09/01/2012 00:00:24 : INFO  : Run start: Mon Jan  9 00:00:23 GMT 2012
09/01/2012 00:00:28 : INFO  : Initialised job
09/01/2012 00:00:30 : INFO  : Renaming log file 'phyre2_20120109_000022.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/366d9a69d91f1ad5/phyre_20120109_000022.log'
09/01/2012 00:00:31 : INFO  : Initialised job:
Sequence
>batch____
MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQ
VSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQ
SRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK

09/01/2012 00:00:31 : INFO  : Checked sequence
09/01/2012 00:00:33 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 00:00:34 : INFO  : PSI-BLAST 3 iterations
09/01/2012 00:01:56 : INFO  : PSI-BLAST 5 iterations
09/01/2012 00:03:50 : INFO  : Finished PSI-BLAST
09/01/2012 00:03:52 : INFO  : Running Buildali to generate a3m file
09/01/2012 00:10:31 : INFO  : Converting to HMM
09/01/2012 00:10:33 : INFO  : Calibrating HMM
09/01/2012 00:10:43 : INFO  : Searching HMM database
09/01/2012 00:14:20 : INFO  : Finished buildali
09/01/2012 00:14:22 : INFO  : Predicting secondary structure
09/01/2012 00:14:30 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 00:14:32 : INFO  : Predicting Disordered regions
09/01/2012 00:14:36 : INFO  : Predicted Disorder (Disopred)
09/01/2012 00:14:38 : INFO  : Running memsat_svm check
09/01/2012 00:17:10 : INFO  : Globular protein
09/01/2012 00:17:10 : INFO  : Predicted Transmembrane (memsat_svm) ID '366d9a69d91f1ad5'
09/01/2012 00:17:12 : INFO  : Initialising fold library search
09/01/2012 00:17:15 : INFO  : Initialised search input
09/01/2012 00:17:17 : INFO  : Building Ensemble models
09/01/2012 00:17:21 : INFO  : Building hh.d1mkza_.model.1.pdb
09/01/2012 00:17:34 : INFO  : Building d1mkza_.1.pdb
09/01/2012 00:17:47 : INFO  : Building d1y5ea1.2.pdb
09/01/2012 00:18:00 : INFO  : Building c3rfqC_.3.pdb
09/01/2012 00:18:15 : INFO  : Building c2pjkA_.4.pdb
09/01/2012 00:18:27 : INFO  : Building c2is8A_.5.pdb
09/01/2012 00:18:40 : INFO  : Building d1uuya_.6.pdb
09/01/2012 00:18:53 : INFO  : Building d2f7wa1.7.pdb
09/01/2012 00:19:06 : INFO  : Building d1jlja_.8.pdb
09/01/2012 00:19:19 : INFO  : Building c2g4rB_.9.pdb
09/01/2012 00:19:33 : INFO  : Building d2g2ca1.10.pdb
09/01/2012 00:19:46 : INFO  : Building d1di6a_.11.pdb
09/01/2012 00:20:00 : INFO  : Building c2nqqA_.12.pdb
09/01/2012 00:20:14 : INFO  : Building c3kbqA_.13.pdb
09/01/2012 00:20:28 : INFO  : Building c2fu3A_.14.pdb
09/01/2012 00:20:42 : INFO  : Building d2nqra3.15.pdb
09/01/2012 00:20:56 : INFO  : Building d2ftsa3.16.pdb
09/01/2012 00:21:10 : INFO  : Building c1uz5A_.17.pdb
09/01/2012 00:21:24 : INFO  : Building d1uz5a3.18.pdb
09/01/2012 00:21:37 : INFO  : Building d1wu2a3.19.pdb
09/01/2012 00:21:51 : INFO  : Building c1wu2B_.20.pdb
09/01/2012 00:22:20 : INFO  : Finished HH model building
09/01/2012 00:22:21 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 00:23:12 : INFO  : html domain output complete ID '366d9a69d91f1ad5'
09/01/2012 00:45:45 : INFO  : Run end  : Mon Jan  9 00:45:45 GMT 2012
