18/01/2012 14:18:22 : INFO  : Run start: Wed Jan 18 14:18:19 GMT 2012
18/01/2012 14:18:34 : INFO  : Initialised job
18/01/2012 14:18:38 : INFO  : Renaming log file 'phyre2_20120118_141818.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/36767ccb59c4d678/phyre_20120118_141818.log'
18/01/2012 14:18:41 : INFO  : Initialised job:
Sequence
>batch____
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE

18/01/2012 14:18:44 : INFO  : Checked sequence
18/01/2012 14:18:50 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 14:18:53 : INFO  : PSI-BLAST 3 iterations
18/01/2012 14:22:31 : INFO  : PSI-BLAST 5 iterations
18/01/2012 14:27:42 : INFO  : Finished PSI-BLAST
18/01/2012 14:27:48 : INFO  : Running Buildali to generate a3m file
18/01/2012 16:13:58 : INFO  : Converting to HMM
18/01/2012 16:14:39 : INFO  : Calibrating HMM
18/01/2012 16:15:10 : INFO  : Searching HMM database
18/01/2012 16:27:54 : INFO  : Finished buildali
18/01/2012 16:27:57 : INFO  : Predicting secondary structure
18/01/2012 16:28:13 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 16:28:16 : INFO  : Predicting Disordered regions
18/01/2012 16:28:24 : INFO  : Predicted Disorder (Disopred)
18/01/2012 16:28:27 : INFO  : Running memsat_svm check
18/01/2012 16:38:21 : INFO  : Globular protein
18/01/2012 16:38:24 : INFO  : Predicted Transmembrane (memsat_svm) ID '36767ccb59c4d678'
18/01/2012 16:38:28 : INFO  : Initialising fold library search
18/01/2012 16:38:34 : INFO  : Initialised search input
18/01/2012 16:38:38 : INFO  : Building Ensemble models
18/01/2012 16:38:44 : INFO  : Building hh.c1oywA_.model.1.pdb
18/01/2012 16:39:13 : INFO  : Building hh.c2rrdA_.model.2.pdb
18/01/2012 16:39:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/36767ccb59c4d678/hh.c2rrdA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/36767ccb59c4d678/c2rrdA_.125.pdb
18/01/2012 16:39:48 : INFO  : Building hh.d1wuda1.model.3.pdb
18/01/2012 16:40:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/36767ccb59c4d678/hh.d1wuda1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/36767ccb59c4d678/d1wuda1.126.pdb
18/01/2012 16:40:21 : INFO  : Building c1oywA_.1.pdb
18/01/2012 16:40:51 : INFO  : Building c2v1xB_.2.pdb
18/01/2012 16:41:23 : INFO  : Building c2xgjA_.3.pdb
18/01/2012 16:41:53 : INFO  : Building c3l9oA_.4.pdb
18/01/2012 16:42:23 : INFO  : Building c1gm5A_.5.pdb
18/01/2012 16:42:53 : INFO  : Building c1gl9B_.6.pdb
18/01/2012 16:43:23 : INFO  : Building c2eyqA_.7.pdb
18/01/2012 16:43:52 : INFO  : Building c4a4zA_.8.pdb
18/01/2012 16:44:22 : INFO  : Building c1hv8B_.9.pdb
18/01/2012 16:44:55 : INFO  : Building c2db3D_.10.pdb
18/01/2012 16:45:26 : INFO  : Building c1s2mA_.11.pdb
18/01/2012 16:45:57 : INFO  : Building c2va8A_.12.pdb
18/01/2012 16:46:27 : INFO  : Building c2zj2A_.13.pdb
18/01/2012 16:46:58 : INFO  : Building c1xtkA_.14.pdb
18/01/2012 16:47:27 : INFO  : Building c3bxzA_.15.pdb
18/01/2012 16:47:57 : INFO  : Building c3pexA_.16.pdb
18/01/2012 16:48:25 : INFO  : Building c3ewsA_.17.pdb
18/01/2012 16:48:55 : INFO  : Building c2hxyC_.18.pdb
18/01/2012 16:49:24 : INFO  : Building c3i5yA_.19.pdb
18/01/2012 16:49:53 : INFO  : Building c3rc8A_.20.pdb
18/01/2012 16:51:56 : INFO  : Finished HH model building
18/01/2012 16:51:59 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 16:53:16 : INFO  : html domain output complete ID '36767ccb59c4d678'
18/01/2012 20:19:44 : INFO  : Run end  : Wed Jan 18 20:19:42 GMT 2012
