162 c1vmaA_ Probab=97.10   E-value=0.0012  Score=40.23  Aligned_columns=132  Identities=21%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             23246879978999869999889999999568997634201210000235644321112222222235543210001112
Q batch____        25 NLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVAR  104 (271)
Q Consensus        25 ~isl~i~~Ge~~~ivG~nGsGKSTllk~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~~~~~~~~~~tv~~~i~~  104 (271)
                      .+.+.-.+..+++++||+|+||||.+-=|+..+.-....+.+-..+....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH----------------
Q ss_conf             3320132222117899999999875203000038610002720122344310123322100000----------------
Q batch____       105 GRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLD----------------  168 (271)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~ri~laral~~~p~ililD----------------  168 (271)
                                    ...+....+.+.+++.-.......++..--++.+..++  ..+-+++|+|                
T Consensus       134 --------------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~  197 (294)
T c1vmaA_         134 --------------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELR  197 (294)
T ss_dssp             --------------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHH
T ss_pred             --------------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf             --------------47999999997619828974883698999999999999--77998999818889878579999999


Q ss_pred             ---------------CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             ---------------0456888778999999999988864987999928
Q batch____       169 ---------------EPTTWLDISHQIDLLELLSELNREKGYTLAAVLH  202 (271)
Q Consensus       169 ---------------Ep~~gLD~~~~~~i~~~l~~l~~~~g~tii~ish  202 (271)
                                     |..--+|.......++.+..+.+.-+.+-++.|.
T Consensus       198 ~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         198 KVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             HHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             9999963035668853999811468789999999996308997699974