Phyre 2 alignment of P15043 with c1szpC_

Return to main results | Retrieve Phyre Job Id

Job Description | P15043
Confidence | 72.16% | Date | Thu Jan 5 11:34:25 GMT 2012
Rank | 377 | Aligned Residues | 22
% Identity | 27% | Template | c1szpC_
PDB info | PDB header:dna binding protein | Chain: C: PDB Molecule:dna repair protein rad51; | PDBTitle: a crystal structure of the rad51 filament
Resolution | 3.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |  | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query Sequence |  | G | R | D | C | L | V | V | M | P | T | G | G | G | K | S | . | L | C | Y | Q | I | P | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | I | T | E | L | F | G | E | F | R | T | G | K | S | Q | L | C | H | T | L | A | V
Template Known Secondary structure |  | S | S |  |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions