAPGDPARLIAGQRA-DAETIARVRAMWGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ ++ D G S K+ IPV R QAT L A I A +G+ G++ Sbjct: 60 PLPVQYLLFLGRIVRLDFGRSFKTNIPVIVSIGERLQATAVLAFFAFIIAVFLGVTAGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ S+FD+TA+ +AL G S P++W G++L+++ + P+ G +S+ Sbjct: 120 SAVRQYSLFDYTAMVVALLGVSAPVYWVGIILLLIFGFNLGWLPLGGYISEY-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPAI LGT P A R++RSSMLEV+ ++YI TA Sbjct: 172 --------------------GIKAVILPAITLGTRPAAYFARLSRSSMLEVIRQEYITTA 211 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +VI HALRNA++PVVT G+ VG LL GA+LTETIF+WPG+GR ++ A+ Sbjct: 212 RAKGLPESKVIFKHALRNALIPVVTYAGMVVGDLLTGAVLTETIFAWPGIGRLVVQAILD 271 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QGGV+++A + IL NL+VDL Y +++PRIR++ Sbjct: 272 RDLPVLQGGVIVIALIYILANLIVDLSYALIDPRIRYE 309 >UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Agrobacterium vitis S4 RepID=B9K0U0_AGRVS Length = 359 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 156/363 (42%), Positives = 217/363 (59%), Gaps = 29/363 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RL + IP GI ++TFA +IPGDP M GE+ + E A + G DK Sbjct: 1 MLGYAAKRLLISIPVIFGILIVTFALARLIPGDPCKAMLGEKATA-ETCAGFITRYGFDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GD G S++ PV + + R T EL V A+I AT +G+ +GV+ Sbjct: 60 PLPTQFFIYMGDMLRGDFGTSVRFSRPVTQIIIERLPMTAELAVLALITATVIGVGLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPV----SGRVSDMVFLD 176 AA + S D + +A G SMP+FW G+ML L V TP SGR+S V Sbjct: 120 AARRHNSAADVGTMIVANAGISMPVFWLGLMLAYLFGVMLRGTPFWLPPSGRLSAGV--- 176 Query: 177 DSNPL---------------------TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTI 215 +S P + F +++ I G F DA+ HMILP + L TI Sbjct: 177 NSIPFYEVWHWQLAAESGWSKVLEFFSNFYILNALITGNWTVFWDAIRHMILPVMALSTI 236 Query: 216 PLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLL 275 P+AVI RMTRSS+L+VLG DY+RTARAKG+ RV+ HAL NA+LPVVT++GLQ+G LL Sbjct: 237 PMAVIARMTRSSLLDVLGRDYVRTARAKGVPEKRVVSEHALGNALLPVVTILGLQMGALL 296 Query: 276 AGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 +GA+LTET+F G+GR L++A+ RDYPVVQ +++A + +NLLVDL Y ++PRI Sbjct: 297 SGAVLTETVFGLSGVGRMLVEAIFARDYPVVQAFTVMIAVSYVAINLLVDLSYTYLDPRI 356 Query: 336 RHK 338 R + Sbjct: 357 RPQ 359 >UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Tax=Bacteria RepID=Q5SIN2_THET8 Length = 306 Score = 266 bits (680), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 153/338 (45%), Positives = 217/338 (64%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ + +PT +G+ LL F V + PGDP +++AGE +PE + GLD+ Sbjct: 1 MLTYLLRRILIAVPTLLGVVLLVFLMVRLAPGDPAILLAGEFA-TPETLEAIRTRYGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Q+ Y+ ++ GDLG S +SR PV EE F T+ L A++ A A GIP+G+L Sbjct: 60 PLPEQFALYLGALLQGDLGESARSRRPVLEELKTYFPNTVVLATAAILVALATGIPLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS D + LAL G SMP+FW+G++ I++ SV PV+G+ Sbjct: 120 AALRQGSWLDLGVMVLALLGVSMPVFWFGLLAILIFSVELGWFPVAGK------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +AH++LPA+ LG A++ RMTR +++EVL +DYIRTA Sbjct: 168 -------------------GTLAHLVLPAVTLGINATALLARMTRGTLVEVLSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVTV GL+ G+LLAGA++TETIF+WPGLG+ L+ ++ Sbjct: 209 RAKGLAERVVIFKHALRNALIPVVTVAGLEFGSLLAGAVITETIFAWPGLGQLLVGSILS 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VLLVA LVNL+VDLLY ++PR+R+ Sbjct: 269 RDYPVVQGAVLLVAFTFTLVNLMVDLLYAWIDPRVRYD 306 >UniRef50_Q0T6D1 Glutathione transport system permease protein gsiC n=145 Tax=Bacteria RepID=GSIC_SHIF8 Length = 306 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 144/342 (42%), Positives = 209/342 (61%), Gaps = 40/342 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLA----EL 56 ML ++++RL +IPT +++L F FVHM+PGDP ++AG PE AQ++ +L Sbjct: 1 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAG-----PEADAQVIELVRQQL 55 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLD+P++ Q+ HYI + GD G+SM SR PV +E RF TL L + +M++A G+ Sbjct: 56 GLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMA 115 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 G++AAV R D ++ +A++G S P F GM LI + SV P G Sbjct: 116 AGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVGA-------- 167 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 D+ H ILP++ LG AV+ R TR+S ++VL EDY Sbjct: 168 -----------------------DSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDY 204 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +RTARAKG++ V++ H LRNAM+PVVT++GLQ G LL G+I+ E +F+WPGLGR L+D Sbjct: 205 MRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVD 264 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +++ RDYPV+Q +LL + IL+NL+VD+LY +NP IR+K Sbjct: 265 SVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306 >UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NZV2_9BACE Length = 337 Score = 264 bits (675), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/339 (40%), Positives = 220/339 (64%), Gaps = 6/339 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I +RL IP + + ++ F ++PGDP GE + E+ QL E GL+ P Sbjct: 3 LKYIAKRLLYAIPAVVLVVIIIFLLTRVMPGDPARAYLGEMA-TEEQVEQLREEWGLNDP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q++ Y+ G++HGD G S ++ V +F+ R A+LEL + A+ A +G+P+G+ + Sbjct: 62 LPVQFVRYVSGILHGDFGYSNRTHDTVLNDFIKRIPASLELALWALAIAILIGVPLGIAS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIML--VSVHWNLTPVSGRVSDMVFLDDSN 179 A + S DH A ++ G +MP+FW+G+MLI++ ++HW + P +GR+S + ++ Sbjct: 122 ATHKNSPLDHGARIFSMLGATMPVFWFGLMLILIFYATLHWTVAP-TGRIS--MGINPPT 178 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TG ++D+ + G+ D++AH+ILPAI L +AV+ RMTR+SMLEVLG+DYIRT Sbjct: 179 TITGMYVLDSILTGDMVALKDSLAHIILPAITLSMSTMAVMARMTRASMLEVLGQDYIRT 238 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+ VI HALRNA++P++TV+G Q G +L ++ ETIFSWPG+G ++ DA+ Sbjct: 239 ARAKGMKERIVIYRHALRNALIPILTVLGGQFGMMLGYTVVVETIFSWPGIGFYVTDAIL 298 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY VQ L A + +++NL++D+LY VV+ R+++ Sbjct: 299 NVDYNPVQAFALFSALLYVVINLVLDILYTVVDRRVKYD 337 >UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, membrane) n=4 Tax=Alteromonadales RepID=Q3IF63_PSEHT Length = 344 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 136/340 (40%), Positives = 212/340 (62%), Gaps = 6/340 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +ILRR+GL + + +++ TF + PGD + ++G + +H QL + + Sbjct: 3 LDYILRRIGLFVFMVLMLSVFTFLLSFLFPGDALSNLSGIPSNNFAQHTQLEDKYLYNSN 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY+ ++ ++ GD G+S S V+ + + ATLEL + A+ + +G+P G+LA Sbjct: 63 YFMQYIAFLGRILQGDWGLSFASGDSVFSQILDLIPATLELSIYALFVSVVIGVPTGILA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 + D + GYSMPIFW ++LIML S+ P+SGR+S L + P Sbjct: 123 SAYYKQWPDKLISSTTMIGYSMPIFWLALLLIMLFSLQLGWFPMSGRMS---LLYEIPPT 179 Query: 182 TGFMLIDTAIWG---EDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 TGF+LID ++ + FIDA+ H+ LP IVL P V++R TR SML+V+ +++I+ Sbjct: 180 TGFILIDISLASFPYQGMAFIDALHHLTLPTIVLAMYPTTVLIRFTRESMLKVMDQNFIK 239 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL R ++II HALRNA+LPV+ IGLQ TL+ A++TE IFSWPG+GRWLID++ Sbjct: 240 TARAKGLNRRQLIIHHALRNALLPVIKQIGLQFSTLITLAMITEIIFSWPGIGRWLIDSI 299 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +RDYP +QGG++ V+ II ++ +L+Y + +P R++ Sbjct: 300 YQRDYPAIQGGLMAVSLFIIFATIIAELIYTLFDPLSRNQ 339 >UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=4 Tax=cellular organisms RepID=B1L5E7_KORCO Length = 337 Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/334 (44%), Positives = 216/334 (64%), Gaps = 3/334 (0%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I+RRL L+I GI ++TF H+IP DP+ + G + SPE ++ E G DKP+ Sbjct: 6 YIIRRLALMIFVLFGIIVITFVVSHVIPADPIGAILGPQA-SPELVEKIRREWGFDKPLH 64 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 +Q+ YI+ V+ GDLG S+K+ PV E+ + F AT+EL A+I A A+GIP+G+++AV Sbjct: 65 EQFFDYIYKVVRGDLGRSIKTNKPVMEDLLYFFPATIELATAAIIVAIAIGIPLGIISAV 124 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 K+ DH + AL G SMP+FW G++L+ ++ + P GR+ + + +TG Sbjct: 125 KKDKWPDHISRIFALMGVSMPVFWLGLILLFVLYYKLGIFPGPGRLDPGI--PEPPRITG 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + ID+ I G FI+A+ H+ LP+ VLG A I R+TR+++LEVL +D+I+ AR+K Sbjct: 183 LLTIDSLITGNFEAFINALWHLALPSFVLGYYASASIARITRTALLEVLTQDFIKAARSK 242 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL V+ HALRNA++P TVIG+ G+LL GAILTETIF+WPGLGR+ A D+ Sbjct: 243 GLAERIVLFRHALRNALIPTTTVIGMAYGSLLEGAILTETIFAWPGLGRYSTGAFLSVDF 302 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 V G LL+A + L NL+VD+LY ++PRIR+ Sbjct: 303 MAVMGSTLLIAIVYSLANLIVDILYAFLDPRIRY 336 >UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJF6_9RHOB Length = 326 Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 213/338 (63%), Gaps = 12/338 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L +P +GI ++TF + +IPGDP ++ G+ +PE A L LGLD Sbjct: 1 MTDYIIRRLLLFVPMALGIIVVTFGLLLLIPGDPAAVLLGQEA-TPENIASLRDALGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + + Y+ ++ GD+G+S+ PV + + R AT+EL + A++ +T VG+ +GV Sbjct: 60 PWFLRLGRYMLELLQGDMGVSIFQNAPVSDIILGRLGATVELALVALLMSTVVGVFLGVT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++G + D A+ LA G SMP++W ++L++ +V P GR P Sbjct: 120 AAIRQGGVVDAVAMLLAQIGISMPVYWLALLLMLGFAVQLGWLPAIGR---------GEP 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L + A+ G D++AH+ LPA+ L A+I R+ R+SMLEVL ED++RTA Sbjct: 171 LVSAL--GMALRGNPAPLWDSLAHIALPALSLALNSAAIISRLVRTSMLEVLREDFVRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG+ R V+ HALRNA+LPVV+VIGL+ G LL GAILTETIF+WPGLG+ I A+ + Sbjct: 229 KAKGMRRRSVVWRHALRNALLPVVSVIGLRFGALLGGAILTETIFAWPGLGQLTISAISQ 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG VL A + V LLVDLLY V+PRIR + Sbjct: 289 RDIPLIQGIVLTFALIYASVTLLVDLLYAAVDPRIRLR 326 >UniRef50_A6TPC4 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Bacteria RepID=A6TPC4_ALKMQ Length = 315 Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 206/338 (60%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++ LRRL ++P IG+T + F+ ++ PGD + G+ + E+ + ++GL+ Sbjct: 1 MVKYTLRRLAYLLPVLIGVTFVVFSIMYFTPGDAAAMRLGQEA-TQEQIDSMRDQMGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY YI + GD G S +S PV E + RF T L V M A +G+ +GV+ Sbjct: 60 PFHIQYGRYIINAVQGDFGRSWRSNSPVISEILARFPNTFVLSVAGMSIAILIGVSLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ SI D+ + AL G S+P FW+GM+ I+L SV WN N Sbjct: 120 SAVKQYSISDNIGMFFALFGVSVPNFWFGMLTILLFSVFWN-----------------NQ 162 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GF L ++ F + ++LPA+ LGT A+I RMTRS+MLEVL +DYIR Sbjct: 163 F-GFSLFPSS------GFDAGLRSLVLPALTLGTSSAAIITRMTRSAMLEVLSQDYIRFT 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL ++I HAL NA++P++TV GLQ G LL GA+ TET+FS+PG+GR ++++++ Sbjct: 216 RAKGLGERKIITRHALSNALIPIITVTGLQFGVLLGGAVFTETVFSFPGIGRLIVESIRA 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P+VQG V+ +A + LVNL VDL+Y +V+PRI+ + Sbjct: 276 RDLPMVQGSVIFLAFVFSLVNLGVDLIYALVDPRIKAQ 313 >UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ98_9RHOB Length = 335 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 212/338 (62%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML FILRR+ L+IP IG+T++ FA ++PGDPV + AG E A L E GLD+ Sbjct: 1 MLYFILRRILLLIPVVIGLTVIMFAIARLLPGDPVSLAAGPNATQSEIDA-LAREFGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY Y+ G++HGDLG S+ +R PV + ATLEL + AM+ A +GIP+G+ Sbjct: 60 PIWTQYFDYLSGLLHGDLGTSLLTRRPVAADIAAYLPATLELVIAAMLIAVCIGIPLGLA 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV R D+ + +A+ SMP F+ G++L + ++ P+ GR+ +V + Sbjct: 120 TAVWRNRWPDYLSQVVAIGAISMPRFFLGLLLQLCFAMWLMWLPLGGRLPIIVIPPPT-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF+ ID+ + G+ F+ A+ H+ +PAI + PLA I+RM R+S +EV+ +DY+ TA Sbjct: 178 VTGFLTIDSLLAGDMHTFVTALRHLAMPAIAMSLSPLATIMRMMRASTIEVMSQDYVTTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL R ++I+ + RNA+ +TVIGL G LL G +L ET+F WPGLG + A+ Sbjct: 238 RALGLPRAKIILKYIARNAVSATLTVIGLYFGWLLGGTVLVETVFDWPGLGLYATKAIIS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D V G L++ M + NL++DLLYGV+NP++R+ Sbjct: 298 QDMMPVIGVALVIGLMFVAANLVIDLLYGVINPKVRYS 335 >UniRef50_C9M8R7 Glutathione ABC transporter, permease protein GsiC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8R7_9BACT Length = 307 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 138/339 (40%), Positives = 204/339 (60%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I+RR+ L+IP + + + F ++ PGDP I GE ++P+ A AE GLDK Sbjct: 1 MVKYIVRRILLLIPIVLSVMFILFTILYFTPGDPARIALGEE-VTPDAIAAFRAEHGLDK 59 Query: 61 PMWQQYLHYIW-GVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + Q+ +Y++ V GDLG S + PV E R T++L A++F+T VGIP+G+ Sbjct: 60 PFFVQFGNYVYRAVFKGDLGYSYAMQSPVSMEIGHRVPVTMKLAFWAVVFSTVVGIPLGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A+++ SI D + L G SMP FW G+++I+ SVH P G Sbjct: 120 ICAIRQYSILDSITTLITLLGVSMPTFWTGLLMILAFSVHLGWFPSMG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+V+ M+LP L LA+I RMTRSSMLEV+ DY+RT Sbjct: 168 -------------------FDSVSAMVLPVFTLSGSSLALIARMTRSSMLEVIRSDYVRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG T +VI HAL NA++P++T++ +Q GTLL G+I+TE +FS G+GR +I+A++ Sbjct: 209 ARAKGQTERKVIYRHALPNALIPIMTIVSMQFGTLLGGSIVTEAVFSISGIGRLMIEAIK 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QGGVL ++ L+NL VD++Y V+PRI K Sbjct: 269 MRDYPIIQGGVLFISIAFCLINLFVDVMYAFVDPRIHVK 307 >UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepID=A6TS90_ALKMQ Length = 309 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 151/339 (44%), Positives = 209/339 (61%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL +IP +G++L+ F ++ PGDP IM GE E A++ LGLD Sbjct: 1 MHKYILRRLLYLIPVILGVSLIVFTMMYFTPGDPARIMLGESA-PDEEVARMRESLGLDD 59 Query: 61 PMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P Q+ Y+ V+H D+G S ++ PV EE + RF ATL+L + A +GIP+G+ Sbjct: 60 PYVVQFGRYVKNAVVHQDIGRSYRTGRPVAEEVLTRFPATLKLAAAGVFVAVVIGIPIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A K+ S+FD+ A+ AL G SMP FW GMM I++ SV+ P SG Sbjct: 120 ISATKQYSLFDNVAMIFALMGVSMPNFWQGMMGILIFSVYLGWFPSSG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H+ILPA +GT A+I RMTRSSMLEV+ +DYIRT Sbjct: 168 -------------------FSTFRHLILPATTIGTSSAAIITRMTRSSMLEVVRQDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG VI HAL+NA++P++TVIGLQ G LL GA+LTE+IFS PG+G+ ++D++ Sbjct: 209 ARAKGQAESVVINQHALKNALIPIITVIGLQFGYLLGGAVLTESIFSIPGVGKLMVDSIL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PVVQGGVL +A +VNL+VD+LY V+PRI+ + Sbjct: 269 TRDFPVVQGGVLFIAVTFSMVNLVVDILYAYVDPRIKSQ 307 >UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCD1_9FIRM Length = 306 Score = 256 bits (655), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 138/337 (40%), Positives = 208/337 (61%), Gaps = 32/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + ++R+ VIP + I+ + F + ++PGDPV M G S E A AELGLDK Sbjct: 1 MLGYTIKRILQVIPVLLIISFICFMMIRLVPGDPVANMLGVNA-SKEAIAAQRAELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S+ +R PV +E R+ ATL+L + A +FA VGI GVL Sbjct: 60 PLLTQYGDFLVKALQGDLGKSITTRRPVIDEIAQRYPATLKLALGATVFAAVVGITFGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ + +L S P F+ +++++L S+H P G P Sbjct: 120 SAVKQNKLTDNVIMVFSLLSVSTPSFFLALVMMLLFSIHLGWLPSMGL---------RTP 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L H +LP I LG + +I R TRSSMLEVL +DYIRT+ Sbjct: 171 L----------------------HYVLPIITLGMQSVGLIARTTRSSMLEVLRQDYIRTS 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+++ +++ HA +NA++PVVTV+GL+ G LLAG++L E +FS PG+GR+++D + + Sbjct: 209 RSRGISQAVIVMRHAFKNALIPVVTVVGLRFGGLLAGSMLVEAVFSVPGIGRFMVDGVLK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPVVQG VL++AT +LVNL VDL+Y +++PRI++ Sbjct: 269 RDYPVVQGTVLVLATTFVLVNLAVDLIYALIDPRIKY 305 >UniRef50_B9JNQ5 Dipeptide ABC transporter n=8 Tax=Rhizobiales RepID=B9JNQ5_AGRRK Length = 365 Score = 256 bits (654), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 133/309 (43%), Positives = 199/309 (64%), Gaps = 2/309 (0%) Query: 28 HMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIP 87 ++P DPV+ + G +S + ++ ELGL +P+W Q+L Y+ + GDLG S + P Sbjct: 59 RLLPADPVLAITGSE-VSKAVYDRVYNELGLGQPIWMQFLTYVGKIATGDLGTSATTGQP 117 Query: 88 VWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFW 147 + + + F AT+EL + AMI VG+P+G+ AAV+RG+I DH A +AL G+S+PIFW Sbjct: 118 ILTDLLSIFPATIELAIIAMIIGIVVGVPLGITAAVRRGTILDHIARIVALAGHSIPIFW 177 Query: 148 WGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMIL 207 G+M + + L SGRV D+++ P+TGF+LID+A+ G+ F A+ H+IL Sbjct: 178 MGLMALFVFYAKLQLVGASGRV-DVLYEGLVTPVTGFLLIDSAMEGQWDVFQSALNHIIL 236 Query: 208 PAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVI 267 P +LG +A I RM+RS MLE LG++YI TARAKGL R +V+ HA RN + ++T++ Sbjct: 237 PGAILGYYSVAYICRMSRSFMLEQLGQEYIVTARAKGLGRRKVVWRHAFRNIRVQLLTIM 296 Query: 268 GLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLL 327 L G LL GA+L ET+F WPGLG++L LQ D VV G VL + + + +N++ D+L Sbjct: 297 ALTFGGLLEGAVLIETVFGWPGLGQYLTRGLQMNDMNVVMGAVLTIGAVFLTINIISDVL 356 Query: 328 YGVVNPRIR 336 Y +++PR R Sbjct: 357 YRILDPRTR 365 >UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5Y8_GEMAT Length = 306 Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 202/337 (59%), Gaps = 32/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+LRR L IPT G+ ++ F +++ PGDPV M GER + +L AEL LD Sbjct: 1 MTFFLLRRALLSIPTLFGVLVVVFLLLYVAPGDPVQAMVGERADAATIE-RLRAELRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ HY G++ GDLG S + P+ + RF TL+L AM+ AT +G+ +G L Sbjct: 60 PLPSQFAHYASGILTGDLGRSYITNRPIVTDIAERFPRTLQLAGAAMLLATLLGVSIGAL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+ FD A+ G S P++W G++LI+ +V P SG Sbjct: 120 AAVRPHGWFDRVALATTYLGISFPVYWIGLLLILFFAVTLRWFPASG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +G + ++LPA+ LG+ +A + R+TRSSMLEVLG D++RTA Sbjct: 167 -----------YGR-------LEFLVLPALALGSRSIAYLARVTRSSMLEVLGADFVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V++ HALRNA++PVVTVIGL G L G+ILTETIFSWPG+GR+++ A+ R Sbjct: 209 RAKGLAERTVVVRHALRNALMPVVTVIGLDFGAYLTGSILTETIFSWPGIGRYVVMAISR 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RD P VQG VL ++ + +LVNLL DL YG ++PR R Sbjct: 269 RDLPAVQGTVLFLSVVFVLVNLLTDLAYGRIDPRARR 305 >UniRef50_UPI00019735EB peptide ABC transporter permease protein y4tP n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735EB Length = 328 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 138/339 (40%), Positives = 204/339 (60%), Gaps = 26/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + IL+RL +IP + + +TF F MIPGDPV+ + G++ +PE +L AE+G+DK Sbjct: 11 MAKMILKRLIQIIPILLIVLTITFIFTRMIPGDPVLTVLGDQA-TPEMVEKLRAEMGMDK 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY+ YI ++HGD G S PV E R TL++ + +M A +G+ VG+L Sbjct: 70 SIPEQYVMYILDILHGDFGTSFAYGRPVLELIAERLPNTLQISLTSMAIAVVIGLSVGIL 129 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ S++D+ A +AL G SMP FW +ML++L SV+ + P G Sbjct: 130 SAVKQYSVWDYLATVIALVGVSMPRFWLALMLVLLFSVNLGILPAFGM------------ 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G F D V HMI+P I L P A R+TRSSMLEV+ D I+ Sbjct: 178 ------------GTSG-FGDTVLHMIMPCICLTVAPAATFTRITRSSMLEVINNDSIKAL 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+G++ ++ HAL+NA+ P+VTV GLQ+ T GAILTETIFSWPG+G ++ A+ Sbjct: 225 RARGMSEKAILWKHALKNALPPIVTVFGLQLATAFTGAILTETIFSWPGMGSLIVGAIDN 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY ++QG V+LVA + +NL+ D++Y ++NP+ + Sbjct: 285 RDYSLIQGAVVLVAFAFVFINLITDIIYMIINPKFAAES 323 >UniRef50_D2LLS4 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Euryarchaeota RepID=D2LLS4_9EURY Length = 335 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 208/334 (62%), Gaps = 6/334 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 Q+I+RRL L+ P IG+TL+TF +IP DP AG++ P ++ E L+ P+ Sbjct: 5 QYIVRRLLLLFPVIIGVTLITFTISFVIPADPARAWAGQKA-PPSVVEKIRIEYHLNDPI 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 + QY +YI GV G+ G S + PV + F AT EL + AM A GI +GV++A Sbjct: 64 YVQYYYYITGVFTGNWGYSHSEKRPVAQCLANYFPATFELTLWAMAIAIPTGIYLGVVSA 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 VKR I DH + AL+G SMPIFW G++LI+L + P SGR + + T Sbjct: 124 VKRNKIPDHLSRVFALSGVSMPIFWLGLLLILLFYTYLGWLPASGRG-----IPPRHIYT 178 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G ++D+ + + F+ + H+ILP+I L LAVI RMTRSSMLEVL DYI+TA+A Sbjct: 179 GLWILDSILSLDWHAFVVDLRHIILPSITLSYATLAVITRMTRSSMLEVLRLDYIKTAKA 238 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL+ VI HALRNA++P +TV GL LL GA+LTETIF+WPG+GR+ A+ D Sbjct: 239 KGLSNKVVIYRHALRNALIPTLTVSGLAFAGLLGGAVLTETIFAWPGMGRYAYQAISTLD 298 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 YP + G LL+A + ++ NL+VD++Y ++PRI+ Sbjct: 299 YPAIMGVTLLMAIIFVIGNLIVDIMYAYLDPRIK 332 >UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Bacteria RepID=Q5WKK0_BACSK Length = 321 Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 204/335 (60%), Gaps = 24/335 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+ +RL +IPT ++L+ F ++PGDP +M G + S E L ELGLD+ Sbjct: 1 MIHFVGKRLLDLIPTLFVVSLVIFIITRLLPGDPASVMLGPQA-SVEDVEALRGELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QQ LHY ++ D G S PV + RF TL L V A+ A VG+P G++ Sbjct: 60 PFFQQLLHYFKDLLQLDFGTSAYYNEPVLSLIMDRFPNTLLLAVSALAIALLVGVPAGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KR S+ D+ +L G SMP+FW G+M ++ SV P +G S Sbjct: 120 AAAKRNSVIDYLVTFGSLVGVSMPVFWLGVMFVLFFSVQLGWLPATGMGS---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D +W D +++LP++ L TIP+A R+TRSSMLEV +DYI+TA Sbjct: 170 ------LDNGLW-------DFFKYLLLPSVTLATIPMAEFARITRSSMLEVGAQDYIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HA +NA+ P++TV G+QV LL GA+LTETI++WPG+GR ++DA+ + Sbjct: 217 RAKGLKEFWVISKHAFKNALTPLLTVTGMQVSMLLGGAVLTETIYAWPGMGRMIVDAIDK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD+ VVQG VL +A + +LVNL+VDLLY VVNPR+ Sbjct: 277 RDFIVVQGSVLFIALIFVLVNLVVDLLYKVVNPRV 311 >UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT family n=4 Tax=Proteobacteria RepID=Q0K3A7_RALEH Length = 318 Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 214/341 (62%), Gaps = 26/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQ--LLAELGL 58 M ++LRRL +IPT + +L+ F V M+PGD V +M + IS + + L+ LG+ Sbjct: 1 MSAYVLRRLLALIPTLLFASLIVFTIVRMVPGDVVDLMLSQNDISADTRTREDLVRALGM 60 Query: 59 DKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 D+PMWQQY+H++ G V+ GDLG S+ PV R AT LGV A++ A +V +P+ Sbjct: 61 DRPMWQQYVHWVGGIVLRGDLGQSLWQGEPVLSMVTARIPATFSLGVIALVVALSVALPI 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GVL+A+++ S D+ A ++ ++P FW G M+++ SV W +P + V F +D Sbjct: 121 GVLSAIRQDSAADYIARSFSILMLAIPSFWLGTMVMVFPSVWWGWSPEARYVP---FHED 177 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + V +M++PAIVLG A+ +RMTR+ MLEVL +DYI Sbjct: 178 P--------------------VQHVRNMLIPAIVLGMALSAITMRMTRTMMLEVLRQDYI 217 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTA AKGL+ V++ HALRNA++PVVT+IGLQ L+ GA++ E IF+ PG+G L+DA Sbjct: 218 RTAWAKGLSERLVVLRHALRNALIPVVTLIGLQAPLLIGGAVIIEQIFALPGMGLLLLDA 277 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +RDYPV+ G L+V ++L+NLLVDL YG+ +P++RH+ Sbjct: 278 VHQRDYPVITGVFLVVGVAVMLINLLVDLSYGLFDPKVRHR 318 >UniRef50_Q28JR5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=Q28JR5_JANSC Length = 324 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 137/336 (40%), Positives = 207/336 (61%), Gaps = 13/336 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F++RRL I IG+TL++F + I GDP + E + E A +A LG D+ Sbjct: 1 MWTFLVRRLLQSIIVMIGVTLISFISLQ-IGGDPTYLFVSENATTEEIEAARIA-LGFDR 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL YIWG + GD G S+ R P + + AT+EL +++ A + +P+G+ Sbjct: 59 PLHIQYLSYIWGALQGDFGNSLSYRQPAMDIVLQAMPATIELTFFSLVIAIGLSVPLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ RG D + +A+ G S+P FW G+M+ + ++ P+SG + FL+ Sbjct: 119 AALHRGKPIDGGIMTIAMLGQSIPNFWMGIMMFLFFGLYLGWFPISG---NEPFLEP--- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L + N + HM+LPA+ +GT LA R+ RSSMLEVL +DY+RTA Sbjct: 173 -----LFEGEFSEAFTNLPSTIHHMVLPAVAVGTYTLARNARLVRSSMLEVLQQDYVRTA 227 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ RV+I HA+RNA LPVVT+IGL+ G LL G ++ ET+FS+PG+GR + +A+ + Sbjct: 228 RSKGISERRVVINHAMRNAWLPVVTMIGLEFGFLLGGVVVVETVFSYPGIGRLVFNAINQ 287 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD PVVQ V+L+A + IL+NL+VDL+Y ++PR++ Sbjct: 288 RDIPVVQASVILLAAIFILLNLIVDLIYARLDPRVK 323 >UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=25 Tax=Actinomycetales RepID=C7MR18_SACVD Length = 341 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/341 (40%), Positives = 217/341 (63%), Gaps = 6/341 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ RR+ ++ +++L FA++ +PG PV + G+RG + E AQL ELGLD+ Sbjct: 1 MLRYAFRRVLQLVLVLFVLSVLLFAWLRALPGGPVSALLGDRG-TAESRAQLREELGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLG--ISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P++ QY ++ + G+ G I + +P E F RF AT+EL A++ A IP+G Sbjct: 60 PIFVQYFSFLGRALTGNFGNSIGVAPGMPALEVFSERFPATIELSFMAIVLALITAIPLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LAA +RG D+ + +L G S+PIF++ +L + ++ P GR + + D+ Sbjct: 120 YLAARRRGGWLDNAGILSSLVGISVPIFFFAFLLKWIFAIELGWLPTGGRQTVGI---DA 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +TGF ++D + E DA+ H++LP+I L +IP AVI R+TR+S+L+VL EDY+R Sbjct: 177 TRVTGFFVLDGILTQEWDAAWDALVHLLLPSIALASIPFAVIFRITRASVLDVLDEDYVR 236 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR+KGL + + H LRN++LPVVT +GLQ G+LL+GA+LTET+F+W G+G L Sbjct: 237 TARSKGLAKRVIRDRHILRNSLLPVVTTVGLQTGSLLSGAVLTETVFAWHGIGEALALGF 296 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +R+D+PV+Q ++ A +L+NLLVDL Y +++PRIR + Sbjct: 297 ERKDFPVLQVVIIAGAASYVLINLLVDLSYALIDPRIRTAQ 337 >UniRef50_D1C9E9 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9E9_SPHTD Length = 336 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 141/320 (44%), Positives = 210/320 (65%), Gaps = 4/320 (1%) Query: 17 IGITLLTFAFVHMIPGDPV-MIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMH 75 + I + F F+ +PGDPV +IM E +S E+ L A+ LD+P+ Q Y+ GV+ Sbjct: 18 LAIAVFVFFFMRYLPGDPVDLIMGQEGNVSQEQIDLLKAQYRLDQPLHVQLSSYLSGVLQ 77 Query: 76 GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVG 135 GDLG S+ R PV + RF AT+EL + A++FA AV +P+G L+A R S D ++ Sbjct: 78 GDLGTSIVQRKPVTGLIMDRFPATIELALGALLFALAVALPIGTLSAYWRNSPVDRLSMA 137 Query: 136 LALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGED 195 A G SMP FW G++LIML +VH PV GR + + L+ + +TG ++D+ + + Sbjct: 138 GAFVGISMPGFWLGIVLIMLFAVHLKWLPVGGRAT--IGLEPEH-VTGLYVLDSILTRDG 194 Query: 196 GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHA 255 +D++ H++LP++ LG + A++ R+ RSSMLE L +DY+R ARAKGL + V+ HA Sbjct: 195 KALVDSLKHLVLPSVTLGAVMAALLARVVRSSMLEALSQDYVRLARAKGLHELVVVGKHA 254 Query: 256 LRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVAT 315 LRNA++P VT++GL+VGTLL G ++ ET+FSWPG+GR ++DA+ RDYP+VQG V++ A Sbjct: 255 LRNALIPTVTILGLEVGTLLGGNMIVETVFSWPGIGRLVVDAIFARDYPLVQGVVIIYAC 314 Query: 316 MIILVNLLVDLLYGVVNPRI 335 L NL VD+ Y +NP+I Sbjct: 315 TFALANLAVDIAYTYLNPKI 334 >UniRef50_Q47XM7 Peptide ABC transporter, permease protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XM7_COLP3 Length = 342 Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/339 (39%), Positives = 209/339 (61%), Gaps = 6/339 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL L I T + +TLL+F+ + PGD V+ +G+ S A L +DK Sbjct: 1 MLTFTLRRLSLFIFTMLVLTLLSFSLSFLFPGDTVINHSGQINASATELAHLNQVYQMDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 ++ QY Y+ +++GD G SM S+ P+ E + AT+EL + A++ A VGIP+G + Sbjct: 61 SIFNQYGAYLTHILNGDFGQSMASQSPISNEIIKLLPATIELSLVALLIAMLVGIPLGFI 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K D+ + LA+ GYS+P+FW G++ I++ S+ P +G++S L + Sbjct: 121 AAIKHNKTSDNVILSLAMLGYSIPVFWLGLLAILVFSIGLGWLPSAGQIS---LLFEIEF 177 Query: 181 LTGFMLIDTAIWGEDGN---FIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +TG D + F DA AHMILPA V+ P + +R++R+SM+EVL YI Sbjct: 178 VTGIQFFDILLSDSPYKWQAFRDASAHMILPACVIALAPATIFIRLSRASMIEVLAASYI 237 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 R ARAKGL+ ++I HA+RNA++ ++ +GLQ L+ A++TE IFSWPG+GRWLID+ Sbjct: 238 RAARAKGLSFQQIIFRHAIRNALIQIIRHVGLQFANLVTIAMVTEVIFSWPGIGRWLIDS 297 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + +RDY +Q G+L+++ I +V++L D +Y +NP R Sbjct: 298 IYQRDYTAIQSGLLVLSCFIFIVHILTDFIYAALNPLAR 336 >UniRef50_Q1ARP2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARP2_RUBXD Length = 334 Score = 250 bits (639), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 208/334 (62%), Gaps = 4/334 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQ 64 +LRRL ++ T + + + F + ++PGD ++A + P++ AQ+ ELGLD+P+W+ Sbjct: 5 VLRRLAILPVTALLVATVVFFVLRVVPGDASDVLASQ-ATDPDQRAQITQELGLDEPLWR 63 Query: 65 QYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVK 124 QYL ++ G+ DLGIS S PV E T+EL V +++ VG+ G++AA Sbjct: 64 QYLLFLSGMARLDLGISFYSGQPVVELLFETVPVTIELAVASVLVMVGVGVSTGMIAAAF 123 Query: 125 RGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGF 184 R + D A +A+ +SMP FW G++LI++ V+ P GR+ V D P T F Sbjct: 124 RNTWLDAAARFVAVVLFSMPWFWLGILLIVVFGVYLGWLPTFGRLPATVTYD---PTTNF 180 Query: 185 MLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKG 244 +L+D I G + + H+ILPA+ +G + ++TR+S +E + ED++RTAR KG Sbjct: 181 ILVDALIQGRPDLILPWLQHLILPAVTVGLTTAGFVTQITRTSFIETMFEDFVRTARMKG 240 Query: 245 LTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYP 304 ++ RV H RNA LP+VT++GLQ G LL GA+++E +FS+PG+GR +++A+ +RDYP Sbjct: 241 MSEFRVFWGHIFRNAALPIVTIVGLQFGALLGGAVVSEAVFSYPGVGRMMVNAIFQRDYP 300 Query: 305 VVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VVQG L++A++ ILVN L D+ Y ++PR+R Sbjct: 301 VVQGAALVIASLYILVNTLTDISYLYLDPRLRRS 334 >UniRef50_A6X362 Binding-protein-dependent transport systems inner membrane component n=17 Tax=Proteobacteria RepID=A6X362_OCHA4 Length = 315 Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 139/337 (41%), Positives = 202/337 (59%), Gaps = 22/337 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+RL V+P +G++++ F + MIPGD + G +PE ++ +LGLDK Sbjct: 1 MPAYILKRLVAVVPVLLGLSIIVFLVMAMIPGDTATALLGSYA-TPENVERINRDLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY ++ ++HGD G S PV +E + RFQATL L A++ + G+ G++ Sbjct: 60 PLLQQYFIWMGNLLHGDFGRSFVLNRPVLDEVMERFQATLVLAGVALVLCSVFGLLAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ D T + L G S+P FW G++LI L +VHW + P SG Sbjct: 120 SAVRQFGWADRTITFIVLAGISIPSFWLGLLLIYLFAVHWRILPASGM------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 A++G G+ D + H+ILPA L + VI R+TR +MLEVL +DYIRTA Sbjct: 168 --------YAVYG-GGDLKDLLWHLILPATTLAVVAAGVIARLTRGAMLEVLRQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RVI HA R A++ V+ VIG+Q G +L GA+ ET+F WPG+G L+ A+ Sbjct: 219 RAKGLNERRVIYGHAFRAALVSVIPVIGIQAGFVLGGAVYIETVFQWPGIGAMLVKAIST 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RD +VQGGVL+VA +L NLL D++ +++PRIR Sbjct: 279 RDILLVQGGVLVVAASYVLFNLLADVIQTMLDPRIRS 315 >UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipeptide) n=35 Tax=Bacteria RepID=Q7CVP2_AGRT5 Length = 315 Score = 249 bits (637), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 209/333 (62%), Gaps = 24/333 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I +RL + IPT + I++ F+ ++PGDPV+ MAGE P L + L+ P+ Sbjct: 4 YIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVLAMAGEER-DPATIEFLREKYRLNDPVP 62 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QYL+++ GV+ GD GIS+++ PV E + T++L V AM FA +GIP+G+LAAV Sbjct: 63 LQYLNWLGGVVTGDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIGILAAV 122 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 K+ + D+TA +AL+G S+P FW G+MLI+LVSV P SG S +F+D Sbjct: 123 KKNTWIDYTANIVALSGLSIPNFWLGIMLILLVSVKLGWLPASGYES--IFVDP------ 174 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + ++ MI+PA VLG A ++R TRS+M+ VL DYIRTARAK Sbjct: 175 ---------------VRSIETMIMPAFVLGNALAATLMRHTRSAMVAVLSSDYIRTARAK 219 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+ +I+ H+ RNA+LPV+T++ L G LLAGA+LTE IF+ PG G+ +DA+ RDY Sbjct: 220 GLSPREIILSHSFRNALLPVITLLALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFTRDY 279 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 VVQG VL A IL+NLL D+ Y ++NPR+R Sbjct: 280 AVVQGIVLCTAVGFILMNLLADIAYVLLNPRLR 312 >UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepID=A4IPU6_GEOTN Length = 316 Score = 249 bits (637), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 209/339 (61%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+ R+ +IP + + ++ F +H+ PGDP +M G + +PE QL +LGL+ Sbjct: 1 MKAYIVTRILSLIPVLLVVAIVAFFLIHLTPGDPAAVMLGSQA-TPEEVEQLREQLGLNL 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++Q+ ++ +G++ GD G S+ PV F+ TL L V A + + IP+G+ Sbjct: 60 PLYEQFANWFFGLLQGDFGWSIYYNKPVLTVFLEHLGPTLSLAVLAQAISMVLAIPMGIS 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG+ D + L + G ++P F G+ L+ L ++ L PV+G P Sbjct: 120 AARKRGTKIDQIFMALVMLGMAIPSFLMGLFLMQLFALKLKLFPVAGY----------EP 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L+ + +W + + MILPA LG I A+I RMTRSSML+VL ++I+TA Sbjct: 170 LS------SGLW-------NHLKFMILPATALGIIQTAIIARMTRSSMLDVLSANFIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG+ ++ HALRNA +P++TV+G + GTL+AGA++TET+F+ PG+G+ +I A+++ Sbjct: 217 YAKGVKEKVIVYKHALRNAAIPILTVLGQEFGTLIAGAVVTETVFNLPGIGQLVIHAIEK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+QG +LL A +LVNL+VDLLYG+V+PR+R + Sbjct: 277 RDYAVIQGTILLAALSYLLVNLIVDLLYGIVDPRVRFGR 315 >UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacteria RepID=B9KZQ4_THERP Length = 315 Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 137/339 (40%), Positives = 206/339 (60%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L IP + + TF +HM PGDPV ++ G + E+ A+L ELGL+ Sbjct: 1 MTAYIVRRLLLAIPVMLLVATATFLLLHMTPGDPVAVLLGPDATT-EQIAELRRELGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY ++ G + GDLG S+ PV R T +L + A + A +G+ +G+L Sbjct: 60 PIYIQYGRWLAGAVRGDLGQSIFLNKPVTIAIFERLAPTAQLSILASLVAIVIGLSLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+ G+ D A+ +A+ G SMP FW G+ LI + +V + L P G Sbjct: 120 SAVRHGTALDLGAMLIAMIGISMPTFWLGLNLIFIFAVSFRLLPPQG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + +W D ++ MILPAI LG A + R+TRS +LE L EDY+RTA Sbjct: 167 ---YQPLHEGLW-------DNLSRMILPAITLGAGQGAFLARITRSVVLETLREDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ RV++ H LRN ++P+ TVIGL L+ GA++TE +F+ PG+GR LI A+ R Sbjct: 217 RAKGLSERRVLVGHVLRNGLIPITTVIGLTFAILMGGAVVTEQVFNIPGIGRLLIQAVLR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD+P++QG VL +A + +L+NLL+D+LY ++PRIR+ + Sbjct: 277 RDFPLIQGIVLFIAFVYVLINLLIDILYAFLDPRIRYAE 315 >UniRef50_D2ASJ6 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Actinobacteria (class) RepID=D2ASJ6_STRRD Length = 364 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 211/337 (62%), Gaps = 3/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLD 59 +++F+ RR+ + +GITL+TF +++PGDPV G+R + P AQ AE GLD Sbjct: 28 LIRFLARRVLTALLLAVGITLVTFVLTNLVPGDPVSANLGQRALGDPAIVAQWRAEHGLD 87 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 KP+ QQYL ++ GV+ GDLG S +S PV ++ ATLEL A++ + G+ GV Sbjct: 88 KPLPQQYLMHLQGVVQGDLGTSQQSHRPVMDDLAESVPATLELAGAAILISLVAGVAFGV 147 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA++R + DH L+L G S+P FW +M + +TP SGR+ + Sbjct: 148 VAALRRDRLSDHLLRVLSLVGISVPTFWLALMAFYVFFYRLQVTPGSGRIDPT--MSPPP 205 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TG ID+A+ G+ F AV H+I PA+VL + ++ R TRS++LEVLG+DY+R Sbjct: 206 QVTGLYTIDSALAGQWDVFASAVGHLITPALVLALYTIGLLTRFTRSAVLEVLGQDYVRA 265 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL ++ + LR+A++P++TV GL G+LL+G +L E IF+WPG+G++ + Sbjct: 266 ARAKGLPGRVILFRYVLRSALVPIITVAGLAFGSLLSGTVLVEAIFAWPGVGQYAYKSAT 325 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P V G L+V + +++NL+VD+LYGV++PR+R Sbjct: 326 TLDLPAVMGVGLVVGGVYLVINLIVDVLYGVIDPRVR 362 >UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67T79_SYMTH Length = 306 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 136/336 (40%), Positives = 203/336 (60%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RRL IP +G++L+TF +H++PGDPV + A E+ P ++ E+GLD+ Sbjct: 1 MLAYIVRRLWSGIPVLLGVSLITFILMHVVPGDPVTV-AFEKKADPATIERIRREMGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S +++ PV ATL+L A++ + +G+P+G+L Sbjct: 60 PLPVQYADFLLRALRGDLGRSFQTQQPVMNMIRSAMPATLKLTASAVLVSVVIGVPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ RG+ D+ A AL+ S P+FW M+ +L P+SG Sbjct: 120 SALNRGTAIDYMATVTALSFISAPVFWVAMVAQLLFGYRLGWLPISG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+ILPA+VLGT A I R TRSSML+V+ +DYIRTA Sbjct: 167 ------------------FDTLKHLILPALVLGTRYAASIARYTRSSMLDVVSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ HAL+NA++PV+TV+GL++G LL G+ILTE++F PGLG I L Sbjct: 209 RAKGLSGRVVVFKHALKNALIPVITVVGLEIGGLLTGSILTESVFGIPGLGLVTIRGLNA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+PV+Q VLL A + +++N+LVD+ Y +V+PRIR Sbjct: 269 LDFPVIQATVLLTAVIFVVMNILVDISYSLVDPRIR 304 >UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VQ3_BRAJA Length = 315 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 134/338 (39%), Positives = 211/338 (62%), Gaps = 26/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M +++RRL L++ T GI+++ F + ++PG+ V I+ G + P A L ELG+D Sbjct: 1 MFAYLVRRLFLMLVTLFGISVVIFFLLRIVPGNIVDILFAAAGYVDPADKANLEKELGID 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY H+I G + GD G S S P +E +PR T L A++F+ ++GIP+GV Sbjct: 61 QPLVVQYWHWISGFLRGDFGYSYVSEKPALQEILPRIPITARLAGLALLFSASIGIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+G+ D+ ++L+G S+P FW G++++ + P L + N Sbjct: 121 ISAVKQGTRLDYALRVVSLSGLSLPSFWLGLLVLTASVAMFGQMP----------LFNPN 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 P +F +AVA +PA+V+G A+ +R+TRSSMLEVL +DYIRT Sbjct: 171 P---------------QSFGEAVATYCIPAMVVGFRSSALTMRITRSSMLEVLRQDYIRT 215 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG + V HAL+NA+LPV+TVIG++ L+ G I+TET+F+ PG+ R+L++A++ Sbjct: 216 ARAKGASDAAVNYQHALKNAILPVITVIGIEAAFLIGGLIVTETVFNIPGVARFLVEAIR 275 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP+VQ V+L+A +++ N +VD+LY V +PRIR+ Sbjct: 276 WRDYPIVQNLVMLIAVVVVSANFIVDMLYAVFDPRIRY 313 >UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobacteria RepID=B9JIR5_AGRRK Length = 340 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 129/335 (38%), Positives = 202/335 (60%), Gaps = 7/335 (2%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQY 66 +R+ IP+ IG+ ++TF +PGD +PE AQ+ LGLDKP+W Q+ Sbjct: 9 KRIATAIPSIIGVVIVTFLLARALPGD-AAAYYAGSSATPESIAQIRTALGLDKPLWFQF 67 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 +Y + ++HGDLG S+ S PV+++ R A++EL +CA++FA +G+P+G+ AA + G Sbjct: 68 GNYAFRLLHGDLGTSLSSGQPVFQDLATRLPASIELTLCALLFAMLIGLPLGITAATRPG 127 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS-GRVSDMVFLDDSNP--LTG 183 DH + G + P F+ + L+ + + P GR++D F S P +TG Sbjct: 128 KTVDHICRIIVSVGAAFPTFFVALGLVYVFYFRLGIAPEPLGRLNDTYF---SMPPTITG 184 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 LIDT + G+ F +++ ++LP+I LG LA I R+ R+SML L D+ RTARA Sbjct: 185 LYLIDTLLVGDVAAFWASLSQLVLPSISLGLFALAPIARIARASMLASLSSDFCRTARAM 244 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+R R++ + LRNAMLPVV ++G+ LL +L E +F+WPG+G + ++A+ DY Sbjct: 245 GLSRTRIVYGYGLRNAMLPVVNILGMVFSFLLGANVLVEQVFAWPGIGAYAVNAVITSDY 304 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VQG VL++A + IL+NL VDL ++PR+R+ Sbjct: 305 AAVQGFVLMMAILYILLNLAVDLTAAAIDPRVRYD 339 >UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI5_BREBN Length = 306 Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 132/335 (39%), Positives = 203/335 (60%), Gaps = 32/335 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++++RL ++ T +G+++L F VH+IPGDP + G+ +PE +Q+ A+LGLD+ Sbjct: 1 MRRYVIKRLLSLVGTLLGVSVLIFLMVHLIPGDPATQILGQFA-TPEAISQMRAKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+WQQY+ ++ + GDLG S+ + VW++ + RF T++L + ++I A GI +G + Sbjct: 60 PLWQQYMRFVGNLFTGDLGTSLFTGEKVWDQIMNRFPITMQLAILSVIIAAIFGILLGTI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ +I D V +L G S P FW + LI + + L P+SG Sbjct: 120 AAVKQNTIIDRLVVLTSLLGISAPGFWIALFLIWIFAYKLALFPISGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ++LPAI LG +I RMTRSSMLEV+ +DY+RTA Sbjct: 168 -------------------EGIHSLLLPAITLGMAEAGMIARMTRSSMLEVIKQDYMRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG RVI+ H L NA++PVVT++GLQ G L+AGA++ ET+FS G+G I+A+ + Sbjct: 209 EAKGAALFRVILSHGLPNAIIPVVTMLGLQFGALMAGAVVVETVFSLQGIGSLAIEAISK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD P +QG V +A + L NL+VDL+Y ++PRI Sbjct: 269 RDMPTIQGMVFFMALIFALTNLIVDLIYSRIDPRI 303 >UniRef50_C7R6C9 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6C9_KANKD Length = 319 Score = 246 bits (628), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 219/340 (64%), Gaps = 28/340 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ + R +I + G+TLLTF ++ G+ + + + Sbjct: 1 MLKLLFRHGTTLIVSLFGLTLLTF----------ILSQQGDEALHRYQSEHFFGQ----- 45 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +YL +++ GD G S V +F+ F AT+EL + A++FA +G+ +G++ Sbjct: 46 --YSEYLQFLFA---GDWGYSSIHNRDVLSDFLIHFPATIELVLLALLFAVVLGLTLGIM 100 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +RG D+ +G+ L GYSMPI+WWGM+L++L S+ TPV+GR+ + D P Sbjct: 101 AANRRGKWLDNGLMGMTLVGYSMPIYWWGMLLVLLFSLTLGWTPVAGRID---YAYDITP 157 Query: 181 LTGFMLIDT----AIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 +T FMLIDT A +G + F +A+ H+ILPAI L TIP+A+I RMTRSS+L VL +Y Sbjct: 158 ITRFMLIDTLLNQAEYGLNA-FFNALLHLILPAITLSTIPMAIIARMTRSSLLGVLKAEY 216 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTAR+KGLT+ R++ VHALRNA+LP++T+ G+Q+ +++G I+TE IF+WPG+G+WL++ Sbjct: 217 IRTARSKGLTQQRIVWVHALRNAVLPILTISGVQISIIMSGVIITEYIFAWPGVGKWLLE 276 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 A+ RRD+ +Q G+L ++ M+I NL +DLL +NPR+R Sbjct: 277 AVSRRDFASIQAGILALSLMVIAFNLALDLLASYMNPRLR 316 >UniRef50_D1WR30 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Streptomyces RepID=D1WR30_9ACTO Length = 315 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 143/336 (42%), Positives = 196/336 (58%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRR ++P +G+T+ TF +IPGD + G +R A L +LGLD+ Sbjct: 1 MLTFTLRRALHMLPVILGVTIATFGLGQIIPGDQASALLGPTASEADRQA-LREDLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y Y+ + GDLG S+ PV E R TL L A++ A VG+ +G Sbjct: 60 PAVSRYFTYLGSLFDGDLGRSLSFGRPVSEVLSDRLLNTLLLSGTAIVLAAVVGVAIGTW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS D + L S+P FW+G++LI++ S+ + P +G Sbjct: 120 AAQKPGSHRDRSLTVGVLFFNSVPSFWFGLVLIIVFSLQLRMLPATGM------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 T+I G G +D AHM+LP I L LAVI RMTRSS+LEV+G DY+RTA Sbjct: 168 --------TSIGG--GGALDVAAHMVLPVITLAAWSLAVIARMTRSSVLEVIGNDYVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+ RVI+ H L NAM V+TVIGLQ G LL+GA+LTET+FSWPG+G L A+ Sbjct: 218 RSRGVGEFRVIVRHVLPNAMPSVITVIGLQAGFLLSGAVLTETVFSWPGIGLALHQAISA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD P+VQGG+L++A +L+N LVD+L NP+I+ Sbjct: 278 RDIPLVQGGILVIAIAFVLINFLVDVLQAYFNPKIK 313 >UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncultured archaeon RepID=D1JCG7_9ARCH Length = 320 Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 131/322 (40%), Positives = 208/322 (64%), Gaps = 30/322 (9%) Query: 19 ITLLTFAFVHMIPGDPV-MIMAGERG-ISPERHAQLLAELGLDKPMWQQYLHYIWGVMHG 76 +TL++F+ + +IPGDP I+ G G P+ ++GLDKP++ QY ++ V+HG Sbjct: 24 VTLISFSLLFIIPGDPAETILTGPGGGADPKAVEAFRIKMGLDKPVYIQYFTWLESVLHG 83 Query: 77 DLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGL 136 +LG S +S+ PV + +PRF ATL+L + ++I + + IP+G+++A+K+ S D+ ++ Sbjct: 84 NLGYSYQSKRPVIDTILPRFHATLKLAIVSLIISLLISIPLGIISAIKQYSAIDNVSMVG 143 Query: 137 ALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDG 196 AL G SMP FW G++LI+L ++ PV+G +G+ G Sbjct: 144 ALLGVSMPNFWQGLLLILLFAITLGWLPVAG------------------------YGDHG 179 Query: 197 NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHAL 256 + + H+ILPAI LGT A+ R+ RS+MLE + +DYI+ ARAKGL+ VI HAL Sbjct: 180 D----LEHIILPAITLGTSSAAITTRLMRSTMLETINQDYIQAARAKGLSERVVIGKHAL 235 Query: 257 RNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATM 316 +NA++PVVT+IGL LL G+++ ETIF+WPG+G +++++ RDYP++QG +L VA + Sbjct: 236 KNALIPVVTMIGLNFAYLLDGSVVVETIFAWPGIGLLMVESIYMRDYPMIQGCILFVAII 295 Query: 317 IILVNLLVDLLYGVVNPRIRHK 338 I VNL+VD+LY ++PRIR++ Sbjct: 296 FIFVNLMVDILYTYLDPRIRYE 317 >UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteobacteria RepID=A8I8E2_AZOC5 Length = 334 Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 134/337 (39%), Positives = 208/337 (61%), Gaps = 17/337 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH-AQLLAELGLDKP 61 +F RRL +P +GI + +F +H+ PGD V +MAGE G + A+L A+ GLD+P Sbjct: 14 RFFARRLLQAVPVLLGIVIFSFVILHLAPGDAVDVMAGEAGTGDAAYMAELRAKYGLDQP 73 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q L Y ++ DLG S+++ PV + + R TL L +++ + A+G+ G +A Sbjct: 74 LPVQLLRYGTQILQLDLGYSIRNNSPVRDLILQRLGPTLLLMSVSIVASVAMGVLFGAIA 133 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A++R ++ D +AL Y+MPIFW G+MLI+L SV + P SG Sbjct: 134 AIRRNTLLDDLISLVALLAYAMPIFWIGLMLIILFSVTLGVLP-SG-------------- 178 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 GFM + G +D H++LPA+ L A+ R+ R+SMLEV+G DYIRTAR Sbjct: 179 -GFMDVARQDVGPLARAVDIGRHLVLPALTLSLFYFAIYTRLMRASMLEVMGLDYIRTAR 237 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL +V I H +RNA+LP+VT++G+Q+ +LL GA++ ET+F+WPG+GR DA+ +R Sbjct: 238 AKGLGAAKVTIRHVVRNALLPIVTMLGMQMASLLGGAVVVETVFNWPGIGRLTYDAVFQR 297 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY ++ G +L+ + ++I +N+LVDL Y ++PRI+ + Sbjct: 298 DYALLIGILLMSSALVIFINMLVDLAYSWLDPRIKAR 334 >UniRef50_D1Y6N0 Oligopeptide transport system permease protein AppB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6N0_9BACT Length = 320 Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 137/338 (40%), Positives = 200/338 (59%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG--ERGISPERHAQLLAELGL 58 M +I+RR+ +PT + +LL F+ +++ PGDPV ++ G + +S E+ + + GL Sbjct: 1 MWAYIIRRIFQTVPTLLISSLLIFSLLYVTPGDPVELILGTEDANVSEEQRKLVEEQWGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 DKP +Y+ +I G GDLG S + V+ R TL+L AM+ A V +P+G Sbjct: 61 DKPFLVRYIRFIKGAFVGDLGTSYATGEDVFSSVAKRMPNTLKLAGSAMVIALVVSLPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAA+K I D A LA G S+P FW+G++LI+ ++H P +++ Sbjct: 121 ILAALKHNGILDSVATALATIGVSLPRFWFGLVLIIFFALHLGWLPTMPETTNIA----- 175 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 DG + + +ILPA L A RM RSSML+VL +DY+R Sbjct: 176 ----------------DG-VVPFLRSIILPASSLALSMAATQTRMIRSSMLDVLNQDYVR 218 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR+KGL VI HAL+NAM+PVVTVIG ++G+LL GA++TE+IFSWPG+GR I ++ Sbjct: 219 YARSKGLKEHAVIWGHALKNAMIPVVTVIGGEIGSLLGGAVITESIFSWPGVGRLTISSI 278 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RRDYP++QG L++ +LVNL+VD+LY NPRIR Sbjct: 279 ARRDYPMIQGATLMLCISYMLVNLVVDILYAWFNPRIR 316 >UniRef50_C6A3B4 ABC-type dipeptide transport system, permease component n=22 Tax=cellular organisms RepID=C6A3B4_THESM Length = 339 Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 125/337 (37%), Positives = 213/337 (63%), Gaps = 6/337 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 Q+I+ R ++IPT + + + F F+ ++PG+PV+ + G + ISPE+ L+ GLDKP+ Sbjct: 7 QYIVIRGLMIIPTILILYTIVFIFLRILPGNPVLAVVGTKNISPEQLQHLMEMAGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKSRI--PVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY Y+W ++HGD G+++ + PV E RF ATLEL + + +G+ G + Sbjct: 67 YVQYFDYLWKMVHGDFGVTLAFPMGKPVVEYLKLRFPATLELTLFGFSISVLLGLLTGTI 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ + D ++ Y++ I W+GMML + +H++L P SGR+ + L Sbjct: 127 AAAKKSTKIDTGMRLYSIIAYTLFIPWFGMMLQYVFGIHFHLLPTSGRIDPGIELQR--- 183 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ++D+ + G F AV H+ILPA LG + R+ R++M++VL +D+IR+ Sbjct: 184 ITGLYVLDSLLTGNWEAFSSAVRHVILPATTLGIVLSGAYTRLVRNNMVDVLSQDFIRSY 243 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A+G+ +V+ +AL+NA +PVVT++GLQ LL GA+LTET F+WPG+G +++D + Sbjct: 244 YARGVKDWKVMW-YALKNAFIPVVTLMGLQFAILLGGAVLTETTFNWPGMGTFIVDRIDY 302 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +QG V+ A + L++L+VD++Y +++PR+++ Sbjct: 303 RDYNAIQGAVVFFAFFVGLISLIVDIVYALLDPRVKY 339 >UniRef50_B2SC63 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=B2SC63_BRUA1 Length = 337 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 132/338 (39%), Positives = 207/338 (61%), Gaps = 5/338 (1%) Query: 1 MLQFILRRLGLVIPTFI-GITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGL 58 M + +RL + +P I GI + FA + DP+ + E+ ++ PE A A+ GL Sbjct: 1 MSNYFFKRL-IAMPFLILGIVTIAFALTTITKCDPLTSIVAEQQMNNPEVVAAAKAKWGL 59 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+ + ++Y Y+ + GD+G S ++ PV + + R AT+EL V AMI + +GI +G Sbjct: 60 DRSLPERYFIYLKNLAVGDMGTSFVTKRPVGTDLMARLPATMELVVVAMILGSVIGITLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAA R S+ DH A AL G S+P+FW G+ ++ + SV + + P GR+ + Sbjct: 120 ILAAYYRDSVIDHLARLFALFGSSLPVFWLGLAVLFVFSVQFEILPGPGRLDPR--MTPP 177 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +TGFM ID+ + G+ F DA+AH+ILP++VLG I R+ R++ML+V+G ++I Sbjct: 178 AAVTGFMTIDSLLAGDGAAFRDALAHLILPSLVLGWAVAGTISRLVRANMLDVIGREFIL 237 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG +RV+ HALRN ++PV+TVI L+ GA+LTETIF+WPGLG + ++A Sbjct: 238 TARAKGAGELRVVFRHALRNILVPVLTVISYSFAYLITGAVLTETIFAWPGLGSYAVEAA 297 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + D+P + G ++ M ++ NLL D+ Y + NPR+R Sbjct: 298 RALDFPAIIGVTIVGGIMFLMTNLLTDIAYVLANPRVR 335 >UniRef50_A7NQN2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQN2_ROSCS Length = 316 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 142/339 (41%), Positives = 206/339 (60%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH-AQLLAELGLD 59 M +++L+RL LVIPT G++L+ FA + ++PGD V I+ G + +R Q+ LGL+ Sbjct: 1 MNRYLLQRLALVIPTLAGVSLIIFALMRLLPGDVVDILFGGDTQADQRTLDQIRENLGLN 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QYL +I G + G+ G+SM++ IPV E TL+L V A+ FA IP+G+ Sbjct: 61 RPLAVQYLEWIGGFLSGNFGVSMRTGIPVAESIAQGMPVTLQLAVMAIFFACLFAIPLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AAV+R + D + L G S P FW M +++ S + TP G VS Sbjct: 121 IAAVRRNGVTDMLTRIVGLIGLSFPAFWLATMFLLISSTMFRWTPPLGWVSPF------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +F + M+ PA++L P+A+I+RMTR+S+LEVL +DYIRT Sbjct: 174 ----------------ADFGRNMQMMLAPALLLALQPMAIIMRMTRASLLEVLRQDYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKGL V++ HAL+NA +PV+TVIG+Q G L+ G+I+ E IFS PG+ LI+ + Sbjct: 218 AYAKGLRDRAVLLRHALQNAFIPVLTVIGVQFGVLMGGSIIIEQIFSLPGIAFLLINGIY 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQ VLL++ + +LVNL VDLLY V+PRIR+ Sbjct: 278 NRDYPVVQSTVLLLSLIFVLVNLAVDLLYSAVDPRIRYD 316 >UniRef50_B9ZI20 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZI20_NATMA Length = 302 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 133/326 (40%), Positives = 199/326 (61%), Gaps = 25/326 (7%) Query: 13 IPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWG 72 IP +G+T++ + V+ PG+P + G+ G SPE AQL E+GLD+P +Y ++ G Sbjct: 2 IPVMLGVTIVISSIVYAAPGNPARLALGD-GASPEAVAQLEQEMGLDQPAHIRYFDWMAG 60 Query: 73 VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHT 132 V+ GDLG S++S V + R TLEL + AM + IP+GV++AV++ S D+T Sbjct: 61 VLQGDLGTSIQSGRAVTTLIIERLGPTLELALVAMALTVIIAIPLGVISAVRQYSWVDNT 120 Query: 133 AVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW 192 ++ A+ SMP FW G++LI L +V W PVSGR +I T W Sbjct: 121 SMFFAIFWLSMPSFWLGLILIYLFAVRWQFFPVSGREG---------------VIFTFTW 165 Query: 193 GEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVII 252 + ++LPAI GT ++ R+ RSSMLE+L EDYIRTAR KG+ VI Sbjct: 166 W---------SFILLPAIATGTRRAGLLTRLMRSSMLEILNEDYIRTARGKGIGSKAVIY 216 Query: 253 VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLL 312 H ++NA++PVVT+IGLQV + +G ++ E +FSWPG+GR L+DA+ +RDYPVVQG +L+ Sbjct: 217 THGMKNALIPVVTLIGLQVPLIFSGTVIIEVVFSWPGMGRLLVDAVLQRDYPVVQGTILV 276 Query: 313 VATMIILVNLLVDLLYGVVNPRIRHK 338 + ++++ N VD+ Y ++PRI + Sbjct: 277 YSVIVMVANFGVDIAYTYLDPRIDYS 302 >UniRef50_A6M0G0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M0G0_CLOB8 Length = 323 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 201/334 (60%), Gaps = 18/334 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +++ RRL IP IGI+++ F V + PGDP M + +S E ++L +LG + P+ Sbjct: 6 KYVFRRLIQTIPVLIGISIIVFMLVKLQPGDPFSSMM-DPNLSQEMKEKMLEQLGYNDPI 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ + G+LG S++ + PV R T+ L +C+MI + + IP GV++A Sbjct: 65 LIQYFKWLMQALQGNLGYSIQFKQPVLNVIGSRLGNTVILSICSMILSILIAIPCGVISA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ + D+ A G S+P F++GM+LI + SV+ P+SG V+ V LT Sbjct: 125 TKQFTKTDYIVTVFAFIGLSIPSFFFGMILIKVFSVNLGWLPISGMVTTGV------NLT 178 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G + ID HM+LP IVL + A ++R TRS M+E+L DYIRTAR+ Sbjct: 179 GLPFV-----------IDVAKHMLLPMIVLALMNTASLMRYTRSDMIEILKTDYIRTARS 227 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG+ + VI HAL+N +L ++TV+ +Q+ +LL+GA+LTETIF WPG+GR +A+ RD Sbjct: 228 KGVRKRNVIYQHALKNELLTLITVVTMQIPSLLSGALLTETIFVWPGIGRLNYNAVISRD 287 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 YP++ G V++VA + + NLL D+LY VV+ RI Sbjct: 288 YPLIMGIVMMVAIISLFTNLLADILYAVVDKRIE 321 >UniRef50_B9L4I6 Oligopeptide transport system permease protein AppB n=2 Tax=Bacteria RepID=B9L4I6_THERP Length = 314 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 225/337 (66%), Gaps = 25/337 (7%) Query: 1 MLQFILRR-LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLD 59 M+ F++RR LGLV+ ++G+T+L F+ +H+ PGDP MI+ G + + E A+L ELGLD Sbjct: 1 MVAFLIRRILGLVL-VWLGVTILVFSIMHLAPGDPAMIILGPKA-TAESLARLRHELGLD 58 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QYL ++ V+ GD G S++ + V E RF+AT L A + A A+G+ GV Sbjct: 59 QPLPVQYLRWLGNVLQGDFGRSLQLKRDVSELLWTRFRATALLATAATVIAVAIGLTAGV 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A ++ S++D A+ LAL G+ +P+FW G++L + ++ + PVSG + Sbjct: 119 VSATRQYSVWDRAAMLLALLGFCLPVFWLGLILQIGLAYRLPVFPVSGMNAP-------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G+ G F+D + H++LPA+ LG P AVI RMTRSS+LEV+ +D++RT Sbjct: 171 -------------GQSG-FLDTLHHLVLPAVTLGIGPAAVIARMTRSSVLEVIRQDFVRT 216 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL VI+ H LRNA++PV+T++GLQVG L GA+L E +FSWPGLG +++ + Sbjct: 217 ARAKGLAERVVILRHVLRNALIPVLTIVGLQVGYLFGGAVLVEMVFSWPGLGLLMVNGIL 276 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+PVVQG VL+VAT +LVNLLVD+LY +V+PR+R Sbjct: 277 ARDFPVVQGAVLVVATTYVLVNLLVDVLYTLVDPRVR 313 >UniRef50_A8U4H5 Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT Length = 336 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 210/342 (61%), Gaps = 11/342 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLA----EL 56 ML+F LRR L++ +G+ L+TF H+ P DP + AG P+ + ++ E Sbjct: 1 MLRFTLRRAVLMVFMLLGLLLITFTISHIAPSDPAALAAG-----PDANVAMIERYRVEY 55 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLD+P+++Q+ Y+ ++ G+ G S+ + VW++ V F T+EL +++ A A+G+P Sbjct: 56 GLDRPLYEQFAIYLQRLLTGNWGKSIHTTRQVWDDLVSYFPNTVELVAFSILIAVALGVP 115 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +GV+AAV + DH L ++G +MP+FW G+M + ++H P+ GR+ M D Sbjct: 116 LGVIAAVNQNRATDHIIRILTVSGVAMPMFWLGLMAQLYFALHLGWFPLGGRIEMMT--D 173 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 +T +L+D+ + G+ G F + + H++LP++ L LA I+R+ R+ MLE L +DY Sbjct: 174 PPEAITHLLLVDSLLRGQFGTFAEGLHHIVLPSVALCLPALASIIRVNRAEMLETLKQDY 233 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I ARA GL+ R++ ++AL+NAMLP + +IGL+ G +L G +L ET+F WPG+G + + Sbjct: 234 IVNARAHGLSTFRIVALYALKNAMLPTMAMIGLRFGWMLGGTVLVETVFDWPGIGLYAVQ 293 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A D+ + G +++ ++ N ++DL+YG+++PR+R + Sbjct: 294 AAISSDFEPIMGATIVLGFFFMMTNFVIDLIYGILDPRVRTQ 335 >UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RXZ6_9CLOT Length = 339 Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 131/336 (38%), Positives = 212/336 (63%), Gaps = 3/336 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDK 60 L+FI +RL ++ G+ L F MIPGDP + +R ++ PE A A+ GLD+ Sbjct: 4 LKFIGKRLVYLVVMLFGVATLVFILTKMIPGDPTVANLSQRALNDPEIVAAYRAKYGLDQ 63 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ ++ DLG SM++ PV E + AT+EL + A++ A +G+ G++ Sbjct: 64 PLPVQYILYMKNLLQFDLGTSMRTNKPVLSELARCYPATIELALFAIVIAAILGVLFGII 123 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++R SI D T +++TG S+P FW+ ++++ L P GR+S+ Sbjct: 124 SAIRRNSILDQTVRAISVTGVSIPSFWFALLVLYFFYYKLKLFPGPGRLSNA--FTAPAT 181 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG +ID+ + G +DA +H+ILP VL + +I R RS++L+V+ DYIRTA Sbjct: 182 VTGMYVIDSLLEGNIPKALDAASHLILPGTVLAAFTMGLITRTARSNLLDVMSTDYIRTA 241 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+R +II HAL NA++PV+TVIGL +G LL G +L ETIF+WPG+G++ +++ Sbjct: 242 KAKGLSRPGLIIRHALGNALIPVLTVIGLGLGNLLGGMVLVETIFNWPGVGQFAYESVLS 301 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+P + G LL+A +++N +VD+LYG+++PR+R Sbjct: 302 VDFPSIIGVALLIALNYMVINTVVDILYGIIDPRVR 337 >UniRef50_Q3J951 ABC transporter, inner membrane subunit n=9 Tax=Bacteria RepID=Q3J951_NITOC Length = 309 Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 205/333 (61%), Gaps = 32/333 (9%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 F+L RL +G+ L F +H IPGDPV ++ GE G P L LGLD+P+ Sbjct: 4 FLLSRLLSAAVVVLGVACLVFLLIHFIPGDPVEVILGE-GARPADREALRQALGLDRPLL 62 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q ++ G+ DLG S+ S+ PV E R AT+EL + A++ A + P+GVLAAV Sbjct: 63 VQLSQFLQGLAQLDLGTSLYSQRPVMELLAERLPATVELALAALLVAILIAFPLGVLAAV 122 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 +RG+I+D A AL G S+P FW G MLI++ S+ PVSGR Sbjct: 123 RRGTIWDRAASAFALLGVSVPNFWLGPMLILIFSIGLGWFPVSGRA-------------- 168 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 ++ ++LPA+ LG+ A++ RM R+++LEVLGEDYIRTA+AK Sbjct: 169 -----------------GLSSLVLPALTLGSALAAILSRMVRAALLEVLGEDYIRTAKAK 211 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+ RVI H LRNA+LP++TV+GLQ+G LL GA++TE +FSWPG+G+ I+++QRRDY Sbjct: 212 GLSARRVIWWHGLRNALLPLITVLGLQLGALLGGAVITEVVFSWPGIGQLTIESIQRRDY 271 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 PVVQG VLL++ + VN L DL+YG +PR+R Sbjct: 272 PVVQGCVLLISLTYVAVNTLTDLIYGWADPRVR 304 >UniRef50_A1WN48 Binding-protein-dependent transport systems inner membrane component n=19 Tax=Bacteria RepID=A1WN48_VEREI Length = 317 Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 128/335 (38%), Positives = 208/335 (62%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I R G ++ + +L F GDPV ++ G++ + + A++ E GLDKP Sbjct: 6 LRYIAARAGGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQATAAD-IARVQKEYGLDKP 64 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ +++ V+ G+LG S+ + PV + R + T L + A+ A +G+P G+++ Sbjct: 65 LPVQFGYWLRAVLQGNLGTSIFLQRPVTQALWERAEPTTLLALMAVAIAALIGVPCGIVS 124 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV RG + D G+A+ G S+P FW G++LI + +V + PVSG Sbjct: 125 AVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQVFAVSFGWFPVSG-------------- 170 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D F++ + ++LPA VLG + A+I+R TR+SML+VLGEDY+RTAR Sbjct: 171 ---------YGAPDAPFMERLHALVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTAR 221 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL+ +V++ HALRNA++P+VTVIGL V ++ GA++TET+F PG+G ++ A+ RR Sbjct: 222 SKGLSESKVVLKHALRNALVPIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRR 281 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYPV+QG +L++A + +L+N +DLLY VV+PR++ Sbjct: 282 DYPVIQGALLVIAAIYVLINFSIDLLYAVVDPRVK 316 >UniRef50_B9LRN3 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Halobacteriaceae RepID=B9LRN3_HALLT Length = 339 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 199/329 (60%), Gaps = 18/329 (5%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGD 77 G+ F + PG+PV +A S E AQ+ A+LGLD+P++ QY+ YI G++ GD Sbjct: 20 GVVTAVFLLRFITPGNPVTFVA-PLDASAELRAQIAADLGLDQPLYIQYVDYIGGLLQGD 78 Query: 78 LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLA 137 +G S R AT+EL V A I A + IP+GV++A +R D+ A + Sbjct: 79 MGYSYLRGTEASTIVFARVPATVELAVAATIVAIVIAIPLGVISATRRREPADYGATLFS 138 Query: 138 LTGYSMPIFWWGMMLIMLVSVHWNLTPVSGR----VSDMVFLDD-SNPLTGFMLIDTAIW 192 L G S P FW G+MLI+++SV ++L P S R FL N L+ M + Sbjct: 139 LVGISTPNFWLGIMLILVLSVQFDLFPTSRRPIGFFETFTFLVTVENGLSVPMNV----- 193 Query: 193 GEDGNFIDAVA----HMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRM 248 G F+D + H+ LPA+ LGT A++ R+TRS M+E LG+ Y+R ARAKGL Sbjct: 194 ---GAFLDGLRTWLWHITLPAVTLGTYFTALVTRLTRSGMIEELGQPYVRAARAKGLPES 250 Query: 249 RVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQG 308 + HAL+N ++P+VTV+GLQ+GTL+ GA++TE +FSWPGLG +IDA+ RD+P++QG Sbjct: 251 LIQYKHALQNTLIPIVTVLGLQLGTLIGGAVITEAVFSWPGLGTLVIDAINVRDWPLIQG 310 Query: 309 GVLLVATMIILVNLLVDLLYGVVNPRIRH 337 ++++ T +L+N+ VD LY +NPR+ H Sbjct: 311 SLIVIGTGFVLINIFVDSLYAYLNPRVVH 339 >UniRef50_D1C9Y6 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9Y6_SPHTD Length = 314 Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 142/338 (42%), Positives = 207/338 (61%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I+RRL L IP + + + TF +HM PGDPV ++ G + E+ ++ LGL+ Sbjct: 1 MTRYIIRRLLLAIPVMLLVAVTTFLLLHMTPGDPVSVLLGPDA-TVEQIEEMREALGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q L++ + GDLG S+ PV E R Q TL L + A + A VG+P GV+ Sbjct: 60 PVHIQLLNWFRDLARGDLGESIFLGKPVTEAIAERAQPTLLLTLLASLVAICVGLPFGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+RGS D A+ A+ G SMP FW G+ LI + V PV G P Sbjct: 120 SAVRRGSTIDVGAMLAAMVGISMPTFWLGLNLIFIFGVKLRWLPVQG----------YQP 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L+ +W ++ ++I+PA+ LG A++ RMTRS MLEVL EDY+RTA Sbjct: 170 LS------EGLW-------TSLRYLIMPALTLGAAQGALLARMTRSMMLEVLHEDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ RVI+ HALRNA +P+VTVIGL L++GA++TE +F PG G+ LI A+ R Sbjct: 217 RAKGVSERRVILHHALRNAFIPLVTVIGLTFAVLISGAVVTEQVFGIPGAGQLLIRAVNR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++QG VL+VA + +++NL+VDL+Y ++PRI + Sbjct: 277 RDFPLIQGIVLIVALLYVIINLIVDLIYVFLDPRIHYS 314 >UniRef50_A3ZVY1 Oligopeptide ABC transporter permease protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVY1_9PLAN Length = 302 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 193/310 (62%), Gaps = 8/310 (2%) Query: 30 IPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVW 89 +PG+P + G+ + P R +A G D+P+ Q + ++ GDLG+S V Sbjct: 1 MPGNPALARFGQHSV-PARVTAEMAHQGWDRPILAQLIDLPGELLRGDLGVSFFHGDQVA 59 Query: 90 EEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWG 149 E ATLEL + A++ A +GI GV +A+ RGS D+ A+ AL G S+P+F+ G Sbjct: 60 ERLTETIPATLELSIAAILLAVPLGICAGVASALWRGSWPDYAAMTFALLGVSVPVFFLG 119 Query: 150 MMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPA 209 + L+ + + P SGRV+ + S T F L + G +DAV H++LPA Sbjct: 120 ICLMTIFTS----MPTSGRVAPTMI---SQFHTDFFLCEAIFTGRFALALDAVRHLLLPA 172 Query: 210 IVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGL 269 + L TIP AVI R+TRSSMLEVL DY+RTA+AKG T R++ HAL NA +P+V + G Sbjct: 173 VALATIPAAVISRITRSSMLEVLSSDYLRTAKAKGATLWRIVWRHALPNASVPIVNIAGF 232 Query: 270 QVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYG 329 QVG LL+GA+LTET+F+WPG+GR+L+ A++ +DY VVQGG L++A M + NLL+D+ Y Sbjct: 233 QVGMLLSGAVLTETVFNWPGMGRYLVTAVREQDYAVVQGGALVIAAMFVTANLLLDIAYL 292 Query: 330 VVNPRIRHKK 339 ++PRIR + Sbjct: 293 WLDPRIRTQS 302 >UniRef50_D1C3Y0 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Bacteria RepID=D1C3Y0_SPHTD Length = 315 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 144/338 (42%), Positives = 211/338 (62%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++LRRL +IP +GI+++TFA + +IPGD V ++ G ER +L GLD+ Sbjct: 1 MLRYVLRRLVALIPVLLGISIVTFALIRLIPGDVVDMILGTEVAGGERADELRRLFGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QYL + V+ GDLG SM++ PV +E + R T+EL +++FA + IP G++ Sbjct: 61 PLYKQYLLWAGDVVRGDLGHSMRTGKPVLDEILGRLPTTIELAAFSVVFALLIAIPAGII 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K G+ + L L G S+P FW G +LI++ S + P + VS F DD Sbjct: 121 AALKTGTRTEAGVQTLGLLGLSVPNFWLGTLLILVTSRYLGWFPAATYVS---FTDDP-- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 W + ILP I LG A+ +RMTRSS+LEVL +YI TA Sbjct: 176 -----------WRN-------IQIFILPGIALGAALAAITMRMTRSSLLEVLNREYINTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +VI+ HA++NAM+PVVTV+G+Q+G LL GAI+ E +F+ PG+GR IDA+Q+ Sbjct: 218 RAKGVAERQVILRHAMKNAMIPVVTVVGIQIGRLLGGAIIIEQVFNLPGIGRLAIDAIQQ 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG VL +++NLLVDLLY ++PRIR+ Sbjct: 278 RDYTMIQGVVLFTTFAFVVINLLVDLLYAFIDPRIRYS 315 >UniRef50_A0QRE3 Dipeptide transport system permease protein DppB n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRE3_MYCS2 Length = 319 Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 201/338 (59%), Gaps = 22/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I RL + G++L+ F + ++PGDP + + G G + E A L ELGLD+ Sbjct: 1 MTATIRNRLLSTLLVLFGVSLIVFLLLQLVPGDPAVTILGS-GATAEAVAALRTELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + Q+ Y+ G++ GDLG S+ PV + +PRF T+ L V A+I V +P+GV+ Sbjct: 60 ALPIQFFDYLGGLVRGDLGRSLTVNAPVADIMLPRFANTIILTVAALILCIVVAVPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ SIFD ++ ++L G S+P++W+G++LI +V P SG NP Sbjct: 120 AAHKQYSIFDRVSMMVSLAGASVPVYWFGLLLIGAFAVTLGWLPTSGMY---------NP 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G F D +AH++LPAI +PLAVI RMTRS M+++L +DYIRT Sbjct: 171 ------------RFPGGFTDLLAHLVLPAIAAALVPLAVIARMTRSVMIDILQQDYIRTL 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL+ V+ HALRNA+ P+V +IGLQVG LL G + E +F WPGLG+ L ++ + Sbjct: 219 RASGLSTNSVLWRHALRNALPPIVNIIGLQVGYLLGGVVFVEVVFGWPGLGQQLYTSITQ 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQ GVL +A +++NLL D G+++PR R K Sbjct: 279 RDIPVVQAGVLFIALAFVIINLLADGAVGLLDPRTRRK 316 >UniRef50_D1C940 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C940_SPHTD Length = 320 Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 127/340 (37%), Positives = 203/340 (59%), Gaps = 22/340 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q+++RR+ ++P +GIT++TFA +++PG P+ + + PE ++ LGLD+ Sbjct: 1 MGQYVVRRVLQIVPLVLGITIITFALANLVPGSPISDLEFNPQVRPEDRERIAKALGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ V GDLG+S+ + PV + + + TL L V A+I + + IP+GV Sbjct: 61 PLHVRYIQWLSHVARGDLGLSLITYQPVMKTIMEKLPNTLLLTVTALILSLLIAIPIGVY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV+R S FD A+ G++MP FW G+M+I++ L + G Sbjct: 121 GAVRRNSAFDQVTTVGAVAGFAMPTFWLGLMVILI------LVRMKG------------- 161 Query: 181 LTGFMLIDTAIWGEDGNF--IDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 G + T E GN + + H+I PA VL + A R RS M+EVL +DY+R Sbjct: 162 -AGLPTLPTGGVCELGNCTVLSRIQHLIAPAFVLAFVQTASWTRYIRSQMIEVLRQDYMR 220 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA AKGL + V+ H LRNA+LP+VT++ L + TL +G+++ E IF+W GLGR ++D++ Sbjct: 221 TAEAKGLREVVVVFRHGLRNAILPLVTLLALDLPTLFSGSVIVEQIFTWNGLGRLILDSV 280 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +RDY VV G L V+ + ++ NLL D++YGV++PRIR+ Sbjct: 281 NKRDYTVVMGVTLFVSVLTVVANLLADIVYGVLDPRIRYD 320 >UniRef50_P42062 Oligopeptide transport system permease protein appB n=4 Tax=Bacillaceae RepID=APPB_BACSU Length = 316 Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RR + IP +GIT+L+F + PGDP+ +M + IS Q + + GL+ Sbjct: 1 MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMTLMMDPK-ISQADREQFIEKYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + QYL ++ ++ GD G S+ + PV E + R TL L + + I A + IP GV Sbjct: 60 PQYVQYLKWLGNMVQGDFGTSIVRKGTPVSELIMARLPNTLLLMLVSTILALMISIPFGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW+G++LIM++SV+ P G Sbjct: 120 LSAKRPYSKIDYGITFTSFIGLAIPNFWFGLILIMVLSVNLGWFPTGG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + N D + H+ILPA VL T +A + R TRS+ML+VL +DYIRT Sbjct: 168 ---------VETLNTEFNIFDRIHHLILPAFVLATADMAGLTRYTRSNMLDVLNQDYIRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRNA+LPV+T+ GL + + + G+++ E IF+WPGLG+ +D+ Sbjct: 219 ARAKGFKENRVLFKHGLRNALLPVITIFGLMIPSFIGGSVVVEQIFTWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ A ++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISAVLVVVGNLIADILYAIVDPRIEY 316 >UniRef50_Q11FN3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FN3_MESSB Length = 306 Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 134/341 (39%), Positives = 198/341 (58%), Gaps = 37/341 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDP-VMIMAGERGISP-ERHAQLLAELGL 58 M F++ RL +G+++ F F+ I GDP + + E + ER +L+ G Sbjct: 1 MADFLISRLLYAAAVLLGVSVAVF-FLIRIGGDPSALFLPPEAPVEEIERFRRLM---GF 56 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+ QY ++ + GD G+S++ P + + R ATL+LG A++ + + IP+ Sbjct: 57 DRPLAVQYFDFLGRALQGDFGMSLRYDQPAMKLVLERVPATLQLGAMALLMSLVISIPLA 116 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAA K GS D ++ +L G S P FW +MLI+L S + L P SGR Sbjct: 117 ILAAAKHGSAIDRASLLASLLGQSFPAFWLAIMLILLFSETFRLLPPSGR---------- 166 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 W + +I+PAIVL T A+I R+ RSSM+EVL DY+R Sbjct: 167 -----------GTWQQ----------LIMPAIVLATYSTAIITRLLRSSMIEVLQSDYVR 205 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR KG+ R+I+ HALRNA +P +TVIGLQVG LL GA++TE +F++PG+GR I A+ Sbjct: 206 TARGKGVKESRIILSHALRNAAIPTLTVIGLQVGALLGGAVITEEVFAYPGVGRLAIQAI 265 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD+ VVQ V+L+A +I+ +NLLVDL YG+++PR+R K Sbjct: 266 ANRDFTVVQAFVVLMAALIVTINLLVDLSYGLLDPRLRKGK 306 >UniRef50_A8TW72 Peptide ABC transporter, permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW72_9PROT Length = 313 Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 145/338 (42%), Positives = 214/338 (63%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 MLQ I RL + IP IG+ L+ F + ++P DP ++AG E A + +GL++ Sbjct: 1 MLQHIAHRLLISIPVLIGVLLVGFLLLQVVPTDPATVVAGPTATHVEIEA-IREAMGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ V+ GDLG SM S PV E T+EL + ++I+A +GI +G L Sbjct: 60 PIYVQFGIYLTRVLQGDLGRSMISNSPVVTELANTVGPTIELMLASLIWAVPLGIVLGTL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RG + D + +++ G SMPIFW+G+MLI V HW L P GR P Sbjct: 120 AAVRRGRMSDRIIMAVSVAGVSMPIFWFGLMLIQYVGFHWQLFPFQGR---------GGP 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L W G + H++LPA+ LG + + + RMTR+S+LEVLG D++RTA Sbjct: 171 L----------WTLSG-----LDHIVLPALTLGGVFIGPVARMTRTSLLEVLGSDFVRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ RV++ HALRN+++PVVT+IGLQ+G LL GA++TET+F+WPG+GR + A+ Sbjct: 216 RAKGVSERRVVVSHALRNSLIPVVTLIGLQIGFLLGGAVVTETLFAWPGVGRLAVGAITS 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY + QG +L++A +LVNLLVD+LY V++PR+R + Sbjct: 276 ADYALAQGAILVLALSFLLVNLLVDVLYAVLDPRVRAR 313 >UniRef50_P77308 Probable D,D-dipeptide transport system permease protein ddpB n=53 Tax=Bacteria RepID=DDPB_ECOLI Length = 340 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 213/329 (64%), Gaps = 4/329 (1%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQY 66 R GLV+ G+ ++TF H+IPGDP ++AG+R S + +LGLD+P++ Q+ Sbjct: 10 RCWGLVL-VVAGVCVITFIISHLIPGDPARLLAGDRA-SDAIVENIRQQLGLDQPLYVQF 67 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 Y+ + HGDLG S+++ PV EE F ATLEL A++ A +GIP+G+L+AV R Sbjct: 68 YRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRN 127 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFML 186 DH +A+TG S P FW G+ +I+L H + P GR+ D +LD +TGF L Sbjct: 128 RWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDD--WLDPPTHVTGFYL 185 Query: 187 IDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLT 246 +D + G F +A+ H+ILPA+ L + L ++ R RS+MLE L EDYIRTARA GL Sbjct: 186 LDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLP 245 Query: 247 RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVV 306 +++ +AL NA++P +TV+GL +G LL GA+LTET+F+WPG+G W++ ++Q D+P V Sbjct: 246 GWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAV 305 Query: 307 QGGVLLVATMIILVNLLVDLLYGVVNPRI 335 G ++V+ +LVNL+VDLLY ++PRI Sbjct: 306 MGFAVVVSFAYVLVNLVVDLLYLWIDPRI 334 >UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Tax=Actinobacteria (class) RepID=A4AG90_9ACTN Length = 353 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 205/337 (60%), Gaps = 3/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLD 59 ++ ++LRRLG + G+T++TFA +++PGDP+ GE S P + E GLD Sbjct: 17 LVGYLLRRLGTSVLLLFGVTVVTFALANLVPGDPIAAALGEGAASNPATVEAYIQERGLD 76 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY +YI G+ GD+GIS+++ PV + AT+E+ + A++ + VG+ +G Sbjct: 77 QPLPVQYANYIGGLFQGDMGISLRTAQPVASDLAKAVPATVEIALLAIVVSLGVGVALGS 136 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA +RG I D +L G S+P FW ++ + + P +GR+S ++ + Sbjct: 137 LAAYRRGKISDQLVRVFSLIGLSIPTFWMALVSFNFFFLQLRIAPGAGRLSPVLPPPPT- 195 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TGF +D+ + G+ F DA+AH++LP VL + ++ R R+S+LEVL DY+R Sbjct: 196 -VTGFYTVDSLLAGQWVTFTDALAHLMLPVFVLSLFTIGLLTRFVRTSVLEVLDADYVRA 254 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 RAKGL+ R++ + LR A LP++T++GL GTLL+G +L E +F+WPGLG + ++ Sbjct: 255 GRAKGLSGSRLLFGYVLRGASLPILTIVGLAFGTLLSGTVLVEAVFAWPGLGSYAYNSAT 314 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P V G L+V + + +N VDLLYGV++PR+R Sbjct: 315 SLDLPGVMGVGLVVGVVYLSINFAVDLLYGVLDPRVR 351 >UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteria RepID=C0ZCW7_BREBN Length = 311 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 136/339 (40%), Positives = 196/339 (57%), Gaps = 36/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIM--AGERGISPERHAQLLAELGL 58 M F++RRL + + ITL+ F V M GDPV IM AGE + E +L LGL Sbjct: 1 MAAFLIRRLLHSVFVVLAITLVIFVLVRM-TGDPVSIMFQAGEP--TKEAITELRKNLGL 57 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P++ Q+ Y+ + G+ G S ++ V + + ATL L M A + IPVG Sbjct: 58 DEPVYVQFGLYLKDMFTGNFGTSFRTGESVIDMMNEKMGATLLLAFGGMFVALLIAIPVG 117 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++AV RGS+ D +L G S P FW G+MLI++ +V P SG Sbjct: 118 IISAVYRGSVADFFGRIFSLLGISFPNFWLGIMLIIIFAVKLGWFPASGY---------- 167 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + +++LP++ LG I ++ R+ RSSMLEV+ + YI Sbjct: 168 ---------------------EGLEYLVLPSVALGLILSGILARLVRSSMLEVMNQQYIN 206 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR+KG+ VII H LRNA++P VT IGLQ GTLL G ++ E +FSWPG+GR LIDA+ Sbjct: 207 TARSKGIKEWLVIIKHGLRNALIPTVTFIGLQFGTLLGGTVIIEQVFSWPGIGRMLIDAI 266 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RD+PV+QG V++++ ++I VNLLVDL YG ++PRIR Sbjct: 267 SQRDFPVIQGSVIILSFLMIFVNLLVDLSYGFIDPRIRQ 305 >UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=3 Tax=Paenibacillaceae RepID=C0Z5Q8_BREBN Length = 323 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 126/336 (37%), Positives = 199/336 (59%), Gaps = 22/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++RR+ + IT+++F +H PG P+ +M G+SPE + +GLD+ Sbjct: 1 MTEYLVRRVLQAVLVLFLITVVSFGLMHAAPGGPLKVMLSP-GMSPEAQLIQMKNMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY+ ++ ++ GDLG + K+ +PV + P T L A + + IP G+ Sbjct: 60 PVYIQYMKWVGNLLQGDLGHTFKNNVPVGDILWPTVWNTFVLMSVAWGLSMLIAIPWGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + K+ + D A +A G++MP FW+G+ML ++ NL P+S Sbjct: 120 NSTKQYGLSDQIASIVAYLGFAMPTFWFGIMLQQYFAMQLNLLPLS-------------- 165 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D G++G D + H+ILP VL + +A V+ TR+SMLE L +DYIRTA Sbjct: 166 -------DMYTMGKEGQISDLILHLILPVTVLTLVNIAAYVKYTRASMLEALEQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI HALRNA++PVVT+IGL + TL+AGA LTE++F+WPG+GR ++ Sbjct: 219 RAKGMKERRVIFRHALRNALIPVVTIIGLDLPTLVAGAALTESVFNWPGMGRLFVEMAVA 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 R+Y V+ LL++ M+I+ NLL DL+Y +V+PR++ Sbjct: 279 REYSVLMSITLLISLMVIIGNLLADLIYALVDPRVQ 314 >UniRef50_A1WQT8 Binding-protein-dependent transport systems inner membrane component n=13 Tax=Proteobacteria RepID=A1WQT8_VEREI Length = 338 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 139/337 (41%), Positives = 198/337 (58%), Gaps = 18/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML+ RL + + +L F VH PGDPV +AG G+SPE AQL + GLD Sbjct: 17 MLRHTAARLLQAAGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRQQYGLD 76 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ Q Y+ V+ GDLG S PV + R ATL L + A+ A VG +GV Sbjct: 77 QPLPVQLWVYLGKVVQGDLGHSYFFNQPVAQMIAARVPATLLLMLSAVSLAFGVGTALGV 136 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A K L+L G++ P+FW G+ML++L++ + PV+G M +D S Sbjct: 137 LSARKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLASVLPILPVAG----MRSIDASG 192 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G G+ +D H++LP + L + LA R+ RS+ML+VLG D+IRT Sbjct: 193 -------------GGIGDVLDVAHHLVLPTLTLSLVYLAQYSRLARSAMLDVLGADFIRT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V+ HALRNA+LPVVTV+GLQ G +LAGAIL ET+F+WPGLGR +++ Sbjct: 240 ARAKGLAERVVLYRHALRNALLPVVTVLGLQFGNMLAGAILVETVFNWPGLGRLAFESVL 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RRDYP + G +L + +++ +N + DL Y +++PRI+ Sbjct: 300 RRDYPTILGVLLFSSIVVVAMNQITDLCYRLIDPRIK 336 >UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD Length = 316 Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 128/338 (37%), Positives = 202/338 (59%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I+RR + IP GIT+L+FA + PGDP+ +M + IS + + + GLD+ Sbjct: 1 MITYIIRRTLMSIPILFGITILSFAIMKAAPGDPMALMM-DPTISAGDREKFIEKYGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P QYL ++ ++ GD G S+ + PV + + R TL L + + I A + IP+GV Sbjct: 60 PEHVQYLKWLGNMVQGDFGTSIVRKGTPVTDLIMARLPNTLLLMLVSTILALLISIPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW G++LIM ++V+ P G ++ Sbjct: 120 LSARRPYSKLDYGITFTSFIGLAVPNFWLGLILIMFLAVNLGWFPTGGVMT--------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + D ++W D + H+ILPA VL T +A + R TRSSML+VL +DY+RT Sbjct: 171 -----LNADFSLW-------DRIHHLILPAFVLATADMAGLTRYTRSSMLDVLRQDYMRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRN +LPV+T+ GL + + + GA++TE IFSWPGLG+ +D+ Sbjct: 219 ARAKGFKENRVVYKHGLRNGLLPVITIFGLMIPSFIGGAVVTEQIFSWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ AT++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISATLVVIGNLVADILYAMVDPRIEY 316 >UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNV7_MEIRU Length = 335 Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 137/320 (42%), Positives = 205/320 (64%), Gaps = 3/320 (0%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGD 77 G+T TF +++P DP + G+ E+ + GLDKP+WQQYL Y+ ++ GD Sbjct: 18 GVTFATFFIANVVPIDPAIAALGDNA-REEQIKEFRERYGLDKPIWQQYLIYMGRLLSGD 76 Query: 78 LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLA 137 LG S++++ PV E+ F ATLEL V A + +G+P G+LAA+++ D T LA Sbjct: 77 LGNSLRTQRPVAEDLKEFFPATLELSVAAFLVTLLLGVPAGILAALRQNKATDVTVRILA 136 Query: 138 LTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGN 197 L G + P+F+ ++L +++ +L PV GR+ F +TG M +D + + Sbjct: 137 LIGGATPVFFLAVLLQYVLARELDLLPVQGRLDGFTF--PPPRITGLMGLDALLARDWAA 194 Query: 198 FIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALR 257 F+D++ H++LPA VLG A++ RMTR++MLEVL +DYIRTARAKG+ V+ HAL+ Sbjct: 195 FLDSLRHLVLPAFVLGLFSAAILARMTRATMLEVLSQDYIRTARAKGVPGRAVVFRHALK 254 Query: 258 NAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMI 317 NA LPV+T++G +G LL+GA+LTETIFSWPG+GR++ + D+P V G LLV + Sbjct: 255 NASLPVLTLLGGLLGGLLSGAVLTETIFSWPGIGRYVTQSATSLDFPAVMGVTLLVGLVY 314 Query: 318 ILVNLLVDLLYGVVNPRIRH 337 L+NL+VDLLY ++PRIR+ Sbjct: 315 ALINLIVDLLYAFLDPRIRY 334 >UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11 Tax=Proteobacteria RepID=A1UTK3_BARBK Length = 357 Score = 233 bits (593), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 138/338 (40%), Positives = 197/338 (58%), Gaps = 9/338 (2%) Query: 4 FILRRLGLVIPTFI---GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 F ++ L L+I F+ G+ +TF ++P DPV+ + G+ IS E + + +LGLD+ Sbjct: 24 FFVKSLKLIISIFVTLLGLVTITFFIGRLLPLDPVIAVLGDN-ISQEAYDIMFHKLGLDQ 82 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY +Y+ + D G S+ S V + + F ATLEL A+I +T+VGIP+GV Sbjct: 83 PLIVQYWNYLQNIFVFDFGDSLISGRSVLSDIIRVFPATLELATIAIIISTSVGIPLGVF 142 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMM--LIMLVSVHWNLTPVSGRVSDMVFLDDS 178 AA+ R S D+ L YS P FW G+M L+ + W P GR+ D V+ Sbjct: 143 AAMYRNSCIDYFVRIFTLISYSTPTFWLGLMALLVFYAKLGWIGGP--GRI-DFVYEYSF 199 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 TGF L DTA G+ F +A +H+I+PA++L +A I RM R M+E + ++YI Sbjct: 200 EATTGFFLWDTARQGQWEAFGNAFSHIIMPALILAFGGMAYISRMVRGFMIEQINQEYII 259 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR KGL+ R + HA RNA + +TV+GL LL GA+LTET+F+WPG GR+L +AL Sbjct: 260 TARVKGLSWARTVWSHAFRNASVQTITVVGLSYAFLLEGAVLTETVFAWPGFGRYLTNAL 319 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D V G LLV + I +NLL DLLY + +PR R Sbjct: 320 LAGDMNAVLGCTLLVGCLFISINLLSDLLYHIFDPRTR 357 >UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bacteria RepID=A8I2Z1_AZOC5 Length = 343 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 127/330 (38%), Positives = 196/330 (59%), Gaps = 3/330 (0%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQY 66 RR +P +G+ + TF + ++PGDP + A E + ++GLDKPM +Q Sbjct: 13 RRFLSSLPALLGVLVFTFLLMRVLPGDPAVFFASGPTAGKEEIETIRKQMGLDKPMPEQL 72 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 Y+ V G+LG S+ + PV + R A+LEL A+ A +P+G+ AA++ G Sbjct: 73 GRYLVDVAQGNLGRSLTTGQPVSADLKERLPASLELTFAALFIALLSAVPLGIAAALRPG 132 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTP-VSGRVSDMVFLDDSNPLTGFM 185 S+ DH L G +P F G++LI + P +GRV +F TGF+ Sbjct: 133 SVVDHGVRLLCALGVCVPTFVSGLLLIYVFYYLLGYAPDPTGRVD--IFTSLPPRATGFL 190 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 LID A+ G+ + A + ++LPA + +A + R+TR++ML LG D++RTAR+ GL Sbjct: 191 LIDFALAGDFEGWRAAASQLVLPAFTMALFVVAPLARITRAAMLSSLGSDFVRTARSIGL 250 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 +R R+I+V+ALRNA+LPV+T+ G+ T+L +L E +FSWPG+ + +DAL DY Sbjct: 251 SRWRIIVVYALRNAILPVLTITGIVFSTMLGANVLVEKVFSWPGVASYALDALLASDYAP 310 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 VQG VLL+A + +LVNL++D+LYG+ +PRI Sbjct: 311 VQGFVLLMAFIFVLVNLVIDILYGIADPRI 340 >UniRef50_Q1GD19 Binding-protein-dependent transport systems inner membrane component n=141 Tax=Proteobacteria RepID=Q1GD19_SILST Length = 383 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 132/324 (40%), Positives = 196/324 (60%), Gaps = 6/324 (1%) Query: 15 TFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVM 74 TF+G+ +TF +IP DPV+ + G+R + A +A +GLD+P+ Q++ Y+ V Sbjct: 64 TFVGLMAITFFIGRVIPIDPVLAVVGDRATQEQYDAARIA-MGLDQPLVVQFITYVGDVF 122 Query: 75 HGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAV 134 GDLG S+ + PV E+ F ATLE+ +I +G+P+GV AA ++G+ D Sbjct: 123 QGDLGHSVSTNRPVAEDLARVFPATLEMATLGIIIGVGMGVPLGVWAAARQGTWVDQLIR 182 Query: 135 GLALTGYSMPIFWWGM--MLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW 192 AL GYS+P FW G+ +++ + W P GRV D+ + P TG +L+D+ I Sbjct: 183 VFALLGYSVPAFWLGLVGLVVFYAGLGWVGGP--GRV-DIFYEGLVEPRTGLLLVDSLIV 239 Query: 193 GEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVII 252 G+ F A+ H+ILPA +LG LA I RMTRS ML+ LG++YI TAR KG++ RVI Sbjct: 240 GDWEVFWSALDHLILPATILGFFSLAYIARMTRSFMLDQLGQEYITTARVKGVSEWRVIW 299 Query: 253 VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLL 312 H R +P++TVIGL LL G+++ ET+FSWPG+G +L AL D V G L+ Sbjct: 300 THGFRPIRVPLITVIGLSYAALLEGSVMIETVFSWPGIGNYLTVALLNADMNAVLGATLV 359 Query: 313 VATMIILVNLLVDLLYGVVNPRIR 336 + ++ IL+N L D+LY +++PR R Sbjct: 360 IGSVFILINKLSDVLYRILDPRSR 383 >UniRef50_A7LH29 Dipeptide ABC transporter dppB (Fragment) n=1 Tax=Helicobacter cetorum RepID=A7LH29_9HELI Length = 236 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/237 (51%), Positives = 176/237 (74%), Gaps = 3/237 (1%) Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH 159 +EL + A++ + VG+ VGV+A +KR S+ D+T++ +AL G SMP+FW G+M+I + SV Sbjct: 1 IELALSALVISIVVGVLVGVIAGIKRYSLGDYTSMTIALAGVSMPVFWLGLMMIYIFSVK 60 Query: 160 WNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAV 219 PV GR+SD +LD +GF LID+ I + G F+DA+ H+ILP+I L TIP A+ Sbjct: 61 LGWFPVFGRLSDAYYLDGP---SGFYLIDSLIARDYGAFLDAIRHLILPSIALATIPTAI 117 Query: 220 IVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAI 279 I RMTR+S++EVL E+Y+RTA+AKG + RV+ VH LRNA++PV T++GL + LL G+I Sbjct: 118 IARMTRASIIEVLKEEYVRTAKAKGCSSFRVVFVHVLRNALIPVTTIVGLMLAGLLGGSI 177 Query: 280 LTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 LTET FSWPG+G+W+++AL +RD+P++Q L++A I NLLVD+LY ++NPRIR Sbjct: 178 LTETTFSWPGVGKWIVNALNQRDFPIIQSMSLVIAVFYIGANLLVDVLYALINPRIR 234 >UniRef50_A9EE52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EE52_9RHOB Length = 328 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 189/332 (56%), Gaps = 18/332 (5%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHA-QLLAELGLDKPMW 63 I+ RL + + I LL F + + PGDP +MAG+ G + E+ QL ++ GLD+P+ Sbjct: 10 IVLRLAKAVAVILAIVLLNFILIRLAPGDPASVMAGQAGAADEKFMLQLRSQFGLDQPLP 69 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q YI G+ GDLG S + V E + R ATL L A A GI +G LA + Sbjct: 70 VQAWDYIAGIFQGDLGYSYRQGTAVSELILDRLPATLLLTGTAFAIALLGGIAMGSLAGL 129 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 G D ++L Y+ P+FW G+M I+L SV+ + P G G Sbjct: 130 NAGRPIDFVISVVSLIFYATPLFWVGLMSILLFSVYLDWLPAFGMTQ-----------VG 178 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 L A F+D H++LPA LG +AV RMTR+S+LEV +D++RTARA Sbjct: 179 SRLTSWA------YFLDVARHLVLPATTLGLFYMAVYARMTRASILEVRDQDFVRTARAM 232 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL R R++ H LRNA+LP++T+ G+Q G L+ GAILTET+F WPG+GR DAL +RDY Sbjct: 233 GLPRRRIVRSHILRNALLPIITLAGIQAGQLVGGAILTETVFGWPGIGRLAFDALLQRDY 292 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 V+ G + + M++ N++ DLLY V++PRI Sbjct: 293 QVLLGVFFVTSIMVVAFNIITDLLYRVIDPRI 324 >UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3H5_DEIDV Length = 317 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 195/339 (57%), Gaps = 23/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV-MIMAGERGISPERHAQLLAELGLD 59 M +++RRL IP + IT + F + PGDP+ + ++ IS ++ + ELGLD Sbjct: 1 MGTYVVRRLLTTIPLLLVITAIIFTMLQFTPGDPMDAYIPPDQVISVQQREIIRTELGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P QYL ++ GDLG +K+ PV E R TL L M A+G+ GV Sbjct: 61 QPKPVQYLRWLGKAAQGDLGYRIKNGEPVTSEIARRLPPTLMLMGLGMTLGVALGVFFGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAAVKR + D+ LA G S P F G++ + + ++ P G + Sbjct: 121 LAAVKRYTALDNGLTFLAFLGISTPAFLAGLIGMYVFALKLQWFPAGGYQTP-------- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 DG+ +D ++H+ILPA +L +AV++R TRSS+L+V+ +DY+RT Sbjct: 173 --------------GDGSVLDTLSHLILPASILSVTYIAVLMRYTRSSVLDVVFQDYVRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKG+ RVI H LRNA++PVVTVIG V L+ GA+ E+IFSWPG G+ +DA+ Sbjct: 219 ASAKGVPHTRVISKHVLRNALIPVVTVIGANVANLIGGAVFLESIFSWPGTGQLYLDAID 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L++AT+I+L NL+ D+LYG ++PRIR+ Sbjct: 279 SRDYPMIMGTTLVLATVILLANLITDVLYGAIDPRIRYS 317 >UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH75_9FIRM Length = 321 Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 124/332 (37%), Positives = 205/332 (61%), Gaps = 24/332 (7%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQY 66 ++L +IP + ++++ F ++++PG+ M + G+ G + E+ QL AELGLD+P++ QY Sbjct: 9 KKLLSMIPLALIVSIILFGLINLLPGNAAMAILGDSG-NLEQIEQLEAELGLDQPVYIQY 67 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 ++++ GV GDLG S+ + PV + R T EL V +++FA AVG+P+G++ AV+R Sbjct: 68 INWLKGVCTGDLGTSILTGQPVIDRIAERMPVTFELIVLSVVFAAAVGVPLGIICAVRRN 127 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFML 186 D+ +++ G +MP FW GM+LIML S+ + P SG F + NP Sbjct: 128 RASDYILSSVSIIGVAMPAFWVGMLLIMLFSIKLHWLPASGYTP---FFE--NP------ 176 Query: 187 IDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLT 246 ++ + M LP G A IVR TRS++L+VLG+DY+ TA++KG+ Sbjct: 177 ------------VENLRSMALPVFATGIALAATIVRQTRSAVLDVLGQDYMMTAKSKGVR 224 Query: 247 RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVV 306 + HAL+NA++PV+T I +Q+ ++ G+++ ET+F PG+G+ ++DA+ +RDYP+V Sbjct: 225 YRTQLWRHALKNALIPVITAISMQIAGMIGGSVVIETVFLLPGMGKSMVDAIFQRDYPIV 284 Query: 307 QGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 G L++A IIL+N LVD++Y V+PRI Sbjct: 285 MGEALVIAVFIILLNTLVDVIYIFVDPRISRS 316 >UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D511_DESK1 Length = 324 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 128/334 (38%), Positives = 200/334 (59%), Gaps = 19/334 (5%) Query: 4 FILRR-LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 F+ RR V+ FI +++ +F ++PGDP+ +M + ++ ++ A L + GL+KP+ Sbjct: 8 FLTRRAFSSVLSIFILLSI-SFILFRLLPGDPISLMFRDPRLTQDQLAYLREKFGLNKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 W+QY Y+W + GDLGIS + PV E + R TL L + A I + +G+ GV++A Sbjct: 67 WEQYFIYLWNTVRGDLGISFYYKQPVTEILLERIVNTLMLLIPATIVSILLGVLTGVVSA 126 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + GS+ D G AL Y++P +W G +LI L S+++ PV+G + D Sbjct: 127 WRHGSLVDKVVSGSALVLYTLPTYWLGGLLI-LASINYLHLPVTG-------MRDYGVHY 178 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ML + D +HMILP I L + + R+SML+VLGEDYIRT A Sbjct: 179 SSML---------EHLYDLASHMILPFITLVLVNYGGFTLLVRASMLDVLGEDYIRTYYA 229 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 G R++ + L+NAMLP +T I + + T ++GA+LTETIF+WPG+GR + +A+ RD Sbjct: 230 VGFREGRILFKYGLKNAMLPTLTAISIAIATSVSGAVLTETIFAWPGIGRLIYEAVYNRD 289 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 YP++QG L++A ++L NL+ DLLYG+++PR+R Sbjct: 290 YPLLQGAFLVIAVSVVLANLIADLLYGLIDPRVR 323 >UniRef50_A8F7V7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F7V7_THELT Length = 317 Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 125/336 (37%), Positives = 205/336 (61%), Gaps = 24/336 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKPM 62 +++RR+ IPT + + + F +H++PGD V +M G + ++ E+ +L + GLDKP+ Sbjct: 5 YLIRRIITSIPTVLFVAFVVFIIIHLVPGDVVDMMLGTQNYLTQEQIQELYKQYGLDKPL 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 Q+ ++ ++ D G S++S V V RF TLEL + +M FAT +GIP+G++AA Sbjct: 65 IVQFGVWLKNLVTLDFGTSLRSGKKVAALIVDRFPVTLELSILSMFFATIIGIPLGIIAA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +K+ S D + L G S P FW G +LI++ + Sbjct: 125 IKKNSFTDGLVRVIGLVGLSSPSFWVGAILIVIFA---------------------GLFK 163 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 GF + ED F+ + M LP++ LG + A I+RMTRSSML+VL ++YI+TA+A Sbjct: 164 GFNIFGYVRMQED--FLKNLQVMFLPSLTLGLMLSAQIMRMTRSSMLDVLQQEYIKTAKA 221 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG++ ++I HAL+NA++P++T+ G+Q+G LLAG I+ E +F+ PGLGR L+ A+ RD Sbjct: 222 KGVSYSKLIGKHALKNALIPIITLSGIQLGYLLAGTIVIENMFALPGLGRLLLQAVNERD 281 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YPV+Q V+ +A +I+ +N++VD +Y +++PR+ K Sbjct: 282 YPVIQFVVMFIALIIVALNIVVDFIYTLIDPRVELK 317 >UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID=B5GK78_9ACTO Length = 324 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 141/336 (41%), Positives = 203/336 (60%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 + ++ RRLG+ + T + +++ F V +PGD +AGE+ SPE A + E GLD Sbjct: 8 LTSYLARRLGMSLVTMVLVSIAVFLGVRAMPGDTAQALAGEQ-TSPEVLASIRQEYGLDD 66 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY Y+ + GDLG S ++ +PV + TLEL A++ A VGI GVL Sbjct: 67 NIAVQYWRYLSHAVTGDLGTSARTGLPVLDSIREALPITLELAALALLLAVVVGIGAGVL 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV++G + A G+AL G S+P FW G++L++ ++ + SG V Sbjct: 127 AAVRKGKPSEWLANGIALLGMSVPSFWLGIILVLAFAIATPVFAASGFVP---------- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +G D ++ + ++LPAIVLG+ AV++R TR++ML+ L DY RTA Sbjct: 177 -----------FGTDP--LENLRRLVLPAIVLGSGLAAVVMRQTRAAMLDSLSADYTRTA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLTR +VI HALRN+++ VVTV+GLQ+G L++GA++TE +F PG G+ IDA+ Sbjct: 224 RAKGLTRRQVIGGHALRNSLVTVVTVLGLQLGQLISGAVVTEQVFVLPGFGKLTIDAVFT 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY +VQG VL + ILVNLLVD LY VV+PRIR Sbjct: 284 RDYAMVQGVVLFTSAAYILVNLLVDFLYSVVDPRIR 319 >UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUX1_9CLOT Length = 315 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/338 (36%), Positives = 195/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ + +RRL IPT I + ++ F + +PG+P + M + + E A + A++GLD+ Sbjct: 1 MINYTIRRLLSAIPTLIIVAVMVFFLIRCVPGNPALTMLSDDA-TVEEIAAMEAKMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ ++ + GD G S+ P + R ++T L + AM F+ +G+P+G+ Sbjct: 60 PVPVQFAKWVGNAVRGDFGSSIYYDEPAMSVVMSRLESTWMLVIMAMFFSILIGVPLGIT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D + L++ G SMP FW + L++L ++ + P G Sbjct: 120 AAVHRNGPLDKLCMVLSMIGISMPGFWLALNLVILFAIKVPIFPAVGYA----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +G + ++ +++LPAI LG A + R+TRSSML+VL DYIRTA Sbjct: 169 -----------YISEGGLVKSMRYLLLPAIALGLQRSASLARVTRSSMLDVLNSDYIRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL V+ VHAL+NAM ++T +G+ + LL GAI+ E +F+ PGLGR D++ R Sbjct: 218 RSKGLRERAVVYVHALKNAMNQIITQLGISIAHLLGGAIVMENVFNIPGLGRLAFDSIVR 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +L VA + ++VNL+VDLLY +PRI +K Sbjct: 278 RDYPVIQAHILYVAFIYVIVNLIVDLLYKFFDPRIEYK 315 >UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ4_9RHOB Length = 342 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 195/339 (57%), Gaps = 4/339 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +L+ +LRRLG+ + IG+++L FA +IPGDP I G + E+ + E+ LD+ Sbjct: 4 VLRILLRRLGISVIVLIGVSMLIFAIARIIPGDPARIALGPNA-TAEQVVMIRTEMHLDE 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY H++ V+ GDLG S+ + PV + ATLEL + A I G+P+G+L Sbjct: 63 PIVAQYGHFVADVLRGDLGTSLYTNRPVTTDIAEFLPATLELVIFAGILMVGFGLPLGIL 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA RG DH L L S P F W ++L++L + + L PV+GR+ D Sbjct: 123 AARHRGRWPDHVVRVLTLLTVSAPSFVWAVILMLLFAFYLPLFPVAGRLDSAY---DITR 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF+ +DT I G G F+DA+ H++LPA+ L + R+TR++M+E + YI A Sbjct: 180 VTGFLTVDTLIAGNFGAFLDALHHLVLPAVALALSGIGQAARLTRANMVETYDKPYIEMA 239 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G R+ +A + +++P +T+IGL +L A L E +F+WPGL R+ + + R Sbjct: 240 EAYGFFPSRIARRYAFKPSLIPSLTIIGLDFAAMLGNAFLVEAVFAWPGLSRYGVAVILR 299 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +D + G VL++A ++VN++VDLL +N RIRH Sbjct: 300 KDLNAIMGTVLIIALTFLVVNIIVDLLIAFLNTRIRHST 338 >UniRef50_A6TS96 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Clostridia RepID=A6TS96_ALKMQ Length = 321 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 126/338 (37%), Positives = 191/338 (56%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL IP IG+++L FA + PG P+ + ++ E+ QL GL++ Sbjct: 1 MGKYILRRLFQQIPILIGVSILLFAIFQLAPGSPLASFYMDPSMTSEQMEQLEEAYGLNR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ GV+ G+LG S + R PV R T + ++ + + IP+GV+ Sbjct: 61 PVHLQYVDYMRGVVVGNLGTSFQLRQPVSTLIGERMWTTFYISFVSLFISLMIAIPIGVI 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ SIFD+ AL G S+PIF++ ++LI + P+SG Sbjct: 121 SATKQYSIFDYAGTIFALMGVSIPIFFFALLLIKQFGIDLRWFPISG------------- 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 M A + N D + H +LP VLG +R TRSSMLEV+ +DYIRTA Sbjct: 168 ----MRTPAADFSFPHNMFDLLKHSVLPLTVLGLTQAGRFMRYTRSSMLEVIRQDYIRTA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVT++G + L +GA+L E +F WPG+GR +++ Sbjct: 224 RAKGLNEKVVIYKHALRNALIPVVTLLGASLPILFSGALLIEIVFVWPGMGRLQYNSVLH 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L + + ++ NL+ D+ Y ++PRIR+ Sbjct: 284 RDYPLMMGINLFLGVLTLMGNLVADISYAFIDPRIRYD 321 >UniRef50_D1CA61 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA61_SPHTD Length = 311 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 124/335 (37%), Positives = 193/335 (57%), Gaps = 27/335 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+LRRL ++P G+T + F +H++PGDP IM G R +PE AQL LGLD+ Sbjct: 1 MSRFVLRRLIQMVPVVFGLTAVIFFMIHLVPGDPAAIMLGTRA-TPENVAQLRRNLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ + G LG S+ R PV + + TL L ++ A + +P+ L Sbjct: 60 PLLVQYMFFLRNLATGSLGDSIFYREPVLDLILDHLPTTLMLATSTIMLAVIITVPLATL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ R + D G L G +MP FW G+ L++L++V + + P G Sbjct: 120 AALHRDRLADQVVRGFLLVGLAMPSFWVGINLLLLLTVRYRIFPAGG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +G+ F D + H+ LPA+ + AV+VR RSS+++ L D++RTA Sbjct: 167 -----------FGD--GFFDHLRHLFLPALTIALSISAVLVRNLRSSLIDTLTADHVRTA 213 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V H LRN+ + VT++GL +G L+ G ++ E +F+ PGLG+ L+ ++ Sbjct: 214 RAKGLSSRAVFFWHVLRNSAMSTVTILGLNLGYLMGGTVIIEQVFALPGLGQLLLTSIFG 273 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYPVVQG L+ A ++ILVNL+ DL+Y ++PR+ Sbjct: 274 RDYPVVQGITLVYAVLVILVNLITDLVYAALDPRV 308 >UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2F3_DEIDV Length = 314 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 138/338 (40%), Positives = 206/338 (60%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL +PT + +TL+ FA V+++PGDP ++ GE +PE A+L LGLD+ Sbjct: 1 MLVFALRRLLSTLPTLLIVTLVVFAMVNLLPGDPARLLLGEEA-TPEALAELRRSLGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QYL ++ V+ D G S+K V + T++L +M+ A + IP G+L Sbjct: 60 PLPEQYLRWLMDVIQLDFGTSVKDNTTVTSLVAEKLPTTMQLAGFSMLIALVIAIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A++RG+ D +AL+G S+P F+ G++LI + S+ P SG VS F +D Sbjct: 120 GALRRGTWVDQVLTLMALSGISLPNFFLGILLIYVFSIRLAWIPASGYVS---FFEDP-- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G++ + ++LPA+ LG AV+ R R S++E L +DY+RTA Sbjct: 175 ------------GKN------LLLLLLPAVTLGVHSAAVLARYLRGSLIETLFQDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ RV HALRNA++PVVT GLQ+G LL GA++TE IFS PG GR L+DA+ Sbjct: 217 HAKGVSGPRVTFKHALRNALIPVVTAFGLQLGGLLGGAVITEQIFSVPGFGRLLVDAVFT 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QG VL+ A + +V+ LVD++Y ++PRIR++ Sbjct: 277 RDLPVIQGVVLVSAIAVFIVSFLVDMMYAALDPRIRYQ 314 >UniRef50_B6JJN3 Dipeptide transport system permease protein DppB n=3 Tax=Proteobacteria RepID=B6JJN3_OLICO Length = 317 Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 141/341 (41%), Positives = 205/341 (60%), Gaps = 27/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV---MIMAGERGISPERHAQLLAELG 57 ML++ +RR L+IPT G+ +L F + +PGD V M+M G + ++PE A LG Sbjct: 1 MLRYTIRRFLLMIPTLFGVAVLVFIMLRAMPGDIVEMRMLMDGGQ-VTPEALIVERARLG 59 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+P+W Q+ +I G+M GD G SM + PV +E R +LE+ + A I A + IP+ Sbjct: 60 LDQPLWYQFYDWITGIMVGDFGTSMWTGRPVIDEISSRLGLSLEVAILATILAILISIPL 119 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G ++A+ + DH A+ G ++P FW GM++I+ + + +N P Sbjct: 120 GTISALYNNTWIDHVIRTFAIAGLAIPSFWLGMLIILGLLLTFNWIP------------- 166 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 PLT T IW ED I ++ +I PA+ +G AV RMTRS++LEVL EDYI Sbjct: 167 --PLTY-----TPIW-EDP--ITNLSQLIWPALAVGYRYSAVATRMTRSTLLEVLQEDYI 216 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTARAKG+ V+ HA+RNAMLPVVTVIGL+ L+ G ++TE +F+ G+G+ ++ Sbjct: 217 RTARAKGVYERLVLSRHAIRNAMLPVVTVIGLEFAFLIGGLVVTEQVFNLNGIGKLFVET 276 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + R DY +VQ V+LVA I VN +VDLLY V++PRIR+ Sbjct: 277 VTRADYTMVQALVMLVAAFFIAVNFVVDLLYAVLDPRIRYS 317 >UniRef50_D1VVB3 Dipeptide ABC transporter, permease protein DppB n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVB3_9FIRM Length = 307 Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 135/338 (39%), Positives = 211/338 (62%), Gaps = 35/338 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLL-AELGLD 59 M ++IL+R+ ++IPT IG++ + F+ +++ PGD + AG +P+ ++L ++GL+ Sbjct: 1 MPKYILKRILILIPTIIGVSFVVFSLLYLSPGDAALASAGPN--APKETVEILRNKMGLN 58 Query: 60 KPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P QY ++ + H DLG S +S+ PV E+ + F TL+L ++IFA GI +G Sbjct: 59 DPFLIQYGRFLKNLIFHFDLGTSYQSKTPVIEKILRVFPNTLKLAGVSLIFAIISGIILG 118 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 ++A + + +I D + G +MPIFW G++LI++ S L P SG S Sbjct: 119 IIAGINKNNIIDSIISFAGMIGLAMPIFWSGLLLIIIFSSKLKLLPASGFSS-------- 170 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 W HMILP + LG + I+RMTRSSM+EVL +DYIR Sbjct: 171 -------------W----------RHMILPVLALGLQTSSSIMRMTRSSMIEVLDKDYIR 207 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL + R+I +HAL+NAM+P++T IGLQ G LL G+ILTET+FS G+GR ++D++ Sbjct: 208 TARAKGLKKSRIIFIHALKNAMIPIITTIGLQAGGLLGGSILTETVFSISGIGRLMVDSV 267 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + RDYPV+ GGV+ +A + +++++VD+LYG +NP+I+ Sbjct: 268 KTRDYPVILGGVMFIALVYSIISIIVDILYGFLNPQIK 305 >UniRef50_C7P3N9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=C7P3N9_HALMD Length = 332 Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 125/342 (36%), Positives = 205/342 (59%), Gaps = 17/342 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH--AQLLAELGL 58 ++++ +RRL IP +G+ +TFA + IPGDPV IM G SP + A + A GL Sbjct: 3 LVRYTVRRLLQAIPVLLGVVTITFALANAIPGDPVQIMLGP---SPSQSEIAAIRARYGL 59 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+W +Y +Y+ ++ GDLG S+ + V + R AT+ L + + FA +P+G Sbjct: 60 DQPLWVRYANYVAALLAGDLGTSIYYDVAVTRKIGERLPATVLLMLSSYAFAILTAVPLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V++A +R + DH + ++L G S P FW G+MLI++ H NL P + V M + D + Sbjct: 120 VISAKRRNRLTDHVSRIVSLIGVSTPSFWIGLMLILVFGFHTNLLPTTNLV--MPWADPA 177 Query: 179 NPLTGFMLIDT-AIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +D A+ G+ H++LP I LGT+ +A I R+ RS ML+VL E+Y+ Sbjct: 178 GIRGAETRLDVLAMAGQ---------HLLLPMITLGTLQMAAITRIERSEMLDVLTEEYV 228 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 ARA G++ ++ HA RNA LPV+T+IGLQ+ + + GA+LTE +F G+GR ++D+ Sbjct: 229 TLARAYGISERTILRKHAFRNAQLPVITIIGLQLSSAIGGAVLTEVVFEINGMGRLIVDS 288 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + R+DYP++ G ++ A + ++ ++ DL Y V+PR+ + + Sbjct: 289 IARQDYPLIMGTTIVFAFVFVVGVVVTDLSYAYVDPRVSYGE 330 >UniRef50_A8F6T0 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=A8F6T0_THELT Length = 328 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 127/340 (37%), Positives = 193/340 (56%), Gaps = 22/340 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI--MAGERGI--SPERHAQLLAEL 56 M +++ RL +IP F I+L+ F ++ +PGDP++ + R + P + A+L Sbjct: 1 MKRYLFFRLLELIPIFFLISLIIFVILNAMPGDPLLTSRLENPRALVRDPAKIAELRKYY 60 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 LD P+ +Y ++ + GDLG S + PV V R TL L + A + V P Sbjct: 61 HLDDPLIVRYGFWLTSFLKGDLGFSSMYKQPVLGIIVKRLPNTLTLTITAWVIGLIVAFP 120 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G+ +AVK+ S FD+ LA G S+P FW+ +M I++ SV P+SG + Sbjct: 121 IGIYSAVKKYSFFDYFFTILAFVGISLPTFWFALMAIIVFSVVLGWFPISGVQT------ 174 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 I G F+D + H+ LPA+VLG + +A VR R+S+LEVL +DY Sbjct: 175 ------------YGITGSWNIFVDKLRHLTLPALVLGLVQVAYWVRYIRTSLLEVLDQDY 222 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTA +KG RVI+ HALRNAM+P++T+I L + GA++ ET+FSWPG+GR + + Sbjct: 223 IRTAYSKGAKEKRVILKHALRNAMIPIITIIALDIPYFFGGALIVETVFSWPGMGRLMYE 282 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 A+ DY + ++ +A + +L NLL D+LY VV+PRIR Sbjct: 283 AILASDYNLAVNCLMFIAVITLLSNLLADILYAVVDPRIR 322 >UniRef50_C8WR99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WR99_ALIAD Length = 320 Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 130/335 (38%), Positives = 190/335 (56%), Gaps = 21/335 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RR+ IP+ IGI+++TF +H++PG+PV I+ G+ +P+R A L LGL+K Sbjct: 1 MLSYIVRRILQAIPSLIGISIITFILLHIVPGNPVRILLGQH-YTPQRAAALAQSLGLNK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL ++W ++HG+LG S PV TL L + A IFA + +G + Sbjct: 60 PLYMQYLIWLWNILHGNLGYSYNYTEPVTYLIGHALPNTLSLVLIATIFAQLFAMLIGTV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +I DH L YSMP FW G++++M S+ + P G V+ D NP Sbjct: 120 QAYFENTIADHIITVLNYFFYSMPSFWLGILMVMFFSIQLHWFPSGGVVNP----QDPNP 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ILPA L + LA R RSS+ E L DY+RTA Sbjct: 176 ----------------GFWDWLHHLILPAATLTLVTLAGYSRYMRSSVRETLLMDYVRTA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +V+ H LRN++LP +T+ GL L AGA+ E IF++PG+G +A+ Sbjct: 220 RAKGLRESQVLWRHVLRNSILPQITLFGLSFPALFAGALFIEEIFNYPGMGLLYWNAVGT 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DYPV+ G + + + I+ NLL D+LY +V+PRI Sbjct: 280 LDYPVLLGVTMFLGALTIIGNLLADILYSLVDPRI 314 >UniRef50_C6AV34 Binding-protein-dependent transport systems inner membrane component n=66 Tax=Proteobacteria RepID=C6AV34_RHILS Length = 360 Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 192/312 (61%), Gaps = 2/312 (0%) Query: 15 TFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVM 74 T G+ L+TF + P DP + + G+ S + ELGLD+P+ Q+L Y+ + Sbjct: 40 TLFGLALVTFTMTRLSPIDPALQLVGDHA-SQSTYEAARVELGLDQPLPVQFLRYLETAL 98 Query: 75 HGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAV 134 G+ G S+ + PV ++ F AT+EL A+I A+G+ +G+ AA+++G+ D A Sbjct: 99 SGNFGQSISTGQPVAKDIARTFPATIELATAAIILGAAIGLALGIAAAMRQGTWVDSAAR 158 Query: 135 GLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGE 194 ++L GYS+PIFW G+++++L + P GR +D+VF P++GF LIDT + G+ Sbjct: 159 FVSLFGYSVPIFWLGLLMLLLFYARLHWAPGPGR-ADVVFQYTVKPISGFALIDTWMSGK 217 Query: 195 DGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVH 254 G F DA+AH+ LPAIVL LA I R+TR+++L LG++Y+ TARAKG + R+ +H Sbjct: 218 TGAFRDALAHLALPAIVLAFHALAAISRLTRAAILTELGQEYVTTARAKGASLSRITFIH 277 Query: 255 ALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVA 314 + N ++TVI L +LL GA+LTET+F+WPG+GR+L A+ D P + G L+V Sbjct: 278 IMPNIAGTLLTVIALSYASLLEGAVLTETVFAWPGIGRYLTTAMFAGDMPAILGATLVVG 337 Query: 315 TMIILVNLLVDL 326 +L+N L DL Sbjct: 338 ASFVLLNALTDL 349 >UniRef50_C5BVI8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVI8_BEUC1 Length = 361 Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/335 (39%), Positives = 196/335 (58%), Gaps = 3/335 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKP 61 +F+LRRL + + +G+T +TF V ++PGD + E ++ PE A A+ GLD+P Sbjct: 27 RFLLRRLVITVFLLLGVTAVTFLLVQLVPGDSMTATLSETALADPEVVAAYRAKWGLDEP 86 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY Y+ ++ GDLG+S ++ PV + + ATLE+ + AM+ + +G VG+ A Sbjct: 87 LLTQYGIYLSNLLQGDLGVSTQTGRPVLGDLLTYVPATLEIALPAMVLSVVIGTAVGLYA 146 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV++G D L G S P FW ++ + + + P GR+S +L + Sbjct: 147 AVRQGRAGDQVVRVGTLLGLSTPPFWLSLVALYVFFYLLGVAPSGGRLS--TYLSPPPRV 204 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG +D + G+ + DAV H++LP VL + +A +VR RS+MLEVL +DYI AR Sbjct: 205 TGMFTLDALLAGQWMVWWDAVQHLVLPVAVLTCLTVATLVRFVRSAMLEVLDQDYIAAAR 264 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ H LR ++PV+TV GL LL+G +L E IFSWPG+G++ A Sbjct: 265 AKGLPTSVVLRRHVLRAGLVPVITVSGLAFAALLSGTVLVEQIFSWPGVGQYAYRAASGL 324 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P V G L VA + +VNL+VDLLYGV++PRIR Sbjct: 325 DLPAVIGVGLFVAVVYTIVNLVVDLLYGVIDPRIR 359 >UniRef50_Q211A7 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Rhodopseudomonas palustris RepID=Q211A7_RHOPB Length = 340 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 130/326 (39%), Positives = 192/326 (58%), Gaps = 24/326 (7%) Query: 11 LVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH-AQLLAELGLDKPMWQQYLHY 69 LVI TF F VH PGDP ++AG+ G + + AQL AE GLDKP Q Y Sbjct: 32 LVIATF------NFVLVHAAPGDPAQVIAGQSGSADAKLLAQLRAEYGLDKPYPVQLATY 85 Query: 70 IWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIF 129 + ++ DLG S + + V R ATL L A A A G+ +G LA ++ G Sbjct: 86 LKRIVTLDLGYSYRQQRSVLSLLGERLPATLLLTCTAFFLALAAGVLLGTLAGMRAGKWS 145 Query: 130 DHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDT 189 D ++L Y+MP+FW G+ML++L SV + P G V+ V +T F Sbjct: 146 DTALTIVSLLLYAMPVFWLGLMLVLLFSVKLDWLPAFGYVTIGV------EMTAF----- 194 Query: 190 AIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMR 249 D +H++LPA+ L + +A+ R+ RSS++E+ +D+I+TARAKGL + R Sbjct: 195 ------ERMRDVASHLVLPAVSLAAVHMAIYARLMRSSVIELAHQDFIKTARAKGLKQGR 248 Query: 250 VIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGG 309 ++ H LRNA+LPVVTV G+Q G L+ GA++ ET+F+WPGLGR DA+ +RDYPV+ G Sbjct: 249 IVAHHILRNAILPVVTVAGMQAGALVGGAVVIETVFAWPGLGRLTYDAVLQRDYPVMLGI 308 Query: 310 VLLVATMIILVNLLVDLLYGVVNPRI 335 L+++ ++IL+NL+ D +Y +V+PR+ Sbjct: 309 FLMMSVIVILLNLVTDAIYRLVDPRV 334 >UniRef50_B2JY51 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Burkholderia phymatum STM815 RepID=B2JY51_BURP8 Length = 356 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 132/324 (40%), Positives = 192/324 (59%), Gaps = 6/324 (1%) Query: 15 TFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVM 74 TF+G+ LTF +P DPV+ + G+R + A+ LA LGLDKP+ Q+ Y + Sbjct: 37 TFLGLLALTFVIGRELPMDPVLAVLGDRAPAAAYAAERLA-LGLDKPLVTQFAIYARDAL 95 Query: 75 HGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAV 134 HG+ G+S+ + PV ++ F ATLEL A + +G+P+GV AA + DH A Sbjct: 96 HGNFGVSLLTSNPVLDDIRRVFPATLELATLATLIGLVIGVPLGVAAAARHNKPIDHFAR 155 Query: 135 GLALTGYSMPIFWWGMM--LIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW 192 + L G S+P+FW G+M L+ +HW P GR+ D + + TG +L+D A+ Sbjct: 156 FVGLIGNSVPVFWLGLMGLLLFYARLHWVAGP--GRL-DPAYDGMVDSHTGSLLLDAALA 212 Query: 193 GEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVII 252 GE +A++H++LPA +LG +A + RMTRS MLE L ++Y+ TARAKGL VI Sbjct: 213 GEWDVLRNALSHIVLPAAILGYYSVAYLSRMTRSFMLEQLSQEYVVTARAKGLPERLVIW 272 Query: 253 VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLL 312 HA N ++P++TVI L LL G++LTE +F+WPGLG +L +AL D V G L+ Sbjct: 273 RHAFGNIVVPLLTVIALTYSNLLEGSVLTEIVFAWPGLGSYLTNALLNADMNAVLGATLV 332 Query: 313 VATMIILVNLLVDLLYGVVNPRIR 336 + M I +NLL D LY + +PR R Sbjct: 333 IGVMFITLNLLTDALYRLFDPRTR 356 >UniRef50_B3TCI4 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCI4_9ZZZZ Length = 321 Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 131/338 (38%), Positives = 198/338 (58%), Gaps = 35/338 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHA----QLLAELGL 58 +++ RR+ ++P ++ I+LL F + PGDP + E P +L ELGL Sbjct: 5 RYLARRVLYLVPVWLAISLLAFGLGALAPGDPAEAIYFETFGEPPNDELALEKLREELGL 64 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + P+ +Y +++ + GDLG S +S +PV + +TL L + +I A+ + P+G Sbjct: 65 NDPLPIRYGRWLFDAVRGDLGESYRSGMPVLPALISPLGSTLILALGGLIAASMIAFPLG 124 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAAVK S+ D A +L G ++P +W M I++ +V+ + PV+G S Sbjct: 125 ILAAVKHNSLIDVVARFFSLIGAAIPSYWLAYMFILVFAVYLHWLPVAGAGS-------- 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 W H+ILP LG A++ R+ RSSMLEVLG DYIR Sbjct: 177 -------------W----------RHLILPCFTLGLSGAALLSRLLRSSMLEVLGYDYIR 213 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL+ +VI+ HALRNA++PVVTV+G G LL+GAI+ ET+F+ PGLGR +I+A+ Sbjct: 214 TARAKGLSERKVILQHALRNALIPVVTVMGNMFGLLLSGAIIVETVFARPGLGRLIIEAI 273 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+QG VL T+ +LV+L++DL Y ++P++R Sbjct: 274 SFRDYPVIQGFVLFTGTVFVLVSLIIDLSYTWIDPQVR 311 >UniRef50_A4F975 ABC-transport protein, membrane component n=2 Tax=Actinomycetales RepID=A4F975_SACEN Length = 319 Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 191/319 (59%), Gaps = 32/319 (10%) Query: 24 FAFVHMIPGDPVMIMAG----ERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLG 79 FA + +PGDP + +AG + I RH+ GLD+P+ QY ++ + GD G Sbjct: 25 FAGLRALPGDPAVALAGPEADDAAIEQIRHSY-----GLDQPLPVQYATWLGRAVRGDFG 79 Query: 80 ISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALT 139 S + +P+ E + R TLEL V +++FA VG+ GV++AV+RG D GL+L Sbjct: 80 ESATTGLPIGEIILGRIPVTLELAVLSLLFAALVGLAAGVVSAVRRGGPLDWLGNGLSLF 139 Query: 140 GYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFI 199 G S+P FW G+M +++ +V + P SG F+ + W Sbjct: 140 GLSIPNFWLGLMCVLVFAVWLGVLPASG----------------FVPFTESPW------- 176 Query: 200 DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNA 259 + + M+LPA VLG+ AV++R RSSML+ LG DY+RTARAKG RV+ VH LRN+ Sbjct: 177 ENLERMVLPAFVLGSGLAAVLMRQMRSSMLDSLGSDYVRTARAKGAGEWRVVGVHGLRNS 236 Query: 260 MLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIIL 319 ++ V+T++GLQ+G L++GA++TE IF PG G+ ++D++ RD+PV+Q VL+ A I Sbjct: 237 LITVMTILGLQLGALISGAVVTEQIFVLPGFGKLMVDSVFTRDFPVIQAAVLVTAAGYIA 296 Query: 320 VNLLVDLLYGVVNPRIRHK 338 VNL VDLLY VV+PRIR + Sbjct: 297 VNLAVDLLYSVVDPRIRVR 315 >UniRef50_A1WJE8 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Proteobacteria RepID=A1WJE8_VEREI Length = 315 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 128/336 (38%), Positives = 198/336 (58%), Gaps = 24/336 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +I RRL +P + + ++ FA + + PGDP I+AG+ + ++ +GLDK Sbjct: 4 LSYIGRRLLATLPVMLMVAVVVFAMLRLTPGDPAAILAGDDATGAQLE-KVRQTMGLDKS 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ +M GDLG+S+ S PV + R TL L +C + V +P+GV+A Sbjct: 63 IPAQFASWMGQLMRGDLGVSLLSGTPVRQMIGIRMGPTLALALCTIALTIMVALPLGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +RG D + L+ G+S+P F +LI L S+ PV G PL Sbjct: 123 ASQRGRWLDRLVMTLSALGFSVPTFVVAYLLIYLFSMKMGWFPVQG----------YKPL 172 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 IW ++LPA+ L I +A++ R+TRSS+LEV+GED+IRT R Sbjct: 173 A------EGIW-------PFAQRLVLPALALSGIYIALVARITRSSILEVMGEDFIRTVR 219 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG +++ HALRNA + +VT+IG+ V +L+ G ++TE++F+ PGLGR +++A+ R Sbjct: 220 AKGAKDSTILLRHALRNAAVSIVTIIGIGVASLITGVVVTESVFNLPGLGRLVVEAVLAR 279 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+QG +LL + IL+NLLVD+LY V++PRIR+ Sbjct: 280 DYPVIQGLILLFSFSYILINLLVDVLYTVLDPRIRY 315 >UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9ADY0_RHIRD Length = 324 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/339 (38%), Positives = 194/339 (57%), Gaps = 24/339 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDK 60 L + R+L + + L F+ ++++PGDPV+++ G + SPE A + A+LGLD+ Sbjct: 8 LLLVARKLLTAFIQLLVVATLIFSVMYIMPGDPVLLLLGADSNPSPEAIASMRAQLGLDQ 67 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ +H D G S+ + PV + TLEL A+I A +G+P+G+ Sbjct: 68 PVISQYFVWLRNALHLDFGKSLTNGYPVANYVMQNLPRTLELAFAAIIIAALIGVPIGIA 127 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRGS D +A G S+P++ G +L++ SV P SG + D S Sbjct: 128 AALKRGSTRDTVLTSIATIGISVPVYIVGTLLVLFFSVKLGWLPASG------YTDISR- 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 N ++ + LPA LG A I RMTRSS+LE+LG D++R Sbjct: 181 ----------------NVLEHFRKLALPAFALGFGLAASIARMTRSSVLEILGRDFVRAL 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R+I H RNA +P VT+IGLQ+G L+ G +L E +F+WPGL L+ A+ Sbjct: 225 RAKGMPERRIIWQHVFRNAAIPNVTIIGLQLGNLMGGTVLVEAMFNWPGLSTLLVGAVSA 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R+YP+VQG +L +A IL+NL+V+LLY +++PRIR K Sbjct: 285 RNYPLVQGSMLAIAAAFILINLIVELLYSLLDPRIRRKS 323 >UniRef50_Q2YJK1 Putative peptide transport system permease protein BAB2_1050 n=36 Tax=Proteobacteria RepID=Y1050_BRUA2 Length = 314 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/338 (38%), Positives = 194/338 (57%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M IL+R+ IP + + +LTF + ++PGDP +++AG+ G SPE ++ ELGLD+ Sbjct: 1 MTALILKRVAQAIPVMLIVAILTFLLMKLLPGDPAILIAGD-GASPETVERIRVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q ++W + H DLG S PV + R T+ L + A VGI +GV+ Sbjct: 60 PTVVQLGQWLWNLFHFDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA R S FD + LAL G S+P FW ++ ++L SV P +G V FLD +P Sbjct: 120 AAYLRDSWFDTGVMSLALLGVSVPSFWLAILAVILFSVTLGWFPSAGYVP---FLD--SP 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L W + +ILPA +L + + RMTRS MLEV+ +DYIRTA Sbjct: 175 LG---------W---------LRSLILPASILALFQIGYLARMTRSEMLEVMDQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ V+ HA RNA++ V+TV G L+ G+++ E IF+ PGLGR L+ A+ Sbjct: 217 RSKGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQAILA 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQG +L + + + +N+LVD+LY + +PR+R+ Sbjct: 277 RDLPVVQGTMLFLGFLFVAINVLVDILYTIADPRVRYD 314 >UniRef50_UPI0001C354AE putative ABC-transporter permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C354AE Length = 328 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/338 (36%), Positives = 194/338 (57%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL+RLG+ + +++++F VHM+PGDP ++ G S + A + LD+ Sbjct: 13 MGRYILKRLGISVAVIFLVSVISFTLVHMLPGDPAVLALGSEA-SEQDIATFREKYYLDR 71 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY +I + GDLG S+ PV R T+ +G+ A+I ++ +GI G++ Sbjct: 72 PIVEQYFIWITDTLRGDLGDSITYSRPVLTCLAERLPRTISIGLPALILSSILGILCGII 131 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++RG D+ ++ G P FW G++ I + + P+SG VS Sbjct: 132 SAIRRGKFIDNLITFVSTIGLGAPQFWLGIVGIYIFGMKLGWLPLSGYVSP--------- 182 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GE NF + + ++P ++L LA + R TRS+MLEV+ +DYIRTA Sbjct: 183 ------------GE--NFGQYIYYGVMPILILSFSLLASVARQTRSNMLEVVNQDYIRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL VI HAL+NA++PV+T IGLQV ++ G+++ E +F+ G+G ++ A+ Sbjct: 229 RANGLAEKSVIYKHALKNALIPVITTIGLQVRVVVGGSLMVEQVFNIAGIGTLIVSAING 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY VVQG V +++ +LVN L+DLLYG V+PRIR Sbjct: 289 RDYMVVQGCVFVISVFTVLVNFLIDLLYGFVDPRIRKS 326 >UniRef50_Q15RH3 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Alteromonadales RepID=Q15RH3_PSEA6 Length = 343 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 207/342 (60%), Gaps = 6/342 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ ILR + L+I T ++ +F+ ++ PGDP++ + G R S + +A L + + Sbjct: 1 MLKIILRHVSLLILTLFILSFFSFSLAYLFPGDPLVNLTGIRDSSEQGYAILAQQYAMQD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 QY Y+ + G+ G+S S +P+ EE A++EL A+I + VG+P+G L Sbjct: 61 SFLSQYWQYVNHLFSGNWGLSFSSGLPLAEEISRSLAASVELSAYALIVSFVVGLPLGFL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A ++ + D + ++ GYS+P+FW ++ I++ S+ P+SGR+S L D Sbjct: 121 AGLRHHKLTDFALLTTSVIGYSIPVFWAALIAILIFSIQLGWFPLSGRIS---LLYDVPY 177 Query: 181 LTGFMLID---TAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 TGF+LID + + ++ F DA+ H++LP++ + + +++R+TR S++EV+ +YI Sbjct: 178 QTGFILIDILLSDLPDKEFAFKDALRHLVLPSVSIAIVTCTIVMRITRRSVVEVMSSEYI 237 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 + A A+GL+ +V + H ++NA++P++ ++ +Q TLL A++ ETIFSWPG+G LI A Sbjct: 238 QAAYARGLSPRQVFLRHGVKNALIPILPLLVMQFTTLLTNAMIVETIFSWPGIGNGLIQA 297 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + +RD+P ++ G+L V+ +++ + +D++ + +P R + Sbjct: 298 IYQRDFPAIRAGMLAVSALVLTFTITIDMVIQIFDPAGRRPE 339 >UniRef50_D1CFB1 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFB1_THET1 Length = 311 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/337 (37%), Positives = 194/337 (57%), Gaps = 29/337 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FI RRL + +T +TF H+ PGDP++I+ G P +A+L E GLDK Sbjct: 1 MGSFIARRLLSALFVLFSLTFITFMVGHLAPGDPILILMGPHQ-DPTTYARLRHEYGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+W QYL YIWG++HGDLG+S + VW+ + +G ++ +GIP+GV Sbjct: 60 PLWAQYLSYIWGLLHGDLGLSYRYEGRSVWDLIKSGVPVSFRVGGLGLVLGLMIGIPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K S+ D + V L L Y++P F +L+ + W + + F++ + Sbjct: 120 IAAIKHNSVVDRSIVFLTLAFYAVPSF-------VLIPIAWEI---------IRFMNSA- 162 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G + A WG H +LP ++L + I R+TR+SMLEVL +DY+RT Sbjct: 163 ---GLPTLPVAGWG-------TWQHYVLPVVILAAANIGYITRLTRNSMLEVLTQDYVRT 212 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR+KGL R VI HA RNAMLP+VTVIG V L+ GA + E + + PG+ + ++Q Sbjct: 213 ARSKGLPRRLVIWRHAFRNAMLPLVTVIGPSVAFLITGAFVVENLLNVPGIAFLTVQSIQ 272 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +RDY V+QG +L+ ++++NLL D+ Y +++PRIR Sbjct: 273 QRDYAVIQGTTILLGVAVVIMNLLTDMAYMILDPRIR 309 >UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteobacteria RepID=A8IB88_AZOC5 Length = 335 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 127/342 (37%), Positives = 198/342 (57%), Gaps = 31/342 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ +P +G++L+ FA +H+ PGDP+ + E G SPE AQ+ A G D+ Sbjct: 19 MLVYVLRRILYTVPIALGVSLVCFALIHLAPGDPLSAIIPE-GASPETVAQVRAAYGFDR 77 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ V+ GD G S+ ++ PV E +P TL L A++F A G +GV+ Sbjct: 78 PLPVQYLKWLQHVVMGDFGNSIMTQRPVMAEVLPALANTLMLAAAAVLFGFAAGCLLGVV 137 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + G D +++TG S+P +W GM+L+++ +V NL P +G Sbjct: 138 SGYLAGKPTDKAVTAVSITGVSIPHYWLGMVLMVIFAVELNLLPATG------------- 184 Query: 181 LTGFMLIDTAIWGEDGNFI-----DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 GE G+ D++ ++ILPA+ L IP +I R R ++ EV +D Sbjct: 185 -----------MGEGGSGAFGFGWDSLQYLILPALTLSVIPAGIIARSVRGTIAEVRKQD 233 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 +++T AKGL R I VH ++NA+ V+ V+GLQ+ LL G+IL ET+FSWPG G L Sbjct: 234 FMQTLHAKGLPGRR-IFVHVVKNALPAVLAVMGLQLAQLLGGSILVETVFSWPGTGFLLN 292 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +A+ RD PV+QG +L++A +L+NL VD++ V+PRI+ Sbjct: 293 NAIFTRDLPVLQGTILVLAMFFVLINLAVDVVQTAVDPRIKR 334 >UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECM8_9ACTN Length = 345 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/354 (37%), Positives = 212/354 (59%), Gaps = 35/354 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQL-------- 52 M ++I++R+ IP F+G+TL+ FA +++PGDP+ ++ G++ +SPE QL Sbjct: 1 MGKYIVKRVLQFIPVFLGVTLILFALQNIVPGDPIKLIGGDKALSPEVELQLRVRYHLVQ 60 Query: 53 --------LAELG--LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL 102 L E G + + +YL+Y+ G++HGDLG S + ++PV E F ++ T++L Sbjct: 61 TDDDGNAILDENGDPVQTSLVDRYLYYMNGLLHGDLGNSYQRKLPVTEIFAQKYPYTVKL 120 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 CA++ +GI G+++AVKR S +D ++P FW GM+L + V L Sbjct: 121 AACAIVLEAIMGIGAGIISAVKRYSFWDILVTLTTSILVAVPAFWLGMLLQLFFGVI--L 178 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 +G M P++G G + D + H +LP I L ++ A R Sbjct: 179 KDATGGAISM-------PISG-------AGGSSSQYQDWM-HYVLPTITLASVSTAYAAR 223 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 + RS +L+V+ +DYIRTA+AKGL+ +I+ HAL+NA++PVVT IG+ G +L+GAILTE Sbjct: 224 IMRSQLLDVMNQDYIRTAKAKGLSNRAIIVKHALKNALIPVVTYIGVDFGGMLSGAILTE 283 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 T+F+WPG+G + A+ RD+P+V GGV L+ +++++NLLVD+ Y ++PRIR Sbjct: 284 TVFNWPGIGYEVYRAISMRDWPIVMGGVTLIVVVVMVINLLVDISYAFLDPRIR 337 >UniRef50_Q2CJD0 Putative dipeptide transport system permease protein 1 n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJD0_9RHOB Length = 321 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 194/323 (60%), Gaps = 18/323 (5%) Query: 14 PTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGV 73 P + I ++ FA +H+ PGD +++AGE G PE + GLD+P+ +Q Y+ + Sbjct: 16 PIALFIVVINFALIHLAPGDVSILLAGE-GADPEYMQSIRESYGLDRPLHEQLGAYLGQI 74 Query: 74 MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTA 133 + GDLG+S ++R PV + R ATL L A++ A+ G+ +G + A + GS D Sbjct: 75 LQGDLGLSFRTREPVIDIIAERIPATLLLAGTALVLASIAGVAIGAVMARRPGSALDTAV 134 Query: 134 VGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWG 193 L+++ +S+P+FW G+MLI+L +V P SG VS + P G Sbjct: 135 TTLSISLFSIPVFWLGLMLILLFAVTLRWLPSSGMVSI------AGPREGL--------- 179 Query: 194 EDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIV 253 G +D V HMILP L + L VR++R+S+ E L E Y+ TARA G RV+ Sbjct: 180 --GFVLDVVRHMILPVTALAAVWLGQYVRLSRASVSETLAEPYVTTARAIGFPERRVMTR 237 Query: 254 HALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLV 313 ALRNAMLP+VTV+GL++G LL+GA+LTET+FSWPGLGR + +A+ RD PV+ G L++ Sbjct: 238 FALRNAMLPIVTVLGLELGLLLSGAVLTETVFSWPGLGRLIYEAILSRDTPVIMGAFLIM 297 Query: 314 ATMIILVNLLVDLLYGVVNPRIR 336 + ++L LL DLLY ++PR+R Sbjct: 298 SFTVMLAALLTDLLYAALDPRVR 320 >UniRef50_B9ZIB5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIB5_NATMA Length = 325 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 123/337 (36%), Positives = 197/337 (58%), Gaps = 15/337 (4%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRR G ++ T I + FA M+PGDP + + E+ + P++ L+ + GLD P Sbjct: 4 VNYALRRTGQLVLTIWAIATMLFAMFRMMPGDPTVFLVDEQ-MDPDQRQALIEQYGLDAP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QY+ ++ ++ DLG+S SR PV + TL L + A++ A G+ GV+A Sbjct: 63 LHEQYIEFMIQIVTLDLGLSFHSRRPVRDVIAIYLPNTLILMLTALVLAYIFGVTFGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RGS + V LAL S P FW G++++ + + ++ P+SG S + P Sbjct: 123 AWARGSGREKLLVVLALVQRSFPSFWVGLVVLWIFGAYMDVIPMSGMTSR-----EHRPE 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + FM+I + ID + H+I PA VL + + + R++MLEVL ED+I R Sbjct: 178 SFFMMITS---------IDFLWHLIAPASVLAFYSMGYPLLLMRNNMLEVLTEDFIDVCR 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +V+ HA RNA+LPVVT + VG + G++L ET+F WPG+GR +++A+ RR Sbjct: 229 AKGLSERKVMFKHAARNALLPVVTAGAVAVGYAVGGSVLIETVFGWPGIGREMVNAVLRR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV QG +L+A+ ++ +N DLLY ++PR+ + Sbjct: 289 DYPVAQGTFILLASTVVFMNFFADLLYSWLDPRVTYD 325 >UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8I3_9FIRM Length = 327 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 128/339 (37%), Positives = 200/339 (58%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV--MIMAGERGISPERHAQLLAELGL 58 M+++I +RL +IP I+++ F V +PGDPV + AG R ++ + + E GL Sbjct: 1 MVKYIFKRLINLIPVVFIISVVIFGTVKAMPGDPVNAYLGAGSRATEAQKDS-IRREWGL 59 Query: 59 DKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 D+P+ +QY+ ++ V GDLG S K + PV + T L V A+I A+ IP+ Sbjct: 60 DRPLPEQYVTWVKNMVTKGDLGQSTKFKQPVADIIGEYVWNTFLLNVVALIIGIALSIPI 119 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G+ AVK+ S FD+ +L G S+P F++ ++L+ +++ PVSG D Sbjct: 120 GIRQAVKKFSKFDNFWTVFSLLGVSVPTFFFALLLVFYIAIPTGALPVSG------MRDA 173 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 S L G+ I I D HMILP VL A R RS+M++V+ +DY+ Sbjct: 174 SMALIGYDNIFQEI-------ADVAVHMILPVTVLAFSNFATFSRYVRSAMIDVINQDYV 226 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTARAKGL VI HA +NAM+P+VT++GL + +L +GA++ E++F+WPGLG+ L+DA Sbjct: 227 RTARAKGLKEKVVIYRHAFKNAMIPLVTLLGLYIPSLFSGAMILESVFAWPGLGKILVDA 286 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + +D ++Q +L A +++L NLL D+LY VV+PR++ Sbjct: 287 ITNQDQAIMQACLLFSAILMVLGNLLSDVLYSVVDPRVK 325 >UniRef50_A0KYK9 Binding-protein-dependent transport systems inner membrane component n=21 Tax=Shewanella RepID=A0KYK9_SHESA Length = 343 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 122/339 (35%), Positives = 201/339 (59%), Gaps = 6/339 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++LRRL L + T + + + F + P + + G S + Q+ + LD Sbjct: 1 MFRYLLRRLNLFLATSLVMVGVLFYATGLFPVERTFALTGIHAPSESQLVQIEQDYKLDS 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 Q++ Y+ + G+LG+S+ S V EE A+ EL V A + A +G+P+GVL Sbjct: 61 NKAMQFIAYLQQRLSGNLGVSVTSHQSVAEELSSVLPASFELAVMAAVIAIGLGVPLGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A+ + + +T + + LTGYS+P+FW G+ L + V P+SG+++ L + P Sbjct: 121 ASQSQHKLTQNTIMAITLTGYSVPVFWLGLYLSLWFGVDLGWLPISGQLN---LLYEIKP 177 Query: 181 LTGFMLIDTAIWGED---GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +TGFML+D + + F DA+ H++LPA L +P V+VR TRS+M+ V+ + +I Sbjct: 178 VTGFMLVDILLSDSEYRISAFKDALLHIVLPATTLAVLPFTVVVRSTRSAMMNVMNQTFI 237 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 R A A+G+ +I+ HAL NA++PV+ +GL +G + AI+ E IFSWPG+G WL+ Sbjct: 238 RAAEARGMHTNTIILRHALPNALIPVLKHLGLMLGAFASYAIVVEMIFSWPGVGSWLVSG 297 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + +RDY V+QGG+L VA +II +++L+++L+ V NP R Sbjct: 298 IYQRDYTVIQGGILAVALLIIFLSILIEVLHTVFNPLSR 336 >UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizobiales RepID=Q989T3_RHILO Length = 314 Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 199/338 (58%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ R+ +IP +T + F ++ PGD +++AG+ SP + A + L LD Sbjct: 1 MIRYLITRMLSIIPVMGVVTAVVFGLTYLSPGDAAVVLAGDYA-SPAQIAAIRERLHLDA 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY H++ V+ GDLG S+ S PV + R + T+ L + A + + + +P+G+L Sbjct: 60 PIVPQYFHWLGSVLRGDLGNSIFSEQPVLALILSRVEPTIILAIAATLVSVIIAVPLGLL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG I D + G ++P F G +LI V++ S P Sbjct: 120 AARKRGGIADQLVSFFGIAGTAIPAFLIGYLLIFTFGVYFG----------------SMP 163 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++GF +D+ W + + H++LPA +LG A+I R+TR+S +EVL +D+IR A Sbjct: 164 ISGFPGLDSGAW-------EVLRHVLLPATMLGFAQTALITRITRASAIEVLNQDFIRVA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +I+ H LR +P+VT++G+ +L G ++TET+F+ PG+GR L+DA+Q Sbjct: 217 RAKGLDEFTIIMRHCLRLIAVPLVTIVGMSFAYMLGGVVITETVFAIPGVGRLLVDAIQH 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D PV+QG +L+ + + +L+NL+VDL Y +PRI++ Sbjct: 277 KDVPVIQGVLLISSFVYVLINLMVDLSYLFFDPRIKYT 314 >UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter n=41 Tax=Cyanobacteria RepID=B1WR73_CYAA5 Length = 344 Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 120/323 (37%), Positives = 189/323 (58%), Gaps = 10/323 (3%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAE-LGLDKPMWQQYLHYIWGVMHGD 77 I L F + PGDP + G R +PE + L E LGL++P+W QY Y+ ++ + Sbjct: 28 IVTLVFLLLRATPGDPADAILGNR--APEATKEALRESLGLNQPLWLQYFAYLGQLLSFN 85 Query: 78 LGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGL 136 LG S+ S+ VWE F AT+EL +M+ A A+G+ +G+L+A + + D Sbjct: 86 LGTSITSQGQSVWEIIGQHFPATVELTFYSMVVAIAIGVTIGILSASRPNTSVDVGGRLF 145 Query: 137 ALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL--TGFMLIDTAIWGE 194 + YS+PIFW GM+ ++ +V P+ R L+ + P TG +D+ G Sbjct: 146 GIITYSLPIFWVGMLFQLIFAVQLRWFPLGTRFP----LNQTPPSGWTGIYTLDSLFSGN 201 Query: 195 DGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVH 254 G F+ AV ++ILP LG + + RM R ++ + L DY+ ARA+G+ R+++ H Sbjct: 202 LGQFLTAVYYLILPCFTLGLLLSGIFERMVRVNLRQTLQADYVEAARARGIPERRILLAH 261 Query: 255 ALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVA 314 AL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ RDYP VQG ++ Sbjct: 262 ALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAIAVRDYPTVQGIMVFFG 321 Query: 315 TMIILVNLLVDLLYGVVNPRIRH 337 ++++V++L+DL+ ++PRIR+ Sbjct: 322 AIVVVVSILIDLINAYIDPRIRY 344 >UniRef50_A4J1I5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1I5_DESRM Length = 336 Score = 220 bits (560), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 130/340 (38%), Positives = 197/340 (57%), Gaps = 9/340 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FIL+RLGL + +G+ +TF +IP DP G R +P++ ELGLD+ Sbjct: 1 MRSFILKRLGLGVLVLLGVITVTFFITRVIPSDPAAKWVGPRA-TPQQIEAARVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + GD G S++S PV EE AT+EL V + I A VGIP+GVL Sbjct: 60 PLFIQFGKYVTDLSQGDFGKSLRSHQPVAEELKAYLPATIELVVLSTIIAIFVGIPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS-DMVFLDDSN 179 +A ++ + DH + ++ S+P FW G+ L +L H P+ ++S D+ L + Sbjct: 120 SARRKDQLVDHFSRIFSVGAVSLPTFWVGLFLQLLFYRHLGFLPLGDQLSTDIKLLYEVP 179 Query: 180 PLTGFMLIDTAIWGEDGNFI---DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 +TGF+L D+ I GNF+ D + HMILP I + PL ++ RMTRS++LE+L EDY Sbjct: 180 HITGFLLFDSFI---TGNFVILQDVLIHMILPGITIALYPLGLVARMTRSALLEILNEDY 236 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I AR+ GL V+ +AL+N++ P VTV+ L +G L L E IFSWPG+G ++ Sbjct: 237 ISAARSYGLPEGLVLWKYALKNSLGPTVTVVTLSIGYTLVNTFLIEAIFSWPGIGSYISS 296 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 A+ DYP + G + A + +NL+ D + ++PR+R Sbjct: 297 AVISLDYPAIMGVTIFSAIAYVFLNLVADFIIA-LDPRVR 335 >UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXG5_9CLOT Length = 335 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 198/336 (58%), Gaps = 3/336 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+L+R ++ IG+T+L F + +P DP AG + + A+ + ELGLDK Sbjct: 1 MAKFLLKRFASLVLVIIGVTMLVFLATYYLPSDPARAAAGPSATNEQVEAKRV-ELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL Y+ G++ D+G S K++ PV +E R ATLEL ++I + + +G + Sbjct: 60 PIYVQYLEYMKGLLRLDMGTSFKTKQPVAQEISSRLSATLELTAVSLIVFFVLALILGSV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRG + D ++ G ++P +W ++ + P R+ V P Sbjct: 120 AALKRGGVLDGMIRFFSVAGMAVPPYWLALIFQYVFYYRLQWLPAGYRLP--VGTMPPEP 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF L+D+A G+ + A H++LP + L + RM R+ +L+ L +DYIRTA Sbjct: 178 VTGFYLLDSAFAGDWALLLQAARHLLLPVLSLVLGYCGITTRMMRTQLLQELRQDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL VI HA++NA+ P++T++G+Q G ++ G +L E IFSWPGLG + +DA+ Sbjct: 238 RSKGLPEHTVIRRHAMKNAISPILTLLGMQAGGMIGGTVLIEKIFSWPGLGSYALDAIAS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D VV G L +A + IL+NLLVD+ Y +++PR+R Sbjct: 298 LDLMVVAGITLTMAVIFILINLLVDISYVLIDPRVR 333 >UniRef50_Q11FQ8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FQ8_MESSB Length = 314 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 198/336 (58%), Gaps = 23/336 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRRL + I T + + L F + ++PGDPVM++ GE +PE A++ LG+D P Sbjct: 1 MNYYLRRLAVAIATVLISSSLVFFAIRILPGDPVMMLLGESAATPEVIARMAERLGMDAP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ ++ D G S+ + +PV E + R +LEL ++ + ++GIP+GV+A Sbjct: 61 LHVQYFRWLTDLLQLDFGTSIGTGLPVANELIKRLPRSLELMAGGILVSLSIGIPLGVVA 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + S + A LAL G S P F G++LI++ S+ L P SG P Sbjct: 121 ARRPDSFIGNAASVLALIGLSAPTFVKGLILIIIFSITLGLLPSSG----------FTPF 170 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 T D A + ++ILP++ LG V+ R+TR+S+ E LG+DY+RT R Sbjct: 171 TQ----DPA---------ANLRNLILPSLTLGLGFAGVVQRITRASLAETLGKDYVRTVR 217 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG++ + HAL NAM+PV+ V+G+++G++L G ++ E +F+WPGL +LI+A R Sbjct: 218 AKGVSENASVYRHALPNAMIPVIAVVGIRIGSMLGGMVVIENLFNWPGLSSYLIEACYAR 277 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYP +Q ++++ + LV+L +D+L G++NPR R Sbjct: 278 DYPAIQACLVVIFFVFSLVSLSMDVLMGIINPRRRD 313 >UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB n=3 Tax=Coriobacteriaceae RepID=C2D7K8_9ACTN Length = 345 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 132/358 (36%), Positives = 210/358 (58%), Gaps = 36/358 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI---------------- 44 M+++I++RL IP F+G+TL+ F +++PGDPV +MAGE+ + Sbjct: 1 MIKYIMKRLLQFIPVFLGVTLILFVMENVVPGDPVKLMAGEKKLDAVTELNLRATFHFIE 60 Query: 45 SPERHAQLLAELG--LDKPMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLE 101 + + A + E G +D P+W++Y ++ G++ GDLG+S +S PV + + ++ T+ Sbjct: 61 TDDNGAPIFDEQGNTIDTPLWKRYALFVSGLLQGDLGVSFQRSGQPVTQILLAKYPYTIS 120 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 L + A+ VGI G+++A+KR S +D +MP FW GM+L + + Sbjct: 121 LSIVAICLEAIVGIGAGMISAIKRYSFWDMFVTLATSVLVAMPAFWLGMLLQLFFGI--- 177 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 V D ++ GF + + G G+ D + ILPA+ L ++ A + Sbjct: 178 -----------VLKDLTD---GFFYLPISGVGGPGSNFDDWMYYILPAVTLASVSTAYVA 223 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R+ RS +LEVL +DYIRTARAKGL+R VI HAL+NA++PVVT IGL G ++AGAILT Sbjct: 224 RIMRSQLLEVLNQDYIRTARAKGLSRRNVIWHHALKNALIPVVTYIGLDFGGMMAGAILT 283 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ET+F+WPG+G A+ +RD+P V G V ++ +++++NLLVD+ Y ++PRIR Sbjct: 284 ETVFNWPGVGFETYRAITQRDWPTVLGSVTVIVVVVMVINLLVDVSYAFLDPRIRFSS 341 >UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFM8_9ACTN Length = 338 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 132/337 (39%), Positives = 195/337 (57%), Gaps = 2/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F L+RL + + +TL+ F +IP +P ++ G + PE A++ AELGLD+ Sbjct: 1 MLRFTLKRLLTAVVVLLILTLVVFLMTRLIPSNPAIVYVGPKA-PPEVIARVTAELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY Y+ G+ GD G S+ ++ PV E R ATLEL AM A G+ +GVL Sbjct: 60 PIFVQYFEYLGGLFTGDWGNSLSTKRPVLLELATRLPATLELIAAAMAIAALGGVTLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSD-MVFLDDSN 179 A + G I D L++ G SMP FW G++L + + L P +G+ S+ + + + Sbjct: 120 AVRRPGRILDGAIRFLSIGGVSMPAFWLGLLLQLFFVGNLKLLPATGQFSNALEYTNPIT 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 P+T F L D+ I G F D + H+ILPAI L PL ++ RM RS+MLEVLG+D+I T Sbjct: 180 PVTNFALFDSLITGNWAAFGDGLQHLILPAITLAAYPLGLMARMVRSAMLEVLGQDHIFT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA GL V AL+NA+ VTV GL + L G E +F+WPG+G+++ A+ Sbjct: 240 ARAYGLPERVVHWKLALKNALPSTVTVFGLSIAYALTGTFFVEVVFNWPGIGQFITAAMV 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP + LL A +L N +VD++ ++PR+R Sbjct: 300 AVDYPTIMAVTLLGAAAYLLSNFVVDVVQAKIDPRVR 336 >UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=11 Tax=Actinomycetales RepID=C7MV56_SACVD Length = 348 Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 129/337 (38%), Positives = 198/337 (58%), Gaps = 20/337 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++F+ +LG + +F + +L F MIPGDPV M +R SPE+ A+L LG+DKP Sbjct: 32 VRFLASKLGGALASFSLVVVLGFLLFRMIPGDPVATMTRDRPTSPEQLAELRERLGVDKP 91 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 M +Q++ Y+ G++ GDLG S PV + R TL L A + A A+G+ +GV A Sbjct: 92 MHEQFIDYVLGLLRGDLGTSYMYNRPVADMIGERLWPTLLLVGTATLLAVALGLWLGVRA 151 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + GS FD + G+ALT +SMP FW G++L++ L P G S ++ NP+ Sbjct: 152 AWRHGSAFDRVSTGVALTLWSMPQFWLGLLLLIATQ---GLFPSRGMRSPVI---PENPV 205 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +D H++LP + L + A + + RSS+LE +G DY+ TAR Sbjct: 206 --------------AQVLDVAHHLVLPCVTLLAVIYAQYMLVMRSSLLEEMGADYLTTAR 251 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V HA+ NA+LP VT++ LQ G +++G + ET+FSWPGLG +AL+ Sbjct: 252 AKGLRDDLVRRRHAVPNALLPTVTLVFLQFGMVVSGTVTVETVFSWPGLGLLTYEALRGP 311 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P++QG +++A+ ++++NLL +LLY V++PR+R Sbjct: 312 DLPLLQGVFVVLASSVLVMNLLAELLYRVLDPRVRES 348 >UniRef50_A0LI52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI52_SYNFM Length = 332 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/347 (37%), Positives = 197/347 (56%), Gaps = 28/347 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI--------MAGERGISPERHAQL 52 M +IL+RL +IPT +GIT +TF + + PG+P + G+RGISPE Q Sbjct: 1 MKGYILKRLLQIIPTLLGITFITFLIIQLAPGNPATLKLQMSGQGQLGDRGISPEVIEQT 60 Query: 53 LAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 GLDKP+ +QYL ++ V D G S K VWE+ R TL+L + ++ Sbjct: 61 KKLYGLDKPLHEQYLLWVKRVFTLDFGTSYKDHRNVWEKIAERLPVTLQLNLISIFLVYL 120 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS--VHWNLTPVSGRVS 170 + IP GV +AV+ GS +DH YS+P FW ++LIM + W++ P S Sbjct: 121 IAIPFGVYSAVRPGSFWDHALTLFFFFLYSLPSFWVAVLLIMFLGGGDFWDIFPAYNISS 180 Query: 171 DMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLE 230 + + +PL W +D V H++LP L LA + R+TR++MLE Sbjct: 181 --IGAEALSPLQ---------W-----LLDRVWHLVLPVTCLTYGGLAYLSRLTRANMLE 224 Query: 231 VLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGL 290 V+ EDY+RTARAKGL+ VI HA RNA+LP++T++ + ++ G+++ E+IFS PG+ Sbjct: 225 VIREDYVRTARAKGLSERVVIFKHAFRNALLPIITLLAFLLPSMFGGSVIIESIFSIPGM 284 Query: 291 GRWLIDALQRRDYPVVQGGVLLVATMIILVNLLV-DLLYGVVNPRIR 336 G+ +A+ RDYPV+ + V+ M+ L+ LL+ DLLY ++PRI+ Sbjct: 285 GQLGFEAVLGRDYPVIM-AITTVSAMLTLIGLLISDLLYAAMDPRIK 330 >UniRef50_A6UJI8 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Sinorhizobium RepID=A6UJI8_SINMW Length = 325 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 126/338 (37%), Positives = 194/338 (57%), Gaps = 20/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ++ +L RL I ++L+ F VH + G+PV + +PE Q LGLD+ Sbjct: 3 LISVVLGRLSQAFLLLIAMSLIGFIGVHSV-GNPVFNVVNIETATPEDIRQATIALGLDQ 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W+QYL +I V+ G+ G S +P + + + ATLEL AM+ A VG +G+L Sbjct: 62 PIWRQYLLFINNVVRGNFGTSYIYHLPAFALVMSKLPATLELACVAMLIAAPVGTGLGLL 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A + G+IFD T + ++ S+P FW MMLI+L ++ P GR + FL Sbjct: 122 AGRRSGTIFDRTVLRSSVFALSIPSFWLSMMLILLGAILTGWFPSGGRGTTARFL----- 176 Query: 181 LTGFMLIDTAIWGEDGNFI--DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 G++ +F+ + + HM+LPA+ L +A+I R++RS +EV D+ R Sbjct: 177 ------------GQEWSFLTGNGLWHMVLPALALAIPNVALIARLSRSGTIEVENLDFTR 224 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 RAKGL+ R+++ H L N +P+VT+IGLQ G +LA A++ ETIFSWPG+G+ LID++ Sbjct: 225 FCRAKGLSSRRILLRHTLPNISVPIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSI 284 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 Q D PVV + +A + +N LVDL Y V++PR+R Sbjct: 285 QLLDRPVVMATLTFIAVAFVALNALVDLFYAVLDPRVR 322 >UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 Tax=Actinomycetales RepID=A0R0E2_MYCS2 Length = 325 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 122/313 (38%), Positives = 185/313 (59%), Gaps = 24/313 (7%) Query: 24 FAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMK 83 F VH++PGDPV I G R +PE + L G+D+P+ +Q+ YI + GDLG+S + Sbjct: 35 FTLVHLVPGDPVRIALGTR-YTPEAYEALRTASGMDRPIVEQFFGYIGSALTGDLGVSFR 93 Query: 84 SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSM 143 + PV + R ATL LG+ ++ A + IP G+ +A++ G + D + G S+ Sbjct: 94 NGDPVTVTLLERLPATLSLGLVGILIALVIAIPAGIWSALREGRVSDAIVRVASQFGVSI 153 Query: 144 PIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVA 203 P F G++LI L + P SG PL + + G ++ Sbjct: 154 PDFRLGILLIGLFASVLGWLPTSG----------YRPL----------FDDPGGWLR--- 190 Query: 204 HMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPV 263 H+ILP + +G + A++ R RS++LEV Y+RTAR+KGL V H +RNA+LPV Sbjct: 191 HIILPGLTVGLVAGAILTRYVRSAVLEVAAMGYVRTARSKGLPPPVVTFRHIVRNALLPV 250 Query: 264 VTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLL 323 +T+ G+Q+ T+L G I+ E +F+WPGLGR + +++ RDYPV+QG VLL+A + +L+NLL Sbjct: 251 LTITGIQLATILGGVIVVEVVFAWPGLGRLVFNSVAARDYPVIQGAVLLIAVLFLLINLL 310 Query: 324 VDLLYGVVNPRIR 336 VD+LY VV+PRIR Sbjct: 311 VDVLYAVVDPRIR 323 >UniRef50_D0LZL0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZL0_HALO1 Length = 312 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 133/338 (39%), Positives = 200/338 (59%), Gaps = 34/338 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 F++RRLGL + G+++L F F+H+IPGDPV +AG PE+ + L LD+P Sbjct: 5 SFLVRRLGLGLIAMFGVSVLVFLFLHLIPGDPVDQLAGGDA-EPEQRQAIAECLHLDEPK 63 Query: 63 WQQYLHYIWGVMHGDLGISM---KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 Q+ ++ + +G LG +SR V + + T+EL M+ A + +P+GV Sbjct: 64 LVQFGIFLGNIGNGTLGQQCPNPESRPTVMDRVIEVMPYTIELAAAGMLVAVLLALPLGV 123 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 AAV+RG+ D + ++L+G S+P G + I++ ++ P SD F Sbjct: 124 AAAVRRGTWVDTLSAFVSLSGISIPTMLMGPLFILVFFIYLGWLPGPAE-SDQPF----- 177 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ++LPAIV+GT +A++ RMTRSS+++VLGEDY+ T Sbjct: 178 ------------------------ALVLPAIVVGTHLMAMLSRMTRSSLVDVLGEDYMTT 213 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL + V++ H LRNA+LPV+T+ GLQ G +L+GAI+TE IF+ PGLG L+D + Sbjct: 214 ARAKGLPPLIVLLKHGLRNALLPVITIAGLQFGAMLSGAIITEKIFARPGLGTLLLDGIN 273 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 R+YPVVQG VL++A + + VN+LVDL YG+ +PRIR Sbjct: 274 ERNYPVVQGTVLVIAVIYVSVNILVDLAYGLADPRIRR 311 >UniRef50_A1S0Q2 Binding-protein-dependent transport systems inner membrane component n=3 Tax=cellular organisms RepID=A1S0Q2_THEPD Length = 341 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/341 (37%), Positives = 209/341 (61%), Gaps = 9/341 (2%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHM--IPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +++L R+ L+ P + + LL+F F+ M +PGDP+ ++ G + I E A+ AELGLDK Sbjct: 5 EYVLYRV-LLTPVMLFV-LLSFVFILMRVLPGDPITMLEG-KNIPEEVLARRRAELGLDK 61 Query: 61 PMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P++ QY Y++ + + DLG + RIPV R AT+EL V A + A A+GI +G+ Sbjct: 62 PLYVQYFDYLYSLFVKRDLGETALERIPVAYLVASRLPATIELTVAATLIAAALGIALGL 121 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS--DMVFLDD 177 L+A + + + A + YS+P+F+ G++L ++ P +GR+S +MV +D Sbjct: 122 LSARYQYTGVQYFARFYSSVVYSVPVFYLGLLLQAYLAKPLGF-PTTGRLSPVNMVAVDS 180 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 TGF+ ID+ G +D +AH+ LPA+ LG V R+T S+ + + +DY Sbjct: 181 LPVRTGFVFIDSLAAGRLDILLDYLAHISLPALTLGVYLSGVFSRVTYLSVEDAMSQDYT 240 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 + AR +G+ V+ + LRNA++P++T+ GLQV LL GA+LTET F+W G+G + + Sbjct: 241 QAARGRGIREWTVVKRYGLRNALIPILTMTGLQVAALLGGAVLTETTFNWEGVGLLVYEG 300 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +RDY +VQG V + A ++ L +L+VD+LY V+PR+R++ Sbjct: 301 ILKRDYAIVQGAVTIYAVLVTLTSLVVDVLYAYVDPRVRYE 341 >UniRef50_B9KWU4 Binding-protein-dependent transport systems inner membrane component n=55 Tax=Bacteria RepID=B9KWU4_RHOSK Length = 328 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 133/336 (39%), Positives = 201/336 (59%), Gaps = 17/336 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRR + + +TLL F V MI G+P + ER A + A LGLD+ Sbjct: 1 MLLFALRRALQALGVLLALTLLVFVGVWMI-GNPADALISPDASMAEREAAIRA-LGLDQ 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W+QY ++ G++ GD G S R PV R A+LEL A + A V IP+G+ Sbjct: 59 PLWRQYFDFLGGLLRGDFGSSFVYREPVTAILASRLGASLELAFAAFVIAVGVSIPLGLY 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A ++ + A+GL+L G S+P FW GM+LI+L + + PV GR L ++ Sbjct: 119 AGLRPEARLSRAAMGLSLLGVSIPQFWQGMVLIILFGIWLAILPVGGRGETATVLGITSS 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L F L D + H++LPA+ + + +++++R+TR++++EV DYIR A Sbjct: 179 L--FTL-------------DGLMHLLLPALNMALLKMSLLMRVTRAAVMEVKSLDYIRFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R++ H L N +LPV+TV+G+++G L+A A++TET+FSWPGLGR LI ++Q Sbjct: 224 RAKGVRPHRIVTRHILGNILLPVLTVLGIEIGNLVAYAVITETVFSWPGLGRLLISSIQV 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D PV+ + A + IL+NL+VD+LY VV+PR+R Sbjct: 284 LDRPVIIAYLCFTALLFILLNLIVDILYTVVDPRVR 319 >UniRef50_A9WKA7 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Chloroflexi RepID=A9WKA7_CHLAA Length = 323 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 127/339 (37%), Positives = 201/339 (59%), Gaps = 21/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++LRRL + T ++L+ F + + PG + + A + ++ A++ A LGLD Sbjct: 1 MTTYLLRRLLQAVLTLFVVSLILFGLISVTPGGFMTVYAEKSDMTAADLARIRANLGLDD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ ++ GD G S+ S+ PV EE R TL L +I V IP+G+L Sbjct: 61 PVPIRYVKWLGNLLKGDWGRSLTSKRPVLEEIGSRLPNTLLLMSLMLICTLLVAIPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ S D+ +A G S+P+FW+G++LI++ SV ++ D P Sbjct: 121 SAIRQYSWLDNVLTTIAFAGQSLPVFWFGLLLIIVFSV-------------LLRGPDGKP 167 Query: 181 L---TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 L +G + GE + D + H+ILP +L + A +R RS+ML+V+ EDYI Sbjct: 168 LLPGSGMYTL-----GEPFSLWDRIRHLILPVTMLTFVSAAEYMRYMRSAMLDVIHEDYI 222 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTARAKG+ VI HALRNA++P+VT++ L + +L AGA+ TETIF+WPG+GR A Sbjct: 223 RTARAKGIQEWVVIYKHALRNAIIPLVTLLSLDLPSLFAGALFTETIFAWPGIGRLYFTA 282 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + DYP+V + + + +IIL NLLVDL+Y +++PRIR Sbjct: 283 ALKNDYPLVMAILTIYSALIILSNLLVDLIYAMLDPRIR 321 >UniRef50_B3EH22 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Chlorobiaceae RepID=B3EH22_CHLL2 Length = 321 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 129/337 (38%), Positives = 194/337 (57%), Gaps = 18/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +IL+RL L +P G+ LTF + + PGDP + G+SP Q+ A+ GL+ Sbjct: 1 MLTYILKRLLLSVPLIFGVLTLTFFIIRLAPGDPAAFFI-QPGVSPNVAEQIRAQYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ ++ V+ GD G S +++ PV+E T+ + ++ GI +G+ Sbjct: 60 PLPVQYVKWLGNVLQGDFGRSFSRAQQPVFEVIAEALPITVTIAALTLVANFTFGIIIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AV++ S D AL YSMP FW+ +M+I+L ++ P SG L++ Sbjct: 120 ISAVRQNSFLDRFLTVTALFFYSMPEFWFALMMIILFALKLQWFPASG-------LNE-- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 I +G G F+D + H++LP VL A I R R SMLEV+ +DYIRT Sbjct: 171 -------IGAESFGPFGFFLDRIWHLVLPVTVLSINGSAGIARYVRGSMLEVIRQDYIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL VI HALRNA+LPV+T+IG + + +GA+ E IF++PG+GR ++A+ Sbjct: 224 ARAKGLPEKVVIFHHALRNALLPVITLIGSSLPFIFSGALFIEVIFAFPGMGRVTVEAIF 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++ + T+I+L NLL D+LY V +PRIR Sbjct: 284 ARDYPLIIANTFISGTLIVLGNLLADVLYAVADPRIR 320 >UniRef50_Q53191 Probable peptide ABC transporter permease protein y4tP n=41 Tax=Proteobacteria RepID=Y4TP_RHISN Length = 313 Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 191/334 (57%), Gaps = 24/334 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +ILRRL I + + F + + PGDP ++AG + + A + ELGL++P+ Sbjct: 4 YILRRLVSTIAVMAMVGIFIFLLLRLAPGDPAAVIAGPTA-TEQMVANIREELGLNEPLP 62 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q++H+ V+ G+ G S+ + +PV + R + T+ L V MI + VG+ GVLAA Sbjct: 63 VQFVHWASDVLRGNFGASVFTGVPVLQLLSQRLEPTISLSVLTMILSVTVGVSFGVLAAW 122 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + G D + GYS+P+F G +LI ++ PV G S Sbjct: 123 RSGGFVDRALATFSAIGYSVPVFVIGYILIYFFAIQTRWLPVQGYTS------------- 169 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + A W H+ILP + L +A I R+TR SMLEVL EDY+RTA AK Sbjct: 170 -INQGVAPW---------FLHLILPTVTLSVPYIAFIARITRGSMLEVLSEDYMRTAAAK 219 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G + ++ HAL+NA +P++TVIG+ ++ G +LTET+F+ PG+GR ++DA++ RDY Sbjct: 220 GASPFAMLFHHALKNAGVPILTVIGISFAYMIGGVVLTETVFNVPGIGRLVVDAIKNRDY 279 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 P++Q ++L++ + +L+NLLVDL Y +++PRIR+ Sbjct: 280 PIIQTVLVLISGLYVLINLLVDLAYTLIDPRIRY 313 >UniRef50_Q1LMX8 Binding-protein-dependent transport systems inner membrane component n=36 Tax=cellular organisms RepID=Q1LMX8_RALME Length = 340 Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 192/339 (56%), Gaps = 22/339 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH-AQLLAELGLDK 60 L F L RL + IG+ ++ F + M PGDP +MAGE G + QL + GLD+ Sbjct: 10 LSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQ 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q Y+ GV DLG S ++ +PV + + R AT L A +F+ +G+ +GV+ Sbjct: 70 PVLTQLGIYLKGVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVI 129 Query: 121 AAVKRGSI----FDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 AA R D + AL Y+ P+FW +M I+L SV P G S Sbjct: 130 AARTRYENRRRWIDSAVMSGALLLYATPLFWLSLMAIILFSVVLGWLPAFGMESV----- 184 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 TG + D H++LP I LG +AV VR+TR+SMLEV+G D+ Sbjct: 185 -GAGYTGLARVQ-----------DIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDF 232 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 ++TARAKG+ RVI VH LRNA+LPV+T G+Q+G + GA+LTET+FSWPG+GR + D Sbjct: 233 VKTARAKGVPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFD 292 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 AL +RDY ++ G + + +++ NL+ D++Y ++PRI Sbjct: 293 ALLQRDYQLLLGIFFVTSALVVFFNLVTDVVYRFIDPRI 331 >UniRef50_B3TC47 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC47_9ZZZZ Length = 340 Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 119/323 (36%), Positives = 193/323 (59%), Gaps = 8/323 (2%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGD 77 + ++TF +IP D + + AG + A ++ L +P++ Q+ +Y ++ D Sbjct: 24 ALLIVTFTLSRIIPADVLWVWAGPFATKESKDA-IIEYYHLAEPIYVQFWYYFQDLLRFD 82 Query: 78 LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLA 137 LG S + P+ E RF T++L A+ + G+ G+++A+ R + DH A Sbjct: 83 LGNSPITHRPITLELAIRFPRTIQLTFFALFLSVVGGLSFGIISAIYRNKLPDHFTRLFA 142 Query: 138 LTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL-TGFMLIDTAIWGEDG 196 L G SMP+FW+G++L + + + + P G +S ++ P+ T F LID+ + G Sbjct: 143 LAGLSMPLFWFGLLLQLFLHFKYPIFPAIGVLSG-----EAAPIVTRFDLIDSLLAGRLD 197 Query: 197 NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHAL 256 F DA H+ILP+ L +A+I R+TRS MLEVLG+DYIR AR+KGL+ ++ HAL Sbjct: 198 IFWDAFMHLILPSFCLSYPYMAIITRITRSEMLEVLGQDYIRAARSKGLSDRIIMFRHAL 257 Query: 257 RNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI-DALQRRDYPVVQGGVLLVAT 315 RN ++P +T+IG+ G LL G++L ET+F +PG+G +++ A+++ DYP + G L+ Sbjct: 258 RNGIIPSLTLIGMTFGFLLGGSVLIETVFVYPGMGHYVVTQAIKQLDYPAIMGVTLVAGL 317 Query: 316 MIILVNLLVDLLYGVVNPRIRHK 338 + ILVNL VDLLYG ++PRIR + Sbjct: 318 VFILVNLAVDLLYGYIDPRIRFR 340 >UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bacteria RepID=A6Q8P1_SULNB Length = 317 Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 200/336 (59%), Gaps = 21/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ RL + ++ + F F+ GDP+ ++ + E AQ+ LGLD Sbjct: 1 MIRYVISRLFNSFLVMLAVSFIAF-FIMYKAGDPLQLLLPPDATAQEV-AQMRHTLGLDG 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 QY ++ + HG+LG S P + + R ATLEL + AM + +G+P+GV+ Sbjct: 59 SFLTQYKSFMIQLSHGNLGNSFIYGEPALDIVLERLPATLELAILAMGVSILLGVPLGVI 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +++ S+ + +LTG S+P+FW GMML+++ SV + + P SGR Sbjct: 119 SSMDPDSLKSKAIMLFSLTGISIPVFWIGMMLVLIFSVVFEILPSSGR------------ 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G + + ++++ DG + H+I+P L LA+I+R+T+S M EVL EDY++ A Sbjct: 167 --GEVYLFSSVFTWDG-----IKHLIMPVTTLSLFQLALIIRLTQSGMREVLTEDYVKFA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HA +N +LP++TVIG+Q G L+A I+TETIF+WPG G+ +ID++Q Sbjct: 220 TAKGLPRKVIVYRHAFKNTLLPLITVIGIQFGQLIAFTIVTETIFAWPGTGKLIIDSIQN 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D PVV +L+VA + IL+N +VD+LY V+PR+R Sbjct: 280 LDRPVVIAYLLVVALIFILINFIVDILYTWVDPRVR 315 >UniRef50_D2R8I2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8I2_9PLAN Length = 334 Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 132/341 (38%), Positives = 206/341 (60%), Gaps = 10/341 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ ++LRR+ + T + L F + +PG+P++ G+ E+ ++ G D+ Sbjct: 1 MIGYLLRRIAHALATIVVAVALVFIAMRSLPGNPLLARFGQHP-DAEQIERIRQANGWDR 59 Query: 61 PMWQQYLHYIWGVMH-GDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 PM +Q + W V+ GDLG S+ ++ V E + AT+EL A+ A +GI G Sbjct: 60 PMLEQLGKFFWQVVTTGDLGKSLVRTNSNVTAELARKVPATIELTFAALCLALPLGIGAG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V+A+V R D + L+L G S+P+F+ G+ L + P S R+ +F D Sbjct: 120 VMASVMRNRWPDRLCMVLSLLGVSIPVFFLGLCL----QKTFTWLPTSQRLPPEIF--DF 173 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 PLTG L DT G ++A H++LPA+VL TIP+AVI R+TR+SMLEVL D++R Sbjct: 174 EPLTGLYLFDTLWQGRPALTLEAARHLLLPALVLATIPMAVIARITRASMLEVLPADFMR 233 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA AKG +R R ++ HAL A +P+ + GLQ+G LL+GA+LTET+F WPG+GR+L DA+ Sbjct: 234 TAAAKGASRWRRVLYHALPAAAVPITNIAGLQIGLLLSGAVLTETVFDWPGVGRYLADAV 293 Query: 299 QR-RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 R +DY VQ +++A + + +NL++D++Y ++PRIR + Sbjct: 294 IRDKDYVAVQAAAIVIAALFVSINLILDIVYVWLDPRIRLR 334 >UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWH0_9BACE Length = 331 Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 128/339 (37%), Positives = 195/339 (57%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+ +RL + T ++++ F HM GDP I+ G + E+ +L L LD+ Sbjct: 14 MAKFLGKRLLSALVTIFLLSIIIFTISHMSKGDPAQIILGAEA-TEEQITELRHSLKLDR 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY+ +I+G + GDLG S + PV E R +L L + A I A V IP GV Sbjct: 73 PVVEQYIDWIFGAVRGDLGDSYYTGEPVLAEVASRLVPSLRLAIMAEILAVIVAIPAGVF 132 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +G D+ +L G S+P F ++LI++ V + PVSG Sbjct: 133 AAKNKGRGLDYMLSTTSLLGLSIPNFLMSLILILVFGVAFKALPVSG------------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + + + G F+ + ILP + LG +++RMTRSSMLEV+ DYI+TA Sbjct: 180 ---YRTLKSGV----GVFLK---YSILPVLALGLGQAGILMRMTRSSMLEVMNTDYIKTA 229 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG ++ HALRNA +P++T IG GTL AG + ETIF+ PG+G+ ++ ++ R Sbjct: 230 KAKGAKSTVILFKHALRNAFIPILTAIGQSFGTLFAGTAIVETIFNIPGVGQLVVTSITR 289 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY ++QG VL+++ M I++NL +D+LYGVV+PRIR K Sbjct: 290 RDYAMIQGVVLIISIMWIIINLALDILYGVVDPRIRLAK 328 >UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein AppB n=2 Tax=Clostridiales RepID=C7GGH7_9FIRM Length = 319 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 192/336 (57%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++R+ + IP +GIT++ +A + M G P+ ++ G R A+ +A LGLDK Sbjct: 5 MTKYIIKRILIAIPVLLGITVIDYAIMCM-AGSPLEMLQGPRVSEAAVQAKAIA-LGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++HG++G S+K+ PV TL L +++ + + +P G+ Sbjct: 63 PFYVQYFVWLGQLLHGNMGYSIKNYQPVAAMITSHLGPTLLLMGVSLLVSILLAVPAGIY 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+T V L+ G S+P F+ M+LI L +V P G + Sbjct: 123 SAIHQYSKGDYTVVTLSFLGSSIPGFFLAMLLIYLFTVKLGWLPSGGMTT---------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D HM++P IVL +R RS++LE+L +DY+RTA Sbjct: 173 -----------LGTSGGAADVAVHMVMPVIVLAVSMAGTNIRYIRSAVLEILQQDYLRTA 221 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P+VTVIG+++ L G+I+ E +FSWPGLG + A+ Sbjct: 222 RAKGIGHFLVINKHALRNALVPIVTVIGMEIPVLFGGSIIVEQVFSWPGLGLMTMSAITN 281 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+ G LL A +++L NLL D+LY VV+P I+ Sbjct: 282 RDYPVIMGVCLLSAIVVLLGNLLTDILYAVVDPTIK 317 >UniRef50_Q5QUD4 ABC-type dipeptide transport systems, permease component n=2 Tax=Idiomarina RepID=Q5QUD4_IDILO Length = 342 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 211/343 (61%), Gaps = 9/343 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL-GLD 59 M +++L RL + I +TL +F+ ++ PGDP+ M+G R S + L+AEL G D Sbjct: 1 MTRYLLGRLSVFIIAVFLLTLFSFSLNYLFPGDPITNMSGIR--SFQSSYPLMAELRGGD 58 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 + + QYL Y+ + GD G+S+ + PV+ + + F A++EL + A++ A G+P+GV Sbjct: 59 QNLAIQYLSYLQHLFAGDWGLSLSNGTPVFADGIQHFMASIELILMALLVAVLFGLPLGV 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 AA + D T + LA+ GYS+P+FW +LI+L ++ P++G+++ + ++ Sbjct: 119 FAASRFRQRSDQTVISLAMVGYSIPVFWLAQLLILLFAIKLGWFPITGQINPLYGVE--- 175 Query: 180 PLTGFMLIDTAIWGED---GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 P TG +LID + D DA+ H++LP I+L +P+ +++R+ R++ E+L + + Sbjct: 176 PKTGSILIDVFLSDSDYKAAALQDALNHIVLPVIILAIMPMMLLLRLMRNATQEMLQKPF 235 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 ++ ARA+GL RV++ HA+ NA+ V+ L LL +I+ E+IF+WPG+G WLI Sbjct: 236 VKAARARGLNEFRVLVKHAIPNAVQSVLQQTTLIFSLLLTNSIVVESIFNWPGMGNWLIR 295 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ++ RDYP++Q VL+ A +I+ NLLV+L +G P +RH++ Sbjct: 296 SIFERDYPIIQAAVLMFAFVILFFNLLVELYHGWRFPIVRHEQ 338 >UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n=74 Tax=Bacteria RepID=C1EU78_BACC3 Length = 334 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 117/335 (34%), Positives = 186/335 (55%), Gaps = 20/335 (5%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I+RRL +IPT G +++ F ++PGD + I+PER A+L GL+KP+ Sbjct: 20 YIVRRLLQMIPTLFGTSIIIFFLFALLPGDYI---DSNPKITPERAAELRELYGLNKPIV 76 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 ++Y H++ + GD G S++ + PV + + V A+ F + + +GV +A Sbjct: 77 ERYFHWLGNALQGDFGFSLQYQEPVTSLLNKFIWNSFSVAVIALFFIWLIALIIGVFSAT 136 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 K+ S+FD S P F+ G+ LI + +V + L P+ G + D + TG Sbjct: 137 KQHSLFDKLVTIGVFAAMSFPSFFIGLFLIKVFAVDFKLLPIGGMI------DVGSNSTG 190 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 F + I+ HMILP +L + + + R R+SMLEV+ +DYIRTARAK Sbjct: 191 FAYV-----------IEVAKHMILPVFILTLLGVGSLTRYFRTSMLEVVRQDYIRTARAK 239 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RDY Sbjct: 240 GLKEKTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGNIQLEALNFRDY 299 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 V+ + ++ + I+ N D++Y VV+PRIR K Sbjct: 300 TVLMAFTMFLSCLTIVSNFFADIVYAVVDPRIRLK 334 >UniRef50_C6DGJ5 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Proteobacteria RepID=C6DGJ5_PECCP Length = 325 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 207/336 (61%), Gaps = 17/336 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ ++L R+G + T +++L F V+++ G+PV ++ G ER A ++ GLDK Sbjct: 1 MIAYLLSRIGQTLLTLAVMSVLVFVGVYLV-GNPVDMLLGATATPAERLA-VIQSFGLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W+QY ++W GD+G S P R ATLEL + A + A VGIP+G+ Sbjct: 59 PVWEQYGLFVWNAFQGDMGNSFIFNQPALTLIFQRMPATLELAMVAFVMALIVGIPLGIY 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +K S + + ++ G+S+P FW G+++IML SV P SGR D + Sbjct: 119 AGLKPDSAVSKSIMTFSILGFSLPTFWIGLVMIMLFSVKLGWLPSSGR-------GDVHE 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L G I + DG + H++LPA L +++++R+ R+ ++E L +DY++ A Sbjct: 172 LFG---IPFSFLTRDG-----LEHLLLPAFNLALFKISLVIRLMRAGVMECLQQDYVQFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ R+++VH LRN ++P++TV+GL++G+L+A A++TETI++WPG+G+ +ID++ Sbjct: 224 RAKGLSETRIVLVHVLRNTLIPLITVLGLELGSLIAFAVVTETIYAWPGMGKLIIDSIAV 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D PV+ +++ M ++NLLVDLLY +V+PR+R Sbjct: 284 LDRPVILAYLMITVVMFSVINLLVDLLYVLVDPRVR 319 >UniRef50_A8IE65 Peptide ABC transporter permease protein n=6 Tax=Alphaproteobacteria RepID=A8IE65_AZOC5 Length = 317 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 195/343 (56%), Gaps = 31/343 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHA--QLLAELGL 58 ML F LRR + I + L F +H+IPGDP ++ + G++P+ A +L LGL Sbjct: 1 MLAFTLRRTLIAIGLVWLVGSLVFLVIHLIPGDPAELLLSQGGVAPDPGAVAELRERLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D P++ QYL Y G++HGD G S++ PV E R TLEL A + A AVG+P+G Sbjct: 61 DLPLYTQYLKYWSGLLHGDFGSSLQDEHPVASEIALRLPRTLELIGAAALMALAVGLPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 AA+K G D A ++ S+P+F G + I++ + G V+ Sbjct: 121 TAAALKTGGRLDRAASFISGLALSVPVFVVGTLAILVFAQKLGWASAGGYVALA-----Q 175 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPL---AVIVRMTRSSMLEVLGED 235 NPL F L +++PA GTI + AV+ R+TRSS+LEVL D Sbjct: 176 NPLRHFGL------------------LLMPA---GTIAVGLGAVVFRVTRSSVLEVLSRD 214 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 ++R A+A+G+ +I H LRNA+ PV+TV+ L +G+LL G +L E +F+WPGL +L+ Sbjct: 215 HVRAAQARGVPAGTIIRRHVLRNALSPVLTVVALHLGSLLGGTVLVEYVFNWPGLSGYLV 274 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +++ RDYP V G VL ++ + + +NL+VDLLY ++PR+RH Sbjct: 275 RSVEARDYPEVLGIVLAISILFVFLNLVVDLLYAALDPRVRHA 317 >UniRef50_A6X1T0 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Bacteria RepID=A6X1T0_OCHA4 Length = 313 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 122/338 (36%), Positives = 199/338 (58%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+++R+G + T + L F V ++PGDP +++ G++ SP A L +LGLD+ Sbjct: 1 MVSFLIKRMGFALFTLFSVLTLVFVIVRVLPGDPALVILGDQA-SPASIAALHHKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ GV+ G+LG SM + + E + T+EL + ++I +G+P GV Sbjct: 60 PIIVQYGSFMLGVLQGNLGTSMITGRSITAEIMNVLPYTMELTIASLILGVLLGVPAGVW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKR D ++L G S+P F ++L+M+ ++ PV Sbjct: 120 AAVKRNKPADLLLRLVSLLGLSLPAFVAAIILLMIFAIQLRWFPV--------------- 164 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + G DG +D + M LP I L I +A I R+TRS+MLEVL +D++RTA Sbjct: 165 --------ISSGGGDG-LLDRLRQMALPTISLALIMMAYITRVTRSAMLEVLNQDFVRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG + V+ HAL N +P+ TV+GL +G L+ ++LTE +FS PGLG+ +++AL + Sbjct: 216 KAKGASHHAVVWRHALGNCTIPITTVVGLYLGILIGNSVLTEIVFSRPGLGKLILNALTQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG +++ M++ VN+L DL YG ++PR+++K Sbjct: 276 RDYTLLQGMIVIYTLMVVAVNMLTDLTYGFLDPRVQYK 313 >UniRef50_C5ET18 Oligopeptide transport system permease protein appB n=2 Tax=Clostridiales RepID=C5ET18_9FIRM Length = 315 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 124/338 (36%), Positives = 194/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + +PT IGIT++ +A + G P+ +M G R IS A A LGLDK Sbjct: 1 MTKYIIKRLLIALPTLIGITIIDYA-IMCFAGSPLEMMQGAR-ISQAAVAAKEAALGLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++ G++G S+KS V TL L ++I + + +P G+ Sbjct: 59 PFYIQYFMWLGQLLQGNMGFSIKSYEAVGSMIGSHLGPTLLLMGVSLIVSLIMSVPAGIY 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+ V + G S+P F+ ++L+ + +V + P G V+ Sbjct: 119 SAIHQYSKGDYAVVTASFFGSSIPGFFLSLLLVYIFNVTLGILPSGGMVT---------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D AHM++P +VL +R RS++LE+L +DY+RTA Sbjct: 169 -----------LGTAGGAGDVAAHMVMPVLVLSVSMAGTNIRYIRSAVLEILQQDYLRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R VI HALRNA++P+VTVIG+Q+ L GA++ E +FSWPGLG + A+ Sbjct: 218 RAKGIGRRLVIYKHALRNALVPIVTVIGMQIPVLFGGAVIVEQLFSWPGLGLMTMSAILN 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G LL A +++L NL+ D++Y VVNP I+++ Sbjct: 278 RDYPVIMGVCLLSAVVVLLANLVTDIVYAVVNPAIQYE 315 >UniRef50_UPI0001C31351 binding-protein-dependent transport systems inner membrane component n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31351 Length = 320 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 123/337 (36%), Positives = 188/337 (55%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML F++RR I + ++L F + ++PGDP++ G G +PE QL E GL+ Sbjct: 1 MLGFVIRRAATSILMLVAASVLVFVILRLLPGDPIITRLGATAGANPEAIDQLRREAGLE 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QQY ++ GV+ GD G S S+ V E R ATLEL A+ F+ + +P V Sbjct: 61 DPILQQYFDWVGGVLSGDFGQSYFSQFSVTELISRRIGATLELTGVAIFFSLLIAVPAAV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +++RGS FD + G ++P F G++LI++ +V P G V Sbjct: 121 FCSLRRGSWFDRLVTTGSTVGMALPQFLLGILLILVFAVELRWLPARGYVP--------- 171 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + ED + V MILPA+ L +I+R R+SM+EVL YIRT Sbjct: 172 ------------FNEDPA--ENVKRMILPALTLAIAAAPLILRYLRASMIEVLDSSYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A KG+ RV++ HALRNA++P +T++G+ VG L G ++ E +F PGLG ++++ Sbjct: 218 AEGKGVPHRRVVVSHALRNALIPGLTMLGMIVGYTLGGVVIVEYVFGIPGLGSLAVESVF 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +RDY V+Q VLL++ + I L+VD+LYGV++PR+R Sbjct: 278 KRDYAVLQSVVLLISALFIFTTLVVDVLYGVLDPRLR 314 >UniRef50_A9BP21 Binding-protein-dependent transport systems inner membrane component n=53 Tax=Proteobacteria RepID=A9BP21_DELAS Length = 355 Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 126/336 (37%), Positives = 195/336 (58%), Gaps = 20/336 (5%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 F+L+RL ++ T +G + + F + ++PG+ + G +PE L +LGLD+P W Sbjct: 39 FLLKRLLMLAATLLGASAVVFGVLEVLPGNAAQTLMGPDA-APEAVHALAVQLGLDQPAW 97 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q+YL ++ G++HGD+G+S PV E + R T L V AM+ T + + G+ AA Sbjct: 98 QRYLQWLQGLLHGDMGLSYAYSTPVSELVLERLAVTAPLAVMAMLITTVLALAAGIYAAS 157 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + D +GLA G ++P FW+ ++LI++ SV G G Sbjct: 158 RHNRWGDLGIMGLAQVGIAIPNFWFAILLILVFSVKLQWFSAGG-------------FPG 204 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + D G + A+ ++LPAI L + A++ R+TRS++LEVL ED++RTARAK Sbjct: 205 WSEAD------GGGPLQALQALLLPAISLAVVQAAILARITRSAVLEVLREDFVRTARAK 258 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+R V+ H LRNAM+PV+TV+GLQ LLAG I+ E +F PGLGR + ++ RD Sbjct: 259 GLSRRAVLWGHVLRNAMIPVLTVMGLQFAQLLAGTIVVENVFYLPGLGRLIFQSIANRDL 318 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 VV+ VLL+A M++++N +VD+LY ++PRI Sbjct: 319 IVVRNCVLLLAAMVVVINFIVDVLYAAIDPRIEASD 354 >UniRef50_B9ZIL3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIL3_NATMA Length = 316 Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 123/338 (36%), Positives = 184/338 (54%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +L++ LRR +IP GI L F +H +PGDPV + G E L+A G D+ Sbjct: 3 LLRYALRRFVQIIPVLFGIVTLMFVMMHALPGDPVRLYLGTEP-GQELADDLIASYGFDR 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY Y+ + GDLG S PV + R + TL + + + A + I +G+ Sbjct: 62 PLHEQYFDYLVRLGQGDLGQSFVYNRPVSDLIWERMEPTLVVMGLSYLVALPMAIGLGIY 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A + DH + L G S P FW +MLI +V+ H L P SG S F+D Sbjct: 122 GAARHNEAGDHASRFAGLAGISTPNFWLALMLIYVVTYHLELLPASGYTSP--FIDP--- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++++ +I+P I L T A+++RMTRSSM+E L DYI TA Sbjct: 177 ------------------VESLTLLIMPVITLATAQTALLMRMTRSSMIEELRADYIETA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ +V+I H+ RNA+LP+VT++GLQV TLL G+++ E IF+ PGLGR D+L Sbjct: 219 RAYGIPERKVLIRHSFRNALLPLVTIVGLQVSTLLGGSVIVEEIFAIPGLGRLFFDSLID 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +DY V G L +T+ ++ +L D+ Y ++PRI++ Sbjct: 279 QDYSVAVGVTLFFSTLFLIGVVLTDIAYAYIDPRIKYD 316 >UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n=18 Tax=Bacteria RepID=Q30Y57_DESDG Length = 343 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 123/338 (36%), Positives = 192/338 (56%), Gaps = 24/338 (7%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL----GLDKPM 62 RRL V+ F GITL++FA +H+ PG P + + ++P+ A L GLD+P+ Sbjct: 22 RRLLWVMAVFWGITLISFAVIHLAPGSPTDL---QTTLNPQAGADARMRLEKLYGLDQPL 78 Query: 63 WQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY ++ ++ D G+SM + PVW++ R T+ + + +M+ + +PVG+ + Sbjct: 79 HVQYGQWVNRLIRLDFGMSMSGDMRPVWDKISERLPLTVGMNLASMLLTLLIALPVGIAS 138 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +G FD + L G++MP FW +++++L +H P+SG S Sbjct: 139 AYWQGRWFDRASTVLVFIGFAMPGFWLALLMMLLFGIHLGWLPISGITS----------- 187 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +D A G +D AH+ +P + LA + R RSSMLEVL +DYI TAR Sbjct: 188 -----LDYAQLSTTGKILDVAAHLAMPLFIYTFGSLAGMSRFMRSSMLEVLRQDYILTAR 242 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL VI HALRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ R Sbjct: 243 AKGLGLGTVIFRHALRNALLPVITILGLSVPGLIGGSVIIESIFALPGLGQLFYGAVMAR 302 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYP++ G ++L A + + NLL D+ YG+ +PRIR + Sbjct: 303 DYPLIMGNLVLGAVLTLAGNLLADVCYGLADPRIRSAR 340 >UniRef50_A3I8F4 ABC transporter, membrane spanning protein (Oligopeptide) n=1 Tax=Bacillus sp. B14905 RepID=A3I8F4_9BACI Length = 296 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 192/323 (59%), Gaps = 32/323 (9%) Query: 17 IGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHG 76 I ++L+ F F + GDPV IM G S + +L A+LGLDKP+W+QY+ ++ ++ Sbjct: 3 IAVSLIIF-FSIRLTGDPVSIMFGAGEPSQQAVEELTAKLGLDKPVWEQYIIFMKDLVTL 61 Query: 77 DLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGL 136 D G S +S PV E + R T+ L + M A + +P+G+L+A+ +G D + Sbjct: 62 DFGTSYRSNSPVLEMLLERAWPTIALALGGMAVALLIAVPLGILSAIYKGKSIDVFSRIF 121 Query: 137 ALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDG 196 +L G S P FW MLI++ +V PVSG Sbjct: 122 SLLGISFPNFWLAFMLILIFAVQLKWLPVSG----------------------------- 152 Query: 197 NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHAL 256 D + ++LP++ LG I ++VR+ R+SMLEVL Y+ TARAKG+ VII HA Sbjct: 153 --FDGFSSLVLPSVALGLILSGILVRLIRTSMLEVLKMQYVTTARAKGIREWLVIIKHAF 210 Query: 257 RNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATM 316 RNA+LP VT +GLQ G LL GA++ E +FSWPG+GR ++D++ +RDYPVVQGG++L+A + Sbjct: 211 RNALLPTVTFVGLQFGGLLGGAVIVEQVFSWPGIGRLIVDSINQRDYPVVQGGIILLALI 270 Query: 317 IILVNLLVDLLYGVVNPRIRHKK 339 +ILVNL+VDL Y ++NP+IR + Sbjct: 271 MILVNLIVDLCYSLINPKIRTGR 293 >UniRef50_C6CBH4 Binding-protein-dependent transport systems inner membrane component n=6 Tax=Proteobacteria RepID=C6CBH4_DICDC Length = 315 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 124/335 (37%), Positives = 192/335 (57%), Gaps = 24/335 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 ++L+RL LVI T + +++L F ++P D + + G+ +PE A + LGLD P Sbjct: 4 SYLLKRLLLVIYTLLVVSVLVFGITQLLPADAAVTLLGQHA-TPEALAAVRERLGLDAPA 62 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 W QY H++ +HGD G+SM++ +PV + +L L CA+ V +P+GV AA Sbjct: 63 WVQYGHWLAAALHGDFGVSMRTNLPVAPTLLTALSRSLLLAACALSLMLLVALPLGVWAA 122 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 V++G + D L+ G S P F ++++L + W L P +G V PL+ Sbjct: 123 VRKGKLADVLVSVLSYIGISFPEFVTATLMLLLFADIWQLLPATGYV----------PLS 172 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 + ID V H++LP+ + I +A + RM RS M++VL DYIR A Sbjct: 173 E-------------SLIDGVRHLVLPSATVAMILVAHVSRMVRSEMVDVLHTDYIRAAWL 219 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL+R R++ HALRN +LP +T++ L VG LL G ++ E IF+ PG+GR LI A+Q RD Sbjct: 220 KGLSRRRILWRHALRNGLLPAITIVALDVGYLLGGIVVVEEIFAIPGIGRELIVAVQARD 279 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 P +QGGV+++A+ +VN L DL Y +++ RI + Sbjct: 280 LPTLQGGVMILASTYAVVNFLADLAYAMLDKRIHY 314 >UniRef50_C7NEE9 Alkaline phosphatase n=14 Tax=Bacteria RepID=C7NEE9_LEPBD Length = 326 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 118/341 (34%), Positives = 201/341 (58%), Gaps = 24/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +L+F+++R+ + + T + +TF +HM+PGDP E+ I P+ L+A+ LD+ Sbjct: 4 ILKFLIKRIAMGLVTLWLVITITFFLIHMLPGDP---FQSEKAIPPKVKENLMAKYHLDR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPR-FQATLELGVCAMIFATAVGIPVGV 119 P+ +QY+ Y+ + GDLG SMK R + + + F + +LG ++IFA +GIP+G+ Sbjct: 61 PLGEQYVEYLKNIAKGDLGASMKVRGRTVNDVINKSFFVSADLGARSIIFALVLGIPLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIF-WWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +AA+KRG D ++ +A+ G S+P F G+M V +H + L ++ Sbjct: 121 IAALKRGKYQDKLSMIIAIIGISVPSFVLAGLMQKYFVDIHNGI------------LIEN 168 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 L F I + W D+ ILP + LG +A+I R+ R M+EV+G+DYIR Sbjct: 169 GFLPEFFRIRLSGW-------DSPEKKILPVVALGLYTVALIARLLRDKMIEVMGQDYIR 221 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 A AKG+ ++ HALRNA+LP++T++G + +L G+ + E +FS PGLG++ +D++ Sbjct: 222 LAIAKGVKPKNIVFRHALRNAILPIITIMGPTIAAVLTGSFVIEKMFSIPGLGKYFVDSI 281 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY +V G + A +I++ +LVD++Y +V+P+I+ K Sbjct: 282 NDRDYTMVLGVTVFYAIFLIIMMILVDIVYVLVDPKIKLGK 322 >UniRef50_A1SP55 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nocardioides sp. JS614 RepID=A1SP55_NOCSJ Length = 321 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 193/337 (57%), Gaps = 25/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ RL IP I I+++ F + + PGDP ++ G PE + E+ LD Sbjct: 1 MLRMATSRLLSSIPVLILISIVAFTLLRLAPGDPALLSVGLEA-PPEALERARQEMRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY ++ V+ D G S + PV E R TL+L A++F A+G+P+GV+ Sbjct: 60 PVWAQYWAWVTDVVRFDFGTSYTDKSPVTEVIAHRLPTTLQLAAVALLFIVAIGLPLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++ D +L G S+P F + L++ S W + P Sbjct: 120 SALRANRFTDQLIRVGSLAGISVPNFVVALFLVL--SFGW-------------WFPGIMP 164 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GF+ + GED ++++ + +LPA+ L + ++ R+ RSSMLEVLG+DY+ A Sbjct: 165 YQGFVSL-----GEDP--VESLKYTVLPAVALAAPQIGLVARLARSSMLEVLGQDYVSAA 217 Query: 241 RAKGLTRMRVII-VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 RA G+ R RVII LRNA+LPVVTV+G+Q G LL G+++ ET+F PGLGR L+++ Sbjct: 218 RAMGV-RERVIIWKDTLRNALLPVVTVLGVQAGFLLGGSVVVETVFGIPGLGRLLVESFT 276 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV G ++ +A + + +N++VDLLYGV+NPRIR Sbjct: 277 IRDYPVTIGVMMFIAAVFVFINIIVDLLYGVINPRIR 313 >UniRef50_C8Q8F0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pantoea sp. At-9b RepID=C8Q8F0_9ENTR Length = 306 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 121/337 (35%), Positives = 198/337 (58%), Gaps = 34/337 (10%) Query: 1 MLQFILRRLGLVIPTFI-GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLD 59 M ++ +++ L +P I G++++ F + +PGDP +MAG E + LGLD Sbjct: 1 MKAYVAKKV-LSLPLIIFGVSIIVFIAIRALPGDPARLMAGPEA-PQEAVDNMRIRLGLD 58 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY+ + +HG+LG+S++S+ PV E R TL L A + A A+G+P G+ Sbjct: 59 QPLPLQYVKFAADALHGNLGMSLQSQRPVLTEISERLPYTLSLAALAYLLAIAIGVPAGM 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 A+ R I D + L + G S+ FW ++ + +V P+ G Sbjct: 119 TGAIYRQRIPDQVVMVLTIAGASIANFWLALLAMNYFAVQLGWLPLLGA----------- 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+ + I+P + L +P+A+I RMTRSSML+VL +DYIRT Sbjct: 168 --------------------DSWRNYIMPTVTLAILPMAMIARMTRSSMLDVLSQDYIRT 207 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKGL+ + HALRNA++P+VT++ L G+L+ GA++TE++F+WPG+GR L+D+++ Sbjct: 208 AKAKGLSARSIHWKHALRNALIPIVTIVALNFGSLIGGAVVTESVFNWPGIGRLLVDSVR 267 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+QG L+ T ++L+NL+ ++L G++NP+IR Sbjct: 268 YRDYPVIQGVTLVAVTGVVLMNLVGEILIGLLNPKIR 304 >UniRef50_UPI0001C31411 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31411 Length = 313 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/334 (37%), Positives = 190/334 (56%), Gaps = 32/334 (9%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+LRR+ G+ +TF + ++PGDP +M G S E Q+ LG D P+ Sbjct: 7 RFLLRRVAQAAFVIFGVACVTFLVLRLVPGDPARLMVPP-GSSEETVQQIRERLGTDDPL 65 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 Q+ Y+ G++ GDLG S + PV E + ATL L + ++FA V +P+G+ AA Sbjct: 66 LSQFWSYLQGLVQGDLGESFRHERPVLELVLEAIPATLMLAMTTLVFALLVAVPLGIAAA 125 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + G + D + +++ G S+P FW G+ML++L +V P G + Sbjct: 126 ARPGGLLDRFTLVVSMVGQSLPNFWIGVMLVLLFAVERQWFPAIGNEGPKAY-------- 177 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 +LP I L + +A ++R R SM+E L EDY+RTARA Sbjct: 178 -----------------------VLPTITLSAVLIAALLRTVRQSMMEALHEDYVRTARA 214 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG+ + R+++VHAL+NA LP+VTV+GLQ+G + A + E IF+WPG+G + A++ RD Sbjct: 215 KGVPQHRILLVHALKNASLPLVTVLGLQIGFVFGAAFVVELIFNWPGVGLLTLQAIETRD 274 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +PVVQG V++VAT+ +L NLLVD+ Y +NPR+R Sbjct: 275 FPVVQGVVMVVATVFVLANLLVDVAYAYLNPRVR 308 >UniRef50_C7NYL3 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Halobacteriaceae RepID=C7NYL3_HALMD Length = 318 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/338 (34%), Positives = 193/338 (57%), Gaps = 26/338 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDKP 61 +FI++R+ L IP G++++TF VH+ PGDP+ ++ + P A L G D P Sbjct: 5 RFIVKRVLLTIPILFGVSIVTFGMVHLTPGDPIDVLVSFNPDVGPAEEAALRERYGYDLP 64 Query: 62 MWQQYLHYIWGVMHGDLG-ISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 +W+QYL +I V+ GDLG + +S + V + + R T+ LG+ +FA + IP G+ Sbjct: 65 VWEQYLRWIGNVLQGDLGPVITRSGVSVNDVIMNRLPETIVLGLFGWVFALVIAIPTGIY 124 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV + + DH + +AL+G S+P FW G+MLI+ ++ +N+ PV P Sbjct: 125 AAVNKDDLGDHVSRFIALSGISVPNFWLGLMLILFGALVFNIWPVL------------PP 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G + +DT +W +++P I +GT + ++R+ RSSM E L ++Y+ A Sbjct: 173 RNGLLSLDT-LW-----------FLVMPGITIGTASASTLMRIMRSSMAEELNKEYVTAA 220 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ H LRN+++ V TV ++AG+++ E +FSWPGLGR + A+ Sbjct: 221 RAKGLPEQTVILKHVLRNSLISVTTVAAFLTANIVAGSVVVEVVFSWPGLGREFVQAITS 280 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 R+ ++ L ++L NLL D++Y +++PRIR+ Sbjct: 281 REVNLILAITLFTGVALVLANLLADIVYAMLDPRIRYD 318 >UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bacteria RepID=Q8YVG6_ANASP Length = 335 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/339 (34%), Positives = 194/339 (57%), Gaps = 19/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++ RL + IPT I I+L+ F + + PGDP+ A I+ E + LGLD+ Sbjct: 16 MNKYLINRLLVAIPTLIAISLVIFTILALAPGDPMGEFALNPSITAEVRENIKRSLGLDQ 75 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ + GD+G S SR PV + + R TL + A + + IP+GV+ Sbjct: 76 PIHIRYIKWVIAFVRGDMGYSFTSRSPVIDLILQRLPTTLWVVGAAYLLGAILAIPLGVI 135 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+KR +I DH L G+S+P F+ G++ I++ S+ P F+ +S Sbjct: 136 SALKRHTIIDHVLTTLVFFGFSLPTFFTGLLFIIIFSIQLKWLP---------FIYNST- 185 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + W +FI + I+P VL A+++R RS +LE + +DY+RTA Sbjct: 186 ------LQVKDWQ---SFIAQIQQSIMPISVLALWQTAMLMRFVRSEILENIHQDYVRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL++ VI H LRNA++PVVT+I L + ++ GA++TE +F PG+G LID++ + Sbjct: 237 YAKGLSKFVVIRRHILRNALIPVVTLIALDIPSVFTGALVTEKVFRVPGIGALLIDSIYK 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 D PVV + A +I++ NL+ D+LYG ++PR+++ K Sbjct: 297 NDTPVVMAITFIYAILIVIFNLVADILYGFLDPRVKYTK 335 >UniRef50_UPI0001C313C7 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313C7 Length = 316 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/340 (37%), Positives = 194/340 (57%), Gaps = 26/340 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--GISPERHAQLLAELGL 58 M +++ R+ + T +G++++ F V ++PGD + +G+ G S R A L LGL Sbjct: 1 MARYLASRVAQLGLTLLGVSVVIFLLVRLLPGDVLDASSGDTVAGSSEGRDA-LREALGL 59 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P+ QY +I G++ GDLG+S++S P+ TLE+ + + A VGIP+G Sbjct: 60 ADPLPVQYFDWIKGLVTGDLGVSLRSGEPLANLLSTALPMTLEIVLLGVAIALLVGIPLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 VL+AV+ G D+ + + G S+P FW +++++ S + P S +S Sbjct: 120 VLSAVRSGRAIDYVGRAIGMIGVSLPSFWLATLMLLVTSSAFGWVPSSTYISPF-----E 174 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +PL GN A +ILPA+ + LA+++RM R++MLEVLGEDY+R Sbjct: 175 DPL--------------GNL----AALILPALCISVYMLALVMRMVRATMLEVLGEDYVR 216 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG V++ HALRNA+LPV+TV +VG LLA L E +F PGLG L+ + Sbjct: 217 TARAKGAAPRTVVVRHALRNALLPVITVSAFEVGVLLASTALIEVVFGLPGLGNLLVQGI 276 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY V+Q LL+A +L+NL+ D+LY +V+PR+ + Sbjct: 277 FNRDYAVIQTVTLLLAATFVLMNLIADVLYALVDPRVELR 316 >UniRef50_B3QZ99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=B3QZ99_CHLT3 Length = 310 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 188/336 (55%), Gaps = 30/336 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+ RL I G+ +TF ++++PGDP +M G+R A + ELGLDK Sbjct: 1 MFTFVTHRLLYAIVVIYGVMTITFFLMYILPGDPARLMLGQRADVQSIEA-IRTELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY ++ G+LG S + V E + RF AT L V ++ +T +GI +GVL Sbjct: 60 PLHEQYFAFLANAAQGNLGRSYATNRDVLETILERFPATALLAVSSLAISTVLGIAIGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK + D+ + AL G S P F+ G+++ + P+SG +S+ Sbjct: 120 SAVKPYTWLDNLFMLFALLGMSAPGFFAGLLIAWVFGFLLGWFPISGYISEG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 W H++LP L PL++ R+TRS+ML+VL +DY+RTA Sbjct: 172 -----------W----------QHLVLPMTTLALRPLSINARLTRSAMLDVLSQDYVRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ I HALRNA+ PV+T + + LLAG+ E IF+WPG+G IDA+Q+ Sbjct: 211 FAKGVSFRSAIFRHALRNALNPVLTAVSSWLAGLLAGSFFIEFIFNWPGIGLLAIDAIQK 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+P++QG VL A + I++N+ VD+LY +++PR++ Sbjct: 271 LDFPMIQGVVLFTAVIFIIINIAVDMLYALLDPRVK 306 >UniRef50_Q11BX9 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BX9_MESSB Length = 319 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 127/341 (37%), Positives = 196/341 (57%), Gaps = 25/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV--MIMAGERGISPERHAQLLAELGL 58 ML+++L RL L IPT +G+ LTF + ++PGD V M+ A +PE A A LGL Sbjct: 1 MLRYLLNRLMLAIPTLLGVATLTFFMLALLPGDAVETMLRADGGNPTPEIIAAERARLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+ Q+ ++WG+ GDLG S + PV +E + R TLEL V MI A + +P+G Sbjct: 61 DRPILVQFGDFLWGLFTGDLGSSSWTGKPVLDEIMLRLPVTLELAVLGMIIAVVIALPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LA + G+ D+ A G ++P FW GMML + + +N P G S+ +F S Sbjct: 121 TLAGIFHGTWLDNLIRIFAFGGIALPSFWLGMMLALAMLWFFNWLPPLG--SNSLF---S 175 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +P I + + LPA+ +G A++VRM R+S++E + EDY+R Sbjct: 176 DP------------------IRVLQQLTLPALAVGYRYAAMLVRMMRASVIEAMSEDYVR 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL ++ H + N++LP VT+IGL+ ++ ++ E +FS GLGR ++++ Sbjct: 218 TARAKGLPASSIVRRHIVPNSLLPTVTIIGLEFALMVGSLVVIEQVFSLNGLGRLFVESV 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R D V+QG V+++ + I +NLLVDL Y ++PRIR + Sbjct: 278 ARSDLIVIQGIVVVLTIIFIAINLLVDLAYAAIDPRIRLGR 318 >UniRef50_Q28KP0 Binding-protein-dependent transport systems inner membrane component n=6 Tax=Alphaproteobacteria RepID=Q28KP0_JANSC Length = 321 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 132/340 (38%), Positives = 202/340 (59%), Gaps = 24/340 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGLD 59 + ++LRRL + +G+++ F + ++PGD + M G G ++P + L A GLD Sbjct: 1 MSYLLRRLAVFPLVMLGVSIFVFVAIRLVPGDAITAMLGTEGGMLTPAQREALTAYFGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 + QY+ ++ G+ GDLGIS+ PV + + RF TL+L + +M+ A +G+P GV Sbjct: 61 QNWAIQYVRWLGGLFGGDLGISVTYGQPVLDLILERFPLTLQLALMSMVIALLIGLPAGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 AA + D A+ G SMP F ++LI +SV + + P GR + F +D Sbjct: 121 FAATQANRASDLIVRIFAMIGQSMPNFVVALLLIYGLSVVFGVLPTMGRY--VRFTED-- 176 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 PL GN +A MILPA LGT A + R+TR++ML++L EDY+RT Sbjct: 177 PL--------------GN----LAQMILPAFALGTAFAAAVTRITRAAMLDILSEDYVRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR++G ++ VI HAL NA++PV+T+ G++ G LL GA++ E IF+ PGLGR ++DA+ Sbjct: 219 ARSQGFSQAYVIWRHALPNALIPVLTLSGVEFGYLLGGAVIVEQIFALPGLGRVVLDAIG 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY +VQG +L +A ++VNLLVDL Y ++PRIR+ Sbjct: 279 ERDYALVQGVILFIAFNFMVVNLLVDLAYAALDPRIRYGS 318 >UniRef50_UPI0001C32156 binding-protein-dependent transport systems inner membrane component n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32156 Length = 341 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 134/336 (39%), Positives = 191/336 (56%), Gaps = 29/336 (8%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGLDKP 61 +++RR G+ + T ++L FA +PGDP + MAG +P Q GLD Sbjct: 24 WLVRRFGISLLTIALASVLVFASARALPGDPALTMAGAGAGRPTPAMLEQARERYGLDAS 83 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QYL Y+ + GDLG S S +PV R TL+L V +M+ A +G+ GVLA Sbjct: 84 LPVQYLRYVERAIQGDLGTSASSDLPVARMIGERLPVTLQLAVMSMLLAVTIGVGAGVLA 143 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ RG D+ + L G S+P FW G+ML++L +V+ P SG Sbjct: 144 ALFRGRAADYAVTAIGLLGISLPNFWLGLMLVLLFAVNLGWLPASG-------------F 190 Query: 182 TGFMLIDTAIWGED--GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 T FM ED N D MILP +LGT+ AV++R RSSM++ L DY+RT Sbjct: 191 TPFM--------EDPVANLRD----MILPVWMLGTMMAAVLLRQMRSSMVDALQSDYVRT 238 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR+KGL RV++ HALRN M+P++T+ GLQ+G L++GA++ E +F PGLG L+D + Sbjct: 239 ARSKGLPPYRVVVGHALRNCMIPLLTLTGLQLGALISGAVVAEHLFVLPGLGTLLLDGVH 298 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDY VVQ L++A +L+N VD+LY V +PR+ Sbjct: 299 ARDYAVVQAVALVMAVGYVLINFAVDVLYSVADPRV 334 >UniRef50_Q28TH0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Jannaschia sp. CCS1 RepID=Q28TH0_JANSC Length = 302 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 44/342 (12%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAE----L 56 M +IL R+ T + L F F+ + GDP + + P+ +++ + + Sbjct: 1 MTGYILSRVFRATLTMLVTVTLVFLFIRL-SGDPAAAL-----VPPDAPQEVIDQYTRAM 54 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLD+P+WQQYL Y+ G++ G+ G S+ + IPV + F+ R TL LGV A+ A +GIP Sbjct: 55 GLDQPLWQQYLGYVGGLLQGNFGFSIHTGIPVEDTFLGRLPYTLHLGVTALALAVLIGIP 114 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 VG LAA++RG+ D +G ++ ++MP F +G+++I++ ++ + Sbjct: 115 VGALAAIRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFR--------------- 159 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 T + GED N +I PA+ LG + R TRSS+LE + Y Sbjct: 160 ------------TFLGGEDAN-------VIWPALTLGLAAMGSFARFTRSSVLETINAPY 200 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +R A A+G+ M ++ HA NA +P+VT+IGL +G L+AG+++TE +F+WPG+G+ L+ Sbjct: 201 MRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVAGSVVTEQVFAWPGVGQLLVR 260 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ RD VQ VL+VA +++ NL+VDLLY V++PRIR K Sbjct: 261 SVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIRAK 302 >UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropyrum pernix RepID=Q9YFD8_AERPE Length = 342 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 13/346 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ++++I+ R IPT G+++L F ++ GDP I ++PE ++ D Sbjct: 2 LIKYIIYRFLSAIPTLFGLSILVFILTRLV-GDPAAIYI-HPDMTPEDVQRVRELYHFDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY++++ GV+ GDLG S+ + +PV E ATLEL + A + VG+ +G Sbjct: 60 PLYVQYIYWLKGVLQGDLGYSVTANMPVTEAIKSFLPATLELALYAFTLSIIVGVYLGTK 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSG--------RVSDM 172 AA + + DH LAL+GYSMP+FW +ML+ L +N+ G R M Sbjct: 120 AAANKDKLIDHLTRLLALSGYSMPVFWLALMLLYL---FYNVLDFVGPGRLSLEVRFKYM 176 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 D TG + ID + FIDAV H+I P + I +A+ +R+ RSSM+E + Sbjct: 177 PPYGDFKFYTGLLTIDALLNRNIEVFIDAVKHLIPPVLTQTYIHIAIFIRVLRSSMIEEM 236 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 ++Y+ A +KGL R V+ + RN+ + +V V GLQ L++G +LTET+F+WPGLGR Sbjct: 237 NKEYVDFALSKGLRREVVLKDYVRRNSYISLVNVAGLQFVGLMSGVVLTETVFNWPGLGR 296 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +A + D V G L V T+ I+VNL VD+L ++PRIR++ Sbjct: 297 FAANAAIQLDPAAVVGFTLFVGTLFIVVNLAVDILLAYLDPRIRYE 342 >UniRef50_A3JXK8 ABC transporter permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3JXK8_9RHOB Length = 296 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 188/316 (59%), Gaps = 24/316 (7%) Query: 24 FAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMK 83 F ++ PGD V + G +S + A ELGL++P W QYL ++ V+ GD G S+ Sbjct: 2 FLINYLSPGDAVTALLGSDALSSDIEAAR-EELGLNEPFWVQYLSWLTAVLRGDFGYSLF 60 Query: 84 SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSM 143 R V + + + T++L + ++I + IP+G AA RGS D +G+ L G ++ Sbjct: 61 LRTTVVDAILTKLVPTMQLAILSLIVTLLISIPLGTFAARYRGSALDQGVMGVTLIGQAV 120 Query: 144 PIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVA 203 P F G++LI+L V PV+G VS F D PL DA+ Sbjct: 121 PSFVLGLLLILLFGVILRWLPVAGYVS---FFTD--PL------------------DALR 157 Query: 204 HMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPV 263 H LPA+ LGTI A+I R TR+++L+VL +YI AR++G++ R++ H LRNA LP+ Sbjct: 158 HFALPALSLGTILAALITRTTRAAVLDVLNSEYIDAARSRGVSENRLLFTHTLRNAGLPI 217 Query: 264 VTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLL 323 +T++GL GTL+ GA++TE IF+ PG+G L++A+ RRDY V+QG VL + +L+NL Sbjct: 218 LTMVGLSFGTLVTGAVVTEAIFNIPGIGSLLVNAISRRDYAVIQGVVLFITVAYLLINLS 277 Query: 324 VDLLYGVVNPRIRHKK 339 +DLLYG+++PR+R + Sbjct: 278 IDLLYGLIDPRVRLSE 293 >UniRef50_A1AYK8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AYK8_PARDP Length = 311 Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 127/336 (37%), Positives = 199/336 (59%), Gaps = 27/336 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL RL +PT + + L F + ++PGDP + G+ G PE AQ GL+ Sbjct: 1 MTRYILTRLLDAVPTMLLVLTLVFLAMRVLPGDPALAALGD-GAQPEAIAQFRERFGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QYLH++ ++ D G S+ S V + V T+EL + A++ GIP+GV+ Sbjct: 60 PLWLQYLHFMRDMLTFDFGASLMSGERVAQLLVSNLGYTVELTIAAVLLGIMGGIPLGVM 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ R D +L GY++P F+ G +L+++ S+ P+SG Sbjct: 120 AALNRNRAPDAGFRVFSLLGYAIPDFYLGAVLLIVFSLSLGWFPISG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 DG F D + H++LPA+ L + +A + R+TR+++LEVLG D++RTA Sbjct: 167 ------------AGDG-FADRMHHLVLPALTLALLKVAFLGRLTRTALLEVLGRDFVRTA 213 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG RVI HALRNA+LP+ T +GL + + L+G++ E +F+ PGLG+ LI A+ Sbjct: 214 RAKGARENRVIYRHALRNALLPLSTGLGLSILSTLSGSVAVELVFNRPGLGKLLITAITE 273 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP+VQ GV++ A +++VNLL++L+Y +++PRIR Sbjct: 274 RDYPIVQAGVVVFAAAVVVVNLLMELVYVIIDPRIR 309 >UniRef50_Q6ML30 Dipeptide transport system permease protein DppB n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML30_BDEBA Length = 323 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 115/339 (33%), Positives = 194/339 (57%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV-MIMAGERGISPERHAQLLAELGLD 59 M FI RR+ + + ++ + F + ++PGDPV M++A I+ E A+L + GLD Sbjct: 1 MTTFITRRILQTLAVIVILSYVCFYLMSLMPGDPVDMMVASNPKITAEDVARLKSLYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P++++Y ++ ++ GDLG S R+PV E PR T L ++I + + IP+GV Sbjct: 61 QPVYKRYASWMGSILQGDLGYSRTYRVPVQELMGPRLWNTFLLSAISLILSIGIAIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A+K GS D+ + G S+P FW ++LI+L +V + + P G + Sbjct: 121 ISALKPGSRTDYIVNLFSFGGISIPSFWLAIVLIILFAVKFPVLPAGGTQT--------- 171 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D +W + D ++ILP + L + R TRS+MLE + D+IRT Sbjct: 172 ----IGASDLGLWAD---IKDRSIYLILPVLSLSIQQIGRFSRFTRSAMLEAMRNDFIRT 224 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+R VI H RNA++P++T++ L L +GAILTET+F++ G+G+ + D++ Sbjct: 225 ARAKGLSRKTVIWQHGFRNALIPLITILALSFSGLFSGAILTETVFAYQGVGKLVYDSII 284 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V ++ +M++L+NL+ D++YG +PRI ++ Sbjct: 285 GNDYNVAMISFVISVSMVLLMNLVADIMYGFADPRISYQ 323 >UniRef50_C8WQ73 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WQ73_ALIAD Length = 302 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 122/309 (39%), Positives = 179/309 (57%), Gaps = 24/309 (7%) Query: 28 HMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIP 87 H+IPG+P I+ G+ HA L A++GLDKP+ QYL ++ V+ GDLG S+ P Sbjct: 11 HLIPGNPAEILLGQDATPQAIHA-LDAQMGLDKPLLMQYLTWLLNVLRGDLGTSLVDHEP 69 Query: 88 VWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFW 147 V + + R T+EL MI A + P+GV AAV RG + D A+ A G S+P FW Sbjct: 70 VSQLILQRLPVTVELAFGTMIVAILIAFPLGVAAAVMRGRVADFVAMFTATVGISVPPFW 129 Query: 148 WGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMIL 207 G++ ++L +V ++L S V IW + ++ M+L Sbjct: 130 LGILFLLLFTVKFHLVANSLYVP--------------------IWQDPLKNLEC---MLL 166 Query: 208 PAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVI 267 P + G AV++RM RSS+++ LGED++RTA AKGL V + HAL NA++PV+T Sbjct: 167 PCVATGIREAAVLLRMLRSSLMDALGEDFVRTAWAKGLKGAAVTLRHALPNALVPVLTAG 226 Query: 268 GLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLL 327 GLQ+ LL G ++TE +FS PG G+ L+ ++ RDY VQG L+ A ++I+VNLL+DL Sbjct: 227 GLQIAGLLGGLVITEQVFSLPGFGQLLVQSVFSRDYTTVQGTALVAALIVIIVNLLIDLT 286 Query: 328 YGVVNPRIR 336 Y ++ RIR Sbjct: 287 YSRIDLRIR 295 >UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n=94 Tax=Firmicutes RepID=C9XN43_CLODC Length = 319 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 117/343 (34%), Positives = 192/343 (55%), Gaps = 31/343 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQ----LLAEL 56 ML+ IL R+ ++IP I I++L+F + + PGDP + I+P +Q + + Sbjct: 1 MLKLILNRVKVLIPMLILISILSFGLLELAPGDP-----ADAYINPLMSSQDIENIRVNM 55 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLDKP++ +YL+++ + G+LGIS + +PV E+ + + T L ++IF+ V IP Sbjct: 56 GLDKPVYIRYLNWLKNTLSGNLGISYINHMPVTEQIMEKMGNTFILMGTSLIFSILVAIP 115 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G+ AV + SI + G S+P FW GM+LI + SV N+ P G + Sbjct: 116 LGIFLAVNKNSITSKVSSVFNYIGVSIPSFWIGMILISIFSVKLNIFPSGGMHT------ 169 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 G D + D V H++LP I LG A+ +S+ E L + Y Sbjct: 170 ---------------IGND-SIGDLVKHLVLPVITLGLYNTAIFTNYVEASVNEQLKKQY 213 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 + TARAKGL+ ++ H L+N++ +VT++G+ + L+ GA +TE +FSWPG+GR +ID Sbjct: 214 VITARAKGLSEKVILFKHVLKNSLTSLVTILGMSIQKLVTGAFVTEVVFSWPGMGRLMID 273 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ++ RDY V+ +L A +IL NL+ D+LY +++P+I+ K Sbjct: 274 SIFSRDYTVIMAITMLSALFLILGNLVADILYLLIDPKIKSSK 316 >UniRef50_C9RPN3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPN3_FIBSS Length = 338 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 123/354 (34%), Positives = 190/354 (53%), Gaps = 32/354 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV----------MIMAG----ERGISP 46 M +ILRRL L+IPT IGI+L+ F + ++PG PV M G + +SP Sbjct: 1 MRSYILRRLLLMIPTLIGISLVCFILIQLLPGGPVEELISRAQQAASMKGGVDASKALSP 60 Query: 47 ERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCA 106 ++ AQ+ A G D+P W++YL ++W V+H +LG S +PVW+ V RF +L GV + Sbjct: 61 DQIAQIQAYFGFDQPAWKRYLTWLWNVLHLNLGESYTYGLPVWDVIVSRFPISLFFGVTS 120 Query: 107 MIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS--VHWNLTP 164 + + IP+G+ AV GS D GL +GY MP + G++LI+ ++ + ++ P Sbjct: 121 FFLSYLICIPLGLWKAVHHGSKLDSFTSGLIFSGYVMPGYALGILLIIFLAGGSYLDIFP 180 Query: 165 VSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMT 224 + G SD D T F G D H+ LP A + + Sbjct: 181 LGGLTSD-----DFEDFTFF-----------GKVFDLAQHLALPIFCYMISEFAFLTFLM 224 Query: 225 RSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETI 284 ++S LE LG DY+RTA AKGL+ + ++ HALRNA++P+ T + + AGA+L E + Sbjct: 225 KNSALEELGRDYMRTALAKGLSFKQALVRHALRNALIPIATRLSEICTLMFAGALLIEKV 284 Query: 285 FSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 F G+G +++ RDY VV G + L + M ++ L D+LY +V+PRI+ Sbjct: 285 FDIDGMGLLYYNSMVNRDYNVVMGIIFLSSLMAMVGRLFSDILYTLVDPRIKFS 338 >UniRef50_C1XGM8 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=2 Tax=Meiothermus RepID=C1XGM8_MEIRU Length = 315 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 199/338 (58%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + LRRLGL + T TLL F + +IPG+P + G +P L A LGLDK Sbjct: 1 MFAYTLRRLGLALVTLWLATLLVFGALLLIPGNPAQAILGIEA-TPADLEALEARLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P ++Y+ ++ GV+ GDLG S++ P+ E V R TL + V +++ AT + +P+G+L Sbjct: 60 PPLERYISWLGGVLRGDLGQSIRYEQPISELIVARLGITLPIVVASLLLATILAVPMGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS D +L G +P FW G+M I + V W P L S P Sbjct: 120 AARKAGSPIDLGVSVASLLGIVLPSFWVGLMFIYIFIV-WLRLP----------LPTSFP 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + G+ N A+A ++LP + + + +VR+ R S+LEVL +D+IRTA Sbjct: 169 IGGW-----------ENPERALAALVLPVLTVALASASFLVRLVRGSVLEVLSQDFIRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLT V+ HALRNA LPVVTV+GL+ +LL ++ ET+F PGLG + A+ Sbjct: 218 RAKGLTERVVLYKHALRNAALPVVTVLGLEFASLLIATVVVETVFGIPGLGSLSLTAISA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+VQG VL++A I+L+NLLVDLLYG+++PR+ + Sbjct: 278 RDYPLVQGVVLVIAAFIVLMNLLVDLLYGLLDPRVSYA 315 >UniRef50_B1XIM7 Binding-protein-dependent transport systems inner membrane protein n=15 Tax=Cyanobacteria RepID=B1XIM7_SYNP2 Length = 344 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/338 (37%), Positives = 198/338 (58%), Gaps = 10/338 (2%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAE-LGLDKPM 62 +IL RL L + I + F + PGDP + G R +PE LL E LGLD P+ Sbjct: 13 YILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNR--APEATKALLREQLGLDLPL 70 Query: 63 WQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 W QY+ Y+ ++ DLG S+ SR +PVWE F AT+EL + MI A VG VG+LA Sbjct: 71 WLQYVRYLGSLLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLA 130 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP- 180 A ++G+ FD + Y++P+FW GM++ ++ SV P+ R LD P Sbjct: 131 ASRQGTWFDVGGRLFGIITYALPLFWMGMVVQLIFSVQLGWFPLGTRFP----LDVPPPP 186 Query: 181 -LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 L+G +D+ + G A+ +++LP LG + + R+ R ++ + L DY+ Sbjct: 187 TLSGLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQSDYVEA 246 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA+G+ +++ HAL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ Sbjct: 247 ARARGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAIS 306 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP VQG ++ ++++V+L++D++ +++PRIR+ Sbjct: 307 LRDYPTVQGIMVFFGAIVVVVSLVIDIVNALIDPRIRY 344 >UniRef50_Q2FMZ9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Methanomicrobia RepID=Q2FMZ9_METHJ Length = 313 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 199/347 (57%), Gaps = 43/347 (12%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG------ERGISPERHAQLLA 54 M Q+I+ R G +I T ++ TF V+ IPG+P ++A E PE A++ A Sbjct: 1 MHQYIVMRTGYLILTLFIASVFTFCVVNAIPGEPAEVLAKHLFLGLEESAPPELIAEVSA 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHGDLGISM---KSRIPVWEEFVPRFQATLELGVCAMIFAT 111 L+KP+ +QY +I G++ G+LG S+ KS + E ++P T+ L AM FA Sbjct: 61 RYDLNKPLIEQYSEWIRGILSGNLGNSIIYNKSVGKLLELYLP---PTILLTSFAMTFAI 117 Query: 112 AVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSD 171 GI +G+ +A+ + DH + + SMP FW +MLI++ S+ NLTPV+G Sbjct: 118 ITGIALGIASALHQNKTADHLIRFITIFSISMPSFWVAVMLILIFSLWLNLTPVAG---- 173 Query: 172 MVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEV 231 +GE ++ILP I LG +A I R+ R+SML+ Sbjct: 174 --------------------YGEP-------KYIILPLIALGLHSMASIARIMRTSMLDT 206 Query: 232 LGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLG 291 + + +I ++AKGL+R +++ HA +NA LPV+TVIG+ G+LLAG+++ ETIF+WPG+G Sbjct: 207 MEKPFIIFSKAKGLSRKKILFSHAFKNAFLPVLTVIGMSFGSLLAGSVIIETIFTWPGIG 266 Query: 292 RWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L+ A+ RD V++ ++++ M ++VN ++D+LY V++PRI ++ Sbjct: 267 ALLMKAISARDLVVIESTIMVIVFMFLIVNFVIDILYHVIDPRITYE 313 >UniRef50_A8F7C8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F7C8_THELT Length = 339 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/340 (34%), Positives = 198/340 (58%), Gaps = 8/340 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLDK 60 L++ + RL + G+ L+ + ++P DP + G S ++A+ +L LD Sbjct: 4 LRYSVSRLISSLIVIFGVILVVYVISAVVPSDPAALWVGPHPTYSALQNAR--EKLKLDL 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++++ ++ ++ GDLGIS+++ PV ++ F AT EL + + A +GI +GV Sbjct: 62 PLFERFFYFFKDLLRGDLGISIRTHNPVSQDIFKAFGATFELILFSEFLAIIIGIILGVY 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A V + + D A+ G S+P FW+GM+L ++ + + P+S R+ +V L +NP Sbjct: 122 AGVYQNKLPDSINRIFAVAGVSLPGFWFGMILQLIFFKYLGILPLSDRIDIVVSL--TNP 179 Query: 181 ---LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +TGF LIDT I F+D + H+ILPAI L P+ +I R RS M+EVL E+YI Sbjct: 180 FKEITGFYLIDTLIDRNIPAFVDVLKHLILPAITLSVYPIGLITRQVRSMMIEVLNENYI 239 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RT+ A G+ + ++ +AL+NA+ P + + L L GA L E IF+WPGLGR+ ++ Sbjct: 240 RTSIAYGIPKRKIYFQYALKNAIAPAMVTVALSFAYTLVGAFLVELIFNWPGLGRYAANS 299 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 + DYP + G L+V+ +L+N +VD+L ++PRI++ Sbjct: 300 ILSMDYPAIVGVTLVVSITYVLINFVVDILQAKIDPRIKY 339 >UniRef50_A0R7D2 Dipeptide transport system permease protein DppB n=10 Tax=Bacteria RepID=A0R7D2_MYCS2 Length = 332 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 132/318 (41%), Positives = 189/318 (59%), Gaps = 33/318 (10%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDL 78 + + F V M GDP+ ++ + ++ QL AELGLD+P+ QYLHY+ G++HGDL Sbjct: 45 VATVAFLLVRM-SGDPLALLLPPDA-TQQQVEQLAAELGLDQPLLVQYLHYLSGMLHGDL 102 Query: 79 GISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLAL 138 G S+ PV R AT L V A++ + + +P G+LA+ RG I D G+ L Sbjct: 103 GQSIFFDQPVVSLIGERLPATALLAVAALVLSLVISLPAGILASAHRGRITDTVISGIVL 162 Query: 139 TGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNF 198 G S P FW G++ I+L +V + P +G +G Sbjct: 163 IGQSTPAFWIGILFILLFAVRLRVLPAAG------------------------YG----- 193 Query: 199 IDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRN 258 AH++LPAI L +AV+ R+ R+S+ E L DYIRTA AKGL+R +V++ H LRN Sbjct: 194 --GAAHLVLPAITLAIYSIAVVARVLRTSLAEELSADYIRTATAKGLSRRQVVVGHGLRN 251 Query: 259 AMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMII 318 A LPVVTV+GL+ G+LL GAILTE +FSWPG+GR ++A+ RD+ +VQG VL A + + Sbjct: 252 ASLPVVTVVGLEFGSLLGGAILTEQVFSWPGIGRLTVEAISNRDFALVQGAVLFFALVFV 311 Query: 319 LVNLLVDLLYGVVNPRIR 336 +VNLLVDL Y +++PR+R Sbjct: 312 VVNLLVDLSYTLLDPRVR 329 >UniRef50_C0ZIB9 Dipeptide ABC transporter permease protein n=35 Tax=Bacteria RepID=C0ZIB9_BREBN Length = 312 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 119/341 (34%), Positives = 194/341 (56%), Gaps = 35/341 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+ RR +I T I LTF +H +PG P + ++ A L A LDK Sbjct: 1 MLSFVFRRFISMIVTLWLIITLTFFLMHAVPGSP--FEKEGKALNEAVAANLNAYYNLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPR-FQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ ++ DLG S+ + + + R F + +LG+ +++FA GI +GV Sbjct: 59 PLLVQYGLYLQKLVQFDLGPSIANSSDTVNKMIARGFPVSFQLGLISVVFAIVTGIALGV 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA++ + D+ A+ +A+ G S+P F +LI ++V W L P Sbjct: 119 IAALRHNRLIDYLAMIIAVIGISVPSFVVASLLIKYMAVEWKLLP--------------- 163 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 TA WG + H+I+PA+ L P+A+I R+TR++MLEVL ++YI T Sbjct: 164 ---------TATWG-------SWQHVIMPALALAFGPIAIIARLTRTNMLEVLTQEYIET 207 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +++ HALRNA+LPVVT++G + +L G+ + E IF+ PG+G++ + + Sbjct: 208 ARAKGLSPATIVLKHALRNAILPVVTLLGALIANVLTGSFVIEKIFAIPGMGKYFVAGIN 267 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR-HKK 339 RDY V+ G + + ++I + +VD+LYG+++PRI+ H+K Sbjct: 268 NRDYSVIMGTTVFYSALLIFLMFVVDVLYGIIDPRIKLHRK 308 >UniRef50_D1C147 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C147_SPHTD Length = 320 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 120/334 (35%), Positives = 189/334 (56%), Gaps = 24/334 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RR+ L+ P +G++++ F +H+ PGDP + E+ P Q+ LGLDKP+ Sbjct: 7 NYIVRRILLLFPLLVGLSMVVFTIIHLAPGDPALAFVSEQSFDPTVVEQVRKNLGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMK-SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY + V D G + +R PV R T++L A+ + AV IP+G+++ Sbjct: 67 PVQYGIWASKVARFDFGTAYTFNRKPVITLIGERLSNTVKLQALAISISLAVAIPLGIIS 126 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A ++ S+ D+ A G A G ++P FW +ML + +V P S + P Sbjct: 127 ARRQYSLVDNLATGGAFLGLALPDFWLALMLQLFFAVRLGWLPAS----------TAGP- 175 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 E F++ +++ +LPA VL +A+ R RSSMLEV+ +DYI TAR Sbjct: 176 ------------EAEGFVEKLSYFVLPATVLAIPTIAIFTRFMRSSMLEVIHQDYITTAR 223 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ HALRNA +P+VTV+G Q+ LL+G+++ E +F+WPGLG A+ +R Sbjct: 224 AKGLAERAVVFRHALRNAFVPMVTVVGNQLPRLLSGSVIVEAVFAWPGLGHLGYQAILQR 283 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DYPV+ LL I+++N++VD+LY +++PRI Sbjct: 284 DYPVILALTLLTGAAILVINVIVDVLYAILDPRI 317 >UniRef50_B9JQI2 Inner membrane component of binding-protein-dependent transport system n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQI2_AGRRK Length = 348 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 120/339 (35%), Positives = 188/339 (55%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLD 59 +Q + RL T + + +LTF V + PGDP +++AG++G S P A++ LG+D Sbjct: 23 FVQAVSLRLAKAAITLLAVIVLTFVLVRLAPGDPALLLAGDQGGSDPAFVAEIRQHLGVD 82 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ Q HY+ V D G S + + PV + + R ATL L + A +F+ G+ +G Sbjct: 83 GPIHLQLWHYLQAVARLDFGTSYRDQRPVIDIVLERLPATLLLTISAFVFSIVTGVGLGA 142 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA + GS D L++ ++MP+FW G++ I++ +V P Sbjct: 143 LAARRPGSAIDSAVTTLSVAFFAMPMFWIGLIFIIVFAVKLGWLPS-------------- 188 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G A G F D AHM+LP + LG +++ R++R+++L++ D+IRT Sbjct: 189 --YGMQAASAAAKGGWAAFGDLAAHMVLPVLTLGLYYMSIHARVSRAALLQISDMDFIRT 246 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V H LRNA+LP VTV LQ G L+ G+IL ET+F+WPG+GR D+L Sbjct: 247 ARAKGLPAWLVWRDHLLRNALLPTVTVAALQAGQLIGGSILVETVFAWPGIGRLAFDSLA 306 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY V+ +L + +++ NL+ D+ Y +++PRI + Sbjct: 307 SRDYNVLVAVFILSSFGVLIANLIADMAYRLIDPRIDRE 345 >UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4F9_9FIRM Length = 321 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 120/326 (36%), Positives = 186/326 (57%), Gaps = 32/326 (9%) Query: 15 TFIGITLLTFAFVHMIPGDPVM----IMAGERGISPERHAQLLAELGLDKPMWQQYLHYI 70 T + +TL FA + M+PGDPV A E I+ RH G D+P+ QYL +I Sbjct: 24 TILLVTLFVFALIQMVPGDPVANYLGATATEEQITYYRHLY-----GFDRPVIVQYLSWI 78 Query: 71 WGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFD 130 G+ G +G S+ + + + +PR TL + + A I T GI G++AA RG D Sbjct: 79 GGLFRGTMGQSISYQSEIADIILPRLGTTLTMVIPAFIIGTITGILFGIIAAKNRGKTID 138 Query: 131 HTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTA 190 A G SMP+FW GMM +++ ++ + P SG V P+T D Sbjct: 139 SVISFFANIGVSMPMFWLGMMGMLVFALKLRVLPSSGYV----------PITR----DFG 184 Query: 191 IWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRV 250 W ++HMI+P IVL A VR+TRSSMLEV+ +DY+ TARAKG+++ V Sbjct: 185 GW---------LSHMIMPIIVLSLGVNAGFVRLTRSSMLEVMRQDYVTTARAKGVSKKDV 235 Query: 251 IIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGV 310 H LRN+M+P+VT +G+++G+++ +L E++F PGLG +++ + RD+ +V GV Sbjct: 236 TFRHQLRNSMIPIVTTMGMRLGSMVGSTVLIESLFVIPGLGSVMMNGISNRDFMLVANGV 295 Query: 311 LLVATMIILVNLLVDLLYGVVNPRIR 336 L+++ + + NL+VD+LYG+++PR R Sbjct: 296 LIISIFVAICNLVVDILYGIIDPRTR 321 >UniRef50_Q213C0 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Rhodopseudomonas palustris RepID=Q213C0_RHOPB Length = 322 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 123/324 (37%), Positives = 189/324 (58%), Gaps = 18/324 (5%) Query: 14 PTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPMWQQYLHYIWG 72 P +G+ +L F +HM PG +M E+ ++ P QL G+D+P Q YIW Sbjct: 14 PLILGVIVLNFMLIHMAPGSLFDVMTSEQQVTDPAMLDQLRHTYGVDQPTSVQLAKYIWS 73 Query: 73 VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHT 132 VM DLG S + PV + + + +T+ L + A A VGI GVLA+VK +I+D+ Sbjct: 74 VMRLDLGFSYRQNAPVLDVILEQLPSTVILMLSATAIALLVGITAGVLASVKVNTIWDNL 133 Query: 133 AVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW 192 A+ ++ P FW G+M+ +L +V PV G M + Sbjct: 134 ISLGAVFFFAAPSFWLGIMMTVLFAVKLGWFPVGG-----------------MRTIGSEH 176 Query: 193 GEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVII 252 G G+ +D + H++LPA LG A R+ R+SMLEV D++RTARAKGL+R RV+I Sbjct: 177 GAFGDALDVMHHLVLPATALGLFYAATYARVMRASMLEVFRLDFVRTARAKGLSRGRVVI 236 Query: 253 VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLL 312 H +RNA+LP+VT++GLQ+GT+L G+++ E +FSWPG+G L D++ R++P+V G ++L Sbjct: 237 AHVMRNALLPIVTLLGLQLGTILGGSVVIEAVFSWPGIGSLLFDSVMSRNFPMVLGVLVL 296 Query: 313 VATMIILVNLLVDLLYGVVNPRIR 336 + ++ + N VDL+Y ++PRIR Sbjct: 297 GSLLVAVSNAAVDLIYLRLDPRIR 320 >UniRef50_C0GIS4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIS4_9FIRM Length = 316 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 122/336 (36%), Positives = 182/336 (54%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +LRRL + +G+T+ TF +H PG P+ E + P + L LD+ Sbjct: 1 MTLLVLRRLAQTVIVLLGVTVATFFIMHSAPGHPLQ-ANPELRLDPTAVERWLELRDLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GD G S+ PV E R ATL L V + + A A + G+ Sbjct: 60 PLPAQYVSWVSRMLRGDFGNSLIYNRPVVELIAERLPATLLLTVSSFLLALATAVVCGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS+ D ++L G SMP FW GM+ IM+ S P G + Sbjct: 120 AAIRQGSLLDRLVGAVSLLGISMPGFWLGMLFIMVFSYRLAWLPGVGMRTP--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +G F+D VAHMI+P VL A VR R ++LE+L +D++R A Sbjct: 171 ------------GGEG-FLDLVAHMIMPVTVLAVAGFAHYVRYVRGAVLEILEQDFVRAA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+GLT+ +++ H L NA +P+VTV L + L GA++ E +FSWPGLGRW+I + Sbjct: 218 RARGLTQKQILFRHILPNAAVPIVTVAALSIPMLFTGALVAENVFSWPGLGRWIITSTLA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+ + A ++ L N L D+LY V++PR+R Sbjct: 278 RDYPVIMTVNMYTAMLVALANFLADVLYMVIDPRLR 313 >UniRef50_P0AGH4 Peptide transport system permease protein sapB n=181 Tax=Gammaproteobacteria RepID=SAPB_ECO57 Length = 321 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 108/283 (38%), Positives = 174/283 (61%), Gaps = 11/283 (3%) Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W ++ + G++H D G+S + P+ E+ F AT+EL + A FA VGIPVG++A Sbjct: 40 LWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIA 99 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 + R D+ +AL G+S+P+FW ++L + S+ PVSGR L + P+ Sbjct: 100 GITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFD---LLYEVKPI 156 Query: 182 TGFMLIDTAIWGEDGNFID-----AVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 TGF LID W D + D A+ HMILP I L P ++R+ R S +EV ++Y Sbjct: 157 TGFALIDA--WLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNY 214 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 ++ A +GL+R ++ H L NA+ PV+ +GLQ T+L A++TE +FSWPGLGRWLI+ Sbjct: 215 VKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLIN 274 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 A++++DY + GV++ +++I+VN++ D+L + NP ++HK+ Sbjct: 275 AIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANP-LKHKE 316 >UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41 Tax=Rhizobiales RepID=Y2551_BRUO2 Length = 319 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 124/338 (36%), Positives = 191/338 (56%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV-MIMAGERGISPERHAQLLAELGLD 59 ML++ L RL + + + +T+L F + + PGDP+ + ++ L A+LGLD Sbjct: 1 MLRYCLHRLLIGLGMLLALTILIFVLLQLTPGDPIDAYINPNVAMTQAEMDALRAQLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QYL ++ + G+LG S++ V R TL L + A +G+ G Sbjct: 61 RPLPVQYLAWLGQAVQGNLGHSLQRFNETVSGLIASRIGPTLLLMAAGLAIAIVIGVTTG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++AV+R S D++ LAL G S P F ++ + + SV P G ++ Sbjct: 121 IISAVRRNSFPDYSFSVLALLGISSPAFLTALLGLYVFSVRLKWAPSGGMLT-------- 172 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 P T F + D + H+ LPA+VL A+I+R RSSMLE L +DY+R Sbjct: 173 -PATDF------------SIPDLLRHLALPALVLSIGHAALIMRYMRSSMLETLNQDYVR 219 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ V++ H LRNAMLPVVT+IG +G + GAI E++F+WPG+G LI+A+ Sbjct: 220 TARAKGVREFWVVVKHTLRNAMLPVVTLIGSTIGLAVGGAIFIESVFNWPGMGLLLINAV 279 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + RDYPV+ G L++ +I+VN+L DL Y V++PRI+ Sbjct: 280 ETRDYPVIMGATLVIGACVIIVNILTDLAYAVIDPRIK 317 >UniRef50_Q7MLN8 ABC-type antimicrobial peptide transport system, permease component n=61 Tax=Vibrionales RepID=Q7MLN8_VIBVY Length = 321 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 115/341 (33%), Positives = 198/341 (58%), Gaps = 29/341 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + +RRL L + T +T++ F+ + + DP + A Sbjct: 2 MFWYAVRRLNLFVITLAILTMVGFSILRL---DPESVWA-------------------QA 39 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W + Y+ + + G+S KS +++E F ATLEL A + A +GIP G + Sbjct: 40 EYWHGWSIYLSELAQLNFGVS-KSGAAIYDELAVVFPATLELCFFAFLVALLIGIPFGTI 98 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +K+G D T ++++GYS P+FW ++++M+ S+H+ + PVSGR D+++ + Sbjct: 99 AGMKQGKWVDTTISFVSMSGYSAPLFWVALLMLMVFSLHFEIFPVSGRY-DLLY--EIKH 155 Query: 181 LTGFMLIDTAIWG---EDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +TGF +ID + + + HM+LP +VL P ++ + R+S+ +V+ ++YI Sbjct: 156 VTGFAIIDAFLAKGPYKAHALQSVIEHMVLPCLVLALAPTTQVIGLMRASVADVMSQNYI 215 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 R AR KGLT ++ H LRNA+ P++ +G+Q+ ++L AI+TE+IF+WPG+GRWL+DA Sbjct: 216 RAARIKGLTTREIVTQHVLRNAIPPIIPKVGVQLSSMLTLAIITESIFNWPGIGRWLLDA 275 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L RDY +Q GV++VAT+++ N+L DL+ ++NP +R + Sbjct: 276 LSNRDYVSIQAGVMVVATLVLTANILSDLIGAMINPLVRKE 316 >UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligopeptide transport n=6 Tax=Firmicutes RepID=Q8DPF3_STRR6 Length = 331 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 106/338 (31%), Positives = 198/338 (58%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 M ++IL+++ +IP + I+ L F + + P DP+ M + S E+ +L +LGL+ Sbjct: 16 MKKYILKKVLFMIPMLLIISFLVFIALDLTPADPLTYMVSPDMASSAEQIEKLRQQLGLN 75 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +Y ++W ++HGD G S+ + P+ + AT EL ++I +T VGI +GV Sbjct: 76 DPVLVRYGRWLWQLLHGDFGYSIVNGNPISKIVGQALPATFELAFVSLIISTIVGIVIGV 135 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+ I D+ A LA+ G ++P F++G++++ ++ + P+ GR + Sbjct: 136 ISAVKQNGIIDNVARFLAVIGTAIPQFFFGILILNFFAIQLRILPIGGRFAS-------- 187 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D FI+ V H+ILP + + +A ++R TR+SML+V DY++T Sbjct: 188 --------------GDFTFINRVEHLILPVMAMSIALVAALMRYTRNSMLDVFNADYVKT 233 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+ +V H RNAM P++ ++ ++ L+ G+++ E++FSWPG+G ++ ++ Sbjct: 234 ARAKGVPEWKVYFKHIFRNAMRPILVLLIFRLPMLIGGSVIIESVFSWPGIGSIILSSVT 293 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+ L+++ +++ +LLVD++ +++PRIR+ Sbjct: 294 AGDYPVIMITTLMISVVVLFASLLVDIMAAILDPRIRY 331 >UniRef50_D2RRT8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RRT8_9EURY Length = 333 Score = 206 bits (524), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 118/339 (34%), Positives = 194/339 (57%), Gaps = 10/339 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +L++ + R+ IP IGI+++TF ++ PGDPV +M + S E + GLD+ Sbjct: 3 LLKYTIHRVLQAIPVLIGISVITFLLANLGPGDPVSLMLQGQEHSEELVRSIEQRYGLDR 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++YL Y+ G++ GDLG S+ + PV + R TL L + A FA IP+GV+ Sbjct: 63 PLHERYLTYMAGLVQGDLGRSIHYQRPVAGLMLDRLGPTLLLVLSAYAFALVTAIPLGVI 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +R DH + +AL G S P FW G++LI++ +V P SG V P Sbjct: 123 AADRRNEPTDHVSRIVALVGVSTPSFWIGIVLILVFAVKLGWLPSSGLVYPW------RP 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ID G + ++ H++LP I LGT+ +A I+R+ R+ M+E L +Y+R A Sbjct: 177 PSAYRWID----GHLELYYQSLRHLLLPMIALGTLQMATIMRVERTQMIESLQGEYVRLA 232 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ V+ HA + A LP++T++GL + T + GA+L ET+F G+GR IDA+Q Sbjct: 233 RAYGVPERTVLRKHAFQPAQLPIITIVGLNLSTAIGGAVLVETVFDINGMGRLFIDAIQS 292 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DY +V G + + + ++ ++ D+ Y ++PR+ + + Sbjct: 293 NDYQLVMGITMTLGALFVIGVIITDISYAYIDPRVTYGE 331 >UniRef50_Q3A9M3 Oligopeptide ABC transporter, permease protein n=2 Tax=Bacteria RepID=Q3A9M3_CARHZ Length = 308 Score = 206 bits (524), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 113/322 (35%), Positives = 180/322 (55%), Gaps = 35/322 (10%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDL 78 I +TF +H IPG P + + PE L+A+ LD+P+ +QY +Y+ ++ GDL Sbjct: 19 IATITFFLMHSIPGGP---FTDAKKLPPEVEKNLMAKYHLDQPLLKQYEYYMLNLLKGDL 75 Query: 79 GISMKSRIPVWEEFVPR-FQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLA 137 G+S+K E + F + LG A++ A G+ +G+++A+K+ SI D+ +V +A Sbjct: 76 GVSIKYEGRTVNEIIKDGFPVSASLGFIALLIAVTFGVLLGIISALKKNSILDYISVIIA 135 Query: 138 LTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGN 197 G+S+P F +L+ + ++ NL P A+W Sbjct: 136 TIGFSVPSFILATLLMYIFALKLNLLP------------------------AALW----- 166 Query: 198 FIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALR 257 + A+ ILP+I L +P+A I RM R+++LE L +DYI+TARAKGL+ VI HAL+ Sbjct: 167 --ETPANAILPSISLAFLPMAFITRMVRANLLEELEKDYIKTARAKGLSEKTVIFKHALK 224 Query: 258 NAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMI 317 NA+LPVVT +G + G+ + E IF PGLGR + ++ RDY V+ G + + ++ Sbjct: 225 NAILPVVTYLGPMAAGIFTGSFVIEKIFVIPGLGRDFVTSITNRDYTVIMGLTIFYSVLL 284 Query: 318 ILVNLLVDLLYGVVNPRIRHKK 339 I +NLLVD+ YG ++PRI+ K Sbjct: 285 IFMNLLVDISYGFIDPRIKLGK 306 >UniRef50_Q11KW1 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11KW1_MESSB Length = 322 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/316 (37%), Positives = 188/316 (59%), Gaps = 21/316 (6%) Query: 22 LTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL-GLDKPMWQQYLHYIWGVMHGDLGI 80 L F + M+PGDP ++AGE G++ + E+ GLD+P+ Q Y+ + D G Sbjct: 24 LNFLLIRMVPGDPATVIAGESGMADADFVARIREIYGLDQPLLVQLKTYLVNTLSLDFGH 83 Query: 81 SMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTG 140 S + + V + R AT+ L A IF+ VG+ +GV+A + GS D +++ Sbjct: 84 SYRLQTDVLALIIERLPATIALTGAAFIFSLVVGVSLGVIAGSRPGSKVDVAIQFVSVAL 143 Query: 141 YSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFID 200 YS+P+FW G+MLI++ S+ + P SG TGF +G+ ++ Sbjct: 144 YSVPVFWIGLMLILVFSLKLHWLPASG--------------TGFE------YGQIPGVLE 183 Query: 201 AVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAM 260 ++H++LP I L +AV +R+ R+S+++V +D++RTA++KGL ++ H L NA+ Sbjct: 184 FLSHLLLPMITLSLFYIAVYIRLARTSVVDVTHQDFVRTAKSKGLPSAFILRKHVLPNAI 243 Query: 261 LPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILV 320 LPVVT+ LQ G L++G+I ETIF+WPG+GR +AL +RDY ++ G L+ ATM++L+ Sbjct: 244 LPVVTMAALQAGHLVSGSIAVETIFAWPGIGRLGYEALVQRDYNMLLGVFLVTATMVVLL 303 Query: 321 NLLVDLLYGVVNPRIR 336 NL+ D+LY VV+PRI Sbjct: 304 NLVADVLYVVVDPRIE 319 >UniRef50_A1B070 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Alphaproteobacteria RepID=A1B070_PARDP Length = 312 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 197/337 (58%), Gaps = 25/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++++RRL + + + + L F+ V ++PGDP M G G PE A L ++GLD Sbjct: 1 MLRYVIRRLISLGLSLLVASALIFSVVELVPGDPASFMLGT-GAQPETVAALRQQMGLDL 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +YLH++ GV+ GDLG S + PV + R Q +L L + A+ A + +P+G+ Sbjct: 60 PLPLRYLHWLGGVLTGDLGHSFTYKTPVAGMILDRMQVSLPLALMALALAVLIALPIGMF 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +RG D +G G ++P FW+ M+L++L +V+ P G Sbjct: 120 AAARRGRTGDTAVMGATQIGIALPNFWFAMLLVLLFAVNLRWLPAGGFPG---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 W G A+ ++LPA+ L A++ R+ RS+++E LG+DYIRTA Sbjct: 170 -----------WSHPGA---ALKSLLLPAVALALPQAAILARVLRSALVETLGQDYIRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLT +V+ HALRNA++PV+T++G+Q LLAGAI+ E +F PGLGR + A+ + Sbjct: 216 RAKGLTAGQVLSRHALRNALIPVLTILGMQFSFLLAGAIIIENVFYLPGLGRLIFQAITQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RD VVQ VL++ +ILV LVDL Y +V+PR+R Sbjct: 276 RDLIVVQSAVLVLVAAVILVTFLVDLSYALVDPRLRK 312 >UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter n=3 Tax=Bacillaceae RepID=B1HVT9_LYSSC Length = 313 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 104/318 (32%), Positives = 187/318 (58%), Gaps = 24/318 (7%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDL 78 ++++TF ++PGDPV M G P + L +ELGLD+P+++QY+ ++ G++ G L Sbjct: 18 VSIITFGVFQILPGDPVRTMLGTEA-DPTQIENLRSELGLDRPLYEQYVDWMKGLLTGQL 76 Query: 79 GISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLAL 138 G S++ +PV + R T+ L ++ + +P+G+ AA ++ I D + + Sbjct: 77 GDSIRFSMPVKDLLFDRLPVTMSLAGITLLIVLVISLPLGMFAARRQNKISDVSLSTVTQ 136 Query: 139 TGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNF 198 G ++P FW GMMLI+ V + ++ +SG + W + + Sbjct: 137 IGMAVPSFWLGMMLILYVGLQFSFFKISGYIP---------------------WTQ--SV 173 Query: 199 IDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRN 258 A++ ++LPA+ + +AV R R+++LE + DY+RT R+KG++ V+ H L+N Sbjct: 174 AGALSTLLLPALTIAIPQIAVNFRYVRTAILEQVQLDYVRTIRSKGMSEQNVMYKHVLKN 233 Query: 259 AMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMII 318 +M+P++TV GL + ++AG I+ E +FS PG+G+ LI A+ RD+P+VQG V+ + ++ Sbjct: 234 SMIPILTVFGLIMAEVVAGTIIVEQVFSLPGIGQLLITAISNRDFPLVQGIVMYITVAVV 293 Query: 319 LVNLLVDLLYGVVNPRIR 336 ++N +VD+LY V++PRIR Sbjct: 294 MINFIVDILYSVLDPRIR 311 >UniRef50_A3SZ64 ABC-transport protein, inner membrane component n=4 Tax=Rhodobacteraceae RepID=A3SZ64_9RHOB Length = 316 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 133/337 (39%), Positives = 197/337 (58%), Gaps = 28/337 (8%) Query: 7 RRLGLVIPTFIG---ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 + LG + TF+ +++ +F + + PGDP+ IM G S + L AELGLD+P Sbjct: 4 KALGKIAQTFVVLFVVSVASFGLLKLAPGDPIQIMLGSE-FSQASYDSLRAELGLDQPFL 62 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWE-EFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ + GD G S +R ++ F TL L +++FA VG+P+GVL+A Sbjct: 63 VQYANWAIQFVQGDWGTSYVARAEIFTYAFKEALPVTLTLASFSLLFAILVGVPLGVLSA 122 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +K+ +IFD + LALTG + P F G++LI +V L PV G VS Sbjct: 123 IKKDTIFDAGSAVLALTGTAFPSFLLGILLIWFFAVKLQLFPVMGYVSP----------- 171 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 W NF + HMILP + L T +A+I R+TR++++EVL + YI ARA Sbjct: 172 ---------W---ENFWLGIYHMILPGLTLSTYFIAMITRLTRATLIEVLEQPYIAAARA 219 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G RV+ VH +RN +P+VT++GLQ+G LL G +LTET+F+ PG+G+ L A+ R+ Sbjct: 220 RGEPNWRVVWVHGVRNIAMPLVTILGLQLGVLLQGTVLTETVFNLPGVGQMLTSAVLGRE 279 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 Y VVQ GV++ A + I VNLLVDL Y ++PR+R +K Sbjct: 280 YLVVQAGVMMTAVLFIGVNLLVDLSYPFLDPRLRTRK 316 >UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component n=20 Tax=Bacteria RepID=A0R8T4_BACAH Length = 323 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 184/335 (54%), Gaps = 20/335 (5%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I+RR +IPT G +++ F ++PGD + ++PER +L GL+KP+ Sbjct: 9 YIIRRFLQMIPTLFGTSIIIFFLFALLPGDYI---DSNPKLTPERAQELRELYGLNKPII 65 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 ++Y H++ +HGD G S++ + PV T + V A+ F + + +GV++A Sbjct: 66 ERYFHWLVNALHGDFGFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISAT 125 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 K+ S FD S P F+ G+ LI L++V L P+ G + D + TG Sbjct: 126 KQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVDLKLLPIGGMI------DIGSNSTG 179 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 I ++ + HM+LP +L + + + R R+ ML+V+ +DYIRTARAK Sbjct: 180 IAYI-----------LEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARAK 228 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RDY Sbjct: 229 GLKERTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRDY 288 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 V+ + ++ + I+ N L D++Y V+PRIR K Sbjct: 289 TVLMAFTMFLSCLTIMANFLADIVYAFVDPRIRLK 323 >UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICR7_9EURY Length = 352 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 201/343 (58%), Gaps = 11/343 (3%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPE---RHAQLL-----A 54 +I+RRL I IGITL+TF +H +P D + AG +P A+++ Sbjct: 5 DYIIRRLIFTIFIIIGITLITFILMHALPVDLAAMYAGNPRDNPATEVNEAEMMLKAARE 64 Query: 55 ELGLDKPMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAV 113 + GLDKP+W QY +Y++ + + D+GISM++ PV EE + R ATLEL +++ A Sbjct: 65 KFGLDKPLWVQYGYYLYNLFLKFDMGISMRTHKPVGEEIINRLPATLELIFVSIVIAFVA 124 Query: 114 GIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMV 173 G+ VGV++A K+ DH ++++G S+P FW ++L + P+SGR + Sbjct: 125 GVAVGVISAKKQNKFTDHIMRIISISGVSLPAFWLAILLQFIFGSWMGWFPISGRYDPQL 184 Query: 174 FLDDS-NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 F + +TGF LIDT + G F D H+ILP+I + + P I RMTR+++LEV+ Sbjct: 185 FHQYPFHTITGFYLIDTLVQGNFKMFGDVAWHLILPSIAMASYPFGAIARMTRATLLEVM 244 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 E YI +ARA GL + R+I +AL+NA+ P +T+ GL +L GA E IF W G+G Sbjct: 245 DEQYIYSARAMGLPK-RLITKYALKNALGPTLTITGLNFAYMLTGAFYVEWIFGWGGIGW 303 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 + AL DY V+ G V++V+ ++VNL+VD++ ++PRI Sbjct: 304 FAGMALLNLDYTVIMGMVVVVSLFYVIVNLIVDIIQVYIDPRI 346 >UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease protein n=95 Tax=Bacteria RepID=Q316S1_DESDG Length = 391 Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 189/336 (56%), Gaps = 16/336 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ FI+RR+ + I+ + FA H + GDPV M G ER A L +LGL+ Sbjct: 67 MIAFIVRRVTQALIVMFVISFIGFAIKHSL-GDPVREMVGVSVSVQEREA-LREQLGLND 124 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q+ ++ GDLG S R P E + + ATLEL C+ + + PVGV Sbjct: 125 PYLVQWGRFVKNAAQGDLGQSFFYRKPAMEVILDKAPATLELVFCSTLLILLISTPVGVY 184 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + S +G ++ G S+P+F ++LI + +V + P GR ++ Sbjct: 185 AAYRPNSPLSRFFMGFSVVGVSIPVFLTAILLIYIFAVELHWLPSYGR-------GETVT 237 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L GF W +D + H+ILP+I L +I L + +R+ R+ M EVL +Y++ A Sbjct: 238 LFGF-------WSTGLLTLDGLKHLILPSIALSSIMLPLFIRLIRAEMKEVLETEYVKFA 290 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RV++VHA +N +LPV+TV G+Q+G ++A ILTET+F W G+G I+A++R Sbjct: 291 RAKGLRERRVLMVHAFKNTLLPVITVGGVQIGLMIAYTILTETVFQWQGMGFMFIEAVER 350 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D ++ ++ V + ++VN +VD++YG+VNP +R Sbjct: 351 SDTALLVAYMVFVGALFVVVNTVVDIIYGLVNPMVR 386 >UniRef50_B8FV32 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Desulfitobacterium hafniense RepID=B8FV32_DESHD Length = 314 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 126/336 (37%), Positives = 196/336 (58%), Gaps = 24/336 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+F+LRR VIP TL+ F+ + +IPGDPV+ + GE + E+ A+L +LGLD+P Sbjct: 3 LKFMLRRFLYVIPMLFITTLVVFSLILLIPGDPVLAILGENA-TYEKVAELRQQLGLDQP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY+H++ +HGDLG S+ + V T++L M FA A G+ + + Sbjct: 62 VIMQYIHWLNNAVHGDLGRSLFTGQLVGHAIQQHLAITIQLVAVGMTFAIAGGMFFAITS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 S D+ A L G ++P F M+LI++ S++ N P +G +S Sbjct: 122 IYFPKSWMDYAARFLGTLGTAVPNFLCAMILIIIFSLNLNWLPATGFIS----------- 170 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + D A G+F+ H++LP L +AVI R RSS++E + +YIRTA Sbjct: 171 ----ITDGA-----GSFLK---HILLPGFSLSLAGIAVITRQLRSSLMETMDAEYIRTAY 218 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG R R I H L+NAMLPVVT IGL +GT+L ++ E IF+ PG+G+ +I+A+ +R Sbjct: 219 AKGAGRYRAIFKHGLQNAMLPVVTTIGLLMGTMLGATVVVENIFAIPGMGQLVINAIGQR 278 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 D+ VVQG VL++ M++++N L D++Y +++PRI + Sbjct: 279 DFTVVQGVVLVMIVMVVVINFLTDIVYALLDPRIEY 314 >UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG2_EUBSP Length = 330 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 192/336 (57%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +L + +R+ G + T + +++LTF ++PGDPV I+ G P + A L ELGLDK Sbjct: 16 VLIYAVRKAGTFVITLVLVSILTFGVFQILPGDPVDIILGVEA-DPMQAAALTKELGLDK 74 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++Y +++G + GDLG S++ ++PV + T L V +++ + +P V Sbjct: 75 PIMERYFDWVFGAVRGDLGNSIRYQVPVGDLLKSSLPVTASLAVLSILLTILISVPAAVF 134 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A + G ++P FW G++LIML +V +++ P SG D P Sbjct: 135 LAKNHRKNSAMVLSSVTQFGIAVPSFWIGILLIMLFAVQFHILP-SG---------DYTP 184 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + N I+ + +ILPA + A I+R ++++L+ +G DY+RTA Sbjct: 185 FSE-------------NPIEWLKSLILPACSIAVGTTATIIRYLKNTILDQMGFDYVRTA 231 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG+T+ +V+ H L+NA+LP +T++G+ + +L G+++ E +F+ PG+G L + Sbjct: 232 RSKGMTQKQVLFKHVLKNALLPAITILGMMIVDVLGGSVIVENVFNLPGIGHLLTSGVGN 291 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+P+VQG V +A ++++NLLVD LY VV+PRIR Sbjct: 292 RDFPLVQGLVFYLAITVLVINLLVDFLYTVVDPRIR 327 >UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 Tax=Clostridium acetobutylicum RepID=Q97GJ1_CLOAB Length = 317 Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 191/342 (55%), Gaps = 29/342 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I++RL +IP I + + + + PGD +A ISP+ A++ + LD+ Sbjct: 1 MIRYIVKRLFFMIPIIIITSFIIYMIFTLAPGD----IATSMNISPKEKAEMRHKYHLDE 56 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY +++G HGDLG S K PV + L + I A + IP+G + Sbjct: 57 PKVIQYCKWLYGASHGDLGRSYKLNQPVKSVINKYIWNSFYLQFASFILAILIAIPIGAI 116 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ SIFD +L G SMP F+ G++L+ + N+ PV G + Sbjct: 117 SAIRKHSIFDSGFTVFSLVGISMPTFFLGLILMKWFAADLNIFPVEGMTAT--------- 167 Query: 181 LTGFMLIDTAIWGED----GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 GE+ +D + HM+LP VL + A ++R R+SMLEV+ +DY Sbjct: 168 ------------GENFHGIKRLLDILYHMVLPCAVLTIVNAATLIRYVRASMLEVINKDY 215 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I TA+AKGL VI HAL+NAM+P+VT+ G+ + L GAI+TE IF WPG+G+ +D Sbjct: 216 IITAKAKGLNEKVVIYKHALKNAMIPLVTIFGISIANLFTGAIVTEEIFGWPGIGKLSLD 275 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ +RDYP++ G ++V + + NL D+LY V++PRI++K Sbjct: 276 AVLQRDYPLLMGINMIVVILTFVGNLAADVLYAVIDPRIKYK 317 >UniRef50_C0GHX4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHX4_9FIRM Length = 329 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 115/338 (34%), Positives = 189/338 (55%), Gaps = 10/338 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I+RR+ + I + + I+ LTF + + PG PV A IS ++ +GLD+ Sbjct: 1 MRNKIVRRIAMSILSLLVISALTFFLMELAPGTPVSRYADNPRISRADRERIEKNMGLDR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y ++ GDLG+S + PV +E + R ATL L + + A + +P+G+ Sbjct: 61 PAHIRYFIWLRNAAQGDLGLSYMTGQPVSQEIMARLPATLRLMGASFLVALIIAVPLGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A +R SI D + G S+P FW+G++LI + +V P G+++ D + Sbjct: 121 SATRRHSIVDSVLTAGSYLGLSVPAFWFGLILIYIFAVWLRWLPAGGQMTPWF---DPSV 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F +W + + HMI+P VL +A R RSSML+V+ ++YIRTA Sbjct: 178 FPPFTRPFALLW-------EYIRHMIMPVFVLSLSLVAGWSRYIRSSMLDVINQNYIRTA 230 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +V+ HALRNA+ P+VT++G+ + AGA++ E IF+WPG+GR + A+ Sbjct: 231 RAKGVPERKVLYRHALRNALTPLVTLMGMDLPAFFAGAVIVEQIFAWPGMGRLFLSAVTN 290 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V+ G ++ A +++ NLL DL Y ++PR++++ Sbjct: 291 NDYQVMMGITMITAILVLAGNLLADLFYTRLDPRVKYE 328 >UniRef50_D1TC03 Dipeptide transport protein 1 (ABC superfamily, membrane) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TC03_9BURK Length = 341 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 130/339 (38%), Positives = 188/339 (55%), Gaps = 18/339 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 L + LRRL +P + I +L F ++ + PGD +MAGE G +PE A L + G D+ Sbjct: 20 LPYPLRRLLQALPLVVTIAVLNFFWLRLAPGDLADVMAGEAGAATPEYLAALRHQFGTDQ 79 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+L Y+ + H DLG S + V + R AT L V A++ A G G + Sbjct: 80 PLALQFLAYLDRMAHLDLGWSFRYNESVLRLILERLPATALLMVGALVIALLFGCVAGTV 139 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D LA G++ P+FW G+ML++L S H + P G Sbjct: 140 AAVSRRRSIDIAISILATLGFATPLFWLGLMLMVLFSAHLHWLPAGG------------- 186 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T L T W G D AHM LP L LA+ R+ R+S+LEV G D++RTA Sbjct: 187 ITTPGLAATG-WTRVG---DIAAHMALPVFCLAAYYLAIYARLMRASVLEVAGLDFVRTA 242 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+R I H + NA+LP+VT+ LQ GTL +G++ ET+FSWPGLG+ +DA+ Sbjct: 243 RAKGLSRAATIRAHVVPNALLPIVTMTALQFGTLFSGSVAIETVFSWPGLGQLALDAVAS 302 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD ++ G +L + ++++VNL + L YG +PRI ++ Sbjct: 303 RDLNLLLGILLFSSVLVLIVNLAMGLAYGWFDPRIEEQR 341 >UniRef50_Q0FJT7 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Rhodobacteraceae RepID=Q0FJT7_9RHOB Length = 308 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 116/314 (36%), Positives = 182/314 (57%), Gaps = 25/314 (7%) Query: 24 FAFVHMIPGDP--VMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGIS 81 F +H+IPGDP +++ G P+ A L ++GL+ P+WQQY+ ++ GV+ GDLG S Sbjct: 14 FLLLHLIPGDPAELLLSQGNVAADPQAVAALREQMGLNAPLWQQYIDHMTGVLTGDLGAS 73 Query: 82 MKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGY 141 + PV E+ R TLE+ + A + AT +G+P+G AA++ D A Sbjct: 74 FRDGAPVIEQIALRLPRTLEVILAASLIATGIGVPLGTYAAIRADGKADAVISFFASASL 133 Query: 142 SMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDA 201 S P+F G ++I++ + P G T F ED Sbjct: 134 STPVFVVGSVVILIFAQKLQWLPAGG-------------FTPF--------SEDPLE--H 170 Query: 202 VAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAML 261 + ++LPA + LAVI RM+R+S+LEVL DY+RTARAKGL R ++ H +RNA++ Sbjct: 171 LQLLLLPACTVALSLLAVITRMSRASVLEVLQRDYVRTARAKGLPRNPILRRHVVRNALI 230 Query: 262 PVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVN 321 PV+TV+GL++GTL+ G +L E +F+WPGL +L+ A+ RDYP V G V+ ++ + + +N Sbjct: 231 PVLTVLGLEMGTLIGGTVLVEFVFNWPGLSGYLVAAVDARDYPEVVGIVMTISVLFVFLN 290 Query: 322 LLVDLLYGVVNPRI 335 L+VD++ +++PRI Sbjct: 291 LVVDVVNALLDPRI 304 >UniRef50_C1SMU0 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=3 Tax=Bacteria RepID=C1SMU0_9BACT Length = 310 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 106/341 (31%), Positives = 187/341 (54%), Gaps = 33/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLA--ELGL 58 M FIL+R+GL+IP ++++ F + + P DP + I P + A + ELGL Sbjct: 1 MAAFILKRIGLLIPIMFAVSVIVFGVLRLGPIDPALAYLLNSRIPPTQEALEVTRVELGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +KP+ +QY+H++ D G S ++ V+ + + F TL+L +M+ + IP+G Sbjct: 61 NKPLVEQYVHWLKNAAVLDFGKSYTTKRDVFGDLMYYFPTTLKLACTSMLVVILLSIPMG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AA++R IFD+ ++ G S P FW G +L+ +V L P Sbjct: 121 IAAALRRNRIFDNIVKLISFIGVSTPSFWLGFILMYFFAVKLQLLPA------------- 167 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +GE G V I+P + L + +A+ R+TR+S LE + + Sbjct: 168 -------------FGEHG-----VLSYIMPILTLSFMSIAINTRLTRTSFLEHFNQRSVT 209 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR G++ +++ + L+N+MLP+VT G+ G LL GA++ ET+F+WPG+GR+++ ++ Sbjct: 210 YARVMGVSEKKIVSKYTLKNSMLPIVTSFGMHFGELLGGAVVVETLFAWPGVGRYVVSSI 269 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYPV+Q ++L+ + +++NL D++Y +NP+IR++K Sbjct: 270 HNHDYPVIQCFMILMTAIFVIMNLATDIVYAYLNPKIRYEK 310 >UniRef50_Q28NH1 Binding-protein-dependent transport systems inner membrane component n=56 Tax=Proteobacteria RepID=Q28NH1_JANSC Length = 338 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 131/341 (38%), Positives = 200/341 (58%), Gaps = 14/341 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +ILRR+ I + + L+ FA + GDPV M G+ + E +L LGL+K Sbjct: 1 MLSYILRRVFQSILVLLVVGLVAFAMFRFV-GDPVDTMLGQER-TMEDVERLREVLGLNK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ + GD GIS + PV E R ATLEL + + + A GI +G+ Sbjct: 59 PFFLQYWDFLVRAVQGDFGISYRQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRV--SDMVFLDDS 178 A++R + + + ++L G S+P F G++LI V ++ R+ +D F ++ Sbjct: 119 TAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDI-----RIPFTDTTF--NT 171 Query: 179 NPLTGFMLIDTA-IWGEDGNFI--DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 + F DT I+G F D V +ILPAI LG + +I+R+ R+ MLEVL D Sbjct: 172 GGMPTFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRAD 231 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 YIR ARA+GL+ + HAL+N M+PV+TV GLQ+G+++A AI+TET+F WPG+G I Sbjct: 232 YIRFARARGLSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFI 291 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +A+Q D PV+ ++L++ M + +NL VDLLY ++PR+R Sbjct: 292 NAIQFVDIPVMAAYLMLISVMFVGINLAVDLLYVAIDPRLR 332 >UniRef50_C1VE95 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VE95_9EURY Length = 320 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 114/336 (33%), Positives = 193/336 (57%), Gaps = 23/336 (6%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 ++ +R G + T I I+L+ F ++PG+ +++ G++ S E A + +LGL++P + Sbjct: 7 YLAKRFGYIGVTLILISLIVFGVTQLLPGNAAVMILGKQATS-ESIAAIEQQLGLNRPWY 65 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QYL ++ G + G+ G S ++ PV PR + +L + + T IP+GVLAAV Sbjct: 66 VQYLDWLGGFVTGNWGTSFANQQPVTAIIFPRLVRSAQLAIVTLTLVTVTAIPLGVLAAV 125 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 K+ SI+D A G S+P F G + I L + G V ++ PL+ Sbjct: 126 KQDSIWDLLASVGGYVGVSLPEFVIGTLFITLFA---------GPVFQILPFGGYEPLSA 176 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 ++ W + HMILP++ L I A ++R+TRS ++EVL EDY+R+AR K Sbjct: 177 GIVT----WAK---------HMILPSVTLSIILTAHVMRLTRSEIVEVLREDYVRSARLK 223 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+ ++V+ H LRN +LP +T++ L +G LL ++ E +F++PGLGR L+ ++Q R+ Sbjct: 224 GLSELKVLTKHTLRNGLLPTITLLALNIGYLLGSIVIVEEVFTFPGLGRLLVRSIQTRNL 283 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 PV+Q V+L+A + + NL D++Y ++PRI + + Sbjct: 284 PVLQASVMLIAIVYTVTNLAADIMYTYLDPRIEYGE 319 >UniRef50_Q6D2Y2 ABC transporter permease protein n=2 Tax=Pectobacterium RepID=Q6D2Y2_ERWCT Length = 318 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 195/332 (58%), Gaps = 24/332 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 FI RL +IP + ++++ F VH+ PGDPV+++ G SP A L ++GLDKP+ Sbjct: 4 FIFHRLLALIPVLLVVSIVVFCLVHLAPGDPVLVILGNDA-SPGDVAALRQQMGLDKPLL 62 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q++ + + GDLG S+ V F+ Q TL L + A A +G+ GV++A Sbjct: 63 AQFVVWFGAALRGDLGHSLFMNASVMSLFLQHLQPTLALALYAQGLALLLGLAAGVISAA 122 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 ++G + D +GLA G S+P F G+ LI +V PV G S G Sbjct: 123 QQGRLLDRLIMGLAAVGMSIPGFLLGLFLIFFFAVQLRWFPVVGYSST----------RG 172 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 +L++ +W +M LPA+ LG A+I RMTR+ ML+VL E+YI+TARAK Sbjct: 173 DVLVN--LW-----------YMTLPALALGLRIAALIARMTRAVMLDVLSENYIKTARAK 219 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G++ RV++ H L+NA+LP++T+ G G+L+ G I+ E++F PG+G ++D+++RRD+ Sbjct: 220 GVSEYRVLLRHGLKNALLPILTICGESFGSLVTGTIVIESVFGIPGVGSLVVDSIERRDF 279 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 V+QG VLL+ +L+NL VD+L V+PRI Sbjct: 280 SVIQGAVLLITISYVLINLAVDILGHAVDPRI 311 >UniRef50_C5A565 Oligopeptide/dipeptide ABC transporter, permease protein (OppD/dppB) n=13 Tax=Archaea RepID=C5A565_THEGJ Length = 333 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 120/335 (35%), Positives = 195/335 (58%), Gaps = 7/335 (2%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F++RRL IPT IG+TL+ F ++IP DP AG +PE ++ + ++ P Sbjct: 6 KFLVRRLLTFIPTIIGVTLIVFIIAYVIPADPARAWAGGEKATPEAIQKIKEQYHMNDPW 65 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 ++QY I G+ + + ++ V+++ RF T EL + A F +G+P+G+LAA Sbjct: 66 YEQYWFLISGLAKNKI-VDPRTSNYVFDDIGKRFPVTFELTLVAFFFILIIGLPLGILAA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +KR + D ALTG SMPIFW G ML+ + V W + ++G + ++ +T Sbjct: 125 LKRNTWVDTLVRIFALTGVSMPIFWLGYMLMYIFFVKWRVITLAGFPAP-----PAHEIT 179 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 +ID + G+ F + + LP + LG V+ R R+S LE L DY+ +A Sbjct: 180 HIPMIDALLTGDFKIFSQHLNRLWLPGLTLGFTGSGVLARFVRNSFLEALSSDYVAFLKA 239 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG+ ++R I HAL+NA++P++TV+GLQ G LL G +TET+F PG+G +++DA++ D Sbjct: 240 KGVPKLR-IYRHALKNALVPILTVLGLQFGGLLGGTPITETVFGLPGMGSYVLDAIRNLD 298 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +P V + A + + NL+VD+LY VV+PR+R+ Sbjct: 299 FPAVVAITFIFALIFVTTNLIVDILYAVVDPRVRY 333 >UniRef50_Q5V0Q6 Oligopeptide ABC transporter permease protein n=1 Tax=Haloarcula marismortui RepID=Q5V0Q6_HALMA Length = 317 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 185/337 (54%), Gaps = 25/337 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV-MIMAGERGISPERHAQLLAELGLDKP 61 +FI R+ +P G+++LTFA VH+ PGDP+ ++A IS A + A GLD P Sbjct: 5 RFIAVRVAATVPILFGVSVLTFALVHLTPGDPIDQMVALNPQISAAEEAAIRARYGLDGP 64 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +WQQYL +I V+ GDLG + PV + R T+ LG+ A + IP G+ A Sbjct: 65 VWQQYLTWIGNVLQGDLGTVISVDQPVLPYIMARLPETIALGLFGWAIALLISIPTGIYA 124 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV + ++ D + AL+G S+P FW G+MLI++ ++ +L PV L PL Sbjct: 125 AVNKDTLGDDLSRVFALSGISLPNFWLGLMLILVFALWLDLWPV---------LAPDRPL 175 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 L +W +++LP + +GT A ++R+ RSSM E + + Y+ AR Sbjct: 176 ----LSPEMLW-----------YLVLPGVTIGTASSATLMRVMRSSMAEEMNKQYVTAAR 220 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V++ H LRN+++ V T+ ++ AGA++ E +F+WPGLGR + A+ R Sbjct: 221 AKGLPERTVVLKHVLRNSLISVTTIAAFLTASIFAGAVVVEQVFAWPGLGRAFVGAIVGR 280 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + ++ L IIL NLL D+ Y +++PRIR+ Sbjct: 281 EVDLIMAITLFTGVTIILANLLADIAYALLDPRIRYD 317 >UniRef50_B2A0S4 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0S4_NATTJ Length = 329 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 15/336 (4%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+LRR+G VI + + + F ++PGDP M + +S E + GLD+P+ Sbjct: 9 RFVLRRIGQVIISLFIVATIVFFLFRLLPGDPTAAMM-QPEMSSEAQEMIRERFGLDRPL 67 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 +QYL Y+ ++ GD GIS R+PV + TL L A+ A G+ +G L + Sbjct: 68 HEQYLAYMVNLLQGDFGISFHYRLPVSQVIGTYILNTLWLMFSAIAVAYIGGVLIGGLMS 127 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 RGS + G L S+P F+ GM+ IM+ S ++ L P SG S +NP+ Sbjct: 128 WYRGSRLETFLSGGVLFCRSLPPFFLGMVGIMVFSFYFELLPHSGMRSP-----GANPV- 181 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 GF ++T + +D + H+ILP + LA + R++MLE+ G D++ ARA Sbjct: 182 GF--VETYLN------LDFLYHLILPVAMSSLYYLARPTLIMRNNMLELRGADFVELARA 233 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL + RVI +HA RNA+LPV+T + L +G + A+ E +F WPGLGR ++ A Q RD Sbjct: 234 KGLRQSRVIYLHAARNAILPVITNLALFLGMAIGAAVAVEYVFGWPGLGREMVRAAQLRD 293 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP+ Q L++A ++++NLLVD+LYG ++PRI ++ Sbjct: 294 YPLAQACFLMLAAKVMVLNLLVDILYGYLDPRITYE 329 >UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=2 Tax=Bacillaceae RepID=B1HP02_LYSSC Length = 476 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 185/338 (54%), Gaps = 31/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 LQFI+ R+ +G+ L F +++ P DP + G + E+ A GLD+ Sbjct: 166 FLQFIIERILQSFIVIVGVATLVFTILYLSPFDPARNLLGVEA-TAEQIANFNRIHGLDQ 224 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q H + G+ DLG S + + +F TLE+ V +++ A A+ IPVG++ Sbjct: 225 PYLSQLWHSLSGLFTFDLGTSFAGKEDITHSITNKFPVTLEIAVLSLLMAIAIAIPVGII 284 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+ S D+T + +AL G S+P FW G++ I+ ++ P + NP Sbjct: 285 SAVRPNSYLDYTFMFIALIGLSIPSFWQGLIFILTFALKLQWFPAT-----------YNP 333 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 W +I+P IVLGT A I RMTRSSMLEV+ EDYI TA Sbjct: 334 QN---------W----------LSLIMPVIVLGTSITASIARMTRSSMLEVIHEDYIITA 374 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL +VI HA+RNAM+P++TVIGL G +L GA +TE +F+ G+G +++D Sbjct: 375 KAKGLNEFKVISKHAIRNAMIPIITVIGLLFGGMLGGASVTEKVFNISGIGSYIVDKQFI 434 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P + GGV+ +A I +VNLL+D++Y +PRIR K Sbjct: 435 PDIPAILGGVVYIAITISIVNLLIDIMYAFFDPRIRSK 472 >UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B9JKG6_AGRRK Length = 336 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 131/363 (36%), Positives = 200/363 (55%), Gaps = 52/363 (14%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--GISPERHAQLLAELGL 58 M F LRRL +PT + I+ + FA + + P +P G+ I PE Q+ A LGL Sbjct: 1 MFNFTLRRLFFAVPTLLVISFVIFALLDLAPNNP----TGDLPLTIPPEVREQIRAALGL 56 Query: 59 DKPMWQQYLHYI-------------------WGVMHGDLGISMKSRIPVWEEFVPRFQAT 99 D+P +YL ++ +G H +S +R PV + V R T Sbjct: 57 DQPFLIRYLRWLHQFFINEPLNILEQITGWQFGDGHRLRVLSWATRSPVVDLVVQRMPQT 116 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS-- 157 L + + +F + IP+GVL+A K+ SIFD +++ GYS+P F+ G++LI++ S Sbjct: 117 LWVVGLSYLFGVLLAIPIGVLSAYKQYSIFDQIGTFISMVGYSVPTFFTGVLLIVVFSSY 176 Query: 158 VHW--NLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTI 215 +HW ++ + RV+D W +F+ V M LP +VL Sbjct: 177 LHWFPSVYDTNLRVTD--------------------WS---SFVAQVKQMFLPVMVLTLY 213 Query: 216 PLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLL 275 ++ I R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ Sbjct: 214 NVSHISRFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIF 273 Query: 276 AGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 +GAI+TE +F GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRI Sbjct: 274 SGAIITEQVFRVNGLGQLLIVAVQGGDIPMVQTLTFIFAVLIVLFNLIADVLYGILDPRI 333 Query: 336 RHK 338 R+ Sbjct: 334 RYD 336 >UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax=Bacteria RepID=Q5SHU7_THET8 Length = 336 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 129/350 (36%), Positives = 198/350 (56%), Gaps = 26/350 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 M + +RRL +IP +++ +A + + PGDP+ + + ++ E+ L GLD Sbjct: 1 MFAYTVRRLLQMIPLLFAASVVIYALLALQPGDPLDELRRQNPRMTAEQFEALKRAYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEE-FVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ +Y ++ + GDLG S IP E FV R TL L A+ A V IPVG Sbjct: 61 QPLHIRYFKWLNRALRGDLGYSRTYGIPAAEYVFVQRLPKTLILSGLALTLALVVAIPVG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS---------GRV 169 V +AV++ S+ D+ L+ G+SMP+F+ G++L+ L ++ + P S G V Sbjct: 121 VFSAVRQYSLADYAITFLSFVGFSMPVFFLGILLLYLFAI---VLPESIPGFPRFPTGGV 177 Query: 170 SDMVFLD-DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSM 228 +++ D S ++ + + W H++LP + L + +A R R+S+ Sbjct: 178 PGVLWEDVRSGAVSLWEFLGQWAW-----------HLVLPVLTLSALQMAEWTRFMRASL 226 Query: 229 LEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWP 288 LEVL +DYIRTARAKGL V+ HALRNA++P+VT++GL + +L GA +TETIFS+P Sbjct: 227 LEVLSQDYIRTARAKGLAERVVLYKHALRNALIPIVTLVGLAIPGVLGGATITETIFSYP 286 Query: 289 GLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 G+GR + DAL +DY V + +A M L NLL DL Y VV+PRIR+ Sbjct: 287 GMGRAIFDALVEKDYNVAMAALAFLALMTALFNLLADLAYAVVDPRIRYS 336 >UniRef50_D1C2E3 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=D1C2E3_SPHTD Length = 314 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 215/338 (63%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + + +++ FA V +IPGDPV IM GE +SPE +L+ + GLD+ Sbjct: 1 MTRYIVQRLVQAVGVVLLVSVFVFALVRLIPGDPVSIMLGE-NLSPEVERELIRKWGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QY+ ++ ++ GDLG S++++ V + R AT L V AMI A +GIP GV+ Sbjct: 60 PIFEQYVAWLANLVRGDLGQSIRTQESVGQLIAARIPATSMLAVGAMIIAIGIGIPAGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + + D+ A+ AL G +P FW G++L++L S+ PVSG VS LDD Sbjct: 120 AAYRANTGLDYAAMLAALVGLCVPSFWLGLLLMLLFSLRLGWFPVSGYVSP---LDDLGA 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ H++LPA+ LG A I RMTRS+ML+VL +DY+RTA Sbjct: 177 --------------------SLRHLVLPALALGVGLSASISRMTRSAMLDVLRQDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ ++ HALRNA++P +TVIGLQ+G LL G+++ E IF +PG+G+ L+ A+ Sbjct: 217 RAKGLSERATVLGHALRNALMPTITVIGLQLGFLLGGSVVVEEIFGYPGVGQLLVFAINN 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QG V++ A ++VNLLVDL Y ++PRI++ Sbjct: 277 RDYPLIQGVVMIFALTFVIVNLLVDLSYAYLDPRIKYS 314 >UniRef50_B8J041 Binding-protein-dependent transport systems inner membrane component n=11 Tax=Bacteria RepID=B8J041_DESDA Length = 344 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 120/324 (37%), Positives = 184/324 (56%), Gaps = 18/324 (5%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL-GLDKPMWQQYLHYIWGVMHG 76 GITL++F +H+ PG P + ++ E Q L L GLD+P+ QY ++ ++H Sbjct: 34 GITLISFWVIHLAPGSPTDMETTLNPLAGEAARQRLEALYGLDRPLHVQYADWLLRLLHF 93 Query: 77 DLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVG 135 D G SM + PV + + R T+ + V AM+ + IPVG+++A +R S+ D + Sbjct: 94 DFGNSMSADSRPVLTKIMERLPLTVGMNVTAMVLTLLIAIPVGIISACRRNSLLDRSVTV 153 Query: 136 LALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGED 195 L G++MP FW ++L++L + P+SG LT ++WG+ Sbjct: 154 LVFLGFAMPSFWLALLLMLLFGIELQWLPISG-------------LTSMHYEQLSLWGK- 199 Query: 196 GNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHA 255 F D H+ LP +V LA + R R+ MLEVL +DYI TARAKGL +I HA Sbjct: 200 --FCDLAKHLALPILVYTVGGLAGMSRYMRACMLEVLQQDYILTARAKGLGEKAIIWRHA 257 Query: 256 LRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVAT 315 LRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ RDY ++ G ++L A Sbjct: 258 LRNALLPVITLLGLSVPGLIGGSVIIESIFALPGLGQLFYAAVMARDYTMIMGNLVLGAV 317 Query: 316 MIILVNLLVDLLYGVVNPRIRHKK 339 + + NLL D+ YG+ +PRIR K Sbjct: 318 LTLFGNLLADICYGLADPRIRSAK 341 >UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligopeptide) n=15 Tax=Alphaproteobacteria RepID=B9JSV0_AGRVS Length = 336 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 132/361 (36%), Positives = 201/361 (55%), Gaps = 48/361 (13%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--GISPERHAQLLAELGL 58 M + +RRL IPT + I+ + FA + M P +P+ G+ I PE Q+ A LGL Sbjct: 1 MFTYTIRRLLFAIPTLLIISFIIFALLAMAPNNPL----GDLPLTIPPEVREQMRAALGL 56 Query: 59 DKPM------W--QQYLHYIWGVMHGDLGISMKS-----------RIPVWEEFVPRFQAT 99 D+PM W Q +++ + G+++ S R PV + V R T Sbjct: 57 DQPMIVRFFLWLKQFFINEPLNIFEQITGLTVGSGQRLRVLSWTTRSPVVDLIVQRMPQT 116 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVS-- 157 L + + +F + IP+GV++A K+ SIFD +++ GYS+P F+ G++LI++ S Sbjct: 117 LWVVGLSYVFGVLLAIPLGVISAYKQYSIFDQIGTFVSMVGYSVPTFFTGVLLIVIFSST 176 Query: 158 VHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPL 217 +HW V D T ++D W +F+ V M+LP +VL Sbjct: 177 LHW-----FPSVYD----------TNLQVVD---WT---SFVAQVKQMVLPVMVLTLYNT 215 Query: 218 AVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAG 277 + I R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ +G Sbjct: 216 SQISRFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIFSG 275 Query: 278 AILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 AI+TE IF GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 276 AIITEQIFRVNGLGQLLITAIQSGDLPLVQTLTFIFAVLIVLFNLIADVLYGILDPRIRY 335 Query: 338 K 338 Sbjct: 336 D 336 >UniRef50_A3VG50 Dipeptide transport system permease protein dppB n=2 Tax=Bacteria RepID=A3VG50_9RHOB Length = 336 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 127/339 (37%), Positives = 189/339 (55%), Gaps = 15/339 (4%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 ++L+RL L+IP IG++L+ F + ++PGDPV+++ E + A LGLD+P+ Sbjct: 6 YVLKRLLLLIPVLIGVSLIAFFLIRLLPGDPVLLIVPETATEADIAAAR-ERLGLDQPIL 64 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QYL Y+ G + GD G S+ + + + R TLEL + +M A + + GV AA Sbjct: 65 TQYLSYVGGALTGDFGTSITTNRSISADLAQRIPLTLELLIYSMAVALVLAVIGGVAAAR 124 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPV-SGRVSDMVFLDDSNPL- 181 + D AL G S+P FW G+MLI+L ++ P SGRV +D + P Sbjct: 125 HWHKLPDKVLRFAALFGNSVPEFWLGLMLILLFYQGLHVAPPPSGRVD----MDLAVPTH 180 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TGF+LIDT I G F+ A+ H++LP L A ++R R+S LEVL D R A Sbjct: 181 TGFILIDTLIAGNGKAFLSALHHLMLPVATLAITVTAPLLRSVRASALEVLASDNYRCAA 240 Query: 242 AKGLT----RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 A GL R R ++ L LP ++ I G LL G++L E +FSW GLG+W + Sbjct: 241 AHGLAPRVLRQRYLMRQTLTR--LPALSAIVF--GNLLGGSVLIEYVFSWQGLGQWALRG 296 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +Q RDYPV+Q VL+ AT +L+ LL D++ ++PR++ Sbjct: 297 MQVRDYPVIQAFVLVAATTYVLIFLLADVIQAALDPRVK 335 >UniRef50_B9L3G1 Dipeptide transport system permease protein DppB n=2 Tax=Thermomicrobia (class) RepID=B9L3G1_THERP Length = 310 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 122/338 (36%), Positives = 187/338 (55%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M Q+I RRL +VIPT I I+L+TF +H PG P+ A + + P L + GLD Sbjct: 1 MAQYIARRLLMVIPTLIAISLITFIIMHATPGSPMQPSAPQANPLPPAAQEALAKKYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 KP+WQQYLHY+ + D G S + + V E +L LGV AM A +GIP+G Sbjct: 61 KPLWQQYLHYLRNIFTLDFGFSYQYQTREVREIMATTLPVSLHLGVMAMALAILIGIPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V+AA+ + D+ +A G ++P F + LI+L+ + + P +G Sbjct: 121 VIAAINQNGPVDYLCSFIATLGVAVPNFILALFLIVLLVLLIPIIPRTGG---------- 170 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 W D+ +LP + L P+ +I R TR+SM+EVL +D+IR Sbjct: 171 -------------W-------DSPIDWVLPTLALSLGPIGIIARYTRASMVEVLRQDFIR 210 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA AKGL+ +VI+ H L+N ++P +T++G + G+ E IF PG+GR+ +D+L Sbjct: 211 TAYAKGLSDRQVIVRHVLKNGLIPPITILGPMFAAIGTGSPFVEKIFRVPGMGRFFVDSL 270 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++ +L+ + ++N++VD+LYGVV+PRIR Sbjct: 271 IARDYPMIMAVILIYGAFLAIMNIVVDILYGVVDPRIR 308 >UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Tax=Proteobacteria RepID=Q48E35_PSE14 Length = 315 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 113/336 (33%), Positives = 189/336 (56%), Gaps = 27/336 (8%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +FIL+R ++P GI+L+TF V IPGDP I+ G R +P+ A + A+ GLD+P+ Sbjct: 7 RFILQRPLQLLPVLFGISLVTFILVRSIPGDPARILLGARS-TPQALANIRAQYGLDEPL 65 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 W QY++++ ++ GD+G S+ +I V + V R + T+ L +++ A + +P+ +AA Sbjct: 66 WTQYVYFMKNLLQGDMGKSLLYKIDVLKLIVTRLEPTVFLVCGSVLLALLIAVPLATVAA 125 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 GS D+ TG MP FW G+MLI+L SV PVSG SD Sbjct: 126 RNNGSWGDNLIRVFTTTGLGMPAFWLGIMLILLFSVQLGWFPVSGYGSD----------- 174 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ++D V HM+LP + + AV++R R+SML L D++ ARA Sbjct: 175 ---------------WLDKVHHMVLPCLTIALALSAVLIRNLRASMLMELQADHVTAARA 219 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G++ V H L N+++P + ++ + +G L++G ++ E++F+ PG+G+ L+ + RD Sbjct: 220 RGVSEGAVFRRHVLPNSLVPSINLLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFSRD 279 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Y VVQG +++A ++VN L D+ ++PR+ K Sbjct: 280 YMVVQGVAMVLACATVIVNFLADVATVAIDPRVNIK 315 >UniRef50_UPI0001C31B38 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31B38 Length = 322 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 123/341 (36%), Positives = 199/341 (58%), Gaps = 22/341 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP-GDPVMIMAGERGISPERHAQLLAELGLD 59 M+++++RR + + ++LLTF +++P GDP ++ AG R SPE AQ+ +LGLD Sbjct: 1 MIRYVVRRALWSLVLLLFVSLLTFVLFYVLPSGDPALLRAG-RNASPEALAQIRRQLGLD 59 Query: 60 KPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QY ++ V+H DLG S + PV R AT+ L + A++ A+ IP+G Sbjct: 60 EPLPVQYWTFLKALVLHFDLGYSWYNDAPVKSLIADRLPATISLTLGAVVLWLAIAIPIG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A+ R + D +G AL S P++W G++ + L + P+ + V L D Sbjct: 120 IVSALHRRTWADRLFMGGALIAVSAPVYWVGLVALYLFADDIGQFPLLPGANSYVALTD- 178 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 D W ++LP +VL AV RM R S++E + D++R Sbjct: 179 ---------DPGAW---------FGALLLPWLVLAGAFAAVYARMLRGSLIETMSLDFVR 220 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG++ RV++ H +R A+ PVVT++G+ +G LL GAIL ET+F+ PG+GR DA+ Sbjct: 221 TARAKGISERRVVLRHGVRVAITPVVTLLGVDIGVLLGGAILVETVFNIPGIGRLGFDAI 280 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 D+PV+QG VLL A +++ NL+VDL+Y +++PR+R+ Sbjct: 281 DHADFPVIQGTVLLAALCVVVANLVVDLVYALLDPRVRYDA 321 >UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease protein n=5 Tax=Bacteria RepID=Q73N80_TREDE Length = 317 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 116/337 (34%), Positives = 188/337 (55%), Gaps = 22/337 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+++++RL + IPTF+GIT T+ + M G P+ + I+ + LGLD+P Sbjct: 3 LKYVIKRLLIAIPTFLGITFFTYLILSM-AGSPLDAYLADPRITVMELERKRNSLGLDQP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ + DLG S +S+ PV + R T L ++I + + IP+G+ + Sbjct: 62 IIIQYFIWLKNFFNMDLGFSFQSQRPVTQMIFERMGITALLAGSSLILSLLISIPLGIFS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A K S DH + + + P F+ G++LI ++ L P G D S Sbjct: 122 ASKPNSFRDHASSAFSFILVATPNFFMGLILIYFCAIKLRLLPSGG------LFDASGKK 175 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 T ML+ HMILP +VL + +R R SMLEVL EDYI TAR Sbjct: 176 TTLMLLK---------------HMILPTLVLSFQQIGSWMRYMRGSMLEVLQEDYITTAR 220 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL R ++ HAL+N+++P++TV+G+ + +L+ GA++TE +F WPG+G ++ A+ + Sbjct: 221 AKGLKRNQIYYTHALKNSLIPIITVVGMSIPSLVGGAVVTEQVFGWPGIGTLMVQAINAK 280 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+ G + ++ +++ NL+ DL YG+V+PRI +K Sbjct: 281 DYPVIMGITVNISIAVLIANLITDLAYGLVDPRISYK 317 >UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligopeptide transport n=7 Tax=Bacteria RepID=Q2CJ72_9RHOB Length = 320 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 116/339 (34%), Positives = 193/339 (56%), Gaps = 25/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI---SPERHAQLLAELG 57 ML +I RRL +IP I I+ L + + + PGD V M I PER +L LG Sbjct: 1 MLTYIARRLLTLIPMAIAISFLIYLGLDLTPGDAVSHMIPPDVIGTMDPERLDELRESLG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L KP +Y +I GV+ GD G S+ + + + F+ R ATLEL A++ +T +G + Sbjct: 61 LGKPFLVRYWIWITGVLQGDFGYSLAGGVQISKIFLDRLPATLELSCAALVISTILGSIL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G ++A+ RG+ D + + G S+P F++G++ I++ +++ PV GR Sbjct: 121 GTISALTRGTFADQALTVVGMLGVSIPEFFFGLVAILVFALNLGWLPVGGRT-------- 172 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 L G+ +F D + H+I+PA+VL + A ++R RSSML+ L D+I Sbjct: 173 ---LPGY-----------DSFWDRLPHLIMPALVLSIMMTAGVMRYARSSMLDALSRDFI 218 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTAR+KG+ RV ++H R A+ PV+ +IG ++ L+ G+++ E +F WPG+G+ + A Sbjct: 219 RTARSKGMPEWRVNLLHGFRVALTPVIVLIGFRLPVLIGGSVIIEQVFQWPGIGKEFLSA 278 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 ++ +DYP+V L ++L +L+VD+L +++PR+R Sbjct: 279 VRSQDYPLVMMVALFSVMAVLLASLIVDILTALIDPRVR 317 >UniRef50_A6TTE0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTE0_ALKMQ Length = 323 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 121/338 (35%), Positives = 185/338 (54%), Gaps = 15/338 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RR+G++ + I + F +PGD + + + PE G + Sbjct: 1 MLKYIARRVGIMTVMILLIATMIFFLFRAMPGDATAYIV-DPSMPPEAREIARERYGFND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY ++ ++ D G S PV R ATL L + AMIF+ +GI G Sbjct: 60 SKWVQYTIFMKDLVRLDFGNSYFYGRPVMSLIGERLPATLILMLTAMIFSYIIGIFGGAW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A KRGS + + +L S P FW G+M+I+L + P G ++ Sbjct: 120 MAWKRGSKLESAGITFSLIFRSAPTFWVGLMMILLFAAKLRWVPAQGM--------RTSG 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG DT + E +D + H+ILP++V G +A + + R+SMLEVL EDYI A Sbjct: 172 YTG----DT--FAEIFLNLDFLRHLILPSLVAGLYFIATPLLIMRNSMLEVLSEDYIEMA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL ++ HA RNA+LPVVT L +G+ + G +L E +FSWPGLGR ++ A+ R Sbjct: 226 KAKGLKERTILYKHAARNALLPVVTAGALFIGSAIGGQVLIEYVFSWPGLGREIVQAVTR 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+ QG ++++ M++++NL+ D+LY V++PRI +K Sbjct: 286 RDYPLAQGAFIIISAMLMMMNLVADILYAVLDPRISYK 323 >UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA13_9FIRM Length = 321 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 112/337 (33%), Positives = 182/337 (54%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I +R + + F + + PGDP+ IMAG + E L + GLDK Sbjct: 1 MKRYIGKRALSGLLVVLLSVCFNFTLIRLAPGDPIRIMAGTDNPNEEMIEALQQKYGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +Q++ ++ V GDLG S S V + + TL L + A++ + +G +G+ Sbjct: 61 SIPEQFVMFLGNVAKGDLGYSYISDESVIKLIGEKIGPTLALSLTAVLLSVTIGTLIGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS FD ++ + P FW G+M+I++ + P SG MV L + Sbjct: 121 AARKNGSKFDQFVCSISYVFDATPGFWLGLMMILIFASTLKWFPTSG----MVNLRAN-- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GF F D H++LP + R+ RSS+L+V+ ED+I T Sbjct: 175 YKGF-----------AYFADVCRHLVLPITTMVLTQTPYYFRIARSSVLQVMSEDFITTF 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +A G+ R+ + LRNA+LP VTV+G+ + LL+G++L ET+F+WPG+GR + ++ + Sbjct: 224 KATGMKESRIFNKYVLRNAILPTVTVLGMSLAFLLSGSVLIETVFAWPGMGRLMFSSISK 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+ G L+ + +I + +LVD+LYG ++PRIR+ Sbjct: 284 RDYPVLTGIYLVTSVVICIAMILVDILYGFIDPRIRY 320 >UniRef50_Q11Q48 Dipeptide ABC transporter, permease component n=2 Tax=Flexibacteraceae RepID=Q11Q48_CYTH3 Length = 351 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 184/343 (53%), Gaps = 55/343 (16%) Query: 30 IPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGV----MHGD-------- 77 +PGDPV +MAG+R R A + ELGLD P+ +Q HYI + +H D Sbjct: 30 LPGDPVNMMAGQRTDVATREA-IAKELGLDLPIHKQLFHYINDLSLVSIHEDTPKNQNKY 88 Query: 78 -------------------LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 L S +S V E V T L + AM FAT +GI +G Sbjct: 89 DYTPLLHAGKQVVVWKIPYLRRSFQSNKLVSEIIVENVAGTFWLALSAMSFATIIGICLG 148 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + A++++ S+ DH+ + ++ G SMP F +G ++ M+ +SD L+ S Sbjct: 149 IFASMRQNSLLDHSIITFSVIGISMPSFVFGALMAMIFG---------DLLSDYTGLNAS 199 Query: 179 NPLTGFMLIDTAIWGEDGNFID---AVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 L W E+ F D + ++ILP I LG P+ +I+++TRSSMLEVL +D Sbjct: 200 GSL----------W-ENNIFGDRELKLKNLILPTITLGLSPMTIIIQLTRSSMLEVLSQD 248 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 YIRTARAKGL +I HAL+NA+ PV+T + + +L+AGA E+IF W GLG I Sbjct: 249 YIRTARAKGLGYYTIIFKHALKNALNPVITAVSGWLASLMAGAFFVESIFGWKGLGSVTI 308 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +A+ D+PVV G + VA + I+ N+ VD+ Y +++PR+R K Sbjct: 309 NAVLNLDFPVVMGATIFVALVFIITNIFVDIFYALIDPRVRLK 351 >UniRef50_Q67KR8 Oligopeptide ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KR8_SYMTH Length = 321 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 136/339 (40%), Positives = 194/339 (57%), Gaps = 19/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FILRRL ++P +G +LL FA + + PGDP + R P + +L LD Sbjct: 1 MAGFILRRLLQLVPMLLGASLLIFAVIRLAPGDPYSGLVDPRA-DPAKIEELRRRHCLDC 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY ++ GDLG S++ RIPV + R ++ LGV A GIP G+L Sbjct: 60 PLPQQYWRWLSHAARGDLGTSIRFRIPVAQLIGDRLGPSIALGVTAQSIVLLAGIPFGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH-WNLTPVSGRVSDMVFLDDSN 179 AAV+RG+ D +L ++P F+ G++L+ S+ + P +G F + Sbjct: 120 AAVRRGTWVDAAVTTCSLAFLAIPAFFLGLLLLRFFSLGGLQVLPSAG------FTTPGS 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 LTG F+DA H+ILPA LG +A ++ RS+MLEVL +DY+RT Sbjct: 174 LLTG-----------PARFLDAARHLILPATALGVTGIAGLMSHVRSAMLEVLRQDYLRT 222 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL VI HALRNA++PV+T++GL + LL GAI+TE++F WPG+GR AL Sbjct: 223 ARAKGLPERMVIYRHALRNALMPVITLLGLNLPALLGGAIITESLFQWPGVGRLTYTALL 282 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ LL A + +L +LL D+ Y V+PR+R++ Sbjct: 283 ERDYPVLMALNLLFAALTLLGSLLADVGYAAVDPRVRYE 321 >UniRef50_Q5E4F5 Oligopeptide transport system permease protein OppB n=88 Tax=Proteobacteria RepID=Q5E4F5_VIBF1 Length = 306 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 116/338 (34%), Positives = 184/338 (54%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI++R+ IPT + + ++F + PG+P + ER + PE A + A+ GLDK Sbjct: 1 MFQFIIKRILEAIPTMLVLITISFFLMRFAPGNP---FSTERPLPPEVMANINAKYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPR-FQATLELGVCAMIFATAVGIPVGV 119 P+++QY Y+ ++ GD G S K + E V + ++G A IF +G+ VG Sbjct: 58 PVFEQYTTYLGNILQGDFGPSFKYQDYTVNELVEAALPVSAKVGFFAFIFTVVLGVTVGT 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+++ + D+T + A+ G MP F LI L S+ P G Sbjct: 118 LAALRQNTWLDYTIMSTAMVGVVMPSFVLAPALIYLFSIELGWFPAGG------------ 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 W DG+F +M LP + + + +A R+TR SM+E L ++IRT Sbjct: 166 ------------W-HDGSF----KYMFLPILGMSFLYVATFARITRGSMIETLNSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +II HAL+ AMLPVV+ +G ++ G+++ ETIF PG+G+ ++A Sbjct: 209 ARAKGLSYRYIIIKHALKPAMLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAF 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V G +L+ + IL N +VD+L +++P+IR+ Sbjct: 269 NRDYSLVMGVTILIGFLFILFNAIVDVLLAIIDPKIRY 306 >UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Tax=Deinococci RepID=Q5SL23_THET8 Length = 332 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/338 (36%), Positives = 193/338 (57%), Gaps = 11/338 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+R+ +IPTF G T L F + M PGD + + + ++PE A+L A+ GLD+ Sbjct: 6 MASYILKRILSLIPTFFGATFLAFLIIQMAPGDYLTQLELDPKVTPETIARLRAQFGLDR 65 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QYL ++ ++H +LG S + PV E PR ++ L V + + + +PVGV Sbjct: 66 PFHEQYLLWMHNLLHLNLGYSFAYQAPVLEIVWPRVLNSMVLVVPSTVLLFLIAVPVGVY 125 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A+++ S+ D LA G ++P F+ ++L+ LV V R MVF Sbjct: 126 GALRQYSLGDRVVSFLAYLGLAIPNFFLALILMYLV------LQVYFRTGVMVFPVSGMT 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +GF + W + +D H +LP +VL T +A R+ R MLE L +DY+RTA Sbjct: 180 SSGFE--QFSFWQK---VVDVAWHAVLPIVVLTTSDIAGFSRIMRGQMLEALSQDYVRTA 234 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRNA++P+V IG + TL++GA L E + +WPG+ L+DA+ + Sbjct: 235 RAKGLPERVVVYKHALRNAIIPIVANIGGILPTLISGAGLVEVVTAWPGITPLLLDAISQ 294 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D VV G + + ++++ NLL DLL V+PRIR++ Sbjct: 295 QDLYVVAGFLTMGLVLLMIGNLLSDLLLAWVDPRIRYE 332 >UniRef50_A1WMS2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMS2_VEREI Length = 369 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 120/331 (36%), Positives = 191/331 (57%), Gaps = 6/331 (1%) Query: 9 LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLH 68 L V+ T G+ L+TF ++P DPV+ + G+R + + ++ E+GL +P+ QQ+ Sbjct: 42 LSTVLITLAGLLLVTFLLGRVLPADPVLRVVGDRA-PQDLYDRVYREMGLHRPLAQQFAL 100 Query: 69 YIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSI 128 +I ++ G+ G S + P+ E+ + F AT+EL A++ IP+GVL A G Sbjct: 101 FIGDMVRGNFGKSSVTGNPIGEDILRYFPATVELATLAIVLGVLGAIPLGVLCARYAGRW 160 Query: 129 FDHTAVGLALTGYSMPIFWWGM--MLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFML 186 DH +L G+S+PIFW G+ +L+ + W P GR+ D+ + +T ML Sbjct: 161 PDHLVRVASLVGHSVPIFWLGIVGLLVFYARLGWVAGP--GRL-DVAYRYAVPEVTRLML 217 Query: 187 IDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLT 246 +D+ + GE F +A++H++LPA +LG + L + RMTRS +L L +DY R KGL+ Sbjct: 218 VDSLLAGEWEVFGNALSHIVLPAALLGLVALGYVARMTRSFLLWQLRQDYTTVLRLKGLS 277 Query: 247 RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVV 306 ++ HALRNA P++ VI L LL GA+LTET+F+WPGLG ++ D+L D P V Sbjct: 278 ESAILWRHALRNAAGPILAVIALTYAYLLEGAVLTETVFAWPGLGMYITDSLFAADIPAV 337 Query: 307 QGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 LLV + +L+N+ +L+ ++PR R Sbjct: 338 LTATLLVGLIFMLINIASELIQSALDPRTRR 368 >UniRef50_D0GM08 Oligopeptide ABC transporter, permease protein AppB n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GM08_9FUSO Length = 320 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/338 (33%), Positives = 190/338 (56%), Gaps = 22/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++++RL + G+++ F ++ PG+P + M G+ PE + L ELG Sbjct: 1 MLKYLIKRLIISFFVLFGVSISIFYLINKQPGNPYLHMINP-GVPPEIVKKKLIELGYYD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + +Y+ ++ V+ DLG S+K V + R T L ++ ++ GI +GV+ Sbjct: 60 PFFIKYVKWLQRVIFLDLGYSIKYSEKVTKVIASRLGNTFILMGTSLFLSSISGIFLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+K+ ++ D L+ G S+P F+ ++LI + S L P SG + DS Sbjct: 120 SAIKKNTVIDEIITVLSFAGLSIPTFFVSLLLIKVFSYDLRLFPASG-------MYDS-- 170 Query: 181 LTGFMLIDTAIWGEDG--NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 I G +G F + HMILP VL + + +R TRS+++E + ++Y+ Sbjct: 171 ----------INGSEGITVFYNLFRHMILPTTVLAIMQSVIFIRYTRSAVIEQMSKEYMM 220 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA AKGLT R + HAL+NA+LP++TV LQ+ T+ +GA++TET+F WPG+GR +A+ Sbjct: 221 TAMAKGLTFKRAVFGHALKNALLPIITVFFLQLPTIFSGALITETVFVWPGIGRLGYEAI 280 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++ G + + A +IIL NL D+ Y ++ RI+ Sbjct: 281 SNRDYPLIMGILTVTAIIIILSNLFADIFYMKIDKRIK 318 >UniRef50_B9LWF0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LWF0_HALLT Length = 329 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 195/323 (60%), Gaps = 2/323 (0%) Query: 13 IPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWG 72 + + +G+++L F ++PG+P + G S ++ Q AE+GL+ P+ QY+ Y+ Sbjct: 2 VASLLGLSVLIFVISRVLPGNPARLALGAMA-SEQQVEQFAAEMGLNGPLSAQYIEYMRR 60 Query: 73 VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHT 132 ++ GDLG S+++R PV E+ V + AT EL A F +GIP+G+LAA RG D+ Sbjct: 61 LLVGDLGQSLQTRNPVVEDLVTKLPATFELISLAFGFMVVLGIPLGILAAQHRGGAVDNV 120 Query: 133 AVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW 192 A S+P F G++ ++ + N P++GR+S + ++ TGFML+DT + Sbjct: 121 TRFFAFATVSVPSFLVGIVFQLVFGYYLNWFPITGRLSS-AYGEEVVRTTGFMLVDTLLS 179 Query: 193 GEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVII 252 G +DA AH++LPA+ L + ++R+TRSSM++V G+DYI RA GL V+ Sbjct: 180 GSFAAHVDAWAHLLLPALALSFSGMGQVIRITRSSMIDVEGKDYIEATRAYGLPSWLVVN 239 Query: 253 VHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLL 312 ++L+NA +P +T++GLQ LL+GA + E ++SWPG+ ++ + ++ D + G +L Sbjct: 240 KYSLKNAFVPTLTILGLQYAWLLSGAFVIEIVYSWPGVAKYGVQSVLTSDVNAIVGVTML 299 Query: 313 VATMIILVNLLVDLLYGVVNPRI 335 + + + VNL+VD+L V++PR+ Sbjct: 300 IGVVFVTVNLIVDVLASVLDPRV 322 >UniRef50_Q5LPL4 Dipeptide ABC trasnporter, permease protein n=1 Tax=Ruegeria pomeroyi RepID=Q5LPL4_SILPO Length = 314 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 123/340 (36%), Positives = 193/340 (56%), Gaps = 27/340 (7%) Query: 1 MLQFILRRLGLV-IPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLD 59 ML FI +R+GL + T + ++ L F VHMIPGDPV M G R +PE A L +GLD Sbjct: 1 MLSFIFKRIGLAAVITVLAVSSL-FLIVHMIPGDPVSTMLGPRA-TPEMRAALETRMGLD 58 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 KP+ Q + ++ GDLG+ + S PV E + + TL L + ++ ++ +GI +G Sbjct: 59 KPLIVQIGLFFANMLRGDLGMDVFSNRPVTEIVLNQVPFTLTLILFSITWSAVLGIALGC 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AV R S+ D L+++ ++P F + +++ +V P G Sbjct: 119 YSAVNRNSLGDRLTGILSVSVIAVPAFVVALYSLLIFAVKLQWFPAIGA----------- 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G+ G++ D + H++LP++ +G + I R+ R+SMLEV+GE +IRT Sbjct: 168 -------------GDAGDWGDQLHHLVLPSLAIGLSWVGYIARLVRASMLEVMGEGHIRT 214 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA GL R++ +ALR A+LP VTVIG+ +G LL+ A+ TE +FS PGLG+ +ID++ Sbjct: 215 ARAFGLPERRIVFGYALRLAILPTVTVIGVGMGFLLSAAVFTEIVFSRPGLGKLVIDSIT 274 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R+YPVV G VL + + L D++ +++PRIR K Sbjct: 275 TRNYPVVMGSVLFSTLIFVASTTLADIVNAILDPRIRAGK 314 >UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicutes RepID=C0ZJM9_BREBN Length = 318 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 20/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + L+R+ + T G ++L F + PGD V ++ ER +L A GLDK Sbjct: 1 MTSYFLKRVFYMALTLFGASILIFFLYALTPGDFV---DTSLKLTAERKLELKAMYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++Y ++ + GD G S++ + PV + L + + F + I +GVL Sbjct: 58 PVVERYFIWMKNALQGDFGYSLQYQQPVMSLLNDYIWNSFLLAITSTFFTWLIAISIGVL 117 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++ S FD S+P+F+ G++ I L +V L P G M+ + Sbjct: 118 SAARQHSWFDALVTIGVFAAMSLPVFFVGLLFIKLFAVDAKLFPAGG----MMMIGSKE- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG T W D V HM LP VL + + + R R++MLEV+ +D++RTA Sbjct: 173 -TGL----TYAW-------DVVQHMFLPVTVLTLLSVGTLTRYFRTNMLEVIQQDFVRTA 220 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRNA+LP +T++G ++ L GAI+TE IF+WPG+G+ + A Sbjct: 221 RAKGLKEKVVLHKHALRNALLPAITLLGFELPALFGGAIITEKIFNWPGVGQLYMQAFSV 280 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G + +A + ++ NL DLLY V +PR+R K Sbjct: 281 RDYPLLMGFTMFLAILTVIGNLSADLLYRVADPRVRLK 318 >UniRef50_B5JCD3 ABC transporter, permease protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5JCD3_9RHOB Length = 308 Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 183/323 (56%), Gaps = 34/323 (10%) Query: 15 TFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVM 74 T I +TF V + G+P+ GE G++ E +L+ L+ +WQQY+ ++ GV+ Sbjct: 15 TLFAIVTVTF-IVTRLSGNPIDTFLGE-GLTTEGREELIRYFQLEGTVWQQYVAFLRGVV 72 Query: 75 HGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAV 134 G+ G+S R PV E R A+ +L + ++ V IP+GVL A+ + S + Sbjct: 73 SGEFGLSFIDRRPVTEVVGDRLWASGQLLLASVALTITVSIPLGVLGAIYQKSWIGSAVM 132 Query: 135 GLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGE 194 +A GY++P F ++++++ S N PV G Sbjct: 133 MIAFAGYAVPSFILAILMVLVFSYWLNWLPVVG--------------------------- 165 Query: 195 DGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVH 254 +G F+ H ++P I + + +A + R TR++ML+VLG+D+IRTARAKGLT RV++ H Sbjct: 166 NGTFL----HFVMPTIAMSGVLVAALTRFTRNAMLDVLGQDFIRTARAKGLTEARVVLRH 221 Query: 255 ALRNAMLPVVTVIGLQV-GTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLV 313 L NA + V++VIGLQV G AG+++ E+IFSWPG+G+ L+ A RDYPV+Q GV+ V Sbjct: 222 GLGNAGVTVISVIGLQVAGLAAAGSVVVESIFSWPGIGQLLVTAALMRDYPVLQFGVITV 281 Query: 314 ATMIILVNLLVDLLYGVVNPRIR 336 A ++ +N D+ Y +V+PRIR Sbjct: 282 AIAVVAINAFTDIAYALVDPRIR 304 >UniRef50_A9B1I7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1I7_HERA2 Length = 335 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 119/366 (32%), Positives = 199/366 (54%), Gaps = 59/366 (16%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ FI+RR+ +IP + L+TF + G P E+ ++P A L + GLDK Sbjct: 1 MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGP---FDQEKEVAPSTIALLNRKFGLDK 57 Query: 61 PMW-------------------------QQYLHYIWGVMHGDLGISMKSR--IPVWEEFV 93 P W Q+ +Y+ + GDLG + S+ V ++ Sbjct: 58 PAWLNSAEFSNRLSTEGNPFLALRGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIK 117 Query: 94 PRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLI 153 F +L LG+ ++ FA VG P+G+L A+++ +IFD+ ++ ++ G+S+P F G++L+ Sbjct: 118 ETFPISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLIISTIGFSVPTFVTGLLLL 177 Query: 154 MLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIW-GEDGNFIDAVAHMILPAIVL 212 +++S +++ P+ D ++W G ++I PAI+L Sbjct: 178 LVMSKVFDVAPIK---------------------DPSVWQGFSTSYIP-------PAIIL 209 Query: 213 GTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVG 272 G +A I R+TRSS+LEV +DYIRTARAKGL VI+ H LRN+++PV+T++G V Sbjct: 210 GLGTMAYITRLTRSSVLEVKRQDYIRTARAKGLGDRVVILRHILRNSLIPVITILGPAVA 269 Query: 273 TLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVN 332 L+ G+ + E++F PG+G I A+ RDY ++ G L + ++ L N++VDL YG+++ Sbjct: 270 GLVTGSFIIESVFRVPGIGSEFIGAIGSRDYSMIMGSTLFFSLLVALGNIMVDLSYGLID 329 Query: 333 PRIRHK 338 PRIR+ Sbjct: 330 PRIRNS 335 >UniRef50_B6FU31 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU31_9CLOT Length = 288 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 24/308 (7%) Query: 29 MIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPV 88 MIPG P + G +PE+ L AELG D+P QY+ + V+ GD G S V Sbjct: 1 MIPGGPATALLGMEA-TPEQIHTLNAELGFDRPFLTQYVDWFGKVLQGDWGTSYFLHQSV 59 Query: 89 WEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWW 148 E F TL L + A I A + +P+G+LAA KRG+ D AV +L G ++P F Sbjct: 60 LEAIAEYFPPTLSLAILAQIIALLLAVPLGILAACKRGTAVDVAAVTTSLLGVALPGFLL 119 Query: 149 GMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILP 208 M L+++ SV+ + PV+G S ++ + ++ +P Sbjct: 120 SMFLMLIFSVYNHWFPVAGYAS-----------------------LSEGILEHLKYLFVP 156 Query: 209 AIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIG 268 A+ LG + A + RM RSS+L+VL +YI TAR+KGL VI+ + L+NA ++T IG Sbjct: 157 ALSLGIVQAAYLTRMIRSSLLDVLHMNYIHTARSKGLKERTVILRYGLKNAAPVILTAIG 216 Query: 269 LQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLY 328 G+L+ G I+TET+F+ PGLG + ++ RRD V+QG VL V + ++VNL VD+LY Sbjct: 217 QSFGSLITGTIVTETLFNIPGLGMLTLSSINRRDVFVIQGVVLFVTLLYVIVNLTVDVLY 276 Query: 329 GVVNPRIR 336 G V+PR+R Sbjct: 277 GFVDPRLR 284 >UniRef50_A9EXW6 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bacteria RepID=A9EXW6_9RHOB Length = 313 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/335 (32%), Positives = 193/335 (57%), Gaps = 27/335 (8%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +Q+IL+RL L+ TF + ++ F V ++PGDP + +AG+R S A + LGL++P Sbjct: 4 IQYILKRLALMAVTFFLVMIIIFLLVRLLPGDPAIAIAGDRA-SDADLAAIRERLGLNQP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ + GDLG S+ R PV + R TL L A++ + + P+ +A Sbjct: 63 LVIQFWQFLSNTVQGDLGRSILMRAPVMDVIANRLPTTLFLTTYAVVLSVLIAGPLAFVA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ RG D + G SMP+F+ G++L+ ++ PV G Sbjct: 123 ALNRGRWPDAVIRTVFQVGLSMPVFYIGLILLTFLAAQLRWFPVGG-------------- 168 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +G+ +F++ + H+ LP++ + A+I+R RS+++EV+ +Y+ AR Sbjct: 169 ----------YGD--SFVERLYHLFLPSVAVALYTSAIIMRNLRSAIVEVVDAEYVEFAR 216 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +++ H LRNA++ VT++GL +G L++G ++TET+F+ PG+GR +++A+ R Sbjct: 217 AKGLSAWQILGRHVLRNALISTVTLLGLSIGNLMSGTLVTETVFAVPGVGRLMLEAIFAR 276 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP++QG L A ++ +V LL DL+ ++PR+R Sbjct: 277 DYPLIQGLTLTFAVLVSIVFLLTDLIQSALDPRMR 311 >UniRef50_B3DQR2 ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=31 Tax=Bacteria RepID=B3DQR2_BIFLD Length = 363 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 125/340 (36%), Positives = 199/340 (58%), Gaps = 6/340 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +F+L R L+IPT + + F FV GDP+ G R ++P Q + G D+ Sbjct: 27 FFRFVLTRFLLIIPTVFILVTIVF-FVMRATGDPISAALGGR-LTPAELQQRIHAAGYDR 84 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ G++HGDLG ++ PV AT EL A+I A VGI +G L Sbjct: 85 PLIVQYVDYLGGLLHGDLGTTLTDNQPVISILTHYGAATFELAFLALIVALIVGIGLGRL 144 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRV---SDMVFLDD 177 AA KR D A+ Y+ P+F+ G++L ++ +V N+ P SGR S+M F Sbjct: 145 AARKRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAVWLNILPASGRSDLNSEMQFTRL 204 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +P TGF +ID G+ +D + H +LPA+ LG + V +R+ R++++ Y+ Sbjct: 205 VSP-TGFYIIDAIQLGDMNVLVDVLRHAVLPAVALGLLTAGVFIRLVRTNVISTYNSGYV 263 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 AR++G++ R++ HA R A++P++TV+G+Q+ +LAGA+LTET F W GLG L Sbjct: 264 EAARSRGVSEKRLLNKHAWRPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQY 323 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 L+ RD+ VQG V+L+A ++ +VN LVD++ +++PR+R+ Sbjct: 324 LKARDFVAVQGIVILIAIIVAVVNFLVDVIAALIDPRVRY 363 >UniRef50_A4ALV3 ABC transporter, membrane spanning protein (Dipeptide) n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALV3_9ACTN Length = 315 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/336 (34%), Positives = 185/336 (55%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F+ RRL +IP + +L+ F ++PGD + AG +PE A+ A+LGLD Sbjct: 1 MLRFVSRRLLALIPQLLVASLVIFILTALMPGDAAIARAGGENATPELIAEYRAQLGLDD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ ++ H++ + G+ G+S + PV + R TL L + I A A+ +P+G+L Sbjct: 61 PLYLRFFHFVGNTLTGNFGVSFITGEPVIDILARRIPVTLSLVILGFILAIAIALPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ D ++ +A TG ++P FW+G++L++L S+ P +G VS NP Sbjct: 121 AALNPNGWADRISLAVATTGVAIPNFWFGILLVLLFSLTLKWLPATGFVS-----IQDNP 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+ H++LPA LG A + R R+S+ + L DY+RT Sbjct: 176 WQWFL------------------HLLLPAFTLGHALSAELTRQLRASLGDHLRRDYVRTM 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL + V+ HALR+A+ P VT +GLQV + A++ E +F PGLG ++ A+ Sbjct: 218 RAAGLGEVSVVGKHALRSALGPAVTTLGLQVPVAIGAAVVIEAVFDLPGLGSQMVQAVFS 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD V+QG +L +++L N L DL Y V+NP++R Sbjct: 278 RDTQVLQGVILFTVILVVLGNFLTDLAYAVINPKVR 313 >UniRef50_Q11EZ9 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11EZ9_MESSB Length = 306 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 188/338 (55%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +L+ L + + + F + ++PGDP ++ G G S L LGLD+ Sbjct: 1 MLTQVLKTLAHSVISLFLLFTFVFFMIRIMPGDPARLLGGA-GASDYDVQTLRESLGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +Q+L ++ V GD G S+++ PV E + + L AM+ A A +P GV+ Sbjct: 60 SVMEQFLIFVRNVAQGDFGRSIQTGQPVGAEILTALAWSFSLVTAAMLLAIAFAVPAGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKR + D + +A+ S+P FW ++LI + SV+ L P G Sbjct: 120 AAVKRNRLPDISLTSIAVASTSLPAFWLALILIEVFSVNLRLLPSGG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G+ N+ ILP +VL + +I RMTR+S++EVL DY+RTA Sbjct: 167 -----------TGDLRNY-------ILPTVVLAATQVGLITRMTRASVVEVLTADYVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R+++ H L NA P VTV+GLQ G +LAG+I+TETIF+WPG+GR LI A+Q Sbjct: 209 RAKGVHPYRILLRHVLVNAAAPTVTVVGLQTGLVLAGSIVTETIFNWPGVGRLLIRAVQA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++Q +L+ ++ NLL DLL +++PR+R K Sbjct: 269 RDYPMIQALILVFGVAMVTFNLLADLLNMLIDPRLRKK 306 >UniRef50_D2LY63 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY63_BACS4 Length = 323 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 114/346 (32%), Positives = 194/346 (56%), Gaps = 40/346 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--------GISPERHAQL 52 ML+ ILRR + T TLL F + + PGDP+ I G + ER A+L Sbjct: 1 MLKIILRRGCEALLTLFCSTLLIFVLIQLSPGDPIKIYLGHQPELAMKNTEAYEERVAEL 60 Query: 53 LAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 ELGLD+P+ QY+ +I V+ DLG S+ + PV E R AT+ L + A+ Sbjct: 61 QKELGLDQPVMLQYVSWIKRVLTLDLGNSIHTGRPVSIEIAERLPATILLAIAAITIQVM 120 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM 172 +G+ G+++A K G+ D+ + S+P+F G++L+ + +V + + ++ VS Sbjct: 121 IGLYFGIISARKAGTATDNIVRIFCVFFASIPVFVVGLLLLYVFAVSFRVFDINSSVS-- 178 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 + + LPAI LG I +VR+ R+++L Sbjct: 179 -----------------------------LQRLWLPAITLGLIGSPQLVRLIRANLLSEF 209 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 G+ Y+ + ++GL + RV+ HALRN +LP++T+ GL +L++GA++ E+IFSWPG+G+ Sbjct: 210 GQTYVLSVISRGLDKKRVV-RHALRNVLLPIITIAGLSFISLISGAVVIESIFSWPGIGK 268 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +D++ +DYPV+QG ++ +++IL+NLLVD+ Y +++PRIR++ Sbjct: 269 YALDSILLKDYPVIQGYAFIMVSLVILINLLVDVAYVIIDPRIRNR 314 >UniRef50_O58538 323aa long hypothetical oligopeptide transport permease protein APPB n=1 Tax=Pyrococcus horikoshii RepID=O58538_PYRHO Length = 323 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/337 (34%), Positives = 187/337 (55%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I++R +I + L F ++ PG+P +MAGE + E + A GLDK Sbjct: 4 MKVYIIKRSIQLILVIFFVLFLNFIIINAAPGNPAQLMAGEYS-TEEYIKAIEARWGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++L Y+ ++HGDLG S + PV + + R TL L V ++I A VG+ + + Sbjct: 63 PIHIRFLIYMKNLLHGDLGYSYRYLEPVSKLIMERIGKTLLLTVPSIILAFLVGVWLARI 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K G D + + L YSMP FW G++LI++ V + P++G Sbjct: 123 AARKPGGKLDVSLSIITLIFYSMPSFWLGLLLILVFGVKLGILPIAG------------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T + ++ W D F D + HM+LP L I + R+TR +++E EDY++T Sbjct: 170 MTNIRAVYSSSW--DKAF-DILKHMVLPVTTLMLIQIPAYFRITRGAIIEQSTEDYVKTF 226 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G ++ + + RNA+LP VT++GL++G +GA L E +F WPG+GR L+DA Sbjct: 227 DAVGFSKKHIFNKYIFRNAILPPVTILGLRLGYAFSGAALVEIVFGWPGMGRLLLDAAFA 286 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++ G L++A + + + DLLY V++PRIR+ Sbjct: 287 RDYPLIMGIYLVIAVSVAVAIFITDLLYAVLDPRIRY 323 >UniRef50_A8TZ97 D-Ala-D-Ala transporter subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ97_9PROT Length = 334 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 118/334 (35%), Positives = 189/334 (56%), Gaps = 5/334 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 L ++ R +PT +G+ ++TF H+IP DP+ AGE + E+ A L + GLD+ Sbjct: 3 FLVLVVNRCLWFLPTVLGLMVITFTISHLIPADPIAAAAGENATA-EQIAALRVKFGLDQ 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q Y+ V GD GIS+ ++ P+ + R ATLEL A++ A +GIP+GVL Sbjct: 62 PIYVQLYRYVLAVAQGDFGISLYTQRPIVFDIATRLPATLELTFVAVLIAATLGIPLGVL 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A R S DH + ++G ++ FW ++ +L ++ TP+ GRV + Sbjct: 122 SATHRNSPLDHVLRVITVSGLAIAAFWLAILFQLLFAMKLGWTPLQGRVDGW----GPDS 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF LID + G+ D AHMILPA L +A IVR TR+ +LE + +Y+ Sbjct: 178 VTGFFLIDAVLMGDLEILQDVAAHMILPAATLAFPAMATIVRFTRAGVLEAINSNYVMYE 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G R ++ + LRNA++ VT IGL G L+A ++ E +F WPGLG + + ++ + Sbjct: 238 EAMGFPRRIIVWKYVLRNALIGTVTQIGLIFGILIANGVVVEAVFDWPGLGLYAVSSILQ 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR 334 DY + ++ + I+VNLLVD+ +G+++PR Sbjct: 298 SDYNGIMAFAIIAGVIFIVVNLLVDITHGLIDPR 331 >UniRef50_A9CKU6 ABC transporter, membrane spanning protein (Agrocinopine) n=5 Tax=Agrobacterium RepID=A9CKU6_AGRT5 Length = 308 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 122/342 (35%), Positives = 179/342 (52%), Gaps = 39/342 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMI---PGDPVMIMAGERGISPERHAQLLAELG 57 M+ FIL RL I + +LT FV +I GDP M GE +PE A G Sbjct: 1 MISFILARLVRAII----VMMLTVTFVFIILRLGGDPARAMLGENA-TPEALAAFRTAWG 55 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+ + +Q+L Y+ + GD G+S V+ R TL L + A + + VGIP Sbjct: 56 LDRSIPEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPA 115 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G++AAV+R S D + + A+ GYS+P F G+ LI + +V + + P SG Sbjct: 116 GIIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSG---------- 165 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 ++ W H ILP G + A I R RS+++EVL + YI Sbjct: 166 -----------SSTW----------QHAILPVATFGLVNAAAIARFARSALIEVLEQPYI 204 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 ARA G+ + V+I HAL NA +P+VT++G LL G+ + ET+F+WPGLG + A Sbjct: 205 AAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAGLLGGSAIVETVFAWPGLGSGFVRA 264 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + D VVQ +LL ++ +NL+VD+LY V+NP+IR +K Sbjct: 265 ITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNPKIRLQK 306 >UniRef50_A6DGV5 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DGV5_9BACT Length = 311 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 192/346 (55%), Gaps = 42/346 (12%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++L+RL I T + I+ TF +HM+PGDP ++ E+ I+PE L AE G+DK Sbjct: 1 MKKYLLKRLWHGIITILFISTATFFAMHMVPGDP---LSSEKAITPETRKALEAEYGIDK 57 Query: 61 PMWQQYLHYIWGV-MHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P+ QY ++ + GDLG S +R V + F + +LG+ A+ FAT I G Sbjct: 58 PIAIQYGIFLKKTFIEGDLGFSYTNRNTKVNDIIANHFPVSAKLGLLAIFFATTGAIMWG 117 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMP--IFWWGMMLIML---VSVHWNLTPVSGRVSDMV 173 +AA R + D+T++ L + S+P +F G L+++ + WNL P G Sbjct: 118 AIAAKYRNRLPDYTSMILVILFISVPSFVFASGTQLLIVKLNAATGWNL-PYRGT----- 171 Query: 174 FLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 ++ I+PA++LG +A + R+ RSS+LEV+ Sbjct: 172 --------------------------ESFVSQIVPAMILGLGTMAFLTRIMRSSLLEVIH 205 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 DYIRTARAKGL+ ++ H LRNA+LPV+T+IG + + G+ + ETIF+ PGLG++ Sbjct: 206 SDYIRTARAKGLSPKQIFFSHELRNAVLPVITIIGPAIAAITTGSFVIETIFTIPGLGKF 265 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + A+Q+ DY V+ G + + ++L L VD+LYG ++PRI+ +K Sbjct: 266 FVQAVQQNDYTVIMGTTVFYGSFLVLTVLAVDILYGFIDPRIQVEK 311 >UniRef50_Q0RX95 ABC peptide transporter, permease component n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RX95_RHOSR Length = 315 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 183/319 (57%), Gaps = 24/319 (7%) Query: 20 TLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLG 79 ++LTF + MIPGDP+ + E G +PE A GLD P+ ++YL ++ GV+ GDLG Sbjct: 21 SILTFFLLEMIPGDPLATLLPE-GATPEMRAAAAERFGLDGPLIERYLEWLGGVLQGDLG 79 Query: 80 ISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALT 139 SM+S++PV + + R TLEL +++ A + +PVGV + + G + D L Sbjct: 80 RSMQSQVPVADAILERLPVTLELAGLSILVALLIALPVGVYSGYRPGGVADRITTFLCSV 139 Query: 140 GYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFI 199 S+P F G++L+ + +V + PV+G PL+ + G + Sbjct: 140 TLSIPSFLLGVLLVFVFAVTLHALPVTGW----------TPLSAGL----------GTHL 179 Query: 200 DAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNA 259 + +ILP L I VR+ R+ M+ L +D++ +ARA+G+ R++ VHALR + Sbjct: 180 RS---LILPVATLAAIEAVAFVRLLRNDMVATLQQDFVLSARARGVPTGRILFVHALRPS 236 Query: 260 MLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIIL 319 ++TV+G+ +G L+ G ++ E++F+ PGLG +++A+ RDY +VQG VLLVA +L Sbjct: 237 AFSLLTVLGVAMGRLIGGTVIIESLFALPGLGSLVLNAINSRDYVLVQGIVLLVAVGYVL 296 Query: 320 VNLLVDLLYGVVNPRIRHK 338 +N LVDL Y +++PR+R Sbjct: 297 INALVDLAYPLLDPRVRSS 315 >UniRef50_A5EEY0 Putative ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EEY0_BRASB Length = 328 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/326 (37%), Positives = 184/326 (56%), Gaps = 22/326 (6%) Query: 17 IGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDKPMWQQYLHYIWGVMH 75 + I +L FA + +PGD ++A E G S E+ A+L GL + + Q Y+ GV+ Sbjct: 17 LAIAVLNFALLKSLPGDLADVVATESGAASSEQVAELRERFGLGRSVPAQLASYVGGVLR 76 Query: 76 GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVG 135 GDLG+S + PV + + R AT+ L A+ + +G+ +G+L+A + + D Sbjct: 77 GDLGMSFRFGEPVAQLVLGRLPATITLVGLALPISVLLGMGLGMLSARRPNGLVDAALSL 136 Query: 136 LALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGED 195 L+ GYS P+FW +MLI+ V PV G I G Sbjct: 137 LSTLGYSAPMFWTALMLIVAFGVKQPWFPVGG-------------------IRNVTAGYT 177 Query: 196 G--NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIV 253 G + +D + H++LP L +A+ R+ R+S++E L EDYIRTARAKG RV+ Sbjct: 178 GLRDLVDVLWHLVLPTATLSIYYVAIYARLYRASLIEQLAEDYIRTARAKGAREGRVMFG 237 Query: 254 HALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLV 313 HALRNA LPV+T++GLQ +L G+I+ ET+F+WPGLG+ +A++ RD ++ G +LL Sbjct: 238 HALRNATLPVLTMLGLQSSAVLGGSIVIETVFAWPGLGQLSFEAVRSRDVQLLLGVLLLS 297 Query: 314 ATMIILVNLLVDLLYGVVNPRIRHKK 339 +++L NLLVDLL ++PRIRH+ Sbjct: 298 GILVVLTNLLVDLLQTRLDPRIRHRS 323 >UniRef50_P24138 Oligopeptide transport system permease protein oppB n=79 Tax=Firmicutes RepID=OPPB_BACSU Length = 311 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 125/340 (36%), Positives = 188/340 (55%), Gaps = 35/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RRL +I T I +TF + PG P +GE+ + PE A L A GLDK Sbjct: 1 MLKYIGRRLVYMIITLFVIVTVTFFLMQAAPGGP---FSGEKKLPPEIEANLNAHYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPR-FQATLELGVCAMIFATAVGIPVGV 119 P++ QY+ Y+ V D G S K + + + F + LG A++ A A+G+ GV Sbjct: 58 PLFVQYVSYLKSVAMWDFGPSFKYKGQSVNDLISSGFPVSFTLGAEAILLALALGVLFGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+ D+T L + G S+P F +L + S+ L PV+G Sbjct: 118 IAALYHNKWQDYTVAILTIFGISVPSFIMAAVLQYVFSMKLGLFPVAG------------ 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 W D+ A+ LP+I L ++P+A I R++RSSM+EVL DYIRT Sbjct: 166 ------------W-------DSWAYTFLPSIALASMPMAFIARLSRSSMIEVLNSDYIRT 206 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKGL+R V + HA+RNA+LPVVT +G +L G+ + ETIF PGLG ++++ Sbjct: 207 AKAKGLSRPAVTVRHAIRNALLPVVTYMGPMAAQVLTGSFIIETIFGIPGLGAHFVNSIT 266 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ G + + +++L L+VD+LYG+++PRI+ K Sbjct: 267 NRDYTVIMGVTVFFSVILLLCVLIVDVLYGIIDPRIKLSK 306 >UniRef50_Q89XK2 Peptide ABC transporter permease protein n=2 Tax=Proteobacteria RepID=Q89XK2_BRAJA Length = 314 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 119/336 (35%), Positives = 203/336 (60%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + L+R G T + +++ FAF+H++PGDP+ ++ G+ +P++ L +LGLD+ Sbjct: 1 MWSYALKRAGTTAVTLLAASVIIFAFIHIVPGDPIYVLLGDTA-TPDQIDALRHQLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL + V+ G+LG S+ + PV + + L MI+ T +G+P+G++ Sbjct: 60 PIILQYLTWTGHVLEGNLGRSIFFQAPVLSVIADGAETSALLATMTMIWVTLIGVPIGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+ G+ D G A+ S+P FW G+ LI++ + P SG S +F Sbjct: 120 AAVRHGTWLDQGLSGAAMLMASIPTFWVGLYLILIFAAWLGWFPSSGYPS--IF------ 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +G ++ + +++LP++ L A+I+R+TR+SML+V EDY+RTA Sbjct: 172 --------------EGGLVN-LRYLVLPSLALAAPNAALILRLTRASMLDVAREDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +V++ H LRNA+L VV+ G LL+ A++TET+F+ PG+GR ++ ++ R Sbjct: 217 RAKGIRPWQVVVRHILRNALLAVVSAFGFTFAALLSEAVVTETVFALPGIGRLVVQSILR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+QG +L++ + +L+NL+VDL Y +++PR+ Sbjct: 277 RDYPVIQGVILVIVVVYLLINLIVDLSYRLLDPRVE 312 >UniRef50_D1A2R5 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Actinomycetales RepID=D1A2R5_THECD Length = 352 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 137/360 (38%), Positives = 198/360 (55%), Gaps = 46/360 (12%) Query: 1 MLQFILRRL-GLVIPTFIGITLLTFAFVHMIP------GDPVMIMAGERGISPERHAQLL 53 ++ FI+RRL G V+ F+ IT +TFA ++P D + + +PE AQ+ Sbjct: 17 VITFIVRRLLGAVVLMFV-ITAVTFAIFFLVPRAAGVTPDDLAARYAGKSPTPEALAQIK 75 Query: 54 AELGLDKPMWQQYLHYIWGVMHGD---------------LGISMKSRIPVWEEFVPRFQA 98 LGLD+P+ QY ++ ++ GD LG S ++ PV EE + R Sbjct: 76 ERLGLDEPVAVQYGLFVKALVLGDTYDTGTAEIECPAPCLGYSFRTSTPVLEEILSRAPV 135 Query: 99 TLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSV 158 TL + + A + G+ +GVL+A++RGS+FD A+ AL G S+PIF+ G++ + V Sbjct: 136 TLSVALGAAVLWVIFGVGIGVLSALRRGSLFDRMAMVTALAGVSLPIFFTGLLSLAFVVH 195 Query: 159 HWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA 218 W P V PLT D A W + +ILP I L + A Sbjct: 196 AWGWLPSPSYV----------PLTK----DPAGW---------FSGLILPWITLAFLYAA 232 Query: 219 VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGA 278 + R+TR+ MLE + ED+IRTARAKGL V++ H LR A+ P++TV GL +G LL GA Sbjct: 233 MYARLTRAGMLETMNEDFIRTARAKGLPERTVVVKHGLRAALTPLLTVFGLDLGVLLGGA 292 Query: 279 ILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +LTE FS GLG+ +D + + D PVV G VL A ++L NL+VD+LYGVV+PR+RH Sbjct: 293 VLTEKTFSLKGLGQLSLDGVIQSDLPVVLGVVLFAALFVVLANLIVDILYGVVDPRVRHS 352 >UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane component n=9 Tax=Proteobacteria RepID=C0Q387_SALPC Length = 321 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 116/338 (34%), Positives = 182/338 (53%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FILRR IPT + ++F + + PG P GER + PE A + A+ L+ Sbjct: 16 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGERALPPEVLANIEAKYHLND 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVP-RFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ + HGD G S K + + V F + +LG A + A +G+ GV Sbjct: 73 PIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGAAAFLLAVIIGVSAGV 132 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + +D+T +G A+TG +P F +L+M+ ++ P G Sbjct: 133 IAALKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQWLPGGG------------ 180 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 W A+ MILP + L +A I R+TR SM+EVL ++IRT Sbjct: 181 ------------WNGG-----ALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R+I HAL+ A+LPV++ +G ++ G+++ ETI+ PG+G+ ++ Sbjct: 224 ARAKGLPMRRIIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V +LV + IL N +VD+LY V++P+IR+ Sbjct: 284 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 321 >UniRef50_D1C490 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C490_SPHTD Length = 309 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 123/341 (36%), Positives = 195/341 (57%), Gaps = 39/341 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I+ RL ++++TF +H+ PGDPV + GE ++ E+ L + GLD+ Sbjct: 1 MLRYIVVRLAQGALAIFLVSVVTFGLMHLAPGDPVSLFVGEAQVTQEQVDMLRRKWGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISM-----KSRIPVWEEFVPRFQATLELGVCAMIFATAVGI 115 P++QQYL ++ ++ GD G S+ S + +E P T++L + A+ F+ A+ I Sbjct: 61 PVYQQYLRWLGNLLRGDFGESLIVRPGASVADIIKEAAP---LTIKLNLLALFFSVALAI 117 Query: 116 PVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL 175 P G++A +KR S+FD+ +V + G ++P FW ++ I++ P G S Sbjct: 118 PAGIVAGLKRNSLFDYVSVVASTLGVALPNFWVALVSIIIFGSMLGWLPTYGLSS----- 172 Query: 176 DDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 TG+ ILP VL AV+ R+ R + EVLG++ Sbjct: 173 -----WTGY---------------------ILPVAVLALDQTAVLTRLMRGATQEVLGQE 206 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 Y+ TARAKGL + ++ H +RNA+LP+VTVIG ++ LL+G I+ ET+F+ PG+GR I Sbjct: 207 YVTTARAKGLGQAALLSRHVVRNALLPIVTVIGYRIAFLLSGTIVIETVFALPGIGRVFI 266 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +++ R DY VVQ VLL+A +++L NLL DL+Y V+PRIR Sbjct: 267 NSVYRFDYQVVQAVVLLLAIVVVLGNLLTDLVYTYVDPRIR 307 >UniRef50_Q18K39 ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18K39_HALWD Length = 319 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 113/314 (35%), Positives = 183/314 (58%), Gaps = 24/314 (7%) Query: 24 FAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMK 83 F V +PGDP ++ G P+ A + AELGL++P+ QYL ++ ++ D G S+ Sbjct: 26 FVAVRSVPGDPARLVLGGTA-EPDALAAVRAELGLNQPLHIQYLRWMSDLVTADFGTSIY 84 Query: 84 SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSM 143 + V + + TL +G+ +I A + IP G+++A +R DH A G+A G SM Sbjct: 85 TGEAVLSRILGAAEPTLSIGLIGIIIALFISIPAGIISATRRSQWEDHVATGIAFLGISM 144 Query: 144 PIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVA 203 P FW G++L++ V S P G+ I+ + + ++ Sbjct: 145 PSFWIGIVLLLTVGTAI----------------PSIPSYGYAPINEGL-------LSWLS 181 Query: 204 HMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPV 263 H+ILP + +G ++ RMTRSSMLEVL +DY++TARAKGL+ V++ H L+NA+LPV Sbjct: 182 HIILPGLAVGLPYAGILTRMTRSSMLEVLNQDYMQTARAKGLSPRLVLLKHGLQNALLPV 241 Query: 264 VTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLL 323 VT+ G+ LLAG + E +F G GR LI +++R+D+P+VQG V++++ + + +NL Sbjct: 242 VTIAGILFALLLAGIVAVEIVFGIQGFGRLLIRSIERQDFPLVQGSVIVISIIFVFMNLF 301 Query: 324 VDLLYGVVNPRIRH 337 +DL+Y +NP+IR+ Sbjct: 302 IDLVYMSINPKIRY 315 >UniRef50_D0B8C5 Binding-protein-dependent transport system inner membrane component n=33 Tax=Brucella RepID=D0B8C5_BRUME Length = 336 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/338 (33%), Positives = 184/338 (54%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+ +RLG + + + +LTFA ++P DP +AG+ S E ++ +ELGLD+ Sbjct: 1 MVAFLAKRLGWGLAVLLSVGVLTFALARLVPADPASFLAGQNA-STETVERIRSELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Q+ Y G++ GDLG S+++ PV E+ ATLEL + + + +L Sbjct: 60 PALEQFASYFTGILRGDLGQSIRTGRPVAEDLAQFLPATLELMIAGFFLYMLISFGLALL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A K + D + + + G +P+FW GM L + P+S R + + + P Sbjct: 120 ALRKPDGMLDKSVRLVTMLGTGIPVFWLGMGLQFIFFYKLGWLPLSSRFP-VREIAPAGP 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TGF+LIDT + G F A+ H+ LPA+ + LAV R+TRS++L+ + Y+RTA Sbjct: 179 -TGFLLIDTLVAGNLRGFGLALQHLCLPALTIVMNLLAVGTRLTRSTLLDEREQPYVRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 KGLT +++ H LRNA P++ +Q G L++ ++ E IF WPG+G + + Q Sbjct: 238 LGKGLTGRSILLKHMLRNAANPILVTTSMQFGYLISWILMVEVIFEWPGIGLYAYKSFQL 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V L+ +++NL VDL+ +++PRIR Sbjct: 298 FDYAPVIALALVSTAGFVIINLAVDLVQPLIDPRIRKS 335 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AEG0 Dipeptide transport system permease protein dppB... 460 e-128 UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria Rep... 433 e-120 UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella l... 415 e-114 UniRef50_P94311 Dipeptide transport system permease protein dppB... 411 e-113 UniRef50_P42062 Oligopeptide transport system permease protein a... 402 e-110 UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteri... 400 e-110 UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD 400 e-110 UniRef50_D2LLS4 Binding-protein-dependent transport systems inne... 395 e-109 UniRef50_C0GHX4 Binding-protein-dependent transport systems inne... 395 e-109 UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipep... 393 e-108 UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport... 390 e-107 UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepI... 388 e-106 UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport... 386 e-106 UniRef50_B9L1W1 Dipeptide transport system permease protein dppB... 385 e-105 UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette t... 385 e-105 UniRef50_A6TS96 Binding-protein-dependent transport systems inne... 384 e-105 UniRef50_Q0T6D1 Glutathione transport system permease protein gs... 383 e-105 UniRef50_C8WR99 Binding-protein-dependent transport systems inne... 381 e-104 UniRef50_A0LI52 Binding-protein-dependent transport systems inne... 381 e-104 UniRef50_Q28JR5 Binding-protein-dependent transport systems inne... 380 e-104 UniRef50_D1Y6N0 Oligopeptide transport system permease protein A... 380 e-104 UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport... 379 e-104 UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport... 378 e-103 UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepI... 377 e-103 UniRef50_B8E2R5 Binding-protein-dependent transport systems inne... 377 e-103 UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerot... 377 e-103 UniRef50_A6TPC4 Binding-protein-dependent transport systems inne... 377 e-103 UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=... 376 e-103 UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacte... 375 e-103 UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH 374 e-102 UniRef50_A8F6T0 Binding-protein-dependent transport systems inne... 374 e-102 UniRef50_B3EH22 Binding-protein-dependent transport systems inne... 374 e-102 UniRef50_D1B7J8 Binding-protein-dependent transport systems inne... 373 e-102 UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostri... 373 e-102 UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepI... 373 e-102 UniRef50_A9WKA7 Binding-protein-dependent transport systems inne... 372 e-101 UniRef50_UPI0001C354AE putative ABC-transporter permease protein... 371 e-101 UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteri... 370 e-101 UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncult... 369 e-101 UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC trans... 369 e-101 UniRef50_D2RRT8 Binding-protein-dependent transport systems inne... 369 e-101 UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n... 369 e-101 UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclass... 369 e-101 UniRef50_D1C9Y6 Binding-protein-dependent transport systems inne... 369 e-101 UniRef50_A1WQT8 Binding-protein-dependent transport systems inne... 369 e-100 UniRef50_C9M8R7 Glutathione ABC transporter, permease protein Gs... 368 e-100 UniRef50_A6M0G0 Binding-protein-dependent transport systems inne... 368 e-100 UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzi... 368 e-100 UniRef50_D2ASJ6 Binding-protein-dependent transport systems inne... 368 e-100 UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Ba... 368 e-100 UniRef50_D1C9E9 Binding-protein-dependent transport systems inne... 367 e-100 UniRef50_UPI00019735EB peptide ABC transporter permease protein ... 367 e-100 UniRef50_A9B5L6 Binding-protein-dependent transport systems inne... 366 e-100 UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Ta... 366 e-100 UniRef50_A8F4X4 Binding-protein-dependent transport systems inne... 365 e-100 UniRef50_A6X362 Binding-protein-dependent transport systems inne... 365 2e-99 UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerot... 364 2e-99 UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oc... 364 2e-99 UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component... 364 2e-99 UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostri... 363 5e-99 UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Breviba... 363 5e-99 UniRef50_D1C940 Binding-protein-dependent transport systems inne... 363 6e-99 UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41... 362 1e-98 UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=... 361 2e-98 UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipe... 361 3e-98 UniRef50_Q2YJK1 Putative peptide transport system permease prote... 361 3e-98 UniRef50_B9ZI20 Binding-protein-dependent transport systems inne... 360 3e-98 UniRef50_Q1ARP2 Binding-protein-dependent transport systems inne... 360 3e-98 UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteob... 360 3e-98 UniRef50_Q6ML30 Dipeptide transport system permease protein DppB... 360 4e-98 UniRef50_A8U4H5 Binding-protein-dependent transport systems inne... 360 4e-98 UniRef50_D1C147 Binding-protein-dependent transport systems inne... 359 6e-98 UniRef50_C5BVI8 Binding-protein-dependent transport systems inne... 358 1e-97 UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicu... 358 2e-97 UniRef50_A6TTE0 Binding-protein-dependent transport systems inne... 358 2e-97 UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdema... 357 3e-97 UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter... 357 3e-97 UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bac... 357 3e-97 UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n... 357 4e-97 UniRef50_B3QZ99 Binding-protein-dependent transport systems inne... 356 6e-97 UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostri... 356 6e-97 UniRef50_A1WN48 Binding-protein-dependent transport systems inne... 355 1e-96 UniRef50_C6WWB7 Binding-protein-dependent transport systems inne... 355 1e-96 UniRef50_Q1GD19 Binding-protein-dependent transport systems inne... 355 2e-96 UniRef50_B3TCI4 Putative binding-protein-dependent transport sys... 354 2e-96 UniRef50_C7P3N9 Binding-protein-dependent transport systems inne... 354 3e-96 UniRef50_Q53191 Probable peptide ABC transporter permease protei... 354 3e-96 UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax... 354 4e-96 UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein A... 354 4e-96 UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Ta... 353 6e-96 UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport... 353 8e-96 UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11... 352 1e-95 UniRef50_B9ZIL3 Binding-protein-dependent transport systems inne... 352 1e-95 UniRef50_B2SC63 Binding-protein-dependent transport systems inne... 351 2e-95 UniRef50_A8F7V7 Binding-protein-dependent transport systems inne... 351 2e-95 UniRef50_B8J041 Binding-protein-dependent transport systems inne... 351 3e-95 UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport... 350 4e-95 UniRef50_D1WR30 Binding-protein-dependent transport systems inne... 350 5e-95 UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n... 349 7e-95 UniRef50_B9LRN3 Binding-protein-dependent transport systems inne... 349 9e-95 UniRef50_A4F975 ABC-transport protein, membrane component n=2 Ta... 349 9e-95 UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bactero... 349 1e-94 UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligo... 349 1e-94 UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC trans... 349 1e-94 UniRef50_B3TC47 Putative binding-protein-dependent transport sys... 348 1e-94 UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 ... 348 1e-94 UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT f... 348 1e-94 UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane c... 348 2e-94 UniRef50_D1CA61 Binding-protein-dependent transport systems inne... 348 2e-94 UniRef50_UPI0000E87C5E peptide ABC transporter, permease protein... 348 2e-94 UniRef50_C8Q8F0 Binding-protein-dependent transport systems inne... 347 3e-94 UniRef50_A4J1I5 Binding-protein-dependent transport systems inne... 347 4e-94 UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 ... 347 4e-94 UniRef50_C0G1A9 Binding-protein-dependent transport systems inne... 347 4e-94 UniRef50_UPI0001C31351 binding-protein-dependent transport syste... 346 6e-94 UniRef50_A9EE52 Binding-protein-dependent transport systems inne... 346 6e-94 UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Ta... 346 8e-94 UniRef50_Q5E4F5 Oligopeptide transport system permease protein O... 345 1e-93 UniRef50_Q211A7 Binding-protein-dependent transport systems inne... 345 1e-93 UniRef50_D1C3Y0 Binding-protein-dependent transport systems inne... 345 2e-93 UniRef50_A1SP55 Binding-protein-dependent transport systems inne... 345 2e-93 UniRef50_A1WJE8 Binding-protein-dependent transport systems inne... 344 2e-93 UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease... 344 3e-93 UniRef50_Q67T60 Oligopeptide ABC transporter permease protein n=... 344 3e-93 UniRef50_B9ZIB5 Binding-protein-dependent transport systems inne... 344 3e-93 UniRef50_B9L4I6 Oligopeptide transport system permease protein A... 343 4e-93 UniRef50_C7RF10 Binding-protein-dependent transport systems inne... 343 5e-93 UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport... 343 6e-93 UniRef50_C6A3B4 ABC-type dipeptide transport system, permease co... 343 6e-93 UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 ... 343 7e-93 UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette t... 342 1e-92 UniRef50_A7NQN2 Binding-protein-dependent transport systems inne... 341 1e-92 UniRef50_B9JQI2 Inner membrane component of binding-protein-depe... 341 2e-92 UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax... 341 2e-92 UniRef50_C0GIS4 Binding-protein-dependent transport systems inne... 341 2e-92 UniRef50_O58538 323aa long hypothetical oligopeptide transport p... 341 2e-92 UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n... 341 2e-92 UniRef50_P77308 Probable D,D-dipeptide transport system permease... 341 3e-92 UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease... 340 4e-92 UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobac... 340 4e-92 UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Ta... 340 5e-92 UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bact... 340 5e-92 UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropy... 340 5e-92 UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collins... 340 5e-92 UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport... 340 5e-92 UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, memb... 339 6e-92 UniRef50_B6JJN3 Dipeptide transport system permease protein DppB... 339 6e-92 UniRef50_A9KKM2 Binding-protein-dependent transport systems inne... 339 8e-92 UniRef50_C4WPU5 Dipeptide transport system permease protein dppB... 339 9e-92 UniRef50_Q1LMX8 Binding-protein-dependent transport systems inne... 339 1e-91 UniRef50_C9M9U0 Oligopeptide ABC transporter, permease protein n... 339 1e-91 UniRef50_A8Z099 Oligopeptide ABC superfamily ATP binding cassett... 339 1e-91 UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Ta... 339 1e-91 UniRef50_C1DVB5 Oligopeptide transport system permease protein A... 337 3e-91 UniRef50_Q28NH1 Binding-protein-dependent transport systems inne... 337 3e-91 UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Acidul... 337 4e-91 UniRef50_Q28M48 Binding-protein-dependent transport systems inne... 337 4e-91 UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizob... 337 4e-91 UniRef50_A6X471 Binding-protein-dependent transport systems inne... 336 6e-91 UniRef50_C5ET18 Oligopeptide transport system permease protein a... 336 6e-91 UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9A... 336 6e-91 UniRef50_Q6MQU8 Peptide ABC transporter, permease protein n=1 Ta... 336 6e-91 UniRef50_A9BP21 Binding-protein-dependent transport systems inne... 336 6e-91 UniRef50_Q1GIR9 Binding-protein-dependent transport systems inne... 336 7e-91 UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bact... 336 7e-91 UniRef50_C7Q863 Binding-protein-dependent transport systems inne... 336 8e-91 UniRef50_Q11BX9 Binding-protein-dependent transport systems inne... 336 9e-91 UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteo... 335 1e-90 UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID... 335 1e-90 UniRef50_A8M8L4 Binding-protein-dependent transport systems inne... 335 1e-90 UniRef50_P24138 Oligopeptide transport system permease protein o... 335 1e-90 UniRef50_Q3J951 ABC transporter, inner membrane subunit n=9 Tax=... 335 2e-90 UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 T... 334 4e-90 UniRef50_A9BGI2 Binding-protein-dependent transport systems inne... 333 4e-90 UniRef50_A6X1T0 Binding-protein-dependent transport systems inne... 333 5e-90 UniRef50_B1XIM7 Binding-protein-dependent transport systems inne... 333 5e-90 UniRef50_Q2FPT2 Binding-protein-dependent transport systems inne... 333 5e-90 UniRef50_A1T284 Binding-protein-dependent transport systems inne... 333 7e-90 UniRef50_C7QKP4 Binding-protein-dependent transport systems inne... 333 7e-90 UniRef50_Q0BY86 Oligopeptide ABC transporter, permease protein n... 333 8e-90 UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligo... 332 1e-89 UniRef50_D1Y243 Oligopeptide transport system permease protein A... 332 1e-89 UniRef50_A6NRE3 Putative uncharacterized protein n=2 Tax=Bacteri... 332 1e-89 UniRef50_Q11FQ8 Binding-protein-dependent transport systems inne... 331 2e-89 UniRef50_Q73QP9 Oligopeptide/dipeptide ABC transporter, permease... 331 2e-89 UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter... 331 2e-89 UniRef50_A6M358 Binding-protein-dependent transport systems inne... 331 3e-89 UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligo... 330 4e-89 UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B... 330 4e-89 UniRef50_C7Q7C7 Binding-protein-dependent transport systems inne... 330 5e-89 UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostri... 330 5e-89 UniRef50_C2KYW2 Oligopeptide ABC superfamily ATP binding cassett... 330 5e-89 UniRef50_A0QRE3 Dipeptide transport system permease protein DppB... 330 5e-89 UniRef50_Q98AA8 ABC transporter, permease n=1 Tax=Mesorhizobium ... 329 6e-89 UniRef50_UPI0001C31B38 binding-protein-dependent transport syste... 329 6e-89 UniRef50_UPI0001C313C7 binding-protein-dependent transport syste... 329 6e-89 UniRef50_B9KBE7 Oligopeptide ABC transporter, permease protein n... 329 9e-89 UniRef50_D1CFB1 Binding-protein-dependent transport systems inne... 329 9e-89 UniRef50_A9EXW6 Binding-protein-dependent transport systems inne... 329 1e-88 UniRef50_B9JNQ5 Dipeptide ABC transporter n=8 Tax=Rhizobiales Re... 329 1e-88 UniRef50_D0GM08 Oligopeptide ABC transporter, permease protein A... 329 1e-88 UniRef50_Q47XM7 Peptide ABC transporter, permease protein n=1 Ta... 329 1e-88 UniRef50_C7G7D5 Oligopeptide ABC transporter, permease protein A... 329 1e-88 UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=... 329 1e-88 UniRef50_A8F7C8 Binding-protein-dependent transport systems inne... 329 1e-88 UniRef50_A3ZVY1 Oligopeptide ABC transporter permease protein n=... 328 1e-88 UniRef50_Q7MPW1 ABC-type transport system, permease component n=... 328 2e-88 UniRef50_B2A0S4 Binding-protein-dependent transport systems inne... 328 2e-88 Sequences not found previously or not previously below threshold: UniRef50_D1Y1A5 Probable D,D-dipeptide transport system permease... 380 e-104 UniRef50_D1CAI4 Binding-protein-dependent transport systems inne... 376 e-103 UniRef50_Q9V2D1 Binding protein-dependent transport system, inne... 373 e-102 UniRef50_C0ZDH7 ABC transporter permease protein n=2 Tax=Breviba... 371 e-101 UniRef50_C8W4W6 Binding-protein-dependent transport systems inne... 369 e-100 UniRef50_C4WPT9 Dipeptide transport system permease protein dppB... 367 e-100 UniRef50_D1Y609 ABC transporter, permease protein n=1 Tax=Pyrami... 367 e-100 UniRef50_A2SRD5 Binding-protein-dependent transport systems inne... 365 1e-99 UniRef50_A6TPV5 Binding-protein-dependent transport systems inne... 364 2e-99 UniRef50_C5EKW0 Glutathione transport system permease protein gs... 363 5e-99 UniRef50_C0D8X7 Putative uncharacterized protein n=2 Tax=Clostri... 361 3e-98 UniRef50_C0QDJ0 DppB1 n=74 Tax=Bacteria RepID=C0QDJ0_DESAH 360 4e-98 UniRef50_B0PE95 Putative uncharacterized protein n=1 Tax=Anaerot... 358 2e-97 UniRef50_A4XIA7 Nickel-transporting ATPase n=21 Tax=Firmicutes R... 356 8e-97 UniRef50_UPI0001C36066 binding-protein-dependent transport syste... 353 5e-96 UniRef50_Q46ER9 Oligopeptide ABC transporter, permease protein n... 351 3e-95 UniRef50_D1CEI4 Binding-protein-dependent transport systems inne... 349 6e-95 UniRef50_C9RY28 Binding-protein-dependent transport systems inne... 348 2e-94 UniRef50_A8S2V4 Putative uncharacterized protein n=1 Tax=Clostri... 345 1e-93 UniRef50_A3IB67 Dipeptide transport system permease protein dppB... 345 1e-93 UniRef50_B8F5L4 ABC-type oligopeptide transport system, periplas... 345 1e-93 UniRef50_A7NQN7 Binding-protein-dependent transport systems inne... 342 9e-93 UniRef50_Q65HR2 Oligopeptide ABC transporter (Permease) n=2 Tax=... 341 2e-92 UniRef50_A6UUC5 Binding-protein-dependent transport systems inne... 341 2e-92 UniRef50_P0AFH4 Oligopeptide transport system permease protein o... 341 3e-92 UniRef50_B1MFX6 Probable dipeptide-transport integral membrane p... 340 4e-92 UniRef50_C8W528 Binding-protein-dependent transport systems inne... 337 3e-91 UniRef50_A6UJW3 Binding-protein-dependent transport systems inne... 337 3e-91 UniRef50_B2Z3S7 ABC transporter permease protein n=3 Tax=Rhizobi... 337 4e-91 UniRef50_D0RFR0 Binding-protein-dependent transport system inner... 334 2e-90 UniRef50_Q3IPR7 ABC-type transport system permease protein (Prob... 334 2e-90 UniRef50_C0AEM4 Nickel-transporting ATPase n=1 Tax=Opitutaceae b... 334 4e-90 UniRef50_B0PEI0 Putative uncharacterized protein n=1 Tax=Anaerot... 333 5e-90 UniRef50_Q21J40 Binding-protein-dependent transport systems inne... 333 8e-90 UniRef50_C3WH40 Peptide ABC transporter permease n=6 Tax=Fusobac... 332 1e-89 UniRef50_D1A5X3 Binding-protein-dependent transport systems inne... 331 2e-89 UniRef50_Q46AX7 ABC transporter, permease protein n=3 Tax=Methan... 331 2e-89 UniRef50_C4ZGE2 Putative uncharacterized protein n=1 Tax=Eubacte... 331 2e-89 UniRef50_A8HT90 Peptide ABC transporter permease protein n=32 Ta... 331 3e-89 UniRef50_C9KNL5 Oligopeptide ABC transporter, permease protein A... 329 8e-89 UniRef50_B9K0P3 ABC transporter membrane spanning protein (Oligo... 329 1e-88 UniRef50_B6JJM3 Inner membrane ABC transporter permease protein ... 328 2e-88 >UniRef50_P0AEG0 Dipeptide transport system permease protein dppB n=302 Tax=Bacteria RepID=DPPB_ECO57 Length = 339 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK Sbjct: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL Sbjct: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA Sbjct: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 >UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria RepID=A6VRH6_MARMS Length = 336 Score = 433 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 217/339 (64%), Positives = 281/339 (82%), Gaps = 3/339 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI RRL LVIPTFIGITLLTF + +IPGDP+ +MAGERG+S ERHA+L A+LG D+ Sbjct: 1 MFQFIFRRLSLVIPTFIGITLLTFTLIRLIPGDPIEVMAGERGVSAERHAELSAQLGFDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY HY+ GV+ GDLG S+ +R PV +EF+ F AT+EL CA IFA +G+P G+ Sbjct: 61 PLYVQYYHYVTGVLQGDLGNSLITREPVMKEFLTLFPATIELAFCAAIFAILIGLPAGIF 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRG++ DH+ + +LTGYSMPIFWW ++L+++ SV+ TPVSGR+ + ++DD Sbjct: 121 AAVKRGTVIDHSVMTFSLTGYSMPIFWWALLLMLVFSVNLGWTPVSGRIDVVYWIDD--- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGFMLID+ + GE+G F AV+H+ILP+IVLGTIP+AVI RMTRSSMLEVL EDYIRTA Sbjct: 178 VTGFMLIDSILSGEEGAFASAVSHLILPSIVLGTIPMAVIARMTRSSMLEVLSEDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI++HALRNA++PV+TVIGLQVG LL+GAILTET+F+WPG+G+WLI+++ R Sbjct: 238 RAKGIAPWRVIVIHALRNALIPVITVIGLQVGILLSGAILTETVFAWPGIGKWLIESIGR 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGG+L+VA +II+VNLLVD+ YG+VNPRIRH + Sbjct: 298 RDYPVVQGGILIVACIIIVVNLLVDITYGIVNPRIRHSR 336 >UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGF2_EGGLE Length = 339 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 161/338 (47%), Positives = 231/338 (68%), Gaps = 4/338 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++IL+R+ +VIP +G+T++ F ++ DP ++ GE + E A A+ GLD Sbjct: 1 MLKYILKRILMVIPVLLGVTVIIFLITRVLAPDPAPVVLGEHATT-EAMAAWRADNGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY+++I G + G+LG S + PV E RF AT EL +CA+I A+ VG+ +GVL Sbjct: 60 PIWLQYINFIVGALQGNLGTSYYTHQPVTAEIAARFPATAELAICAIIVASIVGVALGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ D+ ++ +AL G SMPIFW G++LI+L S + P SGRVS ++ Sbjct: 120 AAVKKNKAADNVSMLIALVGVSMPIFWSGILLILLFSGILHWLPSSGRVSPLLQPSGG-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TGF ++DT + G D + H+ILP + L +A+I RMTRSSMLE L DYIRTA Sbjct: 178 -TGFFILDTIMQGNWAGLADVLVHLILPTLALSLYSMAIITRMTRSSMLETLNADYIRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL++ V I HALRNAMLPV TVIGLQ G+LL GA+LTET+F+WPG+G++ +D + + Sbjct: 237 RAKGLSKGSVNIKHALRNAMLPVSTVIGLQFGSLLGGALLTETVFAWPGIGKFAVDCVLK 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+PVVQG VLLVA + +++NL+VD++Y ++PRI++ Sbjct: 297 SDFPVVQGIVLLVAVIFVIMNLVVDIVYAYLDPRIKYG 334 >UniRef50_P94311 Dipeptide transport system permease protein dppB n=8 Tax=Bacteria RepID=DPPB_BACPF Length = 333 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 163/337 (48%), Positives = 229/337 (67%), Gaps = 4/337 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RRL L+IP IG+T++TF+ +H+IPG+P + GE+ SP+ A L LGL++ Sbjct: 1 MLAYAMRRLLLLIPVLIGMTIVTFSIIHLIPGNPAQTILGEQA-SPQAIADLEERLGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W QY Y+ + GDLG S+++ P+ EE P AT+EL + AMIFA +G+ G++ Sbjct: 60 PYWVQYGLYMKDLATGDLGTSLRTNKPIMEEIWPYLAATIELTIFAMIFAIIIGVNAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ S FD+ ++ +AL G SMPIFW +M + + P GR + D Sbjct: 120 SAWKQNSWFDYLSMFIALVGVSMPIFWLALMEQWIFAQELGWLPAFGRDNPR---DPIIS 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG + DT I G+ +++ H+ILP I LGTIP+A+I RMTRSSMLEVL DYIRT Sbjct: 177 TTGLYVFDTIISGQFDKTWESIKHLILPGIALGTIPMAIIARMTRSSMLEVLRSDYIRTV 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG + VI HAL+NA++PV+TV+GLQ G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 237 NAKGSGQGVVIYKHALKNALIPVLTVVGLQTGNLLGGAILTETIFSWPGIGRYIFEAINY 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+Q G+L+VAT+ +L+NL VDLLY ++PRI++ Sbjct: 297 RDYPVIQSGILVVATIFVLINLFVDLLYSYIDPRIKY 333 >UniRef50_P42062 Oligopeptide transport system permease protein appB n=4 Tax=Bacillaceae RepID=APPB_BACSU Length = 316 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RR + IP +GIT+L+F + PGDP+ +M + IS Q + + GL+ Sbjct: 1 MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMTLMM-DPKISQADREQFIEKYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + QYL ++ ++ GD G S+ + PV E + R TL L + + I A + IP GV Sbjct: 60 PQYVQYLKWLGNMVQGDFGTSIVRKGTPVSELIMARLPNTLLLMLVSTILALMISIPFGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW+G++LIM++SV+ P G + Sbjct: 120 LSAKRPYSKIDYGITFTSFIGLAIPNFWFGLILIMVLSVNLGWFPTGGVETLNTEF---- 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 N D + H+ILPA VL T +A + R TRS+ML+VL +DYIRT Sbjct: 176 -----------------NIFDRIHHLILPAFVLATADMAGLTRYTRSNMLDVLNQDYIRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRNA+LPV+T+ GL + + + G+++ E IF+WPGLG+ +D+ Sbjct: 219 ARAKGFKENRVLFKHGLRNALLPVITIFGLMIPSFIGGSVVVEQIFTWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ A ++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISAVLVVVGNLIADILYAIVDPRIEY 316 >UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NZV2_9BACE Length = 337 Score = 400 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 134/338 (39%), Positives = 216/338 (63%), Gaps = 4/338 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I +RL IP + + ++ F ++PGDP GE + E+ QL E GL+ P Sbjct: 3 LKYIAKRLLYAIPAVVLVVIIIFLLTRVMPGDPARAYLGEMA-TEEQVEQLREEWGLNDP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q++ Y+ G++HGD G S ++ V +F+ R A+LEL + A+ A +G+P+G+ + Sbjct: 62 LPVQFVRYVSGILHGDFGYSNRTHDTVLNDFIKRIPASLELALWALAIAILIGVPLGIAS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPV-SGRVSDMVFLDDSNP 180 A + S DH A ++ G +MP+FW+G+MLI++ + T +GR+S + ++ Sbjct: 122 ATHKNSPLDHGARIFSMLGATMPVFWFGLMLILIFYATLHWTVAPTGRIS--MGINPPTT 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ++D+ + G+ D++AH+ILPAI L +AV+ RMTR+SMLEVLG+DYIRTA Sbjct: 180 ITGMYVLDSILTGDMVALKDSLAHIILPAITLSMSTMAVMARMTRASMLEVLGQDYIRTA 239 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P++TV+G Q G +L ++ ETIFSWPG+G ++ DA+ Sbjct: 240 RAKGMKERIVIYRHALRNALIPILTVLGGQFGMMLGYTVVVETIFSWPGIGFYVTDAILN 299 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY VQ L A + +++NL++D+LY VV+ R+++ Sbjct: 300 VDYNPVQAFALFSALLYVVINLVLDILYTVVDRRVKYD 337 >UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD Length = 316 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 199/338 (58%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I+RR + IP GIT+L+FA + PGDP+ +M + IS + + + GLD+ Sbjct: 1 MITYIIRRTLMSIPILFGITILSFAIMKAAPGDPMALMM-DPTISAGDREKFIEKYGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P QYL ++ ++ GD G S+ + PV + + R TL L + + I A + IP+GV Sbjct: 60 PEHVQYLKWLGNMVQGDFGTSIVRKGTPVTDLIMARLPNTLLLMLVSTILALLISIPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW G++LIM ++V+ P G ++ Sbjct: 120 LSARRPYSKLDYGITFTSFIGLAVPNFWLGLILIMFLAVNLGWFPTGGVMTLNA------ 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D + D + H+ILPA VL T +A + R TRSSML+VL +DY+RT Sbjct: 174 ---------------DFSLWDRIHHLILPAFVLATADMAGLTRYTRSSMLDVLRQDYMRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRN +LPV+T+ GL + + + GA++TE IFSWPGLG+ +D+ Sbjct: 219 ARAKGFKENRVVYKHGLRNGLLPVITIFGLMIPSFIGGAVVTEQIFSWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ AT++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISATLVVIGNLVADILYAMVDPRIEY 316 >UniRef50_D2LLS4 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Euryarchaeota RepID=D2LLS4_9EURY Length = 335 Score = 395 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 148/338 (43%), Positives = 209/338 (61%), Gaps = 6/338 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 Q+I+RRL L+ P IG+TL+TF +IP DP AG++ P ++ E L+ P Sbjct: 4 WQYIVRRLLLLFPVIIGVTLITFTISFVIPADPARAWAGQKA-PPSVVEKIRIEYHLNDP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 ++ QY +YI GV G+ G S + PV + F AT EL + AM A GI +GV++ Sbjct: 63 IYVQYYYYITGVFTGNWGYSHSEKRPVAQCLANYFPATFELTLWAMAIAIPTGIYLGVVS 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AVKR I DH + AL+G SMPIFW G++LI+L + P SGR + + Sbjct: 123 AVKRNKIPDHLSRVFALSGVSMPIFWLGLLLILLFYTYLGWLPASGR-----GIPPRHIY 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG ++D+ + + F+ + H+ILP+I L LAVI RMTRSSMLEVL DYI+TA+ Sbjct: 178 TGLWILDSILSLDWHAFVVDLRHIILPSITLSYATLAVITRMTRSSMLEVLRLDYIKTAK 237 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ VI HALRNA++P +TV GL LL GA+LTETIF+WPG+GR+ A+ Sbjct: 238 AKGLSNKVVIYRHALRNALIPTLTVSGLAFAGLLGGAVLTETIFAWPGMGRYAYQAISTL 297 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYP + G LL+A + ++ NL+VD++Y ++PRI+ + Sbjct: 298 DYPAIMGVTLLMAIIFVIGNLIVDIMYAYLDPRIKLGE 335 >UniRef50_C0GHX4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHX4_9FIRM Length = 329 Score = 395 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 114/338 (33%), Positives = 186/338 (55%), Gaps = 10/338 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I+RR+ + I + + I+ LTF + + PG PV A IS ++ +GLD+ Sbjct: 1 MRNKIVRRIAMSILSLLVISALTFFLMELAPGTPVSRYADNPRISRADRERIEKNMGLDR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y ++ GDLG+S + PV +E + R ATL L + + A + +P+G+ Sbjct: 61 PAHIRYFIWLRNAAQGDLGLSYMTGQPVSQEIMARLPATLRLMGASFLVALIIAVPLGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A +R SI D + G S+P FW+G++LI + +V P G+++ P Sbjct: 121 SATRRHSIVDSVLTAGSYLGLSVPAFWFGLILIYIFAVWLRWLPAGGQMTPWFDPSVFPP 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 T + + HMI+P VL +A R RSSML+V+ ++YIRTA Sbjct: 181 FT----------RPFALLWEYIRHMIMPVFVLSLSLVAGWSRYIRSSMLDVINQNYIRTA 230 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +V+ HALRNA+ P+VT++G+ + AGA++ E IF+WPG+GR + A+ Sbjct: 231 RAKGVPERKVLYRHALRNALTPLVTLMGMDLPAFFAGAVIVEQIFAWPGMGRLFLSAVTN 290 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V+ G ++ A +++ NLL DL Y ++PR++++ Sbjct: 291 NDYQVMMGITMITAILVLAGNLLADLFYTRLDPRVKYE 328 >UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Agrobacterium vitis S4 RepID=B9K0U0_AGRVS Length = 359 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 153/358 (42%), Positives = 212/358 (59%), Gaps = 23/358 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RL + IP GI ++TFA +IPGDP M GE+ + E A + G DK Sbjct: 1 MLGYAAKRLLISIPVIFGILIVTFALARLIPGDPCKAMLGEKA-TAETCAGFITRYGFDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GD G S++ PV + + R T EL V A+I AT +G+ +GV+ Sbjct: 60 PLPTQFFIYMGDMLRGDFGTSVRFSRPVTQIIIERLPMTAELAVLALITATVIGVGLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN----LTPVSGRVSDMVFLD 176 AA + S D + +A G SMP+FW G+ML L V P SGR+S V Sbjct: 120 AARRHNSAADVGTMIVANAGISMPVFWLGLMLAYLFGVMLRGTPFWLPPSGRLSAGVNSI 179 Query: 177 DS------------------NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA 218 + F +++ I G F DA+ HMILP + L TIP+A Sbjct: 180 PFYEVWHWQLAAESGWSKVLEFFSNFYILNALITGNWTVFWDAIRHMILPVMALSTIPMA 239 Query: 219 VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGA 278 VI RMTRSS+L+VLG DY+RTARAKG+ RV+ HAL NA+LPVVT++GLQ+G LL+GA Sbjct: 240 VIARMTRSSLLDVLGRDYVRTARAKGVPEKRVVSEHALGNALLPVVTILGLQMGALLSGA 299 Query: 279 ILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +LTET+F G+GR L++A+ RDYPVVQ +++A + +NLLVDL Y ++PRIR Sbjct: 300 VLTETVFGLSGVGRMLVEAIFARDYPVVQAFTVMIAVSYVAINLLVDLSYTYLDPRIR 357 >UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=17 Tax=Bacteria RepID=B7GIJ6_ANOFW Length = 354 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 154/337 (45%), Positives = 231/337 (68%), Gaps = 4/337 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + ++RL VIP +G++L+ F + IPG+P ++ G++ + E L +LGLD+ Sbjct: 21 MFSYTVKRLLTVIPVLLGMSLVVFFMIRAIPGNPAQVILGQKA-TKEAVEALTHKLGLDQ 79 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY+ Y+ G++ GDLG S+++ + V +E P ATLEL + AM A +G+ G++ Sbjct: 80 PWYVQYIKYLGGLLKGDLGESLRTGVAVSQEIWPYLAATLELSLAAMFIAVVIGVNAGII 139 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A + S FD+ A+ LAL G SMPIFW G+M + +++ + P SGR + P Sbjct: 140 SAWFQNSWFDYVAMVLALVGVSMPIFWLGLMEQWIFAINLDWFPTSGRED---VRNPIEP 196 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T +IDT + G F+ + H++LP++ L TIP+A+I RMTRSSMLEV+ DYIRTA Sbjct: 197 ITHLYVIDTLMQGHTDQFVQTLQHLVLPSVALATIPMAIIARMTRSSMLEVMKSDYIRTA 256 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ H+L+NA++PV+TVIGLQ+G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 257 RAKGLSMFWVVYKHSLKNAIIPVLTVIGLQMGLLLGGAILTETIFSWPGIGRYIYEAIGY 316 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+Q G+L+VA + I +NL+VDLLY ++PRI++ Sbjct: 317 RDYPVIQSGILIVAMIFIFINLIVDLLYAAIDPRIKY 353 >UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepID=A8F3B0_THELT Length = 320 Score = 388 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 201/336 (59%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL IPT + L F + MIPGDP M++ G + PE A+ +LGLDK Sbjct: 1 MTKYIIKRLLQAIPTLFFVILTVFLIMKMIPGDPAMVLLGPQAG-PEDIARFRQQLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GDLG S+ R V R T+ L +CA+ A +GIP G+L Sbjct: 60 PVIVQFFLYLKRILTGDLGTSLVYRQDVLSLIFERLPTTIILSICALFIAIVIGIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K S D L+L G S+PIFW+GM+LI++ S+ P G Sbjct: 120 AAIKHNSFVDLLVTSLSLIGISIPIFWFGMVLIIIFSLQLGWLPAVGTGDFS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + D ++H ILP++ LG + I R TRSSMLEVL +DYIRTA Sbjct: 172 ---------------KSIWDGLSHFILPSLALGILSTGTIARFTRSSMLEVLNQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HALRNA++PV+TVIGLQ+G LLAGA+LTET+F+ PGLG+ ++D + R Sbjct: 217 YAKGLRRHLILYRHALRNALIPVITVIGLQLGNLLAGAVLTETVFALPGLGKLMVDGIFR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY +VQG VL A M I VNL VD+ Y +NP++R Sbjct: 277 RDYMLVQGEVLFTAMMYIFVNLAVDITYAFINPKVR 312 >UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VC58_9EURY Length = 313 Score = 386 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 136/338 (40%), Positives = 216/338 (63%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++ RRL + IP IG+T++ + +++ PG+P I G P A+L ++GL++ Sbjct: 1 MLKYVTRRLLITIPVLIGVTIVISSIIYIAPGNPARIALGANAR-PAAVAELERQMGLNQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W +YL ++WGV+HG+LG S++++ V + R ATLEL + +M+ + +P+GV+ Sbjct: 60 PPWIRYLEWLWGVLHGNLGESIRTQRSVIQMIANRLPATLELALSSMVLTFIIALPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ ++ A+ SMP FW ++LI+L SV W+L P+SGR + + Sbjct: 120 SAVKQYTWADNLSMLFAIFWISMPSFWLALILILLFSVQWSLFPISGRATPVFTTA---- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPA+ GT ++ R+TRSSMLEVL EDYIRTA Sbjct: 176 --------------------WLVSLILPAVATGTRRAGLLTRITRSSMLEVLNEDYIRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R KG+ VI HA++NAM+PV+T+IGLQ+ + G+++ ET+FSWPG+GR L++++ + Sbjct: 216 RGKGIGEKSVIYTHAMKNAMIPVITLIGLQIPAIFGGSVIIETVFSWPGMGRLLVNSVLQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL+ A +++ NLLVD+ YG +PRI ++ Sbjct: 276 RDYPVVQGLVLVYAIIVVASNLLVDVAYGYFDPRIEYE 313 >UniRef50_B9L1W1 Dipeptide transport system permease protein dppB n=3 Tax=Bacteria RepID=B9L1W1_THERP Length = 338 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 155/335 (46%), Positives = 226/335 (67%), Gaps = 3/335 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDKP 61 +F+LRRL + +P +G+TL+TFA H+IP DP+M + ER P+ GLD+ Sbjct: 4 RFVLRRLLVTMPLLVGVTLVTFAVSHLIPADPLMAILPERAANDPQTVQMYRERWGLDRS 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QYL Y+ ++ GDLG S SR PV ++ RF AT+EL + AM++A +G+ +GVL+ Sbjct: 64 LPEQYLFYLRNLLRGDLGESYTSRRPVMQDLRERFPATVELALAAMLYAVTLGLTLGVLS 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ DH A +AL G S+P+FW G++ + L + L P GR+ + Sbjct: 124 AIWYERWIDHVARLVALVGVSLPVFWLGLLALQLFYANLRLLPGPGRIDPRLTAPPFR-- 181 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TGF ID+ + G+ F++ ++H++LP +VLG+ + +I RMTRS++L+VLG DYIRTAR Sbjct: 182 TGFYTIDSLLAGDWSLFLNVLSHLVLPGMVLGSYAMGIIARMTRSALLDVLGADYIRTAR 241 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL RVI+VHALRNA++P VTVIGL G+LLAGA+LTETIF+WPG+GR+ +DA + Sbjct: 242 AKGLAERRVILVHALRNALIPTVTVIGLTFGSLLAGAVLTETIFAWPGIGRYAVDAAMKL 301 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P V G LL+A + ++VN L D+LYG+++PRIR Sbjct: 302 DLPAVLGVTLLIAVVYVVVNFLTDVLYGMLDPRIR 336 >UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein n=5 Tax=Bacteria RepID=A8FB89_BACP2 Length = 348 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 227/336 (67%), Gaps = 4/336 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + ++R G++IP IG+TL+ F+ + IPG+P ++ G+R + E QL +LGL++P Sbjct: 17 FAYCMKRAGMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRA-TKEAVEQLTIQLGLNQP 75 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY HY+ G++ GDLG S+++ + +E P ATLEL AM+ A VG+ G+++ Sbjct: 76 WYVQYGHYMLGLLKGDLGTSIRTGAAIAQEMKPYLFATLELTFFAMVLAIVVGVNAGIIS 135 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + S FD+ A+ +AL G SMPIFW G+M L S+ W + P +GR + + Sbjct: 136 AWFKHSFFDYVAMFIALIGVSMPIFWLGLMGQWLFSIEWGILPTTGR---ENVRNPVESI 192 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 T +DT + G F D++ H+ILP+ L TIP A+I R+TR+SMLEVL D+IRTA+ Sbjct: 193 TYIHTLDTLLQGRFDQFTDSIKHLILPSTALATIPAAIIARITRASMLEVLHSDFIRTAK 252 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+ +I H L+NA++P++T+IGLQ G LL GAILTETIF+WPG+GR++ DA+ R Sbjct: 253 AKGVRSFFIIYQHGLKNALIPILTIIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYR 312 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+Q G+L+VA + +L+N +VD+LY V++PRI++ Sbjct: 313 DYPVIQTGILVVALIFVLINFIVDILYAVIDPRIKY 348 >UniRef50_A6TS96 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Clostridia RepID=A6TS96_ALKMQ Length = 321 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 125/338 (36%), Positives = 191/338 (56%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL IP IG+++L FA + PG P+ + ++ E+ QL GL++ Sbjct: 1 MGKYILRRLFQQIPILIGVSILLFAIFQLAPGSPLASFYMDPSMTSEQMEQLEEAYGLNR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ GV+ G+LG S + R PV R T + ++ + + IP+GV+ Sbjct: 61 PVHLQYVDYMRGVVVGNLGTSFQLRQPVSTLIGERMWTTFYISFVSLFISLMIAIPIGVI 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ SIFD+ AL G S+PIF++ ++LI + P+SG + Sbjct: 121 SATKQYSIFDYAGTIFALMGVSIPIFFFALLLIKQFGIDLRWFPISGMRTP--------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 A + N D + H +LP VLG +R TRSSMLEV+ +DYIRTA Sbjct: 172 --------AADFSFPHNMFDLLKHSVLPLTVLGLTQAGRFMRYTRSSMLEVIRQDYIRTA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVT++G + L +GA+L E +F WPG+GR +++ Sbjct: 224 RAKGLNEKVVIYKHALRNALIPVVTLLGASLPILFSGALLIEIVFVWPGMGRLQYNSVLH 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L + + ++ NL+ D+ Y ++PRIR+ Sbjct: 284 RDYPLMMGINLFLGVLTLMGNLVADISYAFIDPRIRYD 321 >UniRef50_Q0T6D1 Glutathione transport system permease protein gsiC n=145 Tax=Bacteria RepID=GSIC_SHIF8 Length = 306 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++++RL +IPT +++L F FVHM+PGDP ++AG + + +LGLD+ Sbjct: 1 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEA-DAQVIELVRQQLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ HYI + GD G+SM SR PV +E RF TL L + +M++A G+ G++ Sbjct: 60 PLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D ++ +A++G S P F GM LI + SV P G Sbjct: 120 AAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D+ H ILP++ LG AV+ R TR+S ++VL EDY+RTA Sbjct: 167 ------------------ADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ V++ H LRNAM+PVVT++GLQ G LL G+I+ E +F+WPGLGR L+D+++ Sbjct: 209 RAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEM 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +LL + IL+NL+VD+LY +NP IR+K Sbjct: 269 RDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306 >UniRef50_C8WR99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WR99_ALIAD Length = 320 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 189/339 (55%), Gaps = 21/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RR+ IP+ IGI+++TF +H++PG+PV I+ G+ +P+R A L LGL+K Sbjct: 1 MLSYIVRRILQAIPSLIGISIITFILLHIVPGNPVRILLGQH-YTPQRAAALAQSLGLNK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL ++W ++HG+LG S PV TL L + A IFA + +G + Sbjct: 60 PLYMQYLIWLWNILHGNLGYSYNYTEPVTYLIGHALPNTLSLVLIATIFAQLFAMLIGTV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +I DH L YSMP FW G++++M S+ + P G V+ Sbjct: 120 QAYFENTIADHIITVLNYFFYSMPSFWLGILMVMFFSIQLHWFPSGGVVNPQD------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + F D + H+ILPA L + LA R RSS+ E L DY+RTA Sbjct: 173 -------------PNPGFWDWLHHLILPAATLTLVTLAGYSRYMRSSVRETLLMDYVRTA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +V+ H LRN++LP +T+ GL L AGA+ E IF++PG+G +A+ Sbjct: 220 RAKGLRESQVLWRHVLRNSILPQITLFGLSFPALFAGALFIEEIFNYPGMGLLYWNAVGT 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYPV+ G + + + I+ NLL D+LY +V+PRI + Sbjct: 280 LDYPVLLGVTMFLGALTIIGNLLADILYSLVDPRISLES 318 >UniRef50_A0LI52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI52_SYNFM Length = 332 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 187/346 (54%), Gaps = 22/346 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI--------MAGERGISPERHAQL 52 M +IL+RL +IPT +GIT +TF + + PG+P + G+RGISPE Q Sbjct: 1 MKGYILKRLLQIIPTLLGITFITFLIIQLAPGNPATLKLQMSGQGQLGDRGISPEVIEQT 60 Query: 53 LAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 GLDKP+ +QYL ++ V D G S K VWE+ R TL+L + ++ Sbjct: 61 KKLYGLDKPLHEQYLLWVKRVFTLDFGTSYKDHRNVWEKIAERLPVTLQLNLISIFLVYL 120 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM 172 + IP GV +AV+ GS +DH YS+P FW ++LIM + Sbjct: 121 IAIPFGVYSAVRPGSFWDHALTLFFFFLYSLPSFWVAVLLIMFLGGGDFW---------- 170 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 D P I +D V H++LP L LA + R+TR++MLEV+ Sbjct: 171 ----DIFPAYNISSIGAEALSPLQWLLDRVWHLVLPVTCLTYGGLAYLSRLTRANMLEVI 226 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 EDY+RTARAKGL+ VI HA RNA+LP++T++ + ++ G+++ E+IFS PG+G+ Sbjct: 227 REDYVRTARAKGLSERVVIFKHAFRNALLPIITLLAFLLPSMFGGSVIIESIFSIPGMGQ 286 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +A+ RDYPV+ + A + ++ L+ DLLY ++PRI+ + Sbjct: 287 LGFEAVLGRDYPVIMAITTVSAMLTLIGLLISDLLYAAMDPRIKLE 332 >UniRef50_D1Y1A5 Probable D,D-dipeptide transport system permease protein DdpB n=2 Tax=Bacteria RepID=D1Y1A5_9BACT Length = 309 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 141/339 (41%), Positives = 202/339 (59%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ +RRL L++P G+ LL F +++ PGDP + GE E Q GLD Sbjct: 1 MLKYTIRRLILLVPVLAGVALLVFTLLYITPGDPARMALGEDA-PQEAVEQFRKNYGLDD 59 Query: 61 PMWQQYLHYI-WGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + Q+ Y ++HGD+G S ++ V EE + RF TL+L A++ A+G+P G+ Sbjct: 60 PFFVQFGRYCYKALLHGDIGDSYVTKSSVSEEILTRFPTTLKLAFWAVVLGVALGLPFGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A+++ SIFD ++ LAL G +MP FW G++LI+L SV N P SG + Sbjct: 120 ICAIRQYSIFDSVSMVLALIGVAMPNFWLGVLLILLFSVKLNWLPPSGFTTFAE------ 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 M +P L LAVI RMTRSSMLEV+ DY+RT Sbjct: 174 -------------------------MAMPVFTLSGGTLAVITRMTRSSMLEVIKSDYVRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG +I HAL NA++P++T++G+Q G LL+GAILTET+FS PG+GR ++++++ Sbjct: 209 ARAKGQRESVIIWRHALPNALIPILTIVGMQFGGLLSGAILTETVFSIPGVGRLMVESIK 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PVVQGGVL +A + +NL VDLLY V+PRI+ K Sbjct: 269 MRDFPVVQGGVLYIALVFCFINLAVDLLYAWVDPRIKAK 307 >UniRef50_Q28JR5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=Q28JR5_JANSC Length = 324 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 133/336 (39%), Positives = 203/336 (60%), Gaps = 13/336 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F++RRL I IG+TL++F + I GDP + E + E LG D+ Sbjct: 1 MWTFLVRRLLQSIIVMIGVTLISFISLQ-IGGDPTYLFVSENATTEE-IEAARIALGFDR 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL YIWG + GD G S+ R P + + AT+EL +++ A + +P+G+ Sbjct: 59 PLHIQYLSYIWGALQGDFGNSLSYRQPAMDIVLQAMPATIELTFFSLVIAIGLSVPLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ RG D + +A+ G S+P FW G+M+ + ++ P+SG + L + Sbjct: 119 AALHRGKPIDGGIMTIAMLGQSIPNFWMGIMMFLFFGLYLGWFPISGNEPFLEPLFEGEF 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F + + + HM+LPA+ +GT LA R+ RSSMLEVL +DY+RTA Sbjct: 179 SEAFTNLPS-----------TIHHMVLPAVAVGTYTLARNARLVRSSMLEVLQQDYVRTA 227 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ RV+I HA+RNA LPVVT+IGL+ G LL G ++ ET+FS+PG+GR + +A+ + Sbjct: 228 RSKGISERRVVINHAMRNAWLPVVTMIGLEFGFLLGGVVVVETVFSYPGIGRLVFNAINQ 287 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD PVVQ V+L+A + IL+NL+VDL+Y ++PR++ Sbjct: 288 RDIPVVQASVILLAAIFILLNLIVDLIYARLDPRVK 323 >UniRef50_D1Y6N0 Oligopeptide transport system permease protein AppB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6N0_9BACT Length = 320 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 135/341 (39%), Positives = 198/341 (58%), Gaps = 24/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG--ERGISPERHAQLLAELGL 58 M +I+RR+ +PT + +LL F+ +++ PGDPV ++ G + +S E+ + + GL Sbjct: 1 MWAYIIRRIFQTVPTLLISSLLIFSLLYVTPGDPVELILGTEDANVSEEQRKLVEEQWGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 DKP +Y+ +I G GDLG S + V+ R TL+L AM+ A V +P+G Sbjct: 61 DKPFLVRYIRFIKGAFVGDLGTSYATGEDVFSSVAKRMPNTLKLAGSAMVIALVVSLPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAA+K I D A LA G S+P FW+G++LI+ ++H P +++ Sbjct: 121 ILAALKHNGILDSVATALATIGVSLPRFWFGLVLIIFFALHLGWLPTMPETTNIA----- 175 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + +ILPA L A RM RSSML+VL +DY+R Sbjct: 176 -----------------DGVVPFLRSIILPASSLALSMAATQTRMIRSSMLDVLNQDYVR 218 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR+KGL VI HAL+NAM+PVVTVIG ++G+LL GA++TE+IFSWPG+GR I ++ Sbjct: 219 YARSKGLKEHAVIWGHALKNAMIPVVTVIGGEIGSLLGGAVITESIFSWPGVGRLTISSI 278 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RRDYP++QG L++ +LVNL+VD+LY NPRIR Sbjct: 279 ARRDYPMIQGATLMLCISYMLVNLVVDILYAWFNPRIRLDS 319 >UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein n=7 Tax=Halobacteriaceae RepID=Q18HF1_HALWD Length = 347 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 151/342 (44%), Positives = 211/342 (61%), Gaps = 10/342 (2%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+ RR+ L++P G+ L F+ + + PGDP I+ G+R S ++ AQ+ +ELGL+ P+ Sbjct: 5 RFLFRRVLLLVPVLFGVATLVFSILQLAPGDPARIIVGQRA-SAQQVAQVRSELGLNDPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMK--SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY+ ++ D G S K PV R TLEL + I +GIP+GV+ Sbjct: 64 WVQYIRFLIDAATFDFGQSYKIAQGEPVQNVLASRLPVTLELAIYGQITGILLGIPLGVI 123 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN- 179 +AVK+ S+ DH ALTG S+PIFW G +LI+L S + P SGR+ +FL + Sbjct: 124 SAVKQDSLTDHLTRVGALTGISVPIFWSGPLLILLFSTFLGILPTSGRIGSTIFLSEQWS 183 Query: 180 ------PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 PLTG + IDT + GE FI AV H++LP +VLG +A++ RM RSSMLEV+ Sbjct: 184 LFGMELPLTGMVTIDTLLLGEFDAFISAVRHLLLPVLVLGIYQMALLSRMMRSSMLEVVR 243 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 +DY+RTARAKG I+ H +NA++PVVTVIG+Q GTLL GA+LTET+F G+G Sbjct: 244 QDYMRTARAKGQGAKITILKHGFQNALIPVVTVIGIQFGTLLGGAVLTETVFGIGGIGTM 303 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 L+ A+ DYP+VQG VL A + VN VD+ Y ++PRI Sbjct: 304 LVSAIGASDYPLVQGTVLTFALLFTFVNFGVDITYSYLDPRI 345 >UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=4 Tax=cellular organisms RepID=B1L5E7_KORCO Length = 337 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 147/336 (43%), Positives = 216/336 (64%), Gaps = 3/336 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RRL L+I GI ++TF H+IP DP+ + G + SPE ++ E G DKP+ Sbjct: 5 TYIIRRLALMIFVLFGIIVITFVVSHVIPADPIGAILGPQA-SPELVEKIRREWGFDKPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 +Q+ YI+ V+ GDLG S+K+ PV E+ + F AT+EL A+I A A+GIP+G+++A Sbjct: 64 HEQFFDYIYKVVRGDLGRSIKTNKPVMEDLLYFFPATIELATAAIIVAIAIGIPLGIISA 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 VK+ DH + AL G SMP+FW G++L+ ++ + P GR+ + + +T Sbjct: 124 VKKDKWPDHISRIFALMGVSMPVFWLGLILLFVLYYKLGIFPGPGRLDPG--IPEPPRIT 181 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G + ID+ I G FI+A+ H+ LP+ VLG A I R+TR+++LEVL +D+I+ AR+ Sbjct: 182 GLLTIDSLITGNFEAFINALWHLALPSFVLGYYASASIARITRTALLEVLTQDFIKAARS 241 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL V+ HALRNA++P TVIG+ G+LL GAILTETIF+WPGLGR+ A D Sbjct: 242 KGLAERIVLFRHALRNALIPTTTVIGMAYGSLLEGAILTETIFAWPGLGRYSTGAFLSVD 301 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + V G LL+A + L NL+VD+LY ++PRIR+ Sbjct: 302 FMAVMGSTLLIAIVYSLANLIVDILYAFLDPRIRYA 337 >UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepID=A6TS90_ALKMQ Length = 309 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 151/339 (44%), Positives = 209/339 (61%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL +IP +G++L+ F ++ PGDP IM GE E A++ LGLD Sbjct: 1 MHKYILRRLLYLIPVILGVSLIVFTMMYFTPGDPARIMLGESAPDEE-VARMRESLGLDD 59 Query: 61 PMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P Q+ Y+ V+H D+G S ++ PV EE + RF ATL+L + A +GIP+G+ Sbjct: 60 PYVVQFGRYVKNAVVHQDIGRSYRTGRPVAEEVLTRFPATLKLAAAGVFVAVVIGIPIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A K+ S+FD+ A+ AL G SMP FW GMM I++ SV+ P SG Sbjct: 120 ISATKQYSLFDNVAMIFALMGVSMPNFWQGMMGILIFSVYLGWFPSSG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H+ILPA +GT A+I RMTRSSMLEV+ +DYIRT Sbjct: 168 -------------------FSTFRHLILPATTIGTSSAAIITRMTRSSMLEVVRQDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG VI HAL+NA++P++TVIGLQ G LL GA+LTE+IFS PG+G+ ++D++ Sbjct: 209 ARAKGQAESVVINQHALKNALIPIITVIGLQFGYLLGGAVLTESIFSIPGVGKLMVDSIL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PVVQGGVL +A +VNL+VD+LY V+PRI+ + Sbjct: 269 TRDFPVVQGGVLFIAVTFSMVNLVVDILYAYVDPRIKSQ 307 >UniRef50_B8E2R5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Dictyoglomus RepID=B8E2R5_DICTD Length = 309 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 147/338 (43%), Positives = 214/338 (63%), Gaps = 29/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I+RRL IP FIG+TL+TF + PGDP ++AG+R E A++ A GLDK Sbjct: 1 MLRYIIRRLLQAIPVFIGVTLITFILFFIAPGDPARLIAGQRA-DAETIARVRAMWGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ ++ D G S K+ IPV R QAT L A I A +G+ G++ Sbjct: 60 PLPVQYLLFLGRIVRLDFGRSFKTNIPVIVSIGERLQATAVLAFFAFIIAVFLGVTAGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ S+FD+TA+ +AL G S P++W G++L+++ + P+ G +S+ Sbjct: 120 SAVRQYSLFDYTAMVVALLGVSAPVYWVGIILLLIFGFNLGWLPLGGYISEY-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPAI LGT P A R++RSSMLEV+ ++YI TA Sbjct: 172 --------------------GIKAVILPAITLGTRPAAYFARLSRSSMLEVIRQEYITTA 211 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +VI HALRNA++PVVT G+ VG LL GA+LTETIF+WPG+GR ++ A+ Sbjct: 212 RAKGLPESKVIFKHALRNALIPVVTYAGMVVGDLLTGAVLTETIFAWPGIGRLVVQAILD 271 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QGGV+++A + IL NL+VDL Y +++PRIR++ Sbjct: 272 RDLPVLQGGVIVIALIYILANLIVDLSYALIDPRIRYE 309 >UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCD1_9FIRM Length = 306 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 136/338 (40%), Positives = 208/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + ++R+ VIP + I+ + F + ++PGDPV M G S E A AELGLDK Sbjct: 1 MLGYTIKRILQVIPVLLIISFICFMMIRLVPGDPVANMLGVNA-SKEAIAAQRAELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S+ +R PV +E R+ ATL+L + A +FA VGI GVL Sbjct: 60 PLLTQYGDFLVKALQGDLGKSITTRRPVIDEIAQRYPATLKLALGATVFAAVVGITFGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ + +L S P F+ +++++L S+H P G + + Sbjct: 120 SAVKQNKLTDNVIMVFSLLSVSTPSFFLALVMMLLFSIHLGWLPSMGLRTPL-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H +LP I LG + +I R TRSSMLEVL +DYIRT+ Sbjct: 172 -----------------------HYVLPIITLGMQSVGLIARTTRSSMLEVLRQDYIRTS 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+++ +++ HA +NA++PVVTV+GL+ G LLAG++L E +FS PG+GR+++D + + Sbjct: 209 RSRGISQAVIVMRHAFKNALIPVVTVVGLRFGGLLAGSMLVEAVFSVPGIGRFMVDGVLK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL++AT +LVNL VDL+Y +++PRI++ Sbjct: 269 RDYPVVQGTVLVLATTFVLVNLAVDLIYALIDPRIKYD 306 >UniRef50_A6TPC4 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Bacteria RepID=A6TPC4_ALKMQ Length = 315 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 204/344 (59%), Gaps = 37/344 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++ LRRL ++P IG+T + F+ ++ PGD + G+ + E+ + ++GL+ Sbjct: 1 MVKYTLRRLAYLLPVLIGVTFVVFSIMYFTPGDAAAMRLGQEA-TQEQIDSMRDQMGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY YI + GD G S +S PV E + RF T L V M A +G+ +GV+ Sbjct: 60 PFHIQYGRYIINAVQGDFGRSWRSNSPVISEILARFPNTFVLSVAGMSIAILIGVSLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN------LTPVSGRVSDMVF 174 +AVK+ SI D+ + AL G S+P FW+GM+ I+L SV WN L P SG Sbjct: 120 SAVKQYSISDNIGMFFALFGVSVPNFWFGMLTILLFSVFWNNQFGFSLFPSSG------- 172 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 F + ++LPA+ LGT A+I RMTRS+MLEVL + Sbjct: 173 -----------------------FDAGLRSLVLPALTLGTSSAAIITRMTRSAMLEVLSQ 209 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYIR RAKGL ++I HAL NA++P++TV GLQ G LL GA+ TET+FS+PG+GR + Sbjct: 210 DYIRFTRAKGLGERKIITRHALSNALIPIITVTGLQFGVLLGGAVFTETVFSFPGIGRLI 269 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +++++ RD P+VQG V+ +A + LVNL VDL+Y +V+PRI+ + Sbjct: 270 VESIRARDLPMVQGSVIFLAFVFSLVNLGVDLIYALVDPRIKAQ 313 >UniRef50_D1CAI4 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=D1CAI4_SPHTD Length = 308 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 140/339 (41%), Positives = 205/339 (60%), Gaps = 32/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML++I RL IP G+TL F V ++PGDPV IM G + +PE+ A + +LGLD Sbjct: 1 MLRYIAVRLISAIPVVFGVTLAVFFMVRLVPGDPVDIMFGNQARPTPEQRAAMRKQLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QY+ +I + GDLG S +S+ PV +E + R TL+L ++ A +G GV Sbjct: 61 LPIHKQYVKFISDALRGDLGRSFRSKRPVMQEILIRLPNTLKLTAASLAVAVVIGTVTGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA +GS D+ ++ A+ G S+P FW G+MLI+L SV PVSG + Sbjct: 121 LAATFKGSWIDNVSMVSAVLGVSIPGFWLGLMLILLFSVRLGWLPVSGTGT--------- 171 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H++LPA LG + A++ R+TR+SMLE L DY+RT Sbjct: 172 ----------------------WKHLVLPAFTLGLLSSAILARLTRASMLEALSGDYVRT 209 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V+I HALRNA++P+VT++GLQ+G LL+GA + E +F + G+G + ALQ Sbjct: 210 ARAKGLREWWVVIRHALRNALIPIVTMLGLQIGGLLSGAFIIEAVFGYSGIGLLAVGALQ 269 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++QG VL+V+ + + VNLLVD++Y ++PRI + Sbjct: 270 TRDFPLIQGIVLMVSLIYVGVNLLVDIIYAAIDPRISYS 308 >UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67T79_SYMTH Length = 306 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 135/336 (40%), Positives = 202/336 (60%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RRL IP +G++L+TF +H++PGDPV + E+ P ++ E+GLD+ Sbjct: 1 MLAYIVRRLWSGIPVLLGVSLITFILMHVVPGDPVTVAF-EKKADPATIERIRREMGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S +++ PV ATL+L A++ + +G+P+G+L Sbjct: 60 PLPVQYADFLLRALRGDLGRSFQTQQPVMNMIRSAMPATLKLTASAVLVSVVIGVPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ RG+ D+ A AL+ S P+FW M+ +L P+SG Sbjct: 120 SALNRGTAIDYMATVTALSFISAPVFWVAMVAQLLFGYRLGWLPISG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+ILPA+VLGT A I R TRSSML+V+ +DYIRTA Sbjct: 167 ------------------FDTLKHLILPALVLGTRYAASIARYTRSSMLDVVSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ HAL+NA++PV+TV+GL++G LL G+ILTE++F PGLG I L Sbjct: 209 RAKGLSGRVVVFKHALKNALIPVITVVGLEIGGLLTGSILTESVFGIPGLGLVTIRGLNA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+PV+Q VLL A + +++N+LVD+ Y +V+PRIR Sbjct: 269 LDFPVIQATVLLTAVIFVVMNILVDISYSLVDPRIR 304 >UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacteria RepID=B9KZQ4_THERP Length = 315 Score = 375 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 136/339 (40%), Positives = 202/339 (59%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L IP + + TF +HM PGDPV ++ G + E+ A+L ELGL+ Sbjct: 1 MTAYIVRRLLLAIPVMLLVATATFLLLHMTPGDPVAVLLGPDATT-EQIAELRRELGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY ++ G + GDLG S+ PV R T +L + A + A +G+ +G+L Sbjct: 60 PIYIQYGRWLAGAVRGDLGQSIFLNKPVTIAIFERLAPTAQLSILASLVAIVIGLSLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+ G+ D A+ +A+ G SMP FW G+ LI + +V + L P G Sbjct: 120 SAVRHGTALDLGAMLIAMIGISMPTFWLGLNLIFIFAVSFRLLPPQGYQPLH-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D ++ MILPAI LG A + R+TRS +LE L EDY+RTA Sbjct: 172 ---------------EGLWDNLSRMILPAITLGAGQGAFLARITRSVVLETLREDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ RV++ H LRN ++P+ TVIGL L+ GA++TE +F+ PG+GR LI A+ R Sbjct: 217 RAKGLSERRVLVGHVLRNGLIPITTVIGLTFAILMGGAVVTEQVFNIPGIGRLLIQAVLR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD+P++QG VL +A + +L+NLL+D+LY ++PRIR+ + Sbjct: 277 RDFPLIQGIVLFIAFVYVLINLLIDILYAFLDPRIRYAE 315 >UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH Length = 389 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 184/295 (62%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+L+RLGL+IPTF GITL+TF + MIPGDPV +M GER + P HA+ + LGLDK Sbjct: 1 MLSFVLKRLGLLIPTFFGITLITFGLIRMIPGDPVEVMMGERRVDPVMHAEAMHRLGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY Y+ + G+ G S+ +R VW+EFV F AT+EL AM+FA +G+ GVL Sbjct: 61 PLPAQYFDYVSSLAQGNFGESLVTRESVWKEFVTLFPATVELSAAAMLFAIVLGLLAGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRGSIFDH +GL+LTG+SMPIFWWG++LIM SV TPVSGR+ + D P Sbjct: 121 AAIKRGSIFDHGVMGLSLTGFSMPIFWWGLILIMFFSVSLGWTPVSGRID---LMYDIEP 177 Query: 181 LTGFMLIDTAIWG------EDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 TGFMLIDT G F DA+ H+ILPAIVLGTIPLAVI RMTRSSMLEVL E Sbjct: 178 QTGFMLIDTWRAEMLDPELNAGAFRDALMHLILPAIVLGTIPLAVIARMTRSSMLEVLRE 237 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPG 289 DYIRTARAKGL+ +RV+ VHALRNA++PV+TVIGLQVG LLAGA+LTETIFSWPG Sbjct: 238 DYIRTARAKGLSPLRVVFVHALRNALIPVLTVIGLQVGVLLAGAVLTETIFSWPG 292 >UniRef50_A8F6T0 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=A8F6T0_THELT Length = 328 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 127/343 (37%), Positives = 194/343 (56%), Gaps = 22/343 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI--MAGERGI--SPERHAQLLAEL 56 M +++ RL +IP F I+L+ F ++ +PGDP++ + R + P + A+L Sbjct: 1 MKRYLFFRLLELIPIFFLISLIIFVILNAMPGDPLLTSRLENPRALVRDPAKIAELRKYY 60 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 LD P+ +Y ++ + GDLG S + PV V R TL L + A + V P Sbjct: 61 HLDDPLIVRYGFWLTSFLKGDLGFSSMYKQPVLGIIVKRLPNTLTLTITAWVIGLIVAFP 120 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G+ +AVK+ S FD+ LA G S+P FW+ +M I++ SV P+SG Sbjct: 121 IGIYSAVKKYSFFDYFFTILAFVGISLPTFWFALMAIIVFSVVLGWFPISG--------- 171 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 + I G F+D + H+ LPA+VLG + +A VR R+S+LEVL +DY Sbjct: 172 ---------VQTYGITGSWNIFVDKLRHLTLPALVLGLVQVAYWVRYIRTSLLEVLDQDY 222 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTA +KG RVI+ HALRNAM+P++T+I L + GA++ ET+FSWPG+GR + + Sbjct: 223 IRTAYSKGAKEKRVILKHALRNAMIPIITIIALDIPYFFGGALIVETVFSWPGMGRLMYE 282 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 A+ DY + ++ +A + +L NLL D+LY VV+PRIR + Sbjct: 283 AILASDYNLAVNCLMFIAVITLLSNLLADILYAVVDPRIRLGE 325 >UniRef50_B3EH22 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Chlorobiaceae RepID=B3EH22_CHLL2 Length = 321 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 191/337 (56%), Gaps = 18/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +IL+RL L +P G+ LTF + + PGDP + G+SP Q+ A+ GL+ Sbjct: 1 MLTYILKRLLLSVPLIFGVLTLTFFIIRLAPGDPAAFFI-QPGVSPNVAEQIRAQYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ ++ V+ GD G S +++ PV+E T+ + ++ GI +G+ Sbjct: 60 PLPVQYVKWLGNVLQGDFGRSFSRAQQPVFEVIAEALPITVTIAALTLVANFTFGIIIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AV++ S D AL YSMP FW+ +M+I+L ++ P SG Sbjct: 120 ISAVRQNSFLDRFLTVTALFFYSMPEFWFALMMIILFALKLQWFPASG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 I +G G F+D + H++LP VL A I R R SMLEV+ +DYIRT Sbjct: 168 ----LNEIGAESFGPFGFFLDRIWHLVLPVTVLSINGSAGIARYVRGSMLEVIRQDYIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL VI HALRNA+LPV+T+IG + + +GA+ E IF++PG+GR ++A+ Sbjct: 224 ARAKGLPEKVVIFHHALRNALLPVITLIGSSLPFIFSGALFIEVIFAFPGMGRVTVEAIF 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++ + T+I+L NLL D+LY V +PRIR Sbjct: 284 ARDYPLIIANTFISGTLIVLGNLLADVLYAVADPRIR 320 >UniRef50_Q9V2D1 Binding protein-dependent transport system, inner membrane component n=1 Tax=Pyrococcus abyssi RepID=Q9V2D1_PYRAB Length = 310 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 124/333 (37%), Positives = 199/333 (59%), Gaps = 32/333 (9%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I++++ ++ +++ +F+ +H+IPGDP + GE + E+ A+ +LGLD+P++ Sbjct: 5 WIIKKILSLLIPIFIVSVFSFSILHLIPGDPARYLLGEFA-TEEQLAKFRHQLGLDRPLY 63 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY+ ++ V+ GD G S+ +PV E R TL+L V A I A G+ G+LAAV Sbjct: 64 IQYIDWMSKVLRGDFGTSLVQGVPVSELIAGRLSYTLKLTVTAWIIAWVFGLVFGMLAAV 123 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + ++FD+ + LA+ SMP FW G++LI++ V + P+SG Sbjct: 124 YKHTLFDYIVMTLAVFFMSMPYFWLGILLILIFGVKLGILPISGPGD------------- 170 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 H+ILP++ LG +AVI R+TR++ML+VL +DYI TARAK Sbjct: 171 ------------------WRHLILPSLTLGLPQVAVIARLTRANMLDVLEKDYIMTARAK 212 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL V+ HALRNA++P+VT + LQ+ L GA++TET+F WPG+G L+ A+ +RDY Sbjct: 213 GLPERMVVYKHALRNALIPLVTYMFLQIPWLFGGAVVTETVFGWPGMGNLLVMAIFQRDY 272 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 PVVQ VL++ + ++ N L D+ Y +++PR+R Sbjct: 273 PVVQAIVLIIGVLTVIANFLADITYTIIDPRVR 305 >UniRef50_D1B7J8 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=D1B7J8_THEAS Length = 308 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 217/338 (64%), Gaps = 30/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q++LR+L + IP G+ + F + ++PGDP IM G+RG PE A++ A+LGLDK Sbjct: 1 MFQYVLRKLLVSIPVVWGVVTVIFILMAVVPGDPARIMMGQRG-DPETLARIRADLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GDLG S ++ PV + RF T+ L + ++ AT VG+ G++ Sbjct: 60 PLTVQYVDFLSKLVRGDLGKSYRTNEPVSKAIGERFGVTMRLAIWCIVLATIVGVAAGIM 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ SIFD++A+ +A+ G S P+FW+ ++L+++ + + P G Sbjct: 120 SAVKQYSIFDYSAMFIAIAGVSAPVFWFSLLLLLVFAYGLHWVPGVGYEDG--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +M+LP I LG P A+I R+TRS MLEVL DYIRTA Sbjct: 171 --------------------SFRYMVLPIIALGLRPAAIIARLTRSCMLEVLSMDYIRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V++ HAL+NAM+PVVT++G ++ LL+GA+LTET+F+ PG+GR ++AL Sbjct: 211 RAKGLSERAVVLKHALKNAMIPVVTIVGAEMSGLLSGAVLTETVFALPGVGRLAVEALVA 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P+++G V+++A + ++ NLLVDL YG+ +PRIR++ Sbjct: 271 RDFPMIRGTVIVIALIFLVANLLVDLSYGLFDPRIRYE 308 >UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUX1_9CLOT Length = 315 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 195/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ + +RRL IPT I + ++ F + +PG+P + M + + E A + A++GLD+ Sbjct: 1 MINYTIRRLLSAIPTLIIVAVMVFFLIRCVPGNPALTMLSDDA-TVEEIAAMEAKMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ ++ + GD G S+ P + R ++T L + AM F+ +G+P+G+ Sbjct: 60 PVPVQFAKWVGNAVRGDFGSSIYYDEPAMSVVMSRLESTWMLVIMAMFFSILIGVPLGIT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D + L++ G SMP FW + L++L ++ + P G Sbjct: 120 AAVHRNGPLDKLCMVLSMIGISMPGFWLALNLVILFAIKVPIFPAVGYA----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +G + ++ +++LPAI LG A + R+TRSSML+VL DYIRTA Sbjct: 169 -----------YISEGGLVKSMRYLLLPAIALGLQRSASLARVTRSSMLDVLNSDYIRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL V+ VHAL+NAM ++T +G+ + LL GAI+ E +F+ PGLGR D++ R Sbjct: 218 RSKGLRERAVVYVHALKNAMNQIITQLGISIAHLLGGAIVMENVFNIPGLGRLAFDSIVR 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +L VA + ++VNL+VDLLY +PRI +K Sbjct: 278 RDYPVIQAHILYVAFIYVIVNLIVDLLYKFFDPRIEYK 315 >UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepID=A4IPU6_GEOTN Length = 316 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 203/339 (59%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+ R+ +IP + + ++ F +H+ PGDP +M G + +PE QL +LGL+ Sbjct: 1 MKAYIVTRILSLIPVLLVVAIVAFFLIHLTPGDPAAVMLGSQA-TPEEVEQLREQLGLNL 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++Q+ ++ +G++ GD G S+ PV F+ TL L V A + + IP+G+ Sbjct: 60 PLYEQFANWFFGLLQGDFGWSIYYNKPVLTVFLEHLGPTLSLAVLAQAISMVLAIPMGIS 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG+ D + L + G ++P F G+ L+ L ++ L PV+G Sbjct: 120 AARKRGTKIDQIFMALVMLGMAIPSFLMGLFLMQLFALKLKLFPVAGYEPLS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + MILPA LG I A+I RMTRSSML+VL ++I+TA Sbjct: 172 ---------------SGLWNHLKFMILPATALGIIQTAIIARMTRSSMLDVLSANFIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG+ ++ HALRNA +P++TV+G + GTL+AGA++TET+F+ PG+G+ +I A+++ Sbjct: 217 YAKGVKEKVIVYKHALRNAAIPILTVLGQEFGTLIAGAVVTETVFNLPGIGQLVIHAIEK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+QG +LL A +LVNL+VDLLYG+V+PR+R + Sbjct: 277 RDYAVIQGTILLAALSYLLVNLIVDLLYGIVDPRVRFGR 315 >UniRef50_A9WKA7 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Chloroflexi RepID=A9WKA7_CHLAA Length = 323 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 125/338 (36%), Positives = 197/338 (58%), Gaps = 15/338 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++LRRL + T ++L+ F + + PG + + A + ++ A++ A LGLD Sbjct: 1 MTTYLLRRLLQAVLTLFVVSLILFGLISVTPGGFMTVYAEKSDMTAADLARIRANLGLDD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ ++ GD G S+ S+ PV EE R TL L +I V IP+G+L Sbjct: 61 PVPIRYVKWLGNLLKGDWGRSLTSKRPVLEEIGSRLPNTLLLMSLMLICTLLVAIPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ S D+ +A G S+P+FW+G++LI++ SV P Sbjct: 121 SAIRQYSWLDNVLTTIAFAGQSLPVFWFGLLLIIVFSVLLR----------GPDGKPLLP 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +G + GE + D + H+ILP +L + A +R RS+ML+V+ EDYIRTA Sbjct: 171 GSGMYTL-----GEPFSLWDRIRHLILPVTMLTFVSAAEYMRYMRSAMLDVIHEDYIRTA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P+VT++ L + +L AGA+ TETIF+WPG+GR A + Sbjct: 226 RAKGIQEWVVIYKHALRNAIIPLVTLLSLDLPSLFAGALFTETIFAWPGIGRLYFTAALK 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYP+V + + + +IIL NLLVDL+Y +++PRIR Sbjct: 286 NDYPLVMAILTIYSALIILSNLLVDLIYAMLDPRIRLS 323 >UniRef50_UPI0001C354AE putative ABC-transporter permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C354AE Length = 328 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 192/338 (56%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL+RLG+ + +++++F VHM+PGDP ++ G S + A + LD+ Sbjct: 13 MGRYILKRLGISVAVIFLVSVISFTLVHMLPGDPAVLALGSEA-SEQDIATFREKYYLDR 71 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY +I + GDLG S+ PV R T+ +G+ A+I ++ +GI G++ Sbjct: 72 PIVEQYFIWITDTLRGDLGDSITYSRPVLTCLAERLPRTISIGLPALILSSILGILCGII 131 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++RG D+ ++ G P FW G++ I + + P+SG VS Sbjct: 132 SAIRRGKFIDNLITFVSTIGLGAPQFWLGIVGIYIFGMKLGWLPLSGYVSPG-------- 183 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 NF + + ++P ++L LA + R TRS+MLEV+ +DYIRTA Sbjct: 184 ---------------ENFGQYIYYGVMPILILSFSLLASVARQTRSNMLEVVNQDYIRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL VI HAL+NA++PV+T IGLQV ++ G+++ E +F+ G+G ++ A+ Sbjct: 229 RANGLAEKSVIYKHALKNALIPVITTIGLQVRVVVGGSLMVEQVFNIAGIGTLIVSAING 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY VVQG V +++ +LVN L+DLLYG V+PRIR Sbjct: 289 RDYMVVQGCVFVISVFTVLVNFLIDLLYGFVDPRIRKS 326 >UniRef50_C0ZDH7 ABC transporter permease protein n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDH7_BREBN Length = 312 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 131/335 (39%), Positives = 199/335 (59%), Gaps = 32/335 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q+ L R+ + +GI++ +FA VH IPGDPV IM GE+ + + QL ++GL++ Sbjct: 1 MKQYFLNRMLSGVIVLLGISIFSFALVHFIPGDPVRIMLGEKA-TKAQVEQLREQMGLNQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL Y+ V+ GD G S+++ PV E + RF AT++L + A +G+ +G++ Sbjct: 60 PLPHQYLTYMEKVIQGDFGNSLQTERPVIVEIMERFPATVKLAFAGIGIAVVIGLTMGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + + D + A G S+P FW G+++IM SV P++G Sbjct: 120 AAKYKNTFLDFMLMAAASIGLSLPSFWLGLLVIMFFSVQLGWFPIAG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++LPA LG + A+I R+TRS M+EVL DYIRTA Sbjct: 167 ------------------GTGWKDLVLPACTLGVLSSAMISRLTRSGMVEVLSHDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL ++ HAL N M+PVVTV+GLQ+ TLL GA++ E +F+WPG+G I A+ Sbjct: 209 RAKGLRESIILFRHALCNVMIPVVTVVGLQIATLLGGAVIIEQVFNWPGIGTLAIRAISA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD+P++QG VLL+ + ++VN++VDLLYG+++PR+ Sbjct: 269 RDFPMIQGIVLLMGFVYVVVNMMVDLLYGLIDPRV 303 >UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteria RepID=C0ZCW7_BREBN Length = 311 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 133/336 (39%), Positives = 193/336 (57%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F++RRL + + ITL+ F V M GDPV IM + E +L LGLD+ Sbjct: 1 MAAFLIRRLLHSVFVVLAITLVIFVLVRMT-GDPVSIMFQAGEPTKEAITELRKNLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + G+ G S ++ V + + ATL L M A + IPVG++ Sbjct: 60 PVYVQFGLYLKDMFTGNFGTSFRTGESVIDMMNEKMGATLLLAFGGMFVALLIAIPVGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV RGS+ D +L G S P FW G+MLI++ +V P SG Sbjct: 120 SAVYRGSVADFFGRIFSLLGISFPNFWLGIMLIIIFAVKLGWFPASGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + +++LP++ LG I ++ R+ RSSMLEV+ + YI TA Sbjct: 168 -------------------EGLEYLVLPSVALGLILSGILARLVRSSMLEVMNQQYINTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG+ VII H LRNA++P VT IGLQ GTLL G ++ E +FSWPG+GR LIDA+ + Sbjct: 209 RSKGIKEWLVIIKHGLRNALIPTVTFIGLQFGTLLGGTVIIEQVFSWPGIGRMLIDAISQ 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+PV+QG V++++ ++I VNLLVDL YG ++PRIR Sbjct: 269 RDFPVIQGSVIILSFLMIFVNLLVDLSYGFIDPRIR 304 >UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncultured archaeon RepID=D1JCG7_9ARCH Length = 320 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 135/340 (39%), Positives = 213/340 (62%), Gaps = 30/340 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGL 58 ML +I++RL L+IP +TL++F+ + +IPGDP + G P+ ++GL Sbjct: 6 MLNYIIKRLILLIPILFLVTLISFSLLFIIPGDPAETILTGPGGGADPKAVEAFRIKMGL 65 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 DKP++ QY ++ V+HG+LG S +S+ PV + +PRF ATL+L + ++I + + IP+G Sbjct: 66 DKPVYIQYFTWLESVLHGNLGYSYQSKRPVIDTILPRFHATLKLAIVSLIISLLISIPLG 125 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A+K+ S D+ ++ AL G SMP FW G++LI+L ++ PV+G Sbjct: 126 IISAIKQYSAIDNVSMVGALLGVSMPNFWQGLLLILLFAITLGWLPVAGYGDHGD----- 180 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + H+ILPAI LGT A+ R+ RS+MLE + +DYI+ Sbjct: 181 -----------------------LEHIILPAITLGTSSAAITTRLMRSTMLETINQDYIQ 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 ARAKGL+ VI HAL+NA++PVVT+IGL LL G+++ ETIF+WPG+G +++++ Sbjct: 218 AARAKGLSERVVIGKHALKNALIPVVTMIGLNFAYLLDGSVVVETIFAWPGIGLLMVESI 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QG +L VA + I VNL+VD+LY ++PRIR++ Sbjct: 278 YMRDYPMIQGCILFVAIIFIFVNLMVDILYTYLDPRIRYE 317 >UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3H5_DEIDV Length = 317 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 132/339 (38%), Positives = 192/339 (56%), Gaps = 23/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M +++RRL IP + IT + F + PGDP+ IS ++ + ELGLD Sbjct: 1 MGTYVVRRLLTTIPLLLVITAIIFTMLQFTPGDPMDAYIPPDQVISVQQREIIRTELGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P QYL ++ GDLG +K+ PV E R TL L M A+G+ GV Sbjct: 61 QPKPVQYLRWLGKAAQGDLGYRIKNGEPVTSEIARRLPPTLMLMGLGMTLGVALGVFFGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAAVKR + D+ LA G S P F G++ + + ++ P G + Sbjct: 121 LAAVKRYTALDNGLTFLAFLGISTPAFLAGLIGMYVFALKLQWFPAGGYQTPG------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 DG+ +D ++H+ILPA +L +AV++R TRSS+L+V+ +DY+RT Sbjct: 174 ---------------DGSVLDTLSHLILPASILSVTYIAVLMRYTRSSVLDVVFQDYVRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKG+ RVI H LRNA++PVVTVIG V L+ GA+ E+IFSWPG G+ +DA+ Sbjct: 219 ASAKGVPHTRVISKHVLRNALIPVVTVIGANVANLIGGAVFLESIFSWPGTGQLYLDAID 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L++AT+I+L NL+ D+LYG ++PRIR+ Sbjct: 279 SRDYPMIMGTTLVLATVILLANLITDVLYGAIDPRIRYS 317 >UniRef50_D2RRT8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RRT8_9EURY Length = 333 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 193/338 (57%), Gaps = 10/338 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++ + R+ IP IGI+++TF ++ PGDPV +M + S E + GLD+P Sbjct: 4 LKYTIHRVLQAIPVLIGISVITFLLANLGPGDPVSLMLQGQEHSEELVRSIEQRYGLDRP 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + ++YL Y+ G++ GDLG S+ + PV + R TL L + A FA IP+GV+A Sbjct: 64 LHERYLTYMAGLVQGDLGRSIHYQRPVAGLMLDRLGPTLLLVLSAYAFALVTAIPLGVIA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +R DH + +AL G S P FW G++LI++ +V P SG V P Sbjct: 124 ADRRNEPTDHVSRIVALVGVSTPSFWIGIVLILVFAVKLGWLPSSGLVYPW------RPP 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + ID G + ++ H++LP I LGT+ +A I+R+ R+ M+E L +Y+R AR Sbjct: 178 SAYRWID----GHLELYYQSLRHLLLPMIALGTLQMATIMRVERTQMIESLQGEYVRLAR 233 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G+ V+ HA + A LP++T++GL + T + GA+L ET+F G+GR IDA+Q Sbjct: 234 AYGVPERTVLRKHAFQPAQLPIITIVGLNLSTAIGGAVLVETVFDINGMGRLFIDAIQSN 293 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DY +V G + + + ++ ++ D+ Y ++PR+ + + Sbjct: 294 DYQLVMGITMTLGALFVIGVIITDISYAYIDPRVTYGE 331 >UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n=74 Tax=Bacteria RepID=C1EU78_BACC3 Length = 334 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 180/336 (53%), Gaps = 20/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RRL +IPT G +++ F ++PGD + I+PER A+L GL+KP+ Sbjct: 19 TYIVRRLLQMIPTLFGTSIIIFFLFALLPGDYID---SNPKITPERAAELRELYGLNKPI 75 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 ++Y H++ + GD G S++ + PV + + V A+ F + + +GV +A Sbjct: 76 VERYFHWLGNALQGDFGFSLQYQEPVTSLLNKFIWNSFSVAVIALFFIWLIALIIGVFSA 135 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ S+FD S P F+ G+ LI + +V + L P+ G + Sbjct: 136 TKQHSLFDKLVTIGVFAAMSFPSFFIGLFLIKVFAVDFKLLPIGGMIDVGSNSTG----- 190 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 I+ HMILP +L + + + R R+SMLEV+ +DYIRTARA Sbjct: 191 ------------FAYVIEVAKHMILPVFILTLLGVGSLTRYFRTSMLEVVRQDYIRTARA 238 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RD Sbjct: 239 KGLKEKTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGNIQLEALNFRD 298 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Y V+ + ++ + I+ N D++Y VV+PRIR K Sbjct: 299 YTVLMAFTMFLSCLTIVSNFFADIVYAVVDPRIRLK 334 >UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8I3_9FIRM Length = 327 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 120/340 (35%), Positives = 195/340 (57%), Gaps = 15/340 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE-RGISPERHAQLLAELGLD 59 M+++I +RL +IP I+++ F V +PGDPV G + + + E GLD Sbjct: 1 MVKYIFKRLINLIPVVFIISVVIFGTVKAMPGDPVNAYLGAGSRATEAQKDSIRREWGLD 60 Query: 60 KPMWQQYLHYIWGVMH-GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ +QY+ ++ ++ GDLG S K + PV + T L V A+I A+ IP+G Sbjct: 61 RPLPEQYVTWVKNMVTKGDLGQSTKFKQPVADIIGEYVWNTFLLNVVALIIGIALSIPIG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AVK+ S FD+ +L G S+P F++ ++L+ +++ PVSG + L Sbjct: 121 IRQAVKKFSKFDNFWTVFSLLGVSVPTFFFALLLVFYIAIPTGALPVSGMRDASMALIGY 180 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + D HMILP VL A R RS+M++V+ +DY+R Sbjct: 181 DNI-------------FQEIADVAVHMILPVTVLAFSNFATFSRYVRSAMIDVINQDYVR 227 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL VI HA +NAM+P+VT++GL + +L +GA++ E++F+WPGLG+ L+DA+ Sbjct: 228 TARAKGLKEKVVIYRHAFKNAMIPLVTLLGLYIPSLFSGAMILESVFAWPGLGKILVDAI 287 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D ++Q +L A +++L NLL D+LY VV+PR++ + Sbjct: 288 TNQDQAIMQACLLFSAILMVLGNLLSDVLYSVVDPRVKVE 327 >UniRef50_D1C9Y6 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9Y6_SPHTD Length = 314 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 139/338 (41%), Positives = 202/338 (59%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I+RRL L IP + + + TF +HM PGDPV ++ G + E+ ++ LGL+ Sbjct: 1 MTRYIIRRLLLAIPVMLLVAVTTFLLLHMTPGDPVSVLLGPDA-TVEQIEEMREALGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q L++ + GDLG S+ PV E R Q TL L + A + A VG+P GV+ Sbjct: 60 PVHIQLLNWFRDLARGDLGESIFLGKPVTEAIAERAQPTLLLTLLASLVAICVGLPFGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+RGS D A+ A+ G SMP FW G+ LI + V PV G Sbjct: 120 SAVRRGSTIDVGAMLAAMVGISMPTFWLGLNLIFIFGVKLRWLPVQGYQPLS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ ++I+PA+ LG A++ RMTRS MLEVL EDY+RTA Sbjct: 172 ---------------EGLWTSLRYLIMPALTLGAAQGALLARMTRSMMLEVLHEDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ RVI+ HALRNA +P+VTVIGL L++GA++TE +F PG G+ LI A+ R Sbjct: 217 RAKGVSERRVILHHALRNAFIPLVTVIGLTFAVLISGAVVTEQVFGIPGAGQLLIRAVNR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++QG VL+VA + +++NL+VDL+Y ++PRI + Sbjct: 277 RDFPLIQGIVLIVALLYVIINLIVDLIYVFLDPRIHYS 314 >UniRef50_C8W4W6 Binding-protein-dependent transport systems inner membrane component n=3 Tax=cellular organisms RepID=C8W4W6_DESAS Length = 316 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 136/341 (39%), Positives = 203/341 (59%), Gaps = 33/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISP--ERHAQLLAELGL 58 M+ ++L+RL +IP G++++TFA +++ PGDP I+ G+ P E + E GL Sbjct: 1 MILYLLKRLFYLIPVMFGVSIITFALINLAPGDPAEILLRSSGVEPTLEAVEAMREEFGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + ++ QY H++ V+ DLG S ++ PV E + RF ATLEL + A+ F + +P G Sbjct: 61 NNSVYMQYFHWLVKVLQLDLGNSFRTGQPVALEVLSRFPATLELTLAALFFMLLLAVPSG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AA+ + + DH + +AL G SMP FW G++LI +++V +L PV GR Sbjct: 121 ICAALYKNAWIDHFSRLVALFGASMPAFWLGLLLIYILAVKLHLFPVMGRG--------- 171 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +H++LP+ LG A R+ RSSML+VLG+D+I+ Sbjct: 172 ----------------------GWSHLVLPSATLGFGLAATYTRLLRSSMLDVLGQDFIK 209 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 ARAKGL +I HA+RNA+LPVVTV G+ G LL G + ETIF+WPG+GR +D++ Sbjct: 210 VARAKGLQEKLIISRHAMRNALLPVVTVFGMSFGHLLGGTAIVETIFAWPGVGRLCVDSI 269 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPV+Q VLL+A + +LVNL+VD+ Y ++PRIR K Sbjct: 270 FNRDYPVIQAYVLLMALVFVLVNLIVDISYVFLDPRIRLGK 310 >UniRef50_A1WQT8 Binding-protein-dependent transport systems inner membrane component n=13 Tax=Proteobacteria RepID=A1WQT8_VEREI Length = 338 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 137/337 (40%), Positives = 195/337 (57%), Gaps = 18/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML+ RL + + +L F VH PGDPV +AG G +SPE AQL + GLD Sbjct: 17 MLRHTAARLLQAAGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRQQYGLD 76 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ Q Y+ V+ GDLG S PV + R ATL L + A+ A VG +GV Sbjct: 77 QPLPVQLWVYLGKVVQGDLGHSYFFNQPVAQMIAARVPATLLLMLSAVSLAFGVGTALGV 136 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A K L+L G++ P+FW G+ML++L++ + PV+G S Sbjct: 137 LSARKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLASVLPILPVAGMRSIDASG---- 192 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G G+ +D H++LP + L + LA R+ RS+ML+VLG D+IRT Sbjct: 193 -------------GGIGDVLDVAHHLVLPTLTLSLVYLAQYSRLARSAMLDVLGADFIRT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V+ HALRNA+LPVVTV+GLQ G +LAGAIL ET+F+WPGLGR +++ Sbjct: 240 ARAKGLAERVVLYRHALRNALLPVVTVLGLQFGNMLAGAILVETVFNWPGLGRLAFESVL 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RRDYP + G +L + +++ +N + DL Y +++PRI+ Sbjct: 300 RRDYPTILGVLLFSSIVVVAMNQITDLCYRLIDPRIK 336 >UniRef50_C9M8R7 Glutathione ABC transporter, permease protein GsiC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8R7_9BACT Length = 307 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 137/336 (40%), Positives = 202/336 (60%), Gaps = 33/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I+RR+ L+IP + + + F ++ PGDP I GE ++P+ A AE GLDK Sbjct: 1 MVKYIVRRILLLIPIVLSVMFILFTILYFTPGDPARIALGEE-VTPDAIAAFRAEHGLDK 59 Query: 61 PMWQQYLHYI-WGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + Q+ +Y+ V GDLG S + PV E R T++L A++F+T VGIP+G+ Sbjct: 60 PFFVQFGNYVYRAVFKGDLGYSYAMQSPVSMEIGHRVPVTMKLAFWAVVFSTVVGIPLGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A+++ SI D + L G SMP FW G+++I+ SVH P G Sbjct: 120 ICAIRQYSILDSITTLITLLGVSMPTFWTGLLMILAFSVHLGWFPSMG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+V+ M+LP L LA+I RMTRSSMLEV+ DY+RT Sbjct: 168 -------------------FDSVSAMVLPVFTLSGSSLALIARMTRSSMLEVIRSDYVRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG T +VI HAL NA++P++T++ +Q GTLL G+I+TE +FS G+GR +I+A++ Sbjct: 209 ARAKGQTERKVIYRHALPNALIPIMTIVSMQFGTLLGGSIVTEAVFSISGIGRLMIEAIK 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYP++QGGVL ++ L+NL VD++Y V+PRI Sbjct: 269 MRDYPIIQGGVLFISIAFCLINLFVDVMYAFVDPRI 304 >UniRef50_A6M0G0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M0G0_CLOB8 Length = 323 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 199/336 (59%), Gaps = 18/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +++ RRL IP IGI+++ F V + PGDP M + +S E ++L +LG + P+ Sbjct: 6 KYVFRRLIQTIPVLIGISIIVFMLVKLQPGDPFSSMM-DPNLSQEMKEKMLEQLGYNDPI 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ + G+LG S++ + PV R T+ L +C+MI + + IP GV++A Sbjct: 65 LIQYFKWLMQALQGNLGYSIQFKQPVLNVIGSRLGNTVILSICSMILSILIAIPCGVISA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ + D+ A G S+P F++GM+LI + SV+ P+SG V+ V L + Sbjct: 125 TKQFTKTDYIVTVFAFIGLSIPSFFFGMILIKVFSVNLGWLPISGMVTTGVNLTGLPFV- 183 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ID HM+LP IVL + A ++R TRS M+E+L DYIRTAR+ Sbjct: 184 ----------------IDVAKHMLLPMIVLALMNTASLMRYTRSDMIEILKTDYIRTARS 227 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG+ + VI HAL+N +L ++TV+ +Q+ +LL+GA+LTETIF WPG+GR +A+ RD Sbjct: 228 KGVRKRNVIYQHALKNELLTLITVVTMQIPSLLSGALLTETIFVWPGIGRLNYNAVISRD 287 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP++ G V++VA + + NLL D+LY VV+ RI Sbjct: 288 YPLIMGIVMMVAIISLFTNLLADILYAVVDKRIEFD 323 >UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ98_9RHOB Length = 335 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 139/338 (41%), Positives = 211/338 (62%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML FILRR+ L+IP IG+T++ FA ++PGDPV + AG + L E GLD+ Sbjct: 1 MLYFILRRILLLIPVVIGLTVIMFAIARLLPGDPVSLAAGPNA-TQSEIDALAREFGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY Y+ G++HGDLG S+ +R PV + ATLEL + AM+ A +GIP+G+ Sbjct: 60 PIWTQYFDYLSGLLHGDLGTSLLTRRPVAADIAAYLPATLELVIAAMLIAVCIGIPLGLA 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV R D+ + +A+ SMP F+ G++L + ++ P+ GR+ +V + Sbjct: 120 TAVWRNRWPDYLSQVVAIGAISMPRFFLGLLLQLCFAMWLMWLPLGGRLPIIVIPPPT-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF+ ID+ + G+ F+ A+ H+ +PAI + PLA I+RM R+S +EV+ +DY+ TA Sbjct: 178 VTGFLTIDSLLAGDMHTFVTALRHLAMPAIAMSLSPLATIMRMMRASTIEVMSQDYVTTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL R ++I+ + RNA+ +TVIGL G LL G +L ET+F WPGLG + A+ Sbjct: 238 RALGLPRAKIILKYIARNAVSATLTVIGLYFGWLLGGTVLVETVFDWPGLGLYATKAIIS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D V G L++ M + NL++DLLYGV+NP++R+ Sbjct: 298 QDMMPVIGVALVIGLMFVAANLVIDLLYGVINPKVRYS 335 >UniRef50_D2ASJ6 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Actinobacteria (class) RepID=D2ASJ6_STRRD Length = 364 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 211/338 (62%), Gaps = 3/338 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 ++F+ RR+ + +GITL+TF +++PGDPV G+R + P AQ AE GLDK Sbjct: 29 IRFLARRVLTALLLAVGITLVTFVLTNLVPGDPVSANLGQRALGDPAIVAQWRAEHGLDK 88 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQYL ++ GV+ GDLG S +S PV ++ ATLEL A++ + G+ GV+ Sbjct: 89 PLPQQYLMHLQGVVQGDLGTSQQSHRPVMDDLAESVPATLELAGAAILISLVAGVAFGVV 148 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++R + DH L+L G S+P FW +M + +TP SGR+ + Sbjct: 149 AALRRDRLSDHLLRVLSLVGISVPTFWLALMAFYVFFYRLQVTPGSGRIDPT--MSPPPQ 206 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ID+A+ G+ F AV H+I PA+VL + ++ R TRS++LEVLG+DY+R A Sbjct: 207 VTGLYTIDSALAGQWDVFASAVGHLITPALVLALYTIGLLTRFTRSAVLEVLGQDYVRAA 266 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL ++ + LR+A++P++TV GL G+LL+G +L E IF+WPG+G++ + Sbjct: 267 RAKGLPGRVILFRYVLRSALVPIITVAGLAFGSLLSGTVLVEAIFAWPGVGQYAYKSATT 326 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P V G L+V + +++NL+VD+LYGV++PR+R + Sbjct: 327 LDLPAVMGVGLVVGGVYLVINLIVDVLYGVIDPRVRLQ 364 >UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Bacteria RepID=Q5WKK0_BACSK Length = 321 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 145/335 (43%), Positives = 201/335 (60%), Gaps = 24/335 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+ +RL +IPT ++L+ F ++PGDP +M G + S E L ELGLD+ Sbjct: 1 MIHFVGKRLLDLIPTLFVVSLVIFIITRLLPGDPASVMLGPQA-SVEDVEALRGELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QQ LHY ++ D G S PV + RF TL L V A+ A VG+P G++ Sbjct: 60 PFFQQLLHYFKDLLQLDFGTSAYYNEPVLSLIMDRFPNTLLLAVSALAIALLVGVPAGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KR S+ D+ +L G SMP+FW G+M ++ SV P +G S Sbjct: 120 AAAKRNSVIDYLVTFGSLVGVSMPVFWLGVMFVLFFSVQLGWLPATGMGSL--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D D +++LP++ L TIP+A R+TRSSMLEV +DYI+TA Sbjct: 171 --------------DNGLWDFFKYLLLPSVTLATIPMAEFARITRSSMLEVGAQDYIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HA +NA+ P++TV G+QV LL GA+LTETI++WPG+GR ++DA+ + Sbjct: 217 RAKGLKEFWVISKHAFKNALTPLLTVTGMQVSMLLGGAVLTETIYAWPGMGRMIVDAIDK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD+ VVQG VL +A + +LVNL+VDLLY VVNPR+ Sbjct: 277 RDFIVVQGSVLFIALIFVLVNLVVDLLYKVVNPRV 311 >UniRef50_C4WPT9 Dipeptide transport system permease protein dppB n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPT9_9RHIZ Length = 343 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 135/338 (39%), Positives = 207/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+++R+ + IP IG+T+L F +++IPGDP+ ++ E S E ++ A++ LD Sbjct: 32 MLTFLIKRIAVSIPVLIGVTVLLFIMMNIIPGDPIALLMKEHA-SAEVIERVRAQMHLDD 90 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y +++ + GDLG+S+K V + F TL L CA + + +GIPVG+L Sbjct: 91 PLITRYFRFLFAAVQGDLGVSIKLNRDVTTLILQAFPNTLYLAACAALVSWMIGIPVGIL 150 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVKR S DH +G +L G SMP+FW ++L + ++ PVSG Sbjct: 151 SAVKRDSALDHFFMGFSLLGVSMPVFWSALLLQYIFAMQLKWLPVSGFY----------- 199 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ILPAIVLG VI R+TRSS+LEV+ DY+RTA Sbjct: 200 --------------------GFKYVILPAIVLGWSSAGVIARLTRSSLLEVMRNDYVRTA 239 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL + VI+ HA++NA++PVVT++ +QV LL+GA++TE IF PG+GR ++A+Q Sbjct: 240 RAKGLREIFVILRHAVKNALIPVVTIMAIQVAGLLSGAVITEAIFGIPGIGRISVNAIQA 299 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG VL ++++ NL+ D+LY V++PRIRH+ Sbjct: 300 RDMPLLQGSVLFATVLVLIGNLVADILYSVLDPRIRHQ 337 >UniRef50_D1C9E9 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9E9_SPHTD Length = 336 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 142/332 (42%), Positives = 213/332 (64%), Gaps = 4/332 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKPMW 63 I+ RL + I + F F+ +PGDPV ++ G+ G +S E+ L A+ LD+P+ Sbjct: 6 IVERLIATGVLMLAIAVFVFFFMRYLPGDPVDLIMGQEGNVSQEQIDLLKAQYRLDQPLH 65 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q Y+ GV+ GDLG S+ R PV + RF AT+EL + A++FA AV +P+G L+A Sbjct: 66 VQLSSYLSGVLQGDLGTSIVQRKPVTGLIMDRFPATIELALGALLFALAVALPIGTLSAY 125 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 R S D ++ A G SMP FW G++LIML +VH PV GR + + + +TG Sbjct: 126 WRNSPVDRLSMAGAFVGISMPGFWLGIVLIMLFAVHLKWLPVGGRATIGL---EPEHVTG 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 ++D+ + + +D++ H++LP++ LG + A++ R+ RSSMLE L +DY+R ARAK Sbjct: 183 LYVLDSILTRDGKALVDSLKHLVLPSVTLGAVMAALLARVVRSSMLEALSQDYVRLARAK 242 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL + V+ HALRNA++P VT++GL+VGTLL G ++ ET+FSWPG+GR ++DA+ RDY Sbjct: 243 GLHELVVVGKHALRNALIPTVTILGLEVGTLLGGNMIVETVFSWPGIGRLVVDAIFARDY 302 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 P+VQG V++ A L NL VD+ Y +NP+I Sbjct: 303 PLVQGVVIIYACTFALANLAVDIAYTYLNPKI 334 >UniRef50_UPI00019735EB peptide ABC transporter permease protein y4tP n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735EB Length = 328 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 136/334 (40%), Positives = 202/334 (60%), Gaps = 26/334 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + IL+RL +IP + + +TF F MIPGDPV+ + G++ +PE +L AE+G+DK Sbjct: 11 MAKMILKRLIQIIPILLIVLTITFIFTRMIPGDPVLTVLGDQA-TPEMVEKLRAEMGMDK 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY+ YI ++HGD G S PV E R TL++ + +M A +G+ VG+L Sbjct: 70 SIPEQYVMYILDILHGDFGTSFAYGRPVLELIAERLPNTLQISLTSMAIAVVIGLSVGIL 129 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ S++D+ A +AL G SMP FW +ML++L SV+ + P G + Sbjct: 130 SAVKQYSVWDYLATVIALVGVSMPRFWLALMLVLLFSVNLGILPAFGMGT---------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D V HMI+P I L P A R+TRSSMLEV+ D I+ Sbjct: 180 ---------------SGFGDTVLHMIMPCICLTVAPAATFTRITRSSMLEVINNDSIKAL 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+G++ ++ HAL+NA+ P+VTV GLQ+ T GAILTETIFSWPG+G ++ A+ Sbjct: 225 RARGMSEKAILWKHALKNALPPIVTVFGLQLATAFTGAILTETIFSWPGMGSLIVGAIDN 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR 334 RDY ++QG V+LVA + +NL+ D++Y ++NP+ Sbjct: 285 RDYSLIQGAVVLVAFAFVFINLITDIIYMIINPK 318 >UniRef50_D1Y609 ABC transporter, permease protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y609_9BACT Length = 324 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 206/338 (60%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI +R+ +++P +G+ LL F+ ++ PG P + G+ + E A+ AE GL+ Sbjct: 1 MLKFIGKRILMMVPVMLGVVLLVFSMMYFSPGKPEDYILGDMA-TVEDKAKFRAENGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY +YI + GDLGIS ++ PV E + RF T +L + + A A+GI G++ Sbjct: 60 PFIIQYFNYIRKALTGDLGISYTTKQPVVTEIMSRFPTTFQLAFFSTLIAVALGIVTGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ +I+D+ LA+ G SMP FW G++LI+L SV P SG S Sbjct: 120 SAVKQYTIWDNICRVLAMIGVSMPNFWQGLLLIILFSVVLRWFPSSGFSS---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H++LPA+ +GT A ++RMTRSSMLE + +DY+RTA Sbjct: 170 ---------------------WKHVVLPALTIGTSSAASVMRMTRSSMLEAIRQDYVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG + ++V+ HA RNA++PV+TV+G+ G +L GA ++E +F+ PGLG +I A++ Sbjct: 209 RSKGQSEVKVVWHHAFRNAIIPVMTVVGVNFGKMLGGAAISEVVFAIPGLGNLIIGAIRV 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ P+VQGG++ +A + +VNL++D+LY V+PRIR + Sbjct: 269 KNAPLVQGGIMFIALAMSIVNLVIDVLYAYVDPRIRSQ 306 >UniRef50_A9B5L6 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Bacteria RepID=A9B5L6_HERA2 Length = 346 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 164/348 (47%), Positives = 230/348 (66%), Gaps = 12/348 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I RRL +IP +GI+LL F + IPGDP +I+ GER +PE+ A L +L LD+ Sbjct: 1 MVGYIFRRLLGIIPVLLGISLLVFTLLRTIPGDPAIIILGERS-TPEQRAALRTKLKLDR 59 Query: 61 PMWQ----------QYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFA 110 P++ QY+ YI GD G S+K+R + +E RF AT+EL + A++ A Sbjct: 60 PLFLNFEGGNIFESQYVTYITNFATGDFGDSIKTRQAISKELKQRFPATIELALSALLIA 119 Query: 111 TAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS 170 VG+ GV++A KRGS D +++ +AL G S+PIFW G+M+ L SV S R+ Sbjct: 120 VVVGVTTGVVSATKRGSWLDASSMIVALLGVSIPIFWLGLMMQYLFSVKLKWLDPSLRL- 178 Query: 171 DMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLE 230 D P+TG L+D + G ++A H+I+P++ L T+PLA I RMTRS+MLE Sbjct: 179 DTSLQGSFEPITGLYLLDGLLLGRFDITMNAFKHLIMPSLALATVPLASIARMTRSAMLE 238 Query: 231 VLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGL 290 VL +DYIRTARAKGL+ I+ H LRNA++PV+TVIGLQ+G LL GA+LTET+FSWPG+ Sbjct: 239 VLYQDYIRTARAKGLSARITILRHGLRNALIPVITVIGLQLGFLLGGAVLTETVFSWPGI 298 Query: 291 GRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 GRWL+D + RDYPVVQ GV+ V+ + +L+N LVD+ Y +PRI++K Sbjct: 299 GRWLLDGILARDYPVVQSGVMFVSLVFVLINTLVDISYRFFDPRIQYK 346 >UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Tax=Bacteria RepID=Q5SIN2_THET8 Length = 306 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 153/338 (45%), Positives = 218/338 (64%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ + +PT +G+ LL F V + PGDP +++AGE +PE + GLD+ Sbjct: 1 MLTYLLRRILIAVPTLLGVVLLVFLMVRLAPGDPAILLAGEFA-TPETLEAIRTRYGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Q+ Y+ ++ GDLG S +SR PV EE F T+ L A++ A A GIP+G+L Sbjct: 60 PLPEQFALYLGALLQGDLGESARSRRPVLEELKTYFPNTVVLATAAILVALATGIPLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS D + LAL G SMP+FW+G++ I++ SV PV+G+ + Sbjct: 120 AALRQGSWLDLGVMVLALLGVSMPVFWFGLLAILIFSVELGWFPVAGKGT---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +AH++LPA+ LG A++ RMTR +++EVL +DYIRTA Sbjct: 170 ---------------------LAHLVLPAVTLGINATALLARMTRGTLVEVLSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVTV GL+ G+LLAGA++TETIF+WPGLG+ L+ ++ Sbjct: 209 RAKGLAERVVIFKHALRNALIPVVTVAGLEFGSLLAGAVITETIFAWPGLGQLLVGSILS 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VLLVA LVNL+VDLLY ++PR+R+ Sbjct: 269 RDYPVVQGAVLLVAFTFTLVNLMVDLLYAWIDPRVRYD 306 >UniRef50_A8F4X4 Binding-protein-dependent transport systems inner membrane component n=7 Tax=Thermotogaceae RepID=A8F4X4_THELT Length = 321 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 180/338 (53%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RRL + IP + IT++ F ++ PGD + + +S ++ + E GL+K Sbjct: 1 MLKYIGRRLVISIPELLVITMMIFLIMYAAPGDFLDQYRLDPSVSQKQLEAMEEEFGLNK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QYL ++ ++ G+LG S R PV + R ATL L + ++ + GI +GV Sbjct: 61 PPVIQYLVWLKNLLKGNLGYSFSYRRPVSDLIWERVAATLILSLISLASSWIFGIALGVF 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+K+ S D LA ++P F+ G++++ + P+SG S + Sbjct: 121 SALKKYSFADKLLTFLAFAFVAIPEFFLGLVMLY-FAAKSGWFPISGMKSVYYSSLST-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ILPA L A ++R R S+L+VL EDY+ A Sbjct: 178 --------------WERFKDILWHLILPATALSLGSFAGLMRYMRGSLLDVLNEDYVTFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HA+RNA+ P++T +G + LL GA+ E +F WPG+GR + AL + Sbjct: 224 RAKGMPERVVIFKHAMRNAINPMITFLGFSISGLLGGALFIENVFGWPGMGRLIYQALIQ 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D +V L+ A ++++ NL+ D+L +V+PR+R Sbjct: 284 QDMYIVMASGLISAILLVIGNLVADILLALVDPRVRLS 321 >UniRef50_A2SRD5 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Methanomicrobia RepID=A2SRD5_METLZ Length = 316 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 132/342 (38%), Positives = 200/342 (58%), Gaps = 31/342 (9%) Query: 1 MLQ-FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELG 57 ML+ + +RRL +IP I I+ L+F+ +++ PGDP IM G Q G Sbjct: 1 MLREYFIRRLLYLIPILIFISFLSFSLIYIAPGDPAEIMMTSPGGGYDEAAVEQFRVAHG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+P QY+ ++ GDLG S S PV+E + F+ TL L A++ A + IP+ Sbjct: 61 LDQPFIVQYMTWLKNAATGDLGYSYMSEQPVFETVINAFKNTLTLSALALVIALIIAIPL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G+++AVK +IFD AL G SMP FW ++I++ SV + P G Sbjct: 121 GIISAVKHNTIFDSLCRFGALIGVSMPNFWQAYLMIIVFSVILHWLPGGGF--------- 171 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +++MILPA+VLGT AV++RM RSSML+VLG++YI Sbjct: 172 -------------------GHGTDISYMILPALVLGTGSAAVMMRMVRSSMLDVLGKEYI 212 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 +TARAKGL+ V++ HAL+NA++P++TV+GL +G LL G+++ ETIF WPG+G ++ + Sbjct: 213 QTARAKGLSEATVLMRHALKNALVPIITVVGLSIGFLLNGSVVVETIFGWPGIGNLVVSS 272 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + DY ++QG +L VA + +++N +VDLLY NP IR+ + Sbjct: 273 ILSYDYMMIQGSILFVAIIFLVINFIVDLLYVWANPEIRYDR 314 >UniRef50_A6X362 Binding-protein-dependent transport systems inner membrane component n=17 Tax=Proteobacteria RepID=A6X362_OCHA4 Length = 315 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 137/336 (40%), Positives = 199/336 (59%), Gaps = 22/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+RL V+P +G++++ F + MIPGD + G +PE ++ +LGLDK Sbjct: 1 MPAYILKRLVAVVPVLLGLSIIVFLVMAMIPGDTATALLGSYA-TPENVERINRDLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY ++ ++HGD G S PV +E + RFQATL L A++ + G+ G++ Sbjct: 60 PLLQQYFIWMGNLLHGDFGRSFVLNRPVLDEVMERFQATLVLAGVALVLCSVFGLLAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ D T + L G S+P FW G++LI L +VHW + P SG + Sbjct: 120 SAVRQFGWADRTITFIVLAGISIPSFWLGLLLIYLFAVHWRILPASGMYAVY-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G+ D + H+ILPA L + VI R+TR +MLEVL +DYIRTA Sbjct: 172 -------------GGGDLKDLLWHLILPATTLAVVAAGVIARLTRGAMLEVLRQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RVI HA R A++ V+ VIG+Q G +L GA+ ET+F WPG+G L+ A+ Sbjct: 219 RAKGLNERRVIYGHAFRAALVSVIPVIGIQAGFVLGGAVYIETVFQWPGIGAMLVKAIST 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD +VQGGVL+VA +L NLL D++ +++PRIR Sbjct: 279 RDILLVQGGVLVVAASYVLFNLLADVIQTMLDPRIR 314 >UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH75_9FIRM Length = 321 Score = 364 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 204/338 (60%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I ++L +IP + ++++ F ++++PG+ M + G+ G + E+ QL AELGLD+ Sbjct: 3 MAASIGKKLLSMIPLALIVSIILFGLINLLPGNAAMAILGDSG-NLEQIEQLEAELGLDQ 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY++++ GV GDLG S+ + PV + R T EL V +++FA AVG+P+G++ Sbjct: 62 PVYIQYINWLKGVCTGDLGTSILTGQPVIDRIAERMPVTFELIVLSVVFAAAVGVPLGII 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV+R D+ +++ G +MP FW GM+LIML S+ + P SG Sbjct: 122 CAVRRNRASDYILSSVSIIGVAMPAFWVGMLLIMLFSIKLHWLPASGYTPF--------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 N ++ + M LP G A IVR TRS++L+VLG+DY+ TA Sbjct: 173 --------------FENPVENLRSMALPVFATGIALAATIVRQTRSAVLDVLGQDYMMTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 ++KG+ + HAL+NA++PV+T I +Q+ ++ G+++ ET+F PG+G+ ++DA+ + Sbjct: 219 KSKGVRYRTQLWRHALKNALIPVITAISMQIAGMIGGSVVIETVFLLPGMGKSMVDAIFQ 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+V G L++A IIL+N LVD++Y V+PRI Sbjct: 279 RDYPIVMGEALVIAVFIILLNTLVDVIYIFVDPRISRS 316 >UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJF6_9RHOB Length = 326 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 145/338 (42%), Positives = 213/338 (63%), Gaps = 12/338 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L +P +GI ++TF + +IPGDP ++ G+ +PE A L LGLD Sbjct: 1 MTDYIIRRLLLFVPMALGIIVVTFGLLLLIPGDPAAVLLGQEA-TPENIASLRDALGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + + Y+ ++ GD+G+S+ PV + + R AT+EL + A++ +T VG+ +GV Sbjct: 60 PWFLRLGRYMLELLQGDMGVSIFQNAPVSDIILGRLGATVELALVALLMSTVVGVFLGVT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++G + D A+ LA G SMP++W ++L++ +V P GR +V Sbjct: 120 AAIRQGGVVDAVAMLLAQIGISMPVYWLALLLMLGFAVQLGWLPAIGRGEPLVSA----- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + A+ G D++AH+ LPA+ L A+I R+ R+SMLEVL ED++RTA Sbjct: 175 ------LGMALRGNPAPLWDSLAHIALPALSLALNSAAIISRLVRTSMLEVLREDFVRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG+ R V+ HALRNA+LPVV+VIGL+ G LL GAILTETIF+WPGLG+ I A+ + Sbjct: 229 KAKGMRRRSVVWRHALRNALLPVVSVIGLRFGALLGGAILTETIFAWPGLGQLTISAISQ 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG VL A + V LLVDLLY V+PRIR + Sbjct: 289 RDIPLIQGIVLTFALIYASVTLLVDLLYAAVDPRIRLR 326 >UniRef50_A6TPV5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Clostridia RepID=A6TPV5_ALKMQ Length = 306 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 134/338 (39%), Positives = 211/338 (62%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I +RL IP +T++TF+ +H++PGDP ++ AGE G S E+ + +GL++ Sbjct: 1 MHIYIAKRLLQAIPVIFLVTVITFSLIHLMPGDPAIMRAGE-GASIEQVEAIREAMGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQYL ++ G++ GDLG S++ PV+ + R ATL L + + + + A+G+P+G+L Sbjct: 60 PIHQQYLSWVTGLLQGDLGYSLQDGRPVFSTLIQRLPATLYLVMASFVVSIAIGVPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D A G AL G S+P FW+ +M+++L S P SG + Sbjct: 120 SAVKQNTFIDSFARGFALLGISLPSFWFALMMMLLFSYKLQWLPASGSGT---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +AH+I+P++ LG +I RMTRS+MLEVL +DYIRTA Sbjct: 170 ---------------------LAHLIMPSLALGMASAGLITRMTRSAMLEVLKQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL VI HAL+NA+LPVVTVIGLQ+G L G+++ ET+F++PG+GR+ + L Sbjct: 209 RSKGLRAQIVIYKHALKNALLPVVTVIGLQLGYRLGGSVIVETVFAYPGIGRFAYNRLLA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++ G + + A + I+VN++ D++YG + PRIR+ Sbjct: 269 RDFPMIMGNLFIFAMIFIIVNIITDIIYGFLEPRIRYD 306 >UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component n=20 Tax=Bacteria RepID=A0R8T4_BACAH Length = 323 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 109/336 (32%), Positives = 179/336 (53%), Gaps = 20/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RR +IPT G +++ F ++PGD + ++PER +L GL+KP+ Sbjct: 8 TYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYID---SNPKLTPERAQELRELYGLNKPI 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 ++Y H++ +HGD G S++ + PV T + V A+ F + + +GV++A Sbjct: 65 IERYFHWLVNALHGDFGFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ S FD S P F+ G+ LI L++V L P+ G + Sbjct: 125 TKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVDLKLLPIGGMIDIGSNSTGI---- 180 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ++ + HM+LP +L + + + R R+ ML+V+ +DYIRTARA Sbjct: 181 -------------AYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARA 227 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RD Sbjct: 228 KGLKERTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRD 287 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Y V+ + ++ + I+ N L D++Y V+PRIR K Sbjct: 288 YTVLMAFTMFLSCLTIMANFLADIVYAFVDPRIRLK 323 >UniRef50_C5EKW0 Glutathione transport system permease protein gsiC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKW0_9FIRM Length = 307 Score = 363 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 199/338 (58%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ L+R+ + IP IG+ L+ F + +IPG+PV M GE ++ ++ E+GLD+ Sbjct: 1 MLKKCLKRILISIPVLIGVVLIIFIMLRIIPGNPVTTMLGEH-VNQAIIDKVSREMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + GD G S + V + F T++L VCA + A +GI G++ Sbjct: 60 PLYIQFFRYVGNALKGDFGTSYRLNRNVTGIILEAFPNTVKLSVCAAVVAWIIGITAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ + D +G AL G SMP+F ++L + + L PVSG Sbjct: 120 AAVKQNRLLDRLFMGCALLGVSMPVFMTALVLQYVFAFKLKLFPVSGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D++A M+LPAIVLG I RMTRS+++E + DYIRTA Sbjct: 168 -------------------DSLAAMVLPAIVLGWNSAGSIARMTRSNLVEAMQGDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ HAL+NAMLPVVT++ LQV ++L+GA+LTE++F PG+GR ++A++ Sbjct: 209 RAKGLREWGVIVHHALKNAMLPVVTMMALQVSSMLSGAVLTESVFGIPGIGRLAVNAIET 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG V+ ++I NL+ D+LY V++PRIR Sbjct: 269 RDMPLLQGTVIFTTILVIAGNLVADMLYSVLDPRIREG 306 >UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXG5_9CLOT Length = 335 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 196/338 (57%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+L+R ++ IG+T+L F + +P DP AG + E+ ELGLDK Sbjct: 1 MAKFLLKRFASLVLVIIGVTMLVFLATYYLPSDPARAAAGPSATN-EQVEAKRVELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL Y+ G++ D+G S K++ PV +E R ATLEL ++I + + +G + Sbjct: 60 PIYVQYLEYMKGLLRLDMGTSFKTKQPVAQEISSRLSATLELTAVSLIVFFVLALILGSV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRG + D ++ G ++P +W ++ + P R+ V P Sbjct: 120 AALKRGGVLDGMIRFFSVAGMAVPPYWLALIFQYVFYYRLQWLPAGYRLP--VGTMPPEP 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF L+D+A G+ + A H++LP + L + RM R+ +L+ L +DYIRTA Sbjct: 178 VTGFYLLDSAFAGDWALLLQAARHLLLPVLSLVLGYCGITTRMMRTQLLQELRQDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL VI HA++NA+ P++T++G+Q G ++ G +L E IFSWPGLG + +DA+ Sbjct: 238 RSKGLPEHTVIRRHAMKNAISPILTLLGMQAGGMIGGTVLIEKIFSWPGLGSYALDAIAS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D VV G L +A + IL+NLLVD+ Y +++PR+R Sbjct: 298 LDLMVVAGITLTMAVIFILINLLVDISYVLIDPRVRLS 335 >UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI5_BREBN Length = 306 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 132/335 (39%), Positives = 203/335 (60%), Gaps = 32/335 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++++RL ++ T +G+++L F VH+IPGDP + G+ +PE +Q+ A+LGLD+ Sbjct: 1 MRRYVIKRLLSLVGTLLGVSVLIFLMVHLIPGDPATQILGQFA-TPEAISQMRAKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+WQQY+ ++ + GDLG S+ + VW++ + RF T++L + ++I A GI +G + Sbjct: 60 PLWQQYMRFVGNLFTGDLGTSLFTGEKVWDQIMNRFPITMQLAILSVIIAAIFGILLGTI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ +I D V +L G S P FW + LI + + L P+SG Sbjct: 120 AAVKQNTIIDRLVVLTSLLGISAPGFWIALFLIWIFAYKLALFPISGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ++LPAI LG +I RMTRSSMLEV+ +DY+RTA Sbjct: 168 -------------------EGIHSLLLPAITLGMAEAGMIARMTRSSMLEVIKQDYMRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG RVI+ H L NA++PVVT++GLQ G L+AGA++ ET+FS G+G I+A+ + Sbjct: 209 EAKGAALFRVILSHGLPNAIIPVVTMLGLQFGALMAGAVVVETVFSLQGIGSLAIEAISK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD P +QG V +A + L NL+VDL+Y ++PRI Sbjct: 269 RDMPTIQGMVFFMALIFALTNLIVDLIYSRIDPRI 303 >UniRef50_D1C940 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C940_SPHTD Length = 320 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 122/342 (35%), Positives = 197/342 (57%), Gaps = 26/342 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q+++RR+ ++P +GIT++TFA +++PG P+ + + PE ++ LGLD+ Sbjct: 1 MGQYVVRRVLQIVPLVLGITIITFALANLVPGSPISDLEFNPQVRPEDRERIAKALGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ V GDLG+S+ + PV + + + TL L V A+I + + IP+GV Sbjct: 61 PLHVRYIQWLSHVARGDLGLSLITYQPVMKTIMEKLPNTLLLTVTALILSLLIAIPIGVY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLV----SVHWNLTPVSGRVSDMVFLD 176 AV+R S FD A+ G++MP FW G+M+I+++ P G Sbjct: 121 GAVRRNSAFDQVTTVGAVAGFAMPTFWLGLMVILILVRMKGAGLPTLPTGGVCELGNC-- 178 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 + + H+I PA VL + A R RS M+EVL +DY Sbjct: 179 --------------------TVLSRIQHLIAPAFVLAFVQTASWTRYIRSQMIEVLRQDY 218 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +RTA AKGL + V+ H LRNA+LP+VT++ L + TL +G+++ E IF+W GLGR ++D Sbjct: 219 MRTAEAKGLREVVVVFRHGLRNAILPLVTLLALDLPTLFSGSVIVEQIFTWNGLGRLILD 278 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ +RDY VV G L V+ + ++ NLL D++YGV++PRIR+ Sbjct: 279 SVNKRDYTVVMGVTLFVSVLTVVANLLADIVYGVLDPRIRYD 320 >UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41 Tax=Rhizobiales RepID=Y2551_BRUO2 Length = 319 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 188/338 (55%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML++ L RL + + + +T+L F + + PGDP+ ++ L A+LGLD Sbjct: 1 MLRYCLHRLLIGLGMLLALTILIFVLLQLTPGDPIDAYINPNVAMTQAEMDALRAQLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QYL ++ + G+LG S+ + V R TL L + A +G+ G Sbjct: 61 RPLPVQYLAWLGQAVQGNLGHSLQRFNETVSGLIASRIGPTLLLMAAGLAIAIVIGVTTG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++AV+R S D++ LAL G S P F ++ + + SV P G ++ Sbjct: 121 IISAVRRNSFPDYSFSVLALLGISSPAFLTALLGLYVFSVRLKWAPSGGMLTPAT----- 175 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 D + D + H+ LPA+VL A+I+R RSSMLE L +DY+R Sbjct: 176 ----------------DFSIPDLLRHLALPALVLSIGHAALIMRYMRSSMLETLNQDYVR 219 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ V++ H LRNAMLPVVT+IG +G + GAI E++F+WPG+G LI+A+ Sbjct: 220 TARAKGVREFWVVVKHTLRNAMLPVVTLIGSTIGLAVGGAIFIESVFNWPGMGLLLINAV 279 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + RDYPV+ G L++ +I+VN+L DL Y V++PRI+ Sbjct: 280 ETRDYPVIMGATLVIGACVIIVNILTDLAYAVIDPRIK 317 >UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=3 Tax=Paenibacillaceae RepID=C0Z5Q8_BREBN Length = 323 Score = 361 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 126/339 (37%), Positives = 200/339 (58%), Gaps = 22/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++RR+ + IT+++F +H PG P+ +M G+SPE + +GLD+ Sbjct: 1 MTEYLVRRVLQAVLVLFLITVVSFGLMHAAPGGPLKVMLSP-GMSPEAQLIQMKNMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY+ ++ ++ GDLG + K+ +PV + P T L A + + IP G+ Sbjct: 60 PVYIQYMKWVGNLLQGDLGHTFKNNVPVGDILWPTVWNTFVLMSVAWGLSMLIAIPWGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + K+ + D A +A G++MP FW+G+ML ++ NL P+S Sbjct: 120 NSTKQYGLSDQIASIVAYLGFAMPTFWFGIMLQQYFAMQLNLLPLS-------------- 165 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D G++G D + H+ILP VL + +A V+ TR+SMLE L +DYIRTA Sbjct: 166 -------DMYTMGKEGQISDLILHLILPVTVLTLVNIAAYVKYTRASMLEALEQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI HALRNA++PVVT+IGL + TL+AGA LTE++F+WPG+GR ++ Sbjct: 219 RAKGMKERRVIFRHALRNALIPVVTIIGLDLPTLVAGAALTESVFNWPGMGRLFVEMAVA 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R+Y V+ LL++ M+I+ NLL DL+Y +V+PR++ + Sbjct: 279 REYSVLMSITLLISLMVIIGNLLADLIYALVDPRVQLGR 317 >UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipeptide) n=35 Tax=Bacteria RepID=Q7CVP2_AGRT5 Length = 315 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 147/336 (43%), Positives = 207/336 (61%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I +RL + IPT + I++ F+ ++PGDPV+ MAGE P L + L+ Sbjct: 1 MPVYIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVLAMAGEER-DPATIEFLREKYRLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL+++ GV+ GD GIS+++ PV E + T++L V AM FA +GIP+G+L Sbjct: 60 PVPLQYLNWLGGVVTGDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ + D+TA +AL+G S+P FW G+MLI+LVSV P SG S V Sbjct: 120 AAVKKNTWIDYTANIVALSGLSIPNFWLGIMLILLVSVKLGWLPASGYESIFVDP----- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + ++ MI+PA VLG A ++R TRS+M+ VL DYIRTA Sbjct: 175 ------------------VRSIETMIMPAFVLGNALAATLMRHTRSAMVAVLSSDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ +I+ H+ RNA+LPV+T++ L G LLAGA+LTE IF+ PG G+ +DA+ Sbjct: 217 RAKGLSPREIILSHSFRNALLPVITLLALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFT 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY VVQG VL A IL+NLL D+ Y ++NPR+R Sbjct: 277 RDYAVVQGIVLCTAVGFILMNLLADIAYVLLNPRLR 312 >UniRef50_C0D8X7 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8X7_9CLOT Length = 313 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 126/338 (37%), Positives = 209/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I +RL ++IP IG++ L + + + PGD + +A + + E+ L A+ G D+ Sbjct: 1 MGKYIGKRLLMLIPVIIGVSFLIYFIMDLAPGDVISQLAPDNATT-EQIEALRAQYGYDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 ++ +Y Y+ G+ G+LG+S + PVWE ++ R ATL L + A+I + A+ +P+G+ Sbjct: 60 SVFYRYAIYMQGLFRGNLGVSFLTGQPVWEMYMQRLPATLSLTLGAIIVSIAISLPLGIF 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ GS+ D+ A+ LAL G SMP FW G++LI+ S+H L P G Sbjct: 120 SAIHNGSLGDNAAMVLALLGLSMPNFWLGLLLIIAFSLHLGLFPSGGM------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ ++LPAI +GT A++ R TRSSML+V+ +DY+RTA Sbjct: 168 -------------------SGLSSIVLPAITIGTGYTAIMTRTTRSSMLDVIRQDYLRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ VI HAL+NA++P++TV+G Q+ + G++LTET+F+WPG+GR +ID++ + Sbjct: 209 RAKGVSEKAVIRRHALKNALIPIITVVGTQMAACIGGSVLTETVFAWPGVGRLIIDSVNQ 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P V G +++ MI ++ L++DLLY V+PRI+ + Sbjct: 269 RDVPAVTGSIIMTTIMISVILLVIDLLYAFVDPRIKAQ 306 >UniRef50_Q2YJK1 Putative peptide transport system permease protein BAB2_1050 n=36 Tax=Proteobacteria RepID=Y1050_BRUA2 Length = 314 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 125/338 (36%), Positives = 190/338 (56%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M IL+R+ IP + + +LTF + ++PGDP +++AG+ G SPE ++ ELGLD+ Sbjct: 1 MTALILKRVAQAIPVMLIVAILTFLLMKLLPGDPAILIAGD-GASPETVERIRVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q ++W + H DLG S PV + R T+ L + A VGI +GV+ Sbjct: 60 PTVVQLGQWLWNLFHFDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA R S FD + LAL G S+P FW ++ ++L SV P +G V + Sbjct: 120 AAYLRDSWFDTGVMSLALLGVSVPSFWLAILAVILFSVTLGWFPSAGYVPFL-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + + +ILPA +L + + RMTRS MLEV+ +DYIRTA Sbjct: 172 ---------------DSPLGWLRSLILPASILALFQIGYLARMTRSEMLEVMDQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ V+ HA RNA++ V+TV G L+ G+++ E IF+ PGLGR L+ A+ Sbjct: 217 RSKGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQAILA 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQG +L + + + +N+LVD+LY + +PR+R+ Sbjct: 277 RDLPVVQGTMLFLGFLFVAINVLVDILYTIADPRVRYD 314 >UniRef50_B9ZI20 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZI20_NATMA Length = 302 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 130/327 (39%), Positives = 197/327 (60%), Gaps = 25/327 (7%) Query: 12 VIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIW 71 +IP +G+T++ + V+ PG+P + G+ G SPE AQL E+GLD+P +Y ++ Sbjct: 1 MIPVMLGVTIVISSIVYAAPGNPARLALGD-GASPEAVAQLEQEMGLDQPAHIRYFDWMA 59 Query: 72 GVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDH 131 GV+ GDLG S++S V + R TLEL + AM + IP+GV++AV++ S D+ Sbjct: 60 GVLQGDLGTSIQSGRAVTTLIIERLGPTLELALVAMALTVIIAIPLGVISAVRQYSWVDN 119 Query: 132 TAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAI 191 T++ A+ SMP FW G++LI L +V W PVSGR + Sbjct: 120 TSMFFAIFWLSMPSFWLGLILIYLFAVRWQFFPVSGREGVIFTFT--------------- 164 Query: 192 WGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVI 251 + ++LPAI GT ++ R+ RSSMLE+L EDYIRTAR KG+ VI Sbjct: 165 ---------WWSFILLPAIATGTRRAGLLTRLMRSSMLEILNEDYIRTARGKGIGSKAVI 215 Query: 252 IVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVL 311 H ++NA++PVVT+IGLQV + +G ++ E +FSWPG+GR L+DA+ +RDYPVVQG +L Sbjct: 216 YTHGMKNALIPVVTLIGLQVPLIFSGTVIIEVVFSWPGMGRLLVDAVLQRDYPVVQGTIL 275 Query: 312 LVATMIILVNLLVDLLYGVVNPRIRHK 338 + + ++++ N VD+ Y ++PRI + Sbjct: 276 VYSVIVMVANFGVDIAYTYLDPRIDYS 302 >UniRef50_Q1ARP2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARP2_RUBXD Length = 334 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 131/334 (39%), Positives = 208/334 (62%), Gaps = 4/334 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQ 64 +LRRL ++ T + + + F + ++PGD ++A + P++ AQ+ ELGLD+P+W+ Sbjct: 5 VLRRLAILPVTALLVATVVFFVLRVVPGDASDVLASQ-ATDPDQRAQITQELGLDEPLWR 63 Query: 65 QYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVK 124 QYL ++ G+ DLGIS S PV E T+EL V +++ VG+ G++AA Sbjct: 64 QYLLFLSGMARLDLGISFYSGQPVVELLFETVPVTIELAVASVLVMVGVGVSTGMIAAAF 123 Query: 125 RGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGF 184 R + D A +A+ +SMP FW G++LI++ V+ P GR+ V D P T F Sbjct: 124 RNTWLDAAARFVAVVLFSMPWFWLGILLIVVFGVYLGWLPTFGRLPATVTYD---PTTNF 180 Query: 185 MLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKG 244 +L+D I G + + H+ILPA+ +G + ++TR+S +E + ED++RTAR KG Sbjct: 181 ILVDALIQGRPDLILPWLQHLILPAVTVGLTTAGFVTQITRTSFIETMFEDFVRTARMKG 240 Query: 245 LTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYP 304 ++ RV H RNA LP+VT++GLQ G LL GA+++E +FS+PG+GR +++A+ +RDYP Sbjct: 241 MSEFRVFWGHIFRNAALPIVTIVGLQFGALLGGAVVSEAVFSYPGVGRMMVNAIFQRDYP 300 Query: 305 VVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VVQG L++A++ ILVN L D+ Y ++PR+R Sbjct: 301 VVQGAALVIASLYILVNTLTDISYLYLDPRLRRS 334 >UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteobacteria RepID=A8I8E2_AZOC5 Length = 334 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 205/338 (60%), Gaps = 17/338 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 +F RRL +P +GI + +F +H+ PGD V +MAGE G A+L A+ GLD+ Sbjct: 13 ARFFARRLLQAVPVLLGIVIFSFVILHLAPGDAVDVMAGEAGTGDAAYMAELRAKYGLDQ 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q L Y ++ DLG S+++ PV + + R TL L +++ + A+G+ G + Sbjct: 73 PLPVQLLRYGTQILQLDLGYSIRNNSPVRDLILQRLGPTLLLMSVSIVASVAMGVLFGAI 132 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++R ++ D +AL Y+MPIFW G+MLI+L SV + P G Sbjct: 133 AAIRRNTLLDDLISLVALLAYAMPIFWIGLMLIILFSVTLGVLPSGG------------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 FM + G +D H++LPA+ L A+ R+ R+SMLEV+G DYIRTA Sbjct: 180 ---FMDVARQDVGPLARAVDIGRHLVLPALTLSLFYFAIYTRLMRASMLEVMGLDYIRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +V I H +RNA+LP+VT++G+Q+ +LL GA++ ET+F+WPG+GR DA+ + Sbjct: 237 RAKGLGAAKVTIRHVVRNALLPIVTMLGMQMASLLGGAVVVETVFNWPGIGRLTYDAVFQ 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ G +L+ + ++I +N+LVDL Y ++PRI+ + Sbjct: 297 RDYALLIGILLMSSALVIFINMLVDLAYSWLDPRIKAR 334 >UniRef50_Q6ML30 Dipeptide transport system permease protein DppB n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML30_BDEBA Length = 323 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 192/339 (56%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIM-AGERGISPERHAQLLAELGLD 59 M FI RR+ + + ++ + F + ++PGDPV +M A I+ E A+L + GLD Sbjct: 1 MTTFITRRILQTLAVIVILSYVCFYLMSLMPGDPVDMMVASNPKITAEDVARLKSLYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P++++Y ++ ++ GDLG S R+PV E PR T L ++I + + IP+GV Sbjct: 61 QPVYKRYASWMGSILQGDLGYSRTYRVPVQELMGPRLWNTFLLSAISLILSIGIAIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A+K GS D+ + G S+P FW ++LI+L +V + + P G Sbjct: 121 ISALKPGSRTDYIVNLFSFGGISIPSFWLAIVLIILFAVKFPVLPAGGT----------- 169 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 I + G + D ++ILP + L + R TRS+MLE + D+IRT Sbjct: 170 -----QTIGASDLGLWADIKDRSIYLILPVLSLSIQQIGRFSRFTRSAMLEAMRNDFIRT 224 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+R VI H RNA++P++T++ L L +GAILTET+F++ G+G+ + D++ Sbjct: 225 ARAKGLSRKTVIWQHGFRNALIPLITILALSFSGLFSGAILTETVFAYQGVGKLVYDSII 284 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V ++ +M++L+NL+ D++YG +PRI ++ Sbjct: 285 GNDYNVAMISFVISVSMVLLMNLVADIMYGFADPRISYQ 323 >UniRef50_C0QDJ0 DppB1 n=74 Tax=Bacteria RepID=C0QDJ0_DESAH Length = 330 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 205/338 (60%), Gaps = 31/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ +R ++P +++L FAFVH++PGDP +MAG+ L ELGLD+ Sbjct: 24 MLKYFFKRCMAILPVLFVVSVLAFAFVHLLPGDPARMMAGDDA-DEATIEMLRTELGLDR 82 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL Y+ ++ GDLGIS+++ + V++E R+ T+ L M ++ +GI G + Sbjct: 83 PLPVQYLTYMGKLVRGDLGISLRTNLTVFDELKLRYLPTMYLAFAGMAWSVVIGIFFGAV 142 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ G D+TA+ ++++G S+P FW G++ I L SVH PV+G Sbjct: 143 AAIYSGKWQDYTAMMVSVSGISVPQFWLGLLAIQLFSVHLGWLPVAGYTGKFSE------ 196 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +ILP+ LG A++ R T S+ L+VLGE+YI TA Sbjct: 197 ------------------------LILPSFTLGATVAAIMARFTLSAFLDVLGEEYISTA 232 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+T V+ HA RNA++PV+T++GLQ G LL G+++ ET+F+WPGLGR++I+A+ Sbjct: 233 RAKGVTETLVMWKHAFRNALIPVITMVGLQFGFLLGGSVVVETVFAWPGLGRYMIEAVAV 292 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +LL + + +NL+VD++Y ++NP IR++ Sbjct: 293 RDYPVLQALLLLYSFHFVFINLVVDMVYALINPEIRYE 330 >UniRef50_A8U4H5 Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT Length = 336 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 207/338 (61%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F LRR L++ +G+ L+TF H+ P DP + AG + + E GLD+ Sbjct: 1 MLRFTLRRAVLMVFMLLGLLLITFTISHIAPSDPAALAAGPDA-NVAMIERYRVEYGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++Q+ Y+ ++ G+ G S+ + VW++ V F T+EL +++ A A+G+P+GV+ Sbjct: 60 PLYEQFAIYLQRLLTGNWGKSIHTTRQVWDDLVSYFPNTVELVAFSILIAVALGVPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV + DH L ++G +MP+FW G+M + ++H P+ GR+ + D Sbjct: 120 AAVNQNRATDHIIRILTVSGVAMPMFWLGLMAQLYFALHLGWFPLGGRI--EMMTDPPEA 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T +L+D+ + G+ G F + + H++LP++ L LA I+R+ R+ MLE L +DYI A Sbjct: 178 ITHLLLVDSLLRGQFGTFAEGLHHIVLPSVALCLPALASIIRVNRAEMLETLKQDYIVNA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL+ R++ ++AL+NAMLP + +IGL+ G +L G +L ET+F WPG+G + + A Sbjct: 238 RAHGLSTFRIVALYALKNAMLPTMAMIGLRFGWMLGGTVLVETVFDWPGIGLYAVQAAIS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+ + G +++ ++ N ++DL+YG+++PR+R + Sbjct: 298 SDFEPIMGATIVLGFFFMMTNFVIDLIYGILDPRVRTQ 335 >UniRef50_D1C147 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C147_SPHTD Length = 320 Score = 359 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 118/334 (35%), Positives = 185/334 (55%), Gaps = 24/334 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RR+ L+ P +G++++ F +H+ PGDP + E+ P Q+ LGLDKP+ Sbjct: 7 NYIVRRILLLFPLLVGLSMVVFTIIHLAPGDPALAFVSEQSFDPTVVEQVRKNLGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY + V D G + PV R T++L A+ + AV IP+G+++ Sbjct: 67 PVQYGIWASKVARFDFGTAYTFNRKPVITLIGERLSNTVKLQALAISISLAVAIPLGIIS 126 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A ++ S+ D+ A G A G ++P FW +ML + +V P S Sbjct: 127 ARRQYSLVDNLATGGAFLGLALPDFWLALMLQLFFAVRLGWLPASTAGP----------- 175 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 E F++ +++ +LPA VL +A+ R RSSMLEV+ +DYI TAR Sbjct: 176 ------------EAEGFVEKLSYFVLPATVLAIPTIAIFTRFMRSSMLEVIHQDYITTAR 223 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ HALRNA +P+VTV+G Q+ LL+G+++ E +F+WPGLG A+ +R Sbjct: 224 AKGLAERAVVFRHALRNAFVPMVTVVGNQLPRLLSGSVIVEAVFAWPGLGHLGYQAILQR 283 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DYPV+ LL I+++N++VD+LY +++PRI Sbjct: 284 DYPVILALTLLTGAAILVINVIVDVLYAILDPRI 317 >UniRef50_C5BVI8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVI8_BEUC1 Length = 361 Score = 358 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 195/337 (57%), Gaps = 3/337 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDKP 61 +F+LRRL + + +G+T +TF V ++PGD + E + PE A A+ GLD+P Sbjct: 27 RFLLRRLVITVFLLLGVTAVTFLLVQLVPGDSMTATLSETALADPEVVAAYRAKWGLDEP 86 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY Y+ ++ GDLG+S ++ PV + + ATLE+ + AM+ + +G VG+ A Sbjct: 87 LLTQYGIYLSNLLQGDLGVSTQTGRPVLGDLLTYVPATLEIALPAMVLSVVIGTAVGLYA 146 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV++G D L G S P FW ++ + + + P GR+S +L + Sbjct: 147 AVRQGRAGDQVVRVGTLLGLSTPPFWLSLVALYVFFYLLGVAPSGGRLS--TYLSPPPRV 204 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG +D + G+ + DAV H++LP VL + +A +VR RS+MLEVL +DYI AR Sbjct: 205 TGMFTLDALLAGQWMVWWDAVQHLVLPVAVLTCLTVATLVRFVRSAMLEVLDQDYIAAAR 264 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ H LR ++PV+TV GL LL+G +L E IFSWPG+G++ A Sbjct: 265 AKGLPTSVVLRRHVLRAGLVPVITVSGLAFAALLSGTVLVEQIFSWPGVGQYAYRAASGL 324 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P V G L VA + +VNL+VDLLYGV++PRIR Sbjct: 325 DLPAVIGVGLFVAVVYTIVNLVVDLLYGVIDPRIRLS 361 >UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicutes RepID=C0ZJM9_BREBN Length = 318 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 175/338 (51%), Gaps = 20/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + L+R+ + T G ++L F + PGD V ++ ER +L A GLDK Sbjct: 1 MTSYFLKRVFYMALTLFGASILIFFLYALTPGDFVDTSL---KLTAERKLELKAMYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++Y ++ + GD G S++ + PV + L + + F + I +GVL Sbjct: 58 PVVERYFIWMKNALQGDFGYSLQYQQPVMSLLNDYIWNSFLLAITSTFFTWLIAISIGVL 117 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++ S FD S+P+F+ G++ I L +V L P G + Sbjct: 118 SAARQHSWFDALVTIGVFAAMSLPVFFVGLLFIKLFAVDAKLFPAGGMMMIGSKETGLTY 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D V HM LP VL + + + R R++MLEV+ +D++RTA Sbjct: 178 A-----------------WDVVQHMFLPVTVLTLLSVGTLTRYFRTNMLEVIQQDFVRTA 220 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRNA+LP +T++G ++ L GAI+TE IF+WPG+G+ + A Sbjct: 221 RAKGLKEKVVLHKHALRNALLPAITLLGFELPALFGGAIITEKIFNWPGVGQLYMQAFSV 280 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G + +A + ++ NL DLLY V +PR+R K Sbjct: 281 RDYPLLMGFTMFLAILTVIGNLSADLLYRVADPRVRLK 318 >UniRef50_B0PE95 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE95_9FIRM Length = 308 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 199/337 (59%), Gaps = 30/337 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I+RRL +IP +G+TL+ F V++IPGD ++AGE Q+ +GLDK Sbjct: 1 MPRYIVRRLLALIPVILGLTLVIFLLVNVIPGDTARLIAGEYA-DEATVEQIRTTMGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY +Y+ ++ GDLG S ++ PV EE + F T++L V + + VG+ +G+ Sbjct: 60 PILVQYGNYLLDLVQGDLGRSYQTHRPVLEEILTVFPKTIQLAVTTEVISIVVGLFLGMS 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RGS+FD + G S+P FW+ ++L ++++V + P SG Sbjct: 120 AAVRRGSLFDRGITMFGVLGLSIPQFWFALILQLVLAVKFGWLPPSGYQGGFDI------ 173 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ILPAI LG ++ R++RS+ LEVL ++YIRTA Sbjct: 174 -----------------------YIILPAITLGIPSAGMMARISRSAFLEVLPQNYIRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HAL+NA++PV++++G + LL G ++ E++FSWPG+G++ DAL Sbjct: 211 RAKGLREKSVIWKHALKNALIPVLSLVGTDMSRLLTGTMIVESVFSWPGIGKYGYDALFY 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +D P +Q VL++A I LVNL VD+LY +PR+R+ Sbjct: 271 KDMPALQATVLVLAVSICLVNLAVDVLYAAADPRVRY 307 >UniRef50_A6TTE0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTE0_ALKMQ Length = 323 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 180/338 (53%), Gaps = 15/338 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RR+G++ + I + F +PGD + + PE G + Sbjct: 1 MLKYIARRVGIMTVMILLIATMIFFLFRAMPGD-ATAYIVDPSMPPEAREIARERYGFND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY ++ ++ D G S PV R ATL L + AMIF+ +GI G Sbjct: 60 SKWVQYTIFMKDLVRLDFGNSYFYGRPVMSLIGERLPATLILMLTAMIFSYIIGIFGGAW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A KRGS + + +L S P FW G+M+I+L + P G + D Sbjct: 120 MAWKRGSKLESAGITFSLIFRSAPTFWVGLMMILLFAAKLRWVPAQGMRTSGYTGDT--- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + E +D + H+ILP++V G +A + + R+SMLEVL EDYI A Sbjct: 177 -----------FAEIFLNLDFLRHLILPSLVAGLYFIATPLLIMRNSMLEVLSEDYIEMA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL ++ HA RNA+LPVVT L +G+ + G +L E +FSWPGLGR ++ A+ R Sbjct: 226 KAKGLKERTILYKHAARNALLPVVTAGALFIGSAIGGQVLIEYVFSWPGLGREIVQAVTR 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+ QG ++++ M++++NL+ D+LY V++PRI +K Sbjct: 286 RDYPLAQGAFIIISAMLMMMNLVADILYAVLDPRISYK 323 >UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA13_9FIRM Length = 321 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 178/338 (52%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I +R + + F + + PGDP+ IMAG + E L + GLDK Sbjct: 1 MKRYIGKRALSGLLVVLLSVCFNFTLIRLAPGDPIRIMAGTDNPNEEMIEALQQKYGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +Q++ ++ V GDLG S S V + + TL L + A++ + +G +G+ Sbjct: 61 SIPEQFVMFLGNVAKGDLGYSYISDESVIKLIGEKIGPTLALSLTAVLLSVTIGTLIGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS FD ++ + P FW G+M+I++ + P SG V+ Sbjct: 121 AARKNGSKFDQFVCSISYVFDATPGFWLGLMMILIFASTLKWFPTSGMVNLRANYKG--- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D H++LP + R+ RSS+L+V+ ED+I T Sbjct: 178 --------------FAYFADVCRHLVLPITTMVLTQTPYYFRIARSSVLQVMSEDFITTF 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +A G+ R+ + LRNA+LP VTV+G+ + LL+G++L ET+F+WPG+GR + ++ + Sbjct: 224 KATGMKESRIFNKYVLRNAILPTVTVLGMSLAFLLSGSVLIETVFAWPGMGRLMFSSISK 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G L+ + +I + +LVD+LYG ++PRIR+ Sbjct: 284 RDYPVLTGIYLVTSVVICIAMILVDILYGFIDPRIRYD 321 >UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter n=41 Tax=Cyanobacteria RepID=B1WR73_CYAA5 Length = 344 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 119/335 (35%), Positives = 187/335 (55%), Gaps = 4/335 (1%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I+ RL L I L F + PGDP + G R L LGL++P+W Sbjct: 13 YIVARLLLAPLMVWTIVTLVFLLLRATPGDPADAILGNRA-PEATKEALRESLGLNQPLW 71 Query: 64 QQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY Y+ ++ +LG S+ S VWE F AT+EL +M+ A A+G+ +G+L+A Sbjct: 72 LQYFAYLGQLLSFNLGTSITSQGQSVWEIIGQHFPATVELTFYSMVVAIAIGVTIGILSA 131 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + + D + YS+PIFW GM+ ++ +V P+ R + + T Sbjct: 132 SRPNTSVDVGGRLFGIITYSLPIFWVGMLFQLIFAVQLRWFPLGTRFP--LNQTPPSGWT 189 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G +D+ G G F+ AV ++ILP LG + + RM R ++ + L DY+ ARA Sbjct: 190 GIYTLDSLFSGNLGQFLTAVYYLILPCFTLGLLLSGIFERMVRVNLRQTLQADYVEAARA 249 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G+ R+++ HAL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ RD Sbjct: 250 RGIPERRILLAHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAIAVRD 309 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 YP VQG ++ ++++V++L+DL+ ++PRIR+ Sbjct: 310 YPTVQGIMVFFGAIVVVVSILIDLINAYIDPRIRY 344 >UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bacteria RepID=Q8YVG6_ANASP Length = 335 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 192/339 (56%), Gaps = 19/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++ RL + IPT I I+L+ F + + PGDP+ A I+ E + LGLD+ Sbjct: 16 MNKYLINRLLVAIPTLIAISLVIFTILALAPGDPMGEFALNPSITAEVRENIKRSLGLDQ 75 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ + GD+G S SR PV + + R TL + A + + IP+GV+ Sbjct: 76 PIHIRYIKWVIAFVRGDMGYSFTSRSPVIDLILQRLPTTLWVVGAAYLLGAILAIPLGVI 135 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+KR +I DH L G+S+P F+ G++ I++ S+ P Sbjct: 136 SALKRHTIIDHVLTTLVFFGFSLPTFFTGLLFIIIFSIQLKWLP---------------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+ T + +FI + I+P VL A+++R RS +LE + +DY+RTA Sbjct: 180 ---FIYNSTLQVKDWQSFIAQIQQSIMPISVLALWQTAMLMRFVRSEILENIHQDYVRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL++ VI H LRNA++PVVT+I L + ++ GA++TE +F PG+G LID++ + Sbjct: 237 YAKGLSKFVVIRRHILRNALIPVVTLIALDIPSVFTGALVTEKVFRVPGIGALLIDSIYK 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 D PVV + A +I++ NL+ D+LYG ++PR+++ K Sbjct: 297 NDTPVVMAITFIYAILIVIFNLVADILYGFLDPRVKYTK 335 >UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n=94 Tax=Firmicutes RepID=C9XN43_CLODC Length = 319 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 188/339 (55%), Gaps = 23/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ IL R+ ++IP I I++L+F + + PGDP +S + + +GLDK Sbjct: 1 MLKLILNRVKVLIPMLILISILSFGLLELAPGDPADAYINPL-MSSQDIENIRVNMGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ +YL+++ + G+LGIS + +PV E+ + + T L ++IF+ V IP+G+ Sbjct: 60 PVYIRYLNWLKNTLSGNLGISYINHMPVTEQIMEKMGNTFILMGTSLIFSILVAIPLGIF 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV + SI + G S+P FW GM+LI + SV N+ P G + Sbjct: 120 LAVNKNSITSKVSSVFNYIGVSIPSFWIGMILISIFSVKLNIFPSGGMHTIG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + D V H++LP I LG A+ +S+ E L + Y+ TA Sbjct: 172 --------------NDSIGDLVKHLVLPVITLGLYNTAIFTNYVEASVNEQLKKQYVITA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ ++ H L+N++ +VT++G+ + L+ GA +TE +FSWPG+GR +ID++ Sbjct: 218 RAKGLSEKVILFKHVLKNSLTSLVTILGMSIQKLVTGAFVTEVVFSWPGMGRLMIDSIFS 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ +L A +IL NL+ D+LY +++P+I+ K Sbjct: 278 RDYTVIMAITMLSALFLILGNLVADILYLLIDPKIKSSK 316 >UniRef50_B3QZ99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=B3QZ99_CHLT3 Length = 310 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 187/338 (55%), Gaps = 30/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+ RL I G+ +TF ++++PGDP +M G+R + + ELGLDK Sbjct: 1 MFTFVTHRLLYAIVVIYGVMTITFFLMYILPGDPARLMLGQRA-DVQSIEAIRTELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY ++ G+LG S + V E + RF AT L V ++ +T +GI +GVL Sbjct: 60 PLHEQYFAFLANAAQGNLGRSYATNRDVLETILERFPATALLAVSSLAISTVLGIAIGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK + D+ + AL G S P F+ G+++ + P+SG +S Sbjct: 120 SAVKPYTWLDNLFMLFALLGMSAPGFFAGLLIAWVFGFLLGWFPISGYIS---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + H++LP L PL++ R+TRS+ML+VL +DY+RTA Sbjct: 170 -------------------EGWQHLVLPMTTLALRPLSINARLTRSAMLDVLSQDYVRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ I HALRNA+ PV+T + + LLAG+ E IF+WPG+G IDA+Q+ Sbjct: 211 FAKGVSFRSAIFRHALRNALNPVLTAVSSWLAGLLAGSFFIEFIFNWPGIGLLAIDAIQK 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+P++QG VL A + I++N+ VD+LY +++PR++ Sbjct: 271 LDFPMIQGVVLFTAVIFIIINIAVDMLYALLDPRVKLS 308 >UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RXZ6_9CLOT Length = 339 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 212/336 (63%), Gaps = 3/336 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 L+FI +RL ++ G+ L F MIPGDP + +R + PE A A+ GLD+ Sbjct: 4 LKFIGKRLVYLVVMLFGVATLVFILTKMIPGDPTVANLSQRALNDPEIVAAYRAKYGLDQ 63 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ ++ DLG SM++ PV E + AT+EL + A++ A +G+ G++ Sbjct: 64 PLPVQYILYMKNLLQFDLGTSMRTNKPVLSELARCYPATIELALFAIVIAAILGVLFGII 123 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++R SI D T +++TG S+P FW+ ++++ L P GR+S+ + Sbjct: 124 SAIRRNSILDQTVRAISVTGVSIPSFWFALLVLYFFYYKLKLFPGPGRLSNAFTAPAT-- 181 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG +ID+ + G +DA +H+ILP VL + +I R RS++L+V+ DYIRTA Sbjct: 182 VTGMYVIDSLLEGNIPKALDAASHLILPGTVLAAFTMGLITRTARSNLLDVMSTDYIRTA 241 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+R +II HAL NA++PV+TVIGL +G LL G +L ETIF+WPG+G++ +++ Sbjct: 242 KAKGLSRPGLIIRHALGNALIPVLTVIGLGLGNLLGGMVLVETIFNWPGVGQFAYESVLS 301 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+P + G LL+A +++N +VD+LYG+++PR+R Sbjct: 302 VDFPSIIGVALLIALNYMVINTVVDILYGIIDPRVR 337 >UniRef50_A4XIA7 Nickel-transporting ATPase n=21 Tax=Firmicutes RepID=A4XIA7_CALS8 Length = 323 Score = 356 bits (914), Expect = 8e-97, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 35/338 (10%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++IL+RL + I +TF + MIPG P GE+ + + L + GL++P Sbjct: 19 ARYILKRLLWSAVSLFVIITVTFFLMRMIPGGP---FTGEKTLPEQILKNLNEKYGLNQP 75 Query: 62 MWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY+ Y+ ++HGDLGISM++ V E F + ++G+ A+I + VGIP+G+ Sbjct: 76 IGVQYVKYLKSLLHGDLGISMRNQGRTVNEIIAETFPVSAKIGIIAIIVSLLVGIPLGIW 135 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV +G DH ++ LA ++P F ++L+ + V L P+ G Sbjct: 136 SAVNQGKWQDHLSMVLATIFITIPGFVLAIILMYIFGVKLQLVPIMG------------- 182 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D ILP I L P++ I R+ RSSMLE L +DYIRTA Sbjct: 183 ------------------LDEPRSYILPVITLAAYPISFIARLIRSSMLESLSQDYIRTA 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ VI HAL+N+++PVVT +G + +L G+ + E IFS PG+GR+ +D++ Sbjct: 225 RAKGLSDFVVIYKHALKNSLIPVVTYLGPLIAGVLTGSFVVEKIFSIPGMGRFYVDSISN 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V G + A +I +NL+VD++Y ++PRI+ + Sbjct: 285 RDYSLVMGTTIFYAAFLIFMNLIVDIIYVFIDPRIKLE 322 >UniRef50_A1WN48 Binding-protein-dependent transport systems inner membrane component n=19 Tax=Bacteria RepID=A1WN48_VEREI Length = 317 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 128/335 (38%), Positives = 208/335 (62%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I R G ++ + +L F GDPV ++ G++ + A++ E GLDKP Sbjct: 6 LRYIAARAGGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQA-TAADIARVQKEYGLDKP 64 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ +++ V+ G+LG S+ + PV + R + T L + A+ A +G+P G+++ Sbjct: 65 LPVQFGYWLRAVLQGNLGTSIFLQRPVTQALWERAEPTTLLALMAVAIAALIGVPCGIVS 124 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV RG + D G+A+ G S+P FW G++LI + +V + PVSG + Sbjct: 125 AVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQVFAVSFGWFPVSGYGAP---------- 174 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D F++ + ++LPA VLG + A+I+R TR+SML+VLGEDY+RTAR Sbjct: 175 -------------DAPFMERLHALVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTAR 221 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL+ +V++ HALRNA++P+VTVIGL V ++ GA++TET+F PG+G ++ A+ RR Sbjct: 222 SKGLSESKVVLKHALRNALVPIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRR 281 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYPV+QG +L++A + +L+N +DLLY VV+PR++ Sbjct: 282 DYPVIQGALLVIAAIYVLINFSIDLLYAVVDPRVK 316 >UniRef50_C6WWB7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWB7_METML Length = 340 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 30/352 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 M +++++R+ +IP IGI+L++F +H+ PGD A S E +L LD Sbjct: 1 MFKYLVKRVLWMIPMLIGISLISFFIMHLAPGDITNNEAAFNPKASEESRQKLREMYHLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRI-PVW------------EEFVPRFQATLELGVCA 106 KP+ QY ++ + D G S S PV+ TL + + Sbjct: 61 KPVIVQYGLWLKRMATLDFGNSFASHQKPVFWQTVDADGNVTEGMIQQALPITLMINLLG 120 Query: 107 MIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS 166 + + IP+G++AA K D + G+S+P FW ++L+ + V N P+S Sbjct: 121 LGITLLLAIPLGIIAARKYQGWQDRSITLFNFIGFSIPSFWLSLLLMYWLGVVHNWFPIS 180 Query: 167 GRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRS 226 G S D+ D+ +H+ LP ++ LA I ++ Sbjct: 181 GLHSLNYESMDT----------------WHKIKDSFSHLWLPVVIPSITGLAGITLFVKN 224 Query: 227 SMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFS 286 ML+VL +DYI TARAKGL +V+ HALRNA+LP++T++GL + L+ G+++ ETIF+ Sbjct: 225 GMLDVLQQDYITTARAKGLGERKVVYTHALRNALLPLITIVGLSIPGLIGGSVIAETIFA 284 Query: 287 WPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PG+G+ DA+ RD+PVV G + + + + ++ NLL D+ Y +PR+R Sbjct: 285 IPGMGKLFYDAVLMRDFPVVMGILTIGSALTLIGNLLADVAYAWADPRVRRG 336 >UniRef50_Q1GD19 Binding-protein-dependent transport systems inner membrane component n=141 Tax=Proteobacteria RepID=Q1GD19_SILST Length = 383 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 129/328 (39%), Positives = 196/328 (59%), Gaps = 2/328 (0%) Query: 9 LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLH 68 + + TF+G+ +TF +IP DPV+ + G+R + E++ +GLD+P+ Q++ Sbjct: 58 VIVTFLTFVGLMAITFFIGRVIPIDPVLAVVGDRA-TQEQYDAARIAMGLDQPLVVQFIT 116 Query: 69 YIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSI 128 Y+ V GDLG S+ + PV E+ F ATLE+ +I +G+P+GV AA ++G+ Sbjct: 117 YVGDVFQGDLGHSVSTNRPVAEDLARVFPATLEMATLGIIIGVGMGVPLGVWAAARQGTW 176 Query: 129 FDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLID 188 D AL GYS+P FW G++ +++ GRV D+ + P TG +L+D Sbjct: 177 VDQLIRVFALLGYSVPAFWLGLVGLVVFYAGLGWVGGPGRV-DIFYEGLVEPRTGLLLVD 235 Query: 189 TAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRM 248 + I G+ F A+ H+ILPA +LG LA I RMTRS ML+ LG++YI TAR KG++ Sbjct: 236 SLIVGDWEVFWSALDHLILPATILGFFSLAYIARMTRSFMLDQLGQEYITTARVKGVSEW 295 Query: 249 RVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQG 308 RVI H R +P++TVIGL LL G+++ ET+FSWPG+G +L AL D V G Sbjct: 296 RVIWTHGFRPIRVPLITVIGLSYAALLEGSVMIETVFSWPGIGNYLTVALLNADMNAVLG 355 Query: 309 GVLLVATMIILVNLLVDLLYGVVNPRIR 336 L++ ++ IL+N L D+LY +++PR R Sbjct: 356 ATLVIGSVFILINKLSDVLYRILDPRSR 383 >UniRef50_B3TCI4 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCI4_9ZZZZ Length = 321 Score = 354 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 197/338 (58%), Gaps = 35/338 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA----GERGISPERHAQLLAELGL 58 +++ RR+ ++P ++ I+LL F + PGDP + GE +L ELGL Sbjct: 5 RYLARRVLYLVPVWLAISLLAFGLGALAPGDPAEAIYFETFGEPPNDELALEKLREELGL 64 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + P+ +Y +++ + GDLG S +S +PV + +TL L + +I A+ + P+G Sbjct: 65 NDPLPIRYGRWLFDAVRGDLGESYRSGMPVLPALISPLGSTLILALGGLIAASMIAFPLG 124 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAAVK S+ D A +L G ++P +W M I++ +V+ + PV+G S Sbjct: 125 ILAAVKHNSLIDVVARFFSLIGAAIPSYWLAYMFILVFAVYLHWLPVAGAGS-------- 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 H+ILP LG A++ R+ RSSMLEVLG DYIR Sbjct: 177 -----------------------WRHLILPCFTLGLSGAALLSRLLRSSMLEVLGYDYIR 213 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL+ +VI+ HALRNA++PVVTV+G G LL+GAI+ ET+F+ PGLGR +I+A+ Sbjct: 214 TARAKGLSERKVILQHALRNALIPVVTVMGNMFGLLLSGAIIVETVFARPGLGRLIIEAI 273 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+QG VL T+ +LV+L++DL Y ++P++R Sbjct: 274 SFRDYPVIQGFVLFTGTVFVLVSLIIDLSYTWIDPQVR 311 >UniRef50_C7P3N9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=C7P3N9_HALMD Length = 332 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 193/338 (57%), Gaps = 11/338 (3%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +++ +RRL IP +G+ +TFA + IPGDPV IM G S A + A GLD+P Sbjct: 4 VRYTVRRLLQAIPVLLGVVTITFALANAIPGDPVQIMLGPSP-SQSEIAAIRARYGLDQP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W +Y +Y+ ++ GDLG S+ + V + R AT+ L + + FA +P+GV++ Sbjct: 63 LWVRYANYVAALLAGDLGTSIYYDVAVTRKIGERLPATVLLMLSSYAFAILTAVPLGVIS 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +R + DH + ++L G S P FW G+MLI++ H NL P + V Sbjct: 123 AKRRNRLTDHVSRIVSLIGVSTPSFWIGLMLILVFGFHTNLLPTTNLVMPWADPAGIR-- 180 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 A H++LP I LGT+ +A I R+ RS ML+VL E+Y+ AR Sbjct: 181 --------GAETRLDVLAMAGQHLLLPMITLGTLQMAAITRIERSEMLDVLTEEYVTLAR 232 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G++ ++ HA RNA LPV+T+IGLQ+ + + GA+LTE +F G+GR ++D++ R+ Sbjct: 233 AYGISERTILRKHAFRNAQLPVITIIGLQLSSAIGGAVLTEVVFEINGMGRLIVDSIARQ 292 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYP++ G ++ A + ++ ++ DL Y V+PR+ + + Sbjct: 293 DYPLIMGTTIVFAFVFVVGVVVTDLSYAYVDPRVSYGE 330 >UniRef50_Q53191 Probable peptide ABC transporter permease protein y4tP n=41 Tax=Proteobacteria RepID=Y4TP_RHISN Length = 313 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 190/337 (56%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +ILRRL I + + F + + PGDP ++AG + + A + ELGL++ Sbjct: 1 MGVYILRRLVSTIAVMAMVGIFIFLLLRLAPGDPAAVIAGPTA-TEQMVANIREELGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q++H+ V+ G+ G S+ + +PV + R + T+ L V MI + VG+ GVL Sbjct: 60 PLPVQFVHWASDVLRGNFGASVFTGVPVLQLLSQRLEPTISLSVLTMILSVTVGVSFGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + G D + GYS+P+F G +LI ++ PV G S + Sbjct: 120 AAWRSGGFVDRALATFSAIGYSVPVFVIGYILIYFFAIQTRWLPVQGYTSINQGVAP--- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H+ILP + L +A I R+TR SMLEVL EDY+RTA Sbjct: 177 --------------------WFLHLILPTVTLSVPYIAFIARITRGSMLEVLSEDYMRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG + ++ HAL+NA +P++TVIG+ ++ G +LTET+F+ PG+GR ++DA++ Sbjct: 217 AAKGASPFAMLFHHALKNAGVPILTVIGISFAYMIGGVVLTETVFNVPGIGRLVVDAIKN 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++Q ++L++ + +L+NLLVDL Y +++PRIR+ Sbjct: 277 RDYPIIQTVLVLISGLYVLINLLVDLAYTLIDPRIRY 313 >UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax=Bacteria RepID=Q5SHU7_THET8 Length = 336 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 126/340 (37%), Positives = 191/340 (56%), Gaps = 6/340 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M + +RRL +IP +++ +A + + PGDP+ + + ++ E+ L GLD Sbjct: 1 MFAYTVRRLLQMIPLLFAASVVIYALLALQPGDPLDELRRQNPRMTAEQFEALKRAYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWE-EFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ +Y ++ + GDLG S IP E FV R TL L A+ A V IPVG Sbjct: 61 QPLHIRYFKWLNRALRGDLGYSRTYGIPAAEYVFVQRLPKTLILSGLALTLALVVAIPVG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V +AV++ S+ D+ L+ G+SMP+F+ G++L+ L ++ + P S F Sbjct: 121 VFSAVRQYSLADYAITFLSFVGFSMPVFFLGILLLYLFAI---VLPES-IPGFPRFPTGG 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 P + + + H++LP + L + +A R R+S+LEVL +DYIR Sbjct: 177 VPGVLWEDVRSGAVSLWEFLGQWAWHLVLPVLTLSALQMAEWTRFMRASLLEVLSQDYIR 236 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL V+ HALRNA++P+VT++GL + +L GA +TETIFS+PG+GR + DAL Sbjct: 237 TARAKGLAERVVLYKHALRNALIPIVTLVGLAIPGVLGGATITETIFSYPGMGRAIFDAL 296 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +DY V + +A M L NLL DL Y VV+PRIR+ Sbjct: 297 VEKDYNVAMAALAFLALMTALFNLLADLAYAVVDPRIRYS 336 >UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein AppB n=2 Tax=Clostridiales RepID=C7GGH7_9FIRM Length = 319 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 191/338 (56%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++R+ + IP +GIT++ +A + M G P+ ++ G R +S LGLDK Sbjct: 5 MTKYIIKRILIAIPVLLGITVIDYAIMCMA-GSPLEMLQGPR-VSEAAVQAKAIALGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++HG++G S+K+ PV TL L +++ + + +P G+ Sbjct: 63 PFYVQYFVWLGQLLHGNMGYSIKNYQPVAAMITSHLGPTLLLMGVSLLVSILLAVPAGIY 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+T V L+ G S+P F+ M+LI L +V P G + Sbjct: 123 SAIHQYSKGDYTVVTLSFLGSSIPGFFLAMLLIYLFTVKLGWLPSGGMTTL--------- 173 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D HM++P IVL +R RS++LE+L +DY+RTA Sbjct: 174 ------------GTSGGAADVAVHMVMPVIVLAVSMAGTNIRYIRSAVLEILQQDYLRTA 221 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P+VTVIG+++ L G+I+ E +FSWPGLG + A+ Sbjct: 222 RAKGIGHFLVINKHALRNALVPIVTVIGMEIPVLFGGSIIVEQVFSWPGLGLMTMSAITN 281 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G LL A +++L NLL D+LY VV+P I+ + Sbjct: 282 RDYPVIMGVCLLSAIVVLLGNLLTDILYAVVDPTIKLQ 319 >UniRef50_UPI0001C36066 binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36066 Length = 315 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 122/339 (35%), Positives = 189/339 (55%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I +R+ ++IP G+TLL F ++ GDP + G + E +L E GLD Sbjct: 1 MIKYIGKRILMMIPVMFGVTLLIFTLLYFANGDPARNLLGAEA-TEEEVQELRDEWGLDD 59 Query: 61 PMWQQYLHYIWGVMHGD-LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P +Y +Y+ ++ LG+S ++ V E V RF+ + + V + I A G +GV Sbjct: 60 PYLVRYGNYLKQLLVDRSLGVSYVNKKEVSTEIVARFKVSFAIAVESTIIAVLFGTVMGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA + + D+ ++ AL G SMP FW G++L ++ ++ P SG Sbjct: 120 LAATHQNTWVDNASMVAALVGASMPGFWIGLVLSIVFALKLGWLPSSG------------ 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G F +++ LP I L + R TRSSMLEV+ +DYI T Sbjct: 168 ---------------WGTFKESL----LPCISLAIGAAGGLARQTRSSMLEVIRQDYIVT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKG+++ +V VHALRNA++PVVT G + L+ G ++TET+FS PGLG +++ A+ Sbjct: 209 AKAKGVSKFKVTYVHALRNALIPVVTAAGGTLSWLMGGVVVTETVFSIPGLGMYMVTAIN 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +RDYPV+QG VL +A LV L VD+LY ++PRI+ + Sbjct: 269 QRDYPVIQGSVLYIALTFSLVMLAVDILYAYIDPRIKAR 307 >UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5Y8_GEMAT Length = 306 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 145/338 (42%), Positives = 199/338 (58%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+LRR L IPT G+ ++ F +++ PGDPV M GER +L AEL LD Sbjct: 1 MTFFLLRRALLSIPTLFGVLVVVFLLLYVAPGDPVQAMVGERA-DAATIERLRAELRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ HY G++ GDLG S + P+ + RF TL+L AM+ AT +G+ +G L Sbjct: 60 PLPSQFAHYASGILTGDLGRSYITNRPIVTDIAERFPRTLQLAGAAMLLATLLGVSIGAL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+ FD A+ G S P++W G++LI+ +V P SG Sbjct: 120 AAVRPHGWFDRVALATTYLGISFPVYWIGLLLILFFAVTLRWFPASGYG----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + ++LPA+ LG+ +A + R+TRSSMLEVLG D++RTA Sbjct: 169 --------------------RLEFLVLPALALGSRSIAYLARVTRSSMLEVLGADFVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V++ HALRNA++PVVTVIGL G L G+ILTETIFSWPG+GR+++ A+ R Sbjct: 209 RAKGLAERTVVVRHALRNALMPVVTVIGLDFGAYLTGSILTETIFSWPGIGRYVVMAISR 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P VQG VL ++ + +LVNLL DL YG ++PR R Sbjct: 269 RDLPAVQGTVLFLSVVFVLVNLLTDLAYGRIDPRARRA 306 >UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=25 Tax=Actinomycetales RepID=C7MR18_SACVD Length = 341 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 138/341 (40%), Positives = 217/341 (63%), Gaps = 6/341 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ RR+ ++ +++L FA++ +PG PV + G+RG + E AQL ELGLD+ Sbjct: 1 MLRYAFRRVLQLVLVLFVLSVLLFAWLRALPGGPVSALLGDRG-TAESRAQLREELGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM--KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P++ QY ++ + G+ G S+ +P E F RF AT+EL A++ A IP+G Sbjct: 60 PIFVQYFSFLGRALTGNFGNSIGVAPGMPALEVFSERFPATIELSFMAIVLALITAIPLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LAA +RG D+ + +L G S+PIF++ +L + ++ P GR + + D+ Sbjct: 120 YLAARRRGGWLDNAGILSSLVGISVPIFFFAFLLKWIFAIELGWLPTGGRQTVGI---DA 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +TGF ++D + E DA+ H++LP+I L +IP AVI R+TR+S+L+VL EDY+R Sbjct: 177 TRVTGFFVLDGILTQEWDAAWDALVHLLLPSIALASIPFAVIFRITRASVLDVLDEDYVR 236 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR+KGL + + H LRN++LPVVT +GLQ G+LL+GA+LTET+F+W G+G L Sbjct: 237 TARSKGLAKRVIRDRHILRNSLLPVVTTVGLQTGSLLSGAVLTETVFAWHGIGEALALGF 296 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +R+D+PV+Q ++ A +L+NLLVDL Y +++PRIR + Sbjct: 297 ERKDFPVLQVVIIAGAASYVLINLLVDLSYALIDPRIRTAQ 337 >UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11 Tax=Proteobacteria RepID=A1UTK3_BARBK Length = 357 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 132/331 (39%), Positives = 192/331 (58%), Gaps = 2/331 (0%) Query: 6 LRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQ 65 L+ + + T +G+ +TF ++P DPV+ + G+ IS E + + +LGLD+P+ Q Sbjct: 29 LKLIISIFVTLLGLVTITFFIGRLLPLDPVIAVLGDN-ISQEAYDIMFHKLGLDQPLIVQ 87 Query: 66 YLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKR 125 Y +Y+ + D G S+ S V + + F ATLEL A+I +T+VGIP+GV AA+ R Sbjct: 88 YWNYLQNIFVFDFGDSLISGRSVLSDIIRVFPATLELATIAIIISTSVGIPLGVFAAMYR 147 Query: 126 GSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFM 185 S D+ L YS P FW G+M +++ GR+ D V+ TGF Sbjct: 148 NSCIDYFVRIFTLISYSTPTFWLGLMALLVFYAKLGWIGGPGRI-DFVYEYSFEATTGFF 206 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 L DTA G+ F +A +H+I+PA++L +A I RM R M+E + ++YI TAR KGL Sbjct: 207 LWDTARQGQWEAFGNAFSHIIMPALILAFGGMAYISRMVRGFMIEQINQEYIITARVKGL 266 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 + R + HA RNA + +TV+GL LL GA+LTET+F+WPG GR+L +AL D Sbjct: 267 SWARTVWSHAFRNASVQTITVVGLSYAFLLEGAVLTETVFAWPGFGRYLTNALLAGDMNA 326 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 V G LLV + I +NLL DLLY + +PR R Sbjct: 327 VLGCTLLVGCLFISINLLSDLLYHIFDPRTR 357 >UniRef50_B9ZIL3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIL3_NATMA Length = 316 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 121/337 (35%), Positives = 181/337 (53%), Gaps = 24/337 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++ LRR +IP GI L F +H +PGDPV + G E L+A G D+P Sbjct: 4 LRYALRRFVQIIPVLFGIVTLMFVMMHALPGDPVRLYLGTEPG-QELADDLIASYGFDRP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QY Y+ + GDLG S PV + R + TL + + + A + I +G+ Sbjct: 63 LHEQYFDYLVRLGQGDLGQSFVYNRPVSDLIWERMEPTLVVMGLSYLVALPMAIGLGIYG 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + DH + L G S P FW +MLI +V+ H L P SG S + Sbjct: 123 AARHNEAGDHASRFAGLAGISTPNFWLALMLIYVVTYHLELLPASGYTSPFIDP------ 176 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 ++++ +I+P I L T A+++RMTRSSM+E L DYI TAR Sbjct: 177 -----------------VESLTLLIMPVITLATAQTALLMRMTRSSMIEELRADYIETAR 219 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G+ +V+I H+ RNA+LP+VT++GLQV TLL G+++ E IF+ PGLGR D+L + Sbjct: 220 AYGIPERKVLIRHSFRNALLPLVTIVGLQVSTLLGGSVIVEEIFAIPGLGRLFFDSLIDQ 279 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V G L +T+ ++ +L D+ Y ++PRI++ Sbjct: 280 DYSVAVGVTLFFSTLFLIGVVLTDIAYAYIDPRIKYD 316 >UniRef50_B2SC63 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=B2SC63_BRUA1 Length = 337 Score = 351 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 130/337 (38%), Positives = 205/337 (60%), Gaps = 3/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLD 59 M + +RL + +GI + FA + DP+ + E+ ++ PE A A+ GLD Sbjct: 1 MSNYFFKRLIAMPFLILGIVTIAFALTTITKCDPLTSIVAEQQMNNPEVVAAAKAKWGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 + + ++Y Y+ + GD+G S ++ PV + + R AT+EL V AMI + +GI +G+ Sbjct: 61 RSLPERYFIYLKNLAVGDMGTSFVTKRPVGTDLMARLPATMELVVVAMILGSVIGITLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA R S+ DH A AL G S+P+FW G+ ++ + SV + + P GR+ + Sbjct: 121 LAAYYRDSVIDHLARLFALFGSSLPVFWLGLAVLFVFSVQFEILPGPGRLDPR--MTPPA 178 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TGFM ID+ + G+ F DA+AH+ILP++VLG I R+ R++ML+V+G ++I T Sbjct: 179 AVTGFMTIDSLLAGDGAAFRDALAHLILPSLVLGWAVAGTISRLVRANMLDVIGREFILT 238 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG +RV+ HALRN ++PV+TVI L+ GA+LTETIF+WPGLG + ++A + Sbjct: 239 ARAKGAGELRVVFRHALRNILVPVLTVISYSFAYLITGAVLTETIFAWPGLGSYAVEAAR 298 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+P + G ++ M ++ NLL D+ Y + NPR+R Sbjct: 299 ALDFPAIIGVTIVGGIMFLMTNLLTDIAYVLANPRVR 335 >UniRef50_A8F7V7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F7V7_THELT Length = 317 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 205/338 (60%), Gaps = 24/338 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDK 60 +++RR+ IPT + + + F +H++PGD V +M G + ++ E+ +L + GLDK Sbjct: 3 FGYLIRRIITSIPTVLFVAFVVFIIIHLVPGDVVDMMLGTQNYLTQEQIQELYKQYGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ ++ ++ D G S++S V V RF TLEL + +M FAT +GIP+G++ Sbjct: 63 PLIVQFGVWLKNLVTLDFGTSLRSGKKVAALIVDRFPVTLELSILSMFFATIIGIPLGII 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K+ S D + L G S P FW G +LI++ + + + G V Sbjct: 123 AAIKKNSFTDGLVRVIGLVGLSSPSFWVGAILIVIFAGLFKGFNIFGYV----------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +F+ + M LP++ LG + A I+RMTRSSML+VL ++YI+TA Sbjct: 172 ------------RMQEDFLKNLQVMFLPSLTLGLMLSAQIMRMTRSSMLDVLQQEYIKTA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG++ ++I HAL+NA++P++T+ G+Q+G LLAG I+ E +F+ PGLGR L+ A+ Sbjct: 220 KAKGVSYSKLIGKHALKNALIPIITLSGIQLGYLLAGTIVIENMFALPGLGRLLLQAVNE 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q V+ +A +I+ +N++VD +Y +++PR+ K Sbjct: 280 RDYPVIQFVVMFIALIIVALNIVVDFIYTLIDPRVELK 317 >UniRef50_B8J041 Binding-protein-dependent transport systems inner membrane component n=11 Tax=Bacteria RepID=B8J041_DESDA Length = 344 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 182/337 (54%), Gaps = 18/337 (5%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPMW 63 + R+ ++ GITL++F +H+ PG P + ++ +L A GLD+P+ Sbjct: 21 VARKTLWMLLVLWGITLISFWVIHLAPGSPTDMETTLNPLAGEAARQRLEALYGLDRPLH 80 Query: 64 QQYLHYIWGVMHGDLGISMK-SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ ++H D G SM PV + + R T+ + V AM+ + IPVG+++A Sbjct: 81 VQYADWLLRLLHFDFGNSMSADSRPVLTKIMERLPLTVGMNVTAMVLTLLIAIPVGIISA 140 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +R S+ D + L G++MP FW ++L++L + P+SG S Sbjct: 141 CRRNSLLDRSVTVLVFLGFAMPSFWLALLLMLLFGIELQWLPISGLTSMHYEQLSL---- 196 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G F D H+ LP +V LA + R R+ MLEVL +DYI TARA Sbjct: 197 ------------WGKFCDLAKHLALPILVYTVGGLAGMSRYMRACMLEVLQQDYILTARA 244 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL +I HALRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ RD Sbjct: 245 KGLGEKAIIWRHALRNALLPVITLLGLSVPGLIGGSVIIESIFALPGLGQLFYAAVMARD 304 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 Y ++ G ++L A + + NLL D+ YG+ +PRIR K Sbjct: 305 YTMIMGNLVLGAVLTLFGNLLADICYGLADPRIRSAK 341 >UniRef50_Q46ER9 Oligopeptide ABC transporter, permease protein n=2 Tax=Methanosarcina RepID=Q46ER9_METBF Length = 314 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 194/345 (56%), Gaps = 38/345 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG------ERGISPERHAQLLA 54 M +++L+R ++ T + LTF +HMIPG+ I+ E + E+ Q Sbjct: 1 MHRYLLKRFASMLITLVVACALTFFLMHMIPGETTEIILKHTFIGLEETATEEQLMQFSE 60 Query: 55 ELGLDKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAV 113 + L+ P++ Q+ ++ +++GD+G S PV R AT+ L +M+ + Sbjct: 61 KYNLNDPLYIQFFEWLKNFLLNGDIGTSYVYHKPVIYLLKLRLPATILLATSSMLITVVL 120 Query: 114 GIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMV 173 GI +GV +A+K+ + DH ++L G SMP FW G++LI+L SV L P + S Sbjct: 121 GISLGVYSALKQNKLSDHILRFISLFGVSMPGFWIGLLLILLFSVKLKLIPATDYGS--- 177 Query: 174 FLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 + ++ LPA+ L + +A ++R+TR+SMLE LG Sbjct: 178 ----------------------------LENLFLPALALSSHSIASVMRITRTSMLETLG 209 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 +DYI+ A AKGL+ +++ HA++NA+LPV+TV+G Q+G LL G+I+ E +F+WPG+G Sbjct: 210 QDYIKFAVAKGLSTRTIVLRHAMKNALLPVITVLGFQMGHLLGGSIVIEQVFTWPGIGSL 269 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L++++ RD PVVQG V+ + M +++N LVD+ Y ++ RI++ Sbjct: 270 LVNSISARDIPVVQGCVMCIVAMFLMINFLVDIFYTYLDARIKYD 314 >UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNV7_MEIRU Length = 335 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 143/338 (42%), Positives = 213/338 (63%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + RRL V+ G+T TF +++P DP + G+ E+ + GLDK Sbjct: 1 MLSYFFRRLFFVVFVVWGVTFATFFIANVVPIDPAIAALGDNAR-EEQIKEFRERYGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+WQQYL Y+ ++ GDLG S++++ PV E+ F ATLEL V A + +G+P G+L Sbjct: 60 PIWQQYLIYMGRLLSGDLGNSLRTQRPVAEDLKEFFPATLELSVAAFLVTLLLGVPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++ D T LAL G + P+F+ ++L +++ +L PV GR+ F Sbjct: 120 AALRQNKATDVTVRILALIGGATPVFFLAVLLQYVLARELDLLPVQGRLDGFTF--PPPR 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG M +D + + F+D++ H++LPA VLG A++ RMTR++MLEVL +DYIRTA Sbjct: 178 ITGLMGLDALLARDWAAFLDSLRHLVLPAFVLGLFSAAILARMTRATMLEVLSQDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ V+ HAL+NA LPV+T++G +G LL+GA+LTETIFSWPG+GR++ + Sbjct: 238 RAKGVPGRAVVFRHALKNASLPVLTLLGGLLGGLLSGAVLTETIFSWPGIGRYVTQSATS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+P V G LLV + L+NL+VDLLY ++PRIR+ Sbjct: 298 LDFPAVMGVTLLVGLVYALINLIVDLLYAFLDPRIRYA 335 >UniRef50_D1WR30 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Streptomyces RepID=D1WR30_9ACTO Length = 315 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 140/336 (41%), Positives = 191/336 (56%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRR ++P +G+T+ TF +IPGD + G S L +LGLD+ Sbjct: 1 MLTFTLRRALHMLPVILGVTIATFGLGQIIPGDQASALLGPTA-SEADRQALREDLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y Y+ + GDLG S+ PV E R TL L A++ A VG+ +G Sbjct: 60 PAVSRYFTYLGSLFDGDLGRSLSFGRPVSEVLSDRLLNTLLLSGTAIVLAAVVGVAIGTW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS D + L S+P FW+G++LI++ S+ + P +G S Sbjct: 120 AAQKPGSHRDRSLTVGVLFFNSVPSFWFGLVLIIVFSLQLRMLPATGMTSIG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +D AHM+LP I L LAVI RMTRSS+LEV+G DY+RTA Sbjct: 172 --------------GGGALDVAAHMVLPVITLAAWSLAVIARMTRSSVLEVIGNDYVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+ RVI+ H L NAM V+TVIGLQ G LL+GA+LTET+FSWPG+G L A+ Sbjct: 218 RSRGVGEFRVIVRHVLPNAMPSVITVIGLQAGFLLSGAVLTETVFSWPGIGLALHQAISA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD P+VQGG+L++A +L+N LVD+L NP+I+ Sbjct: 278 RDIPLVQGGILVIAIAFVLINFLVDVLQAYFNPKIK 313 >UniRef50_D1CEI4 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bacteria RepID=D1CEI4_THET1 Length = 307 Score = 349 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI+ RL +IP + +TF +H PG P + G + ISPE + GLDK Sbjct: 1 MLRFIVNRLLWMIPVLWLVGTVTFFLMHAAPGSPWDVRVGGKNISPELEKSFNRKYGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QYL Y V+ D G S + V + + F + +G+ A + A +GI +G+ Sbjct: 61 PLVVQYLIYWRNVLKLDFGQSYSNESQTVVQRIMAGFPYSARIGLYAWVMALVLGISLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + D+ ++ A GY++P F G+ L+++ +V PV Sbjct: 121 IAALKQNTWIDYVSLFFATVGYTIPSFVLGIFLLIIFAVKLGWVPV-------------- 166 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ILP++ LG A I R+TR+S+LE++ +DYIRT Sbjct: 167 ------------------LFAGWKSYILPSVALGLSTAAFIARLTRASVLEIIRQDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL + + H +RNA++PVVT+ G + +L+ G I+ E +F+ PG+G I ++ Sbjct: 209 ARAKGLPPRIINLRHIVRNALIPVVTISGPALASLITGTIIIENVFNVPGMGYLFIQSIS 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G L I++ NLLVDL YG+V+PRI+ Sbjct: 269 ARDYPVIMGTTLFYTFFIVIGNLLVDLTYGLVDPRIKTS 307 >UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n=18 Tax=Bacteria RepID=Q30Y57_DESDG Length = 343 Score = 349 bits (898), Expect = 7e-95, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 187/335 (55%), Gaps = 18/335 (5%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDKPMWQQ 65 RRL V+ F GITL++FA +H+ PG P + + +L GLD+P+ Q Sbjct: 22 RRLLWVMAVFWGITLISFAVIHLAPGSPTDLQTTLNPQAGADARMRLEKLYGLDQPLHVQ 81 Query: 66 YLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVK 124 Y ++ ++ D G+SM PVW++ R T+ + + +M+ + +PVG+ +A Sbjct: 82 YGQWVNRLIRLDFGMSMSGDMRPVWDKISERLPLTVGMNLASMLLTLLIALPVGIASAYW 141 Query: 125 RGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGF 184 +G FD + L G++MP FW +++++L +H P+SG S Sbjct: 142 QGRWFDRASTVLVFIGFAMPGFWLALLMMLLFGIHLGWLPISGITS-------------- 187 Query: 185 MLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKG 244 +D A G +D AH+ +P + LA + R RSSMLEVL +DYI TARAKG Sbjct: 188 --LDYAQLSTTGKILDVAAHLAMPLFIYTFGSLAGMSRFMRSSMLEVLRQDYILTARAKG 245 Query: 245 LTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYP 304 L VI HALRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ RDYP Sbjct: 246 LGLGTVIFRHALRNALLPVITILGLSVPGLIGGSVIIESIFALPGLGQLFYGAVMARDYP 305 Query: 305 VVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ++ G ++L A + + NLL D+ YG+ +PRIR + Sbjct: 306 LIMGNLVLGAVLTLAGNLLADVCYGLADPRIRSAR 340 >UniRef50_B9LRN3 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Halobacteriaceae RepID=B9LRN3_HALLT Length = 339 Score = 349 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 129/334 (38%), Positives = 199/334 (59%), Gaps = 2/334 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+L+R + G+ F + PG+PV +A S E AQ+ A+LGLD+P+ Sbjct: 5 RFLLKRGIQGVLVVWGVVTAVFLLRFITPGNPVTFVAPLDA-SAELRAQIAADLGLDQPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 + QY+ YI G++ GD+G S R AT+EL V A I A + IP+GV++A Sbjct: 64 YIQYVDYIGGLLQGDMGYSYLRGTEASTIVFARVPATVELAVAATIVAIVIAIPLGVISA 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGR-VSDMVFLDDSNPL 181 +R D+ A +L G S P FW G+MLI+++SV ++L P S R + + Sbjct: 124 TRRREPADYGATLFSLVGISTPNFWLGIMLILVLSVQFDLFPTSRRPIGFFETFTFLVTV 183 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + + + H+ LPA+ LGT A++ R+TRS M+E LG+ Y+R AR Sbjct: 184 ENGLSVPMNVGAFLDGLRTWLWHITLPAVTLGTYFTALVTRLTRSGMIEELGQPYVRAAR 243 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL + HAL+N ++P+VTV+GLQ+GTL+ GA++TE +FSWPGLG +IDA+ R Sbjct: 244 AKGLPESLIQYKHALQNTLIPIVTVLGLQLGTLIGGAVITEAVFSWPGLGTLVIDAINVR 303 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 D+P++QG ++++ T +L+N+ VD LY +NPR+ Sbjct: 304 DWPLIQGSLIVIGTGFVLINIFVDSLYAYLNPRV 337 >UniRef50_A4F975 ABC-transport protein, membrane component n=2 Tax=Actinomycetales RepID=A4F975_SACEN Length = 319 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 129/335 (38%), Positives = 195/335 (58%), Gaps = 24/335 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 + R+ + T + ++L+ FA + +PGDP + +AG Q+ GLD+P+ Sbjct: 5 YAFSRILQSLVTLVLVSLVVFAGLRALPGDPAVALAGPEA-DDAAIEQIRHSYGLDQPLP 63 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY ++ + GD G S + +P+ E + R TLEL V +++FA VG+ GV++AV Sbjct: 64 VQYATWLGRAVRGDFGESATTGLPIGEIILGRIPVTLELAVLSLLFAALVGLAAGVVSAV 123 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 +RG D GL+L G S+P FW G+M +++ +V + P SG V Sbjct: 124 RRGGPLDWLGNGLSLFGLSIPNFWLGLMCVLVFAVWLGVLPASGFVPFTESP-------- 175 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + + M+LPA VLG+ AV++R RSSML+ LG DY+RTARAK Sbjct: 176 ---------------WENLERMVLPAFVLGSGLAAVLMRQMRSSMLDSLGSDYVRTARAK 220 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G RV+ VH LRN+++ V+T++GLQ+G L++GA++TE IF PG G+ ++D++ RD+ Sbjct: 221 GAGEWRVVGVHGLRNSLITVMTILGLQLGALISGAVVTEQIFVLPGFGKLMVDSVFTRDF 280 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PV+Q VL+ A I VNL VDLLY VV+PRIR + Sbjct: 281 PVIQAAVLVTAAGYIAVNLAVDLLYSVVDPRIRVR 315 >UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWH0_9BACE Length = 331 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 126/339 (37%), Positives = 191/339 (56%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+ +RL + T ++++ F HM GDP I+ G + E+ +L L LD+ Sbjct: 14 MAKFLGKRLLSALVTIFLLSIIIFTISHMSKGDPAQIILGAEA-TEEQITELRHSLKLDR 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY+ +I+G + GDLG S + PV E R +L L + A I A V IP GV Sbjct: 73 PVVEQYIDWIFGAVRGDLGDSYYTGEPVLAEVASRLVPSLRLAIMAEILAVIVAIPAGVF 132 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +G D+ +L G S+P F ++LI++ V + PVSG + + Sbjct: 133 AAKNKGRGLDYMLSTTSLLGLSIPNFLMSLILILVFGVAFKALPVSGYRTLKSGVGVF-- 190 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ILP + LG +++RMTRSSMLEV+ DYI+TA Sbjct: 191 ---------------------LKYSILPVLALGLGQAGILMRMTRSSMLEVMNTDYIKTA 229 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG ++ HALRNA +P++T IG GTL AG + ETIF+ PG+G+ ++ ++ R Sbjct: 230 KAKGAKSTVILFKHALRNAFIPILTAIGQSFGTLFAGTAIVETIFNIPGVGQLVVTSITR 289 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY ++QG VL+++ M I++NL +D+LYGVV+PRIR K Sbjct: 290 RDYAMIQGVVLIISIMWIIINLALDILYGVVDPRIRLAK 328 >UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligopeptide transport n=6 Tax=Firmicutes RepID=Q8DPF3_STRR6 Length = 331 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 197/338 (58%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 M ++IL+++ +IP + I+ L F + + P DP+ M S E+ +L +LGL+ Sbjct: 16 MKKYILKKVLFMIPMLLIISFLVFIALDLTPADPLTYMVSPDMASSAEQIEKLRQQLGLN 75 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +Y ++W ++HGD G S+ + P+ + AT EL ++I +T VGI +GV Sbjct: 76 DPVLVRYGRWLWQLLHGDFGYSIVNGNPISKIVGQALPATFELAFVSLIISTIVGIVIGV 135 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+ I D+ A LA+ G ++P F++G++++ ++ + P+ GR + F Sbjct: 136 ISAVKQNGIIDNVARFLAVIGTAIPQFFFGILILNFFAIQLRILPIGGRFASGDF----- 190 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 FI+ V H+ILP + + +A ++R TR+SML+V DY++T Sbjct: 191 -----------------TFINRVEHLILPVMAMSIALVAALMRYTRNSMLDVFNADYVKT 233 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+ +V H RNAM P++ ++ ++ L+ G+++ E++FSWPG+G ++ ++ Sbjct: 234 ARAKGVPEWKVYFKHIFRNAMRPILVLLIFRLPMLIGGSVIIESVFSWPGIGSIILSSVT 293 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+ L+++ +++ +LLVD++ +++PRIR+ Sbjct: 294 AGDYPVIMITTLMISVVVLFASLLVDIMAAILDPRIRY 331 >UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2F3_DEIDV Length = 314 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 135/338 (39%), Positives = 198/338 (58%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL +PT + +TL+ FA V+++PGDP ++ GE +PE A+L LGLD+ Sbjct: 1 MLVFALRRLLSTLPTLLIVTLVVFAMVNLLPGDPARLLLGEEA-TPEALAELRRSLGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QYL ++ V+ D G S+K V + T++L +M+ A + IP G+L Sbjct: 60 PLPEQYLRWLMDVIQLDFGTSVKDNTTVTSLVAEKLPTTMQLAGFSMLIALVIAIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A++RG+ D +AL+G S+P F+ G++LI + S+ P SG VS + Sbjct: 120 GALRRGTWVDQVLTLMALSGISLPNFFLGILLIYVFSIRLAWIPASGYVSFFEDPGKNLL 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L PA+ LG AV+ R R S++E L +DY+RTA Sbjct: 180 LLLL-----------------------PAVTLGVHSAAVLARYLRGSLIETLFQDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ RV HALRNA++PVVT GLQ+G LL GA++TE IFS PG GR L+DA+ Sbjct: 217 HAKGVSGPRVTFKHALRNALIPVVTAFGLQLGGLLGGAVITEQIFSVPGFGRLLVDAVFT 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QG VL+ A + +V+ LVD++Y ++PRIR++ Sbjct: 277 RDLPVIQGVVLVSAIAVFIVSFLVDMMYAALDPRIRYQ 314 >UniRef50_B3TC47 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC47_9ZZZZ Length = 340 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 119/337 (35%), Positives = 196/337 (58%), Gaps = 6/337 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 ++ R+ + + ++TF +IP D + + AG + E ++ L +P+ Sbjct: 9 NYVFNRIIQLPIIIFALLIVTFTLSRIIPADVLWVWAGPFA-TKESKDAIIEYYHLAEPI 67 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 + Q+ +Y ++ DLG S + P+ E RF T++L A+ + G+ G+++A Sbjct: 68 YVQFWYYFQDLLRFDLGNSPITHRPITLELAIRFPRTIQLTFFALFLSVVGGLSFGIISA 127 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + R + DH AL G SMP+FW+G++L + + + + P G +S + +T Sbjct: 128 IYRNKLPDHFTRLFALAGLSMPLFWFGLLLQLFLHFKYPIFPAIGVLSGEA----APIVT 183 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 F LID+ + G F DA H+ILP+ L +A+I R+TRS MLEVLG+DYIR AR+ Sbjct: 184 RFDLIDSLLAGRLDIFWDAFMHLILPSFCLSYPYMAIITRITRSEMLEVLGQDYIRAARS 243 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI-DALQRR 301 KGL+ ++ HALRN ++P +T+IG+ G LL G++L ET+F +PG+G +++ A+++ Sbjct: 244 KGLSDRIIMFRHALRNGIIPSLTLIGMTFGFLLGGSVLIETVFVYPGMGHYVVTQAIKQL 303 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYP + G L+ + ILVNL VDLLYG ++PRIR + Sbjct: 304 DYPAIMGVTLVAGLVFILVNLAVDLLYGYIDPRIRFR 340 >UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFM8_9ACTN Length = 338 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 195/337 (57%), Gaps = 2/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F L+RL + + +TL+ F +IP +P ++ G + PE A++ AELGLD+ Sbjct: 1 MLRFTLKRLLTAVVVLLILTLVVFLMTRLIPSNPAIVYVGPKA-PPEVIARVTAELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY Y+ G+ GD G S+ ++ PV E R ATLEL AM A G+ +GVL Sbjct: 60 PIFVQYFEYLGGLFTGDWGNSLSTKRPVLLELATRLPATLELIAAAMAIAALGGVTLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMV-FLDDSN 179 A + G I D L++ G SMP FW G++L + + L P +G+ S+ + + + Sbjct: 120 AVRRPGRILDGAIRFLSIGGVSMPAFWLGLLLQLFFVGNLKLLPATGQFSNALEYTNPIT 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 P+T F L D+ I G F D + H+ILPAI L PL ++ RM RS+MLEVLG+D+I T Sbjct: 180 PVTNFALFDSLITGNWAAFGDGLQHLILPAITLAAYPLGLMARMVRSAMLEVLGQDHIFT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA GL V AL+NA+ VTV GL + L G E +F+WPG+G+++ A+ Sbjct: 240 ARAYGLPERVVHWKLALKNALPSTVTVFGLSIAYALTGTFFVEVVFNWPGIGQFITAAMV 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP + LL A +L N +VD++ ++PR+R Sbjct: 300 AVDYPTIMAVTLLGAAAYLLSNFVVDVVQAKIDPRVR 336 >UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT family n=4 Tax=Proteobacteria RepID=Q0K3A7_RALEH Length = 318 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 141/341 (41%), Positives = 210/341 (61%), Gaps = 26/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH--AQLLAELGL 58 M ++LRRL +IPT + +L+ F V M+PGD V +M + IS + L+ LG+ Sbjct: 1 MSAYVLRRLLALIPTLLFASLIVFTIVRMVPGDVVDLMLSQNDISADTRTREDLVRALGM 60 Query: 59 DKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 D+PMWQQY+H++ G V+ GDLG S+ PV R AT LGV A++ A +V +P+ Sbjct: 61 DRPMWQQYVHWVGGIVLRGDLGQSLWQGEPVLSMVTARIPATFSLGVIALVVALSVALPI 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GVL+A+++ S D+ A ++ ++P FW G M+++ SV W +P + V Sbjct: 121 GVLSAIRQDSAADYIARSFSILMLAIPSFWLGTMVMVFPSVWWGWSPEARYVPFHEDP-- 178 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + V +M++PAIVLG A+ +RMTR+ MLEVL +DYI Sbjct: 179 ---------------------VQHVRNMLIPAIVLGMALSAITMRMTRTMMLEVLRQDYI 217 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTA AKGL+ V++ HALRNA++PVVT+IGLQ L+ GA++ E IF+ PG+G L+DA Sbjct: 218 RTAWAKGLSERLVVLRHALRNALIPVVTLIGLQAPLLIGGAVIIEQIFALPGMGLLLLDA 277 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +RDYPV+ G L+V ++L+NLLVDL YG+ +P++RH+ Sbjct: 278 VHQRDYPVITGVFLVVGVAVMLINLLVDLSYGLFDPKVRHR 318 >UniRef50_C9RY28 Binding-protein-dependent transport systems inner membrane component n=211 Tax=Firmicutes RepID=C9RY28_GEOSY Length = 339 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 35/337 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ L+R +I T I LTF + ++PG P+ + ++PE+ A +L E GLDK Sbjct: 31 MARYTLQRFVYMIITLFIIATLTFFLMKLLPGSPLQN---QEKLTPEQKALILKEYGLDK 87 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ Y+ ++ GDLG+S + PV E R + +LG A++F T VG+ +G+ Sbjct: 88 PVPVQYIQYLGNLLKGDLGVSFQYDNRPVTELISDRIGPSAQLGFQAIVFGTIVGLILGI 147 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA++ D+TA +A+ G S+P F G L ++V PV Sbjct: 148 VAAIRHNHWEDYTATVIAVLGASIPSFVLGGFLQYFIAVKLQWLPV-------------- 193 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 F + + ILP + L +A I R R+ MLEVL DYI T Sbjct: 194 -----------------AFWEGFKYTILPTLALSVGVIASIARFMRTEMLEVLSSDYILT 236 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+++ VII HA+RN+++PV+T++G L+ G ++ E +F+ PGLG + +++ Sbjct: 237 ARAKGISQAGVIIKHAIRNSLIPVITILGPMTVNLMTGTLVIEKLFAVPGLGEQFVRSIE 296 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYPV+ G L + ++IL +VD+LYGVV+PRIR Sbjct: 297 LNDYPVIMGTTLFYSALLILAVFIVDVLYGVVDPRIR 333 >UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane component n=9 Tax=Proteobacteria RepID=C0Q387_SALPC Length = 321 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 181/338 (53%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FILRR IPT + ++F + + PG P GER + PE A + A+ L+ Sbjct: 16 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGERALPPEVLANIEAKYHLND 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ + HGD G S K + V + F + +LG A + A +G+ GV Sbjct: 73 PIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGAAAFLLAVIIGVSAGV 132 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + +D+T +G A+TG +P F +L+M+ ++ P G Sbjct: 133 IAALKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQWLPGGGWNGG-------- 184 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A+ MILP + L +A I R+TR SM+EVL ++IRT Sbjct: 185 ---------------------ALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R+I HAL+ A+LPV++ +G ++ G+++ ETI+ PG+G+ ++ Sbjct: 224 ARAKGLPMRRIIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V +LV + IL N +VD+LY V++P+IR+ Sbjct: 284 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 321 >UniRef50_D1CA61 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA61_SPHTD Length = 311 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 123/335 (36%), Positives = 190/335 (56%), Gaps = 27/335 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+LRRL ++P G+T + F +H++PGDP IM G R +PE AQL LGLD+ Sbjct: 1 MSRFVLRRLIQMVPVVFGLTAVIFFMIHLVPGDPAAIMLGTRA-TPENVAQLRRNLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ + G LG S+ R PV + + TL L ++ A + +P+ L Sbjct: 60 PLLVQYMFFLRNLATGSLGDSIFYREPVLDLILDHLPTTLMLATSTIMLAVIITVPLATL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ R + D G L G +MP FW G+ L++L++V + + P G Sbjct: 120 AALHRDRLADQVVRGFLLVGLAMPSFWVGINLLLLLTVRYRIFPAGGF------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ LPA+ + AV+VR RSS+++ L D++RTA Sbjct: 168 --------------GDGFFDHLRHLFLPALTIALSISAVLVRNLRSSLIDTLTADHVRTA 213 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V H LRN+ + VT++GL +G L+ G ++ E +F+ PGLG+ L+ ++ Sbjct: 214 RAKGLSSRAVFFWHVLRNSAMSTVTILGLNLGYLMGGTVIIEQVFALPGLGQLLLTSIFG 273 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYPVVQG L+ A ++ILVNL+ DL+Y ++PR+ Sbjct: 274 RDYPVVQGITLVYAVLVILVNLITDLVYAALDPRV 308 >UniRef50_UPI0000E87C5E peptide ABC transporter, permease protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C5E Length = 339 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 30/352 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 ML+++++R+ + P IGI+L++F +H+ PGD + S E +L LD Sbjct: 1 MLKYLIKRILWMFPMLIGISLISFFIMHLAPGDVTSNESSFNPKASEESRQKLRELYNLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRI-PVW------------EEFVPRFQATLELGVCA 106 KP+ QY ++ ++ D G S S PV TL + + Sbjct: 61 KPVMVQYGLWLKRIVKLDFGRSFSSHQRPVLWEEKDKNGNITKGLIQESLPITLLINLLG 120 Query: 107 MIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS 166 + ++ I +G +A+K+ + D + G+++P FW ++L+ V P+S Sbjct: 121 IFIIFSISIVLGTASAIKQNTWVDRSITLFVFVGFAIPGFWLALLLMYWTGVANQWLPIS 180 Query: 167 GRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRS 226 G S D T +D + H++LP V LA I R+ Sbjct: 181 GLHSQGYLSLDLFSQT----------------LDLLKHLVLPVFVSSLSGLAGISLYVRN 224 Query: 227 SMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFS 286 ML+VL +D+I TAR+KGL+ RVI VHAL+NA+LP++T++GL + L+ G+++ E+IF+ Sbjct: 225 GMLDVLHQDFITTARSKGLSEKRVIFVHALKNAILPLITIVGLSIPGLIGGSVIAESIFA 284 Query: 287 WPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PG+G+ D++ RD+PV+ G + + + + + NLL DL Y +PR+R Sbjct: 285 IPGMGKLFYDSVLMRDFPVIMGILTIGSVLTLFGNLLADLGYAWADPRVRKG 336 >UniRef50_C8Q8F0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pantoea sp. At-9b RepID=C8Q8F0_9ENTR Length = 306 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 195/338 (57%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ +++ + G++++ F + +PGDP +MAG E + LGLD+ Sbjct: 1 MKAYVAKKVLSLPLIIFGVSIIVFIAIRALPGDPARLMAGPEA-PQEAVDNMRIRLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ + +HG+LG+S++S+ PV E R TL L A + A A+G+P G+ Sbjct: 60 PLPLQYVKFAADALHGNLGMSLQSQRPVLTEISERLPYTLSLAALAYLLAIAIGVPAGMT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A+ R I D + L + G S+ FW ++ + +V P+ G Sbjct: 120 GAIYRQRIPDQVVMVLTIAGASIANFWLALLAMNYFAVQLGWLPLLG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D+ + I+P + L +P+A+I RMTRSSML+VL +DYIRTA Sbjct: 167 ------------------ADSWRNYIMPTVTLAILPMAMIARMTRSSMLDVLSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+ + HALRNA++P+VT++ L G+L+ GA++TE++F+WPG+GR L+D+++ Sbjct: 209 KAKGLSARSIHWKHALRNALIPIVTIVALNFGSLIGGAVVTESVFNWPGIGRLLVDSVRY 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+QG L+ T ++L+NL+ ++L G++NP+IR Sbjct: 269 RDYPVIQGVTLVAVTGVVLMNLVGEILIGLLNPKIRFD 306 >UniRef50_A4J1I5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1I5_DESRM Length = 336 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 128/337 (37%), Positives = 194/337 (57%), Gaps = 3/337 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FIL+RLGL + +G+ +TF +IP DP G R +P++ ELGLD+ Sbjct: 1 MRSFILKRLGLGVLVLLGVITVTFFITRVIPSDPAAKWVGPRA-TPQQIEAARVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + GD G S++S PV EE AT+EL V + I A VGIP+GVL Sbjct: 60 PLFIQFGKYVTDLSQGDFGKSLRSHQPVAEELKAYLPATIELVVLSTIIAIFVGIPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS-DMVFLDDSN 179 +A ++ + DH + ++ S+P FW G+ L +L H P+ ++S D+ L + Sbjct: 120 SARRKDQLVDHFSRIFSVGAVSLPTFWVGLFLQLLFYRHLGFLPLGDQLSTDIKLLYEVP 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TGF+L D+ I G D + HMILP I + PL ++ RMTRS++LE+L EDYI Sbjct: 180 HITGFLLFDSFITGNFVILQDVLIHMILPGITIALYPLGLVARMTRSALLEILNEDYISA 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR+ GL V+ +AL+N++ P VTV+ L +G L L E IFSWPG+G ++ A+ Sbjct: 240 ARSYGLPEGLVLWKYALKNSLGPTVTVVTLSIGYTLVNTFLIEAIFSWPGIGSYISSAVI 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP + G + A + +NL+ D + ++PR+R Sbjct: 300 SLDYPAIMGVTIFSAIAYVFLNLVADFIIA-LDPRVR 335 >UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 Tax=Clostridium acetobutylicum RepID=Q97GJ1_CLOAB Length = 317 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 187/338 (55%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I++RL +IP I + + + + PGD M ISP+ A++ + LD+ Sbjct: 1 MIRYIVKRLFFMIPIIIITSFIIYMIFTLAPGDIATSM----NISPKEKAEMRHKYHLDE 56 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY +++G HGDLG S K PV + L + I A + IP+G + Sbjct: 57 PKVIQYCKWLYGASHGDLGRSYKLNQPVKSVINKYIWNSFYLQFASFILAILIAIPIGAI 116 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ SIFD +L G SMP F+ G++L+ + N+ PV G + Sbjct: 117 SAIRKHSIFDSGFTVFSLVGISMPTFFLGLILMKWFAADLNIFPVEGMTATGENFHGIKR 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D + HM+LP VL + A ++R R+SMLEV+ +DYI TA Sbjct: 177 -----------------LLDILYHMVLPCAVLTIVNAATLIRYVRASMLEVINKDYIITA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL VI HAL+NAM+P+VT+ G+ + L GAI+TE IF WPG+G+ +DA+ + Sbjct: 220 KAKGLNEKVVIYKHALKNAMIPLVTIFGISIANLFTGAIVTEEIFGWPGIGKLSLDAVLQ 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G ++V + + NL D+LY V++PRI++K Sbjct: 280 RDYPLLMGINMIVVILTFVGNLAADVLYAVIDPRIKYK 317 >UniRef50_C0G1A9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=C0G1A9_NATMA Length = 326 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 177/336 (52%), Gaps = 14/336 (4%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +++RR ++ TF L F M+PGDP + + G++PE+ Q +AELGL++P+ Sbjct: 5 AYVVRRCLQLVVTFWAFFTLLFVLFRMMPGDPTSMFIMD-GMTPEQREQRIAELGLNEPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY+ YI ++ GD G S PV RF T+ L A+IFA +GI G L Sbjct: 64 HVQYIEYIRQLLTGDFGQSFIYNDPVTSIIAVRFMNTIVLMATALIFAYVIGITFGALMG 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 R S F+ + + L S P FW G++L+ + P SG + L Sbjct: 124 WWRDSRFERGGIVVTLVARSSPEFWVGIVLLSVFVFWLGWFPSSGMRTTGGELGGG---- 179 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 + + +D + H+ LPA+ LA + RS+ML+VL D+I +A Sbjct: 180 ---------FIDRYGSLDFLRHLFLPALTGAIAYLATPTLLMRSTMLDVLNADFIEIKKA 230 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +GL V+ HA RN++LP+VTV + GT + G+++ ET+F+WPG+GR ++ A+ D Sbjct: 231 EGLPERTVLYKHAARNSILPIVTVAAIATGTAMGGSVVIETVFNWPGMGREMVSAVNNND 290 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP+ L+ +++I++N + DL Y ++PR+ ++ Sbjct: 291 YPLAMAAFFLMGSVVIIMNFVADLAYVYLDPRVEYE 326 >UniRef50_UPI0001C31351 binding-protein-dependent transport systems inner membrane component n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31351 Length = 320 Score = 346 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 186/337 (55%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML F++RR I + ++L F + ++PGDP++ G +PE QL E GL+ Sbjct: 1 MLGFVIRRAATSILMLVAASVLVFVILRLLPGDPIITRLGATAGANPEAIDQLRREAGLE 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QQY ++ GV+ GD G S S+ V E R ATLEL A+ F+ + +P V Sbjct: 61 DPILQQYFDWVGGVLSGDFGQSYFSQFSVTELISRRIGATLELTGVAIFFSLLIAVPAAV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +++RGS FD + G ++P F G++LI++ +V P G V Sbjct: 121 FCSLRRGSWFDRLVTTGSTVGMALPQFLLGILLILVFAVELRWLPARGYVPF-------- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + + + V MILPA+ L +I+R R+SM+EVL YIRT Sbjct: 173 ---------------NEDPAENVKRMILPALTLAIAAAPLILRYLRASMIEVLDSSYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A KG+ RV++ HALRNA++P +T++G+ VG L G ++ E +F PGLG ++++ Sbjct: 218 AEGKGVPHRRVVVSHALRNALIPGLTMLGMIVGYTLGGVVIVEYVFGIPGLGSLAVESVF 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +RDY V+Q VLL++ + I L+VD+LYGV++PR+R Sbjct: 278 KRDYAVLQSVVLLISALFIFTTLVVDVLYGVLDPRLR 314 >UniRef50_A9EE52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EE52_9RHOB Length = 328 Score = 346 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 132/332 (39%), Positives = 187/332 (56%), Gaps = 18/332 (5%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPER-HAQLLAELGLDKPMW 63 I+ RL + + I LL F + + PGDP +MAG+ G + E+ QL ++ GLD+P+ Sbjct: 10 IVLRLAKAVAVILAIVLLNFILIRLAPGDPASVMAGQAGAADEKFMLQLRSQFGLDQPLP 69 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q YI G+ GDLG S + V E + R ATL L A A GI +G LA + Sbjct: 70 VQAWDYIAGIFQGDLGYSYRQGTAVSELILDRLPATLLLTGTAFAIALLGGIAMGSLAGL 129 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 G D ++L Y+ P+FW G+M I+L SV+ + P G L Sbjct: 130 NAGRPIDFVISVVSLIFYATPLFWVGLMSILLFSVYLDWLPAFGMTQVGSRLT------- 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 F+D H++LPA LG +AV RMTR+S+LEV +D++RTARA Sbjct: 183 ----------SWAYFLDVARHLVLPATTLGLFYMAVYARMTRASILEVRDQDFVRTARAM 232 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL R R++ H LRNA+LP++T+ G+Q G L+ GAILTET+F WPG+GR DAL +RDY Sbjct: 233 GLPRRRIVRSHILRNALLPIITLAGIQAGQLVGGAILTETVFGWPGIGRLAFDALLQRDY 292 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 V+ G + + M++ N++ DLLY V++PRI Sbjct: 293 QVLLGVFFVTSIMVVAFNIITDLLYRVIDPRI 324 >UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Tax=Proteobacteria RepID=Q48E35_PSE14 Length = 315 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 112/333 (33%), Positives = 188/333 (56%), Gaps = 27/333 (8%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +FIL+R ++P GI+L+TF V IPGDP I+ G R +P+ A + A+ GLD+P+ Sbjct: 7 RFILQRPLQLLPVLFGISLVTFILVRSIPGDPARILLGARS-TPQALANIRAQYGLDEPL 65 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 W QY++++ ++ GD+G S+ +I V + V R + T+ L +++ A + +P+ +AA Sbjct: 66 WTQYVYFMKNLLQGDMGKSLLYKIDVLKLIVTRLEPTVFLVCGSVLLALLIAVPLATVAA 125 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 GS D+ TG MP FW G+MLI+L SV PVSG SD Sbjct: 126 RNNGSWGDNLIRVFTTTGLGMPAFWLGIMLILLFSVQLGWFPVSGYGSD----------- 174 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ++D V HM+LP + + AV++R R+SML L D++ ARA Sbjct: 175 ---------------WLDKVHHMVLPCLTIALALSAVLIRNLRASMLMELQADHVTAARA 219 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G++ V H L N+++P + ++ + +G L++G ++ E++F+ PG+G+ L+ + RD Sbjct: 220 RGVSEGAVFRRHVLPNSLVPSINLLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFSRD 279 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 Y VVQG +++A ++VN L D+ ++PR+ Sbjct: 280 YMVVQGVAMVLACATVIVNFLADVATVAIDPRV 312 >UniRef50_A8S2V4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S2V4_9CLOT Length = 310 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 181/337 (53%), Gaps = 33/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + + + +TF +H+IPG P + +R + + Q+ + GL+ Sbjct: 3 MAKYIIKRLVAGVLSLFILITITFFLMHVIPGGPFSP-SEQRNVPEKILEQISEKYGLND 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ Y+ ++HGD+G S K + V E F + ++G + A A GIP+G+ Sbjct: 62 PLPAQYVRYLGNLLHGDMGTSFKKQDTTVNELIANGFPVSAKVGALGIAVALAAGIPLGI 121 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AAVKRG + D ++ LA G S+P F ++++ + W + P G S Sbjct: 122 VAAVKRGKLADGASMVLATIGVSVPSFVLCVLMMYVFCEKWKIFPSYGLTS--------- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H +LP + +A I R+ RSSMLE + +DYIRT Sbjct: 173 ----------------------WKHYVLPVFCMAFSQVAYITRLMRSSMLETMRQDYIRT 210 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 R+KG+ VI +AL+N++LPVVT +G V TLL G + E +FS PGLGR+ I A+ Sbjct: 211 ERSKGVPEWEVISKYALKNSILPVVTYVGPLVATLLTGTFIIEKLFSIPGLGRYFISAIT 270 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY V G + + MII NL+VD++Y V++PR++ Sbjct: 271 DRDYSVTLGLTVFLGVMIIGCNLIVDIMYAVIDPRVK 307 >UniRef50_A3IB67 Dipeptide transport system permease protein dppB n=1 Tax=Bacillus sp. B14905 RepID=A3IB67_9BACI Length = 294 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 135/326 (41%), Positives = 204/326 (62%), Gaps = 32/326 (9%) Query: 12 VIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIW 71 ++ T IG+++L F +H+IPGDPV + G+ S E ++ LGLD+P++ QY+ YI Sbjct: 1 MVITLIGVSILVFLMMHLIPGDPVTYILGDFA-SEEAIVEMKKTLGLDQPLFIQYIDYIK 59 Query: 72 GVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDH 131 V+ G+LG S + + V EE V RF T++L + ++I +GI +G+LAAVK+ +IFD Sbjct: 60 NVLQGNLGTSYITGLTVGEEIVARFPITVQLALYSLIIGAVIGILMGILAAVKQNTIFDQ 119 Query: 132 TAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAI 191 A+ ++L G S P FW + LI + S +N+ P+SG Sbjct: 120 LAMVISLIGISAPGFWIALFLIWMFSYQFNIFPISGY----------------------- 156 Query: 192 WGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVI 251 +ILP+I LG I RMTRSSMLEV+ +D++RTA+AKGL + +I Sbjct: 157 --------QGFYSLILPSITLGLGSAGNIARMTRSSMLEVIKQDFMRTAQAKGLAMIPMI 208 Query: 252 IVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVL 311 HAL+NAM+PV+T+IGLQ G LLAGA++ ET+F+ PGLG + I+A+ +RD P VQG VL Sbjct: 209 FKHALQNAMIPVITLIGLQFGFLLAGAVVIETVFALPGLGSFSIEAITKRDLPTVQGLVL 268 Query: 312 LVATMIILVNLLVDLLYGVVNPRIRH 337 +A + I+ N++VDL+Y +++PRI++ Sbjct: 269 FMAFLFIITNMIVDLVYSLIDPRIKY 294 >UniRef50_B8F5L4 ABC-type oligopeptide transport system, periplasmic component n=16 Tax=Proteobacteria RepID=B8F5L4_HAEPS Length = 307 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 180/339 (53%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI++R+ IPT + +F + + PG P ER PE A + A+ L++ Sbjct: 1 MLKFIIKRILEAIPTLFILITFSFFLMRLAPGSP---FTSERAYPPEVIANIEAKYHLNE 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+++QY Y+ + GD G S K + V + F + +LG+ A FA +G+ G Sbjct: 58 PLYKQYFIYLENLAQGDFGPSFKYKDQTVNDLIASAFPVSFKLGIVAFCFAVTLGLLAGT 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ S +D+ + A+TG MP F + +L+++ +++ P G Sbjct: 118 VAALKQNSRWDYFIMSFAMTGIIMPSFVFAPLLVLIFAIYLKWLPAGGWNGGQ------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + +M+LP + L +A I R+TR SM+EVL ++IRT Sbjct: 171 ----------------------LYYMVLPVLSLTIAYVAGIARITRGSMIEVLHSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL ++I HALR AMLPV++ + ++ G+++ E++F PG+G+ ++ Sbjct: 209 ARAKGLPMGKIIFKHALRPAMLPVISYLAPAFVGIITGSMVIESVFGLPGIGQLFVNGAL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V +LV T+ I N +VD+LY V++P+IR+ Sbjct: 269 NRDYSLVLSLTILVGTLTIFFNAVVDILYAVIDPKIRYS 307 >UniRef50_Q5E4F5 Oligopeptide transport system permease protein OppB n=88 Tax=Proteobacteria RepID=Q5E4F5_VIBF1 Length = 306 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 179/338 (52%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI++R+ IPT + + ++F + PG+P ER + PE A + A+ GLDK Sbjct: 1 MFQFIIKRILEAIPTMLVLITISFFLMRFAPGNPFST---ERPLPPEVMANINAKYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+++QY Y+ ++ GD G S K + V E + ++G A IF +G+ VG Sbjct: 58 PVFEQYTTYLGNILQGDFGPSFKYQDYTVNELVEAALPVSAKVGFFAFIFTVVLGVTVGT 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+++ + D+T + A+ G MP F LI L S+ P G Sbjct: 118 LAALRQNTWLDYTIMSTAMVGVVMPSFVLAPALIYLFSIELGWFPAGGWHDG-------- 169 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + +M LP + + + +A R+TR SM+E L ++IRT Sbjct: 170 ---------------------SFKYMFLPILGMSFLYVATFARITRGSMIETLNSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +II HAL+ AMLPVV+ +G ++ G+++ ETIF PG+G+ ++A Sbjct: 209 ARAKGLSYRYIIIKHALKPAMLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAF 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V G +L+ + IL N +VD+L +++P+IR+ Sbjct: 269 NRDYSLVMGVTILIGFLFILFNAIVDVLLAIIDPKIRY 306 >UniRef50_Q211A7 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Rhodopseudomonas palustris RepID=Q211A7_RHOPB Length = 340 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 124/328 (37%), Positives = 188/328 (57%), Gaps = 18/328 (5%) Query: 9 LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKPMWQQYL 67 + + I F VH PGDP ++AG+ G + AQL AE GLDKP Q Sbjct: 24 FARFVAVVLVIATFNFVLVHAAPGDPAQVIAGQSGSADAKLLAQLRAEYGLDKPYPVQLA 83 Query: 68 HYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGS 127 Y+ ++ DLG S + + V R ATL L A A A G+ +G LA ++ G Sbjct: 84 TYLKRIVTLDLGYSYRQQRSVLSLLGERLPATLLLTCTAFFLALAAGVLLGTLAGMRAGK 143 Query: 128 IFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLI 187 D ++L Y+MP+FW G+ML++L SV + P G V+ V + + Sbjct: 144 WSDTALTIVSLLLYAMPVFWLGLMLVLLFSVKLDWLPAFGYVTIGVEMTAFERM------ 197 Query: 188 DTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTR 247 D +H++LPA+ L + +A+ R+ RSS++E+ +D+I+TARAKGL + Sbjct: 198 -----------RDVASHLVLPAVSLAAVHMAIYARLMRSSVIELAHQDFIKTARAKGLKQ 246 Query: 248 MRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQ 307 R++ H LRNA+LPVVTV G+Q G L+ GA++ ET+F+WPGLGR DA+ +RDYPV+ Sbjct: 247 GRIVAHHILRNAILPVVTVAGMQAGALVGGAVVIETVFAWPGLGRLTYDAVLQRDYPVML 306 Query: 308 GGVLLVATMIILVNLLVDLLYGVVNPRI 335 G L+++ ++IL+NL+ D +Y +V+PR+ Sbjct: 307 GIFLMMSVIVILLNLVTDAIYRLVDPRV 334 >UniRef50_D1C3Y0 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Bacteria RepID=D1C3Y0_SPHTD Length = 315 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 142/338 (42%), Positives = 208/338 (61%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++LRRL +IP +GI+++TFA + +IPGD V ++ G ER +L GLD+ Sbjct: 1 MLRYVLRRLVALIPVLLGISIVTFALIRLIPGDVVDMILGTEVAGGERADELRRLFGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QYL + V+ GDLG SM++ PV +E + R T+EL +++FA + IP G++ Sbjct: 61 PLYKQYLLWAGDVVRGDLGHSMRTGKPVLDEILGRLPTTIELAAFSVVFALLIAIPAGII 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K G+ + L L G S+P FW G +LI++ S + P + VS Sbjct: 121 AALKTGTRTEAGVQTLGLLGLSVPNFWLGTLLILVTSRYLGWFPAATYVSFTDDP----- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 W F ILP I LG A+ +RMTRSS+LEVL +YI TA Sbjct: 176 -----------WRNIQIF-------ILPGIALGAALAAITMRMTRSSLLEVLNREYINTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +VI+ HA++NAM+PVVTV+G+Q+G LL GAI+ E +F+ PG+GR IDA+Q+ Sbjct: 218 RAKGVAERQVILRHAMKNAMIPVVTVVGIQIGRLLGGAIIIEQVFNLPGIGRLAIDAIQQ 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG VL +++NLLVDLLY ++PRIR+ Sbjct: 278 RDYTMIQGVVLFTTFAFVVINLLVDLLYAFIDPRIRYS 315 >UniRef50_A1SP55 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nocardioides sp. JS614 RepID=A1SP55_NOCSJ Length = 321 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 119/336 (35%), Positives = 186/336 (55%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ RL IP I I+++ F + + PGDP ++ G PE + E+ LD Sbjct: 1 MLRMATSRLLSSIPVLILISIVAFTLLRLAPGDPALLSVGLEA-PPEALERARQEMRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY ++ V+ D G S + PV E R TL+L A++F A+G+P+GV+ Sbjct: 60 PVWAQYWAWVTDVVRFDFGTSYTDKSPVTEVIAHRLPTTLQLAAVALLFIVAIGLPLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++ D +L G S+P F + L++ P P Sbjct: 120 SALRANRFTDQLIRVGSLAGISVPNFVVALFLVLSFGW---WFP------------GIMP 164 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GF+ + + ++++ + +LPA+ L + ++ R+ RSSMLEVLG+DY+ A Sbjct: 165 YQGFVSL-------GEDPVESLKYTVLPAVALAAPQIGLVARLARSSMLEVLGQDYVSAA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ +I LRNA+LPVVTV+G+Q G LL G+++ ET+F PGLGR L+++ Sbjct: 218 RAMGVRERVIIWKDTLRNALLPVVTVLGVQAGFLLGGSVVVETVFGIPGLGRLLVESFTI 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV G ++ +A + + +N++VDLLYGV+NPRIR Sbjct: 278 RDYPVTIGVMMFIAAVFVFINIIVDLLYGVINPRIR 313 >UniRef50_A1WJE8 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Proteobacteria RepID=A1WJE8_VEREI Length = 315 Score = 344 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 195/336 (58%), Gaps = 24/336 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +I RRL +P + + ++ FA + + PGDP I+AG+ + + ++ +GLDK Sbjct: 4 LSYIGRRLLATLPVMLMVAVVVFAMLRLTPGDPAAILAGDDA-TGAQLEKVRQTMGLDKS 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ +M GDLG+S+ S PV + R TL L +C + V +P+GV+A Sbjct: 63 IPAQFASWMGQLMRGDLGVSLLSGTPVRQMIGIRMGPTLALALCTIALTIMVALPLGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +RG D + L+ G+S+P F +LI L S+ PV G Sbjct: 123 ASQRGRWLDRLVMTLSALGFSVPTFVVAYLLIYLFSMKMGWFPVQGYKPLA--------- 173 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 ++LPA+ L I +A++ R+TRSS+LEV+GED+IRT R Sbjct: 174 --------------EGIWPFAQRLVLPALALSGIYIALVARITRSSILEVMGEDFIRTVR 219 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG +++ HALRNA + +VT+IG+ V +L+ G ++TE++F+ PGLGR +++A+ R Sbjct: 220 AKGAKDSTILLRHALRNAAVSIVTIIGIGVASLITGVVVTESVFNLPGLGRLVVEAVLAR 279 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+QG +LL + IL+NLLVD+LY V++PRIR+ Sbjct: 280 DYPVIQGLILLFSFSYILINLLVDVLYTVLDPRIRY 315 >UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease protein n=5 Tax=Bacteria RepID=Q73N80_TREDE Length = 317 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 184/337 (54%), Gaps = 22/337 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+++++RL + IPTF+GIT T+ + M G P+ + I+ + LGLD+P Sbjct: 3 LKYVIKRLLIAIPTFLGITFFTYLILSMA-GSPLDAYLADPRITVMELERKRNSLGLDQP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ + DLG S +S+ PV + R T L ++I + + IP+G+ + Sbjct: 62 IIIQYFIWLKNFFNMDLGFSFQSQRPVTQMIFERMGITALLAGSSLILSLLISIPLGIFS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A K S DH + + + P F+ G++LI ++ L P G Sbjct: 122 ASKPNSFRDHASSAFSFILVATPNFFMGLILIYFCAIKLRLLPSGGLFD----------- 170 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + HMILP +VL + +R R SMLEVL EDYI TAR Sbjct: 171 ----------ASGKKTTLMLLKHMILPTLVLSFQQIGSWMRYMRGSMLEVLQEDYITTAR 220 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL R ++ HAL+N+++P++TV+G+ + +L+ GA++TE +F WPG+G ++ A+ + Sbjct: 221 AKGLKRNQIYYTHALKNSLIPIITVVGMSIPSLVGGAVVTEQVFGWPGIGTLMVQAINAK 280 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+ G + ++ +++ NL+ DL YG+V+PRI +K Sbjct: 281 DYPVIMGITVNISIAVLIANLITDLAYGLVDPRISYK 317 >UniRef50_Q67T60 Oligopeptide ABC transporter permease protein n=2 Tax=Symbiobacterium thermophilum RepID=Q67T60_SYMTH Length = 328 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 121/342 (35%), Positives = 186/342 (54%), Gaps = 18/342 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG---ISPERHAQLLAELG 57 M +++ +R+ +IP I +TLL+F + + PG P ++ P++ +L + G Sbjct: 1 MARYLTKRILNMIPLLIIVTLLSFGIMQLAPGGPEYVILSAEADAMSDPQKVEELREKWG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L+ P+ QY+ ++ ++ GD G S R+PV E T+ L + A+IF + IP+ Sbjct: 61 LNDPIPVQYMRWVGNMLKGDFGKSYYYRLPVKEVLASALPNTIRLNLFALIFIYGISIPL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN-LTPVSGRVSDMVFLD 176 GV++AV++ S D A G + P FW +LI V++ L P +G + + L+ Sbjct: 121 GVISAVRQYSKADMLVTATAFAGQAAPSFWVASLLIWGVAMKSGGLIPTNGIATPGITLE 180 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 LT F D +M+LP +V+ L + R RSSMLEVL EDY Sbjct: 181 THGWLT--------------VFTDRAKYMLLPLVVIVFGGLTGLTRYMRSSMLEVLREDY 226 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +RTARAKGL VI HALRNA+LP++ V G + L+ G+++ E IFSWPG+GR Sbjct: 227 VRTARAKGLAEKVVIYKHALRNALLPILAVSGGLLSGLVGGSVIIENIFSWPGIGRVAWQ 286 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ RDY V +LL A + ++ LLVD+ Y V+PRI++ Sbjct: 287 AVNNRDYNVSMSVMLLSAVLTMIGYLLVDIAYVWVDPRIKYD 328 >UniRef50_B9ZIB5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIB5_NATMA Length = 325 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 122/337 (36%), Positives = 195/337 (57%), Gaps = 15/337 (4%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRR G ++ T I + FA M+PGDP + + + P++ L+ + GLD P Sbjct: 4 VNYALRRTGQLVLTIWAIATMLFAMFRMMPGDP-TVFLVDEQMDPDQRQALIEQYGLDAP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QY+ ++ ++ DLG+S SR PV + TL L + A++ A G+ GV+A Sbjct: 63 LHEQYIEFMIQIVTLDLGLSFHSRRPVRDVIAIYLPNTLILMLTALVLAYIFGVTFGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RGS + V LAL S P FW G++++ + + ++ P+SG S + P Sbjct: 123 AWARGSGREKLLVVLALVQRSFPSFWVGLVVLWIFGAYMDVIPMSGMTS-----REHRPE 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + FM+I + ID + H+I PA VL + + + R++MLEVL ED+I R Sbjct: 178 SFFMMITS---------IDFLWHLIAPASVLAFYSMGYPLLLMRNNMLEVLTEDFIDVCR 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +V+ HA RNA+LPVVT + VG + G++L ET+F WPG+GR +++A+ RR Sbjct: 229 AKGLSERKVMFKHAARNALLPVVTAGAVAVGYAVGGSVLIETVFGWPGIGREMVNAVLRR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV QG +L+A+ ++ +N DLLY ++PR+ + Sbjct: 289 DYPVAQGTFILLASTVVFMNFFADLLYSWLDPRVTYD 325 >UniRef50_B9L4I6 Oligopeptide transport system permease protein AppB n=2 Tax=Bacteria RepID=B9L4I6_THERP Length = 314 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 145/336 (43%), Positives = 220/336 (65%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F++RR+ ++ ++G+T+L F+ +H+ PGDP MI+ G + + E A+L ELGLD+ Sbjct: 1 MVAFLIRRILGLVLVWLGVTILVFSIMHLAPGDPAMIILGPKA-TAESLARLRHELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ V+ GD G S++ + V E RF+AT L A + A A+G+ GV+ Sbjct: 60 PLPVQYLRWLGNVLQGDFGRSLQLKRDVSELLWTRFRATALLATAATVIAVAIGLTAGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++ S++D A+ LAL G+ +P+FW G++L + ++ + PVSG + Sbjct: 120 SATRQYSVWDRAAMLLALLGFCLPVFWLGLILQIGLAYRLPVFPVSGMNAPGQ------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+D + H++LPA+ LG P AVI RMTRSS+LEV+ +D++RTA Sbjct: 173 ---------------SGFLDTLHHLVLPAVTLGIGPAAVIARMTRSSVLEVIRQDFVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ H LRNA++PV+T++GLQVG L GA+L E +FSWPGLG +++ + Sbjct: 218 RAKGLAERVVILRHVLRNALIPVLTIVGLQVGYLFGGAVLVEMVFSWPGLGLLMVNGILA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+PVVQG VL+VAT +LVNLLVD+LY +V+PR+R Sbjct: 278 RDFPVVQGAVLVVATTYVLVNLLVDVLYTLVDPRVR 313 >UniRef50_C7RF10 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Bacteria RepID=C7RF10_ANAPD Length = 320 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 29/343 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-----ISPERHAQLLAE 55 M ++I++R+ +IP + I+++ FAF +PGDP+ M G E + L A Sbjct: 1 MFRYIVKRIINLIPVALIISIMLFAFSKAMPGDPIKAMMPTTGRMTKQEQEELYQTLQAR 60 Query: 56 LGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGI 115 GLDK + +QY+ ++ + GDLG S + R PV E + T+ L + + I + + + Sbjct: 61 YGLDKSLPEQYVRWLGRTLKGDLGESTRVRRPVSEYLSEPLKNTIFLNIGSTILSFVLSV 120 Query: 116 PVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL 175 +G+ +A +G +FD T L L G S+P+F+ G++LI + + P +G Sbjct: 121 LIGIRSATHKGGVFDKTFQTLTLVGLSIPVFFIGLILIFVFAFRLGWFPANGMP------ 174 Query: 176 DDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 + F + V +++LP L LA + R R+SML+ L +D Sbjct: 175 ------------------RENTFGEWVKYLVLPTATLTIGSLASLSRYVRNSMLDALDQD 216 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 YIRTAR+KGL VI HA RNA++PVVT + V + +G+ +TE IFS+ G+G LI Sbjct: 217 YIRTARSKGLKEKTVIYSHAFRNALIPVVTALTWAVLGMFSGSAITERIFSFRGIGNELI 276 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ +DY V+ + A + +L NLL+D+ Y +V+PR++ + Sbjct: 277 MAVMAQDYNVILALSMFYAVLTLLGNLLMDVAYALVDPRVQLE 319 >UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=11 Tax=Actinomycetales RepID=C7MV56_SACVD Length = 348 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 196/337 (58%), Gaps = 20/337 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++F+ +LG + +F + +L F MIPGDPV M +R SPE+ A+L LG+DKP Sbjct: 32 VRFLASKLGGALASFSLVVVLGFLLFRMIPGDPVATMTRDRPTSPEQLAELRERLGVDKP 91 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 M +Q++ Y+ G++ GDLG S PV + R TL L A + A A+G+ +GV A Sbjct: 92 MHEQFIDYVLGLLRGDLGTSYMYNRPVADMIGERLWPTLLLVGTATLLAVALGLWLGVRA 151 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + GS FD + G+ALT +SMP FW G++L++ L P G S ++ + Sbjct: 152 AWRHGSAFDRVSTGVALTLWSMPQFWLGLLLLI---ATQGLFPSRGMRSPVIPENPV--- 205 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +D H++LP + L + A + + RSS+LE +G DY+ TAR Sbjct: 206 --------------AQVLDVAHHLVLPCVTLLAVIYAQYMLVMRSSLLEEMGADYLTTAR 251 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V HA+ NA+LP VT++ LQ G +++G + ET+FSWPGLG +AL+ Sbjct: 252 AKGLRDDLVRRRHAVPNALLPTVTLVFLQFGMVVSGTVTVETVFSWPGLGLLTYEALRGP 311 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P++QG +++A+ ++++NLL +LLY V++PR+R Sbjct: 312 DLPLLQGVFVVLASSVLVMNLLAELLYRVLDPRVRES 348 >UniRef50_C6A3B4 ABC-type dipeptide transport system, permease component n=22 Tax=cellular organisms RepID=C6A3B4_THESM Length = 339 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 125/337 (37%), Positives = 212/337 (62%), Gaps = 6/337 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 Q+I+ R ++IPT + + + F F+ ++PG+PV+ + G + ISPE+ L+ GLDKP+ Sbjct: 7 QYIVIRGLMIIPTILILYTIVFIFLRILPGNPVLAVVGTKNISPEQLQHLMEMAGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKS--RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY Y+W ++HGD G+++ PV E RF ATLEL + + +G+ G + Sbjct: 67 YVQYFDYLWKMVHGDFGVTLAFPMGKPVVEYLKLRFPATLELTLFGFSISVLLGLLTGTI 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ + D ++ Y++ I W+GMML + +H++L P SGR+ + L Sbjct: 127 AAAKKSTKIDTGMRLYSIIAYTLFIPWFGMMLQYVFGIHFHLLPTSGRIDPGIEL---QR 183 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ++D+ + G F AV H+ILPA LG + R+ R++M++VL +D+IR+ Sbjct: 184 ITGLYVLDSLLTGNWEAFSSAVRHVILPATTLGIVLSGAYTRLVRNNMVDVLSQDFIRSY 243 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A+G+ +V+ +AL+NA +PVVT++GLQ LL GA+LTET F+WPG+G +++D + Sbjct: 244 YARGVKDWKVMW-YALKNAFIPVVTLMGLQFAILLGGAVLTETTFNWPGMGTFIVDRIDY 302 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +QG V+ A + L++L+VD++Y +++PR+++ Sbjct: 303 RDYNAIQGAVVFFAFFVGLISLIVDIVYALLDPRVKY 339 >UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ4_9RHOB Length = 342 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 125/337 (37%), Positives = 194/337 (57%), Gaps = 4/337 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+ +LRRLG+ + IG+++L FA +IPGDP I G + E+ + E+ LD+P Sbjct: 5 LRILLRRLGISVIVLIGVSMLIFAIARIIPGDPARIALGPNA-TAEQVVMIRTEMHLDEP 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY H++ V+ GDLG S+ + PV + ATLEL + A I G+P+G+LA Sbjct: 64 IVAQYGHFVADVLRGDLGTSLYTNRPVTTDIAEFLPATLELVIFAGILMVGFGLPLGILA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RG DH L L S P F W ++L++L + + L PV+GR+ D + Sbjct: 124 ARHRGRWPDHVVRVLTLLTVSAPSFVWAVILMLLFAFYLPLFPVAGRLDSAY---DITRV 180 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TGF+ +DT I G G F+DA+ H++LPA+ L + R+TR++M+E + YI A Sbjct: 181 TGFLTVDTLIAGNFGAFLDALHHLVLPAVALALSGIGQAARLTRANMVETYDKPYIEMAE 240 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G R+ +A + +++P +T+IGL +L A L E +F+WPGL R+ + + R+ Sbjct: 241 AYGFFPSRIARRYAFKPSLIPSLTIIGLDFAAMLGNAFLVEAVFAWPGLSRYGVAVILRK 300 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D + G VL++A ++VN++VDLL +N RIRH Sbjct: 301 DLNAIMGTVLIIALTFLVVNIIVDLLIAFLNTRIRHS 337 >UniRef50_A7NQN7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQN7_ROSCS Length = 307 Score = 342 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 142/338 (42%), Positives = 201/338 (59%), Gaps = 31/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++R+ L IP +GI +LTF VH+IPGD V M G+ +S ++ Q+ LGL+ Sbjct: 1 MSAYLIQRVLLTIPILLGIVILTFFLVHLIPGDAVSAMQGQLKMSAQQMEQMREALGLND 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q Y+ + GDLG S+ PV AT++L V AM A A+G P+G+L Sbjct: 61 PLHVQLGRYLMRLAQGDLGRSLFGNQPVALLIASNIGATIQLTVAAMAIAIALGAPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRG+++D AV LA+ G S+P FW G+M+I L +V P+ S Sbjct: 121 AAVKRGTLWDVAAVVLAMIGVSIPSFWLGLMMIQLFAVTLGWLPIIEERS---------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +I+PA LG A+IVR+TR++M+E+L DY+RTA Sbjct: 171 ---------------------ARGLIMPAAALGLAEAAIIVRLTRATMVEILNADYVRTA 209 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRN +LP++T+IG+Q GTLL GA++ E +F+ GLG + A+ Sbjct: 210 RAKGLFDSVVLWRHALRNGLLPLITMIGMQFGTLLGGAVVIENVFARQGLGTLVTQAVIN 269 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PVVQG VL+ ATM +LVNL VD+ Y VV+PRIR+ Sbjct: 270 RDFPVVQGCVLVAATMYVLVNLAVDVFYTVVDPRIRYS 307 >UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB n=3 Tax=Coriobacteriaceae RepID=C2D7K8_9ACTN Length = 345 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 129/358 (36%), Positives = 201/358 (56%), Gaps = 36/358 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGL-- 58 M+++I++RL IP F+G+TL+ F +++PGDPV +MAGE+ + L A Sbjct: 1 MIKYIMKRLLQFIPVFLGVTLILFVMENVVPGDPVKLMAGEKKLDAVTELNLRATFHFIE 60 Query: 59 ----------------DKPMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLE 101 D P+W++Y ++ G++ GDLG+S +S PV + + ++ T+ Sbjct: 61 TDDNGAPIFDEQGNTIDTPLWKRYALFVSGLLQGDLGVSFQRSGQPVTQILLAKYPYTIS 120 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 L + A+ VGI G+++A+KR S +D +MP FW GM+L + + Sbjct: 121 LSIVAICLEAIVGIGAGMISAIKRYSFWDMFVTLATSVLVAMPAFWLGMLLQLFFGIVLK 180 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 GF + + G G+ D + ILPA+ L ++ A + Sbjct: 181 DL-----------------TDGFFYLPISGVGGPGSNFDDWMYYILPAVTLASVSTAYVA 223 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R+ RS +LEVL +DYIRTARAKGL+R VI HAL+NA++PVVT IGL G ++AGAILT Sbjct: 224 RIMRSQLLEVLNQDYIRTARAKGLSRRNVIWHHALKNALIPVVTYIGLDFGGMMAGAILT 283 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ET+F+WPG+G A+ +RD+P V G V ++ +++++NLLVD+ Y ++PRIR Sbjct: 284 ETVFNWPGVGFETYRAITQRDWPTVLGSVTVIVVVVMVINLLVDVSYAFLDPRIRFSS 341 >UniRef50_A7NQN2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQN2_ROSCS Length = 316 Score = 341 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 138/339 (40%), Positives = 201/339 (59%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPER-HAQLLAELGLD 59 M +++L+RL LVIPT G++L+ FA + ++PGD V I+ G + +R Q+ LGL+ Sbjct: 1 MNRYLLQRLALVIPTLAGVSLIIFALMRLLPGDVVDILFGGDTQADQRTLDQIRENLGLN 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QYL +I G + G+ G+SM++ IPV E TL+L V A+ FA IP+G+ Sbjct: 61 RPLAVQYLEWIGGFLSGNFGVSMRTGIPVAESIAQGMPVTLQLAVMAIFFACLFAIPLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AAV+R + D + L G S P FW M +++ S + TP G VS + Sbjct: 121 IAAVRRNGVTDMLTRIVGLIGLSFPAFWLATMFLLISSTMFRWTPPLGWVSPFADFGRNM 180 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + + A+ P+A+I+RMTR+S+LEVL +DYIRT Sbjct: 181 QMMLAPALLLALQ-----------------------PMAIIMRMTRASLLEVLRQDYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKGL V++ HAL+NA +PV+TVIG+Q G L+ G+I+ E IFS PG+ LI+ + Sbjct: 218 AYAKGLRDRAVLLRHALQNAFIPVLTVIGVQFGVLMGGSIIIEQIFSLPGIAFLLINGIY 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQ VLL++ + +LVNL VDLLY V+PRIR+ Sbjct: 278 NRDYPVVQSTVLLLSLIFVLVNLAVDLLYSAVDPRIRYD 316 >UniRef50_B9JQI2 Inner membrane component of binding-protein-dependent transport system n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQI2_AGRRK Length = 348 Score = 341 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 119/332 (35%), Positives = 185/332 (55%), Gaps = 17/332 (5%) Query: 8 RLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPMWQQY 66 RL T + + +LTF V + PGDP +++AG++G S P A++ LG+D P+ Q Sbjct: 30 RLAKAAITLLAVIVLTFVLVRLAPGDPALLLAGDQGGSDPAFVAEIRQHLGVDGPIHLQL 89 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 HY+ V D G S + + PV + + R ATL L + A +F+ G+ +G LAA + G Sbjct: 90 WHYLQAVARLDFGTSYRDQRPVIDIVLERLPATLLLTISAFVFSIVTGVGLGALAARRPG 149 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFML 186 S D L++ ++MP+FW G++ I++ +V P G Sbjct: 150 SAIDSAVTTLSVAFFAMPMFWIGLIFIIVFAVKLGWLPSYGM----------------QA 193 Query: 187 IDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLT 246 A G F D AHM+LP + LG +++ R++R+++L++ D+IRTARAKGL Sbjct: 194 ASAAAKGGWAAFGDLAAHMVLPVLTLGLYYMSIHARVSRAALLQISDMDFIRTARAKGLP 253 Query: 247 RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVV 306 V H LRNA+LP VTV LQ G L+ G+IL ET+F+WPG+GR D+L RDY V+ Sbjct: 254 AWLVWRDHLLRNALLPTVTVAALQAGQLIGGSILVETVFAWPGIGRLAFDSLASRDYNVL 313 Query: 307 QGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +L + +++ NL+ D+ Y +++PRI + Sbjct: 314 VAVFILSSFGVLIANLIADMAYRLIDPRIDRE 345 >UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VQ3_BRAJA Length = 315 Score = 341 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 131/338 (38%), Positives = 207/338 (61%), Gaps = 26/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M +++RRL L++ T GI+++ F + ++PG+ V I+ G + P A L ELG+D Sbjct: 1 MFAYLVRRLFLMLVTLFGISVVIFFLLRIVPGNIVDILFAAAGYVDPADKANLEKELGID 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY H+I G + GD G S S P +E +PR T L A++F+ ++GIP+GV Sbjct: 61 QPLVVQYWHWISGFLRGDFGYSYVSEKPALQEILPRIPITARLAGLALLFSASIGIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+G+ D+ ++L+G S+P FW G++++ + P Sbjct: 121 ISAVKQGTRLDYALRVVSLSGLSLPSFWLGLLVLTASVAMFGQMP--------------- 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +F +AVA +PA+V+G A+ +R+TRSSMLEVL +DYIRT Sbjct: 166 ----------LFNPNPQSFGEAVATYCIPAMVVGFRSSALTMRITRSSMLEVLRQDYIRT 215 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG + V HAL+NA+LPV+TVIG++ L+ G I+TET+F+ PG+ R+L++A++ Sbjct: 216 ARAKGASDAAVNYQHALKNAILPVITVIGIEAAFLIGGLIVTETVFNIPGVARFLVEAIR 275 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP+VQ V+L+A +++ N +VD+LY V +PRIR+ Sbjct: 276 WRDYPIVQNLVMLIAVVVVSANFIVDMLYAVFDPRIRY 313 >UniRef50_C0GIS4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIS4_9FIRM Length = 316 Score = 341 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 120/336 (35%), Positives = 179/336 (53%), Gaps = 23/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +LRRL + +G+T+ TF +H PG P+ E + P + L LD+ Sbjct: 1 MTLLVLRRLAQTVIVLLGVTVATFFIMHSAPGHPLQA-NPELRLDPTAVERWLELRDLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GD G S+ PV E R ATL L V + + A A + G+ Sbjct: 60 PLPAQYVSWVSRMLRGDFGNSLIYNRPVVELIAERLPATLLLTVSSFLLALATAVVCGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS+ D ++L G SMP FW GM+ IM+ S P G + Sbjct: 120 AAIRQGSLLDRLVGAVSLLGISMPGFWLGMLFIMVFSYRLAWLPGVGMRTPG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+D VAHMI+P VL A VR R ++LE+L +D++R A Sbjct: 172 --------------GEGFLDLVAHMIMPVTVLAVAGFAHYVRYVRGAVLEILEQDFVRAA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+GLT+ +++ H L NA +P+VTV L + L GA++ E +FSWPGLGRW+I + Sbjct: 218 RARGLTQKQILFRHILPNAAVPIVTVAALSIPMLFTGALVAENVFSWPGLGRWIITSTLA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV+ + A ++ L N L D+LY V++PR+R Sbjct: 278 RDYPVIMTVNMYTAMLVALANFLADVLYMVIDPRLR 313 >UniRef50_Q65HR2 Oligopeptide ABC transporter (Permease) n=2 Tax=Bacillus RepID=Q65HR2_BACLD Length = 313 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 114/317 (35%), Positives = 180/317 (56%), Gaps = 33/317 (10%) Query: 25 AFVHMIPGDPVMIMA--GERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISM 82 F+ PGDPV M + ++ E+ ELGLDKP++ QY ++ DLG S Sbjct: 24 VFMKAAPGDPVKQMLRVDDVAVTDEQIEAFREELGLDKPVYIQYWNWFKRFFQFDLGKSY 83 Query: 83 KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYS 142 + PV +E +F ATL L +++ + +PVG L+A+ R DH + LAL G + Sbjct: 84 TTHEPVIDELSRKFPATLLLTGASLLVMLLIAVPVGTLSALYRDRWIDHLSRLLALVGAA 143 Query: 143 MPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAV 202 +P FW G++LI L SV N P G + Sbjct: 144 LPSFWLGLILIDLFSVRLNWLPSMGAGT-------------------------------F 172 Query: 203 AHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLP 262 H+ILP++ LG V VR+ RSS++E LG+D+IR+ARA+G++ R+ HA R+ ++P Sbjct: 173 KHLILPSLTLGIAMSGVYVRLVRSSLIESLGQDFIRSARARGISEARIFFFHAFRHCLVP 232 Query: 263 VVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNL 322 V+T+ G+ +G+LL G ++ E +F++PG+G+ ++DA+ +RDYP++QG +L + ++L+NL Sbjct: 233 VITIFGVSLGSLLGGTVIIEVLFAYPGVGKLVVDAIVQRDYPIIQGYILFMGIAVVLINL 292 Query: 323 LVDLLYGVVNPRIRHKK 339 LVDL Y +NP IR K+ Sbjct: 293 LVDLSYRYLNPEIRLKE 309 >UniRef50_O58538 323aa long hypothetical oligopeptide transport permease protein APPB n=1 Tax=Pyrococcus horikoshii RepID=O58538_PYRHO Length = 323 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 181/337 (53%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I++R +I + L F ++ PG+P +MAGE + E + A GLDK Sbjct: 4 MKVYIIKRSIQLILVIFFVLFLNFIIINAAPGNPAQLMAGEYS-TEEYIKAIEARWGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++L Y+ ++HGDLG S + PV + + R TL L V ++I A VG+ + + Sbjct: 63 PIHIRFLIYMKNLLHGDLGYSYRYLEPVSKLIMERIGKTLLLTVPSIILAFLVGVWLARI 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K G D + + L YSMP FW G++LI++ V + P++G + Sbjct: 123 AARKPGGKLDVSLSIITLIFYSMPSFWLGLLLILVFGVKLGILPIAGMTN---------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 I D + HM+LP L I + R+TR +++E EDY++T Sbjct: 173 ------IRAVYSSSWDKAFDILKHMVLPVTTLMLIQIPAYFRITRGAIIEQSTEDYVKTF 226 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G ++ + + RNA+LP VT++GL++G +GA L E +F WPG+GR L+DA Sbjct: 227 DAVGFSKKHIFNKYIFRNAILPPVTILGLRLGYAFSGAALVEIVFGWPGMGRLLLDAAFA 286 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++ G L++A + + + DLLY V++PRIR+ Sbjct: 287 RDYPLIMGIYLVIAVSVAVAIFITDLLYAVLDPRIRY 323 >UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4F9_9FIRM Length = 321 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 116/335 (34%), Positives = 186/335 (55%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + I +R+ T + +TL FA + M+PGDPV G + E+ G D+P Sbjct: 11 AKMIGKRVVQSCITILLVTLFVFALIQMVPGDPVANYLGATA-TEEQITYYRHLYGFDRP 69 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QYL +I G+ G +G S+ + + + +PR TL + + A I T GI G++A Sbjct: 70 VIVQYLSWIGGLFRGTMGQSISYQSEIADIILPRLGTTLTMVIPAFIIGTITGILFGIIA 129 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RG D A G SMP+FW GMM +++ ++ + P SG V Sbjct: 130 AKNRGKTIDSVISFFANIGVSMPMFWLGMMGMLVFALKLRVLPSSGYVPITR-------- 181 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +F ++HMI+P IVL A VR+TRSSMLEV+ +DY+ TAR Sbjct: 182 ---------------DFGGWLSHMIMPIIVLSLGVNAGFVRLTRSSMLEVMRQDYVTTAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+++ V H LRN+M+P+VT +G+++G+++ +L E++F PGLG +++ + R Sbjct: 227 AKGVSKKDVTFRHQLRNSMIPIVTTMGMRLGSMVGSTVLIESLFVIPGLGSVMMNGISNR 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+ +V GVL+++ + + NL+VD+LYG+++PR R Sbjct: 287 DFMLVANGVLIISIFVAICNLVVDILYGIIDPRTR 321 >UniRef50_A6UUC5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UUC5_META3 Length = 314 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 186/343 (54%), Gaps = 35/343 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA----GERGISPERHAQLLAEL 56 M FILRRL L IP I ++L++F+ ++ PG+P I+ + + +L Sbjct: 1 MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKL 60 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLDKP + Y+ ++ + GD G+S+++ PV +EF+ RF T+ + V A +G+ Sbjct: 61 GLDKPFYDLYVIWLSKALTGDFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVV 120 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G+L+A+ + I D+ A ++P FW ++LI + SV + G Sbjct: 121 MGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVFSVKLKIISAFGY-------- 172 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 + + +ILP+ LG + R+ R+ +LEV+ DY Sbjct: 173 -----------------------NGLDSLILPSFALGLGMAGSLARVLRTCILEVMSSDY 209 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I TARAKGL+ V++ H L+NA LPV+T++G++ LL GA++ E+IF WPG+G + ID Sbjct: 210 ILTARAKGLSNKVVVLKHVLKNAFLPVITLMGMKTAYLLGGAVIIESIFGWPGIGSYFID 269 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + +DYP V G V + + +LVNL+VD+ Y +++PR+R+ K Sbjct: 270 IINAKDYPAVSGLVFIFGILFVLVNLIVDISYAILDPRVRYDK 312 >UniRef50_P77308 Probable D,D-dipeptide transport system permease protein ddpB n=53 Tax=Bacteria RepID=DDPB_ECOLI Length = 340 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 144/332 (43%), Positives = 213/332 (64%), Gaps = 4/332 (1%) Query: 5 ILR-RLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 ILR R ++ G+ ++TF H+IPGDP ++AG+R S + +LGLD+P++ Sbjct: 6 ILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRA-SDAIVENIRQQLGLDQPLY 64 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q+ Y+ + HGDLG S+++ PV EE F ATLEL A++ A +GIP+G+L+AV Sbjct: 65 VQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAV 124 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 R DH +A+TG S P FW G+ +I+L H + P GR+ D LD +TG Sbjct: 125 WRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDW--LDPPTHVTG 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 F L+D + G F +A+ H+ILPA+ L + L ++ R RS+MLE L EDYIRTARA Sbjct: 183 FYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARAS 242 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL +++ +AL NA++P +TV+GL +G LL GA+LTET+F+WPG+G W++ ++Q D+ Sbjct: 243 GLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDF 302 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 P V G ++V+ +LVNL+VDLLY ++PRI Sbjct: 303 PAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI 334 >UniRef50_P0AFH4 Oligopeptide transport system permease protein oppB n=178 Tax=Bacteria RepID=OPPB_ECO57 Length = 306 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 116/338 (34%), Positives = 183/338 (54%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FILRR IPT + ++F + + PG P GER + PE A + A+ L+ Sbjct: 1 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGERTLPPEVMANIEAKYHLND 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ + HGD G S K + V + F + +LG A A +G+ GV Sbjct: 58 PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + +D+T +GLA+TG +P F +L+M+ ++ + P G Sbjct: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGG-------- 169 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A+ MILP + L +A I R+TR SM+EVL ++IRT Sbjct: 170 ---------------------ALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R+I+ HAL+ A+LPV++ +G ++ G+++ ETI+ PG+G+ ++ Sbjct: 209 ARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V +LV + IL N +VD+LY V++P+IR+ Sbjct: 269 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306 >UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease protein n=95 Tax=Bacteria RepID=Q316S1_DESDG Length = 391 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 117/336 (34%), Positives = 186/336 (55%), Gaps = 16/336 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ FI+RR+ + I+ + FA H + GDPV M G +S + L +LGL+ Sbjct: 67 MIAFIVRRVTQALIVMFVISFIGFAIKHSL-GDPVREMVG-VSVSVQEREALREQLGLND 124 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q+ ++ GDLG S R P E + + ATLEL C+ + + PVGV Sbjct: 125 PYLVQWGRFVKNAAQGDLGQSFFYRKPAMEVILDKAPATLELVFCSTLLILLISTPVGVY 184 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + S +G ++ G S+P+F ++LI + +V + P GR Sbjct: 185 AAYRPNSPLSRFFMGFSVVGVSIPVFLTAILLIYIFAVELHWLPSYGR------------ 232 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G + W +D + H+ILP+I L +I L + +R+ R+ M EVL +Y++ A Sbjct: 233 --GETVTLFGFWSTGLLTLDGLKHLILPSIALSSIMLPLFIRLIRAEMKEVLETEYVKFA 290 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RV++VHA +N +LPV+TV G+Q+G ++A ILTET+F W G+G I+A++R Sbjct: 291 RAKGLRERRVLMVHAFKNTLLPVITVGGVQIGLMIAYTILTETVFQWQGMGFMFIEAVER 350 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D ++ ++ V + ++VN +VD++YG+VNP +R Sbjct: 351 SDTALLVAYMVFVGALFVVVNTVVDIIYGLVNPMVR 386 >UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobacteria RepID=B9JIR5_AGRRK Length = 340 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 123/333 (36%), Positives = 196/333 (58%), Gaps = 1/333 (0%) Query: 6 LRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQ 65 +R+ IP+ IG+ ++TF +PGD +PE AQ+ LGLDKP+W Q Sbjct: 8 AKRIATAIPSIIGVVIVTFLLARALPGD-AAAYYAGSSATPESIAQIRTALGLDKPLWFQ 66 Query: 66 YLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKR 125 + +Y + ++HGDLG S+ S PV+++ R A++EL +CA++FA +G+P+G+ AA + Sbjct: 67 FGNYAFRLLHGDLGTSLSSGQPVFQDLATRLPASIELTLCALLFAMLIGLPLGITAATRP 126 Query: 126 GSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFM 185 G DH + G + P F+ + L+ + + P + + +TG Sbjct: 127 GKTVDHICRIIVSVGAAFPTFFVALGLVYVFYFRLGIAPEPLGRLNDTYFSMPPTITGLY 186 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 LIDT + G+ F +++ ++LP+I LG LA I R+ R+SML L D+ RTARA GL Sbjct: 187 LIDTLLVGDVAAFWASLSQLVLPSISLGLFALAPIARIARASMLASLSSDFCRTARAMGL 246 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 +R R++ + LRNAMLPVV ++G+ LL +L E +F+WPG+G + ++A+ DY Sbjct: 247 SRTRIVYGYGLRNAMLPVVNILGMVFSFLLGANVLVEQVFAWPGIGAYAVNAVITSDYAA 306 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VQG VL++A + IL+NL VDL ++PR+R+ Sbjct: 307 VQGFVLMMAILYILLNLAVDLTAAAIDPRVRYD 339 >UniRef50_B1MFX6 Probable dipeptide-transport integral membrane protein ABC transporter DppB n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MFX6_MYCA9 Length = 323 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 124/337 (36%), Positives = 190/337 (56%), Gaps = 31/337 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++I +RL L IP IG +LL ++ V+ +PGDP+ +AG+R +PE AQL L+ P Sbjct: 18 FRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPFTPEVMAQLRERFHLNDP 77 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +Y YI G +HGD G + + PV + R TL L V A+ F T +GI GVL Sbjct: 78 FLVRYGKYIVGFLHGDFGTDFQ-QRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLC 136 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV+RGS +D+ + SMP+F G + L P++G Sbjct: 137 AVRRGSFYDNLVLVTTTLLVSMPVFVLGFLAQYLFGFKLGWFPIAG-------------- 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D +LP +VL ++ +A + R+TR+SMLE + +++RTAR Sbjct: 183 ----------------IRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG++ R+++ H LRN+++PVVT IG VG LLAGA++TE++F+ PGLGR DA++ + Sbjct: 227 AKGISESRILLRHTLRNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQ 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + VV + L+ I NL+VD+LY +++PRIR++ Sbjct: 287 EGAVVVSILTLIVFFYIFFNLVVDILYALLDPRIRYE 323 >UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Tax=Actinobacteria (class) RepID=A4AG90_9ACTN Length = 353 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 127/334 (38%), Positives = 203/334 (60%), Gaps = 3/334 (0%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPM 62 ++LRRLG + G+T++TFA +++PGDP+ GE S P + E GLD+P+ Sbjct: 20 YLLRRLGTSVLLLFGVTVVTFALANLVPGDPIAAALGEGAASNPATVEAYIQERGLDQPL 79 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY +YI G+ GD+GIS+++ PV + AT+E+ + A++ + VG+ +G LAA Sbjct: 80 PVQYANYIGGLFQGDMGISLRTAQPVASDLAKAVPATVEIALLAIVVSLGVGVALGSLAA 139 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +RG I D +L G S+P FW ++ + + P +GR+S ++ + +T Sbjct: 140 YRRGKISDQLVRVFSLIGLSIPTFWMALVSFNFFFLQLRIAPGAGRLSPVLPPPPT--VT 197 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 GF +D+ + G+ F DA+AH++LP VL + ++ R R+S+LEVL DY+R RA Sbjct: 198 GFYTVDSLLAGQWVTFTDALAHLMLPVFVLSLFTIGLLTRFVRTSVLEVLDADYVRAGRA 257 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL+ R++ + LR A LP++T++GL GTLL+G +L E +F+WPGLG + ++ D Sbjct: 258 KGLSGSRLLFGYVLRGASLPILTIVGLAFGTLLSGTVLVEAVFAWPGLGSYAYNSATSLD 317 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 P V G L+V + + +N VDLLYGV++PR+R Sbjct: 318 LPGVMGVGLVVGVVYLSINFAVDLLYGVLDPRVR 351 >UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bacteria RepID=A8I2Z1_AZOC5 Length = 343 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 127/330 (38%), Positives = 196/330 (59%), Gaps = 3/330 (0%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQY 66 RR +P +G+ + TF + ++PGDP + A E + ++GLDKPM +Q Sbjct: 13 RRFLSSLPALLGVLVFTFLLMRVLPGDPAVFFASGPTAGKEEIETIRKQMGLDKPMPEQL 72 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 Y+ V G+LG S+ + PV + R A+LEL A+ A +P+G+ AA++ G Sbjct: 73 GRYLVDVAQGNLGRSLTTGQPVSADLKERLPASLELTFAALFIALLSAVPLGIAAALRPG 132 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTP-VSGRVSDMVFLDDSNPLTGFM 185 S+ DH L G +P F G++LI + P +GRV +F TGF+ Sbjct: 133 SVVDHGVRLLCALGVCVPTFVSGLLLIYVFYYLLGYAPDPTGRVD--IFTSLPPRATGFL 190 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 LID A+ G+ + A + ++LPA + +A + R+TR++ML LG D++RTAR+ GL Sbjct: 191 LIDFALAGDFEGWRAAASQLVLPAFTMALFVVAPLARITRAAMLSSLGSDFVRTARSIGL 250 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 +R R+I+V+ALRNA+LPV+T+ G+ T+L +L E +FSWPG+ + +DAL DY Sbjct: 251 SRWRIIVVYALRNAILPVLTITGIVFSTMLGANVLVEKVFSWPGVASYALDALLASDYAP 310 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 VQG VLL+A + +LVNL++D+LYG+ +PRI Sbjct: 311 VQGFVLLMAFIFVLVNLVIDILYGIADPRI 340 >UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropyrum pernix RepID=Q9YFD8_AERPE Length = 342 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 124/343 (36%), Positives = 193/343 (56%), Gaps = 9/343 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +++I+ R IPT G+++L F ++ GDP I ++PE ++ D P Sbjct: 3 IKYIIYRFLSAIPTLFGLSILVFILTRLV-GDPAAIYI-HPDMTPEDVQRVRELYHFDDP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 ++ QY++++ GV+ GDLG S+ + +PV E ATLEL + A + VG+ +G A Sbjct: 61 LYVQYIYWLKGVLQGDLGYSVTANMPVTEAIKSFLPATLELALYAFTLSIIVGVYLGTKA 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + + DH LAL+GYSMP+FW +ML+ L + GR+S V P Sbjct: 121 AANKDKLIDHLTRLLALSGYSMPVFWLALMLLYLFYNVLD-FVGPGRLSLEVRFKYMPPY 179 Query: 182 ------TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 TG + ID + FIDAV H+I P + I +A+ +R+ RSSM+E + ++ Sbjct: 180 GDFKFYTGLLTIDALLNRNIEVFIDAVKHLIPPVLTQTYIHIAIFIRVLRSSMIEEMNKE 239 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 Y+ A +KGL R V+ + RN+ + +V V GLQ L++G +LTET+F+WPGLGR+ Sbjct: 240 YVDFALSKGLRREVVLKDYVRRNSYISLVNVAGLQFVGLMSGVVLTETVFNWPGLGRFAA 299 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +A + D V G L V T+ I+VNL VD+L ++PRIR++ Sbjct: 300 NAAIQLDPAAVVGFTLFVGTLFIVVNLAVDILLAYLDPRIRYE 342 >UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECM8_9ACTN Length = 345 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 125/354 (35%), Positives = 205/354 (57%), Gaps = 35/354 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGL-- 58 M ++I++R+ IP F+G+TL+ FA +++PGDP+ ++ G++ +SPE QL L Sbjct: 1 MGKYIVKRVLQFIPVFLGVTLILFALQNIVPGDPIKLIGGDKALSPEVELQLRVRYHLVQ 60 Query: 59 --DK--------------PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL 102 D + +YL+Y+ G++HGDLG S + ++PV E F ++ T++L Sbjct: 61 TDDDGNAILDENGDPVQTSLVDRYLYYMNGLLHGDLGNSYQRKLPVTEIFAQKYPYTVKL 120 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 CA++ +GI G+++AVKR S +D ++P FW GM+L + V Sbjct: 121 AACAIVLEAIMGIGAGIISAVKRYSFWDILVTLTTSILVAVPAFWLGMLLQLFFGVILK- 179 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 + G + + + G + H +LP I L ++ A R Sbjct: 180 ----------------DATGGAISMPISGAGGSSSQYQDWMHYVLPTITLASVSTAYAAR 223 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 + RS +L+V+ +DYIRTA+AKGL+ +I+ HAL+NA++PVVT IG+ G +L+GAILTE Sbjct: 224 IMRSQLLDVMNQDYIRTAKAKGLSNRAIIVKHALKNALIPVVTYIGVDFGGMLSGAILTE 283 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 T+F+WPG+G + A+ RD+P+V GGV L+ +++++NLLVD+ Y ++PRIR Sbjct: 284 TVFNWPGIGYEVYRAISMRDWPIVMGGVTLIVVVVMVINLLVDISYAFLDPRIR 337 >UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D511_DESK1 Length = 324 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 192/335 (57%), Gaps = 17/335 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 F+ RR + + + ++F ++PGDP+ +M + ++ ++ A L + GL+KP Sbjct: 6 TTFLTRRAFSSVLSIFILLSISFILFRLLPGDPISLMFRDPRLTQDQLAYLREKFGLNKP 65 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W+QY Y+W + GDLGIS + PV E + R TL L + A I + +G+ GV++ Sbjct: 66 LWEQYFIYLWNTVRGDLGISFYYKQPVTEILLERIVNTLMLLIPATIVSILLGVLTGVVS 125 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + GS+ D G AL Y++P +W G +LI+ + +L P+ Sbjct: 126 AWRHGSLVDKVVSGSALVLYTLPTYWLGGLLILASINYLHL-----------------PV 168 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG + D +HMILP I L + + R+SML+VLGEDYIRT Sbjct: 169 TGMRDYGVHYSSMLEHLYDLASHMILPFITLVLVNYGGFTLLVRASMLDVLGEDYIRTYY 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G R++ + L+NAMLP +T I + + T ++GA+LTETIF+WPG+GR + +A+ R Sbjct: 229 AVGFREGRILFKYGLKNAMLPTLTAISIAIATSVSGAVLTETIFAWPGIGRLIYEAVYNR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP++QG L++A ++L NL+ DLLYG+++PR+R Sbjct: 289 DYPLLQGAFLVIAVSVVLANLIADLLYGLIDPRVR 323 >UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, membrane) n=4 Tax=Alteromonadales RepID=Q3IF63_PSEHT Length = 344 Score = 339 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 135/335 (40%), Positives = 208/335 (62%), Gaps = 6/335 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +ILRR+GL + + +++ TF + PGD + ++G + +H QL + + Sbjct: 3 LDYILRRIGLFVFMVLMLSVFTFLLSFLFPGDALSNLSGIPSNNFAQHTQLEDKYLYNSN 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY+ ++ ++ GD G+S S V+ + + ATLEL + A+ + +G+P G+LA Sbjct: 63 YFMQYIAFLGRILQGDWGLSFASGDSVFSQILDLIPATLELSIYALFVSVVIGVPTGILA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 + D + GYSMPIFW ++LIML S+ P+SGR+S L + P Sbjct: 123 SAYYKQWPDKLISSTTMIGYSMPIFWLALLLIMLFSLQLGWFPMSGRMS---LLYEIPPT 179 Query: 182 TGFMLIDTAIWGEDG---NFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 TGF+LID ++ FIDA+ H+ LP IVL P V++R TR SML+V+ +++I+ Sbjct: 180 TGFILIDISLASFPYQGMAFIDALHHLTLPTIVLAMYPTTVLIRFTRESMLKVMDQNFIK 239 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL R ++II HALRNA+LPV+ IGLQ TL+ A++TE IFSWPG+GRWLID++ Sbjct: 240 TARAKGLNRRQLIIHHALRNALLPVIKQIGLQFSTLITLAMITEIIFSWPGIGRWLIDSI 299 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNP 333 +RDYP +QGG++ V+ II ++ +L+Y + +P Sbjct: 300 YQRDYPAIQGGLMAVSLFIIFATIIAELIYTLFDP 334 >UniRef50_B6JJN3 Dipeptide transport system permease protein DppB n=3 Tax=Proteobacteria RepID=B6JJN3_OLICO Length = 317 Score = 339 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 25/340 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV--MIMAGERGISPERHAQLLAELGL 58 ML++ +RR L+IPT G+ +L F + +PGD V ++ ++PE A LGL Sbjct: 1 MLRYTIRRFLLMIPTLFGVAVLVFIMLRAMPGDIVEMRMLMDGGQVTPEALIVERARLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+W Q+ +I G+M GD G SM + PV +E R +LE+ + A I A + IP+G Sbjct: 61 DQPLWYQFYDWITGIMVGDFGTSMWTGRPVIDEISSRLGLSLEVAILATILAILISIPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 ++A+ + DH A+ G ++P FW GM++I+ + + +N P Sbjct: 121 TISALYNNTWIDHVIRTFAIAGLAIPSFWLGMLIILGLLLTFNWIPPLTYTPI------- 173 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + I ++ +I PA+ +G AV RMTRS++LEVL EDYIR Sbjct: 174 ----------------WEDPITNLSQLIWPALAVGYRYSAVATRMTRSTLLEVLQEDYIR 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ V+ HA+RNAMLPVVTVIGL+ L+ G ++TE +F+ G+G+ ++ + Sbjct: 218 TARAKGVYERLVLSRHAIRNAMLPVVTVIGLEFAFLIGGLVVTEQVFNLNGIGKLFVETV 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 R DY +VQ V+LVA I VN +VDLLY V++PRIR+ Sbjct: 278 TRADYTMVQALVMLVAAFFIAVNFVVDLLYAVLDPRIRYS 317 >UniRef50_A9KKM2 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Clostridiales RepID=A9KKM2_CLOPH Length = 334 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 181/346 (52%), Gaps = 25/346 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV----MIMAGERGISPERHAQLLAEL 56 ML++ L+RL + I G++++ + V M+P D + + ++ E ++ Sbjct: 6 MLKYFLKRLAISIIILFGVSIIIYFIVRMMPADYIDQHTAAQVAQGQLTLEDVQRMKELY 65 Query: 57 GLDKP----MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 G+ + + Y +I + GD G+S PV + + + + AMI Sbjct: 66 GIGDNSIGGIIKSYGQWITKALRGDFGVSFVYGRPVHQVIAKYMWISFGISLAAMILNIL 125 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM 172 + IP+G++AA K+ D+ LA+ G S+P F+ G +L+ + S+ P+ G Sbjct: 126 ISIPLGIVAATKQYGAADYIVTVLAMIGISLPSFFLGALLLRVFSIGLGWFPLQG----- 180 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 D + +TGF + +D + H++LP L + + ++R TR++MLEVL Sbjct: 181 -LSDATQIITGFKQV-----------LDKLHHLVLPMTTLVILNIGGLMRYTRTNMLEVL 228 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 DYIRTARAKGL+ VI HA RN ++P+VT++G + L GA+LTET+F+ PG+G Sbjct: 229 NSDYIRTARAKGLSEKSVIYKHAFRNTLIPIVTMLGGSLPGLFGGALLTETVFAIPGIGS 288 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ + D P V G ++ +A + +L + D+ Y +V+PR++ + Sbjct: 289 TSYKAMLQGDIPFVMGYMMFIAVLTVLGTIFADISYAIVDPRVKLQ 334 >UniRef50_C4WPU5 Dipeptide transport system permease protein dppB n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU5_9RHIZ Length = 365 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAF-VHMIPGDPVMIMAGERGI---SPERHAQLLAELG 57 L + LRRL + ++L+ FA + + P + A E +++ + G Sbjct: 22 LNYALRRLLTLPVVLFALSLMLFALQMSLSPTQRLAAYAPSPDFLKGGQESIRRMIEQYG 81 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L+ P QY +I +M G+LG S +R PV ATLEL + A I + + I + Sbjct: 82 LNDPFHVQYGRWIGNIMTGNLGWSETARQPVSHALTSLLPATLELVLLAFIPSFLLAIYL 141 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTP---VSGRVSDMVF 174 G A + DH + G+S P++ +G++++++ + P +S V Sbjct: 142 GSRAGIYLNKWPDHLIRIFTILGWSFPVYVFGLLMLLIFYSALDWFPPGRLSQWAQATVM 201 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 D TG ID + G F D++ H+ P I L + LA + R+ R+SMLE L + Sbjct: 202 SPDFTRYTGANTIDAILNGNLQIFWDSLRHLAAPVITLTYVNLASMTRVMRTSMLETLRQ 261 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DY+RTARAKG+ + V + HA RNA+LPV T+ G+++ T++ G ++TETIF + GLG++ Sbjct: 262 DYVRTARAKGMPKRVVELRHARRNALLPVTTIAGMELATMMGGVVITETIFDYAGLGQFA 321 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + D+P + G L A +++L+NL+VDL+Y +++PR++ + Sbjct: 322 AKSAANLDFPAILGFSLYFAIVLVLMNLIVDLIYPLLDPRVKTR 365 >UniRef50_Q1LMX8 Binding-protein-dependent transport systems inner membrane component n=36 Tax=cellular organisms RepID=Q1LMX8_RALME Length = 340 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 131/339 (38%), Positives = 190/339 (56%), Gaps = 22/339 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPER-HAQLLAELGLDK 60 L F L RL + IG+ ++ F + M PGDP +MAGE G QL + GLD+ Sbjct: 10 LSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQ 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q Y+ GV DLG S ++ +PV + + R AT L A +F+ +G+ +GV+ Sbjct: 70 PVLTQLGIYLKGVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVI 129 Query: 121 AAVKRG----SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 AA R D + AL Y+ P+FW +M I+L SV P G S Sbjct: 130 AARTRYENRRRWIDSAVMSGALLLYATPLFWLSLMAIILFSVVLGWLPAFGMESVG---- 185 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 A + D H++LP I LG +AV VR+TR+SMLEV+G D+ Sbjct: 186 -------------AGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDF 232 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 ++TARAKG+ RVI VH LRNA+LPV+T G+Q+G + GA+LTET+FSWPG+GR + D Sbjct: 233 VKTARAKGVPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFD 292 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 AL +RDY ++ G + + +++ NL+ D++Y ++PRI Sbjct: 293 ALLQRDYQLLLGIFFVTSALVVFFNLVTDVVYRFIDPRI 331 >UniRef50_C9M9U0 Oligopeptide ABC transporter, permease protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U0_9BACT Length = 319 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 177/337 (52%), Gaps = 34/337 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++L+RLG + T + TF + IPGDP+ MA R + + A A GLDK Sbjct: 12 MAKYVLKRLGYMFFTLFVVVTATFFLMRAIPGDPLSSMA--RNLPEQTKANFYARYGLDK 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QY Y+ ++ GDLG S+ V + + +G A++ VG+ +GV Sbjct: 70 PLVEQYGIYMKNLLRGDLGESVVFPGRSVAQTIAQTSPVSAAVGGLALVIGLVVGVALGV 129 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+ + D+ + +A+ G ++P+F G + + +V + P SG Sbjct: 130 LAALFKNRWPDYVVMFIAILGITIPVFVLGSLFQYVFAVKLHWLPASG------------ 177 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 WG NF +LP +V+ +A R +SSML+VLG+DY+ T Sbjct: 178 ------------WGLKKNF-------VLPVLVMCFGTIATYARYIKSSMLDVLGQDYVLT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +V+ H +RNAMLP +T++ Q+ + GA +TET+FS PG+G + + ++ Sbjct: 219 ARAKGLSEFQVVTRHVMRNAMLPSITLLASQIVGIFCGAFITETMFSIPGIGFYYVSSIN 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DY + G + A + +++ L VD Y +V+PRIR Sbjct: 279 NNDYWMTMGTTIFFAGLFVVMQLAVDFAYMLVDPRIR 315 >UniRef50_A8Z099 Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein n=47 Tax=Bacillales RepID=A8Z099_STAAT Length = 320 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 100/336 (29%), Positives = 178/336 (52%), Gaps = 18/336 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M++ IL+RLGL+IP I I+++ F+ + PGDP + + I E +LGL+ Sbjct: 1 MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGK-IKQEAINAQREKLGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY+ ++ V+HGDLG S+K + PV + R T+ LG ++I + +G+ Sbjct: 60 SIPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGIT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + S+ D+T ++P F G+ I + S P G V + Sbjct: 120 SGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDINLKE----- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G ++ + H LPA LG + A ++ R+ ++E +DY+ TA Sbjct: 175 ------------GTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTA 222 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL+ ++ H LRN+++P++T +G + ++L GA++TETIFS+ G+G+ ++++ Sbjct: 223 RSKGLSMNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIG 282 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +DYP++ L + + +L NL+ D+ YG ++PRIR Sbjct: 283 QDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIR 318 >UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Tax=Deinococci RepID=Q5SL23_THET8 Length = 332 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 120/343 (34%), Positives = 188/343 (54%), Gaps = 21/343 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+R+ +IPTF G T L F + M PGD + + + ++PE A+L A+ GLD+ Sbjct: 6 MASYILKRILSLIPTFFGATFLAFLIIQMAPGDYLTQLELDPKVTPETIARLRAQFGLDR 65 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QYL ++ ++H +LG S + PV E PR ++ L V + + + +PVGV Sbjct: 66 PFHEQYLLWMHNLLHLNLGYSFAYQAPVLEIVWPRVLNSMVLVVPSTVLLFLIAVPVGVY 125 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIML-----VSVHWNLTPVSGRVSDMVFL 175 A+++ S+ D LA G ++P F+ ++L+ L + PVSG S Sbjct: 126 GALRQYSLGDRVVSFLAYLGLAIPNFFLALILMYLVLQVYFRTGVMVFPVSGMTSSGFEQ 185 Query: 176 DDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 + +D H +LP +VL T +A R+ R MLE L +D Sbjct: 186 ----------------FSFWQKVVDVAWHAVLPIVVLTTSDIAGFSRIMRGQMLEALSQD 229 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 Y+RTARAKGL V+ HALRNA++P+V IG + TL++GA L E + +WPG+ L+ Sbjct: 230 YVRTARAKGLPERVVVYKHALRNAIIPIVANIGGILPTLISGAGLVEVVTAWPGITPLLL 289 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DA+ ++D VV G + + ++++ NLL DLL V+PRIR++ Sbjct: 290 DAISQQDLYVVAGFLTMGLVLLMIGNLLSDLLLAWVDPRIRYE 332 >UniRef50_C8W528 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W528_DESAS Length = 316 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 127/345 (36%), Positives = 192/345 (55%), Gaps = 37/345 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGD-PVMIM----AG-ERGISPERHAQLLA 54 M QF+ +RL I ++LTF +H+ PGD PV I+ G E+ + + Sbjct: 1 MWQFLFKRLAAAILVVAAASMLTFGILHLTPGDTPVTILKHAFIGIEQEPTDSEVTNITN 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 LD+P+ +QY +I + G+LG S R V + RF AT+ L + ++ + + Sbjct: 61 RYKLDEPLDKQYFSWIKEAVRGNLGESYVYRTSVAQIIGLRFPATVLLALVSVALSLLIA 120 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 IPVGV +A +R S+FDH + AL S+P FW ++LI++ S+ +L V+G Sbjct: 121 IPVGVFSAARRNSVFDHLSRLCALFAVSIPSFWLALLLIIVFSLQLDLFSVAGFRQISDV 180 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 +LP + + AV +RM RS MLE+L + Sbjct: 181 -------------------------------VLPCVTIAAGMSAVTMRMMRSCMLEILNQ 209 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYI TA+AKGL V+ HALRNA LPV+T++GLQ G +L G ++ ET+F+WPGLG+ L Sbjct: 210 DYILTAKAKGLHESVVVWRHALRNAFLPVITIVGLQFGHMLGGTVVVETVFAWPGLGKLL 269 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ID++ +D P+VQG ++L+AT +VNLLVDL Y +++PRIR+ + Sbjct: 270 IDSILAKDIPMVQGIIVLIATSYAVVNLLVDLAYVLMDPRIRYGR 314 >UniRef50_A6UJW3 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Rhizobiales RepID=A6UJW3_SINMW Length = 311 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 119/340 (35%), Positives = 198/340 (58%), Gaps = 31/340 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA--GERGISPERHAQLLAELGL 58 ML+F LRR +IPT + + +L F ++PG + G+R P+ A+L E GL Sbjct: 1 MLRFTLRRTLQIIPTVVVVAMLIFVIFSVVPGTFAASLFADGKRAADPQMIARLNEEFGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +KP+ +++ Y+ + DLG S ++R PV + R A+L+L + AM FA VG+P+G Sbjct: 61 NKPLMERFATYVTDLAQFDLGTSFRTRQPVIDLINDRIWASLQLAIAAMAFALVVGVPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LAA++ GS+ D + A++G SMP FW G++++ + ++ N P G Sbjct: 121 FLAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYIFALQLNWLPSFGYGDG------- 173 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + ++ILPA+ LG PLA++ R TR+ +L+VL D+IR Sbjct: 174 ----------------------SFRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIR 211 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA +KG++ +V+ H RNA++ +VT +GLQ G+L+ A++ E +F+WPG+G L+D++ Sbjct: 212 TAHSKGMSEAKVVRWHVARNALVLIVTTLGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSV 271 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQG +L++ +++N VDL+Y ++PRI+ + Sbjct: 272 ASRDIPVVQGTILIIVLWFLVINTAVDLIYAAIDPRIKQE 311 >UniRef50_C1DVB5 Oligopeptide transport system permease protein AppB n=6 Tax=Aquificales RepID=C1DVB5_SULAA Length = 328 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +IL+RL +IP +GIT L+F + M PGD + + IS +L GLD+ Sbjct: 1 MILYILKRLLQMIPLIVGITFLSFVIIQMAPGDYLDQLRMNPQISESTIEKLKQTYGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + DLG S +PV + R TL L + + + A + +P+G++ Sbjct: 61 PILIQYFKWLSNALLFDLGFSFSYNMPVLDLIKDRVPNTLFLSITSGLLAWLLAVPLGII 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++ SI D + T S+P ++ L++ +V L P G S Sbjct: 121 AALRPNSIIDRFIQVFSFTFMSLPS-FFLAFLLLFFAVKTGLLPTGGATSPGYESMPF-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D + H+ LPA VL LA +VR+ RS+M+E L +Y+ A Sbjct: 178 --------------WEKVLDRLWHVSLPAFVLAITSLAGLVRLVRSAMIEALQSEYVLFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLT +V++ HALRNA+ P +T++G ++ +LL+GA L E I +WPG+G ++DA+ Sbjct: 224 RAKGLTEKQVVLKHALRNALNPFITILGFEIASLLSGAALVEIIVNWPGMGMLMLDAVLS 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +D +V GG+ + + M+I+ NL+ DLL ++PRIR ++ Sbjct: 284 QDLYLVMGGLYIGSIMLIIGNLIADLLLAKLDPRIRQRE 322 >UniRef50_Q28NH1 Binding-protein-dependent transport systems inner membrane component n=56 Tax=Proteobacteria RepID=Q28NH1_JANSC Length = 338 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 194/339 (57%), Gaps = 10/339 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +ILRR+ I + + L+ FA + GDPV M G+ + E +L LGL+K Sbjct: 1 MLSYILRRVFQSILVLLVVGLVAFAMFRFV-GDPVDTMLGQER-TMEDVERLREVLGLNK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ + GD GIS + PV E R ATLEL + + + A GI +G+ Sbjct: 59 PFFLQYWDFLVRAVQGDFGISYRQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A++R + + + ++L G S+P F G++LI V ++ R+ ++ Sbjct: 119 TAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDI-----RIPFTDTTFNTGG 173 Query: 181 LTGFMLIDTA---IWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + F DT W D V +ILPAI LG + +I+R+ R+ MLEVL DYI Sbjct: 174 MPTFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYI 233 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 R ARA+GL+ + HAL+N M+PV+TV GLQ+G+++A AI+TET+F WPG+G I+A Sbjct: 234 RFARARGLSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINA 293 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +Q D PV+ ++L++ M + +NL VDLLY ++PR+R Sbjct: 294 IQFVDIPVMAAYLMLISVMFVGINLAVDLLYVAIDPRLR 332 >UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICR7_9EURY Length = 352 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 129/342 (37%), Positives = 196/342 (57%), Gaps = 11/342 (3%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPE--------RHAQLLAE 55 +I+RRL I IGITL+TF +H +P D + AG +P + Sbjct: 6 YIIRRLIFTIFIIIGITLITFILMHALPVDLAAMYAGNPRDNPATEVNEAEMMLKAAREK 65 Query: 56 LGLDKPMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 GLDKP+W QY +Y++ + + D+GISM++ PV EE + R ATLEL +++ A G Sbjct: 66 FGLDKPLWVQYGYYLYNLFLKFDMGISMRTHKPVGEEIINRLPATLELIFVSIVIAFVAG 125 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 + VGV++A K+ DH ++++G S+P FW ++L + P+SGR +F Sbjct: 126 VAVGVISAKKQNKFTDHIMRIISISGVSLPAFWLAILLQFIFGSWMGWFPISGRYDPQLF 185 Query: 175 -LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 + +TGF LIDT + G F D H+ILP+I + + P I RMTR+++LEV+ Sbjct: 186 HQYPFHTITGFYLIDTLVQGNFKMFGDVAWHLILPSIAMASYPFGAIARMTRATLLEVMD 245 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 E YI +ARA GL R+I +AL+NA+ P +T+ GL +L GA E IF W G+G + Sbjct: 246 EQYIYSARAMGLP-KRLITKYALKNALGPTLTITGLNFAYMLTGAFYVEWIFGWGGIGWF 304 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 AL DY V+ G V++V+ ++VNL+VD++ ++PRI Sbjct: 305 AGMALLNLDYTVIMGMVVVVSLFYVIVNLIVDIIQVYIDPRI 346 >UniRef50_Q28M48 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Bacteria RepID=Q28M48_JANSC Length = 335 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 123/356 (34%), Positives = 187/356 (52%), Gaps = 39/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F +RRL L IPT I I+ + F V + P DP + I PE + LG++ Sbjct: 1 MLTFTIRRLILAIPTLIFISFIIFLIVKLSPSDPTAGL--PLTIPPEVREAIRESLGVND 58 Query: 61 PMWQQYLHYIW--------GVMHGDLGI----------SMKSRIPVWEEFVPRFQATLEL 102 P++ QY ++ +M G G S ++R PV + + R TL + Sbjct: 59 PVFVQYFKWLKLMMWDEPLHLMDGWFGTEMAPDGPRIISYQTRSPVMDLIMQRMPQTLWV 118 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 + I + +P+GV++A ++ S FD +++ G+S+P F+ G++ I++ +V+ Sbjct: 119 VGTSYIVGILIAVPLGVISAYRQYSWFDQIGTFVSMIGFSVPTFFTGVLFIVIFAVNLGW 178 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 P + T F + MI+P +VLG + I R Sbjct: 179 FPS-------------------VYDTTLEVTNWETFWTQIRQMIMPVMVLGLFNASQISR 219 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 R+SML+ L +DY+RTARAKGL V++VH LRN+M+PVVTVI L V + GAI+TE Sbjct: 220 YMRASMLDNLNQDYVRTARAKGLGESVVVLVHVLRNSMIPVVTVIALNVPAVFGGAIITE 279 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +F G+G+ LI A+Q D PVVQ + A +I+L NLL D+LYGV++PRIR+ Sbjct: 280 QVFKVNGIGQLLIIAIQAGDVPVVQTVSFIFAILIVLFNLLADILYGVLDPRIRYD 335 >UniRef50_B2Z3S7 ABC transporter permease protein n=3 Tax=Rhizobiales RepID=B2Z3S7_AGRRK Length = 310 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 196/339 (57%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFIL +L T + F + + GDPV +M + PE A+ A GLD+ Sbjct: 1 MAQFILIKLSRAFLTLLLAVTFVFVVLRLS-GDPVSMMLPDD-TPPEIVAEYRAAWGLDR 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY+ +IW +HGDLG S + P V R TL LG+ + VG+ G+ Sbjct: 59 SLPEQYVRFIWSALHGDLGYSFRDDRPAVTVVVERVPMTLLLGLSSFAITVVVGLLAGIA 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRG+ DH + ++ G+S+P F+ +++IML S+ W L P SG + Sbjct: 119 AALKRGTSVDHVVMAFSIFGHSIPNFFLAILMIMLFSMSWRLLPSSGGTT---------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +H++LPA+ LG I + R TRSSMLEVL + Y+RTA Sbjct: 169 ---------------------WSHLVLPAVTLGIINAGTVARFTRSSMLEVLHQPYMRTA 207 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL R I+ HA+ NA +P+VTV+GL++G L+AG+++ ET+++WPG+G L++A+ + Sbjct: 208 RAKGLRLTRRIMSHAIPNAAIPIVTVLGLRLGGLIAGSVVIETVYAWPGIGLMLVNAVSQ 267 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD PVVQ VLLVA +++ N +VD+ YG ++PRI +++ Sbjct: 268 RDLPVVQTIVLLVALTMVVTNFIVDITYGWLDPRIENRR 306 >UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizobiales RepID=Q989T3_RHILO Length = 314 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 195/337 (57%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ R+ +IP +T + F ++ PGD +++AG+ SP + A + L LD Sbjct: 1 MIRYLITRMLSIIPVMGVVTAVVFGLTYLSPGDAAVVLAGDYA-SPAQIAAIRERLHLDA 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY H++ V+ GDLG S+ S PV + R + T+ L + A + + + +P+G+L Sbjct: 60 PIVPQYFHWLGSVLRGDLGNSIFSEQPVLALILSRVEPTIILAIAATLVSVIIAVPLGLL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG I D + G ++P F G +LI V++ P+SG Sbjct: 120 AARKRGGIADQLVSFFGIAGTAIPAFLIGYLLIFTFGVYFGSMPISGFP----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G D + + H++LPA +LG A+I R+TR+S +EVL +D+IR A Sbjct: 169 ------------GLDSGAWEVLRHVLLPATMLGFAQTALITRITRASAIEVLNQDFIRVA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +I+ H LR +P+VT++G+ +L G ++TET+F+ PG+GR L+DA+Q Sbjct: 217 RAKGLDEFTIIMRHCLRLIAVPLVTIVGMSFAYMLGGVVITETVFAIPGVGRLLVDAIQH 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +D PV+QG +L+ + + +L+NL+VDL Y +PRI++ Sbjct: 277 KDVPVIQGVLLISSFVYVLINLMVDLSYLFFDPRIKY 313 >UniRef50_A6X471 Binding-protein-dependent transport systems inner membrane component n=11 Tax=Alphaproteobacteria RepID=A6X471_OCHA4 Length = 327 Score = 336 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 177/338 (52%), Gaps = 18/338 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDK 60 L F LRR+ IP + I + +F + + PGD V + G+ G P+ A L E GLD+ Sbjct: 7 LTFALRRILQAIPVILLIMIGSFLLIKLAPGDTVDALVGDMGGADPQFVANLRTEYGLDQ 66 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W Q Y+ + D G S PV + + R TL L V ++ A GI +G Sbjct: 67 PVWTQLWIYMTKLAQFDFGWSYVYEQPVLDVLMARLVPTLLLMVSSLSVAFIFGIALGAF 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + S+ D+ L L Y+MP F+ ++L+ + SV PV G + Sbjct: 127 AARRAYSLTDNAISTLGLVFYAMPSFFLSLILMFIFSVKLGWLPVGGYKTI--------- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + N D H+++P L I LA +R+ R+S+LEV DY+RTA Sbjct: 178 --------AGFYTGWKNVWDIAVHLVMPTTALSLIYLAFYMRLMRTSVLEVADLDYVRTA 229 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG + R++ H +RNA LPVVT++GLQ T+L G+++ ETIFS PGLG+ ++ + Sbjct: 230 RAKGASGARLMFHHIMRNAFLPVVTLLGLQFSTVLGGSVVIETIFSLPGLGQLAYTSVIK 289 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD + G + L + ++++VN + DL+Y ++ RI Sbjct: 290 RDLNTLMGIIFLCSVLVVIVNFITDLIYARLDSRIELS 327 >UniRef50_C5ET18 Oligopeptide transport system permease protein appB n=2 Tax=Clostridiales RepID=C5ET18_9FIRM Length = 315 Score = 336 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 194/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + +PT IGIT++ +A + G P+ +M G R IS A A LGLDK Sbjct: 1 MTKYIIKRLLIALPTLIGITIIDYAIMCFA-GSPLEMMQGAR-ISQAAVAAKEAALGLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++ G++G S+KS V TL L ++I + + +P G+ Sbjct: 59 PFYIQYFMWLGQLLQGNMGFSIKSYEAVGSMIGSHLGPTLLLMGVSLIVSLIMSVPAGIY 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+ V + G S+P F+ ++L+ + +V + P G V+ Sbjct: 119 SAIHQYSKGDYAVVTASFFGSSIPGFFLSLLLVYIFNVTLGILPSGGMVTL--------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D AHM++P +VL +R RS++LE+L +DY+RTA Sbjct: 170 ------------GTAGGAGDVAAHMVMPVLVLSVSMAGTNIRYIRSAVLEILQQDYLRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R VI HALRNA++P+VTVIG+Q+ L GA++ E +FSWPGLG + A+ Sbjct: 218 RAKGIGRRLVIYKHALRNALVPIVTVIGMQIPVLFGGAVIVEQLFSWPGLGLMTMSAILN 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G LL A +++L NL+ D++Y VVNP I+++ Sbjct: 278 RDYPVIMGVCLLSAVVVLLANLVTDIVYAVVNPAIQYE 315 >UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9ADY0_RHIRD Length = 324 Score = 336 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 190/336 (56%), Gaps = 24/336 (7%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDKPMW 63 + R+L + + L F+ ++++PGDPV+++ G + SPE A + A+LGLD+P+ Sbjct: 11 VARKLLTAFIQLLVVATLIFSVMYIMPGDPVLLLLGADSNPSPEAIASMRAQLGLDQPVI 70 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY ++ +H D G S+ + PV + TLEL A+I A +G+P+G+ AA+ Sbjct: 71 SQYFVWLRNALHLDFGKSLTNGYPVANYVMQNLPRTLELAFAAIIIAALIGVPIGIAAAL 130 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 KRGS D +A G S+P++ G +L++ SV P SG Sbjct: 131 KRGSTRDTVLTSIATIGISVPVYIVGTLLVLFFSVKLGWLPASGYTDISR---------- 180 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 N ++ + LPA LG A I RMTRSS+LE+LG D++R RAK Sbjct: 181 -------------NVLEHFRKLALPAFALGFGLAASIARMTRSSVLEILGRDFVRALRAK 227 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G+ R+I H RNA +P VT+IGLQ+G L+ G +L E +F+WPGL L+ A+ R+Y Sbjct: 228 GMPERRIIWQHVFRNAAIPNVTIIGLQLGNLMGGTVLVEAMFNWPGLSTLLVGAVSARNY 287 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 P+VQG +L +A IL+NL+V+LLY +++PRIR K Sbjct: 288 PLVQGSMLAIAAAFILINLIVELLYSLLDPRIRRKS 323 >UniRef50_Q6MQU8 Peptide ABC transporter, permease protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQU8_BDEBA Length = 343 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 105/356 (29%), Positives = 180/356 (50%), Gaps = 37/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA--------------------- 39 M+ +++RRL L+IPTF GIT++TF +++ PG P+ Sbjct: 1 MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSR 60 Query: 40 GERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQAT 99 G+ ++ E L + G DKP+ ++Y+ ++ + D G S + PV + +F + Sbjct: 61 GDSAVNEEVIEALKKQYGFDKPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVS 120 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH 159 L+ G+ ++I V IP+GV A+K G FD + YS+P G+ LI++ + Sbjct: 121 LQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNLTYSIPPLVLGIFLIVVFAGK 180 Query: 160 WNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAV 219 N+ P+ G SD D + G +D H +LP I Sbjct: 181 LNMFPLGGLHSD----------------DYEVLTTWGKIVDRAHHFVLPLICYMIGGFTE 224 Query: 220 IVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAI 279 + + R+SML+V+ D++RTARAKGL+ VI HALRNA++P+ T +G G LAG++ Sbjct: 225 LSTLMRNSMLDVVKSDFVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSL 284 Query: 280 LTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 + E +F+ G+G ++ RDY V+ G + + +++ + D++Y +++PRI Sbjct: 285 IIEQMFNLDGIGLLGYQSIMARDYNVIMGLTFISSLLLMFGRIFSDIIYVLIDPRI 340 >UniRef50_A9BP21 Binding-protein-dependent transport systems inner membrane component n=53 Tax=Proteobacteria RepID=A9BP21_DELAS Length = 355 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 20/335 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+L+RL ++ T +G + + F + ++PG+ + G PE L +LGLD+ Sbjct: 36 MSIFLLKRLLMLAATLLGASAVVFGVLEVLPGNAAQTLMGPDAA-PEAVHALAVQLGLDQ 94 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P WQ+YL ++ G++HGD+G+S PV E + R T L V AM+ T + + G+ Sbjct: 95 PAWQRYLQWLQGLLHGDMGLSYAYSTPVSELVLERLAVTAPLAVMAMLITTVLALAAGIY 154 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + D +GLA G ++P FW+ ++LI++ SV G Sbjct: 155 AASRHNRWGDLGIMGLAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFPGWSEADGGGPL 214 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L+ A I L + A++ R+TRS++LEVL ED++RTA Sbjct: 215 QALQALLLPA-------------------ISLAVVQAAILARITRSAVLEVLREDFVRTA 255 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+R V+ H LRNAM+PV+TV+GLQ LLAG I+ E +F PGLGR + ++ Sbjct: 256 RAKGLSRRAVLWGHVLRNAMIPVLTVMGLQFAQLLAGTIVVENVFYLPGLGRLIFQSIAN 315 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD VV+ VLL+A M++++N +VD+LY ++PRI Sbjct: 316 RDLIVVRNCVLLLAAMVVVINFIVDVLYAAIDPRI 350 >UniRef50_Q1GIR9 Binding-protein-dependent transport systems inner membrane component n=20 Tax=Alphaproteobacteria RepID=Q1GIR9_SILST Length = 335 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 116/356 (32%), Positives = 191/356 (53%), Gaps = 39/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F +RRL + +PT + I+L+ F + + PGDP+ + + PE ++ LGL + Sbjct: 1 MLTFTIRRLIIAVPTLLFISLVIFLLLELAPGDPMAQV--PLTVPPEVKEKMRLALGLGE 58 Query: 61 PMWQQYLHYIWGVM-----------------HGDLGI-SMKSRIPVWEEFVPRFQATLEL 102 P+ ++ ++ GDL + S ++R PV + V R TL + Sbjct: 59 PVHIRFWKWLVQFFWIEPQVLIDHIFGTSFSAGDLRVISWQTRSPVMDIVVQRLPQTLWV 118 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 A I A + +P+G+ +A ++ S FD +++ G+S+P F+ G+++I++ SV Sbjct: 119 VGTAYIVAILIALPIGIYSAYRQYSWFDQMGTFVSMVGFSVPPFFSGVLVIVIFSVQLGW 178 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 P + T F+ + M++P +VL A + R Sbjct: 179 FPS-------------------IYDTTLEVNSWETFVKQLQQMVMPVMVLALQITAQLSR 219 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 R+SML+ L +DY+RTARAKGL V++VH LRN+M+PVVTVI L + ++ GAI+TE Sbjct: 220 FMRASMLDNLNQDYVRTARAKGLGEYTVVMVHVLRNSMIPVVTVIALGIPSIFGGAIITE 279 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +F G+G+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 QVFKVNGIGQLLIGAIQANDLPMVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 335 >UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bacteria RepID=A6Q8P1_SULNB Length = 317 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 194/338 (57%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ RL + ++ + F ++ GDP+ ++ + + AQ+ LGLD Sbjct: 1 MIRYVISRLFNSFLVMLAVSFIAFFIMYKA-GDPLQLLLPPDA-TAQEVAQMRHTLGLDG 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 QY ++ + HG+LG S P + + R ATLEL + AM + +G+P+GV+ Sbjct: 59 SFLTQYKSFMIQLSHGNLGNSFIYGEPALDIVLERLPATLELAILAMGVSILLGVPLGVI 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +++ S+ + +LTG S+P+FW GMML+++ SV + + P SGR +F Sbjct: 119 SSMDPDSLKSKAIMLFSLTGISIPVFWIGMMLVLIFSVVFEILPSSGRGEVYLFSSVFT- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+I+P L LA+I+R+T+S M EVL EDY++ A Sbjct: 178 ------------------WDGIKHLIMPVTTLSLFQLALIIRLTQSGMREVLTEDYVKFA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HA +N +LP++TVIG+Q G L+A I+TETIF+WPG G+ +ID++Q Sbjct: 220 TAKGLPRKVIVYRHAFKNTLLPLITVIGIQFGQLIAFTIVTETIFAWPGTGKLIIDSIQN 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D PVV +L+VA + IL+N +VD+LY V+PR+R Sbjct: 280 LDRPVVIAYLLVVALIFILINFIVDILYTWVDPRVRLS 317 >UniRef50_C7Q863 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Actinomycetales RepID=C7Q863_CATAD Length = 355 Score = 336 bits (863), Expect = 8e-91, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 184/341 (53%), Gaps = 22/341 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+++L RL + + + +F ++PGDPV + G +S + A L + G+DKP Sbjct: 33 LRYVLGRLIGAAVSMLAVVFTSFFLFRVVPGDPVRALTGGHPVSAAQMATLRHQFGIDKP 92 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ Y V+ GDLG S + + PV AT+ L A + A +G+ +GV + Sbjct: 93 LIAQFGDYAGRVVRGDLGTSYQYKRPVSGLIGSHVWATVYLVGTATLIAALLGLRIGVRS 152 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW----NLTPVSGRVSDMVFLDD 177 A K GS D + G+AL +SMP FW ++LI++ V + L P G S V Sbjct: 153 AWKHGSRSDRASTGIALVLWSMPTFWLALILIVVFGVGFGPIPGLFPTGGMNSPDVH--- 209 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 G D + H++LP + L + A + R+++LE +G DY+ Sbjct: 210 ---------------GLFPVIWDHLRHLVLPCLTLVAVVYAQYLLTMRATLLEEVGADYL 254 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 TARAKGL V HA+ NAMLP VT++ L +GT ++G+ILTET+FSWPGLG +A Sbjct: 255 TTARAKGLREDDVRRKHAVPNAMLPAVTLVFLNLGTAVSGSILTETVFSWPGLGSLFYEA 314 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L D P+++G + A +I++NLL +LLY +++PR+R Sbjct: 315 LTVPDLPLLEGLFIFFAAAVIVMNLLAELLYPILDPRVRTS 355 >UniRef50_Q11BX9 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BX9_MESSB Length = 319 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 124/341 (36%), Positives = 189/341 (55%), Gaps = 25/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGL 58 ML+++L RL L IPT +G+ LTF + ++PGD V M G +PE A A LGL Sbjct: 1 MLRYLLNRLMLAIPTLLGVATLTFFMLALLPGDAVETMLRADGGNPTPEIIAAERARLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+ Q+ ++WG+ GDLG S + PV +E + R TLEL V MI A + +P+G Sbjct: 61 DRPILVQFGDFLWGLFTGDLGSSSWTGKPVLDEIMLRLPVTLELAVLGMIIAVVIALPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LA + G+ D+ A G ++P FW GMML + + +N P G S Sbjct: 121 TLAGIFHGTWLDNLIRIFAFGGIALPSFWLGMMLALAMLWFFNWLPPLGSNSLFSDP--- 177 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 I + + LPA+ +G A++VRM R+S++E + EDY+R Sbjct: 178 --------------------IRVLQQLTLPALAVGYRYAAMLVRMMRASVIEAMSEDYVR 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL ++ H + N++LP VT+IGL+ ++ ++ E +FS GLGR ++++ Sbjct: 218 TARAKGLPASSIVRRHIVPNSLLPTVTIIGLEFALMVGSLVVIEQVFSLNGLGRLFVESV 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R D V+QG V+++ + I +NLLVDL Y ++PRIR + Sbjct: 278 ARSDLIVIQGIVVVLTIIFIAINLLVDLAYAAIDPRIRLGR 318 >UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteobacteria RepID=A8IB88_AZOC5 Length = 335 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 195/338 (57%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ +P +G++L+ FA +H+ PGDP+ + G SPE AQ+ A G D+ Sbjct: 19 MLVYVLRRILYTVPIALGVSLVCFALIHLAPGDPLSAII-PEGASPETVAQVRAAYGFDR 77 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ V+ GD G S+ ++ PV E +P TL L A++F A G +GV+ Sbjct: 78 PLPVQYLKWLQHVVMGDFGNSIMTQRPVMAEVLPALANTLMLAAAAVLFGFAAGCLLGVV 137 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + G D +++TG S+P +W GM+L+++ +V NL P +G Sbjct: 138 SGYLAGKPTDKAVTAVSITGVSIPHYWLGMVLMVIFAVELNLLPATGM------------ 185 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D++ ++ILPA+ L IP +I R R ++ EV +D+++T Sbjct: 186 -------GEGGSGAFGFGWDSLQYLILPALTLSVIPAGIIARSVRGTIAEVRKQDFMQTL 238 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R+ VH ++NA+ V+ V+GLQ+ LL G+IL ET+FSWPG G L +A+ Sbjct: 239 HAKGLPGRRI-FVHVVKNALPAVLAVMGLQLAQLLGGSILVETVFSWPGTGFLLNNAIFT 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QG +L++A +L+NL VD++ V+PRI+ Sbjct: 298 RDLPVLQGTILVLAMFFVLINLAVDVVQTAVDPRIKRA 335 >UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID=B5GK78_9ACTO Length = 324 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 139/335 (41%), Positives = 199/335 (59%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++ RRLG+ + T + +++ F V +PGD +AGE+ SPE A + E GLD Sbjct: 9 TSYLARRLGMSLVTMVLVSIAVFLGVRAMPGDTAQALAGEQ-TSPEVLASIRQEYGLDDN 67 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY Y+ + GDLG S ++ +PV + TLEL A++ A VGI GVLA Sbjct: 68 IAVQYWRYLSHAVTGDLGTSARTGLPVLDSIREALPITLELAALALLLAVVVGIGAGVLA 127 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV++G + A G+AL G S+P FW G++L++ ++ + SG V Sbjct: 128 AVRKGKPSEWLANGIALLGMSVPSFWLGIILVLAFAIATPVFAASGFVPFGTDP------ 181 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 ++ + ++LPAIVLG+ AV++R TR++ML+ L DY RTAR Sbjct: 182 -----------------LENLRRLVLPAIVLGSGLAAVVMRQTRAAMLDSLSADYTRTAR 224 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGLTR +VI HALRN+++ VVTV+GLQ+G L++GA++TE +F PG G+ IDA+ R Sbjct: 225 AKGLTRRQVIGGHALRNSLVTVVTVLGLQLGQLISGAVVTEQVFVLPGFGKLTIDAVFTR 284 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DY +VQG VL + ILVNLLVD LY VV+PRIR Sbjct: 285 DYAMVQGVVLFTSAAYILVNLLVDFLYSVVDPRIR 319 >UniRef50_A8M8L4 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Actinomycetales RepID=A8M8L4_SALAI Length = 319 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 187/338 (55%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++ RLG + + +T++ F +H++PG G+ + E+ A E+G D+ Sbjct: 1 MARYLITRLGQALIVVVLVTVIAFLILHLLPGGAARATLGKEA-TLEQLAAFNHEMGYDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY Y+ ++ GDLG S + V E R T+ L + + + A + IP+GVL Sbjct: 60 PLIQQYGMYVQRLLQGDLGYSYQLNQSVLEAIEQRLPKTMVLSLLSTLLAVVLAIPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV+R D+ L+L Y+ PIF+ G+M+I++ S W + P V ++P Sbjct: 120 QAVRRNRWPDYAITALSLLAYATPIFFLGLMMIIVFSQVWPILPPEAPQGFTVAEVLADP 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++LP L + +AV R RSSM++ L E+Y+RTA Sbjct: 180 AG----------------------LVLPTATLAIVTIAVYARYVRSSMIDNLNENYVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL+ RV++ H LRN + PV+T++G+ + L +GA++ E++F++PG+G+ A + Sbjct: 218 RSKGLSERRVVLRHTLRNGLFPVITLLGMYLPALFSGALVVESLFNFPGMGQLFWQAALK 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++ G ++++ ++ L+ DLLY V+PR+R + Sbjct: 278 RDFPILLGVTVIISIATVVGALIADLLYATVDPRVRLR 315 >UniRef50_P24138 Oligopeptide transport system permease protein oppB n=79 Tax=Firmicutes RepID=OPPB_BACSU Length = 311 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 125/340 (36%), Positives = 185/340 (54%), Gaps = 35/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RRL +I T I +TF + PG P GE+ + PE A L A GLDK Sbjct: 1 MLKYIGRRLVYMIITLFVIVTVTFFLMQAAPGGPFS---GEKKLPPEIEANLNAHYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P++ QY+ Y+ V D G S K V + F + LG A++ A A+G+ GV Sbjct: 58 PLFVQYVSYLKSVAMWDFGPSFKYKGQSVNDLISSGFPVSFTLGAEAILLALALGVLFGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+ D+T L + G S+P F +L + S+ L PV+G Sbjct: 118 IAALYHNKWQDYTVAILTIFGISVPSFIMAAVLQYVFSMKLGLFPVAG------------ 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+ A+ LP+I L ++P+A I R++RSSM+EVL DYIRT Sbjct: 166 -------------------WDSWAYTFLPSIALASMPMAFIARLSRSSMIEVLNSDYIRT 206 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKGL+R V + HA+RNA+LPVVT +G +L G+ + ETIF PGLG ++++ Sbjct: 207 AKAKGLSRPAVTVRHAIRNALLPVVTYMGPMAAQVLTGSFIIETIFGIPGLGAHFVNSIT 266 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ G + + +++L L+VD+LYG+++PRI+ K Sbjct: 267 NRDYTVIMGVTVFFSVILLLCVLIVDVLYGIIDPRIKLSK 306 >UniRef50_Q3J951 ABC transporter, inner membrane subunit n=9 Tax=Bacteria RepID=Q3J951_NITOC Length = 309 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+L RL +G+ L F +H IPGDPV ++ GE G P L LGLD+ Sbjct: 1 MGYFLLSRLLSAAVVVLGVACLVFLLIHFIPGDPVEVILGE-GARPADREALRQALGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q ++ G+ DLG S+ S+ PV E R AT+EL + A++ A + P+GVL Sbjct: 60 PLLVQLSQFLQGLAQLDLGTSLYSQRPVMELLAERLPATVELALAALLVAILIAFPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RG+I+D A AL G S+P FW G MLI++ S+ PVSGR Sbjct: 120 AAVRRGTIWDRAASAFALLGVSVPNFWLGPMLILIFSIGLGWFPVSGRA----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ ++LPA+ LG+ A++ RM R+++LEVLGEDYIRTA Sbjct: 169 --------------------GLSSLVLPALTLGSALAAILSRMVRAALLEVLGEDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+ RVI H LRNA+LP++TV+GLQ+G LL GA++TE +FSWPG+G+ I+++QR Sbjct: 209 KAKGLSARRVIWWHGLRNALLPLITVLGLQLGALLGGAVITEVVFSWPGIGQLTIESIQR 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPVVQG VLL++ + VN L DL+YG +PR+R Sbjct: 269 RDYPVVQGCVLLISLTYVAVNTLTDLIYGWADPRVR 304 >UniRef50_D0RFR0 Binding-protein-dependent transport system inner membrane component n=2 Tax=Brucella sp. F5/99 RepID=D0RFR0_9RHIZ Length = 340 Score = 334 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 181/342 (52%), Gaps = 21/342 (6%) Query: 16 FIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMH 75 + + +LTF + ++PGDP +++AG+ G SPE ++ ELGLD+P Q ++W + H Sbjct: 1 MLIVAILTFLLMKLLPGDPAILIAGD-GASPETVERIRVELGLDQPTVVQLGQWLWNLFH 59 Query: 76 GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVG 135 DLG S PV + R T+ L + A VGI +GV+AA R S FD + Sbjct: 60 FDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVVAAYLRDSWFDTGVMS 119 Query: 136 LALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGED 195 LAL G S+P FW ++ ++L SV P +G V + + + + Sbjct: 120 LALLGVSVPSFWLAILAVILFSVTLGWFPSAGYV-PFLDSPLGWLRSLILPASILALFQI 178 Query: 196 GNFIDAVAHMILPAI-------------------VLGTIPLAVIVRMTRSSMLEVLGEDY 236 G +L + +L + + RMTRS MLEV+ +DY Sbjct: 179 GYLARMTRSEMLEVMDQDYIRTARSKGVSEYSVSILALFQIGYLARMTRSEMLEVMDQDY 238 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTAR+KG++ V+ HA RNA++ V+TV G L+ G+++ E IF+ PGLGR L+ Sbjct: 239 IRTARSKGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQ 298 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ RD PVVQG +L + + + +N+LVD+LY + +PR+R+ Sbjct: 299 AILARDLPVVQGTMLFLGFLFVAINVLVDILYTIADPRVRYD 340 >UniRef50_Q3IPR7 ABC-type transport system permease protein (Probable substrates dipeptide/oligopeptide/nickel) 3 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPR7_NATPD Length = 315 Score = 334 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 119/336 (35%), Positives = 175/336 (52%), Gaps = 34/336 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELGLD 59 ++ RRLG + T I++LT+A + + PGDP + + E+ E GLD Sbjct: 4 RYAARRLGTALVTLFFISVLTYALIFIAPGDPAEASLRAQLGEQPTQEQIEIFRVEHGLD 63 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P QY ++ ++ GDLG S V E R TL L M A V +P GV Sbjct: 64 EPFHVQYASWVADLLQGDLGESYYHERSVAELIGDRLPTTLALAAGGMGVALLVSVPTGV 123 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AV+ DH + AL G +MP FW G +LI L ++ L PVSG Sbjct: 124 ASAVRPNGYIDHASQLFALVGVAMPNFWLGYLLIFLFAITLGLVPVSGTG---------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + ++LP+I LGT AV R+ RS++L+VL +++ Sbjct: 174 ---------------------GLRSLMLPSITLGTGLAAVQTRLLRSALLDVLDHEFVDA 212 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 +RA+GL V+ HALRNA++PV+TV+GLQ+G + GA++ E +F PGLG L++A+ Sbjct: 213 SRARGLGERVVVYKHALRNALVPVITVVGLQLGMAINGAVIVEVVFQRPGLGALLVEAVF 272 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYPVVQG LL I+VN+ D++Y ++PRI Sbjct: 273 DRDYPVVQGVTLLAGATFIVVNVATDVVYRRLDPRI 308 >UniRef50_C0AEM4 Nickel-transporting ATPase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEM4_9BACT Length = 328 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 190/362 (52%), Gaps = 58/362 (16%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +FI RRL IP I +TF + +PG P E+ +S E L A GLDK Sbjct: 1 MFRFIARRLLETIPVLFVIVTVTFFMLRFVPGGP---FTSEKAVSKEILRNLEAHYGLDK 57 Query: 61 PMWQQYLHYIWGV-----------------------MHGDLGISMKS-RIPVWEEFVPRF 96 P+ QQYL+Y+W + + DLG S K V E + Sbjct: 58 PLHQQYLNYLWDLCPKKFDPRVFFGEHNSGLDLKAALGIDLGPSFKYPNRTVNEIIAQKL 117 Query: 97 QATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLV 156 +LELG A++ A +G+ +GV AAV++ S+ D+ A +A+ G +P F G +L++L Sbjct: 118 PVSLELGGWALLIALTLGVTLGVAAAVRKNSLADYAASTVAMIGICVPTFVLGPLLVLLF 177 Query: 157 SVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIP 216 ++H P SG + +LPA+ LG + Sbjct: 178 AIHLGWLPPSGWYGPVDR-------------------------------VLPALTLGLVY 206 Query: 217 LAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA 276 A I R+TR MLEVL +DYIRTARAKG + +R+++ HALR +LP+V+ +G + +++ Sbjct: 207 AAYIARLTRGGMLEVLNQDYIRTARAKGASELRIVLKHALRGGLLPLVSYLGPAIAGVIS 266 Query: 277 GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 G+ + ETIF PGLGR + ++ RD+ +V G VLL A +I+L+NLLVD++ +NP+++ Sbjct: 267 GSFVIETIFQIPGLGREFVTSVFNRDFTLVLGTVLLYAALIVLLNLLVDIVQVWLNPKLK 326 Query: 337 HK 338 + Sbjct: 327 FE 328 >UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 Tax=Actinomycetales RepID=A0R0E2_MYCS2 Length = 325 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 123/337 (36%), Positives = 191/337 (56%), Gaps = 24/337 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++F+ +RL +G+ ++ F VH++PGDPV I G R +PE + L G+D+P Sbjct: 13 VRFLAQRLLYSAVVLVGVLIVVFTLVHLVPGDPVRIALGTR-YTPEAYEALRTASGMDRP 71 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +Q+ YI + GDLG+S ++ PV + R ATL LG+ ++ A + IP G+ + Sbjct: 72 IVEQFFGYIGSALTGDLGVSFRNGDPVTVTLLERLPATLSLGLVGILIALVIAIPAGIWS 131 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A++ G + D + G S+P F G++LI L + P SG Sbjct: 132 ALREGRVSDAIVRVASQFGVSIPDFRLGILLIGLFASVLGWLPTSGYRPLFDDPGG---- 187 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + H+ILP + +G + A++ R RS++LEV Y+RTAR Sbjct: 188 -------------------WLRHIILPGLTVGLVAGAILTRYVRSAVLEVAAMGYVRTAR 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL V H +RNA+LPV+T+ G+Q+ T+L G I+ E +F+WPGLGR + +++ R Sbjct: 229 SKGLPPPVVTFRHIVRNALLPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVFNSVAAR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+QG VLL+A + +L+NLLVD+LY VV+PRIR Sbjct: 289 DYPVIQGAVLLIAVLFLLINLLVDVLYAVVDPRIRLS 325 >UniRef50_A9BGI2 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Thermotogaceae RepID=A9BGI2_PETMO Length = 326 Score = 333 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 17/337 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I+RRL L IP +G+++++F + + PGD + IS E+ +L GLDK Sbjct: 4 LKYIIRRLILAIPVLLGVSVISFFVMQLAPGDFLDTYRINPNISREQIQELERLYGLDKN 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY ++ +M GD G S +I VW+ + R +ATL LGV IF +GIP+G+ A Sbjct: 64 PVTQYFLWLGNIMKGDWGYSFVYKIDVWQVMLRRLEATLLLGVTTFIFTWGIGIPLGITA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ + D L L G S+P F++ ++ +M S + + P+ G +S Sbjct: 124 ALHQYKFTDQALSTLGLIGLSIPNFFFALLWLMW-SANTGIFPIGGMLSREFANLP---- 178 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D H+ P + LGT LA +R+ R +L+ + +DY AR Sbjct: 179 ------------WYKQIGDFFWHVAGPVVTLGTASLAGTMRVMRGQILDEMNQDYAEFAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+ VI H LRNA+ PV+T +G + ++L GA++TE +FSWPGLG + DA+ ++ Sbjct: 227 AKGMPSDVVIYKHTLRNAINPVITSLGFSLSSILGGALITEYVFSWPGLGTLMRDAIFQQ 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D +V + L ++I NL+ D+L +PR+R + Sbjct: 287 DIYLVMANLFLQGILLITGNLIADILLAASDPRVRLR 323 >UniRef50_A6X1T0 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Bacteria RepID=A6X1T0_OCHA4 Length = 313 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 196/338 (57%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+++R+G + T + L F V ++PGDP +++ G++ SP A L +LGLD+ Sbjct: 1 MVSFLIKRMGFALFTLFSVLTLVFVIVRVLPGDPALVILGDQA-SPASIAALHHKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ GV+ G+LG SM + + E + T+EL + ++I +G+P GV Sbjct: 60 PIIVQYGSFMLGVLQGNLGTSMITGRSITAEIMNVLPYTMELTIASLILGVLLGVPAGVW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKR D ++L G S+P F ++L+M+ ++ PV Sbjct: 120 AAVKRNKPADLLLRLVSLLGLSLPAFVAAIILLMIFAIQLRWFPV--------------- 164 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +D + M LP I L I +A I R+TRS+MLEVL +D++RTA Sbjct: 165 ---------ISSGGGDGLLDRLRQMALPTISLALIMMAYITRVTRSAMLEVLNQDFVRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG + V+ HAL N +P+ TV+GL +G L+ ++LTE +FS PGLG+ +++AL + Sbjct: 216 KAKGASHHAVVWRHALGNCTIPITTVVGLYLGILIGNSVLTEIVFSRPGLGKLILNALTQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG +++ M++ VN+L DL YG ++PR+++K Sbjct: 276 RDYTLLQGMIVIYTLMVVAVNMLTDLTYGFLDPRVQYK 313 >UniRef50_B0PEI0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI0_9FIRM Length = 315 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 189/339 (55%), Gaps = 34/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA---GERGISPERHAQLLAELG 57 ML++I+RRL +P GITLL F + PG+P I+ GE + E+ A++ +LG Sbjct: 1 MLRYIVRRLFSAVPVLFGITLLAFLLGILSPGNPAEILLSSGGESAYTAEQLAEVERQLG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+P QQY+ +I GV+ GD G S +++ PV EE RF T++L A++ VGIP Sbjct: 61 LDRPYPQQYVRWIGGVLQGDWGDSFRTKEPVREELFSRFGVTIKLAAGALLLTVMVGIPF 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GVL+A + G + D + ++ S+P FW ++ + + + + P SG+ Sbjct: 121 GVLSAAREGGLMDRLSQWGSILLLSVPSFWAAILSVGIFAEQLHWLPTSGQ--------- 171 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + H++LPAIVL + +R+TRS+++ L YI Sbjct: 172 ----------------------ETWLHLVLPAIVLSFSTVGTTIRLTRSTVIRELSSQYI 209 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 AR KG+++ ++ HAL NA+ PV+T++G +G +L G+++ E++F+ G+G++ +D+ Sbjct: 210 TAARGKGISQRLILGRHALSNAIPPVLTLLGNYLGGILGGSVVVESVFAINGIGKFALDS 269 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + RDYP +QG V++ + ++LL DLL NP+IR Sbjct: 270 IAVRDYPALQGYVMITGFTFVAIHLLTDLLSIWFNPQIR 308 >UniRef50_B1XIM7 Binding-protein-dependent transport systems inner membrane protein n=15 Tax=Cyanobacteria RepID=B1XIM7_SYNP2 Length = 344 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 194/335 (57%), Gaps = 4/335 (1%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +IL RL L + I + F + PGDP + G R A L +LGLD P+W Sbjct: 13 YILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRA-PEATKALLREQLGLDLPLW 71 Query: 64 QQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY+ Y+ ++ DLG S+ SR +PVWE F AT+EL + MI A VG VG+LAA Sbjct: 72 LQYVRYLGSLLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLAA 131 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 ++G+ FD + Y++P+FW GM++ ++ SV P+ R + + L+ Sbjct: 132 SRQGTWFDVGGRLFGIITYALPLFWMGMVVQLIFSVQLGWFPLGTRFP--LDVPPPPTLS 189 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G +D+ + G A+ +++LP LG + + R+ R ++ + L DY+ ARA Sbjct: 190 GLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQSDYVEAARA 249 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G+ +++ HAL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ RD Sbjct: 250 RGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAISLRD 309 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 YP VQG ++ ++++V+L++D++ +++PRIR+ Sbjct: 310 YPTVQGIMVFFGAIVVVVSLVIDIVNALIDPRIRY 344 >UniRef50_Q2FPT2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FPT2_METHJ Length = 328 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 178/340 (52%), Gaps = 20/340 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG---ERGISPERHAQLLAELGL 58 L +I RR+ + +GI++LTF + + P DPV+ G + +S E ++ E GL Sbjct: 6 LGYISRRVLQIPLLLVGISILTFLLMFLSPVDPVVAHFGLPIVQKMSDEDIMKVKDEWGL 65 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 ++P+ +Y +I + GD G S + P+ + + + ATL L A A + I Sbjct: 66 NEPLHVRYFSWISHLFQGDFGRSHIYKRPIIDIIIEKLPATLYLSFVAYGVAIVLAILAA 125 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 ++ + G + D + Y+ P F+ ++LI++ SV P S VS V Sbjct: 126 LIVISREGGLIDRIITNTSFLLYAAPSFFIALILILVFSVWLGWLPSSRMVSISVPP--- 182 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 G D + H+ILPA LG A+ RSS+ E + +DYI Sbjct: 183 --------------GFFAELADRIRHIILPAAALGMSHFALFYGYLRSSLSESIKQDYII 228 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ ++I HA RN++LP VT +GL + L++G+++ ETIF+WPG+GR DA Sbjct: 229 TARAKGIDERTILIRHAFRNSLLPFVTQLGLAIPWLISGSVVIETIFAWPGIGRLTYDAA 288 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + D+ ++ G L + ++I+ NLL D+ Y +++PR+R++ Sbjct: 289 MKSDFMLLIGLTLFTSILVIIGNLLADIAYAIIDPRVRYE 328 >UniRef50_A1T284 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Actinobacteria (class) RepID=A1T284_MYCVP Length = 320 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 111/341 (32%), Positives = 177/341 (51%), Gaps = 27/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP-GDPVMIMAGERGISPERHAQLLAELGLD 59 M +FI RRL ++ I+++ F +++P DP +AG+ P+ A++ A+LGLD Sbjct: 1 MARFIARRLLGMVAVLFAISVIVFLIFNVVPNSDPAARIAGKNA-DPDLIARVNADLGLD 59 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY+ + + G L S S V E+ AT L + A + ++ + G Sbjct: 60 QPLPVQYVTMMKQIFTGQL-TSYASNRNVVEQIWEGLPATFSLCIGAAVIWMSLAVLFGY 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+AV G D L+L G SMP+FW +L+ +S L P V Sbjct: 119 LSAVHAGRFADRALTVLSLVGISMPVFWLAAILLYFLSFKVQLFPTGSYVDLTEDP---- 174 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +D H++LP L + + R+ RS+ML+ + EDY+RT Sbjct: 175 -------------------LDWAYHLVLPWFTLAVLFIGFYSRVLRSNMLDAMNEDYVRT 215 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLL-AGAILTETIFSWPGLGRWLIDAL 298 ARAKGL+ +V I H LRN+M+P+VT+ GL G ++ GAILTET+++ PG+G + +A+ Sbjct: 216 ARAKGLSERQVRIRHVLRNSMIPIVTLFGLDFGMVVGGGAILTETVYNLPGVGLYAGEAI 275 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + D P + + A I+L N +VD+ Y V++PRIR + Sbjct: 276 RSLDLPPLMAVTMFGAFFIVLFNTVVDVAYAVLDPRIRLGE 316 >UniRef50_C7QKP4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKP4_CATAD Length = 315 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 181/337 (53%), Gaps = 25/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++RR I T ++L TF +HM+P M G + +P+ A L +LGLD+ Sbjct: 1 MTTYLIRRFFQSIVTLFIVSLATFGMMHMMPNGVARAMLG-KNYNPQSLAVLNHKLGLDR 59 Query: 61 PMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY H++ + +H DLG S + V + ++ + A++F + +P+GV Sbjct: 60 PLIVQYGHWLDRLALHFDLGYSYQRNQSVNDLLKETLGQSIYIVGLALLFTIVLSVPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A +R S+ D+T + GY++P+F+ G++L L V ++L P++ ++ Sbjct: 120 VQATRRNSVTDYTITTFSFIGYAVPVFFLGVVLRDLFQVQFHLIPIANQID--------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A MILP L +A R RSSML+ L +DY+RT Sbjct: 171 --------------SFHAAFSQPAQMILPVATLVVSGVAGYSRYMRSSMLDELTQDYVRT 216 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKG T+ RV+ H LRNAM+P++T++GL + L+ GA+L E IF+ G+G I+A Sbjct: 217 AIAKGATKRRVLYGHVLRNAMIPMITLVGLSLPALVGGALLVEQIFNIQGIGVLTINAAL 276 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + D+ +V G +L A + ++ +L+ D+ Y ++PR+R Sbjct: 277 QNDFVIVLGTTMLTALVTVIGSLVADISYAALDPRVR 313 >UniRef50_Q21J40 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Bacteria RepID=Q21J40_SACD2 Length = 311 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 171/339 (50%), Gaps = 34/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI+ RL IP + L+TF V M PG P I +R + + L LD Sbjct: 1 MLRFIVFRLLAAIPVLFFVILITFTLVRMAPGGPFDI---DRAVPQQVLDNLNKRYHLDD 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ Q+ Y++ ++ GD G S K V E AT+ELG A++ A +GI G+ Sbjct: 58 PIHVQFGDYVFNLLKGDFGPSFKYPSRTVTELIGIGLPATIELGFYALLVAMVIGILAGI 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LA ++ + D+ + A+ G +P F G +LI+ + + PVSG Sbjct: 118 LAGIRPNTWQDYVPMSFAMIGICLPSFVLGPLLILSFGIGLDWFPVSGWGVSPGDK---- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +LP++ LG A + R+TR ML+V+ +DYIRT Sbjct: 174 --------------------------VLPSLTLGAAYAAYVARLTRGGMLDVMSQDYIRT 207 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R++ HALR A+ PV+ G LL+G+ + ETI+ PGLGR+ + A Sbjct: 208 ARAKGLPEWRIVTKHALRGALNPVIAFAGPAAAGLLSGSFVVETIYQIPGLGRFYLQAAF 267 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ G + ++ +II+ NLL D++ +NP+++H Sbjct: 268 NRDYTMILGTTIFLSVLIIVFNLLADVIQAALNPKLKHG 306 >UniRef50_Q0BY86 Oligopeptide ABC transporter, permease protein n=56 Tax=Bacteria RepID=Q0BY86_HYPNA Length = 323 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 183/338 (54%), Gaps = 28/338 (8%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + LRRL + IPT + I + F + PG P GER + P A + A+ GLDKP Sbjct: 13 WGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFD---GERKLPPATEAAIAAKFGLDKP 69 Query: 62 MWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY +Y+ GV GD G S K+ V + ++ +G M+ A VG +G+ Sbjct: 70 LHEQYFNYVAGVAQGDFGPSYKTLGKSVNDLISDGLPISMTIGALTMLVALTVGTSLGIF 129 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +++ + D+ +G A+ G S+P F G +LI+L+S+ + V G Sbjct: 130 AGLRQNTAADYGVMGFAMFGISVPTFVTGPILILLLSLGAGIFAVGGL------------ 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G N + +M LP + L +A+I R+ R+SM+E + ++IRTA Sbjct: 178 ------------GTWPNIGMSWHNMTLPVLTLALPQIAIISRLMRASMIETMRANHIRTA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ HAL +A+LP+V+ G + ++ G+++ E IF PGLG + +D Sbjct: 226 RAKGLAERDVIVRHALPSALLPLVSYAGPAMAGVMTGSVVIEKIFGLPGLGSYFVDGALN 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V G +++ A +II++NL+ D+LY +++P++++ Sbjct: 286 RDYTLVMGAIIVYAALIIVLNLVADILYAMLDPKVKYD 323 >UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligopeptide transport n=7 Tax=Bacteria RepID=Q2CJ72_9RHOB Length = 320 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 190/339 (56%), Gaps = 25/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELG 57 ML +I RRL +IP I I+ L + + + PGD V M + PER +L LG Sbjct: 1 MLTYIARRLLTLIPMAIAISFLIYLGLDLTPGDAVSHMIPPDVIGTMDPERLDELRESLG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L KP +Y +I GV+ GD G S+ + + + F+ R ATLEL A++ +T +G + Sbjct: 61 LGKPFLVRYWIWITGVLQGDFGYSLAGGVQISKIFLDRLPATLELSCAALVISTILGSIL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G ++A+ RG+ D + + G S+P F++G++ I++ +++ PV GR Sbjct: 121 GTISALTRGTFADQALTVVGMLGVSIPEFFFGLVAILVFALNLGWLPVGGRTLPGY---- 176 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +F D + H+I+PA+VL + A ++R RSSML+ L D+I Sbjct: 177 ------------------DSFWDRLPHLIMPALVLSIMMTAGVMRYARSSMLDALSRDFI 218 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTAR+KG+ RV ++H R A+ PV+ +IG ++ L+ G+++ E +F WPG+G+ + A Sbjct: 219 RTARSKGMPEWRVNLLHGFRVALTPVIVLIGFRLPVLIGGSVIIEQVFQWPGIGKEFLSA 278 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 ++ +DYP+V L ++L +L+VD+L +++PR+R Sbjct: 279 VRSQDYPLVMMVALFSVMAVLLASLIVDILTALIDPRVR 317 >UniRef50_C3WH40 Peptide ABC transporter permease n=6 Tax=Fusobacterium RepID=C3WH40_9FUSO Length = 313 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 99/338 (29%), Positives = 179/338 (52%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI--SPERHAQLLAELGL 58 M+++ ++RL +IP G+T LTF +++ P DP+ + + + E+GL Sbjct: 1 MIRYTIKRLLYLIPILFGVTFLTFLMLYLAPSDPISMKYSSMATVGDSKYIEEKKEEMGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + +QY + V+ GD GIS K +PV +E R TL L +++ + P+G Sbjct: 61 NDSFIKQYTRWSKNVLSGDFGISTKYNVPVKDEIAKRLPKTLALTGTSILITIFLAFPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A + D+ + TG S+P FW G+ML+ + SV + L P+ G Sbjct: 121 IISAKYKNKWIDYIIRFFSFTGISIPSFWLGLMLMYIFSVRFKLLPIVGS---------- 170 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + +ILP++ L +AV +R R+ +LE + +DY+ Sbjct: 171 ---------------------KGIKSLILPSVTLSVWLVAVYIRRIRACILEEINKDYVV 209 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 +KG++ ++++ H L N++L ++T+ G+ +G++L G + ETIF + GLG+ DA+ Sbjct: 210 ALESKGISSSKIMLFHILPNSLLTIITMFGMSIGSILGGTTIIETIFEYRGLGKMAADAI 269 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY ++QG V+ A + +++NLLVD+LY +NP+I+ Sbjct: 270 TNRDYFLMQGYVIWTAIIYVVINLLVDILYKYLNPKIK 307 >UniRef50_D1Y243 Oligopeptide transport system permease protein AppB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y243_9BACT Length = 354 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 181/340 (53%), Gaps = 26/340 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG----ISPERHAQLLAELGLD 59 F +R + + ++ L+F V+ PGDP+ + ++ A+L +GL+ Sbjct: 35 FAAKRFAQMALVWGLVSALSFFIVYFAPGDPLYVYMTPGATGHKMTEAEMARLRESMGLN 94 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +QY ++ + GDLG+S+++R PV + R T L +++ + A+ +P+G+ Sbjct: 95 GSALRQYGAWLKRTLRGDLGLSLQNRQPVLPQIAERLPRTAALMGASLLLSLALAVPLGL 154 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +A ++ DH L+ G S P FW G+MLI+L ++ L P + + V Sbjct: 155 IAGTRKHGKADHVISALSYLGISTPSFWLGIMLIILFAMKLRLLPAARFRTIGVR----- 209 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +F D H LPA VL +AV VR R+ + L E+Y++T Sbjct: 210 -----------------SFGDVARHTALPAAVLSLNNIAVFVRYIRAGTIAQLEEEYVQT 252 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A +KGL+R RV+ H L+N +LPVV ++G + GTL+ G+ + ET+FSWPGLG + A+ Sbjct: 253 ALSKGLSRRRVLYGHVLKNCLLPVVAIVGSRFGTLVTGSFIIETVFSWPGLGMLGMSAIN 312 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYP++ G ++ T+++L N D+LY ++PRIR ++ Sbjct: 313 NRDYPMIMGITMISCTLLLLGNFAADVLYRRLDPRIRLEE 352 >UniRef50_A6NRE3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NRE3_9BACE Length = 330 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 114/342 (33%), Positives = 190/342 (55%), Gaps = 23/342 (6%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS--PERHAQLLAE----L 56 +++L+RL ++ F I++L FA +PGDPV IM G+ + P+ + L + L Sbjct: 5 RYLLKRLVYIVFVFFIISILMFAIYKAMPGDPVEIMLGDSKTTMKPDAYQALYDKTVISL 64 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLDKP+ QY+ ++ ++ G+ G S + + V T+ L V M+ A+ IP Sbjct: 65 GLDKPLPVQYVVWMGNMLTGNFGYSTQYKQAVINIIGAPMANTVLLNVLTMVVVFAIAIP 124 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G++ AV++ IFD + L + GYS+P F ++ I L++V + + P+SG S + Sbjct: 125 LGIVTAVRKNGIFDKSVQVLTIVGYSLPQFIVALLAIFLLAVKFPIFPISGVQSAGLNAT 184 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 F+D HM+LP +V+ + I R R++M++VL DY Sbjct: 185 GLEW-----------------FLDRAWHMVLPVLVMAVSGIGGITRYVRAAMIDVLRMDY 227 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I+TARAKGL V+ +HA RNA++P+VT+ V L G+I+ E++F WPGLG+ LID Sbjct: 228 IKTARAKGLREKVVVYIHAFRNALIPIVTITTWWVIGLFGGSIVIESVFLWPGLGKMLID 287 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L +RD+ VV + + + N+++D+ Y +V+PR+R + Sbjct: 288 GLLQRDFAVVLTMQMFYVVLSLAGNVIMDVAYTIVDPRVRLE 329 >UniRef50_Q11FQ8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FQ8_MESSB Length = 314 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 117/335 (34%), Positives = 195/335 (58%), Gaps = 23/335 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRRL + I T + + L F + ++PGDPVM++ GE +PE A++ LG+D P Sbjct: 1 MNYYLRRLAVAIATVLISSSLVFFAIRILPGDPVMMLLGESAATPEVIARMAERLGMDAP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ ++ D G S+ + +PV E + R +LEL ++ + ++GIP+GV+A Sbjct: 61 LHVQYFRWLTDLLQLDFGTSIGTGLPVANELIKRLPRSLELMAGGILVSLSIGIPLGVVA 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + S + A LAL G S P F G++LI++ S+ L P SG + Sbjct: 121 ARRPDSFIGNAASVLALIGLSAPTFVKGLILIIIFSITLGLLPSSGFTPFTQDPAAN--- 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + ++ILP++ LG V+ R+TR+S+ E LG+DY+RT R Sbjct: 178 --------------------LRNLILPSLTLGLGFAGVVQRITRASLAETLGKDYVRTVR 217 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG++ + HAL NAM+PV+ V+G+++G++L G ++ E +F+WPGL +LI+A R Sbjct: 218 AKGVSENASVYRHALPNAMIPVIAVVGIRIGSMLGGMVVIENLFNWPGLSSYLIEACYAR 277 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP +Q ++++ + LV+L +D+L G++NPR R Sbjct: 278 DYPAIQACLVVIFFVFSLVSLSMDVLMGIINPRRR 312 >UniRef50_Q73QP9 Oligopeptide/dipeptide ABC transporter, permease protein n=1 Tax=Treponema denticola RepID=Q73QP9_TREDE Length = 320 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 181/337 (53%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL+R T I + + F +++ PG+P+ M G+ + E+ L + GL+K Sbjct: 1 MKKYILKRSFSAFITIIVVFTINFIIINIAPGNPIKTMMGKETDNIEQTKALEEKYGLNK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QY Y+ + GDLGIS+ PV + + + T+ L + A + + +G +G++ Sbjct: 61 PLYEQYFRYLKNISTGDLGISIIYNKPVSKMILEKIGPTILLVLTAAVISLLLGTAMGIV 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K G D + G+ ++P FW +MLI+L S P G Sbjct: 121 AARKEGGFIDVSLSGINYVLNALPSFWLALMLIILFSTKLKWLPTFGMTDPRAGYTGIKY 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + D + H+ILP L I L + R+ +SS+L+V ED+I T Sbjct: 181 IK-----------------DVIIHLILPITTLVLIELPLYFRIAKSSVLQVTNEDFIMTL 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ ++ + +NA+LP +TV G+ + L+ G L E +F+WPG GR +++A+ + Sbjct: 224 RAAGMNEKKIFRKYIFKNAILPTITVFGISLAYLITGVALIEIVFAWPGTGRLVLNAINQ 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+ G L+++ I ++ ++VD++Y +V+PRIR+ Sbjct: 284 RDYPVLMGIYLIMSIAIAVMMMVVDIVYAIVDPRIRY 320 >UniRef50_D1A5X3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5X3_THECD Length = 307 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 123/340 (36%), Positives = 182/340 (53%), Gaps = 37/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLT----FAFVHMIPGDPVMIMAGERGISPERHAQLLAEL 56 M LRR L + + T + FA + GDP + + G PE+ L EL Sbjct: 1 MRTLHLRRTALRLLVLLASTFIALTTAFALGRLS-GDPTVNILGPTA-PPEQREALRHEL 58 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLD+P QYL Y V GD G S++ + R TL+L M A +G+P Sbjct: 59 GLDRPPLTQYLDYFRSVFTGDFGDSLQFYQSNTTLILERLPYTLQLVAAGMTIAVLIGVP 118 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +GVLAA + G+ +D A LAL G S+P+FW GMML+ L +V P + Sbjct: 119 LGVLAATREGTWWDRAASTLALLGQSVPVFWLGMMLVALFAVKLGWLPAGQSGTP----- 173 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 H+ILPA+ + P+A I R+TR+SM E L E + Sbjct: 174 --------------------------RHLILPAVTMSLYPMAHIARLTRASMSEALAEPF 207 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I +ARA+GL+ V+ HA +NA++PV+T++ LQ G L++GA+ E ++SWPGLG+ + Sbjct: 208 IDSARARGLSTAGVVWRHAFKNALMPVLTIVILQTGILMSGAVAIEYVYSWPGLGQLALQ 267 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 A+Q RDYP+VQ V+ A +++NLLVD+++ +V+PR+R Sbjct: 268 AVQFRDYPLVQAIVVFGALTFVVLNLLVDVIHSIVDPRVR 307 >UniRef50_Q46AX7 ABC transporter, permease protein n=3 Tax=Methanosarcina RepID=Q46AX7_METBF Length = 313 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 202/341 (59%), Gaps = 34/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELG 57 M ++I +RL +V G+TL++F +++ PGDP ++A ER + + + G Sbjct: 1 MWKYITKRLAMVSVVIAGVTLVSFFAMYLAPGDPAELIALERYGQDLDASQIESVREAEG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD P++ QY ++ ++H DLG S+ + V EE + + AT+EL V ++ + + +P+ Sbjct: 61 LDAPVYFQYFIWLDHLLHLDLGRSIITSDDVLEEILLKLPATIELTVAGLLISLLIALPI 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G+L+A+++ ++ ++ +L G S+P FW G++LI L S+ ++ P G S Sbjct: 121 GILSALQKNTLLNNCCAFFSLIGISIPNFWLGILLIWLFSLTLHIFPSYGYGS------- 173 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 ++ + LPA+ LG ++ R+TR+S++EV+ ++YI Sbjct: 174 ------------------------LSQLALPALTLGISMSSITARLTRASLMEVMEKEYI 209 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 ARA+G V++ HAL+NA+LPVVT G+Q+G LL GA++ ETIFSWPG+G+ L+D+ Sbjct: 210 LAARARGFDEYTVVLRHALKNALLPVVTFAGMQLGYLLGGAVIVETIFSWPGIGKLLVDS 269 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + RD+ +VQG VL +A + L +L VD+LY V++PRIR+ Sbjct: 270 IFARDFSMVQGCVLFIAVLFSLSSLAVDILYAVLDPRIRYD 310 >UniRef50_C4ZGE2 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGE2_EUBR3 Length = 347 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 180/338 (53%), Gaps = 35/338 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++R+ L I T I+L+TF ++ IPG P E+ SP +L A GLD+ Sbjct: 45 MGKYIVKRVILAIFTIFIISLITFFAMNAIPGGPFN---SEKAKSPAVMKELEARYGLDQ 101 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY +Y+ GV+HGD G+S+K+ P+ + F + +LG+ A + A G+ +G + Sbjct: 102 PLIVQYKNYMAGVLHGDFGVSLKTDRPISDIIGESFPISAKLGLLAALTAIVFGVVLGSI 161 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ R D V SMP F +L+ + + S+M+ L + Sbjct: 162 AALMRNRWPDRVIVFFVTLITSMPSFVIATLLLYFFCIKLGVVQAFSSGSNMILLPVLSL 221 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 P+A I R+T++SML+ LG+DYIRTA Sbjct: 222 SL--------------------------------SPMAYITRLTKTSMLDALGQDYIRTA 249 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG+ + ++I VHALRNA++PV+T +G +G +L G+++ E+IF+ GLG + + Sbjct: 250 KAKGVHQYKIIFVHALRNALIPVITYVGPMIGGILTGSMVIESIFNIGGLGSKFVSCITN 309 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ L +A +++ NL+ D++Y V++PRI+ Sbjct: 310 RDYTMIMATTLFLAVIMVGANLITDIVYKVIDPRIKLD 347 >UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter n=3 Tax=Bacillaceae RepID=B1HVT9_LYSSC Length = 313 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 185/318 (58%), Gaps = 24/318 (7%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDL 78 ++++TF ++PGDPV M G P + L +ELGLD+P+++QY+ ++ G++ G L Sbjct: 18 VSIITFGVFQILPGDPVRTMLGTEA-DPTQIENLRSELGLDRPLYEQYVDWMKGLLTGQL 76 Query: 79 GISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLAL 138 G S++ +PV + R T+ L ++ + +P+G+ AA ++ I D + + Sbjct: 77 GDSIRFSMPVKDLLFDRLPVTMSLAGITLLIVLVISLPLGMFAARRQNKISDVSLSTVTQ 136 Query: 139 TGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNF 198 G ++P FW GMMLI+ V + ++ +SG + + Sbjct: 137 IGMAVPSFWLGMMLILYVGLQFSFFKISGYIP-----------------------WTQSV 173 Query: 199 IDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRN 258 A++ ++LPA+ + +AV R R+++LE + DY+RT R+KG++ V+ H L+N Sbjct: 174 AGALSTLLLPALTIAIPQIAVNFRYVRTAILEQVQLDYVRTIRSKGMSEQNVMYKHVLKN 233 Query: 259 AMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMII 318 +M+P++TV GL + ++AG I+ E +FS PG+G+ LI A+ RD+P+VQG V+ + ++ Sbjct: 234 SMIPILTVFGLIMAEVVAGTIIVEQVFSLPGIGQLLITAISNRDFPLVQGIVMYITVAVV 293 Query: 319 LVNLLVDLLYGVVNPRIR 336 ++N +VD+LY V++PRIR Sbjct: 294 MINFIVDILYSVLDPRIR 311 >UniRef50_A6M358 Binding-protein-dependent transport systems inner membrane component n=6 Tax=Clostridium RepID=A6M358_CLOB8 Length = 308 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 108/339 (31%), Positives = 183/339 (53%), Gaps = 36/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I +R + + T I + F + ++PG P ++P+ A + A+ G+DK Sbjct: 1 MLKYIGKRFLISLVTIWAIITIVFFLMRLMPGGPFD----GEKLTPQIKANMEAKYGMDK 56 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QY Y+ ++ GD G SM V + F A+ ++G A+ A GI +GV Sbjct: 57 PVLEQYGMYMKNLVQGDFGESMTFKGRGVTDTIAKSFPASAKIGGVAVGMAVITGIILGV 116 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+K G D V ++ ++P F G +LI +++V L P +G Sbjct: 117 LAALKNGKWPDKLIVFISTLCITIPSFVIGAVLIYVLAVQLGLLPATG------------ 164 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +GE N+ ++P + L PL+ I R+TRS +++VL DYIRT Sbjct: 165 ------------FGEWENY-------VMPCMALAAAPLSFITRLTRSKLIDVLKADYIRT 205 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKGL++ +I HALRN+++P+VT IG + ++L G+ +TE IF+ PGLG + ++ Sbjct: 206 AKAKGLSKTTIIFKHALRNSLIPIVTYIGPLIASILTGSFVTEKIFAIPGLGNEFVQSVT 265 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ G + TM++ VD++Y +++PRI+ + Sbjct: 266 NRDYSMLLGVTIFYGTMLVFFAFFVDVIYVLIDPRIKLQ 304 >UniRef50_A8HT90 Peptide ABC transporter permease protein n=32 Tax=Proteobacteria RepID=A8HT90_AZOC5 Length = 314 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 121/336 (36%), Positives = 190/336 (56%), Gaps = 33/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL + + ++++ FA +H+ GD +AG SP + A++ A+ GLD+ Sbjct: 10 MLAFTLRRLVVALSVAFTVSVVAFALLHLS-GDLATTIAGPEA-SPAQVAEVRAQYGLDR 67 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++W +H D G S R V R TLELG ++ + + +P+GVL Sbjct: 68 PLTAQYLDWLWSALHLDFGQSFYFRSSVVSLIAERMPVTLELGAISLFISLVIAVPLGVL 127 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV RG+I D A+ + G ++P F G+ LI++ +V+ PVSG S Sbjct: 128 AAVFRGTIIDRLALTFCVLGQAIPTFCLGLGLIIIFAVNLRWLPVSGNAS---------- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +LP+I LG + ++R++R+ MLEVL DYIRTA Sbjct: 178 ---------------------WQNFVLPSIALGWYAVPAVMRLSRNGMLEVLSADYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ +V++ HALRNA++PVV + +Q G +L G+I+ E +FS G+G +A+ R Sbjct: 217 RAKGLSPAKVVLKHALRNAIIPVVALAAVQFGFMLGGSIVVEAVFSMHGIGHLAWEAIAR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+PVVQ VL++A + I + L D++ +++PR+R Sbjct: 277 NDFPVVQAVVLILAAIYITLTFLADVVNALLDPRMR 312 >UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligopeptide) n=15 Tax=Alphaproteobacteria RepID=B9JSV0_AGRVS Length = 336 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 124/357 (34%), Positives = 192/357 (53%), Gaps = 40/357 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + +RRL IPT + I+ + FA + M P +P+ + I PE Q+ A LGLD+ Sbjct: 1 MFTYTIRRLLFAIPTLLIISFIIFALLAMAPNNPLGDL--PLTIPPEVREQMRAALGLDQ 58 Query: 61 PMWQQYLHYIWGVM-----------HG-------DLGI-SMKSRIPVWEEFVPRFQATLE 101 PM ++ ++ G L + S +R PV + V R TL Sbjct: 59 PMIVRFFLWLKQFFINEPLNIFEQITGLTVGSGQRLRVLSWTTRSPVVDLIVQRMPQTLW 118 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 + + +F + IP+GV++A K+ SIFD +++ GYS+P F+ G++LI++ S + Sbjct: 119 VVGLSYVFGVLLAIPLGVISAYKQYSIFDQIGTFVSMVGYSVPTFFTGVLLIVIFSSTLH 178 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 P + + +F+ V M+LP +VL + I Sbjct: 179 WFPS-------------------VYDTNLQVVDWTSFVAQVKQMVLPVMVLTLYNTSQIS 219 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ +GAI+T Sbjct: 220 RFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIFSGAIIT 279 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 E IF GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 EQIFRVNGLGQLLITAIQSGDLPLVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 336 >UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B9JKG6_AGRRK Length = 336 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 125/357 (35%), Positives = 192/357 (53%), Gaps = 40/357 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F LRRL +PT + I+ + FA + + P +P + I PE Q+ A LGLD+ Sbjct: 1 MFNFTLRRLFFAVPTLLVISFVIFALLDLAPNNPTGDL--PLTIPPEVREQIRAALGLDQ 58 Query: 61 PMWQQYLHYIWGVM-----------HG-DLG-------ISMKSRIPVWEEFVPRFQATLE 101 P +YL ++ G G +S +R PV + V R TL Sbjct: 59 PFLIRYLRWLHQFFINEPLNILEQITGWQFGDGHRLRVLSWATRSPVVDLVVQRMPQTLW 118 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 + + +F + IP+GVL+A K+ SIFD +++ GYS+P F+ G++LI++ S + + Sbjct: 119 VVGLSYLFGVLLAIPIGVLSAYKQYSIFDQIGTFISMVGYSVPTFFTGVLLIVVFSSYLH 178 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 P + + +F+ V M LP +VL ++ I Sbjct: 179 WFPS-------------------VYDTNLRVTDWSSFVAQVKQMFLPVMVLTLYNVSHIS 219 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ +GAI+T Sbjct: 220 RFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIFSGAIIT 279 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 E +F GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 EQVFRVNGLGQLLIVAVQGGDIPMVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 336 >UniRef50_C7Q7C7 Binding-protein-dependent transport systems inner membrane component n=15 Tax=Actinomycetales RepID=C7Q7C7_CATAD Length = 336 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 116/357 (32%), Positives = 183/357 (51%), Gaps = 44/357 (12%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP---GDPVMIMAGE---RGISPERHAQLLA 54 M+ +I+RRL + I+L+TF ++ P G +A + + +P+ A ++ Sbjct: 1 MISYIIRRLFSAVILLFVISLITFFIFYVFPRLGGQTTESLAEQFVGKTQNPQAIAAVIH 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHG---D------------LGISMKSRIPVWEEFVPRFQAT 99 G D+ +W QY +I G+ G D LG S K+ V + T Sbjct: 61 RFGFDQSVWVQYGRFIKGIFVGYDYDTGTRMSHCPAPCLGYSFKTNNLVTDSIGQWLPVT 120 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH 159 + L V A + G+ VGV +A+K+GS+ D + AL G S+P+++ G +L ++ V+ Sbjct: 121 ISLAVGASVLWLVFGVAVGVASALKKGSVVDRAGMITALVGVSLPVYFVGPLLSLVFVVN 180 Query: 160 WNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAV 219 W++ P G V H++LP I + A+ Sbjct: 181 WHILPDPGYVHITQDP-----------------------WGWFTHLLLPWIAVAFGLAAL 217 Query: 220 IVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAI 279 R+TR ML+ + ED+IRTARAKGL VI HALR A+ P+VT+ G+ +G L G + Sbjct: 218 YARLTRVGMLDTMNEDFIRTARAKGLPERTVIFKHALRAALTPIVTIFGMDLGFALGGVV 277 Query: 280 LTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 L E +F+ PG+GR +DA+ + D PV+ G ++ + I+L NL+VDLLYGVV+PR+R Sbjct: 278 LAEQVFNLPGIGREAVDAVGQSDLPVIMGVTIVASAFIVLANLVVDLLYGVVDPRVR 334 >UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG2_EUBSP Length = 330 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 107/333 (32%), Positives = 185/333 (55%), Gaps = 24/333 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 + +R+ G + T + +++LTF ++PGDPV I+ G P + A L ELGLDKP+ Sbjct: 19 YAVRKAGTFVITLVLVSILTFGVFQILPGDPVDIILGVEA-DPMQAAALTKELGLDKPIM 77 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 ++Y +++G + GDLG S++ ++PV + T L V +++ + +P V A Sbjct: 78 ERYFDWVFGAVRGDLGNSIRYQVPVGDLLKSSLPVTASLAVLSILLTILISVPAAVFLAK 137 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + G ++P FW G++LIML +V +++ P Sbjct: 138 NHRKNSAMVLSSVTQFGIAVPSFWIGILLIMLFAVQFHILPSGDYTPFS----------- 186 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 N I+ + +ILPA + A I+R ++++L+ +G DY+RTAR+K Sbjct: 187 ------------ENPIEWLKSLILPACSIAVGTTATIIRYLKNTILDQMGFDYVRTARSK 234 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G+T+ +V+ H L+NA+LP +T++G+ + +L G+++ E +F+ PG+G L + RD+ Sbjct: 235 GMTQKQVLFKHVLKNALLPAITILGMMIVDVLGGSVIVENVFNLPGIGHLLTSGVGNRDF 294 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 P+VQG V +A ++++NLLVD LY VV+PRIR Sbjct: 295 PLVQGLVFYLAITVLVINLLVDFLYTVVDPRIR 327 >UniRef50_C2KYW2 Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein n=9 Tax=Firmicutes RepID=C2KYW2_9FIRM Length = 320 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 175/335 (52%), Gaps = 22/335 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I RR+ IP + ITLL+F ++++P D V + ++ + + E GL+ Sbjct: 1 MAFYIGRRILQSIPLLLLITLLSFGLMNLVPYDAVDSI-SNSKMTEAQREEKREEYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 PM QY ++ ++ G+ G S+ S + ++ R T+ L + + + A + + VG+ Sbjct: 60 PMPVQYFRWLKNILRGEFGNSLLSHTRIKDDLRIRIPNTILLVLPSYLTAYFLAMAVGLY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++G D + G ++P FW ++LI HW L P+ G + Sbjct: 120 SASQKGKWQDKLLDSFSTIGLAVPSFWIALVLIYFFGYHWKLFPLLGMHTI--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G++ + D + H+ LP VL ++R RSS L L +DY+ Sbjct: 171 ------------GKERDIPDFLHHLFLPYCVLVLAFFPDLMRYVRSSALSELRQDYVLVQ 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G ++ ++ H RN LP+++ +G+ + L+ GA++TE++FSWPG+G + + A+ Sbjct: 219 RAFGASKREILFHHVARNVCLPMISKLGMSLPLLVTGAVITESVFSWPGIGLYFVKAVDA 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DYP+V +LL T++IL NLL D+LY +++PRI Sbjct: 279 LDYPIVMAILLLSGTLVILGNLLSDILYCLIDPRI 313 >UniRef50_A0QRE3 Dipeptide transport system permease protein DppB n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRE3_MYCS2 Length = 319 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 200/338 (59%), Gaps = 22/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I RL + G++L+ F + ++PGDP + + G G + E A L ELGLD+ Sbjct: 1 MTATIRNRLLSTLLVLFGVSLIVFLLLQLVPGDPAVTILG-SGATAEAVAALRTELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + Q+ Y+ G++ GDLG S+ PV + +PRF T+ L V A+I V +P+GV+ Sbjct: 60 ALPIQFFDYLGGLVRGDLGRSLTVNAPVADIMLPRFANTIILTVAALILCIVVAVPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ SIFD ++ ++L G S+P++W+G++LI +V P SG + Sbjct: 120 AAHKQYSIFDRVSMMVSLAGASVPVYWFGLLLIGAFAVTLGWLPTSGMYNPRF------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G F D +AH++LPAI +PLAVI RMTRS M+++L +DYIRT Sbjct: 173 --------------PGGFTDLLAHLVLPAIAAALVPLAVIARMTRSVMIDILQQDYIRTL 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL+ V+ HALRNA+ P+V +IGLQVG LL G + E +F WPGLG+ L ++ + Sbjct: 219 RASGLSTNSVLWRHALRNALPPIVNIIGLQVGYLLGGVVFVEVVFGWPGLGQQLYTSITQ 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQ GVL +A +++NLL D G+++PR R K Sbjct: 279 RDIPVVQAGVLFIALAFVIINLLADGAVGLLDPRTRRK 316 >UniRef50_Q98AA8 ABC transporter, permease n=1 Tax=Mesorhizobium loti RepID=Q98AA8_RHILO Length = 329 Score = 329 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 21/338 (6%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE--RGISPERHAQLLAELGLDK 60 + I R + I T + + +L F +IPGDP ++ G ++ E+ GLD+ Sbjct: 8 RHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDR 67 Query: 61 PM-WQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P+ Q + Y+ + GDLG S K R V + + AT+ L A + A +G+ +G Sbjct: 68 PLFPDQLVDYLSATVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLG 127 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + A +RG D+ A G +L YS P FW M+L+++ S P G S + Sbjct: 128 IYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMILVVIFSTSLGWLPGYGAYSPGGTISFV 187 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + +D + H+ LP + + V + R++M +V+ EDY+ Sbjct: 188 -----------------DSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMV 230 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGLT ++++ HA RNAMLPVVT+I L +G ++AGAI E +F+WPG+G ++AL Sbjct: 231 TARAKGLTNGQMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEAL 290 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++QG LL+ I++ NL+ DL YG+++PR+R Sbjct: 291 NARDYPILQGIFLLLGASIVVANLVADLAYGLLDPRVR 328 >UniRef50_UPI0001C31B38 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31B38 Length = 322 Score = 329 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 24/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP-GDPVMIMAGERGISPERHAQLLAELGLD 59 M+++++RR + + ++LLTF +++P GDP ++ AG R SPE AQ+ +LGLD Sbjct: 1 MIRYVVRRALWSLVLLLFVSLLTFVLFYVLPSGDPALLRAG-RNASPEALAQIRRQLGLD 59 Query: 60 KPMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QY ++ + +H DLG S + PV R AT+ L + A++ A+ IP+G Sbjct: 60 EPLPVQYWTFLKALVLHFDLGYSWYNDAPVKSLIADRLPATISLTLGAVVLWLAIAIPIG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPV-SGRVSDMVFLDD 177 +++A+ R + D +G AL S P++W G++ + L + P+ G S + DD Sbjct: 120 IVSALHRRTWADRLFMGGALIAVSAPVYWVGLVALYLFADDIGQFPLLPGANSYVALTDD 179 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 G ++LP +VL AV RM R S++E + D++ Sbjct: 180 PGAWFGA--------------------LLLPWLVLAGAFAAVYARMLRGSLIETMSLDFV 219 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTARAKG++ RV++ H +R A+ PVVT++G+ +G LL GAIL ET+F+ PG+GR DA Sbjct: 220 RTARAKGISERRVVLRHGVRVAITPVVTLLGVDIGVLLGGAILVETVFNIPGIGRLGFDA 279 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + D+PV+QG VLL A +++ NL+VDL+Y +++PR+R+ Sbjct: 280 IDHADFPVIQGTVLLAALCVVVANLVVDLVYALLDPRVRYD 320 >UniRef50_UPI0001C313C7 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313C7 Length = 316 Score = 329 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 120/339 (35%), Positives = 190/339 (56%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 M +++ R+ + T +G++++ F V ++PGD + +G+ S E L LGL Sbjct: 1 MARYLASRVAQLGLTLLGVSVVIFLLVRLLPGDVLDASSGDTVAGSSEGRDALREALGLA 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY +I G++ GDLG+S++S P+ TLE+ + + A VGIP+GV Sbjct: 61 DPLPVQYFDWIKGLVTGDLGVSLRSGEPLANLLSTALPMTLEIVLLGVAIALLVGIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+AV+ G D+ + + G S+P FW +++++ S + P S +S Sbjct: 121 LSAVRSGRAIDYVGRAIGMIGVSLPSFWLATLMLLVTSSAFGWVPSSTYISP-------- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + + +A +ILPA+ + LA+++RM R++MLEVLGEDY+RT Sbjct: 173 ---------------FEDPLGNLAALILPALCISVYMLALVMRMVRATMLEVLGEDYVRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG V++ HALRNA+LPV+TV +VG LLA L E +F PGLG L+ + Sbjct: 218 ARAKGAAPRTVVVRHALRNALLPVITVSAFEVGVLLASTALIEVVFGLPGLGNLLVQGIF 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY V+Q LL+A +L+NL+ D+LY +V+PR+ + Sbjct: 278 NRDYAVIQTVTLLLAATFVLMNLIADVLYALVDPRVELR 316 >UniRef50_C9KNL5 Oligopeptide ABC transporter, permease protein AppB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNL5_9FIRM Length = 314 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 181/341 (53%), Gaps = 32/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--GISPERHAQLLAELGL 58 M ++I++RL +IP GIT LTF+ + D V + + IS + Q AELGL Sbjct: 1 MHRYIIQRLLQLIPILFGITFLTFSLMQFTQDDAVDHLYEQSGAAISEKVKEQKRAELGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P QY H++ G GD+G S S V+E F + T+EL + ++ + IP G Sbjct: 61 DQPFLVQYGHWLKGAATGDMGRSYISGKRVFENFSEKLPMTVELMLVSIAMTLLISIPFG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +L+A ++ ++ D L G S+P F+ ++LI +++ NL P+ G Sbjct: 121 ILSAARQNTMLDLCVRFLTFIGNSLPNFFVALLLIYFLALKLNLFPIMGS---------- 170 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + A + LPA+ L A R R+++LE LG+ Y+ Sbjct: 171 --------------------KENAASVFLPALTLAISMSAKYTRQIRAAVLEELGKPYVA 210 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR++G++ ++ LR++ + ++T++ L +G+LL G + ETIF W G+G+ +DA+ Sbjct: 211 GARSRGISEWTILTHSVLRSSFITIITLLALSIGSLLGGTAIVETIFMWDGVGKLAVDAI 270 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYP++Q V+ ++ + + VNL DLLY ++PR+R+++ Sbjct: 271 LSRDYPLIQAYVVWMSVIYVGVNLAADLLYHALDPRVRYEE 311 >UniRef50_B9KBE7 Oligopeptide ABC transporter, permease protein n=13 Tax=Bacteria RepID=B9KBE7_THENN Length = 348 Score = 329 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 7/326 (2%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGI----SPERHAQLLAELGLDKPMWQQYLHYIWGV 73 G+T + F+ + + D ++ + +PE+ L + GL+ +Y ++ Sbjct: 21 GVTFIVFSMIQSLGPDKLLAAYVNPNMLDKLTPEQMDALKEKYGLNDFFVIRYGKWLLNT 80 Query: 74 MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTA 133 + GDLG S+ + PV + + R T+EL + A+ VGI +GV AAV RG DH Sbjct: 81 LKGDLGWSLVGKEPVKDALLKRLPYTIELALYAIFPVIFVGIWLGVKAAVHRGKFLDHFI 140 Query: 134 VGLALTGYSMPIFWWGMMLIMLVSVHWNLTP---VSGRVSDMVFLDDSNPLTGFMLIDTA 190 A+ G+S P F +G++++M+ N P +S +++ + T + +D Sbjct: 141 RIFAVVGWSFPDFVFGLLVLMIFYSILNWLPPGNLSLWAEEVIRSPEFRRYTKLITVDAL 200 Query: 191 IWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRV 250 + G F D + H+I P I L + A ++R+TRSSMLEVL ++Y+RTARAKGL V Sbjct: 201 LNGRLDVFWDGLKHLIGPIITLSWLWWAYLLRITRSSMLEVLNKEYVRTARAKGLPEDVV 260 Query: 251 IIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGV 310 I HA RNA++PV TV G V L +G ++ ET+F+ G+G + A + DY V Sbjct: 261 INKHAKRNALIPVTTVAGGMVIGLFSGTVIVETVFNRTGVGSFTAQAALQLDYASVMASA 320 Query: 311 LLVATMIILVNLLVDLLYGVVNPRIR 336 L +T++++ NL++D+LY +++PRIR Sbjct: 321 LFFSTILVVGNLIIDILYALIDPRIR 346 >UniRef50_D1CFB1 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFB1_THET1 Length = 311 Score = 329 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 125/337 (37%), Positives = 185/337 (54%), Gaps = 29/337 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FI RRL + +T +TF H+ PGDP++I+ G P +A+L E GLDK Sbjct: 1 MGSFIARRLLSALFVLFSLTFITFMVGHLAPGDPILILMGPHQ-DPTTYARLRHEYGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+W QYL YIWG++HGDLG+S + VW+ + +G ++ +GIP+GV Sbjct: 60 PLWAQYLSYIWGLLHGDLGLSYRYEGRSVWDLIKSGVPVSFRVGGLGLVLGLMIGIPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K S+ D + V L L Y++P F + + Sbjct: 120 IAAIKHNSVVDRSIVFLTLAFYAVPSFVL--------------------IPIAWEIIRFM 159 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G + A WG H +LP ++L + I R+TR+SMLEVL +DY+RT Sbjct: 160 NSAGLPTLPVAGWGTW-------QHYVLPVVILAAANIGYITRLTRNSMLEVLTQDYVRT 212 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR+KGL R VI HA RNAMLP+VTVIG V L+ GA + E + + PG+ + ++Q Sbjct: 213 ARSKGLPRRLVIWRHAFRNAMLPLVTVIGPSVAFLITGAFVVENLLNVPGIAFLTVQSIQ 272 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +RDY V+QG +L+ ++++NLL D+ Y +++PRIR Sbjct: 273 QRDYAVIQGTTILLGVAVVIMNLLTDMAYMILDPRIR 309 >UniRef50_A9EXW6 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bacteria RepID=A9EXW6_9RHOB Length = 313 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 108/335 (32%), Positives = 190/335 (56%), Gaps = 27/335 (8%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +Q+IL+RL L+ TF + ++ F V ++PGDP + +AG+R S A + LGL++P Sbjct: 4 IQYILKRLALMAVTFFLVMIIIFLLVRLLPGDPAIAIAGDRA-SDADLAAIRERLGLNQP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ + GDLG S+ R PV + R TL L A++ + + P+ +A Sbjct: 63 LVIQFWQFLSNTVQGDLGRSILMRAPVMDVIANRLPTTLFLTTYAVVLSVLIAGPLAFVA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ RG D + G SMP+F+ G++L+ ++ PV G Sbjct: 123 ALNRGRWPDAVIRTVFQVGLSMPVFYIGLILLTFLAAQLRWFPVGGY------------- 169 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +F++ + H+ LP++ + A+I+R RS+++EV+ +Y+ AR Sbjct: 170 -------------GDSFVERLYHLFLPSVAVALYTSAIIMRNLRSAIVEVVDAEYVEFAR 216 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +++ H LRNA++ VT++GL +G L++G ++TET+F+ PG+GR +++A+ R Sbjct: 217 AKGLSAWQILGRHVLRNALISTVTLLGLSIGNLMSGTLVTETVFAVPGVGRLMLEAIFAR 276 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP++QG L A ++ +V LL DL+ ++PR+R Sbjct: 277 DYPLIQGLTLTFAVLVSIVFLLTDLIQSALDPRMR 311 >UniRef50_B9JNQ5 Dipeptide ABC transporter n=8 Tax=Rhizobiales RepID=B9JNQ5_AGRRK Length = 365 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 138/336 (41%), Positives = 207/336 (61%), Gaps = 6/336 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFA----FVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 +LRRL + + L ++P DPV+ + G +S + ++ ELGL + Sbjct: 32 LLRRLAGRVVAIVTTLLGLLFLTFSMGRLLPADPVLAITGSE-VSKAVYDRVYNELGLGQ 90 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W Q+L Y+ + GDLG S + P+ + + F AT+EL + AMI VG+P+G+ Sbjct: 91 PIWMQFLTYVGKIATGDLGTSATTGQPILTDLLSIFPATIELAIIAMIIGIVVGVPLGIT 150 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RG+I DH A +AL G+S+PIFW G+M + + L SGRV D+++ P Sbjct: 151 AAVRRGTILDHIARIVALAGHSIPIFWMGLMALFVFYAKLQLVGASGRV-DVLYEGLVTP 209 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF+LID+A+ G+ F A+ H+ILP +LG +A I RM+RS MLE LG++YI TA Sbjct: 210 VTGFLLIDSAMEGQWDVFQSALNHIILPGAILGYYSVAYICRMSRSFMLEQLGQEYIVTA 269 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL R +V+ HA RN + ++T++ L G LL GA+L ET+F WPGLG++L LQ Sbjct: 270 RAKGLGRRKVVWRHAFRNIRVQLLTIMALTFGGLLEGAVLIETVFGWPGLGQYLTRGLQM 329 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D VV G VL + + + +N++ D+LY +++PR R Sbjct: 330 NDMNVVMGAVLTIGAVFLTINIISDVLYRILDPRTR 365 >UniRef50_D0GM08 Oligopeptide ABC transporter, permease protein AppB n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GM08_9FUSO Length = 320 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 186/338 (55%), Gaps = 18/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++++RL + G+++ F ++ PG+P + M G+ PE + L ELG Sbjct: 1 MLKYLIKRLIISFFVLFGVSISIFYLINKQPGNPYLHMI-NPGVPPEIVKKKLIELGYYD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + +Y+ ++ V+ DLG S+K V + R T L ++ ++ GI +GV+ Sbjct: 60 PFFIKYVKWLQRVIFLDLGYSIKYSEKVTKVIASRLGNTFILMGTSLFLSSISGIFLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+K+ ++ D L+ G S+P F+ ++LI + S L P SG + + Sbjct: 120 SAIKKNTVIDEIITVLSFAGLSIPTFFVSLLLIKVFSYDLRLFPASGMYDSINGSEGIT- 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F + HMILP VL + + +R TRS+++E + ++Y+ TA Sbjct: 179 ----------------VFYNLFRHMILPTTVLAIMQSVIFIRYTRSAVIEQMSKEYMMTA 222 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGLT R + HAL+NA+LP++TV LQ+ T+ +GA++TET+F WPG+GR +A+ Sbjct: 223 MAKGLTFKRAVFGHALKNALLPIITVFFLQLPTIFSGALITETVFVWPGIGRLGYEAISN 282 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G + + A +IIL NL D+ Y ++ RI+ + Sbjct: 283 RDYPLIMGILTVTAIIIILSNLFADIFYMKIDKRIKLQ 320 >UniRef50_Q47XM7 Peptide ABC transporter, permease protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XM7_COLP3 Length = 342 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 131/333 (39%), Positives = 210/333 (63%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL L I T + +TLL+F+ + PGD V+ +G+ S A L +DK Sbjct: 1 MLTFTLRRLSLFIFTMLVLTLLSFSLSFLFPGDTVINHSGQINASATELAHLNQVYQMDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 ++ QY Y+ +++GD G SM S+ P+ E + AT+EL + A++ A VGIP+G + Sbjct: 61 SIFNQYGAYLTHILNGDFGQSMASQSPISNEIIKLLPATIELSLVALLIAMLVGIPLGFI 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K D+ + LA+ GYS+P+FW G++ I++ S+ P +G++S + ++ Sbjct: 121 AAIKHNKTSDNVILSLAMLGYSIPVFWLGLLAILVFSIGLGWLPSAGQISLLFEIEFVTG 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + F ++ + + F DA AHMILPA V+ P + +R++R+SM+EVL YIR A Sbjct: 181 IQFFDILLSDSPYKWQAFRDASAHMILPACVIALAPATIFIRLSRASMIEVLAASYIRAA 240 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ ++I HA+RNA++ ++ +GLQ L+ A++TE IFSWPG+GRWLID++ + Sbjct: 241 RAKGLSFQQIIFRHAIRNALIQIIRHVGLQFANLVTIAMVTEVIFSWPGIGRWLIDSIYQ 300 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNP 333 RDY +Q G+L+++ I +V++L D +Y +NP Sbjct: 301 RDYTAIQSGLLVLSCFIFIVHILTDFIYAALNP 333 >UniRef50_C7G7D5 Oligopeptide ABC transporter, permease protein AppB n=2 Tax=Firmicutes RepID=C7G7D5_9FIRM Length = 328 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 23/345 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE--RGISPE----RHAQLLA 54 ML+++ +R+ +I F ++++ F + +PGD + +S E R+ + Sbjct: 1 MLKYVGKRILYMIGVFFVVSIILFVLFNNVPGDRALNQVQNLRGKVSDETFQLRYQEARE 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 +LGLD P+ +Y+ ++ ++ GDLG S + V + T+++ + + I A A+ Sbjct: 61 KLGLDDPIPVRYVKWMGNLLKGDLGYSSFYKKDVKDCLSTPLLNTIQINIVSTILALAIT 120 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 IP+G+ AV++ S FD+T L + GYSMP + ++ I + +V P+SG + Sbjct: 121 IPLGIHCAVRKFSKFDNTVQVLTIVGYSMPQYIVALVFIFVFAVKLGWFPISGMNTPNFQ 180 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 +D + ++ LP IV+ L + R R++M++ L Sbjct: 181 GTGV-----------------AFVLDRLHYLALPVIVMTVAALGSMTRYVRAAMIDALRM 223 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYIRTARAKGL VI HA RNA+LPV+T+I ++ G+I+ E IF G+G+ Sbjct: 224 DYIRTARAKGLKEKVVIYSHAWRNALLPVITLIISWFMSIFMGSIVIEQIFQLNGIGKMY 283 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 L +DY + +L + +L NL+ DL YG+V+PR+R K Sbjct: 284 YVGLMNQDYDMALAVNMLYCIITLLSNLITDLSYGLVDPRVRIDK 328 >UniRef50_B9K0P3 ABC transporter membrane spanning protein (Oligopeptide) n=3 Tax=Bacteria RepID=B9K0P3_AGRVS Length = 307 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 128/339 (37%), Positives = 204/339 (60%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML I +RL + + T + + +L+ +H++PGDPV M + SP+ AQ+ A+LGLD Sbjct: 1 MLVLIFKRLLIALATIVSVIILSGILIHIVPGDPVTAMMAQSVTASPQAMAQMRAKLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+WQQ Y W V GDLG++++ PV + R T L V + A A+GIP+G Sbjct: 61 LPVWQQVGLYTWHVFQGDLGMTIRGNEPVARLLLQRLPNTFALAVSGLGVALAIGIPLGF 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+ RG + D + +A+ G S+P FW+G+++I + S+ PV+G Sbjct: 121 LAAIHRGKLTDTAVMVIAVLGVSIPGFWFGLIMIQVFSLKLGWFPVAG------------ 168 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ++ILPA+ LG A++ RMTRS+++EVL EDYIRT Sbjct: 169 --------------------SGFRNIILPALTLGLTYCALVARMTRSALVEVLAEDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA+GL +V++VHAL+ A++ +VTV+GL LL G ++ E +FSW G+GR + A+ Sbjct: 209 ARARGLREYQVLLVHALKPALISIVTVVGLVFAYLLGGQVIIENVFSWNGIGRLAVQAML 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QG +++ A+ +++V++L+D+LYG ++PR+R + Sbjct: 269 ERDYPMIQGFIVVFASSVVIVSMLIDILYGFLDPRMRQR 307 >UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=2 Tax=Bacillaceae RepID=B1HP02_LYSSC Length = 476 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 122/337 (36%), Positives = 184/337 (54%), Gaps = 31/337 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 LQFI+ R+ +G+ L F +++ P DP + G + E+ A GLD+P Sbjct: 167 LQFIIERILQSFIVIVGVATLVFTILYLSPFDPARNLLGVEA-TAEQIANFNRIHGLDQP 225 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 Q H + G+ DLG S + + +F TLE+ V +++ A A+ IPVG+++ Sbjct: 226 YLSQLWHSLSGLFTFDLGTSFAGKEDITHSITNKFPVTLEIAVLSLLMAIAIAIPVGIIS 285 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV+ S D+T + +AL G S+P FW G++ I+ ++ P + + + Sbjct: 286 AVRPNSYLDYTFMFIALIGLSIPSFWQGLIFILTFALKLQWFPATYNPQNWL-------- 337 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +I+P IVLGT A I RMTRSSMLEV+ EDYI TA+ Sbjct: 338 ----------------------SLIMPVIVLGTSITASIARMTRSSMLEVIHEDYIITAK 375 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL +VI HA+RNAM+P++TVIGL G +L GA +TE +F+ G+G +++D Sbjct: 376 AKGLNEFKVISKHAIRNAMIPIITVIGLLFGGMLGGASVTEKVFNISGIGSYIVDKQFIP 435 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P + GGV+ +A I +VNLL+D++Y +PRIR K Sbjct: 436 DIPAILGGVVYIAITISIVNLLIDIMYAFFDPRIRSK 472 >UniRef50_A8F7C8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F7C8_THELT Length = 339 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 192/337 (56%), Gaps = 2/337 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++ + RL + G+ L+ + ++P DP + G + +L LD P Sbjct: 4 LRYSVSRLISSLIVIFGVILVVYVISAVVPSDPAALWVGPHP-TYSALQNAREKLKLDLP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +++++ ++ ++ GDLGIS+++ PV ++ F AT EL + + A +GI +GV A Sbjct: 63 LFERFFYFFKDLLRGDLGISIRTHNPVSQDIFKAFGATFELILFSEFLAIIIGIILGVYA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL-DDSNP 180 V + + D A+ G S+P FW+GM+L ++ + + P+S R+ +V L + Sbjct: 123 GVYQNKLPDSINRIFAVAGVSLPGFWFGMILQLIFFKYLGILPLSDRIDIVVSLTNPFKE 182 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF LIDT I F+D + H+ILPAI L P+ +I R RS M+EVL E+YIRT+ Sbjct: 183 ITGFYLIDTLIDRNIPAFVDVLKHLILPAITLSVYPIGLITRQVRSMMIEVLNENYIRTS 242 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G+ + ++ +AL+NA+ P + + L L GA L E IF+WPGLGR+ +++ Sbjct: 243 IAYGIPKRKIYFQYALKNAIAPAMVTVALSFAYTLVGAFLVELIFNWPGLGRYAANSILS 302 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYP + G L+V+ +L+N +VD+L ++PRI++ Sbjct: 303 MDYPAIVGVTLVVSITYVLINFVVDILQAKIDPRIKY 339 >UniRef50_A3ZVY1 Oligopeptide ABC transporter permease protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVY1_9PLAN Length = 302 Score = 328 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 131/310 (42%), Positives = 193/310 (62%), Gaps = 8/310 (2%) Query: 30 IPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVW 89 +PG+P + G+ + A++ + G D+P+ Q + ++ GDLG+S V Sbjct: 1 MPGNPALARFGQHSVPARVTAEMAHQ-GWDRPILAQLIDLPGELLRGDLGVSFFHGDQVA 59 Query: 90 EEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWG 149 E ATLEL + A++ A +GI GV +A+ RGS D+ A+ AL G S+P+F+ G Sbjct: 60 ERLTETIPATLELSIAAILLAVPLGICAGVASALWRGSWPDYAAMTFALLGVSVPVFFLG 119 Query: 150 MMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPA 209 + L+ + + P SGRV+ + S T F L + G +DAV H++LPA Sbjct: 120 ICLMTIFTSM----PTSGRVAPTMI---SQFHTDFFLCEAIFTGRFALALDAVRHLLLPA 172 Query: 210 IVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGL 269 + L TIP AVI R+TRSSMLEVL DY+RTA+AKG T R++ HAL NA +P+V + G Sbjct: 173 VALATIPAAVISRITRSSMLEVLSSDYLRTAKAKGATLWRIVWRHALPNASVPIVNIAGF 232 Query: 270 QVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYG 329 QVG LL+GA+LTET+F+WPG+GR+L+ A++ +DY VVQGG L++A M + NLL+D+ Y Sbjct: 233 QVGMLLSGAVLTETVFNWPGMGRYLVTAVREQDYAVVQGGALVIAAMFVTANLLLDIAYL 292 Query: 330 VVNPRIRHKK 339 ++PRIR + Sbjct: 293 WLDPRIRTQS 302 >UniRef50_B6JJM3 Inner membrane ABC transporter permease protein YddR n=5 Tax=Bacteria RepID=B6JJM3_OLICO Length = 309 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 193/338 (57%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ ++ +RL + +G+ L F +H+ GDP ++ S E A +G + Sbjct: 1 MISYLAKRLLQALLVLLGVMTLVFFLLHLS-GDPTQLLLPMDA-SAEERAAFRLRMGFND 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL + + V+ G+LG S + P + AT +L A++ AT + +P+GV+ Sbjct: 59 PLPLQYLRFAYDVITGNLGFSYRHSEPAVYMVLDHLPATFQLTGSALLIATCLAVPIGVI 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRGS D A+GLAL G +MP++W G+MLI+L SV P GR Sbjct: 119 AAVKRGSALDSIAMGLALLGQAMPVYWLGLMLILLFSVQLQWLPSGGR------------ 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPA L +A I R+TRS ML+VL +DYIRTA Sbjct: 167 -------------------SGLETLILPAATLAVFSMARIARLTRSGMLDVLSQDYIRTA 207 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ VI LRNA +P++TVIGL+ G LL GA++TETIF+WPG+GR +D++ Sbjct: 208 RAVGIPTRTVIFKFGLRNAAIPLITVIGLEFGVLLGGAVITETIFAWPGVGRLAVDSIFA 267 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQ VL++A++ +L+N+ VD+LY ++PRIR Sbjct: 268 RDYPVVQAVVLVLASIFVLINITVDVLYTYMDPRIREG 305 >UniRef50_Q7MPW1 ABC-type transport system, permease component n=36 Tax=Bacteria RepID=Q7MPW1_VIBVY Length = 341 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 177/355 (49%), Gaps = 32/355 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA-----------------GERG 43 ML + LRRL LVIPTF+GIT+L FA +PG PV M G Sbjct: 1 MLSYFLRRLALVIPTFLGITILIFAITRFVPGGPVERMLSKMQAQGDGAAAMTTAGGNSA 60 Query: 44 ISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELG 103 +S E+ A+L A GLDKP+ Q YL ++ ++ D G S + PV + R +L G Sbjct: 61 LSEEQMAELNAFYGLDKPVAQAYLDWLSKLVRLDFGESTRYYEPVGDMIAERLPVSLFYG 120 Query: 104 VCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLT 163 + + IP+G A++ GS+FD + L GY++P + G++LI L S H Sbjct: 121 GMTFFISYFISIPLGYYKALRHGSVFDSASSILIFVGYALPGYVVGVLLITLFSYHLEWF 180 Query: 164 PVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRM 223 P+ G V D ++ D + H +LP I A + Sbjct: 181 PMGGFVGDDFDDLETF---------------FERAKDVMWHAVLPLICYLIGDFATLTLT 225 Query: 224 TRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTET 283 +++++E L DYIRTA AKGL + HALRN+++P+ + G + + GA L E Sbjct: 226 MKNNLMENLSSDYIRTAIAKGLPFKTAVRKHALRNSLIPIASHFGNSLLFFMTGAFLIEV 285 Query: 284 IFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 IF+ G+G +++ RDYPVV G V + A +++L N++ D+ +V+PR++ Sbjct: 286 IFNIDGIGLLGYESIIERDYPVVMGIVAINAVLLLLGNIISDVCVALVDPRVKFG 340 >UniRef50_B2A0S4 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0S4_NATTJ Length = 329 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 120/336 (35%), Positives = 185/336 (55%), Gaps = 15/336 (4%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+LRR+G VI + + + F ++PGDP M + +S E + GLD+P+ Sbjct: 9 RFVLRRIGQVIISLFIVATIVFFLFRLLPGDPTAAMM-QPEMSSEAQEMIRERFGLDRPL 67 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 +QYL Y+ ++ GD GIS R+PV + TL L A+ A G+ +G L + Sbjct: 68 HEQYLAYMVNLLQGDFGISFHYRLPVSQVIGTYILNTLWLMFSAIAVAYIGGVLIGGLMS 127 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 RGS + G L S+P F+ GM+ IM+ S ++ L P SG S Sbjct: 128 WYRGSRLETFLSGGVLFCRSLPPFFLGMVGIMVFSFYFELLPHSGMRSPGA--------- 178 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 + + E +D + H+ILP + LA + R++MLE+ G D++ ARA Sbjct: 179 -----NPVGFVETYLNLDFLYHLILPVAMSSLYYLARPTLIMRNNMLELRGADFVELARA 233 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL + RVI +HA RNA+LPV+T + L +G + A+ E +F WPGLGR ++ A Q RD Sbjct: 234 KGLRQSRVIYLHAARNAILPVITNLALFLGMAIGAAVAVEYVFGWPGLGREMVRAAQLRD 293 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP+ Q L++A ++++NLLVD+LYG ++PRI ++ Sbjct: 294 YPLAQACFLMLAAKVMVLNLLVDILYGYLDPRITYE 329 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AEG0 Dipeptide transport system permease protein dppB... 442 e-122 UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria Rep... 433 e-120 UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella l... 427 e-118 UniRef50_P94311 Dipeptide transport system permease protein dppB... 421 e-116 UniRef50_P42062 Oligopeptide transport system permease protein a... 416 e-115 UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD 413 e-114 UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteri... 411 e-113 UniRef50_C0GHX4 Binding-protein-dependent transport systems inne... 410 e-113 UniRef50_D2LLS4 Binding-protein-dependent transport systems inne... 409 e-113 UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipep... 405 e-112 UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepI... 405 e-111 UniRef50_A6TS96 Binding-protein-dependent transport systems inne... 399 e-109 UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport... 398 e-109 UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport... 398 e-109 UniRef50_D1Y6N0 Oligopeptide transport system permease protein A... 396 e-109 UniRef50_D1Y1A5 Probable D,D-dipeptide transport system permease... 395 e-109 UniRef50_B9L1W1 Dipeptide transport system permease protein dppB... 394 e-108 UniRef50_C8WR99 Binding-protein-dependent transport systems inne... 394 e-108 UniRef50_Q0T6D1 Glutathione transport system permease protein gs... 393 e-108 UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette t... 393 e-108 UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepI... 393 e-108 UniRef50_Q28JR5 Binding-protein-dependent transport systems inne... 392 e-107 UniRef50_A0LI52 Binding-protein-dependent transport systems inne... 392 e-107 UniRef50_D1CAI4 Binding-protein-dependent transport systems inne... 392 e-107 UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerot... 391 e-107 UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacte... 390 e-107 UniRef50_A6TPC4 Binding-protein-dependent transport systems inne... 389 e-107 UniRef50_C0ZDH7 ABC transporter permease protein n=2 Tax=Breviba... 389 e-106 UniRef50_Q9V2D1 Binding protein-dependent transport system, inne... 388 e-106 UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=... 388 e-106 UniRef50_B8E2R5 Binding-protein-dependent transport systems inne... 388 e-106 UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport... 388 e-106 UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepI... 388 e-106 UniRef50_D1B7J8 Binding-protein-dependent transport systems inne... 386 e-106 UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteri... 386 e-106 UniRef50_A8F6T0 Binding-protein-dependent transport systems inne... 386 e-106 UniRef50_D1C9Y6 Binding-protein-dependent transport systems inne... 386 e-106 UniRef50_UPI0001C354AE putative ABC-transporter permease protein... 386 e-106 UniRef50_A9WKA7 Binding-protein-dependent transport systems inne... 386 e-106 UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncult... 385 e-106 UniRef50_C8W4W6 Binding-protein-dependent transport systems inne... 385 e-105 UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostri... 385 e-105 UniRef50_B3EH22 Binding-protein-dependent transport systems inne... 384 e-105 UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport... 383 e-105 UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC trans... 383 e-105 UniRef50_D1Y609 ABC transporter, permease protein n=1 Tax=Pyrami... 383 e-105 UniRef50_A2SRD5 Binding-protein-dependent transport systems inne... 382 e-105 UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Ba... 382 e-104 UniRef50_A8F4X4 Binding-protein-dependent transport systems inne... 382 e-104 UniRef50_D2RRT8 Binding-protein-dependent transport systems inne... 381 e-104 UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclass... 381 e-104 UniRef50_A1WQT8 Binding-protein-dependent transport systems inne... 381 e-104 UniRef50_C4WPT9 Dipeptide transport system permease protein dppB... 381 e-104 UniRef50_D1C9E9 Binding-protein-dependent transport systems inne... 381 e-104 UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerot... 381 e-104 UniRef50_C9M8R7 Glutathione ABC transporter, permease protein Gs... 380 e-104 UniRef50_A6M0G0 Binding-protein-dependent transport systems inne... 380 e-104 UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n... 380 e-104 UniRef50_Q2YJK1 Putative peptide transport system permease prote... 380 e-104 UniRef50_A6TPV5 Binding-protein-dependent transport systems inne... 379 e-104 UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Ta... 378 e-103 UniRef50_UPI00019735EB peptide ABC transporter permease protein ... 376 e-103 UniRef50_D2ASJ6 Binding-protein-dependent transport systems inne... 376 e-103 UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component... 376 e-103 UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41... 376 e-103 UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipe... 376 e-103 UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oc... 375 e-103 UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzi... 375 e-103 UniRef50_A6X362 Binding-protein-dependent transport systems inne... 375 e-102 UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Breviba... 375 e-102 UniRef50_C5EKW0 Glutathione transport system permease protein gs... 374 e-102 UniRef50_A9B5L6 Binding-protein-dependent transport systems inne... 374 e-102 UniRef50_C0D8X7 Putative uncharacterized protein n=2 Tax=Clostri... 374 e-102 UniRef50_D1C940 Binding-protein-dependent transport systems inne... 374 e-102 UniRef50_C0QDJ0 DppB1 n=74 Tax=Bacteria RepID=C0QDJ0_DESAH 373 e-102 UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostri... 373 e-102 UniRef50_D1C147 Binding-protein-dependent transport systems inne... 372 e-102 UniRef50_B9ZI20 Binding-protein-dependent transport systems inne... 372 e-102 UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH 372 e-101 UniRef50_B3QZ99 Binding-protein-dependent transport systems inne... 371 e-101 UniRef50_Q6ML30 Dipeptide transport system permease protein DppB... 371 e-101 UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteob... 371 e-101 UniRef50_B0PE95 Putative uncharacterized protein n=1 Tax=Anaerot... 370 e-101 UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax... 370 e-101 UniRef50_C6WWB7 Binding-protein-dependent transport systems inne... 370 e-101 UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicu... 370 e-101 UniRef50_A4XIA7 Nickel-transporting ATPase n=21 Tax=Firmicutes R... 369 e-101 UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n... 369 e-101 UniRef50_UPI0001C36066 binding-protein-dependent transport syste... 369 e-101 UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=... 369 e-101 UniRef50_A6TTE0 Binding-protein-dependent transport systems inne... 369 e-100 UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bac... 368 e-100 UniRef50_B3TCI4 Putative binding-protein-dependent transport sys... 368 e-100 UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdema... 368 e-100 UniRef50_C5BVI8 Binding-protein-dependent transport systems inne... 368 e-100 UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter... 368 e-100 UniRef50_Q53191 Probable peptide ABC transporter permease protei... 367 e-100 UniRef50_Q1ARP2 Binding-protein-dependent transport systems inne... 367 e-100 UniRef50_A1WN48 Binding-protein-dependent transport systems inne... 366 e-100 UniRef50_C7P3N9 Binding-protein-dependent transport systems inne... 366 e-100 UniRef50_A8U4H5 Binding-protein-dependent transport systems inne... 366 e-100 UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein A... 365 1e-99 UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostri... 365 1e-99 UniRef50_D1CEI4 Binding-protein-dependent transport systems inne... 365 2e-99 UniRef50_Q46ER9 Oligopeptide ABC transporter, permease protein n... 364 2e-99 UniRef50_Q1GD19 Binding-protein-dependent transport systems inne... 364 3e-99 UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Ta... 364 3e-99 UniRef50_A8F7V7 Binding-protein-dependent transport systems inne... 364 3e-99 UniRef50_D1WR30 Binding-protein-dependent transport systems inne... 363 4e-99 UniRef50_B9ZIL3 Binding-protein-dependent transport systems inne... 363 4e-99 UniRef50_B8J041 Binding-protein-dependent transport systems inne... 363 5e-99 UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bactero... 363 7e-99 UniRef50_A4F975 ABC-transport protein, membrane component n=2 Ta... 362 9e-99 UniRef50_B9LRN3 Binding-protein-dependent transport systems inne... 361 1e-98 UniRef50_C9RY28 Binding-protein-dependent transport systems inne... 361 1e-98 UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC trans... 361 2e-98 UniRef50_UPI0000E87C5E peptide ABC transporter, permease protein... 361 2e-98 UniRef50_C8Q8F0 Binding-protein-dependent transport systems inne... 361 2e-98 UniRef50_B3TC47 Putative binding-protein-dependent transport sys... 361 3e-98 UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport... 361 3e-98 UniRef50_A8S2V4 Putative uncharacterized protein n=1 Tax=Clostri... 360 4e-98 UniRef50_D1CA61 Binding-protein-dependent transport systems inne... 360 4e-98 UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligo... 359 6e-98 UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT f... 359 7e-98 UniRef50_A3IB67 Dipeptide transport system permease protein dppB... 359 7e-98 UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n... 359 8e-98 UniRef50_B2SC63 Binding-protein-dependent transport systems inne... 359 9e-98 UniRef50_UPI0001C31351 binding-protein-dependent transport syste... 359 1e-97 UniRef50_B8F5L4 ABC-type oligopeptide transport system, periplas... 359 1e-97 UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane c... 358 1e-97 UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11... 358 1e-97 UniRef50_Q5E4F5 Oligopeptide transport system permease protein O... 358 1e-97 UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 ... 358 2e-97 UniRef50_A1WJE8 Binding-protein-dependent transport systems inne... 358 2e-97 UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport... 358 2e-97 UniRef50_Q211A7 Binding-protein-dependent transport systems inne... 357 3e-97 UniRef50_A1SP55 Binding-protein-dependent transport systems inne... 357 3e-97 UniRef50_D1C3Y0 Binding-protein-dependent transport systems inne... 357 4e-97 UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Ta... 356 5e-97 UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease... 356 1e-96 UniRef50_B9L4I6 Oligopeptide transport system permease protein A... 355 1e-96 UniRef50_A7NQN2 Binding-protein-dependent transport systems inne... 355 1e-96 UniRef50_Q65HR2 Oligopeptide ABC transporter (Permease) n=2 Tax=... 355 1e-96 UniRef50_C0G1A9 Binding-protein-dependent transport systems inne... 355 1e-96 UniRef50_Q67T60 Oligopeptide ABC transporter permease protein n=... 354 2e-96 UniRef50_A9EE52 Binding-protein-dependent transport systems inne... 354 2e-96 UniRef50_D0RFR0 Binding-protein-dependent transport system inner... 354 2e-96 UniRef50_A4J1I5 Binding-protein-dependent transport systems inne... 354 2e-96 UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n... 354 2e-96 UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 ... 354 3e-96 UniRef50_A7NQN7 Binding-protein-dependent transport systems inne... 353 4e-96 UniRef50_O58538 323aa long hypothetical oligopeptide transport p... 353 4e-96 UniRef50_C7RF10 Binding-protein-dependent transport systems inne... 353 5e-96 UniRef50_A9KKM2 Binding-protein-dependent transport systems inne... 353 6e-96 UniRef50_C8W528 Binding-protein-dependent transport systems inne... 352 8e-96 UniRef50_B6JJN3 Dipeptide transport system permease protein DppB... 352 1e-95 UniRef50_B9JQI2 Inner membrane component of binding-protein-depe... 352 1e-95 UniRef50_Q28NH1 Binding-protein-dependent transport systems inne... 352 1e-95 UniRef50_A9BP21 Binding-protein-dependent transport systems inne... 352 1e-95 UniRef50_C0GIS4 Binding-protein-dependent transport systems inne... 351 1e-95 UniRef50_B1MFX6 Probable dipeptide-transport integral membrane p... 351 2e-95 UniRef50_P0AFH4 Oligopeptide transport system permease protein o... 351 2e-95 UniRef50_C1DVB5 Oligopeptide transport system permease protein A... 351 2e-95 UniRef50_B9ZIB5 Binding-protein-dependent transport systems inne... 351 2e-95 UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax... 351 3e-95 UniRef50_A8Z099 Oligopeptide ABC superfamily ATP binding cassett... 351 3e-95 UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport... 350 3e-95 UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport... 350 4e-95 UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Ta... 350 5e-95 UniRef50_C9M9U0 Oligopeptide ABC transporter, permease protein n... 350 5e-95 UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette t... 349 5e-95 UniRef50_A6UJW3 Binding-protein-dependent transport systems inne... 349 6e-95 UniRef50_Q3IPR7 ABC-type transport system permease protein (Prob... 349 7e-95 UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 T... 349 7e-95 UniRef50_C4WPU5 Dipeptide transport system permease protein dppB... 349 8e-95 UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizob... 349 1e-94 UniRef50_Q28M48 Binding-protein-dependent transport systems inne... 349 1e-94 UniRef50_C6A3B4 ABC-type dipeptide transport system, permease co... 349 1e-94 UniRef50_Q1LMX8 Binding-protein-dependent transport systems inne... 349 1e-94 UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collins... 349 1e-94 UniRef50_C0AEM4 Nickel-transporting ATPase n=1 Tax=Opitutaceae b... 348 1e-94 UniRef50_Q21J40 Binding-protein-dependent transport systems inne... 348 1e-94 UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 ... 348 1e-94 UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bact... 348 1e-94 UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bact... 348 2e-94 UniRef50_B2Z3S7 ABC transporter permease protein n=3 Tax=Rhizobi... 348 2e-94 UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID... 348 2e-94 UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease... 348 2e-94 UniRef50_Q11BX9 Binding-protein-dependent transport systems inne... 348 2e-94 UniRef50_A6X471 Binding-protein-dependent transport systems inne... 348 2e-94 UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropy... 348 2e-94 UniRef50_A9BGI2 Binding-protein-dependent transport systems inne... 348 2e-94 UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobac... 348 3e-94 UniRef50_C7Q863 Binding-protein-dependent transport systems inne... 348 3e-94 UniRef50_Q6MQU8 Peptide ABC transporter, permease protein n=1 Ta... 347 3e-94 UniRef50_B0PEI0 Putative uncharacterized protein n=1 Tax=Anaerot... 347 3e-94 UniRef50_Q1GIR9 Binding-protein-dependent transport systems inne... 347 3e-94 UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9A... 346 5e-94 UniRef50_P24138 Oligopeptide transport system permease protein o... 346 5e-94 UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Ta... 346 6e-94 UniRef50_Q2FPT2 Binding-protein-dependent transport systems inne... 346 7e-94 UniRef50_P77308 Probable D,D-dipeptide transport system permease... 346 7e-94 UniRef50_A1T284 Binding-protein-dependent transport systems inne... 346 9e-94 UniRef50_Q46AX7 ABC transporter, permease protein n=3 Tax=Methan... 345 1e-93 UniRef50_C3WH40 Peptide ABC transporter permease n=6 Tax=Fusobac... 345 1e-93 UniRef50_A8M8L4 Binding-protein-dependent transport systems inne... 345 2e-93 UniRef50_C5ET18 Oligopeptide transport system permease protein a... 344 2e-93 UniRef50_D1Y243 Oligopeptide transport system permease protein A... 344 3e-93 UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteo... 344 4e-93 UniRef50_UPI0001C313C7 binding-protein-dependent transport syste... 343 5e-93 UniRef50_D1A5X3 Binding-protein-dependent transport systems inne... 343 6e-93 UniRef50_Q11FQ8 Binding-protein-dependent transport systems inne... 343 6e-93 UniRef50_C7Q7C7 Binding-protein-dependent transport systems inne... 343 7e-93 UniRef50_A6X1T0 Binding-protein-dependent transport systems inne... 343 7e-93 UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Acidul... 343 8e-93 UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligo... 343 8e-93 UniRef50_Q0BY86 Oligopeptide ABC transporter, permease protein n... 342 9e-93 UniRef50_B9KBE7 Oligopeptide ABC transporter, permease protein n... 342 1e-92 UniRef50_C7HA74 Glutathione ABC transporter, permease protein Gs... 342 1e-92 UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, memb... 342 1e-92 UniRef50_A6NRE3 Putative uncharacterized protein n=2 Tax=Bacteri... 342 1e-92 UniRef50_C9KNL5 Oligopeptide ABC transporter, permease protein A... 342 1e-92 UniRef50_B1XIM7 Binding-protein-dependent transport systems inne... 342 1e-92 UniRef50_B9K0P3 ABC transporter membrane spanning protein (Oligo... 342 1e-92 UniRef50_C7QKP4 Binding-protein-dependent transport systems inne... 342 1e-92 UniRef50_A7BKM5 Peptide ABC transporter, permease protein n=1 Ta... 342 1e-92 UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=... 341 2e-92 UniRef50_Q98AA8 ABC transporter, permease n=1 Tax=Mesorhizobium ... 341 2e-92 UniRef50_A3Y4Z9 Oligopeptide ABC transporter, permease protein n... 341 2e-92 UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter... 341 2e-92 UniRef50_C0ZIB9 Dipeptide ABC transporter permease protein n=35 ... 341 2e-92 UniRef50_B6JJM3 Inner membrane ABC transporter permease protein ... 341 3e-92 UniRef50_Q73QP9 Oligopeptide/dipeptide ABC transporter, permease... 341 3e-92 UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostri... 341 3e-92 UniRef50_Q46B30 Oligopeptide ABC transporter, permease protein n... 340 3e-92 UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligo... 340 3e-92 UniRef50_C7G7D5 Oligopeptide ABC transporter, permease protein A... 340 4e-92 UniRef50_UPI0001C31B38 binding-protein-dependent transport syste... 340 5e-92 UniRef50_Q28KP0 Binding-protein-dependent transport systems inne... 339 6e-92 UniRef50_B2KE39 Binding-protein-dependent transport systems inne... 339 6e-92 UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B... 339 7e-92 UniRef50_A0QRE3 Dipeptide transport system permease protein DppB... 339 8e-92 UniRef50_A9EXW6 Binding-protein-dependent transport systems inne... 339 9e-92 UniRef50_A9B400 Binding-protein-dependent transport systems inne... 339 9e-92 Sequences not found previously or not previously below threshold: UniRef50_B2A2W9 Binding-protein-dependent transport systems inne... 373 e-102 UniRef50_B1ZSA3 Nickel-transporting ATPase n=2 Tax=Verrucomicrob... 359 9e-98 UniRef50_D2RV85 Binding-protein-dependent transport systems inne... 354 2e-96 UniRef50_B1KW82 Nickel transport system permease protein NikB n=... 345 2e-93 UniRef50_Q1R133 Binding-protein-dependent transport systems inne... 343 4e-93 UniRef50_C6D1X8 Binding-protein-dependent transport systems inne... 342 1e-92 >UniRef50_P0AEG0 Dipeptide transport system permease protein dppB n=302 Tax=Bacteria RepID=DPPB_ECO57 Length = 339 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK Sbjct: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL Sbjct: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA Sbjct: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 >UniRef50_A6VRH6 Nickel-transporting ATPase n=17 Tax=Bacteria RepID=A6VRH6_MARMS Length = 336 Score = 433 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 215/339 (63%), Positives = 278/339 (82%), Gaps = 3/339 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI RRL LVIPTFIGITLLTF + +IPGDP+ +MAGERG+S ERHA+L A+LG D+ Sbjct: 1 MFQFIFRRLSLVIPTFIGITLLTFTLIRLIPGDPIEVMAGERGVSAERHAELSAQLGFDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY HY+ GV+ GDLG S+ +R PV +EF+ F AT+EL CA IFA +G+P G+ Sbjct: 61 PLYVQYYHYVTGVLQGDLGNSLITREPVMKEFLTLFPATIELAFCAAIFAILIGLPAGIF 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRG++ DH+ + +LTGYSMPIFWW ++L+++ SV+ TPVSGR+ + + Sbjct: 121 AAVKRGTVIDHSVMTFSLTGYSMPIFWWALLLMLVFSVNLGWTPVSGRIDVVY---WIDD 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGFMLID+ + GE+G F AV+H+ILP+IVLGTIP+AVI RMTRSSMLEVL EDYIRTA Sbjct: 178 VTGFMLIDSILSGEEGAFASAVSHLILPSIVLGTIPMAVIARMTRSSMLEVLSEDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI++HALRNA++PV+TVIGLQVG LL+GAILTET+F+WPG+G+WLI+++ R Sbjct: 238 RAKGIAPWRVIVIHALRNALIPVITVIGLQVGILLSGAILTETVFAWPGIGKWLIESIGR 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPVVQGG+L+VA +II+VNLLVD+ YG+VNPRIRH + Sbjct: 298 RDYPVVQGGILIVACIIIVVNLLVDITYGIVNPRIRHSR 336 >UniRef50_C8WGF2 Nickel-transporting ATPase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGF2_EGGLE Length = 339 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 161/338 (47%), Positives = 231/338 (68%), Gaps = 4/338 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++IL+R+ +VIP +G+T++ F ++ DP ++ GE + E A A+ GLD Sbjct: 1 MLKYILKRILMVIPVLLGVTVIIFLITRVLAPDPAPVVLGEHATT-EAMAAWRADNGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY+++I G + G+LG S + PV E RF AT EL +CA+I A+ VG+ +GVL Sbjct: 60 PIWLQYINFIVGALQGNLGTSYYTHQPVTAEIAARFPATAELAICAIIVASIVGVALGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ D+ ++ +AL G SMPIFW G++LI+L S + P SGRVS ++ Sbjct: 120 AAVKKNKAADNVSMLIALVGVSMPIFWSGILLILLFSGILHWLPSSGRVSPLLQPSGG-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TGF ++DT + G D + H+ILP + L +A+I RMTRSSMLE L DYIRTA Sbjct: 178 -TGFFILDTIMQGNWAGLADVLVHLILPTLALSLYSMAIITRMTRSSMLETLNADYIRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL++ V I HALRNAMLPV TVIGLQ G+LL GA+LTET+F+WPG+G++ +D + + Sbjct: 237 RAKGLSKGSVNIKHALRNAMLPVSTVIGLQFGSLLGGALLTETVFAWPGIGKFAVDCVLK 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+PVVQG VLLVA + +++NL+VD++Y ++PRI++ Sbjct: 297 SDFPVVQGIVLLVAVIFVIMNLVVDIVYAYLDPRIKYG 334 >UniRef50_P94311 Dipeptide transport system permease protein dppB n=8 Tax=Bacteria RepID=DPPB_BACPF Length = 333 Score = 421 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 163/337 (48%), Positives = 229/337 (67%), Gaps = 4/337 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RRL L+IP IG+T++TF+ +H+IPG+P + GE+ SP+ A L LGL++ Sbjct: 1 MLAYAMRRLLLLIPVLIGMTIVTFSIIHLIPGNPAQTILGEQA-SPQAIADLEERLGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W QY Y+ + GDLG S+++ P+ EE P AT+EL + AMIFA +G+ G++ Sbjct: 60 PYWVQYGLYMKDLATGDLGTSLRTNKPIMEEIWPYLAATIELTIFAMIFAIIIGVNAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ S FD+ ++ +AL G SMPIFW +M + + P GR + D Sbjct: 120 SAWKQNSWFDYLSMFIALVGVSMPIFWLALMEQWIFAQELGWLPAFGRDNPR---DPIIS 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TG + DT I G+ +++ H+ILP I LGTIP+A+I RMTRSSMLEVL DYIRT Sbjct: 177 TTGLYVFDTIISGQFDKTWESIKHLILPGIALGTIPMAIIARMTRSSMLEVLRSDYIRTV 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG + VI HAL+NA++PV+TV+GLQ G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 237 NAKGSGQGVVIYKHALKNALIPVLTVVGLQTGNLLGGAILTETIFSWPGIGRYIFEAINY 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+Q G+L+VAT+ +L+NL VDLLY ++PRI++ Sbjct: 297 RDYPVIQSGILVVATIFVLINLFVDLLYSYIDPRIKY 333 >UniRef50_P42062 Oligopeptide transport system permease protein appB n=4 Tax=Bacillaceae RepID=APPB_BACSU Length = 316 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RR + IP +GIT+L+F + PGDP+ +M + IS Q + + GL+ Sbjct: 1 MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMTLMM-DPKISQADREQFIEKYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + QYL ++ ++ GD G S+ + PV E + R TL L + + I A + IP GV Sbjct: 60 PQYVQYLKWLGNMVQGDFGTSIVRKGTPVSELIMARLPNTLLLMLVSTILALMISIPFGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW+G++LIM++SV+ P G + Sbjct: 120 LSAKRPYSKIDYGITFTSFIGLAIPNFWFGLILIMVLSVNLGWFPTGGVETLNTEF---- 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 N D + H+ILPA VL T +A + R TRS+ML+VL +DYIRT Sbjct: 176 -----------------NIFDRIHHLILPAFVLATADMAGLTRYTRSNMLDVLNQDYIRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRNA+LPV+T+ GL + + + G+++ E IF+WPGLG+ +D+ Sbjct: 219 ARAKGFKENRVLFKHGLRNALLPVITIFGLMIPSFIGGSVVVEQIFTWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ A ++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISAVLVVVGNLIADILYAIVDPRIEY 316 >UniRef50_Q65LC9 AppB n=5 Tax=Bacillus RepID=Q65LC9_BACLD Length = 316 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 126/338 (37%), Positives = 198/338 (58%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I+RR + IP GIT+L+FA + PGDP+ +M + IS + + + GLD+ Sbjct: 1 MITYIIRRTLMSIPILFGITILSFAIMKAAPGDPMALMM-DPTISAGDREKFIEKYGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P QYL ++ ++ GD G S+ + PV + + R TL L + + I A + IP+GV Sbjct: 60 PEHVQYLKWLGNMVQGDFGTSIVRKGTPVTDLIMARLPNTLLLMLVSTILALLISIPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A + S D+ + G ++P FW G++LIM ++V+ P G ++ Sbjct: 120 LSARRPYSKLDYGITFTSFIGLAVPNFWLGLILIMFLAVNLGWFPTGGVMTLNADF---- 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + D + H+ILPA VL T +A + R TRSSML+VL +DY+RT Sbjct: 176 -----------------SLWDRIHHLILPAFVLATADMAGLTRYTRSSMLDVLRQDYMRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG RV+ H LRN +LPV+T+ GL + + + GA++TE IFSWPGLG+ +D+ Sbjct: 219 ARAKGFKENRVVYKHGLRNGLLPVITIFGLMIPSFIGGAVVTEQIFSWPGLGKLFVDSAF 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +RDYPV+ ++ AT++++ NL+ D+LY +V+PRI + Sbjct: 279 QRDYPVIMAMTVISATLVVIGNLVADILYAMVDPRIEY 316 >UniRef50_A6NZV2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NZV2_9BACE Length = 337 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 134/338 (39%), Positives = 214/338 (63%), Gaps = 4/338 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I +RL IP + + ++ F ++PGDP GE + E+ QL E GL+ P Sbjct: 3 LKYIAKRLLYAIPAVVLVVIIIFLLTRVMPGDPARAYLGEMA-TEEQVEQLREEWGLNDP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q++ Y+ G++HGD G S ++ V +F+ R A+LEL + A+ A +G+P+G+ + Sbjct: 62 LPVQFVRYVSGILHGDFGYSNRTHDTVLNDFIKRIPASLELALWALAIAILIGVPLGIAS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPV-SGRVSDMVFLDDSNP 180 A + S DH A ++ G +MP+FW+G+MLI++ + T +GR+S + Sbjct: 122 ATHKNSPLDHGARIFSMLGATMPVFWFGLMLILIFYATLHWTVAPTGRISMGINPP--TT 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ++D+ + G+ D++AH+ILPAI L +AV+ RMTR+SMLEVLG+DYIRTA Sbjct: 180 ITGMYVLDSILTGDMVALKDSLAHIILPAITLSMSTMAVMARMTRASMLEVLGQDYIRTA 239 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P++TV+G Q G +L ++ ETIFSWPG+G ++ DA+ Sbjct: 240 RAKGMKERIVIYRHALRNALIPILTVLGGQFGMMLGYTVVVETIFSWPGIGFYVTDAILN 299 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY VQ L A + +++NL++D+LY VV+ R+++ Sbjct: 300 VDYNPVQAFALFSALLYVVINLVLDILYTVVDRRVKYD 337 >UniRef50_C0GHX4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHX4_9FIRM Length = 329 Score = 410 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 114/338 (33%), Positives = 186/338 (55%), Gaps = 10/338 (2%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I+RR+ + I + + I+ LTF + + PG PV A IS ++ +GLD+ Sbjct: 1 MRNKIVRRIAMSILSLLVISALTFFLMELAPGTPVSRYADNPRISRADRERIEKNMGLDR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y ++ GDLG+S + PV +E + R ATL L + + A + +P+G+ Sbjct: 61 PAHIRYFIWLRNAAQGDLGLSYMTGQPVSQEIMARLPATLRLMGASFLVALIIAVPLGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A +R SI D + G S+P FW+G++LI + +V P G+++ P Sbjct: 121 SATRRHSIVDSVLTAGSYLGLSVPAFWFGLILIYIFAVWLRWLPAGGQMTPWFDPSVFPP 180 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 T + + HMI+P VL +A R RSSML+V+ ++YIRTA Sbjct: 181 FT----------RPFALLWEYIRHMIMPVFVLSLSLVAGWSRYIRSSMLDVINQNYIRTA 230 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +V+ HALRNA+ P+VT++G+ + AGA++ E IF+WPG+GR + A+ Sbjct: 231 RAKGVPERKVLYRHALRNALTPLVTLMGMDLPAFFAGAVIVEQIFAWPGMGRLFLSAVTN 290 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V+ G ++ A +++ NLL DL Y ++PR++++ Sbjct: 291 NDYQVMMGITMITAILVLAGNLLADLFYTRLDPRVKYE 328 >UniRef50_D2LLS4 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Euryarchaeota RepID=D2LLS4_9EURY Length = 335 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 148/338 (43%), Positives = 209/338 (61%), Gaps = 6/338 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 Q+I+RRL L+ P IG+TL+TF +IP DP AG++ P ++ E L+ P Sbjct: 4 WQYIVRRLLLLFPVIIGVTLITFTISFVIPADPARAWAGQKA-PPSVVEKIRIEYHLNDP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 ++ QY +YI GV G+ G S + PV + F AT EL + AM A GI +GV++ Sbjct: 63 IYVQYYYYITGVFTGNWGYSHSEKRPVAQCLANYFPATFELTLWAMAIAIPTGIYLGVVS 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AVKR I DH + AL+G SMPIFW G++LI+L + P SGR + + Sbjct: 123 AVKRNKIPDHLSRVFALSGVSMPIFWLGLLLILLFYTYLGWLPASGR-----GIPPRHIY 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG ++D+ + + F+ + H+ILP+I L LAVI RMTRSSMLEVL DYI+TA+ Sbjct: 178 TGLWILDSILSLDWHAFVVDLRHIILPSITLSYATLAVITRMTRSSMLEVLRLDYIKTAK 237 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ VI HALRNA++P +TV GL LL GA+LTETIF+WPG+GR+ A+ Sbjct: 238 AKGLSNKVVIYRHALRNALIPTLTVSGLAFAGLLGGAVLTETIFAWPGMGRYAYQAISTL 297 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYP + G LL+A + ++ NL+VD++Y ++PRI+ + Sbjct: 298 DYPAIMGVTLLMAIIFVIGNLIVDIMYAYLDPRIKLGE 335 >UniRef50_B9K0U0 ABC transporter membrane spanning protein (Dipeptide) n=1 Tax=Agrobacterium vitis S4 RepID=B9K0U0_AGRVS Length = 359 Score = 405 bits (1043), Expect = e-112, Method: Composition-based stats. Identities = 153/358 (42%), Positives = 213/358 (59%), Gaps = 23/358 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + +RL + IP GI ++TFA +IPGDP M GE+ + E A + G DK Sbjct: 1 MLGYAAKRLLISIPVIFGILIVTFALARLIPGDPCKAMLGEKA-TAETCAGFITRYGFDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GD G S++ PV + + R T EL V A+I AT +G+ +GV+ Sbjct: 60 PLPTQFFIYMGDMLRGDFGTSVRFSRPVTQIIIERLPMTAELAVLALITATVIGVGLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN----LTPVSGRVSDMVFLD 176 AA + S D + +A G SMP+FW G+ML L V P SGR+S V Sbjct: 120 AARRHNSAADVGTMIVANAGISMPVFWLGLMLAYLFGVMLRGTPFWLPPSGRLSAGVNSI 179 Query: 177 DSNPL------------------TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA 218 + + F +++ I G F DA+ HMILP + L TIP+A Sbjct: 180 PFYEVWHWQLAAESGWSKVLEFFSNFYILNALITGNWTVFWDAIRHMILPVMALSTIPMA 239 Query: 219 VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGA 278 VI RMTRSS+L+VLG DY+RTARAKG+ RV+ HAL NA+LPVVT++GLQ+G LL+GA Sbjct: 240 VIARMTRSSLLDVLGRDYVRTARAKGVPEKRVVSEHALGNALLPVVTILGLQMGALLSGA 299 Query: 279 ILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +LTET+F G+GR L++A+ RDYPVVQ +++A + +NLLVDL Y ++PRIR Sbjct: 300 VLTETVFGLSGVGRMLVEAIFARDYPVVQAFTVMIAVSYVAINLLVDLSYTYLDPRIR 357 >UniRef50_A8F3B0 Nickel-transporting ATPase n=7 Tax=Bacteria RepID=A8F3B0_THELT Length = 320 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 201/336 (59%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL IPT + L F + MIPGDP M++ G + PE A+ +LGLDK Sbjct: 1 MTKYIIKRLLQAIPTLFFVILTVFLIMKMIPGDPAMVLLGPQAG-PEDIARFRQQLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ Y+ ++ GDLG S+ R V R T+ L +CA+ A +GIP G+L Sbjct: 60 PVIVQFFLYLKRILTGDLGTSLVYRQDVLSLIFERLPTTIILSICALFIAIVIGIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K S D L+L G S+PIFW+GM+LI++ S+ P G Sbjct: 120 AAIKHNSFVDLLVTSLSLIGISIPIFWFGMVLIIIFSLQLGWLPAVGTGDFS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + D ++H ILP++ LG + I R TRSSMLEVL +DYIRTA Sbjct: 172 ---------------KSIWDGLSHFILPSLALGILSTGTIARFTRSSMLEVLNQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HALRNA++PV+TVIGLQ+G LLAGA+LTET+F+ PGLG+ ++D + R Sbjct: 217 YAKGLRRHLILYRHALRNALIPVITVIGLQLGNLLAGAVLTETVFALPGLGKLMVDGIFR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY +VQG VL A M I VNL VD+ Y +NP++R Sbjct: 277 RDYMLVQGEVLFTAMMYIFVNLAVDITYAFINPKVR 312 >UniRef50_A6TS96 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Clostridia RepID=A6TS96_ALKMQ Length = 321 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 190/338 (56%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL IP IG+++L FA + PG P+ + ++ E+ QL GL++ Sbjct: 1 MGKYILRRLFQQIPILIGVSILLFAIFQLAPGSPLASFYMDPSMTSEQMEQLEEAYGLNR 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ GV+ G+LG S + R PV R T + ++ + + IP+GV+ Sbjct: 61 PVHLQYVDYMRGVVVGNLGTSFQLRQPVSTLIGERMWTTFYISFVSLFISLMIAIPIGVI 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A K+ SIFD+ AL G S+PIF++ ++LI + P+SG + Sbjct: 121 SATKQYSIFDYAGTIFALMGVSIPIFFFALLLIKQFGIDLRWFPISGMRTPAAD------ 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + N D + H +LP VLG +R TRSSMLEV+ +DYIRTA Sbjct: 175 -----------FSFPHNMFDLLKHSVLPLTVLGLTQAGRFMRYTRSSMLEVIRQDYIRTA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVT++G + L +GA+L E +F WPG+GR +++ Sbjct: 224 RAKGLNEKVVIYKHALRNALIPVVTLLGASLPILFSGALLIEIVFVWPGMGRLQYNSVLH 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L + + ++ NL+ D+ Y ++PRIR+ Sbjct: 284 RDYPLMMGINLFLGVLTLMGNLVADISYAFIDPRIRYD 321 >UniRef50_B7GIJ6 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=17 Tax=Bacteria RepID=B7GIJ6_ANOFW Length = 354 Score = 398 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 154/337 (45%), Positives = 231/337 (68%), Gaps = 4/337 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + ++RL VIP +G++L+ F + IPG+P ++ G++ + E L +LGLD+ Sbjct: 21 MFSYTVKRLLTVIPVLLGMSLVVFFMIRAIPGNPAQVILGQKA-TKEAVEALTHKLGLDQ 79 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY+ Y+ G++ GDLG S+++ + V +E P ATLEL + AM A +G+ G++ Sbjct: 80 PWYVQYIKYLGGLLKGDLGESLRTGVAVSQEIWPYLAATLELSLAAMFIAVVIGVNAGII 139 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A + S FD+ A+ LAL G SMPIFW G+M + +++ + P SGR + P Sbjct: 140 SAWFQNSWFDYVAMVLALVGVSMPIFWLGLMEQWIFAINLDWFPTSGREDVR---NPIEP 196 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T +IDT + G F+ + H++LP++ L TIP+A+I RMTRSSMLEV+ DYIRTA Sbjct: 197 ITHLYVIDTLMQGHTDQFVQTLQHLVLPSVALATIPMAIIARMTRSSMLEVMKSDYIRTA 256 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ H+L+NA++PV+TVIGLQ+G LL GAILTETIFSWPG+GR++ +A+ Sbjct: 257 RAKGLSMFWVVYKHSLKNAIIPVLTVIGLQMGLLLGGAILTETIFSWPGIGRYIYEAIGY 316 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+Q G+L+VA + I +NL+VDLLY ++PRI++ Sbjct: 317 RDYPVIQSGILIVAMIFIFINLIVDLLYAAIDPRIKY 353 >UniRef50_C1VC58 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VC58_9EURY Length = 313 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 136/338 (40%), Positives = 216/338 (63%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++ RRL + IP IG+T++ + +++ PG+P I G P A+L ++GL++ Sbjct: 1 MLKYVTRRLLITIPVLIGVTIVISSIIYIAPGNPARIALGANAR-PAAVAELERQMGLNQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P W +YL ++WGV+HG+LG S++++ V + R ATLEL + +M+ + +P+GV+ Sbjct: 60 PPWIRYLEWLWGVLHGNLGESIRTQRSVIQMIANRLPATLELALSSMVLTFIIALPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ ++ A+ SMP FW ++LI+L SV W+L P+SGR + + Sbjct: 120 SAVKQYTWADNLSMLFAIFWISMPSFWLALILILLFSVQWSLFPISGRATPVFTTA---- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPA+ GT ++ R+TRSSMLEVL EDYIRTA Sbjct: 176 --------------------WLVSLILPAVATGTRRAGLLTRITRSSMLEVLNEDYIRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R KG+ VI HA++NAM+PV+T+IGLQ+ + G+++ ET+FSWPG+GR L++++ + Sbjct: 216 RGKGIGEKSVIYTHAMKNAMIPVITLIGLQIPAIFGGSVIIETVFSWPGMGRLLVNSVLQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL+ A +++ NLLVD+ YG +PRI ++ Sbjct: 276 RDYPVVQGLVLVYAIIVVASNLLVDVAYGYFDPRIEYE 313 >UniRef50_D1Y6N0 Oligopeptide transport system permease protein AppB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6N0_9BACT Length = 320 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 135/341 (39%), Positives = 195/341 (57%), Gaps = 24/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG--ERGISPERHAQLLAELGL 58 M +I+RR+ +PT + +LL F+ +++ PGDPV ++ G + +S E+ + + GL Sbjct: 1 MWAYIIRRIFQTVPTLLISSLLIFSLLYVTPGDPVELILGTEDANVSEEQRKLVEEQWGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 DKP +Y+ +I G GDLG S + V+ R TL+L AM+ A V +P+G Sbjct: 61 DKPFLVRYIRFIKGAFVGDLGTSYATGEDVFSSVAKRMPNTLKLAGSAMVIALVVSLPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAA+K I D A LA G S+P FW+G++LI+ ++H P Sbjct: 121 ILAALKHNGILDSVATALATIGVSLPRFWFGLVLIIFFALHLGWLPTM------------ 168 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + +ILPA L A RM RSSML+VL +DY+R Sbjct: 169 ----------PETTNIADGVVPFLRSIILPASSLALSMAATQTRMIRSSMLDVLNQDYVR 218 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR+KGL VI HAL+NAM+PVVTVIG ++G+LL GA++TE+IFSWPG+GR I ++ Sbjct: 219 YARSKGLKEHAVIWGHALKNAMIPVVTVIGGEIGSLLGGAVITESIFSWPGVGRLTISSI 278 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RRDYP++QG L++ +LVNL+VD+LY NPRIR Sbjct: 279 ARRDYPMIQGATLMLCISYMLVNLVVDILYAWFNPRIRLDS 319 >UniRef50_D1Y1A5 Probable D,D-dipeptide transport system permease protein DdpB n=2 Tax=Bacteria RepID=D1Y1A5_9BACT Length = 309 Score = 395 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 140/337 (41%), Positives = 201/337 (59%), Gaps = 33/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ +RRL L++P G+ LL F +++ PGDP + GE E Q GLD Sbjct: 1 MLKYTIRRLILLVPVLAGVALLVFTLLYITPGDPARMALGEDA-PQEAVEQFRKNYGLDD 59 Query: 61 PMWQQYLHYI-WGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + Q+ Y ++HGD+G S ++ V EE + RF TL+L A++ A+G+P G+ Sbjct: 60 PFFVQFGRYCYKALLHGDIGDSYVTKSSVSEEILTRFPTTLKLAFWAVVLGVALGLPFGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A+++ SIFD ++ LAL G +MP FW G++LI+L SV N P SG + Sbjct: 120 ICAIRQYSIFDSVSMVLALIGVAMPNFWLGVLLILLFSVKLNWLPPSGFTTFAE------ 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 M +P L LAVI RMTRSSMLEV+ DY+RT Sbjct: 174 -------------------------MAMPVFTLSGGTLAVITRMTRSSMLEVIKSDYVRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG +I HAL NA++P++T++G+Q G LL+GAILTET+FS PG+GR ++++++ Sbjct: 209 ARAKGQRESVIIWRHALPNALIPILTIVGMQFGGLLSGAILTETVFSIPGVGRLMVESIK 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+PVVQGGVL +A + +NL VDLLY V+PRI+ Sbjct: 269 MRDFPVVQGGVLYIALVFCFINLAVDLLYAWVDPRIK 305 >UniRef50_B9L1W1 Dipeptide transport system permease protein dppB n=3 Tax=Bacteria RepID=B9L1W1_THERP Length = 338 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 155/337 (45%), Positives = 226/337 (67%), Gaps = 3/337 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDKP 61 +F+LRRL + +P +G+TL+TFA H+IP DP+M + ER P+ GLD+ Sbjct: 4 RFVLRRLLVTMPLLVGVTLVTFAVSHLIPADPLMAILPERAANDPQTVQMYRERWGLDRS 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QYL Y+ ++ GDLG S SR PV ++ RF AT+EL + AM++A +G+ +GVL+ Sbjct: 64 LPEQYLFYLRNLLRGDLGESYTSRRPVMQDLRERFPATVELALAAMLYAVTLGLTLGVLS 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ DH A +AL G S+P+FW G++ + L + L P GR+ + Sbjct: 124 AIWYERWIDHVARLVALVGVSLPVFWLGLLALQLFYANLRLLPGPGRIDPRLTAPPFR-- 181 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TGF ID+ + G+ F++ ++H++LP +VLG+ + +I RMTRS++L+VLG DYIRTAR Sbjct: 182 TGFYTIDSLLAGDWSLFLNVLSHLVLPGMVLGSYAMGIIARMTRSALLDVLGADYIRTAR 241 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL RVI+VHALRNA++P VTVIGL G+LLAGA+LTETIF+WPG+GR+ +DA + Sbjct: 242 AKGLAERRVILVHALRNALIPTVTVIGLTFGSLLAGAVLTETIFAWPGIGRYAVDAAMKL 301 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P V G LL+A + ++VN L D+LYG+++PRIR Sbjct: 302 DLPAVLGVTLLIAVVYVVVNFLTDVLYGMLDPRIRVS 338 >UniRef50_C8WR99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WR99_ALIAD Length = 320 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 188/339 (55%), Gaps = 21/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RR+ IP+ IGI+++TF +H++PG+PV I+ G+ +P+R A L LGL+K Sbjct: 1 MLSYIVRRILQAIPSLIGISIITFILLHIVPGNPVRILLGQH-YTPQRAAALAQSLGLNK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL ++W ++HG+LG S PV TL L + A IFA + +G + Sbjct: 60 PLYMQYLIWLWNILHGNLGYSYNYTEPVTYLIGHALPNTLSLVLIATIFAQLFAMLIGTV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +I DH L YSMP FW G++++M S+ + P G V+ Sbjct: 120 QAYFENTIADHIITVLNYFFYSMPSFWLGILMVMFFSIQLHWFPSGGVVNPQDPNP---- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ILPA L + LA R RSS+ E L DY+RTA Sbjct: 176 ----------------GFWDWLHHLILPAATLTLVTLAGYSRYMRSSVRETLLMDYVRTA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +V+ H LRN++LP +T+ GL L AGA+ E IF++PG+G +A+ Sbjct: 220 RAKGLRESQVLWRHVLRNSILPQITLFGLSFPALFAGALFIEEIFNYPGMGLLYWNAVGT 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYPV+ G + + + I+ NLL D+LY +V+PRI + Sbjct: 280 LDYPVLLGVTMFLGALTIIGNLLADILYSLVDPRISLES 318 >UniRef50_Q0T6D1 Glutathione transport system permease protein gsiC n=145 Tax=Bacteria RepID=GSIC_SHIF8 Length = 306 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++++RL +IPT +++L F FVHM+PGDP ++AG + + +LGLD+ Sbjct: 1 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEA-DAQVIELVRQQLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ HYI + GD G+SM SR PV +E RF TL L + +M++A G+ G++ Sbjct: 60 PLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D ++ +A++G S P F GM LI + SV P G Sbjct: 120 AAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D+ H ILP++ LG AV+ R TR+S ++VL EDY+RTA Sbjct: 167 ------------------ADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ V++ H LRNAM+PVVT++GLQ G LL G+I+ E +F+WPGLGR L+D+++ Sbjct: 209 RAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEM 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +LL + IL+NL+VD+LY +NP IR+K Sbjct: 269 RDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306 >UniRef50_A8FB89 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein n=5 Tax=Bacteria RepID=A8FB89_BACP2 Length = 348 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 228/336 (67%), Gaps = 4/336 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + ++R G++IP IG+TL+ F+ + IPG+P ++ G+R + E QL +LGL++P Sbjct: 17 FAYCMKRAGMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRA-TKEAVEQLTIQLGLNQP 75 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY HY+ G++ GDLG S+++ + +E P ATLEL AM+ A VG+ G+++ Sbjct: 76 WYVQYGHYMLGLLKGDLGTSIRTGAAIAQEMKPYLFATLELTFFAMVLAIVVGVNAGIIS 135 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + S FD+ A+ +AL G SMPIFW G+M L S+ W + P +GR + + + Sbjct: 136 AWFKHSFFDYVAMFIALIGVSMPIFWLGLMGQWLFSIEWGILPTTGRENVR---NPVESI 192 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 T +DT + G F D++ H+ILP+ L TIP A+I R+TR+SMLEVL D+IRTA+ Sbjct: 193 TYIHTLDTLLQGRFDQFTDSIKHLILPSTALATIPAAIIARITRASMLEVLHSDFIRTAK 252 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+ +I H L+NA++P++T+IGLQ G LL GAILTETIF+WPG+GR++ DA+ R Sbjct: 253 AKGVRSFFIIYQHGLKNALIPILTIIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYR 312 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+Q G+L+VA + +L+N +VD+LY V++PRI++ Sbjct: 313 DYPVIQTGILVVALIFVLINFIVDILYAVIDPRIKY 348 >UniRef50_A6TS90 Nickel-transporting ATPase n=4 Tax=Bacteria RepID=A6TS90_ALKMQ Length = 309 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 151/337 (44%), Positives = 209/337 (62%), Gaps = 33/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ILRRL +IP +G++L+ F ++ PGDP IM GE E A++ LGLD Sbjct: 1 MHKYILRRLLYLIPVILGVSLIVFTMMYFTPGDPARIMLGESAPDEE-VARMRESLGLDD 59 Query: 61 PMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P Q+ Y+ V+H D+G S ++ PV EE + RF ATL+L + A +GIP+G+ Sbjct: 60 PYVVQFGRYVKNAVVHQDIGRSYRTGRPVAEEVLTRFPATLKLAAAGVFVAVVIGIPIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A K+ S+FD+ A+ AL G SMP FW GMM I++ SV+ P SG + Sbjct: 120 ISATKQYSLFDNVAMIFALMGVSMPNFWQGMMGILIFSVYLGWFPSSGFST--------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H+ILPA +GT A+I RMTRSSMLEV+ +DYIRT Sbjct: 171 ----------------------FRHLILPATTIGTSSAAIITRMTRSSMLEVVRQDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG VI HAL+NA++P++TVIGLQ G LL GA+LTE+IFS PG+G+ ++D++ Sbjct: 209 ARAKGQAESVVINQHALKNALIPIITVIGLQFGYLLGGAVLTESIFSIPGVGKLMVDSIL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD+PVVQGGVL +A +VNL+VD+LY V+PRI+ Sbjct: 269 TRDFPVVQGGVLFIAVTFSMVNLVVDILYAYVDPRIK 305 >UniRef50_Q28JR5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=Q28JR5_JANSC Length = 324 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 133/337 (39%), Positives = 203/337 (60%), Gaps = 13/337 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F++RRL I IG+TL++F + I GDP + E + E LG D+ Sbjct: 1 MWTFLVRRLLQSIIVMIGVTLISFISLQ-IGGDPTYLFVSENATTEE-IEAARIALGFDR 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL YIWG + GD G S+ R P + + AT+EL +++ A + +P+G+ Sbjct: 59 PLHIQYLSYIWGALQGDFGNSLSYRQPAMDIVLQAMPATIELTFFSLVIAIGLSVPLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ RG D + +A+ G S+P FW G+M+ + ++ P+SG + L + Sbjct: 119 AALHRGKPIDGGIMTIAMLGQSIPNFWMGIMMFLFFGLYLGWFPISGNEPFLEPLFEGEF 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F + + + HM+LPA+ +GT LA R+ RSSMLEVL +DY+RTA Sbjct: 179 SEAFTNLPST-----------IHHMVLPAVAVGTYTLARNARLVRSSMLEVLQQDYVRTA 227 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ RV+I HA+RNA LPVVT+IGL+ G LL G ++ ET+FS+PG+GR + +A+ + Sbjct: 228 RSKGISERRVVINHAMRNAWLPVVTMIGLEFGFLLGGVVVVETVFSYPGIGRLVFNAINQ 287 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RD PVVQ V+L+A + IL+NL+VDL+Y ++PR++ Sbjct: 288 RDIPVVQASVILLAAIFILLNLIVDLIYARLDPRVKL 324 >UniRef50_A0LI52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI52_SYNFM Length = 332 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 187/346 (54%), Gaps = 22/346 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI--------MAGERGISPERHAQL 52 M +IL+RL +IPT +GIT +TF + + PG+P + G+RGISPE Q Sbjct: 1 MKGYILKRLLQIIPTLLGITFITFLIIQLAPGNPATLKLQMSGQGQLGDRGISPEVIEQT 60 Query: 53 LAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 GLDKP+ +QYL ++ V D G S K VWE+ R TL+L + ++ Sbjct: 61 KKLYGLDKPLHEQYLLWVKRVFTLDFGTSYKDHRNVWEKIAERLPVTLQLNLISIFLVYL 120 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM 172 + IP GV +AV+ GS +DH YS+P FW ++LIM + Sbjct: 121 IAIPFGVYSAVRPGSFWDHALTLFFFFLYSLPSFWVAVLLIMFLG--------------G 166 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 D P I +D V H++LP L LA + R+TR++MLEV+ Sbjct: 167 GDFWDIFPAYNISSIGAEALSPLQWLLDRVWHLVLPVTCLTYGGLAYLSRLTRANMLEVI 226 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 EDY+RTARAKGL+ VI HA RNA+LP++T++ + ++ G+++ E+IFS PG+G+ Sbjct: 227 REDYVRTARAKGLSERVVIFKHAFRNALLPIITLLAFLLPSMFGGSVIIESIFSIPGMGQ 286 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +A+ RDYPV+ + A + ++ L+ DLLY ++PRI+ + Sbjct: 287 LGFEAVLGRDYPVIMAITTVSAMLTLIGLLISDLLYAAMDPRIKLE 332 >UniRef50_D1CAI4 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=D1CAI4_SPHTD Length = 308 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 140/339 (41%), Positives = 205/339 (60%), Gaps = 32/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML++I RL IP G+TL F V ++PGDPV IM G + +PE+ A + +LGLD Sbjct: 1 MLRYIAVRLISAIPVVFGVTLAVFFMVRLVPGDPVDIMFGNQARPTPEQRAAMRKQLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QY+ +I + GDLG S +S+ PV +E + R TL+L ++ A +G GV Sbjct: 61 LPIHKQYVKFISDALRGDLGRSFRSKRPVMQEILIRLPNTLKLTAASLAVAVVIGTVTGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA +GS D+ ++ A+ G S+P FW G+MLI+L SV PVSG + Sbjct: 121 LAATFKGSWIDNVSMVSAVLGVSIPGFWLGLMLILLFSVRLGWLPVSGTGT--------- 171 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H++LPA LG + A++ R+TR+SMLE L DY+RT Sbjct: 172 ----------------------WKHLVLPAFTLGLLSSAILARLTRASMLEALSGDYVRT 209 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V+I HALRNA++P+VT++GLQ+G LL+GA + E +F + G+G + ALQ Sbjct: 210 ARAKGLREWWVVIRHALRNALIPIVTMLGLQIGGLLSGAFIIEAVFGYSGIGLLAVGALQ 269 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++QG VL+V+ + + VNLLVD++Y ++PRI + Sbjct: 270 TRDFPLIQGIVLMVSLIYVGVNLLVDIIYAAIDPRISYS 308 >UniRef50_B0PCD1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCD1_9FIRM Length = 306 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 136/338 (40%), Positives = 208/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + ++R+ VIP + I+ + F + ++PGDPV M G S E A AELGLDK Sbjct: 1 MLGYTIKRILQVIPVLLIISFICFMMIRLVPGDPVANMLGVNA-SKEAIAAQRAELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S+ +R PV +E R+ ATL+L + A +FA VGI GVL Sbjct: 60 PLLTQYGDFLVKALQGDLGKSITTRRPVIDEIAQRYPATLKLALGATVFAAVVGITFGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D+ + +L S P F+ +++++L S+H P G + + Sbjct: 120 SAVKQNKLTDNVIMVFSLLSVSTPSFFLALVMMLLFSIHLGWLPSMGLRTPL-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H +LP I LG + +I R TRSSMLEVL +DYIRT+ Sbjct: 172 -----------------------HYVLPIITLGMQSVGLIARTTRSSMLEVLRQDYIRTS 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+++ +++ HA +NA++PVVTV+GL+ G LLAG++L E +FS PG+GR+++D + + Sbjct: 209 RSRGISQAVIVMRHAFKNALIPVVTVVGLRFGGLLAGSMLVEAVFSVPGIGRFMVDGVLK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL++AT +LVNL VDL+Y +++PRI++ Sbjct: 269 RDYPVVQGTVLVLATTFVLVNLAVDLIYALIDPRIKYD 306 >UniRef50_B9KZQ4 Dipeptide ABC transporter permease n=4 Tax=Bacteria RepID=B9KZQ4_THERP Length = 315 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 136/339 (40%), Positives = 202/339 (59%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L IP + + TF +HM PGDPV ++ G + E+ A+L ELGL+ Sbjct: 1 MTAYIVRRLLLAIPVMLLVATATFLLLHMTPGDPVAVLLGPDATT-EQIAELRRELGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY ++ G + GDLG S+ PV R T +L + A + A +G+ +G+L Sbjct: 60 PIYIQYGRWLAGAVRGDLGQSIFLNKPVTIAIFERLAPTAQLSILASLVAIVIGLSLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+ G+ D A+ +A+ G SMP FW G+ LI + +V + L P G Sbjct: 120 SAVRHGTALDLGAMLIAMIGISMPTFWLGLNLIFIFAVSFRLLPPQGYQPLH-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D ++ MILPAI LG A + R+TRS +LE L EDY+RTA Sbjct: 172 ---------------EGLWDNLSRMILPAITLGAGQGAFLARITRSVVLETLREDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ RV++ H LRN ++P+ TVIGL L+ GA++TE +F+ PG+GR LI A+ R Sbjct: 217 RAKGLSERRVLVGHVLRNGLIPITTVIGLTFAILMGGAVVTEQVFNIPGIGRLLIQAVLR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD+P++QG VL +A + +L+NLL+D+LY ++PRIR+ + Sbjct: 277 RDFPLIQGIVLFIAFVYVLINLLIDILYAFLDPRIRYAE 315 >UniRef50_A6TPC4 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Bacteria RepID=A6TPC4_ALKMQ Length = 315 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 204/344 (59%), Gaps = 37/344 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++ LRRL ++P IG+T + F+ ++ PGD + G+ + E+ + ++GL+ Sbjct: 1 MVKYTLRRLAYLLPVLIGVTFVVFSIMYFTPGDAAAMRLGQEA-TQEQIDSMRDQMGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY YI + GD G S +S PV E + RF T L V M A +G+ +GV+ Sbjct: 60 PFHIQYGRYIINAVQGDFGRSWRSNSPVISEILARFPNTFVLSVAGMSIAILIGVSLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN------LTPVSGRVSDMVF 174 +AVK+ SI D+ + AL G S+P FW+GM+ I+L SV WN L P SG Sbjct: 120 SAVKQYSISDNIGMFFALFGVSVPNFWFGMLTILLFSVFWNNQFGFSLFPSSG------- 172 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 F + ++LPA+ LGT A+I RMTRS+MLEVL + Sbjct: 173 -----------------------FDAGLRSLVLPALTLGTSSAAIITRMTRSAMLEVLSQ 209 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYIR RAKGL ++I HAL NA++P++TV GLQ G LL GA+ TET+FS+PG+GR + Sbjct: 210 DYIRFTRAKGLGERKIITRHALSNALIPIITVTGLQFGVLLGGAVFTETVFSFPGIGRLI 269 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +++++ RD P+VQG V+ +A + LVNL VDL+Y +V+PRI+ + Sbjct: 270 VESIRARDLPMVQGSVIFLAFVFSLVNLGVDLIYALVDPRIKAQ 313 >UniRef50_C0ZDH7 ABC transporter permease protein n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDH7_BREBN Length = 312 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 131/335 (39%), Positives = 199/335 (59%), Gaps = 32/335 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q+ L R+ + +GI++ +FA VH IPGDPV IM GE+ + + QL ++GL++ Sbjct: 1 MKQYFLNRMLSGVIVLLGISIFSFALVHFIPGDPVRIMLGEKA-TKAQVEQLREQMGLNQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL Y+ V+ GD G S+++ PV E + RF AT++L + A +G+ +G++ Sbjct: 60 PLPHQYLTYMEKVIQGDFGNSLQTERPVIVEIMERFPATVKLAFAGIGIAVVIGLTMGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + + D + A G S+P FW G+++IM SV P++G Sbjct: 120 AAKYKNTFLDFMLMAAASIGLSLPSFWLGLLVIMFFSVQLGWFPIAG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++LPA LG + A+I R+TRS M+EVL DYIRTA Sbjct: 167 ------------------GTGWKDLVLPACTLGVLSSAMISRLTRSGMVEVLSHDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL ++ HAL N M+PVVTV+GLQ+ TLL GA++ E +F+WPG+G I A+ Sbjct: 209 RAKGLRESIILFRHALCNVMIPVVTVVGLQIATLLGGAVIIEQVFNWPGIGTLAIRAISA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD+P++QG VLL+ + ++VN++VDLLYG+++PR+ Sbjct: 269 RDFPMIQGIVLLMGFVYVVVNMMVDLLYGLIDPRV 303 >UniRef50_Q9V2D1 Binding protein-dependent transport system, inner membrane component n=1 Tax=Pyrococcus abyssi RepID=Q9V2D1_PYRAB Length = 310 Score = 388 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 124/333 (37%), Positives = 199/333 (59%), Gaps = 32/333 (9%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I++++ ++ +++ +F+ +H+IPGDP + GE + E+ A+ +LGLD+P++ Sbjct: 5 WIIKKILSLLIPIFIVSVFSFSILHLIPGDPARYLLGEFA-TEEQLAKFRHQLGLDRPLY 63 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY+ ++ V+ GD G S+ +PV E R TL+L V A I A G+ G+LAAV Sbjct: 64 IQYIDWMSKVLRGDFGTSLVQGVPVSELIAGRLSYTLKLTVTAWIIAWVFGLVFGMLAAV 123 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + ++FD+ + LA+ SMP FW G++LI++ V + P+SG Sbjct: 124 YKHTLFDYIVMTLAVFFMSMPYFWLGILLILIFGVKLGILPISGPGD------------- 170 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 H+ILP++ LG +AVI R+TR++ML+VL +DYI TARAK Sbjct: 171 ------------------WRHLILPSLTLGLPQVAVIARLTRANMLDVLEKDYIMTARAK 212 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL V+ HALRNA++P+VT + LQ+ L GA++TET+F WPG+G L+ A+ +RDY Sbjct: 213 GLPERMVVYKHALRNALIPLVTYMFLQIPWLFGGAVVTETVFGWPGMGNLLVMAIFQRDY 272 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 PVVQ VL++ + ++ N L D+ Y +++PR+R Sbjct: 273 PVVQAIVLIIGVLTVIANFLADITYTIIDPRVR 305 >UniRef50_Q67T79 Oligopeptide ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67T79_SYMTH Length = 306 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 135/336 (40%), Positives = 202/336 (60%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +I+RRL IP +G++L+TF +H++PGDPV + E+ P ++ E+GLD+ Sbjct: 1 MLAYIVRRLWSGIPVLLGVSLITFILMHVVPGDPVTVAF-EKKADPATIERIRREMGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + GDLG S +++ PV ATL+L A++ + +G+P+G+L Sbjct: 60 PLPVQYADFLLRALRGDLGRSFQTQQPVMNMIRSAMPATLKLTASAVLVSVVIGVPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ RG+ D+ A AL+ S P+FW M+ +L P+SG Sbjct: 120 SALNRGTAIDYMATVTALSFISAPVFWVAMVAQLLFGYRLGWLPISGF------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+ILPA+VLGT A I R TRSSML+V+ +DYIRTA Sbjct: 168 -------------------DTLKHLILPALVLGTRYAASIARYTRSSMLDVVSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V+ HAL+NA++PV+TV+GL++G LL G+ILTE++F PGLG I L Sbjct: 209 RAKGLSGRVVVFKHALKNALIPVITVVGLEIGGLLTGSILTESVFGIPGLGLVTIRGLNA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+PV+Q VLL A + +++N+LVD+ Y +V+PRIR Sbjct: 269 LDFPVIQATVLLTAVIFVVMNILVDISYSLVDPRIR 304 >UniRef50_B8E2R5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Dictyoglomus RepID=B8E2R5_DICTD Length = 309 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 147/338 (43%), Positives = 214/338 (63%), Gaps = 29/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I+RRL IP FIG+TL+TF + PGDP ++AG+R E A++ A GLDK Sbjct: 1 MLRYIIRRLLQAIPVFIGVTLITFILFFIAPGDPARLIAGQRA-DAETIARVRAMWGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ ++ D G S K+ IPV R QAT L A I A +G+ G++ Sbjct: 60 PLPVQYLLFLGRIVRLDFGRSFKTNIPVIVSIGERLQATAVLAFFAFIIAVFLGVTAGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ S+FD+TA+ +AL G S P++W G++L+++ + P+ G +S+ Sbjct: 120 SAVRQYSLFDYTAMVVALLGVSAPVYWVGIILLLIFGFNLGWLPLGGYISEY-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPAI LGT P A R++RSSMLEV+ ++YI TA Sbjct: 172 --------------------GIKAVILPAITLGTRPAAYFARLSRSSMLEVIRQEYITTA 211 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +VI HALRNA++PVVT G+ VG LL GA+LTETIF+WPG+GR ++ A+ Sbjct: 212 RAKGLPESKVIFKHALRNALIPVVTYAGMVVGDLLTGAVLTETIFAWPGIGRLVVQAILD 271 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QGGV+++A + IL NL+VDL Y +++PRIR++ Sbjct: 272 RDLPVLQGGVIVIALIYILANLIVDLSYALIDPRIRYE 309 >UniRef50_B1L5E7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=4 Tax=cellular organisms RepID=B1L5E7_KORCO Length = 337 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 147/336 (43%), Positives = 216/336 (64%), Gaps = 3/336 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RRL L+I GI ++TF H+IP DP+ + G + SPE ++ E G DKP+ Sbjct: 5 TYIIRRLALMIFVLFGIIVITFVVSHVIPADPIGAILGPQA-SPELVEKIRREWGFDKPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 +Q+ YI+ V+ GDLG S+K+ PV E+ + F AT+EL A+I A A+GIP+G+++A Sbjct: 64 HEQFFDYIYKVVRGDLGRSIKTNKPVMEDLLYFFPATIELATAAIIVAIAIGIPLGIISA 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 VK+ DH + AL G SMP+FW G++L+ ++ + P GR+ + + +T Sbjct: 124 VKKDKWPDHISRIFALMGVSMPVFWLGLILLFVLYYKLGIFPGPGRLDPGI--PEPPRIT 181 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G + ID+ I G FI+A+ H+ LP+ VLG A I R+TR+++LEVL +D+I+ AR+ Sbjct: 182 GLLTIDSLITGNFEAFINALWHLALPSFVLGYYASASIARITRTALLEVLTQDFIKAARS 241 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL V+ HALRNA++P TVIG+ G+LL GAILTETIF+WPGLGR+ A D Sbjct: 242 KGLAERIVLFRHALRNALIPTTTVIGMAYGSLLEGAILTETIFAWPGLGRYSTGAFLSVD 301 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + V G LL+A + L NL+VD+LY ++PRIR+ Sbjct: 302 FMAVMGSTLLIAIVYSLANLIVDILYAFLDPRIRYA 337 >UniRef50_A4IPU6 ABC transporter (Permease) n=5 Tax=Bacteria RepID=A4IPU6_GEOTN Length = 316 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 203/339 (59%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+ R+ +IP + + ++ F +H+ PGDP +M G + +PE QL +LGL+ Sbjct: 1 MKAYIVTRILSLIPVLLVVAIVAFFLIHLTPGDPAAVMLGSQA-TPEEVEQLREQLGLNL 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++Q+ ++ +G++ GD G S+ PV F+ TL L V A + + IP+G+ Sbjct: 60 PLYEQFANWFFGLLQGDFGWSIYYNKPVLTVFLEHLGPTLSLAVLAQAISMVLAIPMGIS 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG+ D + L + G ++P F G+ L+ L ++ L PV+G Sbjct: 120 AARKRGTKIDQIFMALVMLGMAIPSFLMGLFLMQLFALKLKLFPVAGYEPLS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + MILPA LG I A+I RMTRSSML+VL ++I+TA Sbjct: 172 ---------------SGLWNHLKFMILPATALGIIQTAIIARMTRSSMLDVLSANFIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG+ ++ HALRNA +P++TV+G + GTL+AGA++TET+F+ PG+G+ +I A+++ Sbjct: 217 YAKGVKEKVIVYKHALRNAAIPILTVLGQEFGTLIAGAVVTETVFNLPGIGQLVIHAIEK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+QG +LL A +LVNL+VDLLYG+V+PR+R + Sbjct: 277 RDYAVIQGTILLAALSYLLVNLIVDLLYGIVDPRVRFGR 315 >UniRef50_D1B7J8 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=D1B7J8_THEAS Length = 308 Score = 386 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 216/338 (63%), Gaps = 30/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q++LR+L + IP G+ + F + ++PGDP IM G+RG PE A++ A+LGLDK Sbjct: 1 MFQYVLRKLLVSIPVVWGVVTVIFILMAVVPGDPARIMMGQRG-DPETLARIRADLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GDLG S ++ PV + RF T+ L + ++ AT VG+ G++ Sbjct: 60 PLTVQYVDFLSKLVRGDLGKSYRTNEPVSKAIGERFGVTMRLAIWCIVLATIVGVAAGIM 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ SIFD++A+ +A+ G S P+FW+ ++L+++ + + P G Sbjct: 120 SAVKQYSIFDYSAMFIAIAGVSAPVFWFSLLLLLVFAYGLHWVPGVGYEDGS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +M+LP I LG P A+I R+TRS MLEVL DYIRTA Sbjct: 172 ---------------------FRYMVLPIIALGLRPAAIIARLTRSCMLEVLSMDYIRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V++ HAL+NAM+PVVT++G ++ LL+GA+LTET+F+ PG+GR ++AL Sbjct: 211 RAKGLSERAVVLKHALKNAMIPVVTIVGAEMSGLLSGAVLTETVFALPGVGRLAVEALVA 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P+++G V+++A + ++ NLLVDL YG+ +PRIR++ Sbjct: 271 RDFPMIRGTVIVIALIFLVANLLVDLSYGLFDPRIRYE 308 >UniRef50_C0ZCW7 ABC transporter permease protein n=2 Tax=Bacteria RepID=C0ZCW7_BREBN Length = 311 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 133/338 (39%), Positives = 193/338 (57%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F++RRL + + ITL+ F V M GDPV IM + E +L LGLD+ Sbjct: 1 MAAFLIRRLLHSVFVVLAITLVIFVLVRMT-GDPVSIMFQAGEPTKEAITELRKNLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + G+ G S ++ V + + ATL L M A + IPVG++ Sbjct: 60 PVYVQFGLYLKDMFTGNFGTSFRTGESVIDMMNEKMGATLLLAFGGMFVALLIAIPVGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV RGS+ D +L G S P FW G+MLI++ +V P SG Sbjct: 120 SAVYRGSVADFFGRIFSLLGISFPNFWLGIMLIIIFAVKLGWFPASGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + +++LP++ LG I ++ R+ RSSMLEV+ + YI TA Sbjct: 168 -------------------EGLEYLVLPSVALGLILSGILARLVRSSMLEVMNQQYINTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG+ VII H LRNA++P VT IGLQ GTLL G ++ E +FSWPG+GR LIDA+ + Sbjct: 209 RSKGIKEWLVIIKHGLRNALIPTVTFIGLQFGTLLGGTVIIEQVFSWPGIGRMLIDAISQ 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PV+QG V++++ ++I VNLLVDL YG ++PRIR Sbjct: 269 RDFPVIQGSVIILSFLMIFVNLLVDLSYGFIDPRIRQG 306 >UniRef50_A8F6T0 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=A8F6T0_THELT Length = 328 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 127/343 (37%), Positives = 192/343 (55%), Gaps = 22/343 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI----SPERHAQLLAEL 56 M +++ RL +IP F I+L+ F ++ +PGDP++ E P + A+L Sbjct: 1 MKRYLFFRLLELIPIFFLISLIIFVILNAMPGDPLLTSRLENPRALVRDPAKIAELRKYY 60 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 LD P+ +Y ++ + GDLG S + PV V R TL L + A + V P Sbjct: 61 HLDDPLIVRYGFWLTSFLKGDLGFSSMYKQPVLGIIVKRLPNTLTLTITAWVIGLIVAFP 120 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G+ +AVK+ S FD+ LA G S+P FW+ +M I++ SV P+SG + Sbjct: 121 IGIYSAVKKYSFFDYFFTILAFVGISLPTFWFALMAIIVFSVVLGWFPISGVQTYG---- 176 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 I G F+D + H+ LPA+VLG + +A VR R+S+LEVL +DY Sbjct: 177 --------------ITGSWNIFVDKLRHLTLPALVLGLVQVAYWVRYIRTSLLEVLDQDY 222 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTA +KG RVI+ HALRNAM+P++T+I L + GA++ ET+FSWPG+GR + + Sbjct: 223 IRTAYSKGAKEKRVILKHALRNAMIPIITIIALDIPYFFGGALIVETVFSWPGMGRLMYE 282 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 A+ DY + ++ +A + +L NLL D+LY VV+PRIR + Sbjct: 283 AILASDYNLAVNCLMFIAVITLLSNLLADILYAVVDPRIRLGE 325 >UniRef50_D1C9Y6 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9Y6_SPHTD Length = 314 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 139/338 (41%), Positives = 202/338 (59%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I+RRL L IP + + + TF +HM PGDPV ++ G + E+ ++ LGL+ Sbjct: 1 MTRYIIRRLLLAIPVMLLVAVTTFLLLHMTPGDPVSVLLGPDA-TVEQIEEMREALGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q L++ + GDLG S+ PV E R Q TL L + A + A VG+P GV+ Sbjct: 60 PVHIQLLNWFRDLARGDLGESIFLGKPVTEAIAERAQPTLLLTLLASLVAICVGLPFGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV+RGS D A+ A+ G SMP FW G+ LI + V PV G Sbjct: 120 SAVRRGSTIDVGAMLAAMVGISMPTFWLGLNLIFIFGVKLRWLPVQGYQPLS-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ ++I+PA+ LG A++ RMTRS MLEVL EDY+RTA Sbjct: 172 ---------------EGLWTSLRYLIMPALTLGAAQGALLARMTRSMMLEVLHEDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ RVI+ HALRNA +P+VTVIGL L++GA++TE +F PG G+ LI A+ R Sbjct: 217 RAKGVSERRVILHHALRNAFIPLVTVIGLTFAVLISGAVVTEQVFGIPGAGQLLIRAVNR 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++QG VL+VA + +++NL+VDL+Y ++PRI + Sbjct: 277 RDFPLIQGIVLIVALLYVIINLIVDLIYVFLDPRIHYS 314 >UniRef50_UPI0001C354AE putative ABC-transporter permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C354AE Length = 328 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 192/338 (56%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL+RLG+ + +++++F VHM+PGDP ++ G S + A + LD+ Sbjct: 13 MGRYILKRLGISVAVIFLVSVISFTLVHMLPGDPAVLALGSEA-SEQDIATFREKYYLDR 71 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY +I + GDLG S+ PV R T+ +G+ A+I ++ +GI G++ Sbjct: 72 PIVEQYFIWITDTLRGDLGDSITYSRPVLTCLAERLPRTISIGLPALILSSILGILCGII 131 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++RG D+ ++ G P FW G++ I + + P+SG VS Sbjct: 132 SAIRRGKFIDNLITFVSTIGLGAPQFWLGIVGIYIFGMKLGWLPLSGYVSPG-------- 183 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 NF + + ++P ++L LA + R TRS+MLEV+ +DYIRTA Sbjct: 184 ---------------ENFGQYIYYGVMPILILSFSLLASVARQTRSNMLEVVNQDYIRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL VI HAL+NA++PV+T IGLQV ++ G+++ E +F+ G+G ++ A+ Sbjct: 229 RANGLAEKSVIYKHALKNALIPVITTIGLQVRVVVGGSLMVEQVFNIAGIGTLIVSAING 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY VVQG V +++ +LVN L+DLLYG V+PRIR Sbjct: 289 RDYMVVQGCVFVISVFTVLVNFLIDLLYGFVDPRIRKS 326 >UniRef50_A9WKA7 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Chloroflexi RepID=A9WKA7_CHLAA Length = 323 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 194/338 (57%), Gaps = 15/338 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++LRRL + T ++L+ F + + PG + + A + ++ A++ A LGLD Sbjct: 1 MTTYLLRRLLQAVLTLFVVSLILFGLISVTPGGFMTVYAEKSDMTAADLARIRANLGLDD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ ++ GD G S+ S+ PV EE R TL L +I V IP+G+L Sbjct: 61 PVPIRYVKWLGNLLKGDWGRSLTSKRPVLEEIGSRLPNTLLLMSLMLICTLLVAIPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ S D+ +A G S+P+FW+G++LI++ SV + Sbjct: 121 SAIRQYSWLDNVLTTIAFAGQSLPVFWFGLLLIIVFSVLLR---------------GPDG 165 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 GE + D + H+ILP +L + A +R RS+ML+V+ EDYIRTA Sbjct: 166 KPLLPGSGMYTLGEPFSLWDRIRHLILPVTMLTFVSAAEYMRYMRSAMLDVIHEDYIRTA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P+VT++ L + +L AGA+ TETIF+WPG+GR A + Sbjct: 226 RAKGIQEWVVIYKHALRNAIIPLVTLLSLDLPSLFAGALFTETIFAWPGIGRLYFTAALK 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYP+V + + + +IIL NLLVDL+Y +++PRIR Sbjct: 286 NDYPLVMAILTIYSALIILSNLLVDLIYAMLDPRIRLS 323 >UniRef50_D1JCG7 ABC transporter, permease protein n=2 Tax=uncultured archaeon RepID=D1JCG7_9ARCH Length = 320 Score = 385 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 135/340 (39%), Positives = 213/340 (62%), Gaps = 30/340 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGL 58 ML +I++RL L+IP +TL++F+ + +IPGDP + G P+ ++GL Sbjct: 6 MLNYIIKRLILLIPILFLVTLISFSLLFIIPGDPAETILTGPGGGADPKAVEAFRIKMGL 65 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 DKP++ QY ++ V+HG+LG S +S+ PV + +PRF ATL+L + ++I + + IP+G Sbjct: 66 DKPVYIQYFTWLESVLHGNLGYSYQSKRPVIDTILPRFHATLKLAIVSLIISLLISIPLG 125 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A+K+ S D+ ++ AL G SMP FW G++LI+L ++ PV+G Sbjct: 126 IISAIKQYSAIDNVSMVGALLGVSMPNFWQGLLLILLFAITLGWLPVAGYGDHGD----- 180 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + H+ILPAI LGT A+ R+ RS+MLE + +DYI+ Sbjct: 181 -----------------------LEHIILPAITLGTSSAAITTRLMRSTMLETINQDYIQ 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 ARAKGL+ VI HAL+NA++PVVT+IGL LL G+++ ETIF+WPG+G +++++ Sbjct: 218 AARAKGLSERVVIGKHALKNALIPVVTMIGLNFAYLLDGSVVVETIFAWPGIGLLMVESI 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QG +L VA + I VNL+VD+LY ++PRIR++ Sbjct: 278 YMRDYPMIQGCILFVAIIFIFVNLMVDILYTYLDPRIRYE 317 >UniRef50_C8W4W6 Binding-protein-dependent transport systems inner membrane component n=3 Tax=cellular organisms RepID=C8W4W6_DESAS Length = 316 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 136/341 (39%), Positives = 203/341 (59%), Gaps = 33/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISP--ERHAQLLAELGL 58 M+ ++L+RL +IP G++++TFA +++ PGDP I+ G+ P E + E GL Sbjct: 1 MILYLLKRLFYLIPVMFGVSIITFALINLAPGDPAEILLRSSGVEPTLEAVEAMREEFGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + ++ QY H++ V+ DLG S ++ PV E + RF ATLEL + A+ F + +P G Sbjct: 61 NNSVYMQYFHWLVKVLQLDLGNSFRTGQPVALEVLSRFPATLELTLAALFFMLLLAVPSG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AA+ + + DH + +AL G SMP FW G++LI +++V +L PV GR Sbjct: 121 ICAALYKNAWIDHFSRLVALFGASMPAFWLGLLLIYILAVKLHLFPVMGRG--------- 171 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +H++LP+ LG A R+ RSSML+VLG+D+I+ Sbjct: 172 ----------------------GWSHLVLPSATLGFGLAATYTRLLRSSMLDVLGQDFIK 209 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 ARAKGL +I HA+RNA+LPVVTV G+ G LL G + ETIF+WPG+GR +D++ Sbjct: 210 VARAKGLQEKLIISRHAMRNALLPVVTVFGMSFGHLLGGTAIVETIFAWPGVGRLCVDSI 269 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYPV+Q VLL+A + +LVNL+VD+ Y ++PRIR K Sbjct: 270 FNRDYPVIQAYVLLMALVFVLVNLIVDISYVFLDPRIRLGK 310 >UniRef50_C0CUX1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUX1_9CLOT Length = 315 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 193/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ + +RRL IPT I + ++ F + +PG+P + M + + E A + A++GLD+ Sbjct: 1 MINYTIRRLLSAIPTLIIVAVMVFFLIRCVPGNPALTMLSDDA-TVEEIAAMEAKMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ ++ + GD G S+ P + R ++T L + AM F+ +G+P+G+ Sbjct: 60 PVPVQFAKWVGNAVRGDFGSSIYYDEPAMSVVMSRLESTWMLVIMAMFFSILIGVPLGIT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV R D + L++ G SMP FW + L++L ++ + P G Sbjct: 120 AAVHRNGPLDKLCMVLSMIGISMPGFWLALNLVILFAIKVPIFPAVGYAYISE------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G + ++ +++LPAI LG A + R+TRSSML+VL DYIRTA Sbjct: 173 ---------------GGLVKSMRYLLLPAIALGLQRSASLARVTRSSMLDVLNSDYIRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL V+ VHAL+NAM ++T +G+ + LL GAI+ E +F+ PGLGR D++ R Sbjct: 218 RSKGLRERAVVYVHALKNAMNQIITQLGISIAHLLGGAIVMENVFNIPGLGRLAFDSIVR 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +L VA + ++VNL+VDLLY +PRI +K Sbjct: 278 RDYPVIQAHILYVAFIYVIVNLIVDLLYKFFDPRIEYK 315 >UniRef50_B3EH22 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Chlorobiaceae RepID=B3EH22_CHLL2 Length = 321 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 190/338 (56%), Gaps = 18/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +IL+RL L +P G+ LTF + + PGDP + G+SP Q+ A+ GL+ Sbjct: 1 MLTYILKRLLLSVPLIFGVLTLTFFIIRLAPGDPAAFFI-QPGVSPNVAEQIRAQYGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ ++ V+ GD G S +++ PV+E T+ + ++ GI +G+ Sbjct: 60 PLPVQYVKWLGNVLQGDFGRSFSRAQQPVFEVIAEALPITVTIAALTLVANFTFGIIIGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AV++ S D AL YSMP FW+ +M+I+L ++ P SG Sbjct: 120 ISAVRQNSFLDRFLTVTALFFYSMPEFWFALMMIILFALKLQWFPASGLNEIGAES---- 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +G G F+D + H++LP VL A I R R SMLEV+ +DYIRT Sbjct: 176 ------------FGPFGFFLDRIWHLVLPVTVLSINGSAGIARYVRGSMLEVIRQDYIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL VI HALRNA+LPV+T+IG + + +GA+ E IF++PG+GR ++A+ Sbjct: 224 ARAKGLPEKVVIFHHALRNALLPVITLIGSSLPFIFSGALFIEVIFAFPGMGRVTVEAIF 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++ + T+I+L NLL D+LY V +PRIR Sbjct: 284 ARDYPLIIANTFISGTLIVLGNLLADVLYAVADPRIRL 321 >UniRef50_Q18HF1 ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein n=7 Tax=Halobacteriaceae RepID=Q18HF1_HALWD Length = 347 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 151/342 (44%), Positives = 211/342 (61%), Gaps = 10/342 (2%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+ RR+ L++P G+ L F+ + + PGDP I+ G+R S ++ AQ+ +ELGL+ P+ Sbjct: 5 RFLFRRVLLLVPVLFGVATLVFSILQLAPGDPARIIVGQRA-SAQQVAQVRSELGLNDPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMK--SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY+ ++ D G S K PV R TLEL + I +GIP+GV+ Sbjct: 64 WVQYIRFLIDAATFDFGQSYKIAQGEPVQNVLASRLPVTLELAIYGQITGILLGIPLGVI 123 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN- 179 +AVK+ S+ DH ALTG S+PIFW G +LI+L S + P SGR+ +FL + Sbjct: 124 SAVKQDSLTDHLTRVGALTGISVPIFWSGPLLILLFSTFLGILPTSGRIGSTIFLSEQWS 183 Query: 180 ------PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 PLTG + IDT + GE FI AV H++LP +VLG +A++ RM RSSMLEV+ Sbjct: 184 LFGMELPLTGMVTIDTLLLGEFDAFISAVRHLLLPVLVLGIYQMALLSRMMRSSMLEVVR 243 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 +DY+RTARAKG I+ H +NA++PVVTVIG+Q GTLL GA+LTET+F G+G Sbjct: 244 QDYMRTARAKGQGAKITILKHGFQNALIPVVTVIGIQFGTLLGGAVLTETVFGIGGIGTM 303 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 L+ A+ DYP+VQG VL A + VN VD+ Y ++PRI Sbjct: 304 LVSAIGASDYPLVQGTVLTFALLFTFVNFGVDITYSYLDPRI 345 >UniRef50_C1D3H5 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3H5_DEIDV Length = 317 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 131/339 (38%), Positives = 192/339 (56%), Gaps = 23/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLD 59 M +++RRL IP + IT + F + PGDP+ + S ++ + ELGLD Sbjct: 1 MGTYVVRRLLTTIPLLLVITAIIFTMLQFTPGDPMDAYIPPDQVISVQQREIIRTELGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P QYL ++ GDLG +K+ PV E R TL L M A+G+ GV Sbjct: 61 QPKPVQYLRWLGKAAQGDLGYRIKNGEPVTSEIARRLPPTLMLMGLGMTLGVALGVFFGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAAVKR + D+ LA G S P F G++ + + ++ P G + Sbjct: 121 LAAVKRYTALDNGLTFLAFLGISTPAFLAGLIGMYVFALKLQWFPAGGYQTPG------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 DG+ +D ++H+ILPA +L +AV++R TRSS+L+V+ +DY+RT Sbjct: 174 ---------------DGSVLDTLSHLILPASILSVTYIAVLMRYTRSSVLDVVFQDYVRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKG+ RVI H LRNA++PVVTVIG V L+ GA+ E+IFSWPG G+ +DA+ Sbjct: 219 ASAKGVPHTRVISKHVLRNALIPVVTVIGANVANLIGGAVFLESIFSWPGTGQLYLDAID 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G L++AT+I+L NL+ D+LYG ++PRIR+ Sbjct: 279 SRDYPMIMGTTLVLATVILLANLITDVLYGAIDPRIRYS 317 >UniRef50_D1Y609 ABC transporter, permease protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y609_9BACT Length = 324 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 130/336 (38%), Positives = 205/336 (61%), Gaps = 32/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI +R+ +++P +G+ LL F+ ++ PG P + G+ + E A+ AE GL+ Sbjct: 1 MLKFIGKRILMMVPVMLGVVLLVFSMMYFSPGKPEDYILGDMA-TVEDKAKFRAENGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY +YI + GDLGIS ++ PV E + RF T +L + + A A+GI G++ Sbjct: 60 PFIIQYFNYIRKALTGDLGISYTTKQPVVTEIMSRFPTTFQLAFFSTLIAVALGIVTGII 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ +I+D+ LA+ G SMP FW G++LI+L SV P SG S Sbjct: 120 SAVKQYTIWDNICRVLAMIGVSMPNFWQGLLLIILFSVVLRWFPSSGFSS---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H++LPA+ +GT A ++RMTRSSMLE + +DY+RTA Sbjct: 170 ---------------------WKHVVLPALTIGTSSAASVMRMTRSSMLEAIRQDYVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG + ++V+ HA RNA++PV+TV+G+ G +L GA ++E +F+ PGLG +I A++ Sbjct: 209 RSKGQSEVKVVWHHAFRNAIIPVMTVVGVNFGKMLGGAAISEVVFAIPGLGNLIIGAIRV 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 ++ P+VQGG++ +A + +VNL++D+LY V+PRIR Sbjct: 269 KNAPLVQGGIMFIALAMSIVNLVIDVLYAYVDPRIR 304 >UniRef50_A2SRD5 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Methanomicrobia RepID=A2SRD5_METLZ Length = 316 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 132/342 (38%), Positives = 200/342 (58%), Gaps = 31/342 (9%) Query: 1 MLQ-FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELG 57 ML+ + +RRL +IP I I+ L+F+ +++ PGDP IM G Q G Sbjct: 1 MLREYFIRRLLYLIPILIFISFLSFSLIYIAPGDPAEIMMTSPGGGYDEAAVEQFRVAHG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+P QY+ ++ GDLG S S PV+E + F+ TL L A++ A + IP+ Sbjct: 61 LDQPFIVQYMTWLKNAATGDLGYSYMSEQPVFETVINAFKNTLTLSALALVIALIIAIPL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G+++AVK +IFD AL G SMP FW ++I++ SV + P G Sbjct: 121 GIISAVKHNTIFDSLCRFGALIGVSMPNFWQAYLMIIVFSVILHWLPGGGF--------- 171 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +++MILPA+VLGT AV++RM RSSML+VLG++YI Sbjct: 172 -------------------GHGTDISYMILPALVLGTGSAAVMMRMVRSSMLDVLGKEYI 212 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 +TARAKGL+ V++ HAL+NA++P++TV+GL +G LL G+++ ETIF WPG+G ++ + Sbjct: 213 QTARAKGLSEATVLMRHALKNALVPIITVVGLSIGFLLNGSVVVETIFGWPGIGNLVVSS 272 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + DY ++QG +L VA + +++N +VDLLY NP IR+ + Sbjct: 273 ILSYDYMMIQGSILFVAIIFLVINFIVDLLYVWANPEIRYDR 314 >UniRef50_Q5WKK0 Oligopeptide ABC transporter permease n=8 Tax=Bacteria RepID=Q5WKK0_BACSK Length = 321 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 145/335 (43%), Positives = 201/335 (60%), Gaps = 24/335 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+ +RL +IPT ++L+ F ++PGDP +M G + S E L ELGLD+ Sbjct: 1 MIHFVGKRLLDLIPTLFVVSLVIFIITRLLPGDPASVMLGPQA-SVEDVEALRGELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QQ LHY ++ D G S PV + RF TL L V A+ A VG+P G++ Sbjct: 60 PFFQQLLHYFKDLLQLDFGTSAYYNEPVLSLIMDRFPNTLLLAVSALAIALLVGVPAGMI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KR S+ D+ +L G SMP+FW G+M ++ SV P +G S Sbjct: 120 AAAKRNSVIDYLVTFGSLVGVSMPVFWLGVMFVLFFSVQLGWLPATGMGSL--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D D +++LP++ L TIP+A R+TRSSMLEV +DYI+TA Sbjct: 171 --------------DNGLWDFFKYLLLPSVTLATIPMAEFARITRSSMLEVGAQDYIKTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HA +NA+ P++TV G+QV LL GA+LTETI++WPG+GR ++DA+ + Sbjct: 217 RAKGLKEFWVISKHAFKNALTPLLTVTGMQVSMLLGGAVLTETIYAWPGMGRMIVDAIDK 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD+ VVQG VL +A + +LVNL+VDLLY VVNPR+ Sbjct: 277 RDFIVVQGSVLFIALIFVLVNLVVDLLYKVVNPRV 311 >UniRef50_A8F4X4 Binding-protein-dependent transport systems inner membrane component n=7 Tax=Thermotogaceae RepID=A8F4X4_THELT Length = 321 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 179/338 (52%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RRL + IP + IT++ F ++ PGD + + +S ++ + E GL+K Sbjct: 1 MLKYIGRRLVISIPELLVITMMIFLIMYAAPGDFLDQYRLDPSVSQKQLEAMEEEFGLNK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QYL ++ ++ G+LG S R PV + R ATL L + ++ + GI +GV Sbjct: 61 PPVIQYLVWLKNLLKGNLGYSFSYRRPVSDLIWERVAATLILSLISLASSWIFGIALGVF 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+K+ S D LA ++P F+ G++++ + P+SG S Sbjct: 121 SALKKYSFADKLLTFLAFAFVAIPEFFLGLVMLY-FAAKSGWFPISGMKSVYYSS----- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ILPA L A ++R R S+L+VL EDY+ A Sbjct: 175 -----------LSTWERFKDILWHLILPATALSLGSFAGLMRYMRGSLLDVLNEDYVTFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HA+RNA+ P++T +G + LL GA+ E +F WPG+GR + AL + Sbjct: 224 RAKGMPERVVIFKHAMRNAINPMITFLGFSISGLLGGALFIENVFGWPGMGRLIYQALIQ 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D +V L+ A ++++ NL+ D+L +V+PR+R Sbjct: 284 QDMYIVMASGLISAILLVIGNLVADILLALVDPRVRLS 321 >UniRef50_D2RRT8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RRT8_9EURY Length = 333 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 189/338 (55%), Gaps = 10/338 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++ + R+ IP IGI+++TF ++ PGDPV +M + S E + GLD+P Sbjct: 4 LKYTIHRVLQAIPVLIGISVITFLLANLGPGDPVSLMLQGQEHSEELVRSIEQRYGLDRP 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + ++YL Y+ G++ GDLG S+ + PV + R TL L + A FA IP+GV+A Sbjct: 64 LHERYLTYMAGLVQGDLGRSIHYQRPVAGLMLDRLGPTLLLVLSAYAFALVTAIPLGVIA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +R DH + +AL G S P FW G++LI++ +V P SG V + Sbjct: 124 ADRRNEPTDHVSRIVALVGVSTPSFWIGIVLILVFAVKLGWLPSSGLVYPWRPPSAYRWI 183 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 G + ++ H++LP I LGT+ +A I+R+ R+ M+E L +Y+R AR Sbjct: 184 D----------GHLELYYQSLRHLLLPMIALGTLQMATIMRVERTQMIESLQGEYVRLAR 233 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G+ V+ HA + A LP++T++GL + T + GA+L ET+F G+GR IDA+Q Sbjct: 234 AYGVPERTVLRKHAFQPAQLPIITIVGLNLSTAIGGAVLVETVFDINGMGRLFIDAIQSN 293 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DY +V G + + + ++ ++ D+ Y ++PR+ + + Sbjct: 294 DYQLVMGITMTLGALFVIGVIITDISYAYIDPRVTYGE 331 >UniRef50_A8R8I3 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8I3_9FIRM Length = 327 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 120/340 (35%), Positives = 195/340 (57%), Gaps = 15/340 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 M+++I +RL +IP I+++ F V +PGDPV G + + + E GLD Sbjct: 1 MVKYIFKRLINLIPVVFIISVVIFGTVKAMPGDPVNAYLGAGSRATEAQKDSIRREWGLD 60 Query: 60 KPMWQQYLHYIWGVMH-GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ +QY+ ++ ++ GDLG S K + PV + T L V A+I A+ IP+G Sbjct: 61 RPLPEQYVTWVKNMVTKGDLGQSTKFKQPVADIIGEYVWNTFLLNVVALIIGIALSIPIG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AVK+ S FD+ +L G S+P F++ ++L+ +++ PVSG + L Sbjct: 121 IRQAVKKFSKFDNFWTVFSLLGVSVPTFFFALLLVFYIAIPTGALPVSGMRDASMALIGY 180 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + D HMILP VL A R RS+M++V+ +DY+R Sbjct: 181 DNI-------------FQEIADVAVHMILPVTVLAFSNFATFSRYVRSAMIDVINQDYVR 227 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL VI HA +NAM+P+VT++GL + +L +GA++ E++F+WPGLG+ L+DA+ Sbjct: 228 TARAKGLKEKVVIYRHAFKNAMIPLVTLLGLYIPSLFSGAMILESVFAWPGLGKILVDAI 287 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D ++Q +L A +++L NLL D+LY VV+PR++ + Sbjct: 288 TNQDQAIMQACLLFSAILMVLGNLLSDVLYSVVDPRVKVE 327 >UniRef50_A1WQT8 Binding-protein-dependent transport systems inner membrane component n=13 Tax=Proteobacteria RepID=A1WQT8_VEREI Length = 338 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 137/337 (40%), Positives = 195/337 (57%), Gaps = 18/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML+ RL + + +L F VH PGDPV +AG G +SPE AQL + GLD Sbjct: 17 MLRHTAARLLQAAGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRQQYGLD 76 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ Q Y+ V+ GDLG S PV + R ATL L + A+ A VG +GV Sbjct: 77 QPLPVQLWVYLGKVVQGDLGHSYFFNQPVAQMIAARVPATLLLMLSAVSLAFGVGTALGV 136 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+A K L+L G++ P+FW G+ML++L++ + PV+G S Sbjct: 137 LSARKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLASVLPILPVAGMRSIDASG---- 192 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 G G+ +D H++LP + L + LA R+ RS+ML+VLG D+IRT Sbjct: 193 -------------GGIGDVLDVAHHLVLPTLTLSLVYLAQYSRLARSAMLDVLGADFIRT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL V+ HALRNA+LPVVTV+GLQ G +LAGAIL ET+F+WPGLGR +++ Sbjct: 240 ARAKGLAERVVLYRHALRNALLPVVTVLGLQFGNMLAGAILVETVFNWPGLGRLAFESVL 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RRDYP + G +L + +++ +N + DL Y +++PRI+ Sbjct: 300 RRDYPTILGVLLFSSIVVVAMNQITDLCYRLIDPRIK 336 >UniRef50_C4WPT9 Dipeptide transport system permease protein dppB n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPT9_9RHIZ Length = 343 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 135/338 (39%), Positives = 207/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+++R+ + IP IG+T+L F +++IPGDP+ ++ E S E ++ A++ LD Sbjct: 32 MLTFLIKRIAVSIPVLIGVTVLLFIMMNIIPGDPIALLMKEHA-SAEVIERVRAQMHLDD 90 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y +++ + GDLG+S+K V + F TL L CA + + +GIPVG+L Sbjct: 91 PLITRYFRFLFAAVQGDLGVSIKLNRDVTTLILQAFPNTLYLAACAALVSWMIGIPVGIL 150 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVKR S DH +G +L G SMP+FW ++L + ++ PVSG Sbjct: 151 SAVKRDSALDHFFMGFSLLGVSMPVFWSALLLQYIFAMQLKWLPVSGFY----------- 199 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ILPAIVLG VI R+TRSS+LEV+ DY+RTA Sbjct: 200 --------------------GFKYVILPAIVLGWSSAGVIARLTRSSLLEVMRNDYVRTA 239 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL + VI+ HA++NA++PVVT++ +QV LL+GA++TE IF PG+GR ++A+Q Sbjct: 240 RAKGLREIFVILRHAVKNALIPVVTIMAIQVAGLLSGAVITEAIFGIPGIGRISVNAIQA 299 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG VL ++++ NL+ D+LY V++PRIRH+ Sbjct: 300 RDMPLLQGSVLFATVLVLIGNLVADILYSVLDPRIRHQ 337 >UniRef50_D1C9E9 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Bacteria RepID=D1C9E9_SPHTD Length = 336 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 142/332 (42%), Positives = 212/332 (63%), Gaps = 4/332 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKPMW 63 I+ RL + I + F F+ +PGDPV ++ G+ G +S E+ L A+ LD+P+ Sbjct: 6 IVERLIATGVLMLAIAVFVFFFMRYLPGDPVDLIMGQEGNVSQEQIDLLKAQYRLDQPLH 65 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q Y+ GV+ GDLG S+ R PV + RF AT+EL + A++FA AV +P+G L+A Sbjct: 66 VQLSSYLSGVLQGDLGTSIVQRKPVTGLIMDRFPATIELALGALLFALAVALPIGTLSAY 125 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 R S D ++ A G SMP FW G++LIML +VH PV GR + + +TG Sbjct: 126 WRNSPVDRLSMAGAFVGISMPGFWLGIVLIMLFAVHLKWLPVGGRATIGLEP---EHVTG 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 ++D+ + + +D++ H++LP++ LG + A++ R+ RSSMLE L +DY+R ARAK Sbjct: 183 LYVLDSILTRDGKALVDSLKHLVLPSVTLGAVMAALLARVVRSSMLEALSQDYVRLARAK 242 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL + V+ HALRNA++P VT++GL+VGTLL G ++ ET+FSWPG+GR ++DA+ RDY Sbjct: 243 GLHELVVVGKHALRNALIPTVTILGLEVGTLLGGNMIVETVFSWPGIGRLVVDAIFARDY 302 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 P+VQG V++ A L NL VD+ Y +NP+I Sbjct: 303 PLVQGVVIIYACTFALANLAVDIAYTYLNPKI 334 >UniRef50_B0PH75 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH75_9FIRM Length = 321 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 204/338 (60%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I ++L +IP + ++++ F ++++PG+ M + G+ G + E+ QL AELGLD+ Sbjct: 3 MAASIGKKLLSMIPLALIVSIILFGLINLLPGNAAMAILGDSG-NLEQIEQLEAELGLDQ 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY++++ GV GDLG S+ + PV + R T EL V +++FA AVG+P+G++ Sbjct: 62 PVYIQYINWLKGVCTGDLGTSILTGQPVIDRIAERMPVTFELIVLSVVFAAAVGVPLGII 121 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV+R D+ +++ G +MP FW GM+LIML S+ + P SG Sbjct: 122 CAVRRNRASDYILSSVSIIGVAMPAFWVGMLLIMLFSIKLHWLPASGYTPF--------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 N ++ + M LP G A IVR TRS++L+VLG+DY+ TA Sbjct: 173 --------------FENPVENLRSMALPVFATGIALAATIVRQTRSAVLDVLGQDYMMTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 ++KG+ + HAL+NA++PV+T I +Q+ ++ G+++ ET+F PG+G+ ++DA+ + Sbjct: 219 KSKGVRYRTQLWRHALKNALIPVITAISMQIAGMIGGSVVIETVFLLPGMGKSMVDAIFQ 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+V G L++A IIL+N LVD++Y V+PRI Sbjct: 279 RDYPIVMGEALVIAVFIILLNTLVDVIYIFVDPRISRS 316 >UniRef50_C9M8R7 Glutathione ABC transporter, permease protein GsiC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8R7_9BACT Length = 307 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 137/336 (40%), Positives = 202/336 (60%), Gaps = 33/336 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I+RR+ L+IP + + + F ++ PGDP I GE ++P+ A AE GLDK Sbjct: 1 MVKYIVRRILLLIPIVLSVMFILFTILYFTPGDPARIALGEE-VTPDAIAAFRAEHGLDK 59 Query: 61 PMWQQYLHYI-WGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P + Q+ +Y+ V GDLG S + PV E R T++L A++F+T VGIP+G+ Sbjct: 60 PFFVQFGNYVYRAVFKGDLGYSYAMQSPVSMEIGHRVPVTMKLAFWAVVFSTVVGIPLGI 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A+++ SI D + L G SMP FW G+++I+ SVH P G Sbjct: 120 ICAIRQYSILDSITTLITLLGVSMPTFWTGLLMILAFSVHLGWFPSMGF----------- 168 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+V+ M+LP L LA+I RMTRSSMLEV+ DY+RT Sbjct: 169 --------------------DSVSAMVLPVFTLSGSSLALIARMTRSSMLEVIRSDYVRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG T +VI HAL NA++P++T++ +Q GTLL G+I+TE +FS G+GR +I+A++ Sbjct: 209 ARAKGQTERKVIYRHALPNALIPIMTIVSMQFGTLLGGSIVTEAVFSISGIGRLMIEAIK 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYP++QGGVL ++ L+NL VD++Y V+PRI Sbjct: 269 MRDYPIIQGGVLFISIAFCLINLFVDVMYAFVDPRI 304 >UniRef50_A6M0G0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M0G0_CLOB8 Length = 323 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 198/336 (58%), Gaps = 18/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +++ RRL IP IGI+++ F V + PGDP M + +S E ++L +LG + P+ Sbjct: 6 KYVFRRLIQTIPVLIGISIIVFMLVKLQPGDPFSSMM-DPNLSQEMKEKMLEQLGYNDPI 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ + G+LG S++ + PV R T+ L +C+MI + + IP GV++A Sbjct: 65 LIQYFKWLMQALQGNLGYSIQFKQPVLNVIGSRLGNTVILSICSMILSILIAIPCGVISA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ + D+ A G S+P F++GM+LI + SV+ P+SG V+ V L Sbjct: 125 TKQFTKTDYIVTVFAFIGLSIPSFFFGMILIKVFSVNLGWLPISGMVTTGVNLTGLPF-- 182 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ID HM+LP IVL + A ++R TRS M+E+L DYIRTAR+ Sbjct: 183 ---------------VIDVAKHMLLPMIVLALMNTASLMRYTRSDMIEILKTDYIRTARS 227 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KG+ + VI HAL+N +L ++TV+ +Q+ +LL+GA+LTETIF WPG+GR +A+ RD Sbjct: 228 KGVRKRNVIYQHALKNELLTLITVVTMQIPSLLSGALLTETIFVWPGIGRLNYNAVISRD 287 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP++ G V++VA + + NLL D+LY VV+ RI Sbjct: 288 YPLIMGIVMMVAIISLFTNLLADILYAVVDKRIEFD 323 >UniRef50_C1EU78 Oligopeptide ABC transporter, permease protein n=74 Tax=Bacteria RepID=C1EU78_BACC3 Length = 334 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 180/336 (53%), Gaps = 20/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RRL +IPT G +++ F ++PGD + I+PER A+L GL+KP+ Sbjct: 19 TYIVRRLLQMIPTLFGTSIIIFFLFALLPGDYID---SNPKITPERAAELRELYGLNKPI 75 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 ++Y H++ + GD G S++ + PV + + V A+ F + + +GV +A Sbjct: 76 VERYFHWLGNALQGDFGFSLQYQEPVTSLLNKFIWNSFSVAVIALFFIWLIALIIGVFSA 135 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ S+FD S P F+ G+ LI + +V + L P+ G + Sbjct: 136 TKQHSLFDKLVTIGVFAAMSFPSFFIGLFLIKVFAVDFKLLPIGGMIDVGSNSTG----- 190 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 I+ HMILP +L + + + R R+SMLEV+ +DYIRTARA Sbjct: 191 ------------FAYVIEVAKHMILPVFILTLLGVGSLTRYFRTSMLEVVRQDYIRTARA 238 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RD Sbjct: 239 KGLKEKTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGNIQLEALNFRD 298 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Y V+ + ++ + I+ N D++Y VV+PRIR K Sbjct: 299 YTVLMAFTMFLSCLTIVSNFFADIVYAVVDPRIRLK 334 >UniRef50_Q2YJK1 Putative peptide transport system permease protein BAB2_1050 n=36 Tax=Proteobacteria RepID=Y1050_BRUA2 Length = 314 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 188/338 (55%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M IL+R+ IP + + +LTF + ++PGDP +++AG+ SPE ++ ELGLD+ Sbjct: 1 MTALILKRVAQAIPVMLIVAILTFLLMKLLPGDPAILIAGDGA-SPETVERIRVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q ++W + H DLG S PV + R T+ L + A VGI +GV+ Sbjct: 60 PTVVQLGQWLWNLFHFDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA R S FD + LAL G S+P FW ++ ++L SV P +G V Sbjct: 120 AAYLRDSWFDTGVMSLALLGVSVPSFWLAILAVILFSVTLGWFPSAGYVPF--------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + + +ILPA +L + + RMTRS MLEV+ +DYIRTA Sbjct: 171 --------------LDSPLGWLRSLILPASILALFQIGYLARMTRSEMLEVMDQDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KG++ V+ HA RNA++ V+TV G L+ G+++ E IF+ PGLGR L+ A+ Sbjct: 217 RSKGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQAILA 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQG +L + + + +N+LVD+LY + +PR+R+ Sbjct: 277 RDLPVVQGTMLFLGFLFVAINVLVDILYTIADPRVRYD 314 >UniRef50_A6TPV5 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Clostridia RepID=A6TPV5_ALKMQ Length = 306 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 133/338 (39%), Positives = 210/338 (62%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I +RL IP +T++TF+ +H++PGDP ++ AGE S E+ + +GL++ Sbjct: 1 MHIYIAKRLLQAIPVIFLVTVITFSLIHLMPGDPAIMRAGEGA-SIEQVEAIREAMGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQYL ++ G++ GDLG S++ PV+ + R ATL L + + + + A+G+P+G+L Sbjct: 60 PIHQQYLSWVTGLLQGDLGYSLQDGRPVFSTLIQRLPATLYLVMASFVVSIAIGVPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ + D A G AL G S+P FW+ +M+++L S P SG + Sbjct: 120 SAVKQNTFIDSFARGFALLGISLPSFWFALMMMLLFSYKLQWLPASGSGT---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +AH+I+P++ LG +I RMTRS+MLEVL +DYIRTA Sbjct: 170 ---------------------LAHLIMPSLALGMASAGLITRMTRSAMLEVLKQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL VI HAL+NA+LPVVTVIGLQ+G L G+++ ET+F++PG+GR+ + L Sbjct: 209 RSKGLRAQIVIYKHALKNALLPVVTVIGLQLGYRLGGSVIVETVFAYPGIGRFAYNRLLA 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++ G + + A + I+VN++ D++YG + PRIR+ Sbjct: 269 RDFPMIMGNLFIFAMIFIIVNIITDIIYGFLEPRIRYD 306 >UniRef50_Q5SIN2 Peptide ABC transporter, permease protein n=2 Tax=Bacteria RepID=Q5SIN2_THET8 Length = 306 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 153/338 (45%), Positives = 218/338 (64%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ + +PT +G+ LL F V + PGDP +++AGE +PE + GLD+ Sbjct: 1 MLTYLLRRILIAVPTLLGVVLLVFLMVRLAPGDPAILLAGEFA-TPETLEAIRTRYGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Q+ Y+ ++ GDLG S +SR PV EE F T+ L A++ A A GIP+G+L Sbjct: 60 PLPEQFALYLGALLQGDLGESARSRRPVLEELKTYFPNTVVLATAAILVALATGIPLGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS D + LAL G SMP+FW+G++ I++ SV PV+G+ + Sbjct: 120 AALRQGSWLDLGVMVLALLGVSMPVFWFGLLAILIFSVELGWFPVAGKGT---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +AH++LPA+ LG A++ RMTR +++EVL +DYIRTA Sbjct: 170 ---------------------LAHLVLPAVTLGINATALLARMTRGTLVEVLSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HALRNA++PVVTV GL+ G+LLAGA++TETIF+WPGLG+ L+ ++ Sbjct: 209 RAKGLAERVVIFKHALRNALIPVVTVAGLEFGSLLAGAVITETIFAWPGLGQLLVGSILS 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VLLVA LVNL+VDLLY ++PR+R+ Sbjct: 269 RDYPVVQGAVLLVAFTFTLVNLMVDLLYAWIDPRVRYD 306 >UniRef50_UPI00019735EB peptide ABC transporter permease protein y4tP n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735EB Length = 328 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 136/334 (40%), Positives = 202/334 (60%), Gaps = 26/334 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + IL+RL +IP + + +TF F MIPGDPV+ + G++ +PE +L AE+G+DK Sbjct: 11 MAKMILKRLIQIIPILLIVLTITFIFTRMIPGDPVLTVLGDQA-TPEMVEKLRAEMGMDK 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY+ YI ++HGD G S PV E R TL++ + +M A +G+ VG+L Sbjct: 70 SIPEQYVMYILDILHGDFGTSFAYGRPVLELIAERLPNTLQISLTSMAIAVVIGLSVGIL 129 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK+ S++D+ A +AL G SMP FW +ML++L SV+ + P G + Sbjct: 130 SAVKQYSVWDYLATVIALVGVSMPRFWLALMLVLLFSVNLGILPAFGMGT---------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D V HMI+P I L P A R+TRSSMLEV+ D I+ Sbjct: 180 ---------------SGFGDTVLHMIMPCICLTVAPAATFTRITRSSMLEVINNDSIKAL 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+G++ ++ HAL+NA+ P+VTV GLQ+ T GAILTETIFSWPG+G ++ A+ Sbjct: 225 RARGMSEKAILWKHALKNALPPIVTVFGLQLATAFTGAILTETIFSWPGMGSLIVGAIDN 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR 334 RDY ++QG V+LVA + +NL+ D++Y ++NP+ Sbjct: 285 RDYSLIQGAVVLVAFAFVFINLITDIIYMIINPK 318 >UniRef50_D2ASJ6 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Actinobacteria (class) RepID=D2ASJ6_STRRD Length = 364 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 211/338 (62%), Gaps = 3/338 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 ++F+ RR+ + +GITL+TF +++PGDPV G+R + P AQ AE GLDK Sbjct: 29 IRFLARRVLTALLLAVGITLVTFVLTNLVPGDPVSANLGQRALGDPAIVAQWRAEHGLDK 88 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQYL ++ GV+ GDLG S +S PV ++ ATLEL A++ + G+ GV+ Sbjct: 89 PLPQQYLMHLQGVVQGDLGTSQQSHRPVMDDLAESVPATLELAGAAILISLVAGVAFGVV 148 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++R + DH L+L G S+P FW +M + +TP SGR+ + Sbjct: 149 AALRRDRLSDHLLRVLSLVGISVPTFWLALMAFYVFFYRLQVTPGSGRIDPTMSPPPQ-- 206 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ID+A+ G+ F AV H+I PA+VL + ++ R TRS++LEVLG+DY+R A Sbjct: 207 VTGLYTIDSALAGQWDVFASAVGHLITPALVLALYTIGLLTRFTRSAVLEVLGQDYVRAA 266 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL ++ + LR+A++P++TV GL G+LL+G +L E IF+WPG+G++ + Sbjct: 267 RAKGLPGRVILFRYVLRSALVPIITVAGLAFGSLLSGTVLVEAIFAWPGVGQYAYKSATT 326 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P V G L+V + +++NL+VD+LYGV++PR+R + Sbjct: 327 LDLPAVMGVGLVVGGVYLVINLIVDVLYGVIDPRVRLQ 364 >UniRef50_A0R8T4 Oligopeptide ABC transporter, permease component n=20 Tax=Bacteria RepID=A0R8T4_BACAH Length = 323 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 109/336 (32%), Positives = 179/336 (53%), Gaps = 20/336 (5%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RR +IPT G +++ F ++PGD + ++PER +L GL+KP+ Sbjct: 8 TYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYID---SNPKLTPERAQELRELYGLNKPI 64 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 ++Y H++ +HGD G S++ + PV T + V A+ F + + +GV++A Sbjct: 65 IERYFHWLVNALHGDFGFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISA 124 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 K+ S FD S P F+ G+ LI L++V L P+ G + Sbjct: 125 TKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVDLKLLPIGGMIDIGSNSTGI---- 180 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ++ + HM+LP +L + + + R R+ ML+V+ +DYIRTARA Sbjct: 181 -------------AYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARA 227 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL VI HAL+NA+LP +T++ ++ L +GAI+ E IF+WPG+G ++AL RD Sbjct: 228 KGLKERTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRD 287 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Y V+ + ++ + I+ N L D++Y V+PRIR K Sbjct: 288 YTVLMAFTMFLSCLTIMANFLADIVYAFVDPRIRLK 323 >UniRef50_A5VU90 Putative peptide permease protein BOV_A0351 n=41 Tax=Rhizobiales RepID=Y2551_BRUO2 Length = 319 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 121/338 (35%), Positives = 186/338 (55%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML++ L RL + + + +T+L F + + PGDP+ ++ L A+LGLD Sbjct: 1 MLRYCLHRLLIGLGMLLALTILIFVLLQLTPGDPIDAYINPNVAMTQAEMDALRAQLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QYL ++ + G+LG S+ + V R TL L + A +G+ G Sbjct: 61 RPLPVQYLAWLGQAVQGNLGHSLQRFNETVSGLIASRIGPTLLLMAAGLAIAIVIGVTTG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++AV+R S D++ LAL G S P F ++ + + SV P G ++ Sbjct: 121 IISAVRRNSFPDYSFSVLALLGISSPAFLTALLGLYVFSVRLKWAPSGGMLTPATDFSIP 180 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 D + H+ LPA+VL A+I+R RSSMLE L +DY+R Sbjct: 181 ---------------------DLLRHLALPALVLSIGHAALIMRYMRSSMLETLNQDYVR 219 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ V++ H LRNAMLPVVT+IG +G + GAI E++F+WPG+G LI+A+ Sbjct: 220 TARAKGVREFWVVVKHTLRNAMLPVVTLIGSTIGLAVGGAIFIESVFNWPGMGLLLINAV 279 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 + RDYPV+ G L++ +I+VN+L DL Y V++PRI+ Sbjct: 280 ETRDYPVIMGATLVIGACVIIVNILTDLAYAVIDPRIK 317 >UniRef50_Q7CVP2 ABC transporter, membrane spanning protein (Dipeptide) n=35 Tax=Bacteria RepID=Q7CVP2_AGRT5 Length = 315 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 148/336 (44%), Positives = 205/336 (61%), Gaps = 24/336 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I +RL + IPT + I++ F+ ++PGDPV+ MAGE P L + L+ Sbjct: 1 MPVYIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVLAMAGEER-DPATIEFLREKYRLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL+++ GV+ GD GIS+++ PV E + T++L V AM FA +GIP+G+L Sbjct: 60 PVPLQYLNWLGGVVTGDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ + D+TA +AL+G S+P FW G+MLI+LVSV P SG S V S Sbjct: 120 AAVKKNTWIDYTANIVALSGLSIPNFWLGIMLILLVSVKLGWLPASGYESIFVDPVRSIE 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 MI+PA VLG A ++R TRS+M+ VL DYIRTA Sbjct: 180 T-----------------------MIMPAFVLGNALAATLMRHTRSAMVAVLSSDYIRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ +I+ H+ RNA+LPV+T++ L G LLAGA+LTE IF+ PG G+ +DA+ Sbjct: 217 RAKGLSPREIILSHSFRNALLPVITLLALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFT 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY VVQG VL A IL+NLL D+ Y ++NPR+R Sbjct: 277 RDYAVVQGIVLCTAVGFILMNLLADIAYVLLNPRLR 312 >UniRef50_Q2CJF6 Oligopeptide ABC transporter permease n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJF6_9RHOB Length = 326 Score = 375 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 145/338 (42%), Positives = 213/338 (63%), Gaps = 12/338 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I+RRL L +P +GI ++TF + +IPGDP ++ G+ +PE A L LGLD Sbjct: 1 MTDYIIRRLLLFVPMALGIIVVTFGLLLLIPGDPAAVLLGQEA-TPENIASLRDALGLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + + Y+ ++ GD+G+S+ PV + + R AT+EL + A++ +T VG+ +GV Sbjct: 60 PWFLRLGRYMLELLQGDMGVSIFQNAPVSDIILGRLGATVELALVALLMSTVVGVFLGVT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++G + D A+ LA G SMP++W ++L++ +V P GR +V Sbjct: 120 AAIRQGGVVDAVAMLLAQIGISMPVYWLALLLMLGFAVQLGWLPAIGRGEPLVSA----- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + A+ G D++AH+ LPA+ L A+I R+ R+SMLEVL ED++RTA Sbjct: 175 ------LGMALRGNPAPLWDSLAHIALPALSLALNSAAIISRLVRTSMLEVLREDFVRTA 228 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG+ R V+ HALRNA+LPVV+VIGL+ G LL GAILTETIF+WPGLG+ I A+ + Sbjct: 229 KAKGMRRRSVVWRHALRNALLPVVSVIGLRFGALLGGAILTETIFAWPGLGQLTISAISQ 288 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG VL A + V LLVDLLY V+PRIR + Sbjct: 289 RDIPLIQGIVLTFALIYASVTLLVDLLYAAVDPRIRLR 326 >UniRef50_A0NZ98 D-ala-D-ala transporter subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ98_9RHOB Length = 335 Score = 375 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 139/338 (41%), Positives = 211/338 (62%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML FILRR+ L+IP IG+T++ FA ++PGDPV + AG + L E GLD+ Sbjct: 1 MLYFILRRILLLIPVVIGLTVIMFAIARLLPGDPVSLAAGPNA-TQSEIDALAREFGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY Y+ G++HGDLG S+ +R PV + ATLEL + AM+ A +GIP+G+ Sbjct: 60 PIWTQYFDYLSGLLHGDLGTSLLTRRPVAADIAAYLPATLELVIAAMLIAVCIGIPLGLA 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV R D+ + +A+ SMP F+ G++L + ++ P+ GR+ +V + Sbjct: 120 TAVWRNRWPDYLSQVVAIGAISMPRFFLGLLLQLCFAMWLMWLPLGGRLPIIVIPPPT-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF+ ID+ + G+ F+ A+ H+ +PAI + PLA I+RM R+S +EV+ +DY+ TA Sbjct: 178 VTGFLTIDSLLAGDMHTFVTALRHLAMPAIAMSLSPLATIMRMMRASTIEVMSQDYVTTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL R ++I+ + RNA+ +TVIGL G LL G +L ET+F WPGLG + A+ Sbjct: 238 RALGLPRAKIILKYIARNAVSATLTVIGLYFGWLLGGTVLVETVFDWPGLGLYATKAIIS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +D V G L++ M + NL++DLLYGV+NP++R+ Sbjct: 298 QDMMPVIGVALVIGLMFVAANLVIDLLYGVINPKVRYS 335 >UniRef50_A6X362 Binding-protein-dependent transport systems inner membrane component n=17 Tax=Proteobacteria RepID=A6X362_OCHA4 Length = 315 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 137/336 (40%), Positives = 199/336 (59%), Gaps = 22/336 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+RL V+P +G++++ F + MIPGD + G +PE ++ +LGLDK Sbjct: 1 MPAYILKRLVAVVPVLLGLSIIVFLVMAMIPGDTATALLGSYA-TPENVERINRDLGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY ++ ++HGD G S PV +E + RFQATL L A++ + G+ G++ Sbjct: 60 PLLQQYFIWMGNLLHGDFGRSFVLNRPVLDEVMERFQATLVLAGVALVLCSVFGLLAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV++ D T + L G S+P FW G++LI L +VHW + P SG + Sbjct: 120 SAVRQFGWADRTITFIVLAGISIPSFWLGLLLIYLFAVHWRILPASGMYAVY-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G+ D + H+ILPA L + VI R+TR +MLEVL +DYIRTA Sbjct: 172 -------------GGGDLKDLLWHLILPATTLAVVAAGVIARLTRGAMLEVLRQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RVI HA R A++ V+ VIG+Q G +L GA+ ET+F WPG+G L+ A+ Sbjct: 219 RAKGLNERRVIYGHAFRAALVSVIPVIGIQAGFVLGGAVYIETVFQWPGIGAMLVKAIST 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RD +VQGGVL+VA +L NLL D++ +++PRIR Sbjct: 279 RDILLVQGGVLVVAASYVLFNLLADVIQTMLDPRIR 314 >UniRef50_C0ZHI5 ABC transporter permease protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI5_BREBN Length = 306 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 203/338 (60%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++++RL ++ T +G+++L F VH+IPGDP + G+ +PE +Q+ A+LGLD+ Sbjct: 1 MRRYVIKRLLSLVGTLLGVSVLIFLMVHLIPGDPATQILGQFA-TPEAISQMRAKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+WQQY+ ++ + GDLG S+ + VW++ + RF T++L + ++I A GI +G + Sbjct: 60 PLWQQYMRFVGNLFTGDLGTSLFTGEKVWDQIMNRFPITMQLAILSVIIAAIFGILLGTI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ +I D V +L G S P FW + LI + + L P+SG Sbjct: 120 AAVKQNTIIDRLVVLTSLLGISAPGFWIALFLIWIFAYKLALFPISGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ++LPAI LG +I RMTRSSMLEV+ +DY+RTA Sbjct: 168 -------------------EGIHSLLLPAITLGMAEAGMIARMTRSSMLEVIKQDYMRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG RVI+ H L NA++PVVT++GLQ G L+AGA++ ET+FS G+G I+A+ + Sbjct: 209 EAKGAALFRVILSHGLPNAIIPVVTMLGLQFGALMAGAVVVETVFSLQGIGSLAIEAISK 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P +QG V +A + L NL+VDL+Y ++PRI Sbjct: 269 RDMPTIQGMVFFMALIFALTNLIVDLIYSRIDPRIHFD 306 >UniRef50_C5EKW0 Glutathione transport system permease protein gsiC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKW0_9FIRM Length = 307 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 199/338 (58%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ L+R+ + IP IG+ L+ F + +IPG+PV M GE ++ ++ E+GLD+ Sbjct: 1 MLKKCLKRILISIPVLIGVVLIIFIMLRIIPGNPVTTMLGEH-VNQAIIDKVSREMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + GD G S + V + F T++L VCA + A +GI G++ Sbjct: 60 PLYIQFFRYVGNALKGDFGTSYRLNRNVTGIILEAFPNTVKLSVCAAVVAWIIGITAGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVK+ + D +G AL G SMP+F ++L + + L PVSG Sbjct: 120 AAVKQNRLLDRLFMGCALLGVSMPVFMTALVLQYVFAFKLKLFPVSGY------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D++A M+LPAIVLG I RMTRS+++E + DYIRTA Sbjct: 168 -------------------DSLAAMVLPAIVLGWNSAGSIARMTRSNLVEAMQGDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ HAL+NAMLPVVT++ LQV ++L+GA+LTE++F PG+GR ++A++ Sbjct: 209 RAKGLREWGVIVHHALKNAMLPVVTMMALQVSSMLSGAVLTESVFGIPGIGRLAVNAIET 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P++QG V+ ++I NL+ D+LY V++PRIR Sbjct: 269 RDMPLLQGTVIFTTILVIAGNLVADMLYSVLDPRIREG 306 >UniRef50_A9B5L6 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Bacteria RepID=A9B5L6_HERA2 Length = 346 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 12/348 (3%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I RRL +IP +GI+LL F + IPGDP +I+ GER +PE+ A L +L LD+ Sbjct: 1 MVGYIFRRLLGIIPVLLGISLLVFTLLRTIPGDPAIIILGERS-TPEQRAALRTKLKLDR 59 Query: 61 PMWQ----------QYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFA 110 P++ QY+ YI GD G S+K+R + +E RF AT+EL + A++ A Sbjct: 60 PLFLNFEGGNIFESQYVTYITNFATGDFGDSIKTRQAISKELKQRFPATIELALSALLIA 119 Query: 111 TAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVS 170 VG+ GV++A KRGS D +++ +AL G S+PIFW G+M+ L SV S R+ Sbjct: 120 VVVGVTTGVVSATKRGSWLDASSMIVALLGVSIPIFWLGLMMQYLFSVKLKWLDPSLRLD 179 Query: 171 DMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLE 230 + P+TG L+D + G ++A H+I+P++ L T+PLA I RMTRS+MLE Sbjct: 180 TSLQ-GSFEPITGLYLLDGLLLGRFDITMNAFKHLIMPSLALATVPLASIARMTRSAMLE 238 Query: 231 VLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGL 290 VL +DYIRTARAKGL+ I+ H LRNA++PV+TVIGLQ+G LL GA+LTET+FSWPG+ Sbjct: 239 VLYQDYIRTARAKGLSARITILRHGLRNALIPVITVIGLQLGFLLGGAVLTETVFSWPGI 298 Query: 291 GRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 GRWL+D + RDYPVVQ GV+ V+ + +L+N LVD+ Y +PRI++K Sbjct: 299 GRWLLDGILARDYPVVQSGVMFVSLVFVLINTLVDISYRFFDPRIQYK 346 >UniRef50_C0D8X7 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8X7_9CLOT Length = 313 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 126/338 (37%), Positives = 209/338 (61%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I +RL ++IP IG++ L + + + PGD + +A + + E+ L A+ G D+ Sbjct: 1 MGKYIGKRLLMLIPVIIGVSFLIYFIMDLAPGDVISQLAPDNATT-EQIEALRAQYGYDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 ++ +Y Y+ G+ G+LG+S + PVWE ++ R ATL L + A+I + A+ +P+G+ Sbjct: 60 SVFYRYAIYMQGLFRGNLGVSFLTGQPVWEMYMQRLPATLSLTLGAIIVSIAISLPLGIF 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ GS+ D+ A+ LAL G SMP FW G++LI+ S+H L P G Sbjct: 120 SAIHNGSLGDNAAMVLALLGLSMPNFWLGLLLIIAFSLHLGLFPSGGM------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ ++LPAI +GT A++ R TRSSML+V+ +DY+RTA Sbjct: 168 -------------------SGLSSIVLPAITIGTGYTAIMTRTTRSSMLDVIRQDYLRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG++ VI HAL+NA++P++TV+G Q+ + G++LTET+F+WPG+GR +ID++ + Sbjct: 209 RAKGVSEKAVIRRHALKNALIPIITVVGTQMAACIGGSVLTETVFAWPGVGRLIIDSVNQ 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P V G +++ MI ++ L++DLLY V+PRI+ + Sbjct: 269 RDVPAVTGSIIMTTIMISVILLVIDLLYAFVDPRIKAQ 306 >UniRef50_D1C940 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C940_SPHTD Length = 320 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 122/342 (35%), Positives = 197/342 (57%), Gaps = 26/342 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M Q+++RR+ ++P +GIT++TFA +++PG P+ + + PE ++ LGLD+ Sbjct: 1 MGQYVVRRVLQIVPLVLGITIITFALANLVPGSPISDLEFNPQVRPEDRERIAKALGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ V GDLG+S+ + PV + + + TL L V A+I + + IP+GV Sbjct: 61 PLHVRYIQWLSHVARGDLGLSLITYQPVMKTIMEKLPNTLLLTVTALILSLLIAIPIGVY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLV----SVHWNLTPVSGRVSDMVFLD 176 AV+R S FD A+ G++MP FW G+M+I+++ P G Sbjct: 121 GAVRRNSAFDQVTTVGAVAGFAMPTFWLGLMVILILVRMKGAGLPTLPTGGVCELGNC-- 178 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 + + H+I PA VL + A R RS M+EVL +DY Sbjct: 179 --------------------TVLSRIQHLIAPAFVLAFVQTASWTRYIRSQMIEVLRQDY 218 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +RTA AKGL + V+ H LRNA+LP+VT++ L + TL +G+++ E IF+W GLGR ++D Sbjct: 219 MRTAEAKGLREVVVVFRHGLRNAILPLVTLLALDLPTLFSGSVIVEQIFTWNGLGRLILD 278 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ +RDY VV G L V+ + ++ NLL D++YGV++PRIR+ Sbjct: 279 SVNKRDYTVVMGVTLFVSVLTVVANLLADIVYGVLDPRIRYD 320 >UniRef50_C0QDJ0 DppB1 n=74 Tax=Bacteria RepID=C0QDJ0_DESAH Length = 330 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 205/338 (60%), Gaps = 31/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ +R ++P +++L FAFVH++PGDP +MAG+ L ELGLD+ Sbjct: 24 MLKYFFKRCMAILPVLFVVSVLAFAFVHLLPGDPARMMAGDDA-DEATIEMLRTELGLDR 82 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL Y+ ++ GDLGIS+++ + V++E R+ T+ L M ++ +GI G + Sbjct: 83 PLPVQYLTYMGKLVRGDLGISLRTNLTVFDELKLRYLPTMYLAFAGMAWSVVIGIFFGAV 142 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ G D+TA+ ++++G S+P FW G++ I L SVH PV+G Sbjct: 143 AAIYSGKWQDYTAMMVSVSGISVPQFWLGLLAIQLFSVHLGWLPVAGYTGKFSE------ 196 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +ILP+ LG A++ R T S+ L+VLGE+YI TA Sbjct: 197 ------------------------LILPSFTLGATVAAIMARFTLSAFLDVLGEEYISTA 232 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+T V+ HA RNA++PV+T++GLQ G LL G+++ ET+F+WPGLGR++I+A+ Sbjct: 233 RAKGVTETLVMWKHAFRNALIPVITMVGLQFGFLLGGSVVVETVFAWPGLGRYMIEAVAV 292 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q +LL + + +NL+VD++Y ++NP IR++ Sbjct: 293 RDYPVLQALLLLYSFHFVFINLVVDMVYALINPEIRYE 330 >UniRef50_B2A2W9 Binding-protein-dependent transport systems inner membrane component n=7 Tax=Bacteria RepID=B2A2W9_NATTJ Length = 306 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 198/337 (58%), Gaps = 33/337 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +ILRR+ +IP I+ + F V++ GDPV +M E + E + LGL+ P Sbjct: 3 ANYILRRILQLIPVIFIISFVVFCLVYVA-GDPVTMMLPEEA-TQEEVEAMRESLGLNDP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY ++ ++ GD G S + + R ATLEL V AM+ AT + +P+G+ + Sbjct: 61 FMVQYGRFLINMLQGDFGESYRYNEQALPIVMSRIPATLELTVSAMVVATVIAVPLGIWS 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV + S D G A+ G +MP FW G+MLI++ SV+ + PVSGR + Sbjct: 121 AVNKNSFLDIFVTGGAVLGKAMPNFWLGIMLILIFSVNLRIFPVSGRGT----------- 169 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + H++LPAI LGT A + R+ RSSM+E++ +DYI+TA+ Sbjct: 170 --------------------LLHLVLPAITLGTAIAADMARLIRSSMIEIMNQDYIKTAK 209 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL + ++ +HA +NA++PV+T++ LQV L+ G ++TET+F+WPGLG+ LI A+ R Sbjct: 210 SKGLKKPLIVYIHAFKNALIPVITIMALQVSILVGGTLITETVFAWPGLGQLLIQAVNTR 269 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D +VQ V++++ M+I+VNLL D+LYG V+PRI + Sbjct: 270 DMAIVQAAVMIISFMVIIVNLLADILYGFVDPRINYS 306 >UniRef50_C0BXG5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXG5_9CLOT Length = 335 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 196/338 (57%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+L+R ++ IG+T+L F + +P DP AG + E+ ELGLDK Sbjct: 1 MAKFLLKRFASLVLVIIGVTMLVFLATYYLPSDPARAAAGPSA-TNEQVEAKRVELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QYL Y+ G++ D+G S K++ PV +E R ATLEL ++I + + +G + Sbjct: 60 PIYVQYLEYMKGLLRLDMGTSFKTKQPVAQEISSRLSATLELTAVSLIVFFVLALILGSV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRG + D ++ G ++P +W ++ + P R+ + P Sbjct: 120 AALKRGGVLDGMIRFFSVAGMAVPPYWLALIFQYVFYYRLQWLPAGYRLPVGTMPPE--P 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TGF L+D+A G+ + A H++LP + L + RM R+ +L+ L +DYIRTA Sbjct: 178 VTGFYLLDSAFAGDWALLLQAARHLLLPVLSLVLGYCGITTRMMRTQLLQELRQDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL VI HA++NA+ P++T++G+Q G ++ G +L E IFSWPGLG + +DA+ Sbjct: 238 RSKGLPEHTVIRRHAMKNAISPILTLLGMQAGGMIGGTVLIEKIFSWPGLGSYALDAIAS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D VV G L +A + IL+NLLVD+ Y +++PR+R Sbjct: 298 LDLMVVAGITLTMAVIFILINLLVDISYVLIDPRVRLS 335 >UniRef50_D1C147 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C147_SPHTD Length = 320 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 118/334 (35%), Positives = 185/334 (55%), Gaps = 24/334 (7%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +I+RR+ L+ P +G++++ F +H+ PGDP + E+ P Q+ LGLDKP+ Sbjct: 7 NYIVRRILLLFPLLVGLSMVVFTIIHLAPGDPALAFVSEQSFDPTVVEQVRKNLGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY + V D G + PV R T++L A+ + AV IP+G+++ Sbjct: 67 PVQYGIWASKVARFDFGTAYTFNRKPVITLIGERLSNTVKLQALAISISLAVAIPLGIIS 126 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A ++ S+ D+ A G A G ++P FW +ML + +V P S Sbjct: 127 ARRQYSLVDNLATGGAFLGLALPDFWLALMLQLFFAVRLGWLPASTAGP----------- 175 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 E F++ +++ +LPA VL +A+ R RSSMLEV+ +DYI TAR Sbjct: 176 ------------EAEGFVEKLSYFVLPATVLAIPTIAIFTRFMRSSMLEVIHQDYITTAR 223 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ HALRNA +P+VTV+G Q+ LL+G+++ E +F+WPGLG A+ +R Sbjct: 224 AKGLAERAVVFRHALRNAFVPMVTVVGNQLPRLLSGSVIVEAVFAWPGLGHLGYQAILQR 283 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DYPV+ LL I+++N++VD+LY +++PRI Sbjct: 284 DYPVILALTLLTGAAILVINVIVDVLYAILDPRI 317 >UniRef50_B9ZI20 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZI20_NATMA Length = 302 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 129/327 (39%), Positives = 196/327 (59%), Gaps = 25/327 (7%) Query: 12 VIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIW 71 +IP +G+T++ + V+ PG+P + G+ SPE AQL E+GLD+P +Y ++ Sbjct: 1 MIPVMLGVTIVISSIVYAAPGNPARLALGDGA-SPEAVAQLEQEMGLDQPAHIRYFDWMA 59 Query: 72 GVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDH 131 GV+ GDLG S++S V + R TLEL + AM + IP+GV++AV++ S D+ Sbjct: 60 GVLQGDLGTSIQSGRAVTTLIIERLGPTLELALVAMALTVIIAIPLGVISAVRQYSWVDN 119 Query: 132 TAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAI 191 T++ A+ SMP FW G++LI L +V W PVSGR + Sbjct: 120 TSMFFAIFWLSMPSFWLGLILIYLFAVRWQFFPVSGREGVIFTFT--------------- 164 Query: 192 WGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVI 251 + ++LPAI GT ++ R+ RSSMLE+L EDYIRTAR KG+ VI Sbjct: 165 ---------WWSFILLPAIATGTRRAGLLTRLMRSSMLEILNEDYIRTARGKGIGSKAVI 215 Query: 252 IVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVL 311 H ++NA++PVVT+IGLQV + +G ++ E +FSWPG+GR L+DA+ +RDYPVVQG +L Sbjct: 216 YTHGMKNALIPVVTLIGLQVPLIFSGTVIIEVVFSWPGMGRLLVDAVLQRDYPVVQGTIL 275 Query: 312 LVATMIILVNLLVDLLYGVVNPRIRHK 338 + + ++++ N VD+ Y ++PRI + Sbjct: 276 VYSVIVMVANFGVDIAYTYLDPRIDYS 302 >UniRef50_C1D5B4 DppB n=69 Tax=Proteobacteria RepID=C1D5B4_LARHH Length = 389 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 175/292 (59%), Positives = 214/292 (73%), Gaps = 3/292 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+L+RLGL+IPTF GITL+TF + MIPGDPV +M GER + P HA+ + LGLDK Sbjct: 1 MLSFVLKRLGLLIPTFFGITLITFGLIRMIPGDPVEVMMGERRVDPVMHAEAMHRLGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY Y+ + G+ G S+ +R VW+EFV F AT+EL AM+FA +G+ GVL Sbjct: 61 PLPAQYFDYVSSLAQGNFGESLVTRESVWKEFVTLFPATVELSAAAMLFAIVLGLLAGVL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRGSIFDH +GL+LTG+SMPIFWWG++LIM SV TPVSGR+ M ++ Sbjct: 121 AAIKRGSIFDHGVMGLSLTGFSMPIFWWGLILIMFFSVSLGWTPVSGRIDLMYDIEPQTG 180 Query: 181 LTGFMLIDTAIWG---EDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + G F DA+ H+ILPAIVLGTIPLAVI RMTRSSMLEVL EDYI Sbjct: 181 FMLIDTWRAEMLDPELNAGAFRDALMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYI 240 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPG 289 RTARAKGL+ +RV+ VHALRNA++PV+TVIGLQVG LLAGA+LTETIFSWPG Sbjct: 241 RTARAKGLSPLRVVFVHALRNALIPVLTVIGLQVGVLLAGAVLTETIFSWPG 292 >UniRef50_B3QZ99 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Bacteria RepID=B3QZ99_CHLT3 Length = 310 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 187/338 (55%), Gaps = 30/338 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+ RL I G+ +TF ++++PGDP +M G+R + + ELGLDK Sbjct: 1 MFTFVTHRLLYAIVVIYGVMTITFFLMYILPGDPARLMLGQRA-DVQSIEAIRTELGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY ++ G+LG S + V E + RF AT L V ++ +T +GI +GVL Sbjct: 60 PLHEQYFAFLANAAQGNLGRSYATNRDVLETILERFPATALLAVSSLAISTVLGIAIGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AVK + D+ + AL G S P F+ G+++ + P+SG +S Sbjct: 120 SAVKPYTWLDNLFMLFALLGMSAPGFFAGLLIAWVFGFLLGWFPISGYIS---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + H++LP L PL++ R+TRS+ML+VL +DY+RTA Sbjct: 170 -------------------EGWQHLVLPMTTLALRPLSINARLTRSAMLDVLSQDYVRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ I HALRNA+ PV+T + + LLAG+ E IF+WPG+G IDA+Q+ Sbjct: 211 FAKGVSFRSAIFRHALRNALNPVLTAVSSWLAGLLAGSFFIEFIFNWPGIGLLAIDAIQK 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+P++QG VL A + I++N+ VD+LY +++PR++ Sbjct: 271 LDFPMIQGVVLFTAVIFIIINIAVDMLYALLDPRVKLS 308 >UniRef50_Q6ML30 Dipeptide transport system permease protein DppB n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML30_BDEBA Length = 323 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 192/339 (56%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIM-AGERGISPERHAQLLAELGLD 59 M FI RR+ + + ++ + F + ++PGDPV +M A I+ E A+L + GLD Sbjct: 1 MTTFITRRILQTLAVIVILSYVCFYLMSLMPGDPVDMMVASNPKITAEDVARLKSLYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P++++Y ++ ++ GDLG S R+PV E PR T L ++I + + IP+GV Sbjct: 61 QPVYKRYASWMGSILQGDLGYSRTYRVPVQELMGPRLWNTFLLSAISLILSIGIAIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++A+K GS D+ + G S+P FW ++LI+L +V + + P G + Sbjct: 121 ISALKPGSRTDYIVNLFSFGGISIPSFWLAIVLIILFAVKFPVLPAGGTQTIG------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + G + D ++ILP + L + R TRS+MLE + D+IRT Sbjct: 174 ---------ASDLGLWADIKDRSIYLILPVLSLSIQQIGRFSRFTRSAMLEAMRNDFIRT 224 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+R VI H RNA++P++T++ L L +GAILTET+F++ G+G+ + D++ Sbjct: 225 ARAKGLSRKTVIWQHGFRNALIPLITILALSFSGLFSGAILTETVFAYQGVGKLVYDSII 284 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V ++ +M++L+NL+ D++YG +PRI ++ Sbjct: 285 GNDYNVAMISFVISVSMVLLMNLVADIMYGFADPRISYQ 323 >UniRef50_A8I8E2 ABC transporter permease protein n=4 Tax=Proteobacteria RepID=A8I8E2_AZOC5 Length = 334 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 130/338 (38%), Positives = 203/338 (60%), Gaps = 17/338 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 +F RRL +P +GI + +F +H+ PGD V +MAGE G A+L A+ GLD+ Sbjct: 13 ARFFARRLLQAVPVLLGIVIFSFVILHLAPGDAVDVMAGEAGTGDAAYMAELRAKYGLDQ 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q L Y ++ DLG S+++ PV + + R TL L +++ + A+G+ G + Sbjct: 73 PLPVQLLRYGTQILQLDLGYSIRNNSPVRDLILQRLGPTLLLMSVSIVASVAMGVLFGAI 132 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++R ++ D +AL Y+MPIFW G+MLI+L SV + P G + Sbjct: 133 AAIRRNTLLDDLISLVALLAYAMPIFWIGLMLIILFSVTLGVLPSGGFMDVARQ------ 186 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +D H++LPA+ L A+ R+ R+SMLEV+G DYIRTA Sbjct: 187 ----------DVGPLARAVDIGRHLVLPALTLSLFYFAIYTRLMRASMLEVMGLDYIRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +V I H +RNA+LP+VT++G+Q+ +LL GA++ ET+F+WPG+GR DA+ + Sbjct: 237 RAKGLGAAKVTIRHVVRNALLPIVTMLGMQMASLLGGAVVVETVFNWPGIGRLTYDAVFQ 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ G +L+ + ++I +N+LVDL Y ++PRI+ + Sbjct: 297 RDYALLIGILLMSSALVIFINMLVDLAYSWLDPRIKAR 334 >UniRef50_B0PE95 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE95_9FIRM Length = 308 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 199/337 (59%), Gaps = 30/337 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I+RRL +IP +G+TL+ F V++IPGD ++AGE Q+ +GLDK Sbjct: 1 MPRYIVRRLLALIPVILGLTLVIFLLVNVIPGDTARLIAGEYA-DEATVEQIRTTMGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY +Y+ ++ GDLG S ++ PV EE + F T++L V + + VG+ +G+ Sbjct: 60 PILVQYGNYLLDLVQGDLGRSYQTHRPVLEEILTVFPKTIQLAVTTEVISIVVGLFLGMS 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RGS+FD + G S+P FW+ ++L ++++V + P SG Sbjct: 120 AAVRRGSLFDRGITMFGVLGLSIPQFWFALILQLVLAVKFGWLPPSGYQGGFDI------ 173 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++ILPAI LG ++ R++RS+ LEVL ++YIRTA Sbjct: 174 -----------------------YIILPAITLGIPSAGMMARISRSAFLEVLPQNYIRTA 210 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HAL+NA++PV++++G + LL G ++ E++FSWPG+G++ DAL Sbjct: 211 RAKGLREKSVIWKHALKNALIPVLSLVGTDMSRLLTGTMIVESVFSWPGIGKYGYDALFY 270 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +D P +Q VL++A I LVNL VD+LY +PR+R+ Sbjct: 271 KDMPALQATVLVLAVSICLVNLAVDVLYAAADPRVRY 307 >UniRef50_Q5SHU7 Peptide ABC transporter permease protein n=7 Tax=Bacteria RepID=Q5SHU7_THET8 Length = 336 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 126/340 (37%), Positives = 191/340 (56%), Gaps = 6/340 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE-RGISPERHAQLLAELGLD 59 M + +RRL +IP +++ +A + + PGDP+ + + ++ E+ L GLD Sbjct: 1 MFAYTVRRLLQMIPLLFAASVVIYALLALQPGDPLDELRRQNPRMTAEQFEALKRAYGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWE-EFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ +Y ++ + GDLG S IP E FV R TL L A+ A V IPVG Sbjct: 61 QPLHIRYFKWLNRALRGDLGYSRTYGIPAAEYVFVQRLPKTLILSGLALTLALVVAIPVG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V +AV++ S+ D+ L+ G+SMP+F+ G++L+ L ++ + P S F Sbjct: 121 VFSAVRQYSLADYAITFLSFVGFSMPVFFLGILLLYLFAI---VLPES-IPGFPRFPTGG 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 P + + + H++LP + L + +A R R+S+LEVL +DYIR Sbjct: 177 VPGVLWEDVRSGAVSLWEFLGQWAWHLVLPVLTLSALQMAEWTRFMRASLLEVLSQDYIR 236 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL V+ HALRNA++P+VT++GL + +L GA +TETIFS+PG+GR + DAL Sbjct: 237 TARAKGLAERVVLYKHALRNALIPIVTLVGLAIPGVLGGATITETIFSYPGMGRAIFDAL 296 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +DY V + +A M L NLL DL Y VV+PRIR+ Sbjct: 297 VEKDYNVAMAALAFLALMTALFNLLADLAYAVVDPRIRYS 336 >UniRef50_C6WWB7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWB7_METML Length = 340 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 30/352 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 M +++++R+ +IP IGI+L++F +H+ PGD A S E +L LD Sbjct: 1 MFKYLVKRVLWMIPMLIGISLISFFIMHLAPGDITNNEAAFNPKASEESRQKLREMYHLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRI-PVW------------EEFVPRFQATLELGVCA 106 KP+ QY ++ + D G S S PV+ TL + + Sbjct: 61 KPVIVQYGLWLKRMATLDFGNSFASHQKPVFWQTVDADGNVTEGMIQQALPITLMINLLG 120 Query: 107 MIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS 166 + + IP+G++AA K D + G+S+P FW ++L+ + V N P+S Sbjct: 121 LGITLLLAIPLGIIAARKYQGWQDRSITLFNFIGFSIPSFWLSLLLMYWLGVVHNWFPIS 180 Query: 167 GRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRS 226 G S D+ D+ +H+ LP ++ LA I ++ Sbjct: 181 GLHSLNYESMDT----------------WHKIKDSFSHLWLPVVIPSITGLAGITLFVKN 224 Query: 227 SMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFS 286 ML+VL +DYI TARAKGL +V+ HALRNA+LP++T++GL + L+ G+++ ETIF+ Sbjct: 225 GMLDVLQQDYITTARAKGLGERKVVYTHALRNALLPLITIVGLSIPGLIGGSVIAETIFA 284 Query: 287 WPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PG+G+ DA+ RD+PVV G + + + + ++ NLL D+ Y +PR+R Sbjct: 285 IPGMGKLFYDAVLMRDFPVVMGILTIGSALTLIGNLLADVAYAWADPRVRRG 336 >UniRef50_C0ZJM9 ABC transporter permease protein n=3 Tax=Firmicutes RepID=C0ZJM9_BREBN Length = 318 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 175/338 (51%), Gaps = 20/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + L+R+ + T G ++L F + PGD V ++ ER +L A GLDK Sbjct: 1 MTSYFLKRVFYMALTLFGASILIFFLYALTPGDFVDTSL---KLTAERKLELKAMYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++Y ++ + GD G S++ + PV + L + + F + I +GVL Sbjct: 58 PVVERYFIWMKNALQGDFGYSLQYQQPVMSLLNDYIWNSFLLAITSTFFTWLIAISIGVL 117 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++ S FD S+P+F+ G++ I L +V L P G + Sbjct: 118 SAARQHSWFDALVTIGVFAAMSLPVFFVGLLFIKLFAVDAKLFPAGGMMMIGSKETGLT- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D V HM LP VL + + + R R++MLEV+ +D++RTA Sbjct: 177 ----------------YAWDVVQHMFLPVTVLTLLSVGTLTRYFRTNMLEVIQQDFVRTA 220 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRNA+LP +T++G ++ L GAI+TE IF+WPG+G+ + A Sbjct: 221 RAKGLKEKVVLHKHALRNALLPAITLLGFELPALFGGAIITEKIFNWPGVGQLYMQAFSV 280 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G + +A + ++ NL DLLY V +PR+R K Sbjct: 281 RDYPLLMGFTMFLAILTVIGNLSADLLYRVADPRVRLK 318 >UniRef50_A4XIA7 Nickel-transporting ATPase n=21 Tax=Firmicutes RepID=A4XIA7_CALS8 Length = 323 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 35/338 (10%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++IL+RL + I +TF + MIPG P GE+ + + L + GL++P Sbjct: 19 ARYILKRLLWSAVSLFVIITVTFFLMRMIPGGPFT---GEKTLPEQILKNLNEKYGLNQP 75 Query: 62 MWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY+ Y+ ++HGDLGISM++ V E F + ++G+ A+I + VGIP+G+ Sbjct: 76 IGVQYVKYLKSLLHGDLGISMRNQGRTVNEIIAETFPVSAKIGIIAIIVSLLVGIPLGIW 135 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +AV +G DH ++ LA ++P F ++L+ + V L P+ G Sbjct: 136 SAVNQGKWQDHLSMVLATIFITIPGFVLAIILMYIFGVKLQLVPIMG------------- 182 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D ILP I L P++ I R+ RSSMLE L +DYIRTA Sbjct: 183 ------------------LDEPRSYILPVITLAAYPISFIARLIRSSMLESLSQDYIRTA 224 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ VI HAL+N+++PVVT +G + +L G+ + E IFS PG+GR+ +D++ Sbjct: 225 RAKGLSDFVVIYKHALKNSLIPVVTYLGPLIAGVLTGSFVVEKIFSIPGMGRFYVDSISN 284 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V G + A +I +NL+VD++Y ++PRI+ + Sbjct: 285 RDYSLVMGTTIFYAAFLIFMNLIVDIIYVFIDPRIKLE 322 >UniRef50_C9XN43 Oligopeptide ABC transporter, permease protein n=94 Tax=Firmicutes RepID=C9XN43_CLODC Length = 319 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 187/339 (55%), Gaps = 23/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ IL R+ ++IP I I++L+F + + PGDP +S + + +GLDK Sbjct: 1 MLKLILNRVKVLIPMLILISILSFGLLELAPGDPADAYI-NPLMSSQDIENIRVNMGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ +YL+++ + G+LGIS + +PV E+ + + T L ++IF+ V IP+G+ Sbjct: 60 PVYIRYLNWLKNTLSGNLGISYINHMPVTEQIMEKMGNTFILMGTSLIFSILVAIPLGIF 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV + SI + G S+P FW GM+LI + SV N+ P G + Sbjct: 120 LAVNKNSITSKVSSVFNYIGVSIPSFWIGMILISIFSVKLNIFPSGGMHTIGN------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + D V H++LP I LG A+ +S+ E L + Y+ TA Sbjct: 173 ---------------DSIGDLVKHLVLPVITLGLYNTAIFTNYVEASVNEQLKKQYVITA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ ++ H L+N++ +VT++G+ + L+ GA +TE +FSWPG+GR +ID++ Sbjct: 218 RAKGLSEKVILFKHVLKNSLTSLVTILGMSIQKLVTGAFVTEVVFSWPGMGRLMIDSIFS 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ +L A +IL NL+ D+LY +++P+I+ K Sbjct: 278 RDYTVIMAITMLSALFLILGNLVADILYLLIDPKIKSSK 316 >UniRef50_UPI0001C36066 binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36066 Length = 315 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 120/339 (35%), Positives = 186/339 (54%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I +R+ ++IP G+TLL F ++ GDP + G + E +L E GLD Sbjct: 1 MIKYIGKRILMMIPVMFGVTLLIFTLLYFANGDPARNLLGAEA-TEEEVQELRDEWGLDD 59 Query: 61 PMWQQYLHYIWGVMHGD-LGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P +Y +Y+ ++ LG+S ++ V E V RF+ + + V + I A G +GV Sbjct: 60 PYLVRYGNYLKQLLVDRSLGVSYVNKKEVSTEIVARFKVSFAIAVESTIIAVLFGTVMGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA + + D+ ++ AL G SMP FW G++L ++ ++ P SG + Sbjct: 120 LAATHQNTWVDNASMVAALVGASMPGFWIGLVLSIVFALKLGWLPSSGWGTFKES----- 174 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +LP I L + R TRSSMLEV+ +DYI T Sbjct: 175 --------------------------LLPCISLAIGAAGGLARQTRSSMLEVIRQDYIVT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKG+++ +V VHALRNA++PVVT G + L+ G ++TET+FS PGLG +++ A+ Sbjct: 209 AKAKGVSKFKVTYVHALRNALIPVVTAAGGTLSWLMGGVVVTETVFSIPGLGMYMVTAIN 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +RDYPV+QG VL +A LV L VD+LY ++PRI+ + Sbjct: 269 QRDYPVIQGSVLYIALTFSLVMLAVDILYAYIDPRIKAR 307 >UniRef50_C0Z5Q8 Oligopeptide ABC transporter permease protein n=3 Tax=Paenibacillaceae RepID=C0Z5Q8_BREBN Length = 323 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 122/339 (35%), Positives = 197/339 (58%), Gaps = 22/339 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++RR+ + IT+++F +H PG P+ +M + Q+ +GLD+ Sbjct: 1 MTEYLVRRVLQAVLVLFLITVVSFGLMHAAPGGPLKVMLSPGMSPEAQLIQM-KNMGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY+ ++ ++ GDLG + K+ +PV + P T L A + + IP G+ Sbjct: 60 PVYIQYMKWVGNLLQGDLGHTFKNNVPVGDILWPTVWNTFVLMSVAWGLSMLIAIPWGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + K+ + D A +A G++MP FW+G+ML ++ NL P+S + Sbjct: 120 NSTKQYGLSDQIASIVAYLGFAMPTFWFGIMLQQYFAMQLNLLPLSDMYT---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G++G D + H+ILP VL + +A V+ TR+SMLE L +DYIRTA Sbjct: 170 -----------MGKEGQISDLILHLILPVTVLTLVNIAAYVKYTRASMLEALEQDYIRTA 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ RVI HALRNA++PVVT+IGL + TL+AGA LTE++F+WPG+GR ++ Sbjct: 219 RAKGMKERRVIFRHALRNALIPVVTIIGLDLPTLVAGAALTESVFNWPGMGRLFVEMAVA 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R+Y V+ LL++ M+I+ NLL DL+Y +V+PR++ + Sbjct: 279 REYSVLMSITLLISLMVIIGNLLADLIYALVDPRVQLGR 317 >UniRef50_A6TTE0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTE0_ALKMQ Length = 323 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 117/338 (34%), Positives = 179/338 (52%), Gaps = 15/338 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RR+G++ + I + F +PGD + + PE G + Sbjct: 1 MLKYIARRVGIMTVMILLIATMIFFLFRAMPGD-ATAYIVDPSMPPEAREIARERYGFND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 W QY ++ ++ D G S PV R ATL L + AMIF+ +GI G Sbjct: 60 SKWVQYTIFMKDLVRLDFGNSYFYGRPVMSLIGERLPATLILMLTAMIFSYIIGIFGGAW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A KRGS + + +L S P FW G+M+I+L + P G + D Sbjct: 120 MAWKRGSKLESAGITFSLIFRSAPTFWVGLMMILLFAAKLRWVPAQGMRTSGYTGDTFAE 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +D + H+ILP++V G +A + + R+SMLEVL EDYI A Sbjct: 180 IFLN--------------LDFLRHLILPSLVAGLYFIATPLLIMRNSMLEVLSEDYIEMA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL ++ HA RNA+LPVVT L +G+ + G +L E +FSWPGLGR ++ A+ R Sbjct: 226 KAKGLKERTILYKHAARNALLPVVTAGALFIGSAIGGQVLIEYVFSWPGLGREIVQAVTR 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP+ QG ++++ M++++NL+ D+LY V++PRI +K Sbjct: 286 RDYPLAQGAFIIISAMLMMMNLVADILYAVLDPRISYK 323 >UniRef50_Q8YVG6 Permease protein of ABC transporter n=18 Tax=Bacteria RepID=Q8YVG6_ANASP Length = 335 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 192/339 (56%), Gaps = 19/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++ RL + IPT I I+L+ F + + PGDP+ A I+ E + LGLD+ Sbjct: 16 MNKYLINRLLVAIPTLIAISLVIFTILALAPGDPMGEFALNPSITAEVRENIKRSLGLDQ 75 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +Y+ ++ + GD+G S SR PV + + R TL + A + + IP+GV+ Sbjct: 76 PIHIRYIKWVIAFVRGDMGYSFTSRSPVIDLILQRLPTTLWVVGAAYLLGAILAIPLGVI 135 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+KR +I DH L G+S+P F+ G++ I++ S+ P Sbjct: 136 SALKRHTIIDHVLTTLVFFGFSLPTFFTGLLFIIIFSIQLKWLP---------------- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+ T + +FI + I+P VL A+++R RS +LE + +DY+RTA Sbjct: 180 ---FIYNSTLQVKDWQSFIAQIQQSIMPISVLALWQTAMLMRFVRSEILENIHQDYVRTA 236 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL++ VI H LRNA++PVVT+I L + ++ GA++TE +F PG+G LID++ + Sbjct: 237 YAKGLSKFVVIRRHILRNALIPVVTLIALDIPSVFTGALVTEKVFRVPGIGALLIDSIYK 296 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 D PVV + A +I++ NL+ D+LYG ++PR+++ K Sbjct: 297 NDTPVVMAITFIYAILIVIFNLVADILYGFLDPRVKYTK 335 >UniRef50_B3TCI4 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCI4_9ZZZZ Length = 321 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 130/340 (38%), Positives = 197/340 (57%), Gaps = 35/340 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA----GERGISPERHAQLLAELGL 58 +++ RR+ ++P ++ I+LL F + PGDP + GE +L ELGL Sbjct: 5 RYLARRVLYLVPVWLAISLLAFGLGALAPGDPAEAIYFETFGEPPNDELALEKLREELGL 64 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + P+ +Y +++ + GDLG S +S +PV + +TL L + +I A+ + P+G Sbjct: 65 NDPLPIRYGRWLFDAVRGDLGESYRSGMPVLPALISPLGSTLILALGGLIAASMIAFPLG 124 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +LAAVK S+ D A +L G ++P +W M I++ +V+ + PV+G S Sbjct: 125 ILAAVKHNSLIDVVARFFSLIGAAIPSYWLAYMFILVFAVYLHWLPVAGAGS-------- 176 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 H+ILP LG A++ R+ RSSMLEVLG DYIR Sbjct: 177 -----------------------WRHLILPCFTLGLSGAALLSRLLRSSMLEVLGYDYIR 213 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL+ +VI+ HALRNA++PVVTV+G G LL+GAI+ ET+F+ PGLGR +I+A+ Sbjct: 214 TARAKGLSERKVILQHALRNALIPVVTVMGNMFGLLLSGAIIVETVFARPGLGRLIIEAI 273 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+QG VL T+ +LV+L++DL Y ++P++R Sbjct: 274 SFRDYPVIQGFVLFTGTVFVLVSLIIDLSYTWIDPQVRLA 313 >UniRef50_B9YA13 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA13_9FIRM Length = 321 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 178/338 (52%), Gaps = 17/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I +R + + F + + PGDP+ IMAG + E L + GLDK Sbjct: 1 MKRYIGKRALSGLLVVLLSVCFNFTLIRLAPGDPIRIMAGTDNPNEEMIEALQQKYGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +Q++ ++ V GDLG S S V + + TL L + A++ + +G +G+ Sbjct: 61 SIPEQFVMFLGNVAKGDLGYSYISDESVIKLIGEKIGPTLALSLTAVLLSVTIGTLIGIY 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS FD ++ + P FW G+M+I++ + P SG V+ Sbjct: 121 AARKNGSKFDQFVCSISYVFDATPGFWLGLMMILIFASTLKWFPTSGMVNLRANYKG--- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D H++LP + R+ RSS+L+V+ ED+I T Sbjct: 178 --------------FAYFADVCRHLVLPITTMVLTQTPYYFRIARSSVLQVMSEDFITTF 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +A G+ R+ + LRNA+LP VTV+G+ + LL+G++L ET+F+WPG+GR + ++ + Sbjct: 224 KATGMKESRIFNKYVLRNAILPTVTVLGMSLAFLLSGSVLIETVFAWPGMGRLMFSSISK 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G L+ + +I + +LVD+LYG ++PRIR+ Sbjct: 284 RDYPVLTGIYLVTSVVICIAMILVDILYGFIDPRIRYD 321 >UniRef50_C5BVI8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVI8_BEUC1 Length = 361 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 131/337 (38%), Positives = 193/337 (57%), Gaps = 3/337 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKP 61 +F+LRRL + + +G+T +TF V ++PGD + E PE A A+ GLD+P Sbjct: 27 RFLLRRLVITVFLLLGVTAVTFLLVQLVPGDSMTATLSETALADPEVVAAYRAKWGLDEP 86 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY Y+ ++ GDLG+S ++ PV + + ATLE+ + AM+ + +G VG+ A Sbjct: 87 LLTQYGIYLSNLLQGDLGVSTQTGRPVLGDLLTYVPATLEIALPAMVLSVVIGTAVGLYA 146 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV++G D L G S P FW ++ + + + P GR+S + + Sbjct: 147 AVRQGRAGDQVVRVGTLLGLSTPPFWLSLVALYVFFYLLGVAPSGGRLSTYLSPPP--RV 204 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TG +D + G+ + DAV H++LP VL + +A +VR RS+MLEVL +DYI AR Sbjct: 205 TGMFTLDALLAGQWMVWWDAVQHLVLPVAVLTCLTVATLVRFVRSAMLEVLDQDYIAAAR 264 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V+ H LR ++PV+TV GL LL+G +L E IFSWPG+G++ A Sbjct: 265 AKGLPTSVVLRRHVLRAGLVPVITVSGLAFAALLSGTVLVEQIFSWPGVGQYAYRAASGL 324 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P V G L VA + +VNL+VDLLYGV++PRIR Sbjct: 325 DLPAVIGVGLFVAVVYTIVNLVVDLLYGVIDPRIRLS 361 >UniRef50_B1WR73 Permease protein of oligopeptide ABC transporter n=41 Tax=Cyanobacteria RepID=B1WR73_CYAA5 Length = 344 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 119/335 (35%), Positives = 185/335 (55%), Gaps = 4/335 (1%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I+ RL L I L F + PGDP + G R L LGL++P+W Sbjct: 13 YIVARLLLAPLMVWTIVTLVFLLLRATPGDPADAILGNRA-PEATKEALRESLGLNQPLW 71 Query: 64 QQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY Y+ ++ +LG S+ S VWE F AT+EL +M+ A A+G+ +G+L+A Sbjct: 72 LQYFAYLGQLLSFNLGTSITSQGQSVWEIIGQHFPATVELTFYSMVVAIAIGVTIGILSA 131 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + + D + YS+PIFW GM+ ++ +V P+ R T Sbjct: 132 SRPNTSVDVGGRLFGIITYSLPIFWVGMLFQLIFAVQLRWFPLGTRFPLNQTPPSGW--T 189 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G +D+ G G F+ AV ++ILP LG + + RM R ++ + L DY+ ARA Sbjct: 190 GIYTLDSLFSGNLGQFLTAVYYLILPCFTLGLLLSGIFERMVRVNLRQTLQADYVEAARA 249 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G+ R+++ HAL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ RD Sbjct: 250 RGIPERRILLAHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAIAVRD 309 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 YP VQG ++ ++++V++L+DL+ ++PRIR+ Sbjct: 310 YPTVQGIMVFFGAIVVVVSILIDLINAYIDPRIRY 344 >UniRef50_Q53191 Probable peptide ABC transporter permease protein y4tP n=41 Tax=Proteobacteria RepID=Y4TP_RHISN Length = 313 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 190/337 (56%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +ILRRL I + + F + + PGDP ++AG + + A + ELGL++ Sbjct: 1 MGVYILRRLVSTIAVMAMVGIFIFLLLRLAPGDPAAVIAGPTA-TEQMVANIREELGLNE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q++H+ V+ G+ G S+ + +PV + R + T+ L V MI + VG+ GVL Sbjct: 60 PLPVQFVHWASDVLRGNFGASVFTGVPVLQLLSQRLEPTISLSVLTMILSVTVGVSFGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + G D + GYS+P+F G +LI ++ PV G S + Sbjct: 120 AAWRSGGFVDRALATFSAIGYSVPVFVIGYILIYFFAIQTRWLPVQGYTSINQGVAP--- 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 H+ILP + L +A I R+TR SMLEVL EDY+RTA Sbjct: 177 --------------------WFLHLILPTVTLSVPYIAFIARITRGSMLEVLSEDYMRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG + ++ HAL+NA +P++TVIG+ ++ G +LTET+F+ PG+GR ++DA++ Sbjct: 217 AAKGASPFAMLFHHALKNAGVPILTVIGISFAYMIGGVVLTETVFNVPGIGRLVVDAIKN 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++Q ++L++ + +L+NLLVDL Y +++PRIR+ Sbjct: 277 RDYPIIQTVLVLISGLYVLINLLVDLAYTLIDPRIRY 313 >UniRef50_Q1ARP2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARP2_RUBXD Length = 334 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 130/334 (38%), Positives = 206/334 (61%), Gaps = 4/334 (1%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQ 64 +LRRL ++ T + + + F + ++PGD + + P++ AQ+ ELGLD+P+W+ Sbjct: 5 VLRRLAILPVTALLVATVVFFVLRVVPGD-ASDVLASQATDPDQRAQITQELGLDEPLWR 63 Query: 65 QYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVK 124 QYL ++ G+ DLGIS S PV E T+EL V +++ VG+ G++AA Sbjct: 64 QYLLFLSGMARLDLGISFYSGQPVVELLFETVPVTIELAVASVLVMVGVGVSTGMIAAAF 123 Query: 125 RGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGF 184 R + D A +A+ +SMP FW G++LI++ V+ P GR+ V D P T F Sbjct: 124 RNTWLDAAARFVAVVLFSMPWFWLGILLIVVFGVYLGWLPTFGRLPATVTYD---PTTNF 180 Query: 185 MLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKG 244 +L+D I G + + H+ILPA+ +G + ++TR+S +E + ED++RTAR KG Sbjct: 181 ILVDALIQGRPDLILPWLQHLILPAVTVGLTTAGFVTQITRTSFIETMFEDFVRTARMKG 240 Query: 245 LTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYP 304 ++ RV H RNA LP+VT++GLQ G LL GA+++E +FS+PG+GR +++A+ +RDYP Sbjct: 241 MSEFRVFWGHIFRNAALPIVTIVGLQFGALLGGAVVSEAVFSYPGVGRMMVNAIFQRDYP 300 Query: 305 VVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VVQG L++A++ ILVN L D+ Y ++PR+R Sbjct: 301 VVQGAALVIASLYILVNTLTDISYLYLDPRLRRS 334 >UniRef50_A1WN48 Binding-protein-dependent transport systems inner membrane component n=19 Tax=Bacteria RepID=A1WN48_VEREI Length = 317 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 127/335 (37%), Positives = 207/335 (61%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I R G ++ + +L F GDPV ++ G++ + A++ E GLDKP Sbjct: 6 LRYIAARAGGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQA-TAADIARVQKEYGLDKP 64 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ +++ V+ G+LG S+ + PV + R + T L + A+ A +G+P G+++ Sbjct: 65 LPVQFGYWLRAVLQGNLGTSIFLQRPVTQALWERAEPTTLLALMAVAIAALIGVPCGIVS 124 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV RG + D G+A+ G S+P FW G++LI + +V + PVSG + Sbjct: 125 AVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQVFAVSFGWFPVSGYGAPDAP------- 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 F++ + ++LPA VLG + A+I+R TR+SML+VLGEDY+RTAR Sbjct: 178 ----------------FMERLHALVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTAR 221 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL+ +V++ HALRNA++P+VTVIGL V ++ GA++TET+F PG+G ++ A+ RR Sbjct: 222 SKGLSESKVVLKHALRNALVPIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRR 281 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYPV+QG +L++A + +L+N +DLLY VV+PR++ Sbjct: 282 DYPVIQGALLVIAAIYVLINFSIDLLYAVVDPRVK 316 >UniRef50_C7P3N9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=C7P3N9_HALMD Length = 332 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 193/338 (57%), Gaps = 11/338 (3%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +++ +RRL IP +G+ +TFA + IPGDPV IM G S A + A GLD+P Sbjct: 4 VRYTVRRLLQAIPVLLGVVTITFALANAIPGDPVQIMLGPSP-SQSEIAAIRARYGLDQP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W +Y +Y+ ++ GDLG S+ + V + R AT+ L + + FA +P+GV++ Sbjct: 63 LWVRYANYVAALLAGDLGTSIYYDVAVTRKIGERLPATVLLMLSSYAFAILTAVPLGVIS 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +R + DH + ++L G S P FW G+MLI++ H NL P + V Sbjct: 123 AKRRNRLTDHVSRIVSLIGVSTPSFWIGLMLILVFGFHTNLLPTTNLVMPWADPAGIR-- 180 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 A H++LP I LGT+ +A I R+ RS ML+VL E+Y+ AR Sbjct: 181 --------GAETRLDVLAMAGQHLLLPMITLGTLQMAAITRIERSEMLDVLTEEYVTLAR 232 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G++ ++ HA RNA LPV+T+IGLQ+ + + GA+LTE +F G+GR ++D++ R+ Sbjct: 233 AYGISERTILRKHAFRNAQLPVITIIGLQLSSAIGGAVLTEVVFEINGMGRLIVDSIARQ 292 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 DYP++ G ++ A + ++ ++ DL Y V+PR+ + + Sbjct: 293 DYPLIMGTTIVFAFVFVVGVVVTDLSYAYVDPRVSYGE 330 >UniRef50_A8U4H5 Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT Length = 336 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 206/338 (60%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F LRR L++ +G+ L+TF H+ P DP + AG + + E GLD+ Sbjct: 1 MLRFTLRRAVLMVFMLLGLLLITFTISHIAPSDPAALAAGPDA-NVAMIERYRVEYGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++Q+ Y+ ++ G+ G S+ + VW++ V F T+EL +++ A A+G+P+GV+ Sbjct: 60 PLYEQFAIYLQRLLTGNWGKSIHTTRQVWDDLVSYFPNTVELVAFSILIAVALGVPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV + DH L ++G +MP+FW G+M + ++H P+ GR + D Sbjct: 120 AAVNQNRATDHIIRILTVSGVAMPMFWLGLMAQLYFALHLGWFPLGGR--IEMMTDPPEA 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +T +L+D+ + G+ G F + + H++LP++ L LA I+R+ R+ MLE L +DYI A Sbjct: 178 ITHLLLVDSLLRGQFGTFAEGLHHIVLPSVALCLPALASIIRVNRAEMLETLKQDYIVNA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL+ R++ ++AL+NAMLP + +IGL+ G +L G +L ET+F WPG+G + + A Sbjct: 238 RAHGLSTFRIVALYALKNAMLPTMAMIGLRFGWMLGGTVLVETVFDWPGIGLYAVQAAIS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+ + G +++ ++ N ++DL+YG+++PR+R + Sbjct: 298 SDFEPIMGATIVLGFFFMMTNFVIDLIYGILDPRVRTQ 335 >UniRef50_C7GGH7 Oligopeptide ABC transporter, permease protein AppB n=2 Tax=Clostridiales RepID=C7GGH7_9FIRM Length = 319 Score = 365 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 191/338 (56%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++R+ + IP +GIT++ +A + M G P+ ++ G R +S LGLDK Sbjct: 5 MTKYIIKRILIAIPVLLGITVIDYAIMCMA-GSPLEMLQGPR-VSEAAVQAKAIALGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++HG++G S+K+ PV TL L +++ + + +P G+ Sbjct: 63 PFYVQYFVWLGQLLHGNMGYSIKNYQPVAAMITSHLGPTLLLMGVSLLVSILLAVPAGIY 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+T V L+ G S+P F+ M+LI L +V P G + Sbjct: 123 SAIHQYSKGDYTVVTLSFLGSSIPGFFLAMLLIYLFTVKLGWLPSGGMTTL--------- 173 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D HM++P IVL +R RS++LE+L +DY+RTA Sbjct: 174 ------------GTSGGAADVAVHMVMPVIVLAVSMAGTNIRYIRSAVLEILQQDYLRTA 221 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ VI HALRNA++P+VTVIG+++ L G+I+ E +FSWPGLG + A+ Sbjct: 222 RAKGIGHFLVINKHALRNALVPIVTVIGMEIPVLFGGSIIVEQVFSWPGLGLMTMSAITN 281 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G LL A +++L NLL D+LY VV+P I+ + Sbjct: 282 RDYPVIMGVCLLSAIVVLLGNLLTDILYAVVDPTIKLQ 319 >UniRef50_A8RXZ6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RXZ6_9CLOT Length = 339 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 212/336 (63%), Gaps = 3/336 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-SPERHAQLLAELGLDK 60 L+FI +RL ++ G+ L F MIPGDP + +R + PE A A+ GLD+ Sbjct: 4 LKFIGKRLVYLVVMLFGVATLVFILTKMIPGDPTVANLSQRALNDPEIVAAYRAKYGLDQ 63 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ Y+ ++ DLG SM++ PV E + AT+EL + A++ A +G+ G++ Sbjct: 64 PLPVQYILYMKNLLQFDLGTSMRTNKPVLSELARCYPATIELALFAIVIAAILGVLFGII 123 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A++R SI D T +++TG S+P FW+ ++++ L P GR+S+ + Sbjct: 124 SAIRRNSILDQTVRAISVTGVSIPSFWFALLVLYFFYYKLKLFPGPGRLSNAFTAPAT-- 181 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG +ID+ + G +DA +H+ILP VL + +I R RS++L+V+ DYIRTA Sbjct: 182 VTGMYVIDSLLEGNIPKALDAASHLILPGTVLAAFTMGLITRTARSNLLDVMSTDYIRTA 241 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+R +II HAL NA++PV+TVIGL +G LL G +L ETIF+WPG+G++ +++ Sbjct: 242 KAKGLSRPGLIIRHALGNALIPVLTVIGLGLGNLLGGMVLVETIFNWPGVGQFAYESVLS 301 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+P + G LL+A +++N +VD+LYG+++PR+R Sbjct: 302 VDFPSIIGVALLIALNYMVINTVVDILYGIIDPRVR 337 >UniRef50_D1CEI4 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bacteria RepID=D1CEI4_THET1 Length = 307 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI+ RL +IP + +TF +H PG P + G + ISPE + GLDK Sbjct: 1 MLRFIVNRLLWMIPVLWLVGTVTFFLMHAAPGSPWDVRVGGKNISPELEKSFNRKYGLDK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QYL Y V+ D G S + V + + F + +G+ A + A +GI +G+ Sbjct: 61 PLVVQYLIYWRNVLKLDFGQSYSNESQTVVQRIMAGFPYSARIGLYAWVMALVLGISLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + D+ ++ A GY++P F G+ L+++ +V PV Sbjct: 121 IAALKQNTWIDYVSLFFATVGYTIPSFVLGIFLLIIFAVKLGWVPV-------------- 166 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ILP++ LG A I R+TR+S+LE++ +DYIRT Sbjct: 167 ------------------LFAGWKSYILPSVALGLSTAAFIARLTRASVLEIIRQDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL + + H +RNA++PVVT+ G + +L+ G I+ E +F+ PG+G I ++ Sbjct: 209 ARAKGLPPRIINLRHIVRNALIPVVTISGPALASLITGTIIIENVFNVPGMGYLFIQSIS 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G L I++ NLLVDL YG+V+PRI+ Sbjct: 269 ARDYPVIMGTTLFYTFFIVIGNLLVDLTYGLVDPRIKTS 307 >UniRef50_Q46ER9 Oligopeptide ABC transporter, permease protein n=2 Tax=Methanosarcina RepID=Q46ER9_METBF Length = 314 Score = 364 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 194/345 (56%), Gaps = 38/345 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG------ERGISPERHAQLLA 54 M +++L+R ++ T + LTF +HMIPG+ I+ E + E+ Q Sbjct: 1 MHRYLLKRFASMLITLVVACALTFFLMHMIPGETTEIILKHTFIGLEETATEEQLMQFSE 60 Query: 55 ELGLDKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAV 113 + L+ P++ Q+ ++ +++GD+G S PV R AT+ L +M+ + Sbjct: 61 KYNLNDPLYIQFFEWLKNFLLNGDIGTSYVYHKPVIYLLKLRLPATILLATSSMLITVVL 120 Query: 114 GIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMV 173 GI +GV +A+K+ + DH ++L G SMP FW G++LI+L SV L P + S Sbjct: 121 GISLGVYSALKQNKLSDHILRFISLFGVSMPGFWIGLLLILLFSVKLKLIPATDYGS--- 177 Query: 174 FLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 + ++ LPA+ L + +A ++R+TR+SMLE LG Sbjct: 178 ----------------------------LENLFLPALALSSHSIASVMRITRTSMLETLG 209 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 +DYI+ A AKGL+ +++ HA++NA+LPV+TV+G Q+G LL G+I+ E +F+WPG+G Sbjct: 210 QDYIKFAVAKGLSTRTIVLRHAMKNALLPVITVLGFQMGHLLGGSIVIEQVFTWPGIGSL 269 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L++++ RD PVVQG V+ + M +++N LVD+ Y ++ RI++ Sbjct: 270 LVNSISARDIPVVQGCVMCIVAMFLMINFLVDIFYTYLDARIKYD 314 >UniRef50_Q1GD19 Binding-protein-dependent transport systems inner membrane component n=141 Tax=Proteobacteria RepID=Q1GD19_SILST Length = 383 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 193/328 (58%), Gaps = 2/328 (0%) Query: 9 LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLH 68 + + TF+G+ +TF +IP DPV+ + G+R + E++ +GLD+P+ Q++ Sbjct: 58 VIVTFLTFVGLMAITFFIGRVIPIDPVLAVVGDRA-TQEQYDAARIAMGLDQPLVVQFIT 116 Query: 69 YIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSI 128 Y+ V GDLG S+ + PV E+ F ATLE+ +I +G+P+GV AA ++G+ Sbjct: 117 YVGDVFQGDLGHSVSTNRPVAEDLARVFPATLEMATLGIIIGVGMGVPLGVWAAARQGTW 176 Query: 129 FDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLID 188 D AL GYS+P FW G++ +++ GRV P TG +L+D Sbjct: 177 VDQLIRVFALLGYSVPAFWLGLVGLVVFYAGLGWVGGPGRVDIFYE-GLVEPRTGLLLVD 235 Query: 189 TAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRM 248 + I G+ F A+ H+ILPA +LG LA I RMTRS ML+ LG++YI TAR KG++ Sbjct: 236 SLIVGDWEVFWSALDHLILPATILGFFSLAYIARMTRSFMLDQLGQEYITTARVKGVSEW 295 Query: 249 RVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQG 308 RVI H R +P++TVIGL LL G+++ ET+FSWPG+G +L AL D V G Sbjct: 296 RVIWTHGFRPIRVPLITVIGLSYAALLEGSVMIETVFSWPGIGNYLTVALLNADMNAVLG 355 Query: 309 GVLLVATMIILVNLLVDLLYGVVNPRIR 336 L++ ++ IL+N L D+LY +++PR R Sbjct: 356 ATLVIGSVFILINKLSDVLYRILDPRSR 383 >UniRef50_C1A5Y8 Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5Y8_GEMAT Length = 306 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 145/338 (42%), Positives = 199/338 (58%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+LRR L IPT G+ ++ F +++ PGDPV M GER +L AEL LD Sbjct: 1 MTFFLLRRALLSIPTLFGVLVVVFLLLYVAPGDPVQAMVGERA-DAATIERLRAELRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ HY G++ GDLG S + P+ + RF TL+L AM+ AT +G+ +G L Sbjct: 60 PLPSQFAHYASGILTGDLGRSYITNRPIVTDIAERFPRTLQLAGAAMLLATLLGVSIGAL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+ FD A+ G S P++W G++LI+ +V P SG Sbjct: 120 AAVRPHGWFDRVALATTYLGISFPVYWIGLLLILFFAVTLRWFPASGYG----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + ++LPA+ LG+ +A + R+TRSSMLEVLG D++RTA Sbjct: 169 --------------------RLEFLVLPALALGSRSIAYLARVTRSSMLEVLGADFVRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V++ HALRNA++PVVTVIGL G L G+ILTETIFSWPG+GR+++ A+ R Sbjct: 209 RAKGLAERTVVVRHALRNALMPVVTVIGLDFGAYLTGSILTETIFSWPGIGRYVVMAISR 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P VQG VL ++ + +LVNLL DL YG ++PR R Sbjct: 269 RDLPAVQGTVLFLSVVFVLVNLLTDLAYGRIDPRARRA 306 >UniRef50_A8F7V7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F7V7_THELT Length = 317 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 205/338 (60%), Gaps = 24/338 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDK 60 +++RR+ IPT + + + F +H++PGD V +M G + ++ E+ +L + GLDK Sbjct: 3 FGYLIRRIITSIPTVLFVAFVVFIIIHLVPGDVVDMMLGTQNYLTQEQIQELYKQYGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q+ ++ ++ D G S++S V V RF TLEL + +M FAT +GIP+G++ Sbjct: 63 PLIVQFGVWLKNLVTLDFGTSLRSGKKVAALIVDRFPVTLELSILSMFFATIIGIPLGII 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K+ S D + L G S P FW G +LI++ + + + G V Sbjct: 123 AAIKKNSFTDGLVRVIGLVGLSSPSFWVGAILIVIFAGLFKGFNIFGYV----------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +F+ + M LP++ LG + A I+RMTRSSML+VL ++YI+TA Sbjct: 172 ------------RMQEDFLKNLQVMFLPSLTLGLMLSAQIMRMTRSSMLDVLQQEYIKTA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG++ ++I HAL+NA++P++T+ G+Q+G LLAG I+ E +F+ PGLGR L+ A+ Sbjct: 220 KAKGVSYSKLIGKHALKNALIPIITLSGIQLGYLLAGTIVIENMFALPGLGRLLLQAVNE 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+Q V+ +A +I+ +N++VD +Y +++PR+ K Sbjct: 280 RDYPVIQFVVMFIALIIVALNIVVDFIYTLIDPRVELK 317 >UniRef50_D1WR30 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Streptomyces RepID=D1WR30_9ACTO Length = 315 Score = 363 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 191/338 (56%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRR ++P +G+T+ TF +IPGD + G S L +LGLD+ Sbjct: 1 MLTFTLRRALHMLPVILGVTIATFGLGQIIPGDQASALLGPTA-SEADRQALREDLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +Y Y+ + GDLG S+ PV E R TL L A++ A VG+ +G Sbjct: 60 PAVSRYFTYLGSLFDGDLGRSLSFGRPVSEVLSDRLLNTLLLSGTAIVLAAVVGVAIGTW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K GS D + L S+P FW+G++LI++ S+ + P +G S Sbjct: 120 AAQKPGSHRDRSLTVGVLFFNSVPSFWFGLVLIIVFSLQLRMLPATGMTSIG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +D AHM+LP I L LAVI RMTRSS+LEV+G DY+RTA Sbjct: 172 --------------GGGALDVAAHMVLPVITLAAWSLAVIARMTRSSVLEVIGNDYVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R++G+ RVI+ H L NAM V+TVIGLQ G LL+GA+LTET+FSWPG+G L A+ Sbjct: 218 RSRGVGEFRVIVRHVLPNAMPSVITVIGLQAGFLLSGAVLTETVFSWPGIGLALHQAISA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD P+VQGG+L++A +L+N LVD+L NP+I+ Sbjct: 278 RDIPLVQGGILVIAIAFVLINFLVDVLQAYFNPKIKLA 315 >UniRef50_B9ZIL3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIL3_NATMA Length = 316 Score = 363 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 123/337 (36%), Positives = 180/337 (53%), Gaps = 24/337 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++ LRR +IP GI L F +H +PGDPV + G E L+A G D+P Sbjct: 4 LRYALRRFVQIIPVLFGIVTLMFVMMHALPGDPVRLYLGTEPG-QELADDLIASYGFDRP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QY Y+ + GDLG S PV + R + TL + + + A + I +G+ Sbjct: 63 LHEQYFDYLVRLGQGDLGQSFVYNRPVSDLIWERMEPTLVVMGLSYLVALPMAIGLGIYG 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + DH + L G S P FW +MLI +V+ H L P SG S + +S L Sbjct: 123 AARHNEAGDHASRFAGLAGISTPNFWLALMLIYVVTYHLELLPASGYTSPFIDPVESLTL 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +I+P I L T A+++RMTRSSM+E L DYI TAR Sbjct: 183 -----------------------LIMPVITLATAQTALLMRMTRSSMIEELRADYIETAR 219 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G+ +V+I H+ RNA+LP+VT++GLQV TLL G+++ E IF+ PGLGR D+L + Sbjct: 220 AYGIPERKVLIRHSFRNALLPLVTIVGLQVSTLLGGSVIVEEIFAIPGLGRLFFDSLIDQ 279 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY V G L +T+ ++ +L D+ Y ++PRI++ Sbjct: 280 DYSVAVGVTLFFSTLFLIGVVLTDIAYAYIDPRIKYD 316 >UniRef50_B8J041 Binding-protein-dependent transport systems inner membrane component n=11 Tax=Bacteria RepID=B8J041_DESDA Length = 344 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 180/337 (53%), Gaps = 18/337 (5%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMI-MAGERGISPERHAQLLAELGLDKPMW 63 + R+ ++ GITL++F +H+ PG P + +L A GLD+P+ Sbjct: 21 VARKTLWMLLVLWGITLISFWVIHLAPGSPTDMETTLNPLAGEAARQRLEALYGLDRPLH 80 Query: 64 QQYLHYIWGVMHGDLGISMK-SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY ++ ++H D G SM PV + + R T+ + V AM+ + IPVG+++A Sbjct: 81 VQYADWLLRLLHFDFGNSMSADSRPVLTKIMERLPLTVGMNVTAMVLTLLIAIPVGIISA 140 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +R S+ D + L G++MP FW ++L++L + P+SG S Sbjct: 141 CRRNSLLDRSVTVLVFLGFAMPSFWLALLLMLLFGIELQWLPISGLTSMHYEQLSL---- 196 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G F D H+ LP +V LA + R R+ MLEVL +DYI TARA Sbjct: 197 ------------WGKFCDLAKHLALPILVYTVGGLAGMSRYMRACMLEVLQQDYILTARA 244 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL +I HALRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ RD Sbjct: 245 KGLGEKAIIWRHALRNALLPVITLLGLSVPGLIGGSVIIESIFALPGLGQLFYAAVMARD 304 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 Y ++ G ++L A + + NLL D+ YG+ +PRIR K Sbjct: 305 YTMIMGNLVLGAVLTLFGNLLADICYGLADPRIRSAK 341 >UniRef50_B7AWH0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWH0_9BACE Length = 331 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+ +RL + T ++++ F HM GDP I+ G + E+ +L L LD+ Sbjct: 14 MAKFLGKRLLSALVTIFLLSIIIFTISHMSKGDPAQIILGAEA-TEEQITELRHSLKLDR 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QY+ +I+G + GDLG S + PV E R +L L + A I A V IP GV Sbjct: 73 PVVEQYIDWIFGAVRGDLGDSYYTGEPVLAEVASRLVPSLRLAIMAEILAVIVAIPAGVF 132 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA +G D+ +L G S+P F ++LI++ V + PVSG + Sbjct: 133 AAKNKGRGLDYMLSTTSLLGLSIPNFLMSLILILVFGVAFKALPVSGYRTLK-------- 184 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + + ILP + LG +++RMTRSSMLEV+ DYI+TA Sbjct: 185 ---------------SGVGVFLKYSILPVLALGLGQAGILMRMTRSSMLEVMNTDYIKTA 229 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG ++ HALRNA +P++T IG GTL AG + ETIF+ PG+G+ ++ ++ R Sbjct: 230 KAKGAKSTVILFKHALRNAFIPILTAIGQSFGTLFAGTAIVETIFNIPGVGQLVVTSITR 289 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY ++QG VL+++ M I++NL +D+LYGVV+PRIR K Sbjct: 290 RDYAMIQGVVLIISIMWIIINLALDILYGVVDPRIRLAK 328 >UniRef50_A4F975 ABC-transport protein, membrane component n=2 Tax=Actinomycetales RepID=A4F975_SACEN Length = 319 Score = 362 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 129/335 (38%), Positives = 195/335 (58%), Gaps = 24/335 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 + R+ + T + ++L+ FA + +PGDP + +AG Q+ GLD+P+ Sbjct: 5 YAFSRILQSLVTLVLVSLVVFAGLRALPGDPAVALAGPEA-DDAAIEQIRHSYGLDQPLP 63 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY ++ + GD G S + +P+ E + R TLEL V +++FA VG+ GV++AV Sbjct: 64 VQYATWLGRAVRGDFGESATTGLPIGEIILGRIPVTLELAVLSLLFAALVGLAAGVVSAV 123 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 +RG D GL+L G S+P FW G+M +++ +V + P SG V Sbjct: 124 RRGGPLDWLGNGLSLFGLSIPNFWLGLMCVLVFAVWLGVLPASGFVPFTESP-------- 175 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 + + M+LPA VLG+ AV++R RSSML+ LG DY+RTARAK Sbjct: 176 ---------------WENLERMVLPAFVLGSGLAAVLMRQMRSSMLDSLGSDYVRTARAK 220 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G RV+ VH LRN+++ V+T++GLQ+G L++GA++TE IF PG G+ ++D++ RD+ Sbjct: 221 GAGEWRVVGVHGLRNSLITVMTILGLQLGALISGAVVTEQIFVLPGFGKLMVDSVFTRDF 280 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PV+Q VL+ A I VNL VDLLY VV+PRIR + Sbjct: 281 PVIQAAVLVTAAGYIAVNLAVDLLYSVVDPRIRVR 315 >UniRef50_B9LRN3 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Halobacteriaceae RepID=B9LRN3_HALLT Length = 339 Score = 361 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 129/334 (38%), Positives = 199/334 (59%), Gaps = 2/334 (0%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +F+L+R + G+ F + PG+PV +A S E AQ+ A+LGLD+P+ Sbjct: 5 RFLLKRGIQGVLVVWGVVTAVFLLRFITPGNPVTFVAPLDA-SAELRAQIAADLGLDQPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 + QY+ YI G++ GD+G S R AT+EL V A I A + IP+GV++A Sbjct: 64 YIQYVDYIGGLLQGDMGYSYLRGTEASTIVFARVPATVELAVAATIVAIVIAIPLGVISA 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGR-VSDMVFLDDSNPL 181 +R D+ A +L G S P FW G+MLI+++SV ++L P S R + + Sbjct: 124 TRRREPADYGATLFSLVGISTPNFWLGIMLILVLSVQFDLFPTSRRPIGFFETFTFLVTV 183 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + + + H+ LPA+ LGT A++ R+TRS M+E LG+ Y+R AR Sbjct: 184 ENGLSVPMNVGAFLDGLRTWLWHITLPAVTLGTYFTALVTRLTRSGMIEELGQPYVRAAR 243 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL + HAL+N ++P+VTV+GLQ+GTL+ GA++TE +FSWPGLG +IDA+ R Sbjct: 244 AKGLPESLIQYKHALQNTLIPIVTVLGLQLGTLIGGAVITEAVFSWPGLGTLVIDAINVR 303 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 D+P++QG ++++ T +L+N+ VD LY +NPR+ Sbjct: 304 DWPLIQGSLIVIGTGFVLINIFVDSLYAYLNPRV 337 >UniRef50_C9RY28 Binding-protein-dependent transport systems inner membrane component n=211 Tax=Firmicutes RepID=C9RY28_GEOSY Length = 339 Score = 361 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 118/339 (34%), Positives = 186/339 (54%), Gaps = 35/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ L+R +I T I LTF + ++PG P+ + ++PE+ A +L E GLDK Sbjct: 31 MARYTLQRFVYMIITLFIIATLTFFLMKLLPGSPLQN---QEKLTPEQKALILKEYGLDK 87 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ Y+ ++ GDLG+S + PV E R + +LG A++F T VG+ +G+ Sbjct: 88 PVPVQYIQYLGNLLKGDLGVSFQYDNRPVTELISDRIGPSAQLGFQAIVFGTIVGLILGI 147 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA++ D+TA +A+ G S+P F G L ++V PV+ Sbjct: 148 VAAIRHNHWEDYTATVIAVLGASIPSFVLGGFLQYFIAVKLQWLPVA------------- 194 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 F + + ILP + L +A I R R+ MLEVL DYI T Sbjct: 195 ------------------FWEGFKYTILPTLALSVGVIASIARFMRTEMLEVLSSDYILT 236 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+++ VII HA+RN+++PV+T++G L+ G ++ E +F+ PGLG + +++ Sbjct: 237 ARAKGISQAGVIIKHAIRNSLIPVITILGPMTVNLMTGTLVIEKLFAVPGLGEQFVRSIE 296 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+ G L + ++IL +VD+LYGVV+PRIR Sbjct: 297 LNDYPVIMGTTLFYSALLILAVFIVDVLYGVVDPRIRLA 335 >UniRef50_C1D2F3 Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2F3_DEIDV Length = 314 Score = 361 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 135/338 (39%), Positives = 198/338 (58%), Gaps = 24/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F LRRL +PT + +TL+ FA V+++PGDP ++ GE +PE A+L LGLD+ Sbjct: 1 MLVFALRRLLSTLPTLLIVTLVVFAMVNLLPGDPARLLLGEEA-TPEALAELRRSLGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ +QYL ++ V+ D G S+K V + T++L +M+ A + IP G+L Sbjct: 60 PLPEQYLRWLMDVIQLDFGTSVKDNTTVTSLVAEKLPTTMQLAGFSMLIALVIAIPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A++RG+ D +AL+G S+P F+ G++LI + S+ P SG VS + Sbjct: 120 GALRRGTWVDQVLTLMALSGISLPNFFLGILLIYVFSIRLAWIPASGYVSFFEDPGKNLL 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L PA+ LG AV+ R R S++E L +DY+RTA Sbjct: 180 LLLL-----------------------PAVTLGVHSAAVLARYLRGSLIETLFQDYVRTA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKG++ RV HALRNA++PVVT GLQ+G LL GA++TE IFS PG GR L+DA+ Sbjct: 217 HAKGVSGPRVTFKHALRNALIPVVTAFGLQLGGLLGGAVITEQIFSVPGFGRLLVDAVFT 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QG VL+ A + +V+ LVD++Y ++PRIR++ Sbjct: 277 RDLPVIQGVVLVSAIAVFIVSFLVDMMYAALDPRIRYQ 314 >UniRef50_UPI0000E87C5E peptide ABC transporter, permease protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C5E Length = 339 Score = 361 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 30/352 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 ML+++++R+ + P IGI+L++F +H+ PGD + S E +L LD Sbjct: 1 MLKYLIKRILWMFPMLIGISLISFFIMHLAPGDVTSNESSFNPKASEESRQKLRELYNLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSR-IPVW------------EEFVPRFQATLELGVCA 106 KP+ QY ++ ++ D G S S PV TL + + Sbjct: 61 KPVMVQYGLWLKRIVKLDFGRSFSSHQRPVLWEEKDKNGNITKGLIQESLPITLLINLLG 120 Query: 107 MIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVS 166 + ++ I +G +A+K+ + D + G+++P FW ++L+ V P+S Sbjct: 121 IFIIFSISIVLGTASAIKQNTWVDRSITLFVFVGFAIPGFWLALLLMYWTGVANQWLPIS 180 Query: 167 GRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRS 226 G S D T +D + H++LP V LA I R+ Sbjct: 181 GLHSQGYLSLDLFSQT----------------LDLLKHLVLPVFVSSLSGLAGISLYVRN 224 Query: 227 SMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFS 286 ML+VL +D+I TAR+KGL+ RVI VHAL+NA+LP++T++GL + L+ G+++ E+IF+ Sbjct: 225 GMLDVLHQDFITTARSKGLSEKRVIFVHALKNAILPLITIVGLSIPGLIGGSVIAESIFA 284 Query: 287 WPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PG+G+ D++ RD+PV+ G + + + + + NLL DL Y +PR+R Sbjct: 285 IPGMGKLFYDSVLMRDFPVIMGILTIGSVLTLFGNLLADLGYAWADPRVRKG 336 >UniRef50_C8Q8F0 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pantoea sp. At-9b RepID=C8Q8F0_9ENTR Length = 306 Score = 361 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 195/338 (57%), Gaps = 32/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++ +++ + G++++ F + +PGDP +MAG E + LGLD+ Sbjct: 1 MKAYVAKKVLSLPLIIFGVSIIVFIAIRALPGDPARLMAGPEA-PQEAVDNMRIRLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ + +HG+LG+S++S+ PV E R TL L A + A A+G+P G+ Sbjct: 60 PLPLQYVKFAADALHGNLGMSLQSQRPVLTEISERLPYTLSLAALAYLLAIAIGVPAGMT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A+ R I D + L + G S+ FW ++ + +V P+ G Sbjct: 120 GAIYRQRIPDQVVMVLTIAGASIANFWLALLAMNYFAVQLGWLPLLG------------- 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D+ + I+P + L +P+A+I RMTRSSML+VL +DYIRTA Sbjct: 167 ------------------ADSWRNYIMPTVTLAILPMAMIARMTRSSMLDVLSQDYIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL+ + HALRNA++P+VT++ L G+L+ GA++TE++F+WPG+GR L+D+++ Sbjct: 209 KAKGLSARSIHWKHALRNALIPIVTIVALNFGSLIGGAVVTESVFNWPGIGRLLVDSVRY 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+QG L+ T ++L+NL+ ++L G++NP+IR Sbjct: 269 RDYPVIQGVTLVAVTGVVLMNLVGEILIGLLNPKIRFD 306 >UniRef50_B3TC47 Putative binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC47_9ZZZZ Length = 340 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 119/337 (35%), Positives = 195/337 (57%), Gaps = 6/337 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 ++ R+ + + ++TF +IP D + + AG + E ++ L +P+ Sbjct: 9 NYVFNRIIQLPIIIFALLIVTFTLSRIIPADVLWVWAGPFA-TKESKDAIIEYYHLAEPI 67 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 + Q+ +Y ++ DLG S + P+ E RF T++L A+ + G+ G+++A Sbjct: 68 YVQFWYYFQDLLRFDLGNSPITHRPITLELAIRFPRTIQLTFFALFLSVVGGLSFGIISA 127 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 + R + DH AL G SMP+FW+G++L + + + + P G +S +T Sbjct: 128 IYRNKLPDHFTRLFALAGLSMPLFWFGLLLQLFLHFKYPIFPAIGVLSGEAAPI----VT 183 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 F LID+ + G F DA H+ILP+ L +A+I R+TRS MLEVLG+DYIR AR+ Sbjct: 184 RFDLIDSLLAGRLDIFWDAFMHLILPSFCLSYPYMAIITRITRSEMLEVLGQDYIRAARS 243 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI-DALQRR 301 KGL+ ++ HALRN ++P +T+IG+ G LL G++L ET+F +PG+G +++ A+++ Sbjct: 244 KGLSDRIIMFRHALRNGIIPSLTLIGMTFGFLLGGSVLIETVFVYPGMGHYVVTQAIKQL 303 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYP + G L+ + ILVNL VDLLYG ++PRIR + Sbjct: 304 DYPAIMGVTLVAGLVFILVNLAVDLLYGYIDPRIRFR 340 >UniRef50_C7MR18 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=25 Tax=Actinomycetales RepID=C7MR18_SACVD Length = 341 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 137/341 (40%), Positives = 215/341 (63%), Gaps = 6/341 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++ RR+ ++ +++L FA++ +PG PV + G+RG + E AQL ELGLD+ Sbjct: 1 MLRYAFRRVLQLVLVLFVLSVLLFAWLRALPGGPVSALLGDRG-TAESRAQLREELGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISM--KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P++ QY ++ + G+ G S+ +P E F RF AT+EL A++ A IP+G Sbjct: 60 PIFVQYFSFLGRALTGNFGNSIGVAPGMPALEVFSERFPATIELSFMAIVLALITAIPLG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LAA +RG D+ + +L G S+PIF++ +L + ++ P GR + + Sbjct: 120 YLAARRRGGWLDNAGILSSLVGISVPIFFFAFLLKWIFAIELGWLPTGGRQTVGIDAT-- 177 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +TGF ++D + E DA+ H++LP+I L +IP AVI R+TR+S+L+VL EDY+R Sbjct: 178 -RVTGFFVLDGILTQEWDAAWDALVHLLLPSIALASIPFAVIFRITRASVLDVLDEDYVR 236 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TAR+KGL + + H LRN++LPVVT +GLQ G+LL+GA+LTET+F+W G+G L Sbjct: 237 TARSKGLAKRVIRDRHILRNSLLPVVTTVGLQTGSLLSGAVLTETVFAWHGIGEALALGF 296 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +R+D+PV+Q ++ A +L+NLLVDL Y +++PRIR + Sbjct: 297 ERKDFPVLQVVIIAGAASYVLINLLVDLSYALIDPRIRTAQ 337 >UniRef50_A8S2V4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S2V4_9CLOT Length = 310 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 181/337 (53%), Gaps = 33/337 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + + + +TF +H+IPG P + +R + + Q+ + GL+ Sbjct: 3 MAKYIIKRLVAGVLSLFILITITFFLMHVIPGGPFSP-SEQRNVPEKILEQISEKYGLND 61 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY+ Y+ ++HGD+G S K + V E F + ++G + A A GIP+G+ Sbjct: 62 PLPAQYVRYLGNLLHGDMGTSFKKQDTTVNELIANGFPVSAKVGALGIAVALAAGIPLGI 121 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AAVKRG + D ++ LA G S+P F ++++ + W + P G S Sbjct: 122 VAAVKRGKLADGASMVLATIGVSVPSFVLCVLMMYVFCEKWKIFPSYGLTS--------- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H +LP + +A I R+ RSSMLE + +DYIRT Sbjct: 173 ----------------------WKHYVLPVFCMAFSQVAYITRLMRSSMLETMRQDYIRT 210 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 R+KG+ VI +AL+N++LPVVT +G V TLL G + E +FS PGLGR+ I A+ Sbjct: 211 ERSKGVPEWEVISKYALKNSILPVVTYVGPLVATLLTGTFIIEKLFSIPGLGRYFISAIT 270 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDY V G + + MII NL+VD++Y V++PR++ Sbjct: 271 DRDYSVTLGLTVFLGVMIIGCNLIVDIMYAVIDPRVK 307 >UniRef50_D1CA61 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA61_SPHTD Length = 311 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 190/338 (56%), Gaps = 27/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +F+LRRL ++P G+T + F +H++PGDP IM G R +PE AQL LGLD+ Sbjct: 1 MSRFVLRRLIQMVPVVFGLTAVIFFMIHLVPGDPAAIMLGTRA-TPENVAQLRRNLGLDE 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ + G LG S+ R PV + + TL L ++ A + +P+ L Sbjct: 60 PLLVQYMFFLRNLATGSLGDSIFYREPVLDLILDHLPTTLMLATSTIMLAVIITVPLATL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+ R + D G L G +MP FW G+ L++L++V + + P G Sbjct: 120 AALHRDRLADQVVRGFLLVGLAMPSFWVGINLLLLLTVRYRIFPAGGFGD---------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F D + H+ LPA+ + AV+VR RSS+++ L D++RTA Sbjct: 170 ----------------GFFDHLRHLFLPALTIALSISAVLVRNLRSSLIDTLTADHVRTA 213 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+ V H LRN+ + VT++GL +G L+ G ++ E +F+ PGLG+ L+ ++ Sbjct: 214 RAKGLSSRAVFFWHVLRNSAMSTVTILGLNLGYLMGGTVIIEQVFALPGLGQLLLTSIFG 273 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG L+ A ++ILVNL+ DL+Y ++PR+ Sbjct: 274 RDYPVVQGITLVYAVLVILVNLITDLVYAALDPRVSLD 311 >UniRef50_Q8DPF3 ABC transporter membrane-spanning permease-oligopeptide transport n=6 Tax=Firmicutes RepID=Q8DPF3_STRR6 Length = 331 Score = 359 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 196/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 M ++IL+++ +IP + I+ L F + + P DP+ M S E+ +L +LGL+ Sbjct: 16 MKKYILKKVLFMIPMLLIISFLVFIALDLTPADPLTYMVSPDMASSAEQIEKLRQQLGLN 75 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +Y ++W ++HGD G S+ + P+ + AT EL ++I +T VGI +GV Sbjct: 76 DPVLVRYGRWLWQLLHGDFGYSIVNGNPISKIVGQALPATFELAFVSLIISTIVGIVIGV 135 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+ I D+ A LA+ G ++P F++G++++ ++ + P+ GR Sbjct: 136 ISAVKQNGIIDNVARFLAVIGTAIPQFFFGILILNFFAIQLRILPIGGRF---------- 185 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D FI+ V H+ILP + + +A ++R TR+SML+V DY++T Sbjct: 186 ------------ASGDFTFINRVEHLILPVMAMSIALVAALMRYTRNSMLDVFNADYVKT 233 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG+ +V H RNAM P++ ++ ++ L+ G+++ E++FSWPG+G ++ ++ Sbjct: 234 ARAKGVPEWKVYFKHIFRNAMRPILVLLIFRLPMLIGGSVIIESVFSWPGIGSIILSSVT 293 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+ L+++ +++ +LLVD++ +++PRIR+ Sbjct: 294 AGDYPVIMITTLMISVVVLFASLLVDIMAAILDPRIRY 331 >UniRef50_Q0K3A7 ABC-type transporter, permease component: PepT family n=4 Tax=Proteobacteria RepID=Q0K3A7_RALEH Length = 318 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 141/341 (41%), Positives = 210/341 (61%), Gaps = 26/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERH--AQLLAELGL 58 M ++LRRL +IPT + +L+ F V M+PGD V +M + IS + L+ LG+ Sbjct: 1 MSAYVLRRLLALIPTLLFASLIVFTIVRMVPGDVVDLMLSQNDISADTRTREDLVRALGM 60 Query: 59 DKPMWQQYLHYIWG-VMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 D+PMWQQY+H++ G V+ GDLG S+ PV R AT LGV A++ A +V +P+ Sbjct: 61 DRPMWQQYVHWVGGIVLRGDLGQSLWQGEPVLSMVTARIPATFSLGVIALVVALSVALPI 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GVL+A+++ S D+ A ++ ++P FW G M+++ SV W +P + V Sbjct: 121 GVLSAIRQDSAADYIARSFSILMLAIPSFWLGTMVMVFPSVWWGWSPEARYVPFHEDP-- 178 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + V +M++PAIVLG A+ +RMTR+ MLEVL +DYI Sbjct: 179 ---------------------VQHVRNMLIPAIVLGMALSAITMRMTRTMMLEVLRQDYI 217 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTA AKGL+ V++ HALRNA++PVVT+IGLQ L+ GA++ E IF+ PG+G L+DA Sbjct: 218 RTAWAKGLSERLVVLRHALRNALIPVVTLIGLQAPLLIGGAVIIEQIFALPGMGLLLLDA 277 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + +RDYPV+ G L+V ++L+NLLVDL YG+ +P++RH+ Sbjct: 278 VHQRDYPVITGVFLVVGVAVMLINLLVDLSYGLFDPKVRHR 318 >UniRef50_A3IB67 Dipeptide transport system permease protein dppB n=1 Tax=Bacillus sp. B14905 RepID=A3IB67_9BACI Length = 294 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 135/326 (41%), Positives = 204/326 (62%), Gaps = 32/326 (9%) Query: 12 VIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIW 71 ++ T IG+++L F +H+IPGDPV + G+ S E ++ LGLD+P++ QY+ YI Sbjct: 1 MVITLIGVSILVFLMMHLIPGDPVTYILGDFA-SEEAIVEMKKTLGLDQPLFIQYIDYIK 59 Query: 72 GVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDH 131 V+ G+LG S + + V EE V RF T++L + ++I +GI +G+LAAVK+ +IFD Sbjct: 60 NVLQGNLGTSYITGLTVGEEIVARFPITVQLALYSLIIGAVIGILMGILAAVKQNTIFDQ 119 Query: 132 TAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAI 191 A+ ++L G S P FW + LI + S +N+ P+SG Sbjct: 120 LAMVISLIGISAPGFWIALFLIWMFSYQFNIFPISGY----------------------- 156 Query: 192 WGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVI 251 +ILP+I LG I RMTRSSMLEV+ +D++RTA+AKGL + +I Sbjct: 157 --------QGFYSLILPSITLGLGSAGNIARMTRSSMLEVIKQDFMRTAQAKGLAMIPMI 208 Query: 252 IVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVL 311 HAL+NAM+PV+T+IGLQ G LLAGA++ ET+F+ PGLG + I+A+ +RD P VQG VL Sbjct: 209 FKHALQNAMIPVITLIGLQFGFLLAGAVVIETVFALPGLGSFSIEAITKRDLPTVQGLVL 268 Query: 312 LVATMIILVNLLVDLLYGVVNPRIRH 337 +A + I+ N++VDL+Y +++PRI++ Sbjct: 269 FMAFLFIITNMIVDLVYSLIDPRIKY 294 >UniRef50_Q30Y57 Oligopeptide ABC transporter, permease protein n=18 Tax=Bacteria RepID=Q30Y57_DESDG Length = 343 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 187/335 (55%), Gaps = 18/335 (5%) Query: 7 RRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDKPMWQQ 65 RRL V+ F GITL++FA +H+ PG P + + +L GLD+P+ Q Sbjct: 22 RRLLWVMAVFWGITLISFAVIHLAPGSPTDLQTTLNPQAGADARMRLEKLYGLDQPLHVQ 81 Query: 66 YLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVK 124 Y ++ ++ D G+SM PVW++ R T+ + + +M+ + +PVG+ +A Sbjct: 82 YGQWVNRLIRLDFGMSMSGDMRPVWDKISERLPLTVGMNLASMLLTLLIALPVGIASAYW 141 Query: 125 RGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGF 184 +G FD + L G++MP FW +++++L +H P+SG S Sbjct: 142 QGRWFDRASTVLVFIGFAMPGFWLALLMMLLFGIHLGWLPISGITS-------------- 187 Query: 185 MLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKG 244 +D A G +D AH+ +P + LA + R RSSMLEVL +DYI TARAKG Sbjct: 188 --LDYAQLSTTGKILDVAAHLAMPLFIYTFGSLAGMSRFMRSSMLEVLRQDYILTARAKG 245 Query: 245 LTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYP 304 L VI HALRNA+LPV+T++GL V L+ G+++ E+IF+ PGLG+ A+ RDYP Sbjct: 246 LGLGTVIFRHALRNALLPVITILGLSVPGLIGGSVIIESIFALPGLGQLFYGAVMARDYP 305 Query: 305 VVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ++ G ++L A + + NLL D+ YG+ +PRIR + Sbjct: 306 LIMGNLVLGAVLTLAGNLLADVCYGLADPRIRSAR 340 >UniRef50_B2SC63 Binding-protein-dependent transport systems inner membrane component n=34 Tax=Bacteria RepID=B2SC63_BRUA1 Length = 337 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 130/339 (38%), Positives = 206/339 (60%), Gaps = 3/339 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLD 59 M + +RL + +GI + FA + DP+ + E+ ++ PE A A+ GLD Sbjct: 1 MSNYFFKRLIAMPFLILGIVTIAFALTTITKCDPLTSIVAEQQMNNPEVVAAAKAKWGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 + + ++Y Y+ + GD+G S ++ PV + + R AT+EL V AMI + +GI +G+ Sbjct: 61 RSLPERYFIYLKNLAVGDMGTSFVTKRPVGTDLMARLPATMELVVVAMILGSVIGITLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA R S+ DH A AL G S+P+FW G+ ++ + SV + + P GR+ + + Sbjct: 121 LAAYYRDSVIDHLARLFALFGSSLPVFWLGLAVLFVFSVQFEILPGPGRLDPRMTPPAA- 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TGFM ID+ + G+ F DA+AH+ILP++VLG I R+ R++ML+V+G ++I T Sbjct: 180 -VTGFMTIDSLLAGDGAAFRDALAHLILPSLVLGWAVAGTISRLVRANMLDVIGREFILT 238 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG +RV+ HALRN ++PV+TVI L+ GA+LTETIF+WPGLG + ++A + Sbjct: 239 ARAKGAGELRVVFRHALRNILVPVLTVISYSFAYLITGAVLTETIFAWPGLGSYAVEAAR 298 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+P + G ++ M ++ NLL D+ Y + NPR+R Sbjct: 299 ALDFPAIIGVTIVGGIMFLMTNLLTDIAYVLANPRVRLG 337 >UniRef50_B1ZSA3 Nickel-transporting ATPase n=2 Tax=Verrucomicrobia RepID=B1ZSA3_OPITP Length = 305 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 124/339 (36%), Positives = 186/339 (54%), Gaps = 35/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI RRL IP + + TF + +PG P E+ ++PE L A GLD+ Sbjct: 1 MLRFIARRLFETIPVLLVLITATFFMIRFVPGGPFTA---EKAVTPEVLRNLEAHYGLDQ 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QYL Y+ ++HGDLG S K V E + +LELG +++ A +G+P+GV Sbjct: 58 PLHRQYLDYLRSLLHGDLGPSFKYPNRTVNEIIADKLPTSLELGAWSLLVALGIGLPLGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAAVKR + D+ A A+ G +P F G +L++L + SG + Sbjct: 118 LAAVKRNTWLDYLASSSAMIGICVPTFVMGPLLVLLFGIQLRWVNASGWYEPVDR----- 172 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +LP++VLG A I+R+TR MLEVL +DYIRT Sbjct: 173 --------------------------VLPSLVLGFFYAAYIMRLTRGGMLEVLHQDYIRT 206 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG + RVI HALR +LPVV+ +G + +L G+ + ETIF PGLGR +++ Sbjct: 207 ARAKGASEARVIFRHALRGGILPVVSFLGPAIAGILTGSFVIETIFQIPGLGREFVNSAF 266 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V G V+L A +++ +NL+VD++ +NP+++ + Sbjct: 267 NRDYTLVLGTVILYAVLVVAMNLVVDVVQVWLNPKLKFE 305 >UniRef50_UPI0001C31351 binding-protein-dependent transport systems inner membrane component n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31351 Length = 320 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 184/337 (54%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 ML F++RR I + ++L F + ++PGDP++ G +PE QL E GL+ Sbjct: 1 MLGFVIRRAATSILMLVAASVLVFVILRLLPGDPIITRLGATAGANPEAIDQLRREAGLE 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QQY ++ GV+ GD G S S+ V E R ATLEL A+ F+ + +P V Sbjct: 61 DPILQQYFDWVGGVLSGDFGQSYFSQFSVTELISRRIGATLELTGVAIFFSLLIAVPAAV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +++RGS FD + G ++P F G++LI++ +V P G V Sbjct: 121 FCSLRRGSWFDRLVTTGSTVGMALPQFLLGILLILVFAVELRWLPARGYVPFNEDP---- 176 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + V MILPA+ L +I+R R+SM+EVL YIRT Sbjct: 177 -------------------AENVKRMILPALTLAIAAAPLILRYLRASMIEVLDSSYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A KG+ RV++ HALRNA++P +T++G+ VG L G ++ E +F PGLG ++++ Sbjct: 218 AEGKGVPHRRVVVSHALRNALIPGLTMLGMIVGYTLGGVVIVEYVFGIPGLGSLAVESVF 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +RDY V+Q VLL++ + I L+VD+LYGV++PR+R Sbjct: 278 KRDYAVLQSVVLLISALFIFTTLVVDVLYGVLDPRLR 314 >UniRef50_B8F5L4 ABC-type oligopeptide transport system, periplasmic component n=16 Tax=Proteobacteria RepID=B8F5L4_HAEPS Length = 307 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 180/339 (53%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI++R+ IPT + +F + + PG P ER PE A + A+ L++ Sbjct: 1 MLKFIIKRILEAIPTLFILITFSFFLMRLAPGSPFT---SERAYPPEVIANIEAKYHLNE 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+++QY Y+ + GD G S K + V + F + +LG+ A FA +G+ G Sbjct: 58 PLYKQYFIYLENLAQGDFGPSFKYKDQTVNDLIASAFPVSFKLGIVAFCFAVTLGLLAGT 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ S +D+ + A+TG MP F + +L+++ +++ P G Sbjct: 118 VAALKQNSRWDYFIMSFAMTGIIMPSFVFAPLLVLIFAIYLKWLPAGGWN---------- 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + +M+LP + L +A I R+TR SM+EVL ++IRT Sbjct: 168 -------------------GGQLYYMVLPVLSLTIAYVAGIARITRGSMIEVLHSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL ++I HALR AMLPV++ + ++ G+++ E++F PG+G+ ++ Sbjct: 209 ARAKGLPMGKIIFKHALRPAMLPVISYLAPAFVGIITGSMVIESVFGLPGIGQLFVNGAL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V +LV T+ I N +VD+LY V++P+IR+ Sbjct: 269 NRDYSLVLSLTILVGTLTIFFNAVVDILYAVIDPKIRYS 307 >UniRef50_C0Q387 Oligopeptide permease ABC transporter membrane component n=9 Tax=Proteobacteria RepID=C0Q387_SALPC Length = 321 Score = 358 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 181/338 (53%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FILRR IPT + ++F + + PG P GER + PE A + A+ L+ Sbjct: 16 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GERALPPEVLANIEAKYHLND 72 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ + HGD G S K + V + F + +LG A + A +G+ GV Sbjct: 73 PIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGAAAFLLAVIIGVSAGV 132 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + +D+T +G A+TG +P F +L+M+ ++ P G Sbjct: 133 IAALKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQWLPGGGWN---------- 182 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A+ MILP + L +A I R+TR SM+EVL ++IRT Sbjct: 183 -------------------GGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 223 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R+I HAL+ A+LPV++ +G ++ G+++ ETI+ PG+G+ ++ Sbjct: 224 ARAKGLPMRRIIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 283 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V +LV + IL N +VD+LY V++P+IR+ Sbjct: 284 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 321 >UniRef50_A1UTK3 Dipeptide ABC transporter, permease protein n=11 Tax=Proteobacteria RepID=A1UTK3_BARBK Length = 357 Score = 358 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 190/331 (57%), Gaps = 2/331 (0%) Query: 6 LRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQ 65 L+ + + T +G+ +TF ++P DPV+ + G+ IS E + + +LGLD+P+ Q Sbjct: 29 LKLIISIFVTLLGLVTITFFIGRLLPLDPVIAVLGDN-ISQEAYDIMFHKLGLDQPLIVQ 87 Query: 66 YLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKR 125 Y +Y+ + D G S+ S V + + F ATLEL A+I +T+VGIP+GV AA+ R Sbjct: 88 YWNYLQNIFVFDFGDSLISGRSVLSDIIRVFPATLELATIAIIISTSVGIPLGVFAAMYR 147 Query: 126 GSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFM 185 S D+ L YS P FW G+M +++ GR+ + TGF Sbjct: 148 NSCIDYFVRIFTLISYSTPTFWLGLMALLVFYAKLGWIGGPGRIDFVYE-YSFEATTGFF 206 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 L DTA G+ F +A +H+I+PA++L +A I RM R M+E + ++YI TAR KGL Sbjct: 207 LWDTARQGQWEAFGNAFSHIIMPALILAFGGMAYISRMVRGFMIEQINQEYIITARVKGL 266 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 + R + HA RNA + +TV+GL LL GA+LTET+F+WPG GR+L +AL D Sbjct: 267 SWARTVWSHAFRNASVQTITVVGLSYAFLLEGAVLTETVFAWPGFGRYLTNALLAGDMNA 326 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 V G LLV + I +NLL DLLY + +PR R Sbjct: 327 VLGCTLLVGCLFISINLLSDLLYHIFDPRTR 357 >UniRef50_Q5E4F5 Oligopeptide transport system permease protein OppB n=88 Tax=Proteobacteria RepID=Q5E4F5_VIBF1 Length = 306 Score = 358 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 178/338 (52%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFI++R+ IPT + + ++F + PG+P ER + PE A + A+ GLDK Sbjct: 1 MFQFIIKRILEAIPTMLVLITISFFLMRFAPGNPFST---ERPLPPEVMANINAKYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+++QY Y+ ++ GD G S K + V E + ++G A IF +G+ VG Sbjct: 58 PVFEQYTTYLGNILQGDFGPSFKYQDYTVNELVEAALPVSAKVGFFAFIFTVVLGVTVGT 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+++ + D+T + A+ G MP F LI L S+ P G Sbjct: 118 LAALRQNTWLDYTIMSTAMVGVVMPSFVLAPALIYLFSIELGWFPAGGWHDGS------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +M LP + + + +A R+TR SM+E L ++IRT Sbjct: 171 ----------------------FKYMFLPILGMSFLYVATFARITRGSMIETLNSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +II HAL+ AMLPVV+ +G ++ G+++ ETIF PG+G+ ++A Sbjct: 209 ARAKGLSYRYIIIKHALKPAMLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAF 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V G +L+ + IL N +VD+L +++P+IR+ Sbjct: 269 NRDYSLVMGVTILIGFLFILFNAIVDVLLAIIDPKIRY 306 >UniRef50_Q97GJ1 Oligopeptide ABC-type transporter, permease n=1 Tax=Clostridium acetobutylicum RepID=Q97GJ1_CLOAB Length = 317 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 187/338 (55%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++I++RL +IP I + + + + PGD M ISP+ A++ + LD+ Sbjct: 1 MIRYIVKRLFFMIPIIIITSFIIYMIFTLAPGDIATSM----NISPKEKAEMRHKYHLDE 56 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P QY +++G HGDLG S K PV + L + I A + IP+G + Sbjct: 57 PKVIQYCKWLYGASHGDLGRSYKLNQPVKSVINKYIWNSFYLQFASFILAILIAIPIGAI 116 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+++ SIFD +L G SMP F+ G++L+ + N+ PV G + Sbjct: 117 SAIRKHSIFDSGFTVFSLVGISMPTFFLGLILMKWFAADLNIFPVEGMTATGENFHGIKR 176 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D + HM+LP VL + A ++R R+SMLEV+ +DYI TA Sbjct: 177 -----------------LLDILYHMVLPCAVLTIVNAATLIRYVRASMLEVINKDYIITA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKGL VI HAL+NAM+P+VT+ G+ + L GAI+TE IF WPG+G+ +DA+ + Sbjct: 220 KAKGLNEKVVIYKHALKNAMIPLVTIFGISIANLFTGAIVTEEIFGWPGIGKLSLDAVLQ 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++ G ++V + + NL D+LY V++PRI++K Sbjct: 280 RDYPLLMGINMIVVILTFVGNLAADVLYAVIDPRIKYK 317 >UniRef50_A1WJE8 Binding-protein-dependent transport systems inner membrane component n=18 Tax=Proteobacteria RepID=A1WJE8_VEREI Length = 315 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 195/336 (58%), Gaps = 24/336 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +I RRL +P + + ++ FA + + PGDP I+AG+ + + ++ +GLDK Sbjct: 4 LSYIGRRLLATLPVMLMVAVVVFAMLRLTPGDPAAILAGDDA-TGAQLEKVRQTMGLDKS 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ +M GDLG+S+ S PV + R TL L +C + V +P+GV+A Sbjct: 63 IPAQFASWMGQLMRGDLGVSLLSGTPVRQMIGIRMGPTLALALCTIALTIMVALPLGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A +RG D + L+ G+S+P F +LI L S+ PV G Sbjct: 123 ASQRGRWLDRLVMTLSALGFSVPTFVVAYLLIYLFSMKMGWFPVQGYKPLA--------- 173 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 ++LPA+ L I +A++ R+TRSS+LEV+GED+IRT R Sbjct: 174 --------------EGIWPFAQRLVLPALALSGIYIALVARITRSSILEVMGEDFIRTVR 219 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG +++ HALRNA + +VT+IG+ V +L+ G ++TE++F+ PGLGR +++A+ R Sbjct: 220 AKGAKDSTILLRHALRNAAVSIVTIIGIGVASLITGVVVTESVFNLPGLGRLVVEAVLAR 279 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYPV+QG +LL + IL+NLLVD+LY V++PRIR+ Sbjct: 280 DYPVIQGLILLFSFSYILINLLVDVLYTVLDPRIRY 315 >UniRef50_C1XNV7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNV7_MEIRU Length = 335 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 143/338 (42%), Positives = 213/338 (63%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML + RRL V+ G+T TF +++P DP + G+ E+ + GLDK Sbjct: 1 MLSYFFRRLFFVVFVVWGVTFATFFIANVVPIDPAIAALGDNAR-EEQIKEFRERYGLDK 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+WQQYL Y+ ++ GDLG S++++ PV E+ F ATLEL V A + +G+P G+L Sbjct: 60 PIWQQYLIYMGRLLSGDLGNSLRTQRPVAEDLKEFFPATLELSVAAFLVTLLLGVPAGIL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++ D T LAL G + P+F+ ++L +++ +L PV GR+ F Sbjct: 120 AALRQNKATDVTVRILALIGGATPVFFLAVLLQYVLARELDLLPVQGRLDGFTFPPP--R 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG M +D + + F+D++ H++LPA VLG A++ RMTR++MLEVL +DYIRTA Sbjct: 178 ITGLMGLDALLARDWAAFLDSLRHLVLPAFVLGLFSAAILARMTRATMLEVLSQDYIRTA 237 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ V+ HAL+NA LPV+T++G +G LL+GA+LTETIFSWPG+GR++ + Sbjct: 238 RAKGVPGRAVVFRHALKNASLPVLTLLGGLLGGLLSGAVLTETIFSWPGIGRYVTQSATS 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+P V G LLV + L+NL+VDLLY ++PRIR+ Sbjct: 298 LDFPAVMGVTLLVGLVYALINLIVDLLYAFLDPRIRYA 335 >UniRef50_Q211A7 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Rhodopseudomonas palustris RepID=Q211A7_RHOPB Length = 340 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 124/331 (37%), Positives = 188/331 (56%), Gaps = 18/331 (5%) Query: 9 LGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDKPMWQQYL 67 + + I F VH PGDP ++AG+ G + AQL AE GLDKP Q Sbjct: 24 FARFVAVVLVIATFNFVLVHAAPGDPAQVIAGQSGSADAKLLAQLRAEYGLDKPYPVQLA 83 Query: 68 HYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGS 127 Y+ ++ DLG S + + V R ATL L A A A G+ +G LA ++ G Sbjct: 84 TYLKRIVTLDLGYSYRQQRSVLSLLGERLPATLLLTCTAFFLALAAGVLLGTLAGMRAGK 143 Query: 128 IFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLI 187 D ++L Y+MP+FW G+ML++L SV + P G V+ V + Sbjct: 144 WSDTALTIVSLLLYAMPVFWLGLMLVLLFSVKLDWLPAFGYVTIGVEMTA---------- 193 Query: 188 DTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTR 247 D +H++LPA+ L + +A+ R+ RSS++E+ +D+I+TARAKGL + Sbjct: 194 -------FERMRDVASHLVLPAVSLAAVHMAIYARLMRSSVIELAHQDFIKTARAKGLKQ 246 Query: 248 MRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQ 307 R++ H LRNA+LPVVTV G+Q G L+ GA++ ET+F+WPGLGR DA+ +RDYPV+ Sbjct: 247 GRIVAHHILRNAILPVVTVAGMQAGALVGGAVVIETVFAWPGLGRLTYDAVLQRDYPVML 306 Query: 308 GGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 G L+++ ++IL+NL+ D +Y +V+PR+ + Sbjct: 307 GIFLMMSVIVILLNLVTDAIYRLVDPRVSLR 337 >UniRef50_A1SP55 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nocardioides sp. JS614 RepID=A1SP55_NOCSJ Length = 321 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 119/337 (35%), Positives = 185/337 (54%), Gaps = 25/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+ RL IP I I+++ F + + PGDP ++ G PE + E+ LD Sbjct: 1 MLRMATSRLLSSIPVLILISIVAFTLLRLAPGDPALLSVGLEA-PPEALERARQEMRLDD 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W QY ++ V+ D G S + PV E R TL+L A++F A+G+P+GV+ Sbjct: 60 PVWAQYWAWVTDVVRFDFGTSYTDKSPVTEVIAHRLPTTLQLAAVALLFIVAIGLPLGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW-NLTPVSGRVSDMVFLDDSN 179 +A++ D +L G S+P F + L++ + + P G VS Sbjct: 120 SALRANRFTDQLIRVGSLAGISVPNFVVALFLVLSFGWWFPGIMPYQGFVSLGEDP---- 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ++++ + +LPA+ L + ++ R+ RSSMLEVLG+DY+ Sbjct: 176 -------------------VESLKYTVLPAVALAAPQIGLVARLARSSMLEVLGQDYVSA 216 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA G+ +I LRNA+LPVVTV+G+Q G LL G+++ ET+F PGLGR L+++ Sbjct: 217 ARAMGVRERVIIWKDTLRNALLPVVTVLGVQAGFLLGGSVVVETVFGIPGLGRLLVESFT 276 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYPV G ++ +A + + +N++VDLLYGV+NPRIR Sbjct: 277 IRDYPVTIGVMMFIAAVFVFINIIVDLLYGVINPRIR 313 >UniRef50_D1C3Y0 Binding-protein-dependent transport systems inner membrane component n=3 Tax=Bacteria RepID=D1C3Y0_SPHTD Length = 315 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 207/338 (61%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+++LRRL +IP +GI+++TFA + +IPGD V ++ G ER +L GLD+ Sbjct: 1 MLRYVLRRLVALIPVLLGISIVTFALIRLIPGDVVDMILGTEVAGGERADELRRLFGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QYL + V+ GDLG SM++ PV +E + R T+EL +++FA + IP G++ Sbjct: 61 PLYKQYLLWAGDVVRGDLGHSMRTGKPVLDEILGRLPTTIELAAFSVVFALLIAIPAGII 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+K G+ + L L G S+P FW G +LI++ S + P + VS Sbjct: 121 AALKTGTRTEAGVQTLGLLGLSVPNFWLGTLLILVTSRYLGWFPAATYVSFTDDP----- 175 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + ILP I LG A+ +RMTRSS+LEVL +YI TA Sbjct: 176 ------------------WRNIQIFILPGIALGAALAAITMRMTRSSLLEVLNREYINTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ +VI+ HA++NAM+PVVTV+G+Q+G LL GAI+ E +F+ PG+GR IDA+Q+ Sbjct: 218 RAKGVAERQVILRHAMKNAMIPVVTVVGIQIGRLLGGAIIIEQVFNLPGIGRLAIDAIQQ 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG VL +++NLLVDLLY ++PRIR+ Sbjct: 278 RDYTMIQGVVLFTTFAFVVINLLVDLLYAFIDPRIRYS 315 >UniRef50_Q48E35 Peptide ABC transporter, permease protein n=8 Tax=Proteobacteria RepID=Q48E35_PSE14 Length = 315 Score = 356 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 112/333 (33%), Positives = 188/333 (56%), Gaps = 27/333 (8%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +FIL+R ++P GI+L+TF V IPGDP I+ G R +P+ A + A+ GLD+P+ Sbjct: 7 RFILQRPLQLLPVLFGISLVTFILVRSIPGDPARILLGARS-TPQALANIRAQYGLDEPL 65 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 W QY++++ ++ GD+G S+ +I V + V R + T+ L +++ A + +P+ +AA Sbjct: 66 WTQYVYFMKNLLQGDMGKSLLYKIDVLKLIVTRLEPTVFLVCGSVLLALLIAVPLATVAA 125 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 GS D+ TG MP FW G+MLI+L SV PVSG SD Sbjct: 126 RNNGSWGDNLIRVFTTTGLGMPAFWLGIMLILLFSVQLGWFPVSGYGSD----------- 174 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 ++D V HM+LP + + AV++R R+SML L D++ ARA Sbjct: 175 ---------------WLDKVHHMVLPCLTIALALSAVLIRNLRASMLMELQADHVTAARA 219 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G++ V H L N+++P + ++ + +G L++G ++ E++F+ PG+G+ L+ + RD Sbjct: 220 RGVSEGAVFRRHVLPNSLVPSINLLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFSRD 279 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 Y VVQG +++A ++VN L D+ ++PR+ Sbjct: 280 YMVVQGVAMVLACATVIVNFLADVATVAIDPRV 312 >UniRef50_Q73N80 Oligopeptide/dipeptide ABC transporter, permease protein n=5 Tax=Bacteria RepID=Q73N80_TREDE Length = 317 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 184/337 (54%), Gaps = 22/337 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+++++RL + IPTF+GIT T+ + M G P+ + I+ + LGLD+P Sbjct: 3 LKYVIKRLLIAIPTFLGITFFTYLILSMA-GSPLDAYLADPRITVMELERKRNSLGLDQP 61 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ + DLG S +S+ PV + R T L ++I + + IP+G+ + Sbjct: 62 IIIQYFIWLKNFFNMDLGFSFQSQRPVTQMIFERMGITALLAGSSLILSLLISIPLGIFS 121 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A K S DH + + + P F+ G++LI ++ L P G Sbjct: 122 ASKPNSFRDHASSAFSFILVATPNFFMGLILIYFCAIKLRLLPSGGLFD----------- 170 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + HMILP +VL + +R R SMLEVL EDYI TAR Sbjct: 171 ----------ASGKKTTLMLLKHMILPTLVLSFQQIGSWMRYMRGSMLEVLQEDYITTAR 220 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL R ++ HAL+N+++P++TV+G+ + +L+ GA++TE +F WPG+G ++ A+ + Sbjct: 221 AKGLKRNQIYYTHALKNSLIPIITVVGMSIPSLVGGAVVTEQVFGWPGIGTLMVQAINAK 280 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+ G + ++ +++ NL+ DL YG+V+PRI +K Sbjct: 281 DYPVIMGITVNISIAVLIANLITDLAYGLVDPRISYK 317 >UniRef50_B9L4I6 Oligopeptide transport system permease protein AppB n=2 Tax=Bacteria RepID=B9L4I6_THERP Length = 314 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 145/337 (43%), Positives = 220/337 (65%), Gaps = 23/337 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F++RR+ ++ ++G+T+L F+ +H+ PGDP MI+ G + + E A+L ELGLD+ Sbjct: 1 MVAFLIRRILGLVLVWLGVTILVFSIMHLAPGDPAMIILGPKA-TAESLARLRHELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ V+ GD G S++ + V E RF+AT L A + A A+G+ GV+ Sbjct: 60 PLPVQYLRWLGNVLQGDFGRSLQLKRDVSELLWTRFRATALLATAATVIAVAIGLTAGVV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A ++ S++D A+ LAL G+ +P+FW G++L + ++ + PVSG + Sbjct: 120 SATRQYSVWDRAAMLLALLGFCLPVFWLGLILQIGLAYRLPVFPVSGMNAPGQS------ 173 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+D + H++LPA+ LG P AVI RMTRSS+LEV+ +D++RTA Sbjct: 174 ----------------GFLDTLHHLVLPAVTLGIGPAAVIARMTRSSVLEVIRQDFVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ H LRNA++PV+T++GLQVG L GA+L E +FSWPGLG +++ + Sbjct: 218 RAKGLAERVVILRHVLRNALIPVLTIVGLQVGYLFGGAVLVEMVFSWPGLGLLMVNGILA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RD+PVVQG VL+VAT +LVNLLVD+LY +V+PR+R Sbjct: 278 RDFPVVQGAVLVVATTYVLVNLLVDVLYTLVDPRVRT 314 >UniRef50_A7NQN2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQN2_ROSCS Length = 316 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 137/339 (40%), Positives = 199/339 (58%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLD 59 M +++L+RL LVIPT G++L+ FA + ++PGD V I+ G + Q+ LGL+ Sbjct: 1 MNRYLLQRLALVIPTLAGVSLIIFALMRLLPGDVVDILFGGDTQADQRTLDQIRENLGLN 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QYL +I G + G+ G+SM++ IPV E TL+L V A+ FA IP+G+ Sbjct: 61 RPLAVQYLEWIGGFLSGNFGVSMRTGIPVAESIAQGMPVTLQLAVMAIFFACLFAIPLGI 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AAV+R + D + L G S P FW M +++ S + TP G VS + Sbjct: 121 IAAVRRNGVTDMLTRIVGLIGLSFPAFWLATMFLLISSTMFRWTPPLGWVSPFADFGRNM 180 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + + A+ P+A+I+RMTR+S+LEVL +DYIRT Sbjct: 181 QMMLAPALLLALQ-----------------------PMAIIMRMTRASLLEVLRQDYIRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKGL V++ HAL+NA +PV+TVIG+Q G L+ G+I+ E IFS PG+ LI+ + Sbjct: 218 AYAKGLRDRAVLLRHALQNAFIPVLTVIGVQFGVLMGGSIIIEQIFSLPGIAFLLINGIY 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQ VLL++ + +LVNL VDLLY V+PRIR+ Sbjct: 278 NRDYPVVQSTVLLLSLIFVLVNLAVDLLYSAVDPRIRYD 316 >UniRef50_Q65HR2 Oligopeptide ABC transporter (Permease) n=2 Tax=Bacillus RepID=Q65HR2_BACLD Length = 313 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 114/317 (35%), Positives = 180/317 (56%), Gaps = 33/317 (10%) Query: 25 AFVHMIPGDPVMIMAG--ERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISM 82 F+ PGDPV M + ++ E+ ELGLDKP++ QY ++ DLG S Sbjct: 24 VFMKAAPGDPVKQMLRVDDVAVTDEQIEAFREELGLDKPVYIQYWNWFKRFFQFDLGKSY 83 Query: 83 KSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYS 142 + PV +E +F ATL L +++ + +PVG L+A+ R DH + LAL G + Sbjct: 84 TTHEPVIDELSRKFPATLLLTGASLLVMLLIAVPVGTLSALYRDRWIDHLSRLLALVGAA 143 Query: 143 MPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAV 202 +P FW G++LI L SV N P G + Sbjct: 144 LPSFWLGLILIDLFSVRLNWLPSMGAGT-------------------------------F 172 Query: 203 AHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLP 262 H+ILP++ LG V VR+ RSS++E LG+D+IR+ARA+G++ R+ HA R+ ++P Sbjct: 173 KHLILPSLTLGIAMSGVYVRLVRSSLIESLGQDFIRSARARGISEARIFFFHAFRHCLVP 232 Query: 263 VVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNL 322 V+T+ G+ +G+LL G ++ E +F++PG+G+ ++DA+ +RDYP++QG +L + ++L+NL Sbjct: 233 VITIFGVSLGSLLGGTVIIEVLFAYPGVGKLVVDAIVQRDYPIIQGYILFMGIAVVLINL 292 Query: 323 LVDLLYGVVNPRIRHKK 339 LVDL Y +NP IR K+ Sbjct: 293 LVDLSYRYLNPEIRLKE 309 >UniRef50_C0G1A9 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=C0G1A9_NATMA Length = 326 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 177/336 (52%), Gaps = 14/336 (4%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 +++RR ++ TF L F M+PGDP + + G++PE+ Q +AELGL++P+ Sbjct: 5 AYVVRRCLQLVVTFWAFFTLLFVLFRMMPGDPTSMFIMD-GMTPEQREQRIAELGLNEPL 63 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY+ YI ++ GD G S PV RF T+ L A+IFA +GI G L Sbjct: 64 HVQYIEYIRQLLTGDFGQSFIYNDPVTSIIAVRFMNTIVLMATALIFAYVIGITFGALMG 123 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 R S F+ + + L S P FW G++L+ + P SG + L Sbjct: 124 WWRDSRFERGGIVVTLVARSSPEFWVGIVLLSVFVFWLGWFPSSGMRTTGGELGG----- 178 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 + + +D + H+ LPA+ LA + RS+ML+VL D+I +A Sbjct: 179 --------GFIDRYGSLDFLRHLFLPALTGAIAYLATPTLLMRSTMLDVLNADFIEIKKA 230 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +GL V+ HA RN++LP+VTV + GT + G+++ ET+F+WPG+GR ++ A+ D Sbjct: 231 EGLPERTVLYKHAARNSILPIVTVAAIATGTAMGGSVVIETVFNWPGMGREMVSAVNNND 290 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 YP+ L+ +++I++N + DL Y ++PR+ ++ Sbjct: 291 YPLAMAAFFLMGSVVIIMNFVADLAYVYLDPRVEYE 326 >UniRef50_D2RV85 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Halobacteriaceae RepID=D2RV85_9EURY Length = 316 Score = 354 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 136/342 (39%), Positives = 189/342 (55%), Gaps = 34/342 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISP---ERHAQLLAELG 57 ML+ L RLG + ++ +TF FV + PGDP + E+ SP A AE G Sbjct: 1 MLRAFLARLGSLAAVMATVSFVTFGFVSLTPGDPAYTILREQRQSPPSEREVAAFRAEHG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 D+P +YL ++ + GDLG S PV V TLEL + A A AV +P+ Sbjct: 61 FDEPFVVRYLSWLGDAVRGDLGTSYYQSEPVTSLLVEHLPNTLELALAATAVALAVAVPL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GV++AV RG+ D T AL G SMP FW G +LI++ S+ +TPVSG + Sbjct: 121 GVVSAVHRGTWIDRTGQIAALVGVSMPNFWLGYLLILVCSLRLGVTPVSGVGT------- 173 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 ++H++LPAI LGT A+I R+ R+SMLEVL +Y+ Sbjct: 174 ------------------------LSHLVLPAITLGTGMAAIITRLVRTSMLEVLEAEYV 209 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 AR+KG+ V+ HALRNA++PVVT++GLQ G +L GA++ E +F PGLG L+DA Sbjct: 210 TAARSKGVRERLVVYKHALRNALVPVVTIVGLQFGFVLNGAVVVEVVFQRPGLGTLLVDA 269 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + RDYP+VQG VL+ A ++ N LVDL Y ++PRI Sbjct: 270 IFARDYPIVQGVVLVTAFAFVVTNQLVDLAYVALDPRIERGS 311 >UniRef50_Q67T60 Oligopeptide ABC transporter permease protein n=2 Tax=Symbiobacterium thermophilum RepID=Q67T60_SYMTH Length = 328 Score = 354 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 120/342 (35%), Positives = 185/342 (54%), Gaps = 18/342 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG---ISPERHAQLLAELG 57 M +++ +R+ +IP I +TLL+F + + PG P ++ P++ +L + G Sbjct: 1 MARYLTKRILNMIPLLIIVTLLSFGIMQLAPGGPEYVILSAEADAMSDPQKVEELREKWG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L+ P+ QY+ ++ ++ GD G S R+PV E T+ L + A+IF + IP+ Sbjct: 61 LNDPIPVQYMRWVGNMLKGDFGKSYYYRLPVKEVLASALPNTIRLNLFALIFIYGISIPL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN-LTPVSGRVSDMVFLD 176 GV++AV++ S D A G + P FW +LI V++ L P +G + + L+ Sbjct: 121 GVISAVRQYSKADMLVTATAFAGQAAPSFWVASLLIWGVAMKSGGLIPTNGIATPGITLE 180 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 G F D +M+LP +V+ L + R RSSMLEVL EDY Sbjct: 181 T--------------HGWLTVFTDRAKYMLLPLVVIVFGGLTGLTRYMRSSMLEVLREDY 226 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 +RTARAKGL VI HALRNA+LP++ V G + L+ G+++ E IFSWPG+GR Sbjct: 227 VRTARAKGLAEKVVIYKHALRNALLPILAVSGGLLSGLVGGSVIIENIFSWPGIGRVAWQ 286 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ RDY V +LL A + ++ LLVD+ Y V+PRI++ Sbjct: 287 AVNNRDYNVSMSVMLLSAVLTMIGYLLVDIAYVWVDPRIKYD 328 >UniRef50_A9EE52 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EE52_9RHOB Length = 328 Score = 354 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 130/332 (39%), Positives = 184/332 (55%), Gaps = 18/332 (5%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE-RGISPERHAQLLAELGLDKPMW 63 I+ RL + + I LL F + + PGDP +MAG+ + QL ++ GLD+P+ Sbjct: 10 IVLRLAKAVAVILAIVLLNFILIRLAPGDPASVMAGQAGAADEKFMLQLRSQFGLDQPLP 69 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q YI G+ GDLG S + V E + R ATL L A A GI +G LA + Sbjct: 70 VQAWDYIAGIFQGDLGYSYRQGTAVSELILDRLPATLLLTGTAFAIALLGGIAMGSLAGL 129 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 G D ++L Y+ P+FW G+M I+L SV+ + P G L Sbjct: 130 NAGRPIDFVISVVSLIFYATPLFWVGLMSILLFSVYLDWLPAFGMTQVGSRLT------- 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 F+D H++LPA LG +AV RMTR+S+LEV +D++RTARA Sbjct: 183 ----------SWAYFLDVARHLVLPATTLGLFYMAVYARMTRASILEVRDQDFVRTARAM 232 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL R R++ H LRNA+LP++T+ G+Q G L+ GAILTET+F WPG+GR DAL +RDY Sbjct: 233 GLPRRRIVRSHILRNALLPIITLAGIQAGQLVGGAILTETVFGWPGIGRLAFDALLQRDY 292 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 V+ G + + M++ N++ DLLY V++PRI Sbjct: 293 QVLLGVFFVTSIMVVAFNIITDLLYRVIDPRI 324 >UniRef50_D0RFR0 Binding-protein-dependent transport system inner membrane component n=2 Tax=Brucella sp. F5/99 RepID=D0RFR0_9RHIZ Length = 340 Score = 354 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 181/342 (52%), Gaps = 21/342 (6%) Query: 16 FIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMH 75 + + +LTF + ++PGDP +++AG+ SPE ++ ELGLD+P Q ++W + H Sbjct: 1 MLIVAILTFLLMKLLPGDPAILIAGDGA-SPETVERIRVELGLDQPTVVQLGQWLWNLFH 59 Query: 76 GDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVG 135 DLG S PV + R T+ L + A VGI +GV+AA R S FD + Sbjct: 60 FDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVVAAYLRDSWFDTGVMS 119 Query: 136 LALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGED 195 LAL G S+P FW ++ ++L SV P +G V + A++ + Sbjct: 120 LALLGVSVPSFWLAILAVILFSVTLGWFPSAGYVPFLDSPLGWLRSLILPASILALF-QI 178 Query: 196 GNFIDAVAHMILPAI-------------------VLGTIPLAVIVRMTRSSMLEVLGEDY 236 G +L + +L + + RMTRS MLEV+ +DY Sbjct: 179 GYLARMTRSEMLEVMDQDYIRTARSKGVSEYSVSILALFQIGYLARMTRSEMLEVMDQDY 238 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTAR+KG++ V+ HA RNA++ V+TV G L+ G+++ E IF+ PGLGR L+ Sbjct: 239 IRTARSKGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQ 298 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ RD PVVQG +L + + + +N+LVD+LY + +PR+R+ Sbjct: 299 AILARDLPVVQGTMLFLGFLFVAINVLVDILYTIADPRVRYD 340 >UniRef50_A4J1I5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1I5_DESRM Length = 336 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 193/338 (57%), Gaps = 3/338 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M FIL+RLGL + +G+ +TF +IP DP G R +P++ ELGLD+ Sbjct: 1 MRSFILKRLGLGVLVLLGVITVTFFITRVIPSDPAAKWVGPRA-TPQQIEAARVELGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ Q+ Y+ + GD G S++S PV EE AT+EL V + I A VGIP+GVL Sbjct: 60 PLFIQFGKYVTDLSQGDFGKSLRSHQPVAEELKAYLPATIELVVLSTIIAIFVGIPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL-DDSN 179 +A ++ + DH + ++ S+P FW G+ L +L H P+ ++S + L + Sbjct: 120 SARRKDQLVDHFSRIFSVGAVSLPTFWVGLFLQLLFYRHLGFLPLGDQLSTDIKLLYEVP 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +TGF+L D+ I G D + HMILP I + PL ++ RMTRS++LE+L EDYI Sbjct: 180 HITGFLLFDSFITGNFVILQDVLIHMILPGITIALYPLGLVARMTRSALLEILNEDYISA 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR+ GL V+ +AL+N++ P VTV+ L +G L L E IFSWPG+G ++ A+ Sbjct: 240 ARSYGLPEGLVLWKYALKNSLGPTVTVVTLSIGYTLVNTFLIEAIFSWPGIGSYISSAVI 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYP + G + A + +NL+ D + ++PR+R Sbjct: 300 SLDYPAIMGVTIFSAIAYVFLNLVADFIIA-LDPRVRT 336 >UniRef50_C7H4F9 Oligopeptide ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4F9_9FIRM Length = 321 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 116/335 (34%), Positives = 185/335 (55%), Gaps = 24/335 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + I +R+ T + +TL FA + M+PGDPV G + E+ G D+P Sbjct: 11 AKMIGKRVVQSCITILLVTLFVFALIQMVPGDPVANYLGATA-TEEQITYYRHLYGFDRP 69 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QYL +I G+ G +G S+ + + + +PR TL + + A I T GI G++A Sbjct: 70 VIVQYLSWIGGLFRGTMGQSISYQSEIADIILPRLGTTLTMVIPAFIIGTITGILFGIIA 129 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RG D A G SMP+FW GMM +++ ++ + P SG V Sbjct: 130 AKNRGKTIDSVISFFANIGVSMPMFWLGMMGMLVFALKLRVLPSSGYVPITRD------- 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 F ++HMI+P IVL A VR+TRSSMLEV+ +DY+ TAR Sbjct: 183 ----------------FGGWLSHMIMPIIVLSLGVNAGFVRLTRSSMLEVMRQDYVTTAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+++ V H LRN+M+P+VT +G+++G+++ +L E++F PGLG +++ + R Sbjct: 227 AKGVSKKDVTFRHQLRNSMIPIVTTMGMRLGSMVGSTVLIESLFVIPGLGSVMMNGISNR 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D+ +V GVL+++ + + NL+VD+LYG+++PR R Sbjct: 287 DFMLVANGVLIISIFVAICNLVVDILYGIIDPRTR 321 >UniRef50_A4AFM8 Dipeptide ABC transporter, permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFM8_9ACTN Length = 338 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 132/339 (38%), Positives = 194/339 (57%), Gaps = 2/339 (0%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+F L+RL + + +TL+ F +IP +P ++ G + PE A++ AELGLD+ Sbjct: 1 MLRFTLKRLLTAVVVLLILTLVVFLMTRLIPSNPAIVYVGPKA-PPEVIARVTAELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P++ QY Y+ G+ GD G S+ ++ PV E R ATLEL AM A G+ +GVL Sbjct: 60 PIFVQYFEYLGGLFTGDWGNSLSTKRPVLLELATRLPATLELIAAAMAIAALGGVTLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF-LDDSN 179 A + G I D L++ G SMP FW G++L + + L P +G+ S+ + + Sbjct: 120 AVRRPGRILDGAIRFLSIGGVSMPAFWLGLLLQLFFVGNLKLLPATGQFSNALEYTNPIT 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 P+T F L D+ I G F D + H+ILPAI L PL ++ RM RS+MLEVLG+D+I T Sbjct: 180 PVTNFALFDSLITGNWAAFGDGLQHLILPAITLAAYPLGLMARMVRSAMLEVLGQDHIFT 239 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA GL V AL+NA+ VTV GL + L G E +F+WPG+G+++ A+ Sbjct: 240 ARAYGLPERVVHWKLALKNALPSTVTVFGLSIAYALTGTFFVEVVFNWPGIGQFITAAMV 299 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYP + LL A +L N +VD++ ++PR+R Sbjct: 300 AVDYPTIMAVTLLGAAAYLLSNFVVDVVQAKIDPRVRIS 338 >UniRef50_A7NQN7 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQN7_ROSCS Length = 307 Score = 353 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 142/338 (42%), Positives = 201/338 (59%), Gaps = 31/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++R+ L IP +GI +LTF VH+IPGD V M G+ +S ++ Q+ LGL+ Sbjct: 1 MSAYLIQRVLLTIPILLGIVILTFFLVHLIPGDAVSAMQGQLKMSAQQMEQMREALGLND 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q Y+ + GDLG S+ PV AT++L V AM A A+G P+G+L Sbjct: 61 PLHVQLGRYLMRLAQGDLGRSLFGNQPVALLIASNIGATIQLTVAAMAIAIALGAPLGIL 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRG+++D AV LA+ G S+P FW G+M+I L +V P+ S Sbjct: 121 AAVKRGTLWDVAAVVLAMIGVSIPSFWLGLMMIQLFAVTLGWLPIIEERS---------- 170 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +I+PA LG A+IVR+TR++M+E+L DY+RTA Sbjct: 171 ---------------------ARGLIMPAAALGLAEAAIIVRLTRATMVEILNADYVRTA 209 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL V+ HALRN +LP++T+IG+Q GTLL GA++ E +F+ GLG + A+ Sbjct: 210 RAKGLFDSVVLWRHALRNGLLPLITMIGMQFGTLLGGAVVIENVFARQGLGTLVTQAVIN 269 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PVVQG VL+ ATM +LVNL VD+ Y VV+PRIR+ Sbjct: 270 RDFPVVQGCVLVAATMYVLVNLAVDVFYTVVDPRIRYS 307 >UniRef50_O58538 323aa long hypothetical oligopeptide transport permease protein APPB n=1 Tax=Pyrococcus horikoshii RepID=O58538_PYRHO Length = 323 Score = 353 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 180/337 (53%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +I++R +I + L F ++ PG+P +MAGE + E + A GLDK Sbjct: 4 MKVYIIKRSIQLILVIFFVLFLNFIIINAAPGNPAQLMAGEYS-TEEYIKAIEARWGLDK 62 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ ++L Y+ ++HGDLG S + PV + + R TL L V ++I A VG+ + + Sbjct: 63 PIHIRFLIYMKNLLHGDLGYSYRYLEPVSKLIMERIGKTLLLTVPSIILAFLVGVWLARI 122 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K G D + + L YSMP FW G++LI++ V + P++G + Sbjct: 123 AARKPGGKLDVSLSIITLIFYSMPSFWLGLLLILVFGVKLGILPIAGMTNIR-------- 174 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + HM+LP L I + R+TR +++E EDY++T Sbjct: 175 --------AVYSSSWDKAFDILKHMVLPVTTLMLIQIPAYFRITRGAIIEQSTEDYVKTF 226 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A G ++ + + RNA+LP VT++GL++G +GA L E +F WPG+GR L+DA Sbjct: 227 DAVGFSKKHIFNKYIFRNAILPPVTILGLRLGYAFSGAALVEIVFGWPGMGRLLLDAAFA 286 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP++ G L++A + + + DLLY V++PRIR+ Sbjct: 287 RDYPLIMGIYLVIAVSVAVAIFITDLLYAVLDPRIRY 323 >UniRef50_C7RF10 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Bacteria RepID=C7RF10_ANAPD Length = 320 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 29/343 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI-----SPERHAQLLAE 55 M ++I++R+ +IP + I+++ FAF +PGDP+ M G E + L A Sbjct: 1 MFRYIVKRIINLIPVALIISIMLFAFSKAMPGDPIKAMMPTTGRMTKQEQEELYQTLQAR 60 Query: 56 LGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGI 115 GLDK + +QY+ ++ + GDLG S + R PV E + T+ L + + I + + + Sbjct: 61 YGLDKSLPEQYVRWLGRTLKGDLGESTRVRRPVSEYLSEPLKNTIFLNIGSTILSFVLSV 120 Query: 116 PVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL 175 +G+ +A +G +FD T L L G S+P+F+ G++LI + + P +G Sbjct: 121 LIGIRSATHKGGVFDKTFQTLTLVGLSIPVFFIGLILIFVFAFRLGWFPANGMP------ 174 Query: 176 DDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 + F + V +++LP L LA + R R+SML+ L +D Sbjct: 175 ------------------RENTFGEWVKYLVLPTATLTIGSLASLSRYVRNSMLDALDQD 216 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 YIRTAR+KGL VI HA RNA++PVVT + V + +G+ +TE IFS+ G+G LI Sbjct: 217 YIRTARSKGLKEKTVIYSHAFRNALIPVVTALTWAVLGMFSGSAITERIFSFRGIGNELI 276 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ +DY V+ + A + +L NLL+D+ Y +V+PR++ + Sbjct: 277 MAVMAQDYNVILALSMFYAVLTLLGNLLMDVAYALVDPRVQLE 319 >UniRef50_A9KKM2 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Clostridiales RepID=A9KKM2_CLOPH Length = 334 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 176/346 (50%), Gaps = 25/346 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVM----IMAGERGISPERHAQLLAEL 56 ML++ L+RL + I G++++ + V M+P D + + ++ E ++ Sbjct: 6 MLKYFLKRLAISIIILFGVSIIIYFIVRMMPADYIDQHTAAQVAQGQLTLEDVQRMKELY 65 Query: 57 GLDKP----MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATA 112 G+ + + Y +I + GD G+S PV + + + + AMI Sbjct: 66 GIGDNSIGGIIKSYGQWITKALRGDFGVSFVYGRPVHQVIAKYMWISFGISLAAMILNIL 125 Query: 113 VGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM 172 + IP+G++AA K+ D+ LA+ G S+P F+ G +L+ + S+ P+ G Sbjct: 126 ISIPLGIVAATKQYGAADYIVTVLAMIGISLPSFFLGALLLRVFSIGLGWFPLQGLSDA- 184 Query: 173 VFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVL 232 T I +D + H++LP L + + ++R TR++MLEVL Sbjct: 185 ----------------TQIITGFKQVLDKLHHLVLPMTTLVILNIGGLMRYTRTNMLEVL 228 Query: 233 GEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGR 292 DYIRTARAKGL+ VI HA RN ++P+VT++G + L GA+LTET+F+ PG+G Sbjct: 229 NSDYIRTARAKGLSEKSVIYKHAFRNTLIPIVTMLGGSLPGLFGGALLTETVFAIPGIGS 288 Query: 293 WLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 A+ + D P V G ++ +A + +L + D+ Y +V+PR++ + Sbjct: 289 TSYKAMLQGDIPFVMGYMMFIAVLTVLGTIFADISYAIVDPRVKLQ 334 >UniRef50_C8W528 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W528_DESAS Length = 316 Score = 352 bits (905), Expect = 8e-96, Method: Composition-based stats. Identities = 127/345 (36%), Positives = 192/345 (55%), Gaps = 37/345 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGD-PVMIM----AG-ERGISPERHAQLLA 54 M QF+ +RL I ++LTF +H+ PGD PV I+ G E+ + + Sbjct: 1 MWQFLFKRLAAAILVVAAASMLTFGILHLTPGDTPVTILKHAFIGIEQEPTDSEVTNITN 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 LD+P+ +QY +I + G+LG S R V + RF AT+ L + ++ + + Sbjct: 61 RYKLDEPLDKQYFSWIKEAVRGNLGESYVYRTSVAQIIGLRFPATVLLALVSVALSLLIA 120 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 IPVGV +A +R S+FDH + AL S+P FW ++LI++ S+ +L V+G Sbjct: 121 IPVGVFSAARRNSVFDHLSRLCALFAVSIPSFWLALLLIIVFSLQLDLFSVAGFRQISDV 180 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 +LP + + AV +RM RS MLE+L + Sbjct: 181 -------------------------------VLPCVTIAAGMSAVTMRMMRSCMLEILNQ 209 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYI TA+AKGL V+ HALRNA LPV+T++GLQ G +L G ++ ET+F+WPGLG+ L Sbjct: 210 DYILTAKAKGLHESVVVWRHALRNAFLPVITIVGLQFGHMLGGTVVVETVFAWPGLGKLL 269 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ID++ +D P+VQG ++L+AT +VNLLVDL Y +++PRIR+ + Sbjct: 270 IDSILAKDIPMVQGIIVLIATSYAVVNLLVDLAYVLMDPRIRYGR 314 >UniRef50_B6JJN3 Dipeptide transport system permease protein DppB n=3 Tax=Proteobacteria RepID=B6JJN3_OLICO Length = 317 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 25/340 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV--MIMAGERGISPERHAQLLAELGL 58 ML++ +RR L+IPT G+ +L F + +PGD V ++ ++PE A LGL Sbjct: 1 MLRYTIRRFLLMIPTLFGVAVLVFIMLRAMPGDIVEMRMLMDGGQVTPEALIVERARLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+W Q+ +I G+M GD G SM + PV +E R +LE+ + A I A + IP+G Sbjct: 61 DQPLWYQFYDWITGIMVGDFGTSMWTGRPVIDEISSRLGLSLEVAILATILAILISIPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 ++A+ + DH A+ G ++P FW GM++I+ + + +N P Sbjct: 121 TISALYNNTWIDHVIRTFAIAGLAIPSFWLGMLIILGLLLTFNWIPPLTYTPI------- 173 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + I ++ +I PA+ +G AV RMTRS++LEVL EDYIR Sbjct: 174 ----------------WEDPITNLSQLIWPALAVGYRYSAVATRMTRSTLLEVLQEDYIR 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ V+ HA+RNAMLPVVTVIGL+ L+ G ++TE +F+ G+G+ ++ + Sbjct: 218 TARAKGVYERLVLSRHAIRNAMLPVVTVIGLEFAFLIGGLVVTEQVFNLNGIGKLFVETV 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 R DY +VQ V+LVA I VN +VDLLY V++PRIR+ Sbjct: 278 TRADYTMVQALVMLVAAFFIAVNFVVDLLYAVLDPRIRYS 317 >UniRef50_B9JQI2 Inner membrane component of binding-protein-dependent transport system n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQI2_AGRRK Length = 348 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 119/329 (36%), Positives = 184/329 (55%), Gaps = 17/329 (5%) Query: 8 RLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPMWQQY 66 RL T + + +LTF V + PGDP +++AG++G S P A++ LG+D P+ Q Sbjct: 30 RLAKAAITLLAVIVLTFVLVRLAPGDPALLLAGDQGGSDPAFVAEIRQHLGVDGPIHLQL 89 Query: 67 LHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRG 126 HY+ V D G S + + PV + + R ATL L + A +F+ G+ +G LAA + G Sbjct: 90 WHYLQAVARLDFGTSYRDQRPVIDIVLERLPATLLLTISAFVFSIVTGVGLGALAARRPG 149 Query: 127 SIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFML 186 S D L++ ++MP+FW G++ I++ +V P G Sbjct: 150 SAIDSAVTTLSVAFFAMPMFWIGLIFIIVFAVKLGWLPSYGM----------------QA 193 Query: 187 IDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLT 246 A G F D AHM+LP + LG +++ R++R+++L++ D+IRTARAKGL Sbjct: 194 ASAAAKGGWAAFGDLAAHMVLPVLTLGLYYMSIHARVSRAALLQISDMDFIRTARAKGLP 253 Query: 247 RMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVV 306 V H LRNA+LP VTV LQ G L+ G+IL ET+F+WPG+GR D+L RDY V+ Sbjct: 254 AWLVWRDHLLRNALLPTVTVAALQAGQLIGGSILVETVFAWPGIGRLAFDSLASRDYNVL 313 Query: 307 QGGVLLVATMIILVNLLVDLLYGVVNPRI 335 +L + +++ NL+ D+ Y +++PRI Sbjct: 314 VAVFILSSFGVLIANLIADMAYRLIDPRI 342 >UniRef50_Q28NH1 Binding-protein-dependent transport systems inner membrane component n=56 Tax=Proteobacteria RepID=Q28NH1_JANSC Length = 338 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 124/339 (36%), Positives = 188/339 (55%), Gaps = 6/339 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML +ILRR+ I + + L+ FA + GDPV M G+ + E +L LGL+K Sbjct: 1 MLSYILRRVFQSILVLLVVGLVAFAMFRFV-GDPVDTMLGQER-TMEDVERLREVLGLNK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ + GD GIS + PV E R ATLEL + + + A GI +G+ Sbjct: 59 PFFLQYWDFLVRAVQGDFGISYRQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIF 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL-TPVSGRVSDMVFLDDSN 179 A++R + + + ++L G S+P F G++LI V ++ P Sbjct: 119 TAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDIRIP---FTDTTFNTGGMP 175 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + W D V +ILPAI LG + +I+R+ R+ MLEVL DYIR Sbjct: 176 TFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRF 235 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA+GL+ + HAL+N M+PV+TV GLQ+G+++A AI+TET+F WPG+G I+A+Q Sbjct: 236 ARARGLSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQ 295 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D PV+ ++L++ M + +NL VDLLY ++PR+R Sbjct: 296 FVDIPVMAAYLMLISVMFVGINLAVDLLYVAIDPRLRVD 334 >UniRef50_A9BP21 Binding-protein-dependent transport systems inner membrane component n=53 Tax=Proteobacteria RepID=A9BP21_DELAS Length = 355 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 20/335 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F+L+RL ++ T +G + + F + ++PG+ + G PE L +LGLD+ Sbjct: 36 MSIFLLKRLLMLAATLLGASAVVFGVLEVLPGNAAQTLMGPDAA-PEAVHALAVQLGLDQ 94 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P WQ+YL ++ G++HGD+G+S PV E + R T L V AM+ T + + G+ Sbjct: 95 PAWQRYLQWLQGLLHGDMGLSYAYSTPVSELVLERLAVTAPLAVMAMLITTVLALAAGIY 154 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + D +GLA G ++P FW+ ++LI++ SV G Sbjct: 155 AASRHNRWGDLGIMGLAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFPGWSEADGGGPL 214 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 L+ A I L + A++ R+TRS++LEVL ED++RTA Sbjct: 215 QALQALLLPA-------------------ISLAVVQAAILARITRSAVLEVLREDFVRTA 255 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL+R V+ H LRNAM+PV+TV+GLQ LLAG I+ E +F PGLGR + ++ Sbjct: 256 RAKGLSRRAVLWGHVLRNAMIPVLTVMGLQFAQLLAGTIVVENVFYLPGLGRLIFQSIAN 315 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RD VV+ VLL+A M++++N +VD+LY ++PRI Sbjct: 316 RDLIVVRNCVLLLAAMVVVINFIVDVLYAAIDPRI 350 >UniRef50_C0GIS4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIS4_9FIRM Length = 316 Score = 351 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 179/337 (53%), Gaps = 23/337 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +LRRL + +G+T+ TF +H PG P+ E + P + L LD+ Sbjct: 1 MTLLVLRRLAQTVIVLLGVTVATFFIMHSAPGHPLQA-NPELRLDPTAVERWLELRDLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY+ ++ ++ GD G S+ PV E R ATL L V + + A A + G+ Sbjct: 60 PLPAQYVSWVSRMLRGDFGNSLIYNRPVVELIAERLPATLLLTVSSFLLALATAVVCGIY 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+++GS+ D ++L G SMP FW GM+ IM+ S P G + Sbjct: 120 AAIRQGSLLDRLVGAVSLLGISMPGFWLGMLFIMVFSYRLAWLPGVGMRTPG-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 F+D VAHMI+P VL A VR R ++LE+L +D++R A Sbjct: 172 --------------GEGFLDLVAHMIMPVTVLAVAGFAHYVRYVRGAVLEILEQDFVRAA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA+GLT+ +++ H L NA +P+VTV L + L GA++ E +FSWPGLGRW+I + Sbjct: 218 RARGLTQKQILFRHILPNAAVPIVTVAALSIPMLFTGALVAENVFSWPGLGRWIITSTLA 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+ + A ++ L N L D+LY V++PR+R Sbjct: 278 RDYPVIMTVNMYTAMLVALANFLADVLYMVIDPRLRL 314 >UniRef50_B1MFX6 Probable dipeptide-transport integral membrane protein ABC transporter DppB n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MFX6_MYCA9 Length = 323 Score = 351 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 124/337 (36%), Positives = 190/337 (56%), Gaps = 31/337 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++I +RL L IP IG +LL ++ V+ +PGDP+ +AG+R +PE AQL L+ P Sbjct: 18 FRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPFTPEVMAQLRERFHLNDP 77 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +Y YI G +HGD G + + PV + R TL L V A+ F T +GI GVL Sbjct: 78 FLVRYGKYIVGFLHGDFGTDFQ-QRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLC 136 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV+RGS +D+ + SMP+F G + L P++G Sbjct: 137 AVRRGSFYDNLVLVTTTLLVSMPVFVLGFLAQYLFGFKLGWFPIAG-------------- 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D +LP +VL ++ +A + R+TR+SMLE + +++RTAR Sbjct: 183 ----------------IRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG++ R+++ H LRN+++PVVT IG VG LLAGA++TE++F+ PGLGR DA++ + Sbjct: 227 AKGISESRILLRHTLRNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQ 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + VV + L+ I NL+VD+LY +++PRIR++ Sbjct: 287 EGAVVVSILTLIVFFYIFFNLVVDILYALLDPRIRYE 323 >UniRef50_P0AFH4 Oligopeptide transport system permease protein oppB n=178 Tax=Bacteria RepID=OPPB_ECO57 Length = 306 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 116/338 (34%), Positives = 183/338 (54%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FILRR IPT + ++F + + PG P GER + PE A + A+ L+ Sbjct: 1 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GERTLPPEVMANIEAKYHLND 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRI-PVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ + HGD G S K + V + F + +LG A A +G+ GV Sbjct: 58 PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+K+ + +D+T +GLA+TG +P F +L+M+ ++ + P G Sbjct: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWN---------- 167 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A+ MILP + L +A I R+TR SM+EVL ++IRT Sbjct: 168 -------------------GGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R+I+ HAL+ A+LPV++ +G ++ G+++ ETI+ PG+G+ ++ Sbjct: 209 ARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +V +LV + IL N +VD+LY V++P+IR+ Sbjct: 269 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306 >UniRef50_C1DVB5 Oligopeptide transport system permease protein AppB n=6 Tax=Aquificales RepID=C1DVB5_SULAA Length = 328 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 17/339 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +IL+RL +IP +GIT L+F + M PGD + + IS +L GLD+ Sbjct: 1 MILYILKRLLQMIPLIVGITFLSFVIIQMAPGDYLDQLRMNPQISESTIEKLKQTYGLDQ 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ + DLG S +PV + R TL L + + + A + +P+G++ Sbjct: 61 PILIQYFKWLSNALLFDLGFSFSYNMPVLDLIKDRVPNTLFLSITSGLLAWLLAVPLGII 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA++ SI D + T S+P ++ L++ +V L P G S Sbjct: 121 AALRPNSIIDRFIQVFSFTFMSLPS-FFLAFLLLFFAVKTGLLPTGGATSPGYESMPF-- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +D + H+ LPA VL LA +VR+ RS+M+E L +Y+ A Sbjct: 178 --------------WEKVLDRLWHVSLPAFVLAITSLAGLVRLVRSAMIEALQSEYVLFA 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGLT +V++ HALRNA+ P +T++G ++ +LL+GA L E I +WPG+G ++DA+ Sbjct: 224 RAKGLTEKQVVLKHALRNALNPFITILGFEIASLLSGAALVEIIVNWPGMGMLMLDAVLS 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 +D +V GG+ + + M+I+ NL+ DLL ++PRIR ++ Sbjct: 284 QDLYLVMGGLYIGSIMLIIGNLIADLLLAKLDPRIRQRE 322 >UniRef50_B9ZIB5 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIB5_NATMA Length = 325 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 189/337 (56%), Gaps = 15/337 (4%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRR G ++ T I + FA M+PGDP + + + P++ L+ + GLD P Sbjct: 4 VNYALRRTGQLVLTIWAIATMLFAMFRMMPGDP-TVFLVDEQMDPDQRQALIEQYGLDAP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +QY+ ++ ++ DLG+S SR PV + TL L + A++ A G+ GV+A Sbjct: 63 LHEQYIEFMIQIVTLDLGLSFHSRRPVRDVIAIYLPNTLILMLTALVLAYIFGVTFGVIA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RGS + V LAL S P FW G++++ + + ++ P+SG S + + Sbjct: 123 AWARGSGREKLLVVLALVQRSFPSFWVGLVVLWIFGAYMDVIPMSGMTSREHRPESFFMM 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + D + H+I PA VL + + + R++MLEVL ED+I R Sbjct: 183 ITSI--------------DFLWHLIAPASVLAFYSMGYPLLLMRNNMLEVLTEDFIDVCR 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +V+ HA RNA+LPVVT + VG + G++L ET+F WPG+GR +++A+ RR Sbjct: 229 AKGLSERKVMFKHAARNALLPVVTAGAVAVGYAVGGSVLIETVFGWPGIGREMVNAVLRR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV QG +L+A+ ++ +N DLLY ++PR+ + Sbjct: 289 DYPVAQGTFILLASTVVFMNFFADLLYSWLDPRVTYD 325 >UniRef50_Q89VQ3 Peptide ABC transporter permease protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VQ3_BRAJA Length = 315 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 131/338 (38%), Positives = 207/338 (61%), Gaps = 26/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLD 59 M +++RRL L++ T GI+++ F + ++PG+ V I+ G + P A L ELG+D Sbjct: 1 MFAYLVRRLFLMLVTLFGISVVIFFLLRIVPGNIVDILFAAAGYVDPADKANLEKELGID 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY H+I G + GD G S S P +E +PR T L A++F+ ++GIP+GV Sbjct: 61 QPLVVQYWHWISGFLRGDFGYSYVSEKPALQEILPRIPITARLAGLALLFSASIGIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 ++AVK+G+ D+ ++L+G S+P FW G++++ + P Sbjct: 121 ISAVKQGTRLDYALRVVSLSGLSLPSFWLGLLVLTASVAMFGQMP--------------- 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +F +AVA +PA+V+G A+ +R+TRSSMLEVL +DYIRT Sbjct: 166 ----------LFNPNPQSFGEAVATYCIPAMVVGFRSSALTMRITRSSMLEVLRQDYIRT 215 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG + V HAL+NA+LPV+TVIG++ L+ G I+TET+F+ PG+ R+L++A++ Sbjct: 216 ARAKGASDAAVNYQHALKNAILPVITVIGIEAAFLIGGLIVTETVFNIPGVARFLVEAIR 275 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYP+VQ V+L+A +++ N +VD+LY V +PRIR+ Sbjct: 276 WRDYPIVQNLVMLIAVVVVSANFIVDMLYAVFDPRIRY 313 >UniRef50_A8Z099 Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein n=47 Tax=Bacillales RepID=A8Z099_STAAT Length = 320 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 100/336 (29%), Positives = 175/336 (52%), Gaps = 18/336 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M++ IL+RLGL+IP I I+++ F+ + PGDP I E +LGL+ Sbjct: 1 MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSD-LQNGKIKQEAINAQREKLGLND 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY+ ++ V+HGDLG S+K + PV + R T+ LG ++I + +G+ Sbjct: 60 SIPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGIT 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + S+ D+T ++P F G+ I + S P G V Sbjct: 120 SGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDIN-------- 171 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G ++ + H LPA LG + A ++ R+ ++E +DY+ TA Sbjct: 172 ---------LKEGTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTA 222 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL+ ++ H LRN+++P++T +G + ++L GA++TETIFS+ G+G+ ++++ Sbjct: 223 RSKGLSMNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIG 282 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 +DYP++ L + + +L NL+ D+ YG ++PRIR Sbjct: 283 QDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIR 318 >UniRef50_B8D511 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D511_DESK1 Length = 324 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 121/336 (36%), Positives = 192/336 (57%), Gaps = 17/336 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 F+ RR + + + ++F ++PGDP+ +M + ++ ++ A L + GL+KP Sbjct: 6 TTFLTRRAFSSVLSIFILLSISFILFRLLPGDPISLMFRDPRLTQDQLAYLREKFGLNKP 65 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W+QY Y+W + GDLGIS + PV E + R TL L + A I + +G+ GV++ Sbjct: 66 LWEQYFIYLWNTVRGDLGISFYYKQPVTEILLERIVNTLMLLIPATIVSILLGVLTGVVS 125 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + GS+ D G AL Y++P +W G +LI+ + + PV+G V Sbjct: 126 AWRHGSLVDKVVSGSALVLYTLPTYWLGGLLILASINYLH-LPVTGMRDYGVHYS----- 179 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + D +HMILP I L + + R+SML+VLGEDYIRT Sbjct: 180 -----------SMLEHLYDLASHMILPFITLVLVNYGGFTLLVRASMLDVLGEDYIRTYY 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G R++ + L+NAMLP +T I + + T ++GA+LTETIF+WPG+GR + +A+ R Sbjct: 229 AVGFREGRILFKYGLKNAMLPTLTAISIAIATSVSGAVLTETIFAWPGIGRLIYEAVYNR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYP++QG L++A ++L NL+ DLLYG+++PR+R Sbjct: 289 DYPLLQGAFLVIAVSVVLANLIADLLYGLIDPRVRT 324 >UniRef50_C7MV56 ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=11 Tax=Actinomycetales RepID=C7MV56_SACVD Length = 348 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 196/337 (58%), Gaps = 20/337 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++F+ +LG + +F + +L F MIPGDPV M +R SPE+ A+L LG+DKP Sbjct: 32 VRFLASKLGGALASFSLVVVLGFLLFRMIPGDPVATMTRDRPTSPEQLAELRERLGVDKP 91 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 M +Q++ Y+ G++ GDLG S PV + R TL L A + A A+G+ +GV A Sbjct: 92 MHEQFIDYVLGLLRGDLGTSYMYNRPVADMIGERLWPTLLLVGTATLLAVALGLWLGVRA 151 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + GS FD + G+ALT +SMP FW G++L++ L P G S ++ + Sbjct: 152 AWRHGSAFDRVSTGVALTLWSMPQFWLGLLLLI---ATQGLFPSRGMRSPVIPENPV--- 205 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +D H++LP + L + A + + RSS+LE +G DY+ TAR Sbjct: 206 --------------AQVLDVAHHLVLPCVTLLAVIYAQYMLVMRSSLLEEMGADYLTTAR 251 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL V HA+ NA+LP VT++ LQ G +++G + ET+FSWPGLG +AL+ Sbjct: 252 AKGLRDDLVRRRHAVPNALLPTVTLVFLQFGMVVSGTVTVETVFSWPGLGLLTYEALRGP 311 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D P++QG +++A+ ++++NLL +LLY V++PR+R Sbjct: 312 DLPLLQGVFVVLASSVLVMNLLAELLYRVLDPRVRES 348 >UniRef50_Q5SL23 Peptide ABC transporter, permease protein n=6 Tax=Deinococci RepID=Q5SL23_THET8 Length = 332 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 120/343 (34%), Positives = 188/343 (54%), Gaps = 21/343 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +IL+R+ +IPTF G T L F + M PGD + + + ++PE A+L A+ GLD+ Sbjct: 6 MASYILKRILSLIPTFFGATFLAFLIIQMAPGDYLTQLELDPKVTPETIARLRAQFGLDR 65 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P +QYL ++ ++H +LG S + PV E PR ++ L V + + + +PVGV Sbjct: 66 PFHEQYLLWMHNLLHLNLGYSFAYQAPVLEIVWPRVLNSMVLVVPSTVLLFLIAVPVGVY 125 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIML-----VSVHWNLTPVSGRVSDMVFL 175 A+++ S+ D LA G ++P F+ ++L+ L + PVSG S Sbjct: 126 GALRQYSLGDRVVSFLAYLGLAIPNFFLALILMYLVLQVYFRTGVMVFPVSGMTSSGFEQ 185 Query: 176 DDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 + +D H +LP +VL T +A R+ R MLE L +D Sbjct: 186 ----------------FSFWQKVVDVAWHAVLPIVVLTTSDIAGFSRIMRGQMLEALSQD 229 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 Y+RTARAKGL V+ HALRNA++P+V IG + TL++GA L E + +WPG+ L+ Sbjct: 230 YVRTARAKGLPERVVVYKHALRNAIIPIVANIGGILPTLISGAGLVEVVTAWPGITPLLL 289 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DA+ ++D VV G + + ++++ NLL DLL V+PRIR++ Sbjct: 290 DAISQQDLYVVAGFLTMGLVLLMIGNLLSDLLLAWVDPRIRYE 332 >UniRef50_C9M9U0 Oligopeptide ABC transporter, permease protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U0_9BACT Length = 319 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 174/338 (51%), Gaps = 34/338 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++L+RLG + T + TF + IPGDP+ MA R + + A A GLDK Sbjct: 12 MAKYVLKRLGYMFFTLFVVVTATFFLMRAIPGDPLSSMA--RNLPEQTKANFYARYGLDK 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ +QY Y+ ++ GDLG S+ V + + +G A++ VG+ +GV Sbjct: 70 PLVEQYGIYMKNLLRGDLGESVVFPGRSVAQTIAQTSPVSAAVGGLALVIGLVVGVALGV 129 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+ + D+ + +A+ G ++P+F G + + +V + P SG Sbjct: 130 LAALFKNRWPDYVVMFIAILGITIPVFVLGSLFQYVFAVKLHWLPASGWGLK-------- 181 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + +LP +V+ +A R +SSML+VLG+DY+ T Sbjct: 182 -----------------------KNFVLPVLVMCFGTIATYARYIKSSMLDVLGQDYVLT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +V+ H +RNAMLP +T++ Q+ + GA +TET+FS PG+G + + ++ Sbjct: 219 ARAKGLSEFQVVTRHVMRNAMLPSITLLASQIVGIFCGAFITETMFSIPGIGFYYVSSIN 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DY + G + A + +++ L VD Y +V+PRIR Sbjct: 279 NNDYWMTMGTTIFFAGLFVVMQLAVDFAYMLVDPRIRL 316 >UniRef50_C2D7K8 Dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB n=3 Tax=Coriobacteriaceae RepID=C2D7K8_9ACTN Length = 345 Score = 349 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 129/358 (36%), Positives = 202/358 (56%), Gaps = 36/358 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGL-- 58 M+++I++RL IP F+G+TL+ F +++PGDPV +MAGE+ + L A Sbjct: 1 MIKYIMKRLLQFIPVFLGVTLILFVMENVVPGDPVKLMAGEKKLDAVTELNLRATFHFIE 60 Query: 59 ----------------DKPMWQQYLHYIWGVMHGDLGISM-KSRIPVWEEFVPRFQATLE 101 D P+W++Y ++ G++ GDLG+S +S PV + + ++ T+ Sbjct: 61 TDDNGAPIFDEQGNTIDTPLWKRYALFVSGLLQGDLGVSFQRSGQPVTQILLAKYPYTIS 120 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 L + A+ VGI G+++A+KR S +D +MP FW GM+L + + Sbjct: 121 LSIVAICLEAIVGIGAGMISAIKRYSFWDMFVTLATSVLVAMPAFWLGMLLQLFFGIVLK 180 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 + GF + + G G+ D + ILPA+ L ++ A + Sbjct: 181 -----------------DLTDGFFYLPISGVGGPGSNFDDWMYYILPAVTLASVSTAYVA 223 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R+ RS +LEVL +DYIRTARAKGL+R VI HAL+NA++PVVT IGL G ++AGAILT Sbjct: 224 RIMRSQLLEVLNQDYIRTARAKGLSRRNVIWHHALKNALIPVVTYIGLDFGGMMAGAILT 283 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 ET+F+WPG+G A+ +RD+P V G V ++ +++++NLLVD+ Y ++PRIR Sbjct: 284 ETVFNWPGVGFETYRAITQRDWPTVLGSVTVIVVVVMVINLLVDVSYAFLDPRIRFSS 341 >UniRef50_A6UJW3 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Rhizobiales RepID=A6UJW3_SINMW Length = 311 Score = 349 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 119/340 (35%), Positives = 197/340 (57%), Gaps = 31/340 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA--GERGISPERHAQLLAELGL 58 ML+F LRR +IPT + + +L F ++PG + G+R P+ A+L E GL Sbjct: 1 MLRFTLRRTLQIIPTVVVVAMLIFVIFSVVPGTFAASLFADGKRAADPQMIARLNEEFGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +KP+ +++ Y+ + DLG S ++R PV + R A+L+L + AM FA VG+P+G Sbjct: 61 NKPLMERFATYVTDLAQFDLGTSFRTRQPVIDLINDRIWASLQLAIAAMAFALVVGVPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LAA++ GS+ D + A++G SMP FW G++++ + ++ N P G Sbjct: 121 FLAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYIFALQLNWLPSFGYGDGS------ 174 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 ++ILPA+ LG PLA++ R TR+ +L+VL D+IR Sbjct: 175 -----------------------FRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIR 211 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA +KG++ +V+ H RNA++ +VT +GLQ G+L+ A++ E +F+WPG+G L+D++ Sbjct: 212 TAHSKGMSEAKVVRWHVARNALVLIVTTLGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSV 271 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQG +L++ +++N VDL+Y ++PRI+ + Sbjct: 272 ASRDIPVVQGTILIIVLWFLVINTAVDLIYAAIDPRIKQE 311 >UniRef50_Q3IPR7 ABC-type transport system permease protein (Probable substrates dipeptide/oligopeptide/nickel) 3 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPR7_NATPD Length = 315 Score = 349 bits (898), Expect = 7e-95, Method: Composition-based stats. Identities = 119/336 (35%), Positives = 174/336 (51%), Gaps = 34/336 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG---ERGISPERHAQLLAELGLD 59 ++ RRLG + T I++LT+A + + PGDP + E+ E GLD Sbjct: 4 RYAARRLGTALVTLFFISVLTYALIFIAPGDPAEASLRAQLGEQPTQEQIEIFRVEHGLD 63 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P QY ++ ++ GDLG S V E R TL L M A V +P GV Sbjct: 64 EPFHVQYASWVADLLQGDLGESYYHERSVAELIGDRLPTTLALAAGGMGVALLVSVPTGV 123 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AV+ DH + AL G +MP FW G +LI L ++ L PVSG Sbjct: 124 ASAVRPNGYIDHASQLFALVGVAMPNFWLGYLLIFLFAITLGLVPVSGTG---------- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + ++LP+I LGT AV R+ RS++L+VL +++ Sbjct: 174 ---------------------GLRSLMLPSITLGTGLAAVQTRLLRSALLDVLDHEFVDA 212 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 +RA+GL V+ HALRNA++PV+TV+GLQ+G + GA++ E +F PGLG L++A+ Sbjct: 213 SRARGLGERVVVYKHALRNALVPVITVVGLQLGMAINGAVIVEVVFQRPGLGALLVEAVF 272 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 RDYPVVQG LL I+VN+ D++Y ++PRI Sbjct: 273 DRDYPVVQGVTLLAGATFIVVNVATDVVYRRLDPRI 308 >UniRef50_A0R0E2 Peptide ABC transporter, permease protein n=14 Tax=Actinomycetales RepID=A0R0E2_MYCS2 Length = 325 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 123/337 (36%), Positives = 191/337 (56%), Gaps = 24/337 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++F+ +RL +G+ ++ F VH++PGDPV I G R +PE + L G+D+P Sbjct: 13 VRFLAQRLLYSAVVLVGVLIVVFTLVHLVPGDPVRIALGTR-YTPEAYEALRTASGMDRP 71 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + +Q+ YI + GDLG+S ++ PV + R ATL LG+ ++ A + IP G+ + Sbjct: 72 IVEQFFGYIGSALTGDLGVSFRNGDPVTVTLLERLPATLSLGLVGILIALVIAIPAGIWS 131 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A++ G + D + G S+P F G++LI L + P SG Sbjct: 132 ALREGRVSDAIVRVASQFGVSIPDFRLGILLIGLFASVLGWLPTSGYRPLFDDPGG---- 187 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + H+ILP + +G + A++ R RS++LEV Y+RTAR Sbjct: 188 -------------------WLRHIILPGLTVGLVAGAILTRYVRSAVLEVAAMGYVRTAR 228 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 +KGL V H +RNA+LPV+T+ G+Q+ T+L G I+ E +F+WPGLGR + +++ R Sbjct: 229 SKGLPPPVVTFRHIVRNALLPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVFNSVAAR 288 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DYPV+QG VLL+A + +L+NLLVD+LY VV+PRIR Sbjct: 289 DYPVIQGAVLLIAVLFLLINLLVDVLYAVVDPRIRLS 325 >UniRef50_C4WPU5 Dipeptide transport system permease protein dppB n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU5_9RHIZ Length = 365 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAF-VHMIPGDPVMIMAGERGI---SPERHAQLLAELG 57 L + LRRL + ++L+ FA + + P + A E +++ + G Sbjct: 22 LNYALRRLLTLPVVLFALSLMLFALQMSLSPTQRLAAYAPSPDFLKGGQESIRRMIEQYG 81 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L+ P QY +I +M G+LG S +R PV ATLEL + A I + + I + Sbjct: 82 LNDPFHVQYGRWIGNIMTGNLGWSETARQPVSHALTSLLPATLELVLLAFIPSFLLAIYL 141 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTP---VSGRVSDMVF 174 G A + DH + G+S P++ +G++++++ + P +S V Sbjct: 142 GSRAGIYLNKWPDHLIRIFTILGWSFPVYVFGLLMLLIFYSALDWFPPGRLSQWAQATVM 201 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 D TG ID + G F D++ H+ P I L + LA + R+ R+SMLE L + Sbjct: 202 SPDFTRYTGANTIDAILNGNLQIFWDSLRHLAAPVITLTYVNLASMTRVMRTSMLETLRQ 261 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DY+RTARAKG+ + V + HA RNA+LPV T+ G+++ T++ G ++TETIF + GLG++ Sbjct: 262 DYVRTARAKGMPKRVVELRHARRNALLPVTTIAGMELATMMGGVVITETIFDYAGLGQFA 321 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + D+P + G L A +++L+NL+VDL+Y +++PR++ + Sbjct: 322 AKSAANLDFPAILGFSLYFAIVLVLMNLIVDLIYPLLDPRVKTR 365 >UniRef50_Q989T3 ABC transporter, permease protein n=2 Tax=Rhizobiales RepID=Q989T3_RHILO Length = 314 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 195/337 (57%), Gaps = 24/337 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ R+ +IP +T + F ++ PGD +++AG+ SP + A + L LD Sbjct: 1 MIRYLITRMLSIIPVMGVVTAVVFGLTYLSPGDAAVVLAGDYA-SPAQIAAIRERLHLDA 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY H++ V+ GDLG S+ S PV + R + T+ L + A + + + +P+G+L Sbjct: 60 PIVPQYFHWLGSVLRGDLGNSIFSEQPVLALILSRVEPTIILAIAATLVSVIIAVPLGLL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA KRG I D + G ++P F G +LI V++ P+SG Sbjct: 120 AARKRGGIADQLVSFFGIAGTAIPAFLIGYLLIFTFGVYFGSMPISGF------------ 167 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G D + + H++LPA +LG A+I R+TR+S +EVL +D+IR A Sbjct: 168 -----------PGLDSGAWEVLRHVLLPATMLGFAQTALITRITRASAIEVLNQDFIRVA 216 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL +I+ H LR +P+VT++G+ +L G ++TET+F+ PG+GR L+DA+Q Sbjct: 217 RAKGLDEFTIIMRHCLRLIAVPLVTIVGMSFAYMLGGVVITETVFAIPGVGRLLVDAIQH 276 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 +D PV+QG +L+ + + +L+NL+VDL Y +PRI++ Sbjct: 277 KDVPVIQGVLLISSFVYVLINLMVDLSYLFFDPRIKY 313 >UniRef50_Q28M48 Binding-protein-dependent transport systems inner membrane component n=8 Tax=Bacteria RepID=Q28M48_JANSC Length = 335 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 123/356 (34%), Positives = 187/356 (52%), Gaps = 39/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F +RRL L IPT I I+ + F V + P DP + I PE + LG++ Sbjct: 1 MLTFTIRRLILAIPTLIFISFIIFLIVKLSPSDPTAGL--PLTIPPEVREAIRESLGVND 58 Query: 61 PMWQQYLHYIW--------GVMHGDLGI----------SMKSRIPVWEEFVPRFQATLEL 102 P++ QY ++ +M G G S ++R PV + + R TL + Sbjct: 59 PVFVQYFKWLKLMMWDEPLHLMDGWFGTEMAPDGPRIISYQTRSPVMDLIMQRMPQTLWV 118 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 + I + +P+GV++A ++ S FD +++ G+S+P F+ G++ I++ +V+ Sbjct: 119 VGTSYIVGILIAVPLGVISAYRQYSWFDQIGTFVSMIGFSVPTFFTGVLFIVIFAVNLGW 178 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 P + T F + MI+P +VLG + I R Sbjct: 179 FPS-------------------VYDTTLEVTNWETFWTQIRQMIMPVMVLGLFNASQISR 219 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 R+SML+ L +DY+RTARAKGL V++VH LRN+M+PVVTVI L V + GAI+TE Sbjct: 220 YMRASMLDNLNQDYVRTARAKGLGESVVVLVHVLRNSMIPVVTVIALNVPAVFGGAIITE 279 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +F G+G+ LI A+Q D PVVQ + A +I+L NLL D+LYGV++PRIR+ Sbjct: 280 QVFKVNGIGQLLIIAIQAGDVPVVQTVSFIFAILIVLFNLLADILYGVLDPRIRYD 335 >UniRef50_C6A3B4 ABC-type dipeptide transport system, permease component n=22 Tax=cellular organisms RepID=C6A3B4_THESM Length = 339 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 125/337 (37%), Positives = 212/337 (62%), Gaps = 6/337 (1%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPM 62 Q+I+ R ++IPT + + + F F+ ++PG+PV+ + G + ISPE+ L+ GLDKP+ Sbjct: 7 QYIVIRGLMIIPTILILYTIVFIFLRILPGNPVLAVVGTKNISPEQLQHLMEMAGLDKPL 66 Query: 63 WQQYLHYIWGVMHGDLGISMKS--RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + QY Y+W ++HGD G+++ PV E RF ATLEL + + +G+ G + Sbjct: 67 YVQYFDYLWKMVHGDFGVTLAFPMGKPVVEYLKLRFPATLELTLFGFSISVLLGLLTGTI 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ + D ++ Y++ I W+GMML + +H++L P SGR+ + L Sbjct: 127 AAAKKSTKIDTGMRLYSIIAYTLFIPWFGMMLQYVFGIHFHLLPTSGRIDPGIEL---QR 183 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +TG ++D+ + G F AV H+ILPA LG + R+ R++M++VL +D+IR+ Sbjct: 184 ITGLYVLDSLLTGNWEAFSSAVRHVILPATTLGIVLSGAYTRLVRNNMVDVLSQDFIRSY 243 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 A+G+ +V+ +AL+NA +PVVT++GLQ LL GA+LTET F+WPG+G +++D + Sbjct: 244 YARGVKDWKVMW-YALKNAFIPVVTLMGLQFAILLGGAVLTETTFNWPGMGTFIVDRIDY 302 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDY +QG V+ A + L++L+VD++Y +++PR+++ Sbjct: 303 RDYNAIQGAVVFFAFFVGLISLIVDIVYALLDPRVKY 339 >UniRef50_Q1LMX8 Binding-protein-dependent transport systems inner membrane component n=36 Tax=cellular organisms RepID=Q1LMX8_RALME Length = 340 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 130/339 (38%), Positives = 189/339 (55%), Gaps = 22/339 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPER-HAQLLAELGLDK 60 L F L RL + IG+ ++ F + M PGDP +MAGE G QL + GLD+ Sbjct: 10 LSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQ 69 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ Q Y+ GV DLG S ++ +PV + + R AT L A +F+ +G+ +GV+ Sbjct: 70 PVLTQLGIYLKGVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVI 129 Query: 121 AAV----KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 AA R D + AL Y+ P+FW +M I+L SV P G S Sbjct: 130 AARTRYENRRRWIDSAVMSGALLLYATPLFWLSLMAIILFSVVLGWLPAFGMESVGAGYT 189 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 + D H++LP I LG +AV VR+TR+SMLEV+G D+ Sbjct: 190 GLARVQ-----------------DIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDF 232 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 ++TARAKG+ RVI VH LRNA+LPV+T G+Q+G + GA+LTET+FSWPG+GR + D Sbjct: 233 VKTARAKGVPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFD 292 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 AL +RDY ++ G + + +++ NL+ D++Y ++PRI Sbjct: 293 ALLQRDYQLLLGIFFVTSALVVFFNLVTDVVYRFIDPRI 331 >UniRef50_A4ECM8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECM8_9ACTN Length = 345 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 205/356 (57%), Gaps = 35/356 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGL-- 58 M ++I++R+ IP F+G+TL+ FA +++PGDP+ ++ G++ +SPE QL L Sbjct: 1 MGKYIVKRVLQFIPVFLGVTLILFALQNIVPGDPIKLIGGDKALSPEVELQLRVRYHLVQ 60 Query: 59 --DK--------------PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL 102 D + +YL+Y+ G++HGDLG S + ++PV E F ++ T++L Sbjct: 61 TDDDGNAILDENGDPVQTSLVDRYLYYMNGLLHGDLGNSYQRKLPVTEIFAQKYPYTVKL 120 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 CA++ +GI G+++AVKR S +D ++P FW GM+L + V Sbjct: 121 AACAIVLEAIMGIGAGIISAVKRYSFWDILVTLTTSILVAVPAFWLGMLLQLFFGVILK- 179 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 + G + + + G + H +LP I L ++ A R Sbjct: 180 ----------------DATGGAISMPISGAGGSSSQYQDWMHYVLPTITLASVSTAYAAR 223 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 + RS +L+V+ +DYIRTA+AKGL+ +I+ HAL+NA++PVVT IG+ G +L+GAILTE Sbjct: 224 IMRSQLLDVMNQDYIRTAKAKGLSNRAIIVKHALKNALIPVVTYIGVDFGGMLSGAILTE 283 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 T+F+WPG+G + A+ RD+P+V GGV L+ +++++NLLVD+ Y ++PRIR Sbjct: 284 TVFNWPGIGYEVYRAISMRDWPIVMGGVTLIVVVVMVINLLVDISYAFLDPRIRLG 339 >UniRef50_C0AEM4 Nickel-transporting ATPase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEM4_9BACT Length = 328 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 190/362 (52%), Gaps = 58/362 (16%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +FI RRL IP I +TF + +PG P E+ +S E L A GLDK Sbjct: 1 MFRFIARRLLETIPVLFVIVTVTFFMLRFVPGGPFT---SEKAVSKEILRNLEAHYGLDK 57 Query: 61 PMWQQYLHYIWGV-----------------------MHGDLGISMKS-RIPVWEEFVPRF 96 P+ QQYL+Y+W + + DLG S K V E + Sbjct: 58 PLHQQYLNYLWDLCPKKFDPRVFFGEHNSGLDLKAALGIDLGPSFKYPNRTVNEIIAQKL 117 Query: 97 QATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLV 156 +LELG A++ A +G+ +GV AAV++ S+ D+ A +A+ G +P F G +L++L Sbjct: 118 PVSLELGGWALLIALTLGVTLGVAAAVRKNSLADYAASTVAMIGICVPTFVLGPLLVLLF 177 Query: 157 SVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIP 216 ++H P SG + +LPA+ LG + Sbjct: 178 AIHLGWLPPSGWYGPVDR-------------------------------VLPALTLGLVY 206 Query: 217 LAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA 276 A I R+TR MLEVL +DYIRTARAKG + +R+++ HALR +LP+V+ +G + +++ Sbjct: 207 AAYIARLTRGGMLEVLNQDYIRTARAKGASELRIVLKHALRGGLLPLVSYLGPAIAGVIS 266 Query: 277 GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 G+ + ETIF PGLGR + ++ RD+ +V G VLL A +I+L+NLLVD++ +NP+++ Sbjct: 267 GSFVIETIFQIPGLGREFVTSVFNRDFTLVLGTVLLYAALIVLLNLLVDIVQVWLNPKLK 326 Query: 337 HK 338 + Sbjct: 327 FE 328 >UniRef50_Q21J40 Binding-protein-dependent transport systems inner membrane component n=12 Tax=Bacteria RepID=Q21J40_SACD2 Length = 311 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 171/339 (50%), Gaps = 34/339 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML+FI+ RL IP + L+TF V M PG P I +R + + L LD Sbjct: 1 MLRFIVFRLLAAIPVLFFVILITFTLVRMAPGGPFDI---DRAVPQQVLDNLNKRYHLDD 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ Q+ Y++ ++ GD G S K V E AT+ELG A++ A +GI G+ Sbjct: 58 PIHVQFGDYVFNLLKGDFGPSFKYPSRTVTELIGIGLPATIELGFYALLVAMVIGILAGI 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LA ++ + D+ + A+ G +P F G +LI+ + + PVSG Sbjct: 118 LAGIRPNTWQDYVPMSFAMIGICLPSFVLGPLLILSFGIGLDWFPVSGWGVSPGDK---- 173 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +LP++ LG A + R+TR ML+V+ +DYIRT Sbjct: 174 --------------------------VLPSLTLGAAYAAYVARLTRGGMLDVMSQDYIRT 207 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL R++ HALR A+ PV+ G LL+G+ + ETI+ PGLGR+ + A Sbjct: 208 ARAKGLPEWRIVTKHALRGALNPVIAFAGPAAAGLLSGSFVVETIYQIPGLGRFYLQAAF 267 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++ G + ++ +II+ NLL D++ +NP+++H Sbjct: 268 NRDYTMILGTTIFLSVLIIVFNLLADVIQAALNPKLKHG 306 >UniRef50_Q2CGQ4 Dipeptide transport system permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ4_9RHOB Length = 342 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 124/337 (36%), Positives = 193/337 (57%), Gaps = 4/337 (1%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+ +LRRLG+ + IG+++L FA +IPGDP I G + E+ + E+ LD+P Sbjct: 5 LRILLRRLGISVIVLIGVSMLIFAIARIIPGDPARIALGPNA-TAEQVVMIRTEMHLDEP 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY H++ V+ GDLG S+ + PV + ATLEL + A I G+P+G+LA Sbjct: 64 IVAQYGHFVADVLRGDLGTSLYTNRPVTTDIAEFLPATLELVIFAGILMVGFGLPLGILA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A RG DH L L S P F W ++L++L + + L PV+GR+ + Sbjct: 124 ARHRGRWPDHVVRVLTLLTVSAPSFVWAVILMLLFAFYLPLFPVAGRLDSAYD---ITRV 180 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 TGF+ +DT I G G F+DA+ H++LPA+ L + R+TR++M+E + YI A Sbjct: 181 TGFLTVDTLIAGNFGAFLDALHHLVLPAVALALSGIGQAARLTRANMVETYDKPYIEMAE 240 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A G R+ +A + +++P +T+IGL +L A L E +F+WPGL R+ + + R+ Sbjct: 241 AYGFFPSRIARRYAFKPSLIPSLTIIGLDFAAMLGNAFLVEAVFAWPGLSRYGVAVILRK 300 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D + G VL++A ++VN++VDLL +N RIRH Sbjct: 301 DLNAIMGTVLIIALTFLVVNIIVDLLIAFLNTRIRHS 337 >UniRef50_A8I2Z1 ABC transporter permease protein 2 n=15 Tax=Bacteria RepID=A8I2Z1_AZOC5 Length = 343 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 127/335 (37%), Positives = 196/335 (58%), Gaps = 3/335 (0%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + RR +P +G+ + TF + ++PGDP + A E + ++GLDKP Sbjct: 8 ARRAGRRFLSSLPALLGVLVFTFLLMRVLPGDPAVFFASGPTAGKEEIETIRKQMGLDKP 67 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 M +Q Y+ V G+LG S+ + PV + R A+LEL A+ A +P+G+ A Sbjct: 68 MPEQLGRYLVDVAQGNLGRSLTTGQPVSADLKERLPASLELTFAALFIALLSAVPLGIAA 127 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTP-VSGRVSDMVFLDDSNP 180 A++ GS+ DH L G +P F G++LI + P +GRV L Sbjct: 128 ALRPGSVVDHGVRLLCALGVCVPTFVSGLLLIYVFYYLLGYAPDPTGRVDIFTSLPP--R 185 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 TGF+LID A+ G+ + A + ++LPA + +A + R+TR++ML LG D++RTA Sbjct: 186 ATGFLLIDFALAGDFEGWRAAASQLVLPAFTMALFVVAPLARITRAAMLSSLGSDFVRTA 245 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+ GL+R R+I+V+ALRNA+LPV+T+ G+ T+L +L E +FSWPG+ + +DAL Sbjct: 246 RSIGLSRWRIIVVYALRNAILPVLTITGIVFSTMLGANVLVEKVFSWPGVASYALDALLA 305 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 DY VQG VLL+A + +LVNL++D+LYG+ +PRI Sbjct: 306 SDYAPVQGFVLLMAFIFVLVNLVIDILYGIADPRI 340 >UniRef50_A6Q8P1 Dipeptide ABC transporter, permease n=5 Tax=Bacteria RepID=A6Q8P1_SULNB Length = 317 Score = 348 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 194/338 (57%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+++++ RL + ++ + F ++ GDP+ ++ + + AQ+ LGLD Sbjct: 1 MIRYVISRLFNSFLVMLAVSFIAFFIMYKA-GDPLQLLLPPDA-TAQEVAQMRHTLGLDG 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 QY ++ + HG+LG S P + + R ATLEL + AM + +G+P+GV+ Sbjct: 59 SFLTQYKSFMIQLSHGNLGNSFIYGEPALDIVLERLPATLELAILAMGVSILLGVPLGVI 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +++ S+ + +LTG S+P+FW GMML+++ SV + + P SGR +F Sbjct: 119 SSMDPDSLKSKAIMLFSLTGISIPVFWIGMMLVLIFSVVFEILPSSGRGEVYLFSSVFT- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+I+P L LA+I+R+T+S M EVL EDY++ A Sbjct: 178 ------------------WDGIKHLIMPVTTLSLFQLALIIRLTQSGMREVLTEDYVKFA 219 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R ++ HA +N +LP++TVIG+Q G L+A I+TETIF+WPG G+ +ID++Q Sbjct: 220 TAKGLPRKVIVYRHAFKNTLLPLITVIGIQFGQLIAFTIVTETIFAWPGTGKLIIDSIQN 279 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D PVV +L+VA + IL+N +VD+LY V+PR+R Sbjct: 280 LDRPVVIAYLLVVALIFILINFIVDILYTWVDPRVRLS 317 >UniRef50_B2Z3S7 ABC transporter permease protein n=3 Tax=Rhizobiales RepID=B2Z3S7_AGRRK Length = 310 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 196/339 (57%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M QFIL +L T + F + + GDPV +M + PE A+ A GLD+ Sbjct: 1 MAQFILIKLSRAFLTLLLAVTFVFVVLRLS-GDPVSMMLPDD-TPPEIVAEYRAAWGLDR 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY+ +IW +HGDLG S + P V R TL LG+ + VG+ G+ Sbjct: 59 SLPEQYVRFIWSALHGDLGYSFRDDRPAVTVVVERVPMTLLLGLSSFAITVVVGLLAGIA 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KRG+ DH + ++ G+S+P F+ +++IML S+ W L P SG + Sbjct: 119 AALKRGTSVDHVVMAFSIFGHSIPNFFLAILMIMLFSMSWRLLPSSGGTT---------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 +H++LPA+ LG I + R TRSSMLEVL + Y+RTA Sbjct: 169 ---------------------WSHLVLPAVTLGIINAGTVARFTRSSMLEVLHQPYMRTA 207 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL R I+ HA+ NA +P+VTV+GL++G L+AG+++ ET+++WPG+G L++A+ + Sbjct: 208 RAKGLRLTRRIMSHAIPNAAIPIVTVLGLRLGGLIAGSVVIETVYAWPGIGLMLVNAVSQ 267 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RD PVVQ VLLVA +++ N +VD+ YG ++PRI +++ Sbjct: 268 RDLPVVQTIVLLVALTMVVTNFIVDITYGWLDPRIENRR 306 >UniRef50_B5GK78 ABC-transport protein n=2 Tax=Streptomyces RepID=B5GK78_9ACTO Length = 324 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 139/337 (41%), Positives = 199/337 (59%), Gaps = 24/337 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++ RRLG+ + T + +++ F V +PGD +AGE+ SPE A + E GLD Sbjct: 9 TSYLARRLGMSLVTMVLVSIAVFLGVRAMPGDTAQALAGEQ-TSPEVLASIRQEYGLDDN 67 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY Y+ + GDLG S ++ +PV + TLEL A++ A VGI GVLA Sbjct: 68 IAVQYWRYLSHAVTGDLGTSARTGLPVLDSIREALPITLELAALALLLAVVVGIGAGVLA 127 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV++G + A G+AL G S+P FW G++L++ ++ + SG V Sbjct: 128 AVRKGKPSEWLANGIALLGMSVPSFWLGIILVLAFAIATPVFAASGFVPFGTDP------ 181 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 ++ + ++LPAIVLG+ AV++R TR++ML+ L DY RTAR Sbjct: 182 -----------------LENLRRLVLPAIVLGSGLAAVVMRQTRAAMLDSLSADYTRTAR 224 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGLTR +VI HALRN+++ VVTV+GLQ+G L++GA++TE +F PG G+ IDA+ R Sbjct: 225 AKGLTRRQVIGGHALRNSLVTVVTVLGLQLGQLISGAVVTEQVFVLPGFGKLTIDAVFTR 284 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 DY +VQG VL + ILVNLLVD LY VV+PRIR Sbjct: 285 DYAMVQGVVLFTSAAYILVNLLVDFLYSVVDPRIRLG 321 >UniRef50_Q316S1 Oligopeptide/dipeptide ABC transporter, permease protein n=95 Tax=Bacteria RepID=Q316S1_DESDG Length = 391 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 117/336 (34%), Positives = 186/336 (55%), Gaps = 16/336 (4%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ FI+RR+ + I+ + FA H + GDPV M G +S + L +LGL+ Sbjct: 67 MIAFIVRRVTQALIVMFVISFIGFAIKHSL-GDPVREMVGV-SVSVQEREALREQLGLND 124 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P Q+ ++ GDLG S R P E + + ATLEL C+ + + PVGV Sbjct: 125 PYLVQWGRFVKNAAQGDLGQSFFYRKPAMEVILDKAPATLELVFCSTLLILLISTPVGVY 184 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + S +G ++ G S+P+F ++LI + +V + P GR Sbjct: 185 AAYRPNSPLSRFFMGFSVVGVSIPVFLTAILLIYIFAVELHWLPSYGR------------ 232 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G + W +D + H+ILP+I L +I L + +R+ R+ M EVL +Y++ A Sbjct: 233 --GETVTLFGFWSTGLLTLDGLKHLILPSIALSSIMLPLFIRLIRAEMKEVLETEYVKFA 290 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL RV++VHA +N +LPV+TV G+Q+G ++A ILTET+F W G+G I+A++R Sbjct: 291 RAKGLRERRVLMVHAFKNTLLPVITVGGVQIGLMIAYTILTETVFQWQGMGFMFIEAVER 350 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D ++ ++ V + ++VN +VD++YG+VNP +R Sbjct: 351 SDTALLVAYMVFVGALFVVVNTVVDIIYGLVNPMVR 386 >UniRef50_Q11BX9 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BX9_MESSB Length = 319 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 123/341 (36%), Positives = 188/341 (55%), Gaps = 25/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGL 58 ML+++L RL L IPT +G+ LTF + ++PGD V M G +PE A A LGL Sbjct: 1 MLRYLLNRLMLAIPTLLGVATLTFFMLALLPGDAVETMLRADGGNPTPEIIAAERARLGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P+ Q+ ++WG+ GDLG S + PV +E + R TLEL V MI A + +P+G Sbjct: 61 DRPILVQFGDFLWGLFTGDLGSSSWTGKPVLDEIMLRLPVTLELAVLGMIIAVVIALPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 LA + G+ D+ A G ++P FW GMML + + +N P G S Sbjct: 121 TLAGIFHGTWLDNLIRIFAFGGIALPSFWLGMMLALAMLWFFNWLPPLGSNSLFSDPIR- 179 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + LPA+ +G A++VRM R+S++E + EDY+R Sbjct: 180 ----------------------VLQQLTLPALAVGYRYAAMLVRMMRASVIEAMSEDYVR 217 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL ++ H + N++LP VT+IGL+ ++ ++ E +FS GLGR ++++ Sbjct: 218 TARAKGLPASSIVRRHIVPNSLLPTVTIIGLEFALMVGSLVVIEQVFSLNGLGRLFVESV 277 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 R D V+QG V+++ + I +NLLVDL Y ++PRIR + Sbjct: 278 ARSDLIVIQGIVVVLTIIFIAINLLVDLAYAAIDPRIRLGR 318 >UniRef50_A6X471 Binding-protein-dependent transport systems inner membrane component n=11 Tax=Alphaproteobacteria RepID=A6X471_OCHA4 Length = 327 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 177/338 (52%), Gaps = 18/338 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG-ISPERHAQLLAELGLDK 60 L F LRR+ IP + I + +F + + PGD V + G+ G P+ A L E GLD+ Sbjct: 7 LTFALRRILQAIPVILLIMIGSFLLIKLAPGDTVDALVGDMGGADPQFVANLRTEYGLDQ 66 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+W Q Y+ + D G S PV + + R TL L V ++ A GI +G Sbjct: 67 PVWTQLWIYMTKLAQFDFGWSYVYEQPVLDVLMARLVPTLLLMVSSLSVAFIFGIALGAF 126 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA + S+ D+ L L Y+MP F+ ++L+ + SV PV G + Sbjct: 127 AARRAYSLTDNAISTLGLVFYAMPSFFLSLILMFIFSVKLGWLPVGGYKTI--------- 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + N D H+++P L I LA +R+ R+S+LEV DY+RTA Sbjct: 178 --------AGFYTGWKNVWDIAVHLVMPTTALSLIYLAFYMRLMRTSVLEVADLDYVRTA 229 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG + R++ H +RNA LPVVT++GLQ T+L G+++ ETIFS PGLG+ ++ + Sbjct: 230 RAKGASGARLMFHHIMRNAFLPVVTLLGLQFSTVLGGSVVIETIFSLPGLGQLAYTSVIK 289 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD + G + L + ++++VN + DL+Y ++ RI Sbjct: 290 RDLNTLMGIIFLCSVLVVIVNFITDLIYARLDSRIELS 327 >UniRef50_Q9YFD8 ABC transporter, permease protein n=1 Tax=Aeropyrum pernix RepID=Q9YFD8_AERPE Length = 342 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 124/343 (36%), Positives = 193/343 (56%), Gaps = 9/343 (2%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +++I+ R IPT G+++L F ++ GDP I ++PE ++ D P Sbjct: 3 IKYIIYRFLSAIPTLFGLSILVFILTRLV-GDPAAIYIHPD-MTPEDVQRVRELYHFDDP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 ++ QY++++ GV+ GDLG S+ + +PV E ATLEL + A + VG+ +G A Sbjct: 61 LYVQYIYWLKGVLQGDLGYSVTANMPVTEAIKSFLPATLELALYAFTLSIIVGVYLGTKA 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + + DH LAL+GYSMP+FW +ML+ L + GR+S V P Sbjct: 121 AANKDKLIDHLTRLLALSGYSMPVFWLALMLLYLFYNVLD-FVGPGRLSLEVRFKYMPPY 179 Query: 182 ------TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 TG + ID + FIDAV H+I P + I +A+ +R+ RSSM+E + ++ Sbjct: 180 GDFKFYTGLLTIDALLNRNIEVFIDAVKHLIPPVLTQTYIHIAIFIRVLRSSMIEEMNKE 239 Query: 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLI 295 Y+ A +KGL R V+ + RN+ + +V V GLQ L++G +LTET+F+WPGLGR+ Sbjct: 240 YVDFALSKGLRREVVLKDYVRRNSYISLVNVAGLQFVGLMSGVVLTETVFNWPGLGRFAA 299 Query: 296 DALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +A + D V G L V T+ I+VNL VD+L ++PRIR++ Sbjct: 300 NAAIQLDPAAVVGFTLFVGTLFIVVNLAVDILLAYLDPRIRYE 342 >UniRef50_A9BGI2 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Thermotogaceae RepID=A9BGI2_PETMO Length = 326 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 17/337 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L++I+RRL L IP +G+++++F + + PGD + IS E+ +L GLDK Sbjct: 4 LKYIIRRLILAIPVLLGVSVISFFVMQLAPGDFLDTYRINPNISREQIQELERLYGLDKN 63 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 QY ++ +M GD G S +I VW+ + R +ATL LGV IF +GIP+G+ A Sbjct: 64 PVTQYFLWLGNIMKGDWGYSFVYKIDVWQVMLRRLEATLLLGVTTFIFTWGIGIPLGITA 123 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ + D L L G S+P F++ ++ +M S + + P+ G +S Sbjct: 124 ALHQYKFTDQALSTLGLIGLSIPNFFFALLWLMW-SANTGIFPIGGMLSREFANLP---- 178 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 D H+ P + LGT LA +R+ R +L+ + +DY AR Sbjct: 179 ------------WYKQIGDFFWHVAGPVVTLGTASLAGTMRVMRGQILDEMNQDYAEFAR 226 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG+ VI H LRNA+ PV+T +G + ++L GA++TE +FSWPGLG + DA+ ++ Sbjct: 227 AKGMPSDVVIYKHTLRNAINPVITSLGFSLSSILGGALITEYVFSWPGLGTLMRDAIFQQ 286 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D +V + L ++I NL+ D+L +PR+R + Sbjct: 287 DIYLVMANLFLQGILLITGNLIADILLAASDPRVRLR 323 >UniRef50_B9JIR5 Dipeptide ABC transporter n=6 Tax=Alphaproteobacteria RepID=B9JIR5_AGRRK Length = 340 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 123/333 (36%), Positives = 196/333 (58%), Gaps = 1/333 (0%) Query: 6 LRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQ 65 +R+ IP+ IG+ ++TF +PGD +PE AQ+ LGLDKP+W Q Sbjct: 8 AKRIATAIPSIIGVVIVTFLLARALPGD-AAAYYAGSSATPESIAQIRTALGLDKPLWFQ 66 Query: 66 YLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKR 125 + +Y + ++HGDLG S+ S PV+++ R A++EL +CA++FA +G+P+G+ AA + Sbjct: 67 FGNYAFRLLHGDLGTSLSSGQPVFQDLATRLPASIELTLCALLFAMLIGLPLGITAATRP 126 Query: 126 GSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFM 185 G DH + G + P F+ + L+ + + P + + +TG Sbjct: 127 GKTVDHICRIIVSVGAAFPTFFVALGLVYVFYFRLGIAPEPLGRLNDTYFSMPPTITGLY 186 Query: 186 LIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGL 245 LIDT + G+ F +++ ++LP+I LG LA I R+ R+SML L D+ RTARA GL Sbjct: 187 LIDTLLVGDVAAFWASLSQLVLPSISLGLFALAPIARIARASMLASLSSDFCRTARAMGL 246 Query: 246 TRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPV 305 +R R++ + LRNAMLPVV ++G+ LL +L E +F+WPG+G + ++A+ DY Sbjct: 247 SRTRIVYGYGLRNAMLPVVNILGMVFSFLLGANVLVEQVFAWPGIGAYAVNAVITSDYAA 306 Query: 306 VQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 VQG VL++A + IL+NL VDL ++PR+R+ Sbjct: 307 VQGFVLMMAILYILLNLAVDLTAAAIDPRVRYD 339 >UniRef50_C7Q863 Binding-protein-dependent transport systems inner membrane component n=14 Tax=Actinomycetales RepID=C7Q863_CATAD Length = 355 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 184/341 (53%), Gaps = 22/341 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L+++L RL + + + +F ++PGDPV + G +S + A L + G+DKP Sbjct: 33 LRYVLGRLIGAAVSMLAVVFTSFFLFRVVPGDPVRALTGGHPVSAAQMATLRHQFGIDKP 92 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ Y V+ GDLG S + + PV AT+ L A + A +G+ +GV + Sbjct: 93 LIAQFGDYAGRVVRGDLGTSYQYKRPVSGLIGSHVWATVYLVGTATLIAALLGLRIGVRS 152 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW----NLTPVSGRVSDMVFLDD 177 A K GS D + G+AL +SMP FW ++LI++ V + L P G S V Sbjct: 153 AWKHGSRSDRASTGIALVLWSMPTFWLALILIVVFGVGFGPIPGLFPTGGMNSPDV---- 208 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 G D + H++LP + L + A + R+++LE +G DY+ Sbjct: 209 --------------HGLFPVIWDHLRHLVLPCLTLVAVVYAQYLLTMRATLLEEVGADYL 254 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 TARAKGL V HA+ NAMLP VT++ L +GT ++G+ILTET+FSWPGLG +A Sbjct: 255 TTARAKGLREDDVRRKHAVPNAMLPAVTLVFLNLGTAVSGSILTETVFSWPGLGSLFYEA 314 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L D P+++G + A +I++NLL +LLY +++PR+R Sbjct: 315 LTVPDLPLLEGLFIFFAAAVIVMNLLAELLYPILDPRVRTS 355 >UniRef50_Q6MQU8 Peptide ABC transporter, permease protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQU8_BDEBA Length = 343 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 105/356 (29%), Positives = 180/356 (50%), Gaps = 37/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA--------------------- 39 M+ +++RRL L+IPTF GIT++TF +++ PG P+ Sbjct: 1 MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSR 60 Query: 40 GERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQAT 99 G+ ++ E L + G DKP+ ++Y+ ++ + D G S + PV + +F + Sbjct: 61 GDSAVNEEVIEALKKQYGFDKPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVS 120 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH 159 L+ G+ ++I V IP+GV A+K G FD + YS+P G+ LI++ + Sbjct: 121 LQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNLTYSIPPLVLGIFLIVVFAGK 180 Query: 160 WNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAV 219 N+ P+ G SD D + G +D H +LP I Sbjct: 181 LNMFPLGGLHSD----------------DYEVLTTWGKIVDRAHHFVLPLICYMIGGFTE 224 Query: 220 IVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAI 279 + + R+SML+V+ D++RTARAKGL+ VI HALRNA++P+ T +G G LAG++ Sbjct: 225 LSTLMRNSMLDVVKSDFVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSL 284 Query: 280 LTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 + E +F+ G+G ++ RDY V+ G + + +++ + D++Y +++PRI Sbjct: 285 IIEQMFNLDGIGLLGYQSIMARDYNVIMGLTFISSLLLMFGRIFSDIIYVLIDPRI 340 >UniRef50_B0PEI0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI0_9FIRM Length = 315 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 189/341 (55%), Gaps = 34/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA---GERGISPERHAQLLAELG 57 ML++I+RRL +P GITLL F + PG+P I+ GE + E+ A++ +LG Sbjct: 1 MLRYIVRRLFSAVPVLFGITLLAFLLGILSPGNPAEILLSSGGESAYTAEQLAEVERQLG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD+P QQY+ +I GV+ GD G S +++ PV EE RF T++L A++ VGIP Sbjct: 61 LDRPYPQQYVRWIGGVLQGDWGDSFRTKEPVREELFSRFGVTIKLAAGALLLTVMVGIPF 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 GVL+A + G + D + ++ S+P FW ++ + + + + P SG+ Sbjct: 121 GVLSAAREGGLMDRLSQWGSILLLSVPSFWAAILSVGIFAEQLHWLPTSGQ--------- 171 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 + H++LPAIVL + +R+TRS+++ L YI Sbjct: 172 ----------------------ETWLHLVLPAIVLSFSTVGTTIRLTRSTVIRELSSQYI 209 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 AR KG+++ ++ HAL NA+ PV+T++G +G +L G+++ E++F+ G+G++ +D+ Sbjct: 210 TAARGKGISQRLILGRHALSNAIPPVLTLLGNYLGGILGGSVVVESVFAINGIGKFALDS 269 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + RDYP +QG V++ + ++LL DLL NP+IR Sbjct: 270 IAVRDYPALQGYVMITGFTFVAIHLLTDLLSIWFNPQIRLG 310 >UniRef50_Q1GIR9 Binding-protein-dependent transport systems inner membrane component n=20 Tax=Alphaproteobacteria RepID=Q1GIR9_SILST Length = 335 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 116/356 (32%), Positives = 191/356 (53%), Gaps = 39/356 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F +RRL + +PT + I+L+ F + + PGDP+ + + PE ++ LGL + Sbjct: 1 MLTFTIRRLIIAVPTLLFISLVIFLLLELAPGDPMAQV--PLTVPPEVKEKMRLALGLGE 58 Query: 61 PMWQQYLHYIWGVM-----------------HGDLGI-SMKSRIPVWEEFVPRFQATLEL 102 P+ ++ ++ GDL + S ++R PV + V R TL + Sbjct: 59 PVHIRFWKWLVQFFWIEPQVLIDHIFGTSFSAGDLRVISWQTRSPVMDIVVQRLPQTLWV 118 Query: 103 GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNL 162 A I A + +P+G+ +A ++ S FD +++ G+S+P F+ G+++I++ SV Sbjct: 119 VGTAYIVAILIALPIGIYSAYRQYSWFDQMGTFVSMVGFSVPPFFSGVLVIVIFSVQLGW 178 Query: 163 TPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVR 222 P + T F+ + M++P +VL A + R Sbjct: 179 FPS-------------------IYDTTLEVNSWETFVKQLQQMVMPVMVLALQITAQLSR 219 Query: 223 MTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTE 282 R+SML+ L +DY+RTARAKGL V++VH LRN+M+PVVTVI L + ++ GAI+TE Sbjct: 220 FMRASMLDNLNQDYVRTARAKGLGEYTVVMVHVLRNSMIPVVTVIALGIPSIFGGAIITE 279 Query: 283 TIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 +F G+G+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 QVFKVNGIGQLLIGAIQANDLPMVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 335 >UniRef50_Q9ADY0 DfpB n=3 Tax=Agrobacterium tumefaciens RepID=Q9ADY0_RHIRD Length = 324 Score = 346 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 190/336 (56%), Gaps = 24/336 (7%) Query: 5 ILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAG-ERGISPERHAQLLAELGLDKPMW 63 + R+L + + L F+ ++++PGDPV+++ G + SPE A + A+LGLD+P+ Sbjct: 11 VARKLLTAFIQLLVVATLIFSVMYIMPGDPVLLLLGADSNPSPEAIASMRAQLGLDQPVI 70 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 QY ++ +H D G S+ + PV + TLEL A+I A +G+P+G+ AA+ Sbjct: 71 SQYFVWLRNALHLDFGKSLTNGYPVANYVMQNLPRTLELAFAAIIIAALIGVPIGIAAAL 130 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 KRGS D +A G S+P++ G +L++ SV P SG Sbjct: 131 KRGSTRDTVLTSIATIGISVPVYIVGTLLVLFFSVKLGWLPASGYTDIS----------- 179 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 N ++ + LPA LG A I RMTRSS+LE+LG D++R RAK Sbjct: 180 ------------RNVLEHFRKLALPAFALGFGLAASIARMTRSSVLEILGRDFVRALRAK 227 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G+ R+I H RNA +P VT+IGLQ+G L+ G +L E +F+WPGL L+ A+ R+Y Sbjct: 228 GMPERRIIWQHVFRNAAIPNVTIIGLQLGNLMGGTVLVEAMFNWPGLSTLLVGAVSARNY 287 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 P+VQG +L +A IL+NL+V+LLY +++PRIR K Sbjct: 288 PLVQGSMLAIAAAFILINLIVELLYSLLDPRIRRKS 323 >UniRef50_P24138 Oligopeptide transport system permease protein oppB n=79 Tax=Firmicutes RepID=OPPB_BACSU Length = 311 Score = 346 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 125/340 (36%), Positives = 185/340 (54%), Gaps = 35/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML++I RRL +I T I +TF + PG P GE+ + PE A L A GLDK Sbjct: 1 MLKYIGRRLVYMIITLFVIVTVTFFLMQAAPGGPFS---GEKKLPPEIEANLNAHYGLDK 57 Query: 61 PMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P++ QY+ Y+ V D G S K V + F + LG A++ A A+G+ GV Sbjct: 58 PLFVQYVSYLKSVAMWDFGPSFKYKGQSVNDLISSGFPVSFTLGAEAILLALALGVLFGV 117 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA+ D+T L + G S+P F +L + S+ L PV+G Sbjct: 118 IAALYHNKWQDYTVAILTIFGISVPSFIMAAVLQYVFSMKLGLFPVAG------------ 165 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 D+ A+ LP+I L ++P+A I R++RSSM+EVL DYIRT Sbjct: 166 -------------------WDSWAYTFLPSIALASMPMAFIARLSRSSMIEVLNSDYIRT 206 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A+AKGL+R V + HA+RNA+LPVVT +G +L G+ + ETIF PGLG ++++ Sbjct: 207 AKAKGLSRPAVTVRHAIRNALLPVVTYMGPMAAQVLTGSFIIETIFGIPGLGAHFVNSIT 266 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ G + + +++L L+VD+LYG+++PRI+ K Sbjct: 267 NRDYTVIMGVTVFFSVILLLCVLIVDVLYGIIDPRIKLSK 306 >UniRef50_A4AG90 Peptide ABC transporter, permease protein n=2 Tax=Actinobacteria (class) RepID=A4AG90_9ACTN Length = 353 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 127/336 (37%), Positives = 200/336 (59%), Gaps = 3/336 (0%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS-PERHAQLLAELGLDKPM 62 ++LRRLG + G+T++TFA +++PGDP+ GE S P + E GLD+P+ Sbjct: 20 YLLRRLGTSVLLLFGVTVVTFALANLVPGDPIAAALGEGAASNPATVEAYIQERGLDQPL 79 Query: 63 WQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY +YI G+ GD+GIS+++ PV + AT+E+ + A++ + VG+ +G LAA Sbjct: 80 PVQYANYIGGLFQGDMGISLRTAQPVASDLAKAVPATVEIALLAIVVSLGVGVALGSLAA 139 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 +RG I D +L G S+P FW ++ + + P +GR+ L +T Sbjct: 140 YRRGKISDQLVRVFSLIGLSIPTFWMALVSFNFFFLQLRIAPGAGRL--SPVLPPPPTVT 197 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 GF +D+ + G+ F DA+AH++LP VL + ++ R R+S+LEVL DY+R RA Sbjct: 198 GFYTVDSLLAGQWVTFTDALAHLMLPVFVLSLFTIGLLTRFVRTSVLEVLDADYVRAGRA 257 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 KGL+ R++ + LR A LP++T++GL GTLL+G +L E +F+WPGLG + ++ D Sbjct: 258 KGLSGSRLLFGYVLRGASLPILTIVGLAFGTLLSGTVLVEAVFAWPGLGSYAYNSATSLD 317 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 P V G L+V + + +N VDLLYGV++PR+R Sbjct: 318 LPGVMGVGLVVGVVYLSINFAVDLLYGVLDPRVRLA 353 >UniRef50_Q2FPT2 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FPT2_METHJ Length = 328 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 177/340 (52%), Gaps = 20/340 (5%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELGL 58 L +I RR+ + +GI++LTF + + P DPV+ G +S E ++ E GL Sbjct: 6 LGYISRRVLQIPLLLVGISILTFLLMFLSPVDPVVAHFGLPIVQKMSDEDIMKVKDEWGL 65 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 ++P+ +Y +I + GD G S + P+ + + + ATL L A A + I Sbjct: 66 NEPLHVRYFSWISHLFQGDFGRSHIYKRPIIDIIIEKLPATLYLSFVAYGVAIVLAILAA 125 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 ++ + G + D + Y+ P F+ ++LI++ SV P S VS V Sbjct: 126 LIVISREGGLIDRIITNTSFLLYAAPSFFIALILILVFSVWLGWLPSSRMVSISVPP--- 182 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 G D + H+ILPA LG A+ RSS+ E + +DYI Sbjct: 183 --------------GFFAELADRIRHIILPAAALGMSHFALFYGYLRSSLSESIKQDYII 228 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG+ ++I HA RN++LP VT +GL + L++G+++ ETIF+WPG+GR DA Sbjct: 229 TARAKGIDERTILIRHAFRNSLLPFVTQLGLAIPWLISGSVVIETIFAWPGIGRLTYDAA 288 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + D+ ++ G L + ++I+ NLL D+ Y +++PR+R++ Sbjct: 289 MKSDFMLLIGLTLFTSILVIIGNLLADIAYAIIDPRVRYE 328 >UniRef50_P77308 Probable D,D-dipeptide transport system permease protein ddpB n=53 Tax=Bacteria RepID=DDPB_ECOLI Length = 340 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 142/332 (42%), Positives = 212/332 (63%), Gaps = 4/332 (1%) Query: 5 ILR-RLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 ILR R ++ G+ ++TF H+IPGDP ++AG+R S + +LGLD+P++ Sbjct: 6 ILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRA-SDAIVENIRQQLGLDQPLY 64 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q+ Y+ + HGDLG S+++ PV EE F ATLEL A++ A +GIP+G+L+AV Sbjct: 65 VQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAV 124 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 R DH +A+TG S P FW G+ +I+L H + P GR+ D + +TG Sbjct: 125 WRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPP--THVTG 182 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 F L+D + G F +A+ H+ILPA+ L + L ++ R RS+MLE L EDYIRTARA Sbjct: 183 FYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARAS 242 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL +++ +AL NA++P +TV+GL +G LL GA+LTET+F+WPG+G W++ ++Q D+ Sbjct: 243 GLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDF 302 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 P V G ++V+ +LVNL+VDLLY ++PRI Sbjct: 303 PAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI 334 >UniRef50_A1T284 Binding-protein-dependent transport systems inner membrane component n=4 Tax=Actinobacteria (class) RepID=A1T284_MYCVP Length = 320 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 111/341 (32%), Positives = 177/341 (51%), Gaps = 27/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP-GDPVMIMAGERGISPERHAQLLAELGLD 59 M +FI RRL ++ I+++ F +++P DP +AG+ P+ A++ A+LGLD Sbjct: 1 MARFIARRLLGMVAVLFAISVIVFLIFNVVPNSDPAARIAGKNA-DPDLIARVNADLGLD 59 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +P+ QY+ + + G L S S V E+ AT L + A + ++ + G Sbjct: 60 QPLPVQYVTMMKQIFTGQL-TSYASNRNVVEQIWEGLPATFSLCIGAAVIWMSLAVLFGY 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+AV G D L+L G SMP+FW +L+ +S L P V Sbjct: 119 LSAVHAGRFADRALTVLSLVGISMPVFWLAAILLYFLSFKVQLFPTGSYVDLTEDP---- 174 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +D H++LP L + + R+ RS+ML+ + EDY+RT Sbjct: 175 -------------------LDWAYHLVLPWFTLAVLFIGFYSRVLRSNMLDAMNEDYVRT 215 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLL-AGAILTETIFSWPGLGRWLIDAL 298 ARAKGL+ +V I H LRN+M+P+VT+ GL G ++ GAILTET+++ PG+G + +A+ Sbjct: 216 ARAKGLSERQVRIRHVLRNSMIPIVTLFGLDFGMVVGGGAILTETVYNLPGVGLYAGEAI 275 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 + D P + + A I+L N +VD+ Y V++PRIR + Sbjct: 276 RSLDLPPLMAVTMFGAFFIVLFNTVVDVAYAVLDPRIRLGE 316 >UniRef50_Q46AX7 ABC transporter, permease protein n=3 Tax=Methanosarcina RepID=Q46AX7_METBF Length = 313 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 202/341 (59%), Gaps = 34/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELG 57 M ++I +RL +V G+TL++F +++ PGDP ++A ER + + + G Sbjct: 1 MWKYITKRLAMVSVVIAGVTLVSFFAMYLAPGDPAELIALERYGQDLDASQIESVREAEG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 LD P++ QY ++ ++H DLG S+ + V EE + + AT+EL V ++ + + +P+ Sbjct: 61 LDAPVYFQYFIWLDHLLHLDLGRSIITSDDVLEEILLKLPATIELTVAGLLISLLIALPI 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G+L+A+++ ++ ++ +L G S+P FW G++LI L S+ ++ P G S Sbjct: 121 GILSALQKNTLLNNCCAFFSLIGISIPNFWLGILLIWLFSLTLHIFPSYGYGS------- 173 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 ++ + LPA+ LG ++ R+TR+S++EV+ ++YI Sbjct: 174 ------------------------LSQLALPALTLGISMSSITARLTRASLMEVMEKEYI 209 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 ARA+G V++ HAL+NA+LPVVT G+Q+G LL GA++ ETIFSWPG+G+ L+D+ Sbjct: 210 LAARARGFDEYTVVLRHALKNALLPVVTFAGMQLGYLLGGAVIVETIFSWPGIGKLLVDS 269 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 + RD+ +VQG VL +A + L +L VD+LY V++PRIR+ Sbjct: 270 IFARDFSMVQGCVLFIAVLFSLSSLAVDILYAVLDPRIRYD 310 >UniRef50_C3WH40 Peptide ABC transporter permease n=6 Tax=Fusobacterium RepID=C3WH40_9FUSO Length = 313 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 99/340 (29%), Positives = 179/340 (52%), Gaps = 33/340 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI--SPERHAQLLAELGL 58 M+++ ++RL +IP G+T LTF +++ P DP+ + + + E+GL Sbjct: 1 MIRYTIKRLLYLIPILFGVTFLTFLMLYLAPSDPISMKYSSMATVGDSKYIEEKKEEMGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + +QY + V+ GD GIS K +PV +E R TL L +++ + P+G Sbjct: 61 NDSFIKQYTRWSKNVLSGDFGISTKYNVPVKDEIAKRLPKTLALTGTSILITIFLAFPLG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A + D+ + TG S+P FW G+ML+ + SV + L P+ G Sbjct: 121 IISAKYKNKWIDYIIRFFSFTGISIPSFWLGLMLMYIFSVRFKLLPIVG----------- 169 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + +ILP++ L +AV +R R+ +LE + +DY+ Sbjct: 170 --------------------SKGIKSLILPSVTLSVWLVAVYIRRIRACILEEINKDYVV 209 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 +KG++ ++++ H L N++L ++T+ G+ +G++L G + ETIF + GLG+ DA+ Sbjct: 210 ALESKGISSSKIMLFHILPNSLLTIITMFGMSIGSILGGTTIIETIFEYRGLGKMAADAI 269 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG V+ A + +++NLLVD+LY +NP+I+ Sbjct: 270 TNRDYFLMQGYVIWTAIIYVVINLLVDILYKYLNPKIKIG 309 >UniRef50_B1KW82 Nickel transport system permease protein NikB n=3 Tax=Clostridium RepID=B1KW82_CLOBM Length = 316 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 191/340 (56%), Gaps = 34/340 (10%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA---GERGISPERHAQLLAELGL 58 L+++ ++L IP IG++L++F + PGDP + + G + L E+GL Sbjct: 5 LKYLFKKLIHSIPVLIGVSLISFTLGILAPGDPALQVLSMDGINQPTETEIFNLREEMGL 64 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 + P+ QY++++ ++GDLG S S PV++E V R T + + ++I A + IP+G Sbjct: 65 NDPLPIQYVNWVKKAINGDLGKSYISGEPVFDELVRRIPVTFSMAIFSVILAILIAIPLG 124 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 V+ AVK+ + D+ +AL S+P FW+ + I + S + P SG Sbjct: 125 VIMAVKKNNYIDNIGRIIALIFISIPGFWFAFISITIFSEKLKILPTSG----------- 173 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 +++ +I+P+ +L + + VI+R+TR+++L+ L ++YI Sbjct: 174 --------------------LESFKSLIMPSFILASGTIGVIMRLTRANVLKELNKNYII 213 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TA +KGL+ +++ HA N++LP+VT+IG +L G + E+IF+ PG+GR++I+ + Sbjct: 214 TAESKGLSYKIIVMKHAFLNSLLPIVTLIGNYFAGILGGTAIIESIFAIPGMGRFVIEGI 273 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQG VL + I+ NLL+DL Y ++NP+IR Sbjct: 274 FNRDYPVVQGYVLFTGIVYIVFNLLIDLSYLILNPKIRLG 313 >UniRef50_A8M8L4 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Actinomycetales RepID=A8M8L4_SALAI Length = 319 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 187/338 (55%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++++ RLG + + +T++ F +H++PG G+ + E+ A E+G D+ Sbjct: 1 MARYLITRLGQALIVVVLVTVIAFLILHLLPGGAARATLGKEA-TLEQLAAFNHEMGYDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQY Y+ ++ GDLG S + V E R T+ L + + + A + IP+GVL Sbjct: 60 PLIQQYGMYVQRLLQGDLGYSYQLNQSVLEAIEQRLPKTMVLSLLSTLLAVVLAIPLGVL 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AV+R D+ L+L Y+ PIF+ G+M+I++ S W + P V ++P Sbjct: 120 QAVRRNRWPDYAITALSLLAYATPIFFLGLMMIIVFSQVWPILPPEAPQGFTVAEVLADP 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 ++LP L + +AV R RSSM++ L E+Y+RTA Sbjct: 180 AG----------------------LVLPTATLAIVTIAVYARYVRSSMIDNLNENYVRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 R+KGL+ RV++ H LRN + PV+T++G+ + L +GA++ E++F++PG+G+ A + Sbjct: 218 RSKGLSERRVVLRHTLRNGLFPVITLLGMYLPALFSGALVVESLFNFPGMGQLFWQAALK 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+P++ G ++++ ++ L+ DLLY V+PR+R + Sbjct: 278 RDFPILLGVTVIISIATVVGALIADLLYATVDPRVRLR 315 >UniRef50_C5ET18 Oligopeptide transport system permease protein appB n=2 Tax=Clostridiales RepID=C5ET18_9FIRM Length = 315 Score = 344 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 194/338 (57%), Gaps = 23/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++I++RL + +PT IGIT++ +A + G P+ +M G R IS A A LGLDK Sbjct: 1 MTKYIIKRLLIALPTLIGITIIDYAIMCFA-GSPLEMMQGAR-ISQAAVAAKEAALGLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P + QY ++ ++ G++G S+KS V TL L ++I + + +P G+ Sbjct: 59 PFYIQYFMWLGQLLQGNMGFSIKSYEAVGSMIGSHLGPTLLLMGVSLIVSLIMSVPAGIY 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 +A+ + S D+ V + G S+P F+ ++L+ + +V + P G V+ Sbjct: 119 SAIHQYSKGDYAVVTASFFGSSIPGFFLSLLLVYIFNVTLGILPSGGMVTL--------- 169 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D AHM++P +VL +R RS++LE+L +DY+RTA Sbjct: 170 ------------GTAGGAGDVAAHMVMPVLVLSVSMAGTNIRYIRSAVLEILQQDYLRTA 217 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKG+ R VI HALRNA++P+VTVIG+Q+ L GA++ E +FSWPGLG + A+ Sbjct: 218 RAKGIGRRLVIYKHALRNALVPIVTVIGMQIPVLFGGAVIVEQLFSWPGLGLMTMSAILN 277 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPV+ G LL A +++L NL+ D++Y VVNP I+++ Sbjct: 278 RDYPVIMGVCLLSAVVVLLANLVTDIVYAVVNPAIQYE 315 >UniRef50_D1Y243 Oligopeptide transport system permease protein AppB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y243_9BACT Length = 354 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 181/340 (53%), Gaps = 26/340 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG----ISPERHAQLLAELGLD 59 F +R + + ++ L+F V+ PGDP+ + ++ A+L +GL+ Sbjct: 35 FAAKRFAQMALVWGLVSALSFFIVYFAPGDPLYVYMTPGATGHKMTEAEMARLRESMGLN 94 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 +QY ++ + GDLG+S+++R PV + R T L +++ + A+ +P+G+ Sbjct: 95 GSALRQYGAWLKRTLRGDLGLSLQNRQPVLPQIAERLPRTAALMGASLLLSLALAVPLGL 154 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +A ++ DH L+ G S P FW G+MLI+L ++ L P + + V Sbjct: 155 IAGTRKHGKADHVISALSYLGISTPSFWLGIMLIILFAMKLRLLPAARFRTIGVR----- 209 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +F D H LPA VL +AV VR R+ + L E+Y++T Sbjct: 210 -----------------SFGDVARHTALPAAVLSLNNIAVFVRYIRAGTIAQLEEEYVQT 252 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A +KGL+R RV+ H L+N +LPVV ++G + GTL+ G+ + ET+FSWPGLG + A+ Sbjct: 253 ALSKGLSRRRVLYGHVLKNCLLPVVAIVGSRFGTLVTGSFIIETVFSWPGLGMLGMSAIN 312 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYP++ G ++ T+++L N D+LY ++PRIR ++ Sbjct: 313 NRDYPMIMGITMISCTLLLLGNFAADVLYRRLDPRIRLEE 352 >UniRef50_A8IB88 ABC transporter permease protein n=34 Tax=Proteobacteria RepID=A8IB88_AZOC5 Length = 335 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 124/338 (36%), Positives = 195/338 (57%), Gaps = 21/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML ++LRR+ +P +G++L+ FA +H+ PGDP+ + G SPE AQ+ A G D+ Sbjct: 19 MLVYVLRRILYTVPIALGVSLVCFALIHLAPGDPLSAII-PEGASPETVAQVRAAYGFDR 77 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL ++ V+ GD G S+ ++ PV E +P TL L A++F A G +GV+ Sbjct: 78 PLPVQYLKWLQHVVMGDFGNSIMTQRPVMAEVLPALANTLMLAAAAVLFGFAAGCLLGVV 137 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 + G D +++TG S+P +W GM+L+++ +V NL P +G Sbjct: 138 SGYLAGKPTDKAVTAVSITGVSIPHYWLGMVLMVIFAVELNLLPATGMGEGG-------- 189 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G G D++ ++ILPA+ L IP +I R R ++ EV +D+++T Sbjct: 190 -----------SGAFGFGWDSLQYLILPALTLSVIPAGIIARSVRGTIAEVRKQDFMQTL 238 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 AKGL R+ VH ++NA+ V+ V+GLQ+ LL G+IL ET+FSWPG G L +A+ Sbjct: 239 HAKGLPGRRI-FVHVVKNALPAVLAVMGLQLAQLLGGSILVETVFSWPGTGFLLNNAIFT 297 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PV+QG +L++A +L+NL VD++ V+PRI+ Sbjct: 298 RDLPVLQGTILVLAMFFVLINLAVDVVQTAVDPRIKRA 335 >UniRef50_Q1R133 Binding-protein-dependent transport systems inner membrane component n=6 Tax=Proteobacteria RepID=Q1R133_CHRSD Length = 308 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 116/335 (34%), Positives = 183/335 (54%), Gaps = 32/335 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ +I +R+ + +G+T +T+ ++MIP DP +AG R + E A + +LGLD Sbjct: 1 MVWYIAKRIAYSLLILLGVTFITYLLLYMIPADPARQIAG-RSATAEVVANIRHQLGLDL 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P ++QY+ Y+ ++ GDLG S R V R TL+L + F +GI +G++ Sbjct: 60 PFYEQYVRYLGNLLQGDLGRSYVQRSEVSTLLAARVGPTLQLMAAGIGFELLIGITLGIV 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA+KR S+ D + + G S P F M+ + +V+ P+ G Sbjct: 120 AALKRNSVLDQVLMAFSFIGVSSPHFIAAMLALYFFAVYLGWFPLGGYG----------- 168 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 V H++LPAI LG + RM RSSM++VL +D+IRTA Sbjct: 169 --------------------GVEHLLLPAITLGVLGSGWYSRMVRSSMIDVLHQDFIRTA 208 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL R+RV++ H L NA++PV+ +IG+ +G ++G ++ E++F WPGLG+ A+Q+ Sbjct: 209 RAKGLGRVRVLLRHVLPNAIVPVIPMIGIDIGIFMSGLVVVESVFGWPGLGQLAWQAIQQ 268 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335 D P++ G +L A I+L NL+ DL V+PRI Sbjct: 269 VDIPIIVGVTMLSAVAIVLGNLVADLAVLFVDPRI 303 >UniRef50_UPI0001C313C7 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313C7 Length = 316 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 120/339 (35%), Positives = 189/339 (55%), Gaps = 24/339 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 M +++ R+ + T +G++++ F V ++PGD + +G+ S E L LGL Sbjct: 1 MARYLASRVAQLGLTLLGVSVVIFLLVRLLPGDVLDASSGDTVAGSSEGRDALREALGLA 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY +I G++ GDLG+S++S P+ TLE+ + + A VGIP+GV Sbjct: 61 DPLPVQYFDWIKGLVTGDLGVSLRSGEPLANLLSTALPMTLEIVLLGVAIALLVGIPLGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 L+AV+ G D+ + + G S+P FW +++++ S + P S +S + Sbjct: 121 LSAVRSGRAIDYVGRAIGMIGVSLPSFWLATLMLLVTSSAFGWVPSSTYISPFEDPLGN- 179 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 +A +ILPA+ + LA+++RM R++MLEVLGEDY+RT Sbjct: 180 ----------------------LAALILPALCISVYMLALVMRMVRATMLEVLGEDYVRT 217 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKG V++ HALRNA+LPV+TV +VG LLA L E +F PGLG L+ + Sbjct: 218 ARAKGAAPRTVVVRHALRNALLPVITVSAFEVGVLLASTALIEVVFGLPGLGNLLVQGIF 277 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY V+Q LL+A +L+NL+ D+LY +V+PR+ + Sbjct: 278 NRDYAVIQTVTLLLAATFVLMNLIADVLYALVDPRVELR 316 >UniRef50_D1A5X3 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5X3_THECD Length = 307 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 123/340 (36%), Positives = 182/340 (53%), Gaps = 37/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLT----FAFVHMIPGDPVMIMAGERGISPERHAQLLAEL 56 M LRR L + + T + FA + GDP + + G PE+ L EL Sbjct: 1 MRTLHLRRTALRLLVLLASTFIALTTAFALGRLS-GDPTVNILGPTA-PPEQREALRHEL 58 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLD+P QYL Y V GD G S++ + R TL+L M A +G+P Sbjct: 59 GLDRPPLTQYLDYFRSVFTGDFGDSLQFYQSNTTLILERLPYTLQLVAAGMTIAVLIGVP 118 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +GVLAA + G+ +D A LAL G S+P+FW GMML+ L +V P + Sbjct: 119 LGVLAATREGTWWDRAASTLALLGQSVPVFWLGMMLVALFAVKLGWLPAGQSGTP----- 173 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 H+ILPA+ + P+A I R+TR+SM E L E + Sbjct: 174 --------------------------RHLILPAVTMSLYPMAHIARLTRASMSEALAEPF 207 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I +ARA+GL+ V+ HA +NA++PV+T++ LQ G L++GA+ E ++SWPGLG+ + Sbjct: 208 IDSARARGLSTAGVVWRHAFKNALMPVLTIVILQTGILMSGAVAIEYVYSWPGLGQLALQ 267 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 A+Q RDYP+VQ V+ A +++NLLVD+++ +V+PR+R Sbjct: 268 AVQFRDYPLVQAIVVFGALTFVVLNLLVDVIHSIVDPRVR 307 >UniRef50_Q11FQ8 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FQ8_MESSB Length = 314 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 117/335 (34%), Positives = 195/335 (58%), Gaps = 23/335 (6%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + + LRRL + I T + + L F + ++PGDPVM++ GE +PE A++ LG+D P Sbjct: 1 MNYYLRRLAVAIATVLISSSLVFFAIRILPGDPVMMLLGESAATPEVIARMAERLGMDAP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY ++ ++ D G S+ + +PV E + R +LEL ++ + ++GIP+GV+A Sbjct: 61 LHVQYFRWLTDLLQLDFGTSIGTGLPVANELIKRLPRSLELMAGGILVSLSIGIPLGVVA 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A + S + A LAL G S P F G++LI++ S+ L P SG + Sbjct: 121 ARRPDSFIGNAASVLALIGLSAPTFVKGLILIIIFSITLGLLPSSGFTPFTQDPAAN--- 177 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + ++ILP++ LG V+ R+TR+S+ E LG+DY+RT R Sbjct: 178 --------------------LRNLILPSLTLGLGFAGVVQRITRASLAETLGKDYVRTVR 217 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKG++ + HAL NAM+PV+ V+G+++G++L G ++ E +F+WPGL +LI+A R Sbjct: 218 AKGVSENASVYRHALPNAMIPVIAVVGIRIGSMLGGMVVIENLFNWPGLSSYLIEACYAR 277 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 DYP +Q ++++ + LV+L +D+L G++NPR R Sbjct: 278 DYPAIQACLVVIFFVFSLVSLSMDVLMGIINPRRR 312 >UniRef50_C7Q7C7 Binding-protein-dependent transport systems inner membrane component n=15 Tax=Actinomycetales RepID=C7Q7C7_CATAD Length = 336 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 181/359 (50%), Gaps = 44/359 (12%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP--GDPVMIMAGE----RGISPERHAQLLA 54 M+ +I+RRL + I+L+TF ++ P G E + +P+ A ++ Sbjct: 1 MISYIIRRLFSAVILLFVISLITFFIFYVFPRLGGQTTESLAEQFVGKTQNPQAIAAVIH 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHG---D------------LGISMKSRIPVWEEFVPRFQAT 99 G D+ +W QY +I G+ G D LG S K+ V + T Sbjct: 61 RFGFDQSVWVQYGRFIKGIFVGYDYDTGTRMSHCPAPCLGYSFKTNNLVTDSIGQWLPVT 120 Query: 100 LELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVH 159 + L V A + G+ VGV +A+K+GS+ D + AL G S+P+++ G +L ++ V+ Sbjct: 121 ISLAVGASVLWLVFGVAVGVASALKKGSVVDRAGMITALVGVSLPVYFVGPLLSLVFVVN 180 Query: 160 WNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAV 219 W++ P G V H++LP I + A+ Sbjct: 181 WHILPDPGYVHITQDP-----------------------WGWFTHLLLPWIAVAFGLAAL 217 Query: 220 IVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAI 279 R+TR ML+ + ED+IRTARAKGL VI HALR A+ P+VT+ G+ +G L G + Sbjct: 218 YARLTRVGMLDTMNEDFIRTARAKGLPERTVIFKHALRAALTPIVTIFGMDLGFALGGVV 277 Query: 280 LTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L E +F+ PG+GR +DA+ + D PV+ G ++ + I+L NL+VDLLYGVV+PR+R Sbjct: 278 LAEQVFNLPGIGREAVDAVGQSDLPVIMGVTIVASAFIVLANLVVDLLYGVVDPRVRVS 336 >UniRef50_A6X1T0 Binding-protein-dependent transport systems inner membrane component n=10 Tax=Bacteria RepID=A6X1T0_OCHA4 Length = 313 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 196/338 (57%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ F+++R+G + T + L F V ++PGDP +++ G++ SP A L +LGLD+ Sbjct: 1 MVSFLIKRMGFALFTLFSVLTLVFVIVRVLPGDPALVILGDQA-SPASIAALHHKLGLDQ 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QY ++ GV+ G+LG SM + + E + T+EL + ++I +G+P GV Sbjct: 60 PIIVQYGSFMLGVLQGNLGTSMITGRSITAEIMNVLPYTMELTIASLILGVLLGVPAGVW 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKR D ++L G S+P F ++L+M+ ++ PV Sbjct: 120 AAVKRNKPADLLLRLVSLLGLSLPAFVAAIILLMIFAIQLRWFPV--------------- 164 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G +D + M LP I L I +A I R+TRS+MLEVL +D++RTA Sbjct: 165 ---------ISSGGGDGLLDRLRQMALPTISLALIMMAYITRVTRSAMLEVLNQDFVRTA 215 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 +AKG + V+ HAL N +P+ TV+GL +G L+ ++LTE +FS PGLG+ +++AL + Sbjct: 216 KAKGASHHAVVWRHALGNCTIPITTVVGLYLGILIGNSVLTEIVFSRPGLGKLILNALTQ 275 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY ++QG +++ M++ VN+L DL YG ++PR+++K Sbjct: 276 RDYTLLQGMIVIYTLMVVAVNMLTDLTYGFLDPRVQYK 313 >UniRef50_B5ICR7 ABC transporter, permease protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICR7_9EURY Length = 352 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 195/346 (56%), Gaps = 11/346 (3%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPER--------HAQLLAE 55 +I+RRL I IGITL+TF +H +P D + AG +P + Sbjct: 6 YIIRRLIFTIFIIIGITLITFILMHALPVDLAAMYAGNPRDNPATEVNEAEMMLKAAREK 65 Query: 56 LGLDKPMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 GLDKP+W QY +Y++ + + D+GISM++ PV EE + R ATLEL +++ A G Sbjct: 66 FGLDKPLWVQYGYYLYNLFLKFDMGISMRTHKPVGEEIINRLPATLELIFVSIVIAFVAG 125 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDM-V 173 + VGV++A K+ DH ++++G S+P FW ++L + P+SGR Sbjct: 126 VAVGVISAKKQNKFTDHIMRIISISGVSLPAFWLAILLQFIFGSWMGWFPISGRYDPQLF 185 Query: 174 FLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLG 233 + +TGF LIDT + G F D H+ILP+I + + P I RMTR+++LEV+ Sbjct: 186 HQYPFHTITGFYLIDTLVQGNFKMFGDVAWHLILPSIAMASYPFGAIARMTRATLLEVMD 245 Query: 234 EDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRW 293 E YI +ARA GL R+I +AL+NA+ P +T+ GL +L GA E IF W G+G + Sbjct: 246 EQYIYSARAMGLP-KRLITKYALKNALGPTLTITGLNFAYMLTGAFYVEWIFGWGGIGWF 304 Query: 294 LIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 AL DY V+ G V++V+ ++VNL+VD++ ++PRI + Sbjct: 305 AGMALLNLDYTVIMGMVVVVSLFYVIVNLIVDIIQVYIDPRITLGE 350 >UniRef50_Q2CJ72 ABC transporter membrane-spanning permease-oligopeptide transport n=7 Tax=Bacteria RepID=Q2CJ72_9RHOB Length = 320 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 190/341 (55%), Gaps = 25/341 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER---GISPERHAQLLAELG 57 ML +I RRL +IP I I+ L + + + PGD V M + PER +L LG Sbjct: 1 MLTYIARRLLTLIPMAIAISFLIYLGLDLTPGDAVSHMIPPDVIGTMDPERLDELRESLG 60 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPV 117 L KP +Y +I GV+ GD G S+ + + + F+ R ATLEL A++ +T +G + Sbjct: 61 LGKPFLVRYWIWITGVLQGDFGYSLAGGVQISKIFLDRLPATLELSCAALVISTILGSIL 120 Query: 118 GVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDD 177 G ++A+ RG+ D + + G S+P F++G++ I++ +++ PV GR Sbjct: 121 GTISALTRGTFADQALTVVGMLGVSIPEFFFGLVAILVFALNLGWLPVGGRTLPGY---- 176 Query: 178 SNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYI 237 +F D + H+I+PA+VL + A ++R RSSML+ L D+I Sbjct: 177 ------------------DSFWDRLPHLIMPALVLSIMMTAGVMRYARSSMLDALSRDFI 218 Query: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297 RTAR+KG+ RV ++H R A+ PV+ +IG ++ L+ G+++ E +F WPG+G+ + A Sbjct: 219 RTARSKGMPEWRVNLLHGFRVALTPVIVLIGFRLPVLIGGSVIIEQVFQWPGIGKEFLSA 278 Query: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ +DYP+V L ++L +L+VD+L +++PR+R Sbjct: 279 VRSQDYPLVMMVALFSVMAVLLASLIVDILTALIDPRVRLG 319 >UniRef50_Q0BY86 Oligopeptide ABC transporter, permease protein n=56 Tax=Bacteria RepID=Q0BY86_HYPNA Length = 323 Score = 342 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 183/338 (54%), Gaps = 28/338 (8%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 + LRRL + IPT + I + F + PG P GER + P A + A+ GLDKP Sbjct: 13 WGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFD---GERKLPPATEAAIAAKFGLDKP 69 Query: 62 MWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + +QY +Y+ GV GD G S K+ V + ++ +G M+ A VG +G+ Sbjct: 70 LHEQYFNYVAGVAQGDFGPSYKTLGKSVNDLISDGLPISMTIGALTMLVALTVGTSLGIF 129 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 A +++ + D+ +G A+ G S+P F G +LI+L+S+ + V G Sbjct: 130 AGLRQNTAADYGVMGFAMFGISVPTFVTGPILILLLSLGAGIFAVGGL------------ 177 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G N + +M LP + L +A+I R+ R+SM+E + ++IRTA Sbjct: 178 ------------GTWPNIGMSWHNMTLPVLTLALPQIAIISRLMRASMIETMRANHIRTA 225 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI+ HAL +A+LP+V+ G + ++ G+++ E IF PGLG + +D Sbjct: 226 RAKGLAERDVIVRHALPSALLPLVSYAGPAMAGVMTGSVVIEKIFGLPGLGSYFVDGALN 285 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDY +V G +++ A +II++NL+ D+LY +++P++++ Sbjct: 286 RDYTLVMGAIIVYAALIIVLNLVADILYAMLDPKVKYD 323 >UniRef50_B9KBE7 Oligopeptide ABC transporter, permease protein n=13 Tax=Bacteria RepID=B9KBE7_THENN Length = 348 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 109/328 (33%), Positives = 179/328 (54%), Gaps = 7/328 (2%) Query: 18 GITLLTFAFVHMIPGDPVMIMAGERGI----SPERHAQLLAELGLDKPMWQQYLHYIWGV 73 G+T + F+ + + D ++ + +PE+ L + GL+ +Y ++ Sbjct: 21 GVTFIVFSMIQSLGPDKLLAAYVNPNMLDKLTPEQMDALKEKYGLNDFFVIRYGKWLLNT 80 Query: 74 MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTA 133 + GDLG S+ + PV + + R T+EL + A+ VGI +GV AAV RG DH Sbjct: 81 LKGDLGWSLVGKEPVKDALLKRLPYTIELALYAIFPVIFVGIWLGVKAAVHRGKFLDHFI 140 Query: 134 VGLALTGYSMPIFWWGMMLIMLVSVHWNLTP---VSGRVSDMVFLDDSNPLTGFMLIDTA 190 A+ G+S P F +G++++M+ N P +S +++ + T + +D Sbjct: 141 RIFAVVGWSFPDFVFGLLVLMIFYSILNWLPPGNLSLWAEEVIRSPEFRRYTKLITVDAL 200 Query: 191 IWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRV 250 + G F D + H+I P I L + A ++R+TRSSMLEVL ++Y+RTARAKGL V Sbjct: 201 LNGRLDVFWDGLKHLIGPIITLSWLWWAYLLRITRSSMLEVLNKEYVRTARAKGLPEDVV 260 Query: 251 IIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGV 310 I HA RNA++PV TV G V L +G ++ ET+F+ G+G + A + DY V Sbjct: 261 INKHAKRNALIPVTTVAGGMVIGLFSGTVIVETVFNRTGVGSFTAQAALQLDYASVMASA 320 Query: 311 LLVATMIILVNLLVDLLYGVVNPRIRHK 338 L +T++++ NL++D+LY +++PRIR Sbjct: 321 LFFSTILVVGNLIIDILYALIDPRIRLG 348 >UniRef50_C7HA74 Glutathione ABC transporter, permease protein GsiC n=2 Tax=Bacteria RepID=C7HA74_9FIRM Length = 323 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 104/342 (30%), Positives = 180/342 (52%), Gaps = 35/342 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA---GERGISPERHAQLLAELG 57 M ++++RRL + IP + I+ + F F+++IP +P + I+ E A + +LG Sbjct: 12 MKRYVVRRLLMAIPLLLAISFVCFCFINLIPSNPAEVALRIQQTPVITEEIIAAMEEQLG 71 Query: 58 LDKPMWQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 L+KP + +Y ++ G +HGD GIS + + V E + ATL+L + + + IP Sbjct: 72 LNKPFFVRYFDWVLGCLHGDFGISYVNPKRTVAGELLRCLPATLQLAGTSFVIVAVLSIP 131 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G L AV +G FD GL +MP +W G++L+ + V N P +G + Sbjct: 132 IGFLCAVYKGGWFDKIMRGLVFVTTAMPAYWVGLLLMWGIGVQLNWLPTNGNGT------ 185 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 H+ILP+ + ++ +R+ R++MLE + +DY Sbjct: 186 -------------------------WRHLILPSFTVALSYISTYIRLIRNNMLENMKQDY 220 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 + A +GL + +++ H L+N+M + +G+ + L++G I+ E +FSWPGLG I Sbjct: 221 VLYANVRGLPQKSILVKHILKNSMHTCIVAMGMSIPQLISGTIVVENVFSWPGLGTLCIS 280 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 ++ RDYPV+Q VLL+ + +L NLL D+L V +PR+R + Sbjct: 281 SIFNRDYPVIQTYVLLIGVLFVLFNLLFDILQTVSDPRLRKE 322 >UniRef50_Q3IF63 Peptide transport protein (ABC superfamily, membrane) n=4 Tax=Alteromonadales RepID=Q3IF63_PSEHT Length = 344 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 127/332 (38%), Positives = 202/332 (60%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 L +ILRR+GL + + +++ TF + PGD + ++G + +H QL + + Sbjct: 3 LDYILRRIGLFVFMVLMLSVFTFLLSFLFPGDALSNLSGIPSNNFAQHTQLEDKYLYNSN 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + QY+ ++ ++ GD G+S S V+ + + ATLEL + A+ + +G+P G+LA Sbjct: 63 YFMQYIAFLGRILQGDWGLSFASGDSVFSQILDLIPATLELSIYALFVSVVIGVPTGILA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 + D + GYSMPIFW ++LIML S+ P+SGR+S + + + Sbjct: 123 SAYYKQWPDKLISSTTMIGYSMPIFWLALLLIMLFSLQLGWFPMSGRMSLLYEIPPTTGF 182 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + + + FIDA+ H+ LP IVL P V++R TR SML+V+ +++I+TAR Sbjct: 183 ILIDISLASFPYQGMAFIDALHHLTLPTIVLAMYPTTVLIRFTRESMLKVMDQNFIKTAR 242 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL R ++II HALRNA+LPV+ IGLQ TL+ A++TE IFSWPG+GRWLID++ +R Sbjct: 243 AKGLNRRQLIIHHALRNALLPVIKQIGLQFSTLITLAMITEIIFSWPGIGRWLIDSIYQR 302 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNP 333 DYP +QGG++ V+ II ++ +L+Y + +P Sbjct: 303 DYPAIQGGLMAVSLFIIFATIIAELIYTLFDP 334 >UniRef50_A6NRE3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NRE3_9BACE Length = 330 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 114/342 (33%), Positives = 190/342 (55%), Gaps = 23/342 (6%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGIS--PERHAQLLAE----L 56 +++L+RL ++ F I++L FA +PGDPV IM G+ + P+ + L + L Sbjct: 5 RYLLKRLVYIVFVFFIISILMFAIYKAMPGDPVEIMLGDSKTTMKPDAYQALYDKTVISL 64 Query: 57 GLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116 GLDKP+ QY+ ++ ++ G+ G S + + V T+ L V M+ A+ IP Sbjct: 65 GLDKPLPVQYVVWMGNMLTGNFGYSTQYKQAVINIIGAPMANTVLLNVLTMVVVFAIAIP 124 Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176 +G++ AV++ IFD + L + GYS+P F ++ I L++V + + P+SG S + Sbjct: 125 LGIVTAVRKNGIFDKSVQVLTIVGYSLPQFIVALLAIFLLAVKFPIFPISGVQSAGLNAT 184 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 F+D HM+LP +V+ + I R R++M++VL DY Sbjct: 185 G-----------------LEWFLDRAWHMVLPVLVMAVSGIGGITRYVRAAMIDVLRMDY 227 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 I+TARAKGL V+ +HA RNA++P+VT+ V L G+I+ E++F WPGLG+ LID Sbjct: 228 IKTARAKGLREKVVVYIHAFRNALIPIVTITTWWVIGLFGGSIVIESVFLWPGLGKMLID 287 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 L +RD+ VV + + + N+++D+ Y +V+PR+R + Sbjct: 288 GLLQRDFAVVLTMQMFYVVLSLAGNVIMDVAYTIVDPRVRLE 329 >UniRef50_C9KNL5 Oligopeptide ABC transporter, permease protein AppB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNL5_9FIRM Length = 314 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 181/341 (53%), Gaps = 32/341 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER--GISPERHAQLLAELGL 58 M ++I++RL +IP GIT LTF+ + D V + + IS + Q AELGL Sbjct: 1 MHRYIIQRLLQLIPILFGITFLTFSLMQFTQDDAVDHLYEQSGAAISEKVKEQKRAELGL 60 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D+P QY H++ G GD+G S S V+E F + T+EL + ++ + IP G Sbjct: 61 DQPFLVQYGHWLKGAATGDMGRSYISGKRVFENFSEKLPMTVELMLVSIAMTLLISIPFG 120 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +L+A ++ ++ D L G S+P F+ ++LI +++ NL P+ G Sbjct: 121 ILSAARQNTMLDLCVRFLTFIGNSLPNFFVALLLIYFLALKLNLFPIMGS---------- 170 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + A + LPA+ L A R R+++LE LG+ Y+ Sbjct: 171 --------------------KENAASVFLPALTLAISMSAKYTRQIRAAVLEELGKPYVA 210 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 AR++G++ ++ LR++ + ++T++ L +G+LL G + ETIF W G+G+ +DA+ Sbjct: 211 GARSRGISEWTILTHSVLRSSFITIITLLALSIGSLLGGTAIVETIFMWDGVGKLAVDAI 270 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDYP++Q V+ ++ + + VNL DLLY ++PR+R+++ Sbjct: 271 LSRDYPLIQAYVVWMSVIYVGVNLAADLLYHALDPRVRYEE 311 >UniRef50_B1XIM7 Binding-protein-dependent transport systems inner membrane protein n=15 Tax=Cyanobacteria RepID=B1XIM7_SYNP2 Length = 344 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 120/335 (35%), Positives = 193/335 (57%), Gaps = 4/335 (1%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +IL RL L + I + F + PGDP + G R A L +LGLD P+W Sbjct: 13 YILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRA-PEATKALLREQLGLDLPLW 71 Query: 64 QQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAA 122 QY+ Y+ ++ DLG S+ S +PVWE F AT+EL + MI A VG VG+LAA Sbjct: 72 LQYVRYLGSLLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLAA 131 Query: 123 VKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLT 182 ++G+ FD + Y++P+FW GM++ ++ SV P+ R + + L+ Sbjct: 132 SRQGTWFDVGGRLFGIITYALPLFWMGMVVQLIFSVQLGWFPLGTRFP--LDVPPPPTLS 189 Query: 183 GFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARA 242 G +D+ + G A+ +++LP LG + + R+ R ++ + L DY+ ARA Sbjct: 190 GLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQSDYVEAARA 249 Query: 243 KGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRD 302 +G+ +++ HAL+NA++PV+TV+GL LL GA+LTE FSWPGLG L +A+ RD Sbjct: 250 RGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAISLRD 309 Query: 303 YPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 YP VQG ++ ++++V+L++D++ +++PRIR+ Sbjct: 310 YPTVQGIMVFFGAIVVVVSLVIDIVNALIDPRIRY 344 >UniRef50_B9K0P3 ABC transporter membrane spanning protein (Oligopeptide) n=3 Tax=Bacteria RepID=B9K0P3_AGRVS Length = 307 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 128/339 (37%), Positives = 204/339 (60%), Gaps = 33/339 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGER-GISPERHAQLLAELGLD 59 ML I +RL + + T + + +L+ +H++PGDPV M + SP+ AQ+ A+LGLD Sbjct: 1 MLVLIFKRLLIALATIVSVIILSGILIHIVPGDPVTAMMAQSVTASPQAMAQMRAKLGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+WQQ Y W V GDLG++++ PV + R T L V + A A+GIP+G Sbjct: 61 LPVWQQVGLYTWHVFQGDLGMTIRGNEPVARLLLQRLPNTFALAVSGLGVALAIGIPLGF 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 LAA+ RG + D + +A+ G S+P FW+G+++I + S+ PV+G Sbjct: 121 LAAIHRGKLTDTAVMVIAVLGVSIPGFWFGLIMIQVFSLKLGWFPVAG------------ 168 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 ++ILPA+ LG A++ RMTRS+++EVL EDYIRT Sbjct: 169 --------------------SGFRNIILPALTLGLTYCALVARMTRSALVEVLAEDYIRT 208 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARA+GL +V++VHAL+ A++ +VTV+GL LL G ++ E +FSW G+GR + A+ Sbjct: 209 ARARGLREYQVLLVHALKPALISIVTVVGLVFAYLLGGQVIIENVFSWNGIGRLAVQAML 268 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYP++QG +++ A+ +++V++L+D+LYG ++PR+R + Sbjct: 269 ERDYPMIQGFIVVFASSVVIVSMLIDILYGFLDPRMRQR 307 >UniRef50_C7QKP4 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKP4_CATAD Length = 315 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 181/338 (53%), Gaps = 25/338 (7%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +++RR I T ++L TF +HM+P M G + +P+ A L +LGLD+ Sbjct: 1 MTTYLIRRFFQSIVTLFIVSLATFGMMHMMPNGVARAMLG-KNYNPQSLAVLNHKLGLDR 59 Query: 61 PMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY H++ + +H DLG S + V + ++ + A++F + +P+GV Sbjct: 60 PLIVQYGHWLDRLALHFDLGYSYQRNQSVNDLLKETLGQSIYIVGLALLFTIVLSVPLGV 119 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 + A +R S+ D+T + GY++P+F+ G++L L V ++L P++ ++ Sbjct: 120 VQATRRNSVTDYTITTFSFIGYAVPVFFLGVVLRDLFQVQFHLIPIANQID--------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 A MILP L +A R RSSML+ L +DY+RT Sbjct: 171 --------------SFHAAFSQPAQMILPVATLVVSGVAGYSRYMRSSMLDELTQDYVRT 216 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 A AKG T+ RV+ H LRNAM+P++T++GL + L+ GA+L E IF+ G+G I+A Sbjct: 217 AIAKGATKRRVLYGHVLRNAMIPMITLVGLSLPALVGGALLVEQIFNIQGIGVLTINAAL 276 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 + D+ +V G +L A + ++ +L+ D+ Y ++PR+R Sbjct: 277 QNDFVIVLGTTMLTALVTVIGSLVADISYAALDPRVRL 314 >UniRef50_C6D1X8 Binding-protein-dependent transport systems inner membrane component n=2 Tax=Paenibacillus RepID=C6D1X8_PAESJ Length = 306 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 189/335 (56%), Gaps = 31/335 (9%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 +I +R+ + G +L FA ++++PGDP M + E+ A L +LG+D+P + Sbjct: 2 YIAQRILSALLVIAGTLVLVFAILYVLPGDPTDSMIDPSVATAEQIANLKHQLGVDQPFY 61 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 Q++ YI ++ GD G S+ + PV ++ + F ATL L + + + +G+ +GVL+AV Sbjct: 62 IQFIRYISDMVQGDFGYSLLNSEPVLDKILEHFPATLALTAASALVSVTIGLVLGVLSAV 121 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 R D+ A + L G SMP FW G++LI+L S+ P G Sbjct: 122 HRNGPIDYLARLVGLFGISMPTFWSGILLIVLFSLQLGWFPAMG---------------- 165 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 D ++LPA+ LG + IVRM RSSML+++ E ++ T R+K Sbjct: 166 ---------------SDGWRTLVLPALTLGIVGAGFIVRMVRSSMLDIIDEHFMLTLRSK 210 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 GL+ V+ HALRNA++P VT+IG+ +G +LAG ++ ET+FS G+GR + DAL +D Sbjct: 211 GLSERAVMYKHALRNALIPAVTMIGMLIGEMLAGTVVIETVFSRQGIGRIIGDALMAKDL 270 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 PVVQG + A + +LVNLLVDL Y +++PR+R Sbjct: 271 PVVQGVIFFTALIYVLVNLLVDLSYSLIDPRVRRS 305 >UniRef50_A7BKM5 Peptide ABC transporter, permease protein n=1 Tax=Beggiatoa sp. SS RepID=A7BKM5_9GAMM Length = 320 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 113/338 (33%), Positives = 183/338 (54%), Gaps = 18/338 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +ILR L ++++ + VH+ PG+P + + PE A++ A LD Sbjct: 1 MWSYILRNLLQRCVLLFIVSVIAHSIVHLAPGEPSEVDPSNPRMQPEDIAKIRAAFHLDD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QQYL+++ ++ G+L S K PV + RF +L L + A + + P G+ Sbjct: 61 PLHQQYLYWMRDLLTGEL-KSFKDSQPVLPKIWDRFMNSLPLFILATLIVWTLAFPTGIH 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAV+RGS +D + +A S+P F+ ++I+ V + + PV G + + Sbjct: 120 AAVRRGSFYDRGSTFIAYALISIPGFFLSYLMILWVVDMFGV-PVIGMRTFGMEDATPLF 178 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +D + H+++P+++ +AV+ R RS MLEV+G+DY+RTA Sbjct: 179 QS----------------MDRIWHLVIPSLMSALAGIAVLSRYVRSQMLEVIGQDYVRTA 222 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RAKGL VI HAL NA+LP VT+ G + L+ G+++ E IF+WPGLGR +A+ Sbjct: 223 RAKGLDEDTVIYRHALSNALLPFVTLFGFLLPGLIGGSVIFEYIFAWPGLGRLGYEAILS 282 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD+PV+ + A + ++ L DLLY VV+PRIR + Sbjct: 283 RDFPVILTINFIAAALTLVGTFLSDLLYAVVDPRIRLE 320 >UniRef50_B1HP02 Oligopeptide ABC transporter permease protein n=2 Tax=Bacillaceae RepID=B1HP02_LYSSC Length = 476 Score = 341 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 181/335 (54%), Gaps = 31/335 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 LQFI+ R+ +G+ L F +++ P DP + G + E+ A GLD+P Sbjct: 167 LQFIIERILQSFIVIVGVATLVFTILYLSPFDPARNLLGVEA-TAEQIANFNRIHGLDQP 225 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 Q H + G+ DLG S + + +F TLE+ V +++ A A+ IPVG+++ Sbjct: 226 YLSQLWHSLSGLFTFDLGTSFAGKEDITHSITNKFPVTLEIAVLSLLMAIAIAIPVGIIS 285 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 AV+ S D+T + +AL G S+P FW G++ I+ ++ P + Sbjct: 286 AVRPNSYLDYTFMFIALIGLSIPSFWQGLIFILTFALKLQWFPAT--------------- 330 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +I+P IVLGT A I RMTRSSMLEV+ EDYI TA+ Sbjct: 331 ---------------YNPQNWLSLIMPVIVLGTSITASIARMTRSSMLEVIHEDYIITAK 375 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL +VI HA+RNAM+P++TVIGL G +L GA +TE +F+ G+G +++D Sbjct: 376 AKGLNEFKVISKHAIRNAMIPIITVIGLLFGGMLGGASVTEKVFNISGIGSYIVDKQFIP 435 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 D P + GGV+ +A I +VNLL+D++Y +PRIR Sbjct: 436 DIPAILGGVVYIAITISIVNLLIDIMYAFFDPRIR 470 >UniRef50_Q98AA8 ABC transporter, permease n=1 Tax=Mesorhizobium loti RepID=Q98AA8_RHILO Length = 329 Score = 341 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 114/338 (33%), Positives = 181/338 (53%), Gaps = 21/338 (6%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE--RGISPERHAQLLAELGLDK 60 + I R + I T + + +L F +IPGDP ++ G ++ E+ GLD+ Sbjct: 8 RHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDR 67 Query: 61 PM-WQQYLHYIWGVMHGDLGISMKS-RIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 P+ Q + Y+ + GDLG S K V + + AT+ L A + A +G+ +G Sbjct: 68 PLFPDQLVDYLSATVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLG 127 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + A +RG D+ A G +L YS P FW M+L+++ S P G S + Sbjct: 128 IYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMILVVIFSTSLGWLPGYGAYSPGGTISFV 187 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + +D + H+ LP + + V + R++M +V+ EDY+ Sbjct: 188 -----------------DSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMV 230 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGLT ++++ HA RNAMLPVVT+I L +G ++AGAI E +F+WPG+G ++AL Sbjct: 231 TARAKGLTNGQMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEAL 290 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 RDYP++QG LL+ I++ NL+ DL YG+++PR+R Sbjct: 291 NARDYPILQGIFLLLGASIVVANLVADLAYGLLDPRVR 328 >UniRef50_A3Y4Z9 Oligopeptide ABC transporter, permease protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y4Z9_9GAMM Length = 313 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 123/338 (36%), Positives = 188/338 (55%), Gaps = 33/338 (9%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 ++I +++ I T I + F + + GDPV+ M + PE Q+ GL+KP Sbjct: 3 ARYIFQKITRAILTLILVVTFIFIILRVT-GDPVVTMLPDD-TDPEIIEQMRIAWGLNKP 60 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 +W+QYL Y G+ GDLG S ++ V R TL L V + +F +G+P GV + Sbjct: 61 IWEQYLDYWVGIFSGDLGHSFLDGRSAVDKIVERIPETLRLTVTSFMFMLLIGVPAGVFS 120 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+KR + D T + L+++G+S+P F+ G++LI++ S+ P +G Sbjct: 121 AIKRNTWIDRTIMTLSVSGFSLPNFFLGILLIIIFSIWLRWLPSAG-------------- 166 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 + +++P I L T VI R RSS+LEVLG+ Y+R A Sbjct: 167 -----------------SERSWSLVMPVITLATAGAGVIARFVRSSVLEVLGKQYVRAAI 209 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 A+G+ RVI+ L NA +PV+T++G +GTL+ G+I+TETIFSWPG+GR LI ++ R Sbjct: 210 ARGMPSHRVILFVVLPNAAIPVITIVGFMIGTLIGGSIVTETIFSWPGVGRLLISSVTAR 269 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 D VVQ G+++VA +IL NLLVD Y +++PRIR Sbjct: 270 DLAVVQTGIMMVAFTMILANLLVDFAYFLIDPRIRLGS 307 >UniRef50_B1HVT9 Permease protein of oligopeptide ABC transporter n=3 Tax=Bacillaceae RepID=B1HVT9_LYSSC Length = 313 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 103/319 (32%), Positives = 185/319 (57%), Gaps = 24/319 (7%) Query: 19 ITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDL 78 ++++TF ++PGDPV M G P + L +ELGLD+P+++QY+ ++ G++ G L Sbjct: 18 VSIITFGVFQILPGDPVRTMLGTEA-DPTQIENLRSELGLDRPLYEQYVDWMKGLLTGQL 76 Query: 79 GISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLAL 138 G S++ +PV + R T+ L ++ + +P+G+ AA ++ I D + + Sbjct: 77 GDSIRFSMPVKDLLFDRLPVTMSLAGITLLIVLVISLPLGMFAARRQNKISDVSLSTVTQ 136 Query: 139 TGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNF 198 G ++P FW GMMLI+ V + ++ +SG + + Sbjct: 137 IGMAVPSFWLGMMLILYVGLQFSFFKISGYIPWTQSVAG--------------------- 175 Query: 199 IDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRN 258 A++ ++LPA+ + +AV R R+++LE + DY+RT R+KG++ V+ H L+N Sbjct: 176 --ALSTLLLPALTIAIPQIAVNFRYVRTAILEQVQLDYVRTIRSKGMSEQNVMYKHVLKN 233 Query: 259 AMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMII 318 +M+P++TV GL + ++AG I+ E +FS PG+G+ LI A+ RD+P+VQG V+ + ++ Sbjct: 234 SMIPILTVFGLIMAEVVAGTIIVEQVFSLPGIGQLLITAISNRDFPLVQGIVMYITVAVV 293 Query: 319 LVNLLVDLLYGVVNPRIRH 337 ++N +VD+LY V++PRIR Sbjct: 294 MINFIVDILYSVLDPRIRL 312 >UniRef50_C0ZIB9 Dipeptide ABC transporter permease protein n=35 Tax=Bacteria RepID=C0ZIB9_BREBN Length = 312 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 115/340 (33%), Positives = 188/340 (55%), Gaps = 34/340 (10%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 ML F+ RR +I T I LTF +H +PG P + ++ A L A LDK Sbjct: 1 MLSFVFRRFISMIVTLWLIITLTFFLMHAVPGSPFEK--EGKALNEAVAANLNAYYNLDK 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMK-SRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 P+ QY Y+ ++ DLG S+ S V + F + +LG+ +++FA GI +GV Sbjct: 59 PLLVQYGLYLQKLVQFDLGPSIANSSDTVNKMIARGFPVSFQLGLISVVFAIVTGIALGV 118 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 +AA++ + D+ A+ +A+ G S+P F +LI ++V W L P + S Sbjct: 119 IAALRHNRLIDYLAMIIAVIGISVPSFVVASLLIKYMAVEWKLLPTATWGS--------- 169 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 H+I+PA+ L P+A+I R+TR++MLEVL ++YI T Sbjct: 170 ----------------------WQHVIMPALALAFGPIAIIARLTRTNMLEVLTQEYIET 207 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 ARAKGL+ +++ HALRNA+LPVVT++G + +L G+ + E IF+ PG+G++ + + Sbjct: 208 ARAKGLSPATIVLKHALRNAILPVVTLLGALIANVLTGSFVIEKIFAIPGMGKYFVAGIN 267 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY V+ G + + ++I + +VD+LYG+++PRI+ + Sbjct: 268 NRDYSVIMGTTVFYSALLIFLMFVVDVLYGIIDPRIKLHR 307 >UniRef50_B6JJM3 Inner membrane ABC transporter permease protein YddR n=5 Tax=Bacteria RepID=B6JJM3_OLICO Length = 309 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 132/338 (39%), Positives = 193/338 (57%), Gaps = 33/338 (9%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M+ ++ +RL + +G+ L F +H+ GDP ++ S E A +G + Sbjct: 1 MISYLAKRLLQALLVLLGVMTLVFFLLHLS-GDPTQLLLPMDA-SAEERAAFRLRMGFND 58 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+ QYL + + V+ G+LG S + P + AT +L A++ AT + +P+GV+ Sbjct: 59 PLPLQYLRFAYDVITGNLGFSYRHSEPAVYMVLDHLPATFQLTGSALLIATCLAVPIGVI 118 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AAVKRGS D A+GLAL G +MP++W G+MLI+L SV P GR Sbjct: 119 AAVKRGSALDSIAMGLALLGQAMPVYWLGLMLILLFSVQLQWLPSGGR------------ 166 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 + +ILPA L +A I R+TRS ML+VL +DYIRTA Sbjct: 167 -------------------SGLETLILPAATLAVFSMARIARLTRSGMLDVLSQDYIRTA 207 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ VI LRNA +P++TVIGL+ G LL GA++TETIF+WPG+GR +D++ Sbjct: 208 RAVGIPTRTVIFKFGLRNAAIPLITVIGLEFGVLLGGAVITETIFAWPGVGRLAVDSIFA 267 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RDYPVVQ VL++A++ +L+N+ VD+LY ++PRIR Sbjct: 268 RDYPVVQAVVLVLASIFVLINITVDVLYTYMDPRIREG 305 >UniRef50_Q73QP9 Oligopeptide/dipeptide ABC transporter, permease protein n=1 Tax=Treponema denticola RepID=Q73QP9_TREDE Length = 320 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 180/337 (53%), Gaps = 17/337 (5%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M ++IL+R T I + + F +++ PG+P+ M G+ + E+ L + GL+K Sbjct: 1 MKKYILKRSFSAFITIIVVFTINFIIINIAPGNPIKTMMGKETDNIEQTKALEEKYGLNK 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 P+++QY Y+ + GDLGIS+ PV + + + T+ L + A + + +G +G++ Sbjct: 61 PLYEQYFRYLKNISTGDLGISIIYNKPVSKMILEKIGPTILLVLTAAVISLLLGTAMGIV 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K G D + G+ ++P FW +MLI+L S P G Sbjct: 121 AARKEGGFIDVSLSGINYVLNALPSFWLALMLIILFSTKLKWLPTFGMTDPRAGYTGIK- 179 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 D + H+ILP L I L + R+ +SS+L+V ED+I T Sbjct: 180 ----------------YIKDVIIHLILPITTLVLIELPLYFRIAKSSVLQVTNEDFIMTL 223 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA G+ ++ + +NA+LP +TV G+ + L+ G L E +F+WPG GR +++A+ + Sbjct: 224 RAAGMNEKKIFRKYIFKNAILPTITVFGISLAYLITGVALIEIVFAWPGTGRLVLNAINQ 283 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 RDYPV+ G L+++ I ++ ++VD++Y +V+PRIR+ Sbjct: 284 RDYPVLMGIYLIMSIAIAVMMMVVDIVYAIVDPRIRY 320 >UniRef50_B0NEG2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG2_EUBSP Length = 330 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 184/335 (54%), Gaps = 24/335 (7%) Query: 4 FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMW 63 + +R+ G + T + +++LTF ++PGDPV I+ G P + A L ELGLDKP+ Sbjct: 19 YAVRKAGTFVITLVLVSILTFGVFQILPGDPVDIILGVEA-DPMQAAALTKELGLDKPIM 77 Query: 64 QQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAV 123 ++Y +++G + GDLG S++ ++PV + T L V +++ + +P V A Sbjct: 78 ERYFDWVFGAVRGDLGNSIRYQVPVGDLLKSSLPVTASLAVLSILLTILISVPAAVFLAK 137 Query: 124 KRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTG 183 + G ++P FW G++LIML +V +++ P Sbjct: 138 NHRKNSAMVLSSVTQFGIAVPSFWIGILLIMLFAVQFHILPSGDYTPFSENP-------- 189 Query: 184 FMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAK 243 I+ + +ILPA + A I+R ++++L+ +G DY+RTAR+K Sbjct: 190 ---------------IEWLKSLILPACSIAVGTTATIIRYLKNTILDQMGFDYVRTARSK 234 Query: 244 GLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDY 303 G+T+ +V+ H L+NA+LP +T++G+ + +L G+++ E +F+ PG+G L + RD+ Sbjct: 235 GMTQKQVLFKHVLKNALLPAITILGMMIVDVLGGSVIVENVFNLPGIGHLLTSGVGNRDF 294 Query: 304 PVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 P+VQG V +A ++++NLLVD LY VV+PRIR Sbjct: 295 PLVQGLVFYLAITVLVINLLVDFLYTVVDPRIRVG 329 >UniRef50_Q46B30 Oligopeptide ABC transporter, permease protein n=4 Tax=Methanomicrobia RepID=Q46B30_METBF Length = 314 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 111/340 (32%), Positives = 182/340 (53%), Gaps = 35/340 (10%) Query: 3 QFILRRLGLVIPTFIGITLLTFAFVHMIPGDPV----MIMAGERGISPERHAQLLAELGL 58 + IL RL +I +GI+L+TF + + PGDP G E A L E+GL Sbjct: 4 RIILNRLFQMIQVMVGISLITFTVISLSPGDPAEITLRATLGTESPPKEAVAILHKEMGL 63 Query: 59 DKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 D P + YL +I V+HGDLG S +++ EE T L +M+F+ + IP+G Sbjct: 64 DDPWYVSYLKWISRVVHGDLGYSYQTKRSTLEEIRHALPTTFYLASLSMLFSAIIAIPLG 123 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 + AA+++ DH ++ S P ++ ++ +++ ++ ++ PV+G Sbjct: 124 IAAALRQNGPVDHLCRLTSIVCLSSPEYFIAIVFMLIGGIYLDIFPVAGTG--------- 174 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + ILP++ L A+ +R+ R+SM+E L +DYIR Sbjct: 175 ----------------------GIEYFILPSLTLSIGLTAITMRIMRTSMIETLEQDYIR 212 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKGL+R +++ HAL+NA+LPV+ +G Q G + GA+ ETIF+ PGLG L++++ Sbjct: 213 TARAKGLSRRKIVQRHALKNALLPVIIYMGTQFGWIFGGAVTIETIFALPGLGMLLVNSV 272 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D V+QG +L A +I+L+NL VDL ++P +R + Sbjct: 273 SSMDIMVMQGCMLTFAVIIVLINLFVDLAQLYLDPSVRAQ 312 >UniRef50_B9JSV0 ABC transporter membrane spanning protein (Oligopeptide) n=15 Tax=Alphaproteobacteria RepID=B9JSV0_AGRVS Length = 336 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 124/357 (34%), Positives = 192/357 (53%), Gaps = 40/357 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M + +RRL IPT + I+ + FA + M P +P+ + I PE Q+ A LGLD+ Sbjct: 1 MFTYTIRRLLFAIPTLLIISFIIFALLAMAPNNPLGDL--PLTIPPEVREQMRAALGLDQ 58 Query: 61 PMWQQYLHYIWGVM-----------HG-------DLGI-SMKSRIPVWEEFVPRFQATLE 101 PM ++ ++ G L + S +R PV + V R TL Sbjct: 59 PMIVRFFLWLKQFFINEPLNIFEQITGLTVGSGQRLRVLSWTTRSPVVDLIVQRMPQTLW 118 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 + + +F + IP+GV++A K+ SIFD +++ GYS+P F+ G++LI++ S + Sbjct: 119 VVGLSYVFGVLLAIPLGVISAYKQYSIFDQIGTFVSMVGYSVPTFFTGVLLIVIFSSTLH 178 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 P + + +F+ V M+LP +VL + I Sbjct: 179 WFPS-------------------VYDTNLQVVDWTSFVAQVKQMVLPVMVLTLYNTSQIS 219 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ +GAI+T Sbjct: 220 RFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIFSGAIIT 279 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 E IF GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 EQIFRVNGLGQLLITAIQSGDLPLVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 336 >UniRef50_C7G7D5 Oligopeptide ABC transporter, permease protein AppB n=2 Tax=Firmicutes RepID=C7G7D5_9FIRM Length = 328 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 23/345 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGE--RGISPER----HAQLLA 54 ML+++ +R+ +I F ++++ F + +PGD + +S E + + Sbjct: 1 MLKYVGKRILYMIGVFFVVSIILFVLFNNVPGDRALNQVQNLRGKVSDETFQLRYQEARE 60 Query: 55 ELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVG 114 +LGLD P+ +Y+ ++ ++ GDLG S + V + T+++ + + I A A+ Sbjct: 61 KLGLDDPIPVRYVKWMGNLLKGDLGYSSFYKKDVKDCLSTPLLNTIQINIVSTILALAIT 120 Query: 115 IPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 IP+G+ AV++ S FD+T L + GYSMP + ++ I + +V P+SG + Sbjct: 121 IPLGIHCAVRKFSKFDNTVQVLTIVGYSMPQYIVALVFIFVFAVKLGWFPISGMNTPNFQ 180 Query: 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGE 234 +D + ++ LP IV+ L + R R++M++ L Sbjct: 181 GTGV-----------------AFVLDRLHYLALPVIVMTVAALGSMTRYVRAAMIDALRM 223 Query: 235 DYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWL 294 DYIRTARAKGL VI HA RNA+LPV+T+I ++ G+I+ E IF G+G+ Sbjct: 224 DYIRTARAKGLKEKVVIYSHAWRNALLPVITLIISWFMSIFMGSIVIEQIFQLNGIGKMY 283 Query: 295 IDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 L +DY + +L + +L NL+ DL YG+V+PR+R K Sbjct: 284 YVGLMNQDYDMALAVNMLYCIITLLSNLITDLSYGLVDPRVRIDK 328 >UniRef50_UPI0001C31B38 binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31B38 Length = 322 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 117/340 (34%), Positives = 195/340 (57%), Gaps = 22/340 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIP-GDPVMIMAGERGISPERHAQLLAELGLD 59 M+++++RR + + ++LLTF +++P GDP ++ AG R SPE AQ+ +LGLD Sbjct: 1 MIRYVVRRALWSLVLLLFVSLLTFVLFYVLPSGDPALLRAG-RNASPEALAQIRRQLGLD 59 Query: 60 KPMWQQYLHYIWGV-MHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVG 118 +P+ QY ++ + +H DLG S + PV R AT+ L + A++ A+ IP+G Sbjct: 60 EPLPVQYWTFLKALVLHFDLGYSWYNDAPVKSLIADRLPATISLTLGAVVLWLAIAIPIG 119 Query: 119 VLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDS 178 +++A+ R + D +G AL S P++W G++ + L + P Sbjct: 120 IVSALHRRTWADRLFMGGALIAVSAPVYWVGLVALYLFADDIGQFP-------------- 165 Query: 179 NPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238 + + + ++LP +VL AV RM R S++E + D++R Sbjct: 166 -----LLPGANSYVALTDDPGAWFGALLLPWLVLAGAFAAVYARMLRGSLIETMSLDFVR 220 Query: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298 TARAKG++ RV++ H +R A+ PVVT++G+ +G LL GAIL ET+F+ PG+GR DA+ Sbjct: 221 TARAKGISERRVVLRHGVRVAITPVVTLLGVDIGVLLGGAILVETVFNIPGIGRLGFDAI 280 Query: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 D+PV+QG VLL A +++ NL+VDL+Y +++PR+R+ Sbjct: 281 DHADFPVIQGTVLLAALCVVVANLVVDLVYALLDPRVRYD 320 >UniRef50_Q28KP0 Binding-protein-dependent transport systems inner membrane component n=6 Tax=Alphaproteobacteria RepID=Q28KP0_JANSC Length = 321 Score = 339 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 126/340 (37%), Positives = 196/340 (57%), Gaps = 24/340 (7%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELGLD 59 + ++LRRL + +G+++ F + ++PGD + M G G ++P + L A GLD Sbjct: 1 MSYLLRRLAVFPLVMLGVSIFVFVAIRLVPGDAITAMLGTEGGMLTPAQREALTAYFGLD 60 Query: 60 KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119 + QY+ ++ G+ GDLGIS+ PV + + RF TL+L + +M+ A +G+P GV Sbjct: 61 QNWAIQYVRWLGGLFGGDLGISVTYGQPVLDLILERFPLTLQLALMSMVIALLIGLPAGV 120 Query: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179 AA + D A+ G SMP F ++LI +SV + + P GR Sbjct: 121 FAATQANRASDLIVRIFAMIGQSMPNFVVALLLIYGLSVVFGVLPTMGRY---------- 170 Query: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239 + + +A MILPA LGT A + R+TR++ML++L EDY+RT Sbjct: 171 ------------VRFTEDPLGNLAQMILPAFALGTAFAAAVTRITRAAMLDILSEDYVRT 218 Query: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299 AR++G ++ VI HAL NA++PV+T+ G++ G LL GA++ E IF+ PGLGR ++DA+ Sbjct: 219 ARSQGFSQAYVIWRHALPNALIPVLTLSGVEFGYLLGGAVIVEQIFALPGLGRVVLDAIG 278 Query: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK 339 RDY +VQG +L +A ++VNLLVDL Y ++PRIR+ Sbjct: 279 ERDYALVQGVILFIAFNFMVVNLLVDLAYAALDPRIRYGS 318 >UniRef50_B2KE39 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE39_ELUMP Length = 341 Score = 339 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 187/342 (54%), Gaps = 5/342 (1%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M +FILRRL ++ +G T L F + + E +++ + GL Sbjct: 1 MFKFILRRLIMLPFVMLGATFLLFLLTQTLSPQMRASLYIEDPRQMGSLEEVIEKYGLRD 60 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 +++QY ++ ++ G+ G S + +PV + AT+EL + M G+ +GV+ Sbjct: 61 NVFKQYGRWLGNIVKGEFGYSPTANMPVAKAIKKYLPATIELALITMALVIFFGVWLGVV 120 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFL----D 176 +AV + D+ L++ +S+PIF G++L+M+ GR S L Sbjct: 121 SAVNKNRWQDNLIRMLSVATFSLPIFVLGLILLMIFYGKMGWF-APGRYSFASDLIIYGP 179 Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236 TG +L+D+ + G+ F DA+ H+ILPA+ L A+++R+ RSSMLE L +DY Sbjct: 180 GFKQHTGLLLVDSLLNGQMSVFWDALRHLILPAVTLCAGSFALMIRVMRSSMLEELDKDY 239 Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296 IRTARAKGL ++ HA +NA++PV+T+ +Q LL G ++ ETIF++PG+GR+ + Sbjct: 240 IRTARAKGLKEKDIVYKHAAKNAVIPVITLSSIQFIRLLGGTVIVETIFAFPGIGRFGVA 299 Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 Q+ D + G +VA + ++ NL+ D+LY +PRIR++ Sbjct: 300 CAQQLDIAGILGFSCMVAFLFVIGNLMADILYTAFDPRIRYE 341 >UniRef50_B9JKG6 Peptide ABC transporter n=7 Tax=Bacteria RepID=B9JKG6_AGRRK Length = 336 Score = 339 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 125/357 (35%), Positives = 191/357 (53%), Gaps = 40/357 (11%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M F LRRL +PT + I+ + FA + + P +P + I PE Q+ A LGLD+ Sbjct: 1 MFNFTLRRLFFAVPTLLVISFVIFALLDLAPNNPTGDL--PLTIPPEVREQIRAALGLDQ 58 Query: 61 PMWQQYLHYIWGVM-----------HG-DLGI-------SMKSRIPVWEEFVPRFQATLE 101 P +YL ++ G G S +R PV + V R TL Sbjct: 59 PFLIRYLRWLHQFFINEPLNILEQITGWQFGDGHRLRVLSWATRSPVVDLVVQRMPQTLW 118 Query: 102 LGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWN 161 + + +F + IP+GVL+A K+ SIFD +++ GYS+P F+ G++LI++ S + + Sbjct: 119 VVGLSYLFGVLLAIPIGVLSAYKQYSIFDQIGTFISMVGYSVPTFFTGVLLIVVFSSYLH 178 Query: 162 LTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIV 221 P + + +F+ V M LP +VL ++ I Sbjct: 179 WFPS-------------------VYDTNLRVTDWSSFVAQVKQMFLPVMVLTLYNVSHIS 219 Query: 222 RMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILT 281 R R+SML+ L +DY+RTARAKG+ V++VH LRN+++PVVTVI L V T+ +GAI+T Sbjct: 220 RFVRASMLDNLHQDYVRTARAKGVKEKTVLLVHVLRNSLIPVVTVIALGVPTIFSGAIIT 279 Query: 282 ETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 E +F GLG+ LI A+Q D P+VQ + A +I+L NL+ D+LYG+++PRIR+ Sbjct: 280 EQVFRVNGLGQLLIVAVQGGDIPMVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD 336 >UniRef50_A0QRE3 Dipeptide transport system permease protein DppB n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRE3_MYCS2 Length = 319 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 200/338 (59%), Gaps = 22/338 (6%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60 M I RL + G++L+ F + ++PGDP + + G G + E A L ELGLD+ Sbjct: 1 MTATIRNRLLSTLLVLFGVSLIVFLLLQLVPGDPAVTILG-SGATAEAVAALRTELGLDR 59 Query: 61 PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120 + Q+ Y+ G++ GDLG S+ PV + +PRF T+ L V A+I V +P+GV+ Sbjct: 60 ALPIQFFDYLGGLVRGDLGRSLTVNAPVADIMLPRFANTIILTVAALILCIVVAVPLGVI 119 Query: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180 AA K+ SIFD ++ ++L G S+P++W+G++LI +V P SG + Sbjct: 120 AAHKQYSIFDRVSMMVSLAGASVPVYWFGLLLIGAFAVTLGWLPTSGMYNPRF------- 172 Query: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240 G F D +AH++LPAI +PLAVI RMTRS M+++L +DYIRT Sbjct: 173 --------------PGGFTDLLAHLVLPAIAAALVPLAVIARMTRSVMIDILQQDYIRTL 218 Query: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300 RA GL+ V+ HALRNA+ P+V +IGLQVG LL G + E +F WPGLG+ L ++ + Sbjct: 219 RASGLSTNSVLWRHALRNALPPIVNIIGLQVGYLLGGVVFVEVVFGWPGLGQQLYTSITQ 278 Query: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHK 338 RD PVVQ GVL +A +++NLL D G+++PR R K Sbjct: 279 RDIPVVQAGVLFIALAFVIINLLADGAVGLLDPRTRRK 316 >UniRef50_A9EXW6 Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bacteria RepID=A9EXW6_9RHOB Length = 313 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 190/336 (56%), Gaps = 27/336 (8%) Query: 2 LQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKP 61 +Q+IL+RL L+ TF + ++ F V ++PGDP + +AG+R S A + LGL++P Sbjct: 4 IQYILKRLALMAVTFFLVMIIIFLLVRLLPGDPAIAIAGDRA-SDADLAAIRERLGLNQP 62 Query: 62 MWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLA 121 + Q+ ++ + GDLG S+ R PV + R TL L A++ + + P+ +A Sbjct: 63 LVIQFWQFLSNTVQGDLGRSILMRAPVMDVIANRLPTTLFLTTYAVVLSVLIAGPLAFVA 122 Query: 122 AVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPL 181 A+ RG D + G SMP+F+ G++L+ ++ PV G Sbjct: 123 ALNRGRWPDAVIRTVFQVGLSMPVFYIGLILLTFLAAQLRWFPVGGYGD----------- 171 Query: 182 TGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTAR 241 +F++ + H+ LP++ + A+I+R RS+++EV+ +Y+ AR Sbjct: 172 ---------------SFVERLYHLFLPSVAVALYTSAIIMRNLRSAIVEVVDAEYVEFAR 216 Query: 242 AKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRR 301 AKGL+ +++ H LRNA++ VT++GL +G L++G ++TET+F+ PG+GR +++A+ R Sbjct: 217 AKGLSAWQILGRHVLRNALISTVTLLGLSIGNLMSGTLVTETVFAVPGVGRLMLEAIFAR 276 Query: 302 DYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337 DYP++QG L A ++ +V LL DL+ ++PR+R Sbjct: 277 DYPLIQGLTLTFAVLVSIVFLLTDLIQSALDPRMRL 312 >UniRef50_A9B400 Binding-protein-dependent transport systems inner membrane component n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B400_HERA2 Length = 355 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 111/362 (30%), Positives = 184/362 (50%), Gaps = 31/362 (8%) Query: 1 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMA----GERGISPERHAQLLAEL 56 M +++RRL I I + + ++ + PG P+ + + SPE + + L Sbjct: 1 MTVYLIRRLFQAILVLILSSAVIYSLFALAPGGPLEELTQVTDPKNRPSPEDIQRQIKLL 60 Query: 57 GLDKPMWQQYLHYI------------------WGVMHGDLGISMKSRI--PVWEEFVPRF 96 G DKP + Y ++ G++ D G S K + PV E + Sbjct: 61 GADKPWFLWYPTWLAGDTWMDKIGFEEYQGERKGILRWDWGTSWKFQRNKPVLEIIGDKL 120 Query: 97 QATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLV 156 TL L + + I + +GIP+GV +AV++ S FD+ + G S+P FW+G+++I Sbjct: 121 PDTLWLMISSTIISLVLGIPLGVFSAVRQYSFFDYVLTTFSFIGLSLPAFWFGLLII--- 177 Query: 157 SVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIP 216 +V +G + ++ T + G + +D V H+++P VL + Sbjct: 178 AVSL-WFKRNGWFYFPAGDILALRNYEVPILGTVVAG---SLLDRVMHLVMPVTVLSMLN 233 Query: 217 LAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA 276 LA R R+SMLEVL +DY+RTARAKG+ VI HA RNA++P++T+I + + Sbjct: 234 LANWSRFMRASMLEVLSQDYVRTARAKGVKERVVIYKHAFRNALIPLITIIVFAIPGVFG 293 Query: 277 GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336 GA+ TET+F++ LG I AL +DYP+ +L+ + +++ LL D+LY +V+PRIR Sbjct: 294 GALFTETVFNYKALGFTFISALNLKDYPLAMAFLLISSILLVFATLLADVLYTIVDPRIR 353 Query: 337 HK 338 Sbjct: 354 LD 355 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.198 0.699 Lambda K H 0.267 0.0607 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,440,506,499 Number of Sequences: 3077464 Number of extensions: 254748835 Number of successful extensions: 1114953 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5059 Number of HSP's successfully gapped in prelim test: 3440 Number of HSP's that attempted gapping in prelim test: 1086802 Number of HSP's gapped (non-prelim): 16513 length of query: 339 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 210 effective length of database: 643,403,500 effective search space: 135114735000 effective search space used: 135114735000 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.5 bits) S2: 95 (40.6 bits)