BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (112 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=En...   231   5e-60
UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citroba...    57   2e-07
UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter ro...    56   3e-07
UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersini...    47   2e-04
UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae Rep...    46   3e-04
UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8...    40   0.020
UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterob...    39   0.051

>UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=Enterobacteriaceae
           RepID=YAFU_ECOLI
          Length = 112

 Score =  231 bits (589), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 112/112 (100%), Positives = 112/112 (100%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC
Sbjct: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112
           TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
Sbjct: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112


>UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citrobacter
           RepID=C1MDD9_9ENTR
          Length = 292

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFAC-VSFGFPVILVGGAIL---LTGI 58
           SE D+   LG+ +MDVAK +++  V+ ++GS    A  + F    + V G I+   + G 
Sbjct: 181 SEHDVAALLGNVTMDVAKVIVSVFVSQSVGSTLGLAVPLLFSSAAVPVWGEIVGVVVLGF 240

Query: 59  VCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDK 93
           + T  LNE+D +  LS+KL   IR+GLK +Q +++
Sbjct: 241 IITWSLNEVDNKYELSDKLIACIREGLKERQRIEE 275


>UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter rodentium ICC168
           RepID=D2TLL9_CITRO
          Length = 288

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
           S+ DLV+FL D +MD+AKAV++G V   IG   +     F FPVI     I++ G++   
Sbjct: 191 SDYDLVDFLVDITMDMAKAVVSGVV---IGVTITGLLAIFSFPVIATTTIIVIMGLILNK 247

Query: 63  VLNEIDAQCHLSEKLKYAIRDGLKRQQELD 92
            LN  D +  LS +LK  +RD +   +  D
Sbjct: 248 SLNITDDKAGLSRELKNKLRDYIYNHRSYD 277


>UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersinia
           pseudotuberculosis YPIII RepID=B1JIT0_YERPY
          Length = 290

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  E DLV+F G+ +MD AK  ++ GVA  + S  +   ++ G  V+++   I + GI  
Sbjct: 183 LKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGIGV 242

Query: 61  TVVLNEIDAQCHLSEKLKYAIRD 83
             +L  ID +  +S+K+   IR+
Sbjct: 243 AFLLYYIDDEFEISQKIIDFIRN 265


>UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae RepID=A4TMS6_YERPP
          Length = 233

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 7/104 (6%)

Query: 4   ERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVV 63
           E  L  F+G+ +MD+AK  I    +  +G L + A V  G  +I+V G     G V T +
Sbjct: 131 EYTLAEFIGNITMDMAKIAIVAATSFIVGVLFT-ATVLAGGSIIVVAGVAFAVGFVATAI 189

Query: 64  LNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           L+  D +  +SEKL   +       +E+ K  R     F  +LN
Sbjct: 190 LDHFDEKYGISEKLIALL------TKEMRKKPRTQEANFQSILN 227


>UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8457
           RepID=A3GL18_VIBCH
          Length = 371

 Score = 40.0 bits (92), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 4   ERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVV 63
           E+ + +F+G    D+ K +IA    T + ++A+    + G P+I+ G A    G V ++ 
Sbjct: 293 EKTMEDFVGRSGTDITKGLIA----TGVSTVAAIVASTVGAPIIVSGLAFAAVGFVVSLA 348

Query: 64  LNEIDAQCHLSEKLKYAIRD 83
           L+E D    +SE L   +++
Sbjct: 349 LDEFDNSFGVSESLVEKLKE 368


>UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae
           RepID=B2Q0R0_PROST
          Length = 293

 Score = 38.9 bits (89), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
             +E  LV+F  + +MD+AK  I+  + TAI    + A +  G  VILV   +   G+  
Sbjct: 186 FKNEYTLVDFFVNITMDMAKLAISTQITTAITGGLTTAALMTGTSVILVALGVFAVGVSV 245

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQE 90
            V+L  +D +  +S  +   ++    R+ E
Sbjct: 246 GVLLYWLDDEFQISATIIKGLKTHRARKPE 275


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=En...   157   1e-37
UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citroba...   113   1e-24
UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae Rep...   113   1e-24
UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter ro...   109   3e-23
UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersini...   108   6e-23

Sequences not found previously or not previously below threshold:

UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterob...    72   7e-12
UniRef50_A7FL16 Putative uncharacterized protein n=5 Tax=Enterob...    68   8e-11
UniRef50_B1JRP9 Putative uncharacterized protein n=12 Tax=Entero...    64   1e-09
UniRef50_C9CZC7 Putative uncharacterized protein n=1 Tax=Silicib...    51   1e-05
UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8...    51   1e-05
UniRef50_A4SSB1 Putative uncharacterized protein n=1 Tax=Aeromon...    45   0.001
UniRef50_A7MYK5 Putative uncharacterized protein n=2 Tax=Vibrio ...    44   0.001
UniRef50_B1J8W6 Putative uncharacterized protein n=1 Tax=Pseudom...    44   0.002
UniRef50_Q87SF1 Putative membrane protein n=2 Tax=Vibrio parahae...    44   0.002
UniRef50_A3Y531 Putative membrane protein n=1 Tax=Marinomonas sp...    43   0.004
UniRef50_A6VUI5 Putative uncharacterized protein n=1 Tax=Marinom...    39   0.055
UniRef50_Q2SDY9 Putative uncharacterized protein n=1 Tax=Hahella...    38   0.083
UniRef50_A9BWK6 Putative uncharacterized protein n=1 Tax=Delftia...    38   0.091

>UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=Enterobacteriaceae
           RepID=YAFU_ECOLI
          Length = 112

 Score =  157 bits (396), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 112/112 (100%), Positives = 112/112 (100%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC
Sbjct: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112
           TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
Sbjct: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112


>UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citrobacter
           RepID=C1MDD9_9ENTR
          Length = 292

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFAC-VSFGFPVILVGGAIL---LT 56
             SE D+   LG+ +MDVAK +++  V+ ++GS    A  + F    + V G I+   + 
Sbjct: 179 FKSEHDVAALLGNVTMDVAKVIVSVFVSQSVGSTLGLAVPLLFSSAAVPVWGEIVGVVVL 238

Query: 57  GIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKW 94
           G + T  LNE+D +  LS+KL   IR+GLK +Q +++ 
Sbjct: 239 GFIITWSLNEVDNKYELSDKLIACIREGLKERQRIEER 276


>UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae RepID=A4TMS6_YERPP
          Length = 233

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
              E  L  F+G+ +MD+AK  I    +  +G L + A V  G  +I+V G     G V 
Sbjct: 128 FKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFT-ATVLAGGSIIVVAGVAFAVGFVA 186

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           T +L+  D +  +SEKL   +       +E+ K  R     F  +LN
Sbjct: 187 TAILDHFDEKYGISEKLIALL------TKEMRKKPRTQEANFQSILN 227


>UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter rodentium ICC168
           RepID=D2TLL9_CITRO
          Length = 288

 Score =  109 bits (272), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
             S+ DLV+FL D +MD+AKAV++G V   IG   +     F FPVI     I++ G++ 
Sbjct: 189 FKSDYDLVDFLVDITMDMAKAVVSGVV---IGVTITGLLAIFSFPVIATTTIIVIMGLIL 245

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELD 92
              LN  D +  LS +LK  +RD +   +  D
Sbjct: 246 NKSLNITDDKAGLSRELKNKLRDYIYNHRSYD 277


>UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersinia
           pseudotuberculosis YPIII RepID=B1JIT0_YERPY
          Length = 290

 Score =  108 bits (269), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 49/97 (50%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  E DLV+F G+ +MD AK  ++ GVA  + S  +   ++ G  V+++   I + GI  
Sbjct: 183 LKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGIGV 242

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRE 97
             +L  ID +  +S+K+   IR+  +  +       E
Sbjct: 243 AFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDE 279


>UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae
           RepID=B2Q0R0_PROST
          Length = 293

 Score = 71.6 bits (174), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
             +E  LV+F  + +MD+AK  I+  + TAI    + A +  G  VILV   +   G+  
Sbjct: 186 FKNEYTLVDFFVNITMDMAKLAISTQITTAITGGLTTAALMTGTSVILVALGVFAVGVSV 245

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPF 102
            V+L  +D +  +S  +      GLK  +      R+  TP+
Sbjct: 246 GVLLYWLDDEFQISATII----KGLKTHRA-----RKPETPY 278


>UniRef50_A7FL16 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae
           RepID=A7FL16_YERP3
          Length = 287

 Score = 68.2 bits (165), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFP-VILVGGAILLTGIV 59
           +  E  L +F  + ++D AK  ++ GVA    +LA+   V+ G    I +   I   G++
Sbjct: 181 LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL 240

Query: 60  CTVVLNEIDAQCHLSEKLKYAIR 82
            +++L  +D +  +SE +   I+
Sbjct: 241 ASLILYWLDNEYKISETIIKNIK 263


>UniRef50_B1JRP9 Putative uncharacterized protein n=12 Tax=Enterobacteriaceae
           RepID=B1JRP9_YERPY
          Length = 93

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 16  MDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSE 75
           MD+AK  +A   +  +GS+ + A    G  VI V  A+ + G+  T+ L+ +D +  +S 
Sbjct: 1   MDMAKIAVASATSFLLGSVLT-AVGFLGGSVIAVAFAVFVLGVAITIGLDFLDKKYGISV 59

Query: 76  KLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           K+   ++      + ++   R       Y+LN
Sbjct: 60  KIIALLK------KAMEIHPRTPEANLQYILN 85


>UniRef50_C9CZC7 Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B
           RepID=C9CZC7_9RHOB
          Length = 252

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 7   LVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNE 66
           L   LG  + DV K  ++ G     G            PVI      ++ GI  +++L+ 
Sbjct: 146 LTQLLGTIASDVGKFAVSAGAGFLAGMAVGALTTIAAGPVIA----AVIVGIGVSILLDR 201

Query: 67  IDAQCHLSEKLKYAIRDGL 85
           +D +  L+E L  AI D +
Sbjct: 202 VDRKFGLTETLVRAIEDTV 220


>UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8457
           RepID=A3GL18_VIBCH
          Length = 371

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
            E+ + +F+G    D+ K +IA GV+T    +AS      G P+I+ G A    G V ++
Sbjct: 292 DEKTMEDFVGRSGTDITKGLIATGVSTVAAIVASTV----GAPIIVSGLAFAAVGFVVSL 347

Query: 63  VLNEIDAQCHLSEKLKYAIRD 83
            L+E D    +SE L   +++
Sbjct: 348 ALDEFDNSFGVSESLVEKLKE 368


>UniRef50_A4SSB1 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida
           subsp. salmonicida A449 RepID=A4SSB1_AERS4
          Length = 347

 Score = 44.7 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTG-IV 59
           +  E  +V+   +  +D+ K    G +A  +G +A+    +   P IL+ G +     IV
Sbjct: 265 LKDEVTMVDLFSNVGVDLVK----GTLANGVGIIAAGVVATVFGPGILLTGTVFALATIV 320

Query: 60  CTVVLNEIDAQCHLSEKLKYAIR 82
              +++  D +  LSE +K A++
Sbjct: 321 AGKLIDFADEEAELSEMMKQAVK 343


>UniRef50_A7MYK5 Putative uncharacterized protein n=2 Tax=Vibrio harveyi
           RepID=A7MYK5_VIBHB
          Length = 449

 Score = 44.3 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 4   ERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILL----TGIV 59
           E+++  FLG   +  AK  ++G ++  +  LA        F V+L  G + L       +
Sbjct: 329 EQNIAEFLGALGITTAKLFVSGVISMLV--LAFAVMYLGSFGVVLSAGILFLSIAGVSFL 386

Query: 60  CTVVLNEIDAQCHLSEKLKYAIRDGLKR-------QQELDKWKRE 97
               ++ +D +  + +K+K  ++D            +++DK KR+
Sbjct: 387 VGWGIDALDTKYEVKDKVKLFLKDAFPGLTIENMINKDIDKNKRD 431


>UniRef50_B1J8W6 Putative uncharacterized protein n=1 Tax=Pseudomonas putida W619
           RepID=B1J8W6_PSEPW
          Length = 338

 Score = 43.9 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
            E  + +  G   +++ KA IA  V  A+G            PVI     +   G     
Sbjct: 181 DEHVMSDLFGGIGVELVKAGIATAVGYAVGLALGTMATFAAAPVIAGAAVVFAVG----W 236

Query: 63  VLNEIDAQCHLSEKLKYAIRDGLKRQQELDKW 94
            LN +D +  +   +K  +R  +   Q L + 
Sbjct: 237 GLNVLDTEYGIKNSVKAGLRYAVDNIQYLQQQ 268


>UniRef50_Q87SF1 Putative membrane protein n=2 Tax=Vibrio parahaemolyticus
           RepID=Q87SF1_VIBPA
          Length = 263

 Score = 43.5 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%)

Query: 6   DLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLN 65
            L++  G  + D+ K  I+  +A       S A   F      +  AI    +V   +LN
Sbjct: 159 TLLSLFGTITSDIIKLGISSAIAAIAVKGISGATTIFALTSGPLFLAI-GVSLVVGNILN 217

Query: 66  EIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
            ID +  +++K K A+   L    + ++ +  ++    Y+ N
Sbjct: 218 HIDNKYEITQKFKLALEKTLNESLKKEEMRINDVIGRSYIKN 259


>UniRef50_A3Y531 Putative membrane protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y531_9GAMM
          Length = 613

 Score = 42.7 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTG-IV 59
           ++ E+ +V+F G  ++D+ K +   G+A  IG+  +          ILV G I     + 
Sbjct: 534 VNDEKTMVDFFGYSALDIIKGIAVTGLA--IGAAMTL------GSTILVSGVIFAFASLT 585

Query: 60  CTVVLNEIDAQCHLSEKLKYAIRD 83
              +++ +D +  +S+K+    ++
Sbjct: 586 LGFIIDGLDNEYGVSDKIVQEFKE 609


>UniRef50_A6VUI5 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6VUI5_MARMS
          Length = 428

 Score = 38.9 bits (89), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 6   DLVNFLGDFSMDVAKAVIAGGVA---TAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
           D  +      ++++K V++  +    TAIG +   A V+   PV LV     +  I    
Sbjct: 335 DWSDLFVGLGVEMSKMVVSAIIGSALTAIGLVLVGAVVTMTAPVWLVISVGAVASIAVGA 394

Query: 63  VLNEIDAQCHLSEKLKYAIRDGLKRQQE 90
           ++N +D    + + +K A+ +     ++
Sbjct: 395 IINAVDDHYGIKKGIKKAVNNNNSFTRD 422


>UniRef50_Q2SDY9 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SDY9_HAHCH
          Length = 256

 Score = 38.1 bits (87), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  +R L   +G  + D+ K  I+   A+A              P++      +   I  
Sbjct: 142 VDEQRTLSRLIGTIASDLVKLGISSVFASAAAVTIGTLTTIAAGPLLAAVVVGVAVSI-- 199

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQ 88
              L  ID +  L++ L   I D     
Sbjct: 200 --FLEHIDDEFGLTDALVKLIDDSYDNT 225


>UniRef50_A9BWK6 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1
           RepID=A9BWK6_DELAS
          Length = 310

 Score = 38.1 bits (87), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLAS-FACVSFGFPVILVGGAILLTGIV 59
            + E+ + + +G   ++  KA +A  V  +IG   +  A      P+  +  A+ ++GIV
Sbjct: 183 FNDEKTMHDLVGGIGVEAVKAGLATMVGISIGGAFAASATTLAILPLTFMALAVFVSGIV 242

Query: 60  CTVVLNEIDAQCHLSEKLKYAIR 82
               LNE D    +   +  A++
Sbjct: 243 ----LNETDKFFEIKRNVISALK 261


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=En...   127   1e-28
UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersini...   106   2e-22
UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae Rep...   100   2e-20
UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citroba...    96   4e-19
UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterob...    93   2e-18
UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter ro...    93   3e-18
UniRef50_A7FL16 Putative uncharacterized protein n=5 Tax=Enterob...    88   8e-17
UniRef50_Q87SF1 Putative membrane protein n=2 Tax=Vibrio parahae...    83   3e-15
UniRef50_B1J8W6 Putative uncharacterized protein n=1 Tax=Pseudom...    78   9e-14
UniRef50_A7MYK5 Putative uncharacterized protein n=2 Tax=Vibrio ...    72   4e-12
UniRef50_B1JRP9 Putative uncharacterized protein n=12 Tax=Entero...    72   6e-12
UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8...    72   7e-12
UniRef50_A4SSB1 Putative uncharacterized protein n=1 Tax=Aeromon...    69   7e-11
UniRef50_C9CZC7 Putative uncharacterized protein n=1 Tax=Silicib...    66   4e-10

Sequences not found previously or not previously below threshold:

UniRef50_A3Y531 Putative membrane protein n=1 Tax=Marinomonas sp...    55   8e-07
UniRef50_Q6LS06 Putative uncharacterized protein n=1 Tax=Photoba...    53   3e-06
UniRef50_A9BWK6 Putative uncharacterized protein n=1 Tax=Delftia...    52   6e-06
UniRef50_UPI0001AF3CE5 hypothetical protein Psyrpo1_25075 n=1 Ta...    52   8e-06
UniRef50_A3GNG0 Putative uncharacterized protein n=1 Tax=Vibrio ...    49   3e-05
UniRef50_A6VUI5 Putative uncharacterized protein n=1 Tax=Marinom...    47   2e-04
UniRef50_Q2SDY9 Putative uncharacterized protein n=1 Tax=Hahella...    47   2e-04
UniRef50_C9PDS9 Putative uncharacterized protein n=1 Tax=Vibrio ...    47   3e-04
UniRef50_B7VS78 Putative uncharacterized protein n=2 Tax=Vibrio ...    46   3e-04
UniRef50_D0IIP2 Putative uncharacterized protein n=1 Tax=Vibrio ...    46   3e-04
UniRef50_A6VUI7 Putative uncharacterized protein n=1 Tax=Marinom...    45   0.001
UniRef50_A1TM04 Putative uncharacterized protein n=4 Tax=Comamon...    44   0.002
UniRef50_A6ASX7 Putative uncharacterized protein n=1 Tax=Vibrio ...    44   0.002
UniRef50_D0IJ16 Putative uncharacterized protein n=1 Tax=Vibrio ...    40   0.025
UniRef50_B9TKL3 Putative uncharacterized protein (Fragment) n=1 ...    38   0.094

>UniRef50_P77354 Putative inner membrane protein yafU n=20 Tax=Enterobacteriaceae
           RepID=YAFU_ECOLI
          Length = 112

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 112/112 (100%), Positives = 112/112 (100%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC
Sbjct: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112
           TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
Sbjct: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI 112


>UniRef50_B1JIT0 Putative uncharacterized protein n=1 Tax=Yersinia
           pseudotuberculosis YPIII RepID=B1JIT0_YERPY
          Length = 290

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 49/97 (50%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  E DLV+F G+ +MD AK  ++ GVA  + S  +   ++ G  V+++   I + GI  
Sbjct: 183 LKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGIGV 242

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRE 97
             +L  ID +  +S+K+   IR+  +  +       E
Sbjct: 243 AFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDE 279


>UniRef50_A4TMS6 Membrane protein n=32 Tax=Enterobacteriaceae RepID=A4TMS6_YERPP
          Length = 233

 Score =  100 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
              E  L  F+G+ +MD+AK  I    +  +G L + A V  G  +I+V G     G V 
Sbjct: 128 FKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFT-ATVLAGGSIIVVAGVAFAVGFVA 186

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           T +L+  D +  +SEKL   +       +E+ K  R     F  +LN
Sbjct: 187 TAILDHFDEKYGISEKLIALL------TKEMRKKPRTQEANFQSILN 227


>UniRef50_C1MDD9 Putative uncharacterized protein n=2 Tax=Citrobacter
           RepID=C1MDD9_9ENTR
          Length = 292

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFAC-VSFGFPVILVGG---AILLT 56
             SE D+   LG+ +MDVAK +++  V+ ++GS    A  + F    + V G    +++ 
Sbjct: 179 FKSEHDVAALLGNVTMDVAKVIVSVFVSQSVGSTLGLAVPLLFSSAAVPVWGEIVGVVVL 238

Query: 57  GIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYV 105
           G + T  LNE+D +  LS+KL   IR+GLK +Q +++   + +     +
Sbjct: 239 GFIITWSLNEVDNKYELSDKLIACIREGLKERQRIEERNIQRLGYRSSL 287


>UniRef50_B2Q0R0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae
           RepID=B2Q0R0_PROST
          Length = 293

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 9/102 (8%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
             +E  LV+F  + +MD+AK  I+  + TAI    + A +  G  VILV   +   G+  
Sbjct: 186 FKNEYTLVDFFVNITMDMAKLAISTQITTAITGGLTTAALMTGTSVILVALGVFAVGVSV 245

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPF 102
            V+L  +D +  +S  +   ++             R+  TP+
Sbjct: 246 GVLLYWLDDEFQISATIIKGLK---------THRARKPETPY 278


>UniRef50_D2TLL9 Putative membrane protein n=1 Tax=Citrobacter rodentium ICC168
           RepID=D2TLL9_CITRO
          Length = 288

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
             S+ DLV+FL D +MD+AKAV++G V   IG   +     F FPVI     I++ G++ 
Sbjct: 189 FKSDYDLVDFLVDITMDMAKAVVSGVV---IGVTITGLLAIFSFPVIATTTIIVIMGLIL 245

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELD 92
              LN  D +  LS +LK  +RD +   +  D
Sbjct: 246 NKSLNITDDKAGLSRELKNKLRDYIYNHRSYD 277


>UniRef50_A7FL16 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae
           RepID=A7FL16_YERP3
          Length = 287

 Score = 88.2 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFP-VILVGGAILLTGIV 59
           +  E  L +F  + ++D AK  ++ GVA    +LA+   V+ G    I +   I   G++
Sbjct: 181 LKDEYGLADFFVNLTLDAAKLGVSIGVAWGAKALATGFMVAGGSVLAIAIAIGIFTIGVL 240

Query: 60  CTVVLNEIDAQCHLSEKLKYAIR 82
            +++L  +D +  +SE +   I+
Sbjct: 241 ASLILYWLDNEYKISETIIKNIK 263


>UniRef50_Q87SF1 Putative membrane protein n=2 Tax=Vibrio parahaemolyticus
           RepID=Q87SF1_VIBPA
          Length = 263

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
           ++  L++  G  + D+ K  I+  +A       S A   F      +  AI    +V   
Sbjct: 156 NKTTLLSLFGTITSDIIKLGISSAIAAIAVKGISGATTIFALTSGPLFLAI-GVSLVVGN 214

Query: 63  VLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           +LN ID +  +++K K A+   L    + ++ +  ++    Y+ N
Sbjct: 215 ILNHIDNKYEITQKFKLALEKTLNESLKKEEMRINDVIGRSYIKN 259


>UniRef50_B1J8W6 Putative uncharacterized protein n=1 Tax=Pseudomonas putida W619
           RepID=B1J8W6_PSEPW
          Length = 338

 Score = 77.8 bits (190), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
              E  + +  G   +++ KA IA  V  A+G            PVI     +   G   
Sbjct: 179 FGDEHVMSDLFGGIGVELVKAGIATAVGYAVGLALGTMATFAAAPVIAGAAVVFAVG--- 235

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKW 94
              LN +D +  +   +K  +R  +   Q L + 
Sbjct: 236 -WGLNVLDTEYGIKNSVKAGLRYAVDNIQYLQQQ 268


>UniRef50_A7MYK5 Putative uncharacterized protein n=2 Tax=Vibrio harveyi
           RepID=A7MYK5_VIBHB
          Length = 449

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 4   ERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILL----TGIV 59
           E+++  FLG   +  AK  ++G ++  +  LA        F V+L  G + L       +
Sbjct: 329 EQNIAEFLGALGITTAKLFVSGVISMLV--LAFAVMYLGSFGVVLSAGILFLSIAGVSFL 386

Query: 60  CTVVLNEIDAQCHLSEKLKYAIRDGLKR-------QQELDKWKRE 97
               ++ +D +  + +K+K  ++D            +++DK KR+
Sbjct: 387 VGWGIDALDTKYEVKDKVKLFLKDAFPGLTIENMINKDIDKNKRD 431


>UniRef50_B1JRP9 Putative uncharacterized protein n=12 Tax=Enterobacteriaceae
           RepID=B1JRP9_YERPY
          Length = 93

 Score = 71.7 bits (174), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 16  MDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSE 75
           MD+AK  +A   +  +GS+ + A    G  VI V  A+ + G+  T+ L+ +D +  +S 
Sbjct: 1   MDMAKIAVASATSFLLGSVLT-AVGFLGGSVIAVAFAVFVLGVAITIGLDFLDKKYGISV 59

Query: 76  KLKYAIRDGLKRQQELDKWKRENMTPFMYVLN 107
           K+   ++      + ++   R       Y+LN
Sbjct: 60  KIIALLK------KAMEIHPRTPEANLQYILN 85


>UniRef50_A3GL18 Paar motif family n=1 Tax=Vibrio cholerae NCTC 8457
           RepID=A3GL18_VIBCH
          Length = 371

 Score = 71.7 bits (174), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
            E+ + +F+G    D+ K +IA GV+T    +AS      G P+I+ G A    G V ++
Sbjct: 292 DEKTMEDFVGRSGTDITKGLIATGVSTVAAIVASTV----GAPIIVSGLAFAAVGFVVSL 347

Query: 63  VLNEIDAQCHLSEKLKYAIRD 83
            L+E D    +SE L   +++
Sbjct: 348 ALDEFDNSFGVSESLVEKLKE 368


>UniRef50_A4SSB1 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida
           subsp. salmonicida A449 RepID=A4SSB1_AERS4
          Length = 347

 Score = 68.6 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTG-IV 59
           +  E  +V+   +  +D+ K    G +A  +G +A+    +   P IL+ G +     IV
Sbjct: 265 LKDEVTMVDLFSNVGVDLVK----GTLANGVGIIAAGVVATVFGPGILLTGTVFALATIV 320

Query: 60  CTVVLNEIDAQCHLSEKLKYAIRDGLK 86
              +++  D +  LSE +K A++   +
Sbjct: 321 AGKLIDFADEEAELSEMMKQAVKAKFE 347


>UniRef50_C9CZC7 Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B
           RepID=C9CZC7_9RHOB
          Length = 252

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 7   LVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNE 66
           L   LG  + DV K  ++ G     G            PVI      ++ GI  +++L+ 
Sbjct: 146 LTQLLGTIASDVGKFAVSAGAGFLAGMAVGALTTIAAGPVIA----AVIVGIGVSILLDR 201

Query: 67  IDAQCHLSEKLKYAIRDGLKR 87
           +D +  L+E L  AI D +  
Sbjct: 202 VDRKFGLTETLVRAIEDTVDS 222


>UniRef50_A3Y531 Putative membrane protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y531_9GAMM
          Length = 613

 Score = 54.7 bits (130), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLT-GIVCT 61
            E+ +V+F G  ++D+ K +   G+A                  ILV G I     +   
Sbjct: 536 DEKTMVDFFGYSALDIIKGIAVTGLAIGAAMTL--------GSTILVSGVIFAFASLTLG 587

Query: 62  VVLNEIDAQCHLSEKLKYAIRDGL 85
            +++ +D +  +S+K+    ++ +
Sbjct: 588 FIIDGLDNEYGVSDKIVQEFKERV 611


>UniRef50_Q6LS06 Putative uncharacterized protein n=1 Tax=Photobacterium profundum
           RepID=Q6LS06_PHOPR
          Length = 240

 Score = 53.2 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +     L + + D S+ + K  I+  V     +           PV L     ++ G+  
Sbjct: 129 LKDRFLLNDLVADLSVSLIKIGISSIVGAIFATGVGAITTIAAAPVAL----AIVVGLAA 184

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFM 103
           +  L+ +D +  ++EKL   + D   +Q     W+ E+   + 
Sbjct: 185 SYALDRLDKEYRITEKLAKLLEDKAMKQSMKTAWEVEDKLRWQ 227


>UniRef50_A9BWK6 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1
           RepID=A9BWK6_DELAS
          Length = 310

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSL-ASFACVSFGFPVILVGGAILLTGIV 59
            + E+ + + +G   ++  KA +A  V  +IG   A+ A      P+  +  A+ ++GIV
Sbjct: 183 FNDEKTMHDLVGGIGVEAVKAGLATMVGISIGGAFAASATTLAILPLTFMALAVFVSGIV 242

Query: 60  CTVVLNEIDAQCHLSEKLKYAIR 82
               LNE D    +   +  A++
Sbjct: 243 ----LNETDKFFEIKRNVISALK 261


>UniRef50_UPI0001AF3CE5 hypothetical protein Psyrpo1_25075 n=1 Tax=Pseudomonas syringae pv.
           oryzae str. 1_6 RepID=UPI0001AF3CE5
          Length = 323

 Score = 51.6 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
            + ER   +      +++ KA IA  +  A G  A    V+   PV+ V   +L+ GI  
Sbjct: 180 FNDERVWSDLFAGVGVELIKAGIATAIGYAAGVAAGAFFVTAALPVVTVAIVVLVVGI-- 237

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKW 94
              LNE+D + ++   +K  +R  +    EL + 
Sbjct: 238 --GLNELDNRYNIKSSVKSGMRYAVDNVAELHEK 269


>UniRef50_A3GNG0 Putative uncharacterized protein n=1 Tax=Vibrio cholerae NCTC 8457
           RepID=A3GNG0_VIBCH
          Length = 284

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  E  L     + S D+AK  IA G     G+    A +     V+L G          
Sbjct: 204 LRDEATLAELGVNMSADLAKGFIALG-----GAALFTASLPATVGVLLTGLVFAGVSFGL 258

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLK 86
              L+EID     S+ +  A+ +  +
Sbjct: 259 GYALDEIDKNMEYSKSITEAVEEYFQ 284


>UniRef50_A6VUI5 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6VUI5_MARMS
          Length = 428

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 1   MSSERDL---VNFLGDFSMDVAKAVIAGGVA---TAIGSLASFACVSFGFPVILVGGAIL 54
              E  +    +      ++++K V++  +    TAIG +   A V+   PV LV     
Sbjct: 327 FMDEDTVGDWSDLFVGLGVEMSKMVVSAIIGSALTAIGLVLVGAVVTMTAPVWLVISVGA 386

Query: 55  LTGIVCTVVLNEIDAQCHLSEKLKYAIRD 83
           +  I    ++N +D    + + +K A+ +
Sbjct: 387 VASIAVGAIINAVDDHYGIKKGIKKAVNN 415


>UniRef50_Q2SDY9 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SDY9_HAHCH
          Length = 256

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 3   SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTV 62
            +R L   +G  + D+ K  I+   A+A              P++      +   I    
Sbjct: 144 EQRTLSRLIGTIASDLVKLGISSVFASAAAVTIGTLTTIAAGPLLAAVVVGVAVSIF--- 200

Query: 63  VLNEIDAQCHLSEKLKYAIRDGLKRQ 88
            L  ID +  L++ L   I D     
Sbjct: 201 -LEHIDDEFGLTDALVKLIDDSYDNT 225


>UniRef50_C9PDS9 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PDS9_VIBFU
          Length = 333

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAIL-LTGIV 59
           +  E  L     + + D+AK  I+      +G+    A V      +L  G        +
Sbjct: 252 LRDEATLAELGVNTAGDLAKGFIS-----LVGAALFTAVVVPTTVGVLFSGMTFAAASFI 306

Query: 60  CTVVLNEIDAQCHLSEKLKYAIRDGLK 86
               L+ +D     SE +  A+++  +
Sbjct: 307 LGNALDAVDENNGYSETMTEAVKEYFQ 333


>UniRef50_B7VS78 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VS78_VIBSL
          Length = 395

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           ++ E  L + +G  + D+ K  I+  VA A G+            +      +++ G+  
Sbjct: 258 LNDEVFLTDLVGSLATDLVKIGISSIVAAAAGAGIITITSLVAMHL----AVVVVAGLFT 313

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENM 99
           +++LN++D    ++ K+   +    +   E  K  ++++
Sbjct: 314 SMLLNQLDKHYGITPKVIELLEKAQQEAVEKGKELQQDV 352


>UniRef50_D0IIP2 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC586
           RepID=D0IIP2_9VIBR
          Length = 319

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
              +  LVN+ G+   D+ KA++        G  A +   ++  P+++   A +    + 
Sbjct: 241 FKDDYHLVNWFGNVGSDMFKALVQ----FGAGEAALWIAATYSAPIVIGAIACVAVYALI 296

Query: 61  TVVLNEIDAQCHLSEKLKYAIRD 83
            +  +       +S  L  A+ +
Sbjct: 297 ELAWD----DFKISNHLVEALEN 315


>UniRef50_A6VUI7 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6VUI7_MARMS
          Length = 170

 Score = 44.7 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 2/97 (2%)

Query: 4   ERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVV 63
           E+D  + L    +D++K VI+    TA    A         PV  +  A +   +   V+
Sbjct: 35  EQDFNDLLATLFVDISKIVISVIAGTAA--AAFVVLGFVSAPVWAIVAAGITVSVAVGVI 92

Query: 64  LNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMT 100
           L+ +D    +++K+K          +   +   E + 
Sbjct: 93  LDVVDNAFGITQKVKDLTNKVESSIESFAEAMMEGVA 129


>UniRef50_A1TM04 Putative uncharacterized protein n=4 Tax=Comamonadaceae
           RepID=A1TM04_ACIAC
          Length = 315

 Score = 43.9 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
            ++E+ + + +G   ++  K  +   VA +  +  S        P++++    ++ GI  
Sbjct: 179 FNNEKTMYDLVGGIGVEAVKGGLGALVAYSAAAAFSGVTTIAVAPLVVMAVVAVVAGI-- 236

Query: 61  TVVLNEIDAQCHLSEKLKYAIR 82
              LN +D++  +  K+   ++
Sbjct: 237 --GLNHLDSRFGVKGKVIAGLK 256


>UniRef50_A6ASX7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi HY01
           RepID=A6ASX7_VIBHA
          Length = 285

 Score = 43.5 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATA----IGSLASFACVSFGFPVILVGGAILLT 56
           +  ++ L   LG  + D+ K  ++   A        S+A         P+     A ++ 
Sbjct: 165 LGDKQTLSKLLGTIASDIIKVGLSSAAAAIFVNFAASVAGVTVTLSAGPI----LAAIVI 220

Query: 57  GIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTP 101
                + LN+ D    L++KL  +I + ++      K   E    
Sbjct: 221 SSAVGLYLNKEDQDKGLTQKLIRSIDNHIESINRSIKSDIEEEHN 265


>UniRef50_D0IJ16 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC586
           RepID=D0IJ16_9VIBR
          Length = 347

 Score = 40.1 bits (92), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 1   MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVC 60
           +  +  L     + + D+AK  I+   A  + +         G  V+        T    
Sbjct: 267 LRDDATLAELGVNSAGDLAKGFISLAGAALLTAAMPVTLGVLGTGVL-----FATTSFAI 321

Query: 61  TVVLNEIDAQCHLSEKLKYAIRDGLK 86
             +L+ +DA+   S+ +  A+ +  +
Sbjct: 322 GQILDFVDAENGYSKNITKAVEEYFQ 347


>UniRef50_B9TKL3 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus
           communis RepID=B9TKL3_RICCO
          Length = 374

 Score = 38.1 bits (87), Expect = 0.094,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 2   SSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLT 56
             ++D  + L    MD+AKA ++  +A+A   L      +     + V   ++ T
Sbjct: 322 KRKKDFADLLAKIGMDLAKAGLSAAIASA---LVGTLVAAAAGATLPVAFIVVGT 373


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.319    0.131    0.297 

Lambda     K      H
   0.267   0.0401    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 489,729,691
Number of Sequences: 3077464
Number of extensions: 13033065
Number of successful extensions: 85567
Number of sequences better than 1.0e-01: 34
Number of HSP's better than  0.1 without gapping: 39
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 85490
Number of HSP's gapped (non-prelim): 64
length of query: 112
length of database: 1,040,396,356
effective HSP length: 80
effective length of query: 32
effective length of database: 794,199,236
effective search space: 25414375552
effective search space used: 25414375552
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 87 (38.2 bits)