BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (130 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...   157   1e-37
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...   144   8e-34
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...   128   7e-29
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...   124   1e-27
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...   120   1e-26
UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...   119   2e-26
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...   114   1e-24
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...   112   3e-24
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...   109   2e-23
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...   109   4e-23
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...   108   6e-23
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...    88   1e-16
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...    83   2e-15
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...    81   9e-15
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...    74   1e-12
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    66   4e-10
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    57   2e-07
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    56   3e-07
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     56   3e-07
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    56   4e-07
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    54   1e-06
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    53   2e-06
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    53   3e-06
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    53   3e-06
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    52   5e-06
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    51   1e-05
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    51   1e-05
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    51   2e-05
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    50   2e-05
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    48   9e-05
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    48   1e-04
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    47   2e-04
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    47   2e-04
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    47   2e-04
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    47   2e-04
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    47   2e-04
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    47   2e-04
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                46   3e-04
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    46   4e-04
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          46   5e-04
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    44   0.001
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    44   0.002
UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magneto...    43   0.002
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    43   0.003
UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum ...    43   0.003
UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    43   0.005
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    42   0.005
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    42   0.005
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    42   0.006
UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rh...    42   0.006
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    41   0.013
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    41   0.016
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    39   0.057
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      38   0.070
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    38   0.087

>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score =  157 bits (396), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ
Sbjct: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF
Sbjct: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120

Query: 121 LARLDIDESA 130
           LARLDIDESA
Sbjct: 121 LARLDIDESA 130


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score =  144 bits (363), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/126 (47%), Positives = 79/126 (62%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +L++KMT  ELA+CLG+A+QT+NRW+REK W+TE  PGVKGGRARL+++D  V EF+ 
Sbjct: 1   MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLT 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N PA  +        E    Y        +RQI   +  MT  EQ ++   L+REGI  F
Sbjct: 61  NIPARRHLLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGF 120

Query: 121 LARLDI 126
           LARL I
Sbjct: 121 LARLGI 126


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score =  128 bits (320), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +    MT  EL E  G   Q ++RW R+ GWK     G KGG A LIL+  QV ++  
Sbjct: 1   MNQFTRWMTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGG-ALLILITQQVYDYFL 59

Query: 61  NTPAFHNTPMLMEA-EERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
            T     +  L    EE  A Y          Q I  ++ ++  EQ ++++ +S EG   
Sbjct: 60  ATDKLRYSAHLYNRIEETPAPYVTWDNE-MMAQFIRTLEMLSPQEQARLSELISEEGAAG 118

Query: 120 FLARLDIDE 128
            + RL + +
Sbjct: 119 LVKRLGLRD 127


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score =  124 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ--VCEF 58
             +   TT EL    G+  ++Q +N+  ++ GW+  +  GV+G      +      V   
Sbjct: 1   MEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLPEEVKAT 60

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           +        T M   A + ++  + GA+   + QI      ++  E+ ++   + REG  
Sbjct: 61  LMRATLMGTTLMRETAPDYVSAASAGAQEYTWIQI---YHQLSAEERTRLIGHILREGAM 117

Query: 119 NFLARLDI 126
           + LARL+ 
Sbjct: 118 SVLARLEN 125


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score =  120 bits (301), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 1   MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M   +   TT EL    G+  ++Q +N+  ++ GW+  +  GV+G      +      E 
Sbjct: 5   MMMEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLP--EE 62

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T     +P          + +           I     ++  E+ ++   + REG  
Sbjct: 63  VKTTLMRETSPDYAVVTPTNVQESTW---------IQIYHQLSVEERTRLIGHILREGAM 113

Query: 119 NFLARLDI 126
             LARL+ 
Sbjct: 114 GMLARLEN 121


>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score =  119 bits (299), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA----- 55

Query: 68  TPMLMEAEERIAEY-APGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDI 126
                E  E   E  A    AP    ++     MT +EQ++    L REGI   L RL I
Sbjct: 56  -----ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110

Query: 127 DES 129
            +S
Sbjct: 111 RDS 113


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score =  114 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 14/130 (10%)

Query: 1   MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M+  +  + T EL    G+   +Q +NR  RE+GW+  +  G +G             + 
Sbjct: 1   MEIKKEWIATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARGKAVEYSWHSLP--DM 58

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T +    P   +        +P   +  + +I      ++D E++ +  F+ REG+ 
Sbjct: 59  VKKTLSLRTNPAEYQL-------SPQETSATWNEI---YRQLSDAERDFIVSFIVREGVL 108

Query: 119 NFLARLDIDE 128
           N L RLD  +
Sbjct: 109 NLLKRLDYPD 118


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score =  112 bits (280), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL    G+  + Q +N+  R +GWK  +  GV+G      +      + I 
Sbjct: 1   MDKEWFSAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQGKALEYHIDSLP--KPIL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                           +   +            I A   +TD E+EK+  FL REGI+  
Sbjct: 59  KQLRLKEDAEKYSL-NQQDPFTIW---------IEAYRQLTDSEREKLIAFLFREGIQGL 108

Query: 121 LARLDID 127
           + RL  D
Sbjct: 109 IKRLSND 115


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score =  109 bits (273), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +     +ELA   G+  + Q +N   + +GW+  +  GV+G          +  E+  
Sbjct: 1   MKKEWFAAKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQG----------KAVEYHI 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
            +        L   EE  A+YA   + P     + A    T+ E+E+V  F+ REG ++ 
Sbjct: 51  GSLPITILNSLQLREE-PAQYATTRQDPL-TLWVEAYYRFTEAEREQVISFIFREGAKSL 108

Query: 121 LARLDID 127
           + RL++D
Sbjct: 109 IERLEMD 115


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score =  109 bits (271), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 14/128 (10%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
                    EL    G+  + Q +N   R +GW + +  GV+G          +  E+  
Sbjct: 1   MKNEWFAARELTGIAGLPSSPQGINLMARREGWISRRRKGVQG----------KAVEYHI 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N+       +L+  E+  AEY    + P     +    ++++ E+EKV  FL REGI + 
Sbjct: 51  NSLPIGARSLLVLQED-PAEYQLERQDPL-AVWVEYYYHLSESEREKVLTFLMREGIDSL 108

Query: 121 LARLDIDE 128
           LA +  +E
Sbjct: 109 LALIAAEE 116


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score =  108 bits (269), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 14/125 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +ELA   G     Q +N+  + +GW+ ++  GV+G          +  E+  
Sbjct: 1   MNKEWYSAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQG----------KAVEYHI 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           +         L+  +E  A+Y   +  P        +  M++ E++KV   + R GI  F
Sbjct: 51  SCFPPEVVDELLARDE-QAQYLISSNQPEKVWYSILL-QMSEEERKKVTSLILRIGINEF 108

Query: 121 LARLD 125
           L RL 
Sbjct: 109 LRRLG 113


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score = 87.6 bits (215), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 1  MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
          MK  ++  T  ELA  LGV  + V    R +GW+  + PG  GG   L+ V       + 
Sbjct: 1  MKTFKDAYTAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGNEWLV-VSMPEGTALA 59

Query: 61 NTPAFHNTPMLMEAEERI----AEYAPGARAPA 89
             A   T +   A +      A  APGA  P 
Sbjct: 60 VRMAEERTAVAAAASDHPPTTSAPSAPGAPTPL 92


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score = 83.4 bits (204), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  EL    G+  + Q VN   + + W  +K    +G             E+  
Sbjct: 1   MKKEWYTAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQGNGV----------EYHY 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           +         L E  E +A Y      P     + A   + D EQ+ V + + R+GIR+F
Sbjct: 51  SCLPEETLIAL-ELYEPLAHYKLNKEEPL-VIWVKAFQQLNDGEQKTVTELILRDGIRSF 108

Query: 121 LARL 124
           L ++
Sbjct: 109 LEKI 112


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score = 81.4 bits (199), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 27  WIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGAR 86
             R +GW + +  GV+G          +  E+  ++       +L+  EE  A Y    +
Sbjct: 1   MARREGWNSRRRKGVQG----------KALEYHIDSLPAGTRNLLVLKEE-PASYQVERK 49

Query: 87  APAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127
            P     I    ++T+ E+EKV  FL REGI + LAR+  D
Sbjct: 50  DPL-VVWIEYYYHLTECEREKVLAFLIREGIGSLLARISAD 89


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score = 74.1 bits (180), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 14/121 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            ++  +T +EL    G+  + Q +N   R + W + K  G++G      +    +     
Sbjct: 1   MIKEWLTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQGKALEYHISSIPI----- 55

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                 +        E    Y       A+     A + ++  E+  V  F+ R+G    
Sbjct: 56  ------DLEEPTVMYEAPRIYHVKRDEHAHI-WQEAYNQLSHDERVAVLSFIMRKGALAL 108

Query: 121 L 121
           +
Sbjct: 109 I 109


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor
          NM305 RepID=C5S4R0_9PAST
          Length = 179

 Score = 66.0 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 1  MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQV 55
          M   +   +  ELA   G+    Q +N+  R + W+     GV+GG           
Sbjct: 1  MGNFKEWFSASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGGAVEYHYTSFPE 57


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 56.8 bits (135), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++N +T +E+A   G++     VNR  R++ W   +  GV+GG          +   +Q 
Sbjct: 1   MKNWVTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGGGYEYSFSSLPL--EVQT 58

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIIN-AIDNMTDIEQEK 107
                ++  L   +E            A+  + +   +     E+  
Sbjct: 59  EYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRF 105


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 56.4 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 8/117 (6%)

Query: 7   KMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE-FIQNTP 63
            M   ELA   G+    + + +    +GW++ K    KG                     
Sbjct: 4   WMPASELAGLPGLPGTDRGIRKLADREGWQSRKRQ--KGKGLEYSPSSLPEVTRTHLAHL 61

Query: 64  AFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           +       +  +   A+YA     P           M D E  +  + ++R GI  F
Sbjct: 62  SVKAAMDEVSKQPEYAQYA--EAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF 115


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 56.4 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 14/134 (10%)

Query: 1   MKRL--RNKMTTEELAECLGVAKQTVN--RWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           M     +     +EL    GV K   N  R    + W   +  G KG             
Sbjct: 1   MMSFEIKEWFNAKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGV----------AY 50

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
           E+  N+        +  A                 ++I A+  +T  EQ    + +   G
Sbjct: 51  EYHINSLPEETRRAIKGASLSDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAG 110

Query: 117 IRNFLARLDIDESA 130
           I+  +  +   + A
Sbjct: 111 IKGLMPTIVSKDKA 124


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
          RepID=B0UVF4_HAES2
          Length = 145

 Score = 56.0 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++   T +EL +  G+    Q +  + ++  W+  +  GVKG      + D         
Sbjct: 1  MKEWYTLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKGNVFEYYVYDMPESVQTSL 60

Query: 62 TPAFHNTPMLMEAEE 76
                  +  E  +
Sbjct: 61 GVTKETLALKQELID 75


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 54.5 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLI-LVDTQVCEFI 59
           M  +    +T+ELA  LG+  ++V+   + +GW+     G  GG+  ++  +  ++ + +
Sbjct: 1   MNTIATTYSTQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGKLWVVSSMPAEIRDRL 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLS 113
            +        ++   EE  A  + G+   A          ++D E+  V   L+
Sbjct: 61  ASALLRQPAAII---EESAACASIGSNICAPIGTAGNGPALSDRERAIVTARLA 111


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JV30_PASHA
          Length = 656

 Score = 53.3 bits (126), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++     +E+A   GV     +V+R   ++GW+  +  GV+G      L        I+ 
Sbjct: 1   MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVTYEYHLTSLP----IET 56

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEK 107
                    L    +  AE  P    PA   +I  ++N TD  ++K
Sbjct: 57  QQQLRLNAALAVIPQA-AELQPKRDDPA---LIARLNNATDKGRDK 98


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4
          Tax=Desulfovibrio RepID=Q30W02_DESDG
          Length = 708

 Score = 53.3 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 1  MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLI 49
          M + ++  T +ELA  L V   T+ R    +GW++    G  GG   +I
Sbjct: 1  MAKAKDAYTAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGNEWII 49


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 52.9 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 5/110 (4%)

Query: 5   RNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
           R   T  ELA   G+ K  + VN+   ++GW T +     G      L    V    Q  
Sbjct: 6   REWFTATELANKPGLPKYKRGVNQQASKQGWNTRQVKVRGGSANEYHLSSLPVET--QAA 63

Query: 63  PAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
               + P  +++     E++       ++   N      D  Q K+   L
Sbjct: 64  LIKQHLPTPVKSSSESTEFS-YDPQALWQHYDNKPQKQKDAAQNKLNLLL 112


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 52.2 bits (123), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 6/103 (5%)

Query: 1   MKRLRNKMTTEELAECLGVAKQ-TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           M   +   TT +L   LG++ + TV R    +GW +    G  GG   L+     + +  
Sbjct: 1   MASPKEAYTTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGNEWLL---ASMPKST 57

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTD 102
           +            +  E+     P   A   R+ I A   M+ 
Sbjct: 58  RKALLDGMLRTAAQEAEKNLPALPPLDAADPRRAIAA--RMSP 98


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
          RepID=A9L0K4_SHEB9
          Length = 738

 Score = 51.4 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 11/83 (13%)

Query: 3  RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
            +   +T E+AE L V  + V    +++ W+ ++  G+ GG            E+  N+
Sbjct: 1  MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG-----------FEYHLNS 49

Query: 63 PAFHNTPMLMEAEERIAEYAPGA 85
                  L + E      +P +
Sbjct: 50 LPLEARQKLAKQEAEQIATSPTS 72


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LBA7_TOLAT
          Length = 741

 Score = 51.0 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 9/118 (7%)

Query: 4   LRNKMTTEELAECLGVAKQ---TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           ++    + ELA  +G+  Q    V +    + WK  K    KG    +  + ++   ++ 
Sbjct: 1   MKEWFISSELAGLVGL-PQYQDGVRKKADREDWKNRKRESGKGLEYHISSLPSETRAYLA 59

Query: 61  NTPAFHN-TPMLMEAEERIAEYAPGARAPAYRQII----NAIDNMTDIEQEKVAQFLS 113
            T A    + +   A+  +A  A   ++    Q        +  +   ++++    L 
Sbjct: 60  KTMASETASAIQDHAKAGVAMAALADKSAVSVQAKIENGRKLIALKPEQRKRADSRLL 117


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
           RepID=Q8EJ30_SHEON
          Length = 715

 Score = 50.6 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL +  G+    Q +    + + W++ K  G KG    L  +   + +   
Sbjct: 1   MNKAWFSPQELLQLPGMPTTVQGIRFKAKTESWESRKKEGSKGFEYHLGSLP-PITQAHL 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQE 106
              A  NT     A  R     P ++     ++      +   +Q+
Sbjct: 60  RQQAVKNTTSREVAAARQLIATPASQLVKKTELQQQFLTLPKAKQQ 105


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
          RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 50.2 bits (118), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 1  MKRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
          MK  +      +LA    ++     V R  +++GW   +  G+KGG              
Sbjct: 1  MKSKKEWYLPRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGGGFEYHYSSLPP--- 57

Query: 59 IQNTPAFHNTPMLMEAEERIAE 80
               A    P   + E   A 
Sbjct: 58 -AVQQALGFKPNEAKKEPLPAA 78


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 47.9 bits (112), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 22/131 (16%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T+ ELA   G+    + V     ++ W+       KG             E+  
Sbjct: 1   MNKEWYTSTELAGLPGLPSTDRNVRIKAEKENWEKRPREIGKG------------FEYHI 48

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL-SREGIRN 119
            +        L       +      ++         +  +   EQ K    L + +G   
Sbjct: 49  RSFPMETIAHL-------SRDFLQQKSEGELAAEKLVAELAAKEQAKKRHVLNASQGAMR 101

Query: 120 FLARLDIDESA 130
            L  L  ++ A
Sbjct: 102 LLNTLKAEDRA 112


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
          RepID=B8GS44_THISH
          Length = 671

 Score = 47.9 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 22/94 (23%), Gaps = 5/94 (5%)

Query: 3  RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE--F 58
          R     + + LA   G+   +Q V    +  GW   K  G KGG          +     
Sbjct: 4  REEQWFSAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSG-KGGGREYAFSSLPIATQAA 62

Query: 59 IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQ 92
          +                E             +  
Sbjct: 63 LLKAAEPAARAARAAQGEPAGAPGEYDAEALWAW 96


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W3I3_MARMS
          Length = 216

 Score = 47.1 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 11/133 (8%)

Query: 3   RLRNKMTTEELAECLGVAKQTVN--RWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  ELA   G+     N  R  + + W+  +  G++G             +  Q
Sbjct: 1   MTKEWFTAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVNFEYHASSLP--QETQ 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAP----GARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
                      ++AE   +         A+A  + +       +    +  + + LS + 
Sbjct: 59  EALGLEGVSKPVQAENNDSNMVTIQIYSAKAKTWNKAKPETHMVLP--KGYLPKSLSEQE 116

Query: 117 IRNFLARLDIDES 129
           + N  A L+  +S
Sbjct: 117 LNNLFA-LEAPDS 128


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 47.1 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 13/72 (18%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++      EL +  G+  +   + +  +  GWK+ K  G            ++  E+  +
Sbjct: 1  MKEWFLASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRG-----------QSRALEYHIS 49

Query: 62 TPAFHNTPMLME 73
          +    +   L E
Sbjct: 50 SFDERDLAELRE 61


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
           RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 46.8 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 12/128 (9%)

Query: 2   KRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
             +   MT +++ E  G+    Q V++  +++GW      G +G             E+I
Sbjct: 5   NEINQWMTPKQITELDGMPGTIQGVHKRAKKEGWPKRSQEGRRG----------PGVEYI 54

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
              PA     +     + +  ++         ++     NM       + Q      +  
Sbjct: 55  PAIPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSGLMQERPSISVDT 114

Query: 120 FLARLDID 127
            LA L ID
Sbjct: 115 LLATLGID 122


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 46.8 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 13/85 (15%)

Query: 40  GVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDN 99
           G++G             E+  ++   + +  +    E     +       +   INA   
Sbjct: 2   GIQGKGI----------EYFIDSLPDNVSTYIYHHSELFERISIQEHFDIW---INAFKQ 48

Query: 100 MTDIEQEKVAQFLSREGIRNFLARL 124
           +T  E+ K ++++ REGI +    L
Sbjct: 49  LTPSERYKFSEYILREGIISIYKNL 73


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 46.8 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 5   RNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPA 64
           +++ + +ELA  +G++ Q + +   ++GW  E   G  G R         V    +    
Sbjct: 10  KDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIARQ 69

Query: 65  FHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARL 124
                    A E          +P       A + + D+E+EK  + L +E      ARL
Sbjct: 70  RAAQAAAAIAPE----------SPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARL 119


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
          RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 46.8 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 4  LRNKMTTEELAECLGVAKQTVNRWIREKGWKT-----EKFPGVKGGRARLILVDTQVCEF 58
          +R   T +E+A+  GV+++ +N+  R+  W+       K  G  GG      V       
Sbjct: 1  MRQFFTPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG--WEYHVSLFPQAA 58

Query: 59 IQNTPAFHNTPMLMEA 74
                 H  P     
Sbjct: 59 QARLMVIHGAPANANR 74


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 46.4 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 10/105 (9%)

Query: 7   KMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF----IQ 60
            ++ +E A   G+      V    +++GW+     GVKGG+A     ++   E     + 
Sbjct: 4   WVSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAALLL 63

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQ 105
                  +    E      E     R   + +     DN +D ++
Sbjct: 64  RQGEIETSLGYFEIARPTLEAHDYDREALWSKW----DNASDSQR 104


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
           RepID=A1RM55_SHESW
          Length = 727

 Score = 46.0 bits (107), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 14/113 (12%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            L   +T +EL +   +   +  V R  + +GW   K  G  GG            E+  
Sbjct: 1   MLDIWLTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG-----------FEYHL 49

Query: 61  NTPAFHNTPM-LMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
           N+         L E  +             + +      N +  E+    +F+
Sbjct: 50  NSLPLAAQQHILSEKTKAQIAKKTEQAKTLHEKFSGEKKNASKDEKTAALRFM 102


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 45.6 bits (106), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 27/106 (25%), Gaps = 14/106 (13%)

Query: 6   NKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTP 63
              + +ELA   GV    + V      K W   +  G            T+  E+  +  
Sbjct: 3   EWFSAQELAGLPGVPGTARNVKAMAERKSWSGRRRVG------------TKAIEYHVSAL 50

Query: 64  AFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVA 109
                  L+ A           +      +      +    ++ V 
Sbjct: 51  PKETRAALLNAALGEVATKAVRQETQLALVETNRQQLVADARQGVL 96


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 44.4 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 2   KRLRNKMTTEELAE----CLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
             L+   + +ELAE    CL   KQ V    +++GW T K  GV G      L +    +
Sbjct: 4   NSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGVGGEILEFALSNLP--Q 61

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGI 117
            IQ          ++EA+ +               +      + D     VA  L  EG 
Sbjct: 62  EIQTEIRSRFMSAVVEAKPKKLPAV--RAEVDVGNLTTKQREIADARMALVAYVLELEGS 119

Query: 118 RNFLARLDI 126
            + +  +  
Sbjct: 120 MSRIKAITY 128


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 43.7 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 5  RNKMTTEELAECLGVAKQTVN--RWIREKGWKTEKFPGVKGGRARLILVDTQV 55
          +   T  E+A    + +Q  N  R   +  W   +  G +G           +
Sbjct: 7  KEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGVAFEYHYSSLPI 59


>UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W6I7_MAGSA
          Length = 193

 Score = 43.3 bits (100), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 2   KRLRNKMTTEEL--AECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
           +R++   T  EL      G+  +K  V R  RE+GW TEK P   G R            
Sbjct: 41  RRIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEKVPCQGGERHAYHFTSLPRRA 100

Query: 58  F 58
           F
Sbjct: 101 F 101


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 42.9 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 13/135 (9%)

Query: 1   MKRLRNKMTTEELAE----CLGVAKQTVNRWIREKGWKTEKFPGVKGGRAR-LILVDTQV 55
           M  L+   + +EL       L   K+ V    + + W++ K  G  GG    L  +  +V
Sbjct: 1   MCELKPYYSAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGGVEYALSSLPQEV 60

Query: 56  CEFIQNTPAFHNTP--------MLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEK 107
            E I++  A             +     E + E    A       +   +       + K
Sbjct: 61  QEEIRDKFATSVVAGKPKKLPVLKSVVLEDLTEKQRQAADARMTLVAYILQLEQAQPRYK 120

Query: 108 VAQFLSREGIRNFLA 122
             +F  ++  +N L+
Sbjct: 121 AVKFFCQQAKQNLLS 135


>UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW
          RepID=B6IMZ2_RHOCS
          Length = 191

 Score = 42.9 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 3  RLRNKMTTEELAEC--LGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
          R+R   +  ELA     G+   K  + R  R + W+  +  G  G R    +       F
Sbjct: 39 RVREWFSAAELAGVRLPGLPATKAGITRLARAEAWRVREVHGRGGIRFEYHVTSLPPRAF 98


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 42.5 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 5   RNKMTTEELA--ECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           ++  T  ELA     GV   +Q V      + W   +    KG      L      E   
Sbjct: 6   KSHYTAPELAMLGLPGVPTTEQGVRYSATREKWAARRR--AKGKGLEYALDSLPA-EAQA 62

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                 +  ++     + A+           Q++      TD ++ +      R+GI + 
Sbjct: 63  AIRHRASAALVTSVPAQPAKAVIRREQQL--QLVE-----TDAQRLRADA---RKGILSI 112

Query: 121 LARL 124
           L R+
Sbjct: 113 LDRI 116


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 42.1 bits (97), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 13/74 (17%)

Query: 20 AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQV-------------CEFIQNTPAFH 66
          + + + +    +GW+  +  GVKG           +                  N P  H
Sbjct: 10 SDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNEPRRH 69

Query: 67 NTPMLMEAEERIAE 80
           T  +   E    E
Sbjct: 70 YTTEVSSIENTQTE 83


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
          RepID=Q125Z1_POLSJ
          Length = 772

 Score = 42.1 bits (97), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 5  RNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
          ++ +T  EL     +   K+ V+R     GW+  +  G  G R    +         +  
Sbjct: 6  KDWLTANELLGLPNMPADKRGVHRKALASGWQYREVAGNGGTRREYHVASLPATT--RAA 63

Query: 63 PAFHNTPMLM 72
           ++H T +L 
Sbjct: 64 LSWHTTAVLA 73


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 42.1 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 6  NKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLI 49
                +LA   G+    + V +    +GWK +K  G  GG    +
Sbjct: 3  EWFMPTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGGYEYHV 48


>UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISS2_RHOCS
          Length = 710

 Score = 42.1 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 4   LRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           +++  T  ELA+     +   ++ +       GW++ +     GGR    L        +
Sbjct: 1   MKDWFTAAELADLQLPAIASTERGIRGQATRGGWESRQRAARGGGR-EYPLSALPEEARL 59

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIE 104
           +            E        + G              ++ ++E
Sbjct: 60  ELARRAAAEAGDYEKPTPPKRKSVGPAPQNVNVATMPEKHLAEME 104


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 41.0 bits (94), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 12/68 (17%)

Query: 6  NKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTP 63
             +  +LA   G+  + Q VN+  R++ W+          + + I    +  E+  ++ 
Sbjct: 3  EWFSASDLAGVKGMPSSPQGVNKKARQELWQ----------KQQQIGKQGKAFEYHISSL 52

Query: 64 AFHNTPML 71
                 L
Sbjct: 53 PPETQQAL 60


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
          RepID=B8FGN6_DESAA
          Length = 653

 Score = 40.6 bits (93), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%)

Query: 3  RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
            +   T +E+A+ +G+ +++V R   ++GW         G +         + 
Sbjct: 1  MEKRTWTAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAHSGLPIP 54


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 38.7 bits (88), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 5   RNKMTTEELAECLGV-----AKQTVNRWIREKGWKT-----EKFPGVKGGRARLILVDTQ 54
           +   +  +LAE  G+      K+ +N     +GW        +  G  GG          
Sbjct: 8   QEWWSAADLAE-AGLPDLPGTKRKINLLAEREGWARHAGKVRRRKGA-GGGVEYHWSLLP 65

Query: 55  VCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSR 114
           +   ++ +    N+P     ++   E    A   A  +    ++ + ++E    A     
Sbjct: 66  IRARMRLSADLVNSPAARPGKDEAWERYAAAGDKARTEAEARLEAIAEVELLVGAGLTRS 125

Query: 115 EGIRNFLARLDIDESA 130
             +R    +L   E +
Sbjct: 126 AAVREVARKLGRSEKS 141


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 38.3 bits (87), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 5/88 (5%)

Query: 23  TVNRWIREKGWKTEKFPGVKGGRARLILV---DTQVCEFIQNTPAFHNTPMLMEAEERIA 79
            V+     +GW  +K  GVKGG+A    V    T+  E +             +A E+  
Sbjct: 12  GVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTGAQANEKQD 71

Query: 80  EYAPGARAPAYRQIINAIDNMTDIEQEK 107
                        +IN I+ +   E  K
Sbjct: 72  SSEL--INKLTTTLINMIEELEPDEARK 97


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 38.3 bits (87), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 8/112 (7%)

Query: 2   KRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
           + L+   +  ELA      L  A + +    + + WK++K  G  GG     L    +  
Sbjct: 4   QSLKTHYSVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGR-GGGLEYELASLPI-- 60

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYA-PGARAPAYRQIINAIDNMTDIEQEKV 108
            +QN      TP       +  E   P A    ++    A     +  + K+
Sbjct: 61  EVQNELLLKTTPEQTAVALQKIEETRPLASNEVWQLWDEASAKAQEQAKIKL 112


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...   129   2e-29
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...   119   4e-26
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...   108   4e-23
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...   107   1e-22
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...   106   1e-22
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...   106   2e-22
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...   106   2e-22
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...   105   7e-22
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...   104   1e-21
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...   102   3e-21
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...   101   5e-21
UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...   100   1e-20
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...    99   3e-20
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     93   3e-18
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    89   4e-17
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    89   5e-17
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    88   1e-16
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    86   4e-16
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    84   1e-15
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    84   2e-15
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    83   2e-15
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    83   3e-15
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    82   5e-15
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...    82   6e-15
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    82   7e-15
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...    80   2e-14
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    80   2e-14
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    80   3e-14
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                78   9e-14
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    75   7e-13
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    75   7e-13
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          75   8e-13
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    75   8e-13
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    74   1e-12
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    73   3e-12
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    72   6e-12
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    69   4e-11
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    68   7e-11
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    65   5e-10
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    65   9e-10
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    58   8e-08
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    54   1e-06

Sequences not found previously or not previously below threshold:

UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    63   4e-09
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    61   1e-08
UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum ...    59   4e-08
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    58   6e-08
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    57   1e-07
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    57   2e-07
UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=...    55   9e-07
UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rh...    54   1e-06
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    54   2e-06
UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmone...    53   3e-06
UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 1280...    53   4e-06
UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magneto...    52   7e-06
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    52   7e-06
UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella...    51   8e-06
UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisser...    49   6e-05
UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp...    48   6e-05
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    48   9e-05
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    47   2e-04
UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongens...    47   2e-04
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      45   6e-04
UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingell...    45   9e-04
UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitroso...    45   0.001
UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 Re...    44   0.001
UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9...    44   0.001
UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum al...    44   0.002
UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Ente...    43   0.003
UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=...    43   0.003
UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=M...    43   0.003
UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomo...    43   0.004
UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobactera...    42   0.005
UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotr...    42   0.005
UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A...    41   0.008
UniRef50_Q38437 Fragment from genes A and ner (C-terminus of ner...    40   0.019
UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseoba...    40   0.024

>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score =  129 bits (324), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ
Sbjct: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF
Sbjct: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120

Query: 121 LARLDIDESA 130
           LARLDIDESA
Sbjct: 121 LARLDIDESA 130


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score =  119 bits (297), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 60/126 (47%), Positives = 79/126 (62%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +L++KMT  ELA+CLG+A+QT+NRW+REK W+TE  PGVKGGRARL+++D  V EF+ 
Sbjct: 1   MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLT 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N PA  +        E    Y        +RQI   +  MT  EQ ++   L+REGI  F
Sbjct: 61  NIPARRHLLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGF 120

Query: 121 LARLDI 126
           LARL I
Sbjct: 121 LARLGI 126


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score =  108 bits (270), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL    G+    Q +N+  R +GWK  +  GV+G      +      + I 
Sbjct: 1   MDKEWFSAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQGKALEYHIDSLP--KPIL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                               Y+   + P +   I A   +TD E+EK+  FL REGI+  
Sbjct: 59  KQLRLKEDAEK---------YSLNQQDP-FTIWIEAYRQLTDSEREKLIAFLFREGIQGL 108

Query: 121 LARLDID 127
           + RL  D
Sbjct: 109 IKRLSND 115


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ--VCEF 58
             +   TT EL    G+  ++Q +N+  ++ GW+  +  GV+G      +      V   
Sbjct: 1   MEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLPEEVKAT 60

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           +        T M   A + ++  + GA+   + QI      ++  E+ ++   + REG  
Sbjct: 61  LMRATLMGTTLMRETAPDYVSAASAGAQEYTWIQI---YHQLSAEERTRLIGHILREGAM 117

Query: 119 NFLARLDI 126
           + LARL+ 
Sbjct: 118 SVLARLEN 125


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score =  106 bits (265), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 1   MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M   +   TT EL    G+  ++Q +N+  ++ GW+  +  GV+G      +      E 
Sbjct: 5   MMMEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLP--EE 62

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T     +P          + +           I     ++  E+ ++   + REG  
Sbjct: 63  VKTTLMRETSPDYAVVTPTNVQEST---------WIQIYHQLSVEERTRLIGHILREGAM 113

Query: 119 NFLARLDI 126
             LARL+ 
Sbjct: 114 GMLARLEN 121


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +    MT  EL E  G   Q ++RW R+ GWK     G KGG   LIL+  QV ++  
Sbjct: 1   MNQFTRWMTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGGAL-LILITQQVYDYFL 59

Query: 61  NTPAFHNTPMLMEA-EERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
            T     +  L    EE  A Y          Q I  ++ ++  EQ ++++ +S EG   
Sbjct: 60  ATDKLRYSAHLYNRIEETPAPYVTWDNE-MMAQFIRTLEMLSPQEQARLSELISEEGAAG 118

Query: 120 FLARLDIDE 128
            + RL + +
Sbjct: 119 LVKRLGLRD 127


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 1   MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M+  +  + T EL    G+   +Q +NR  RE+GW+  +  G +G             + 
Sbjct: 1   MEIKKEWIATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARGKAVEYSWHSLP--DM 58

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T +    P   +   +                      ++D E++ +  F+ REG+ 
Sbjct: 59  VKKTLSLRTNPAEYQLSPQETSAT----------WNEIYRQLSDAERDFIVSFIVREGVL 108

Query: 119 NFLARLDIDE 128
           N L RLD  +
Sbjct: 109 NLLKRLDYPD 118


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score =  105 bits (260), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 14/128 (10%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
                    EL    G+  + Q +N   R +GW + +  GV+G      +    +     
Sbjct: 1   MKNEWFAARELTGIAGLPSSPQGINLMARREGWISRRRKGVQGKAVEYHINSLPI----- 55

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                     L+  +E  AEY    + P     +    ++++ E+EKV  FL REGI + 
Sbjct: 56  ------GARSLLVLQEDPAEYQLERQDPL-AVWVEYYYHLSESEREKVLTFLMREGIDSL 108

Query: 121 LARLDIDE 128
           LA +  +E
Sbjct: 109 LALIAAEE 116


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score =  104 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +     +ELA   G+  + Q +N   + +GW+  +  GV+G      +    +   I 
Sbjct: 1   MKKEWFAAKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQGKAVEYHIGSLPI--TIL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N+             E  A+YA   + P     + A    T+ E+E+V  F+ REG ++ 
Sbjct: 59  NSLQLR---------EEPAQYATTRQDPL-TLWVEAYYRFTEAEREQVISFIFREGAKSL 108

Query: 121 LARLDID 127
           + RL++D
Sbjct: 109 IERLEMD 115


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score =  102 bits (254), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  EL    G+  + Q VN   + + W  +K    +G             E+  
Sbjct: 1   MKKEWYTAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQGNG----------VEYHY 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           +         L E  E +A Y      P     + A   + D EQ+ V + + R+GIR+F
Sbjct: 51  SCLPEETLIAL-ELYEPLAHYKLNKEEPL-VIWVKAFQQLNDGEQKTVTELILRDGIRSF 108

Query: 121 LARLDID 127
           L ++  D
Sbjct: 109 LEKIVKD 115


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score =  101 bits (252), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 14/125 (11%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +ELA   G     Q +N+  + +GW+ ++  GV+G             E+  
Sbjct: 1   MNKEWYSAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQGK----------AVEYHI 50

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           +         L+  +E  A+Y   +  P      + +  M++ E++KV   + R GI  F
Sbjct: 51  SCFPPEVVDELLARDE-QAQYLISSNQPEKVWY-SILLQMSEEERKKVTSLILRIGINEF 108

Query: 121 LARLD 125
           L RL 
Sbjct: 109 LRRLG 113


>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score =  100 bits (249), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA----- 55

Query: 68  TPMLMEAEERIAEY-APGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDI 126
                E  E   E  A    AP    ++     MT +EQ++    L REGI   L RL I
Sbjct: 56  -----ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110

Query: 127 DES 129
            +S
Sbjct: 111 RDS 113


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score = 99.3 bits (245), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 3   RLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            ++  +T +EL    G+    Q +N   R + W + K  G++G      +    +     
Sbjct: 1   MIKEWLTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQGKALEYHISSIPI----- 55

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                 +        E    Y       A+     A + ++  E+  V  F+ R+G    
Sbjct: 56  ------DLEEPTVMYEAPRIYHVKRDEHAHI-WQEAYNQLSHDERVAVLSFIMRKGALAL 108

Query: 121 LARL 124
           +  +
Sbjct: 109 IDLI 112


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 93.1 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 14/134 (10%)

Query: 1   MKRL--RNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           M     +     +EL    GV K    + R    + W   +  G KG             
Sbjct: 1   MMSFEIKEWFNAKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGVAY---------- 50

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
           E+  N+        +  A                 ++I A+  +T  EQ    + +   G
Sbjct: 51  EYHINSLPEETRRAIKGASLSDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAG 110

Query: 117 IRNFLARLDIDESA 130
           I+  +  +   + A
Sbjct: 111 IKGLMPTIVSKDKA 124


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W3I3_MARMS
          Length = 216

 Score = 89.2 bits (219), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 11/133 (8%)

Query: 3   RLRNKMTTEELAECLGVAKQTVN--RWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  ELA   G+     N  R  + + W+  +  G++G             +  Q
Sbjct: 1   MTKEWFTAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVNFEYHASSLP--QETQ 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAP----GARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
                      ++AE   +         A+A  + +       +    +  + + LS + 
Sbjct: 59  EALGLEGVSKPVQAENNDSNMVTIQIYSAKAKTWNKAKPETHMVLP--KGYLPKSLSEQE 116

Query: 117 IRNFLARLDIDES 129
           + N  A L+  +S
Sbjct: 117 LNNLFA-LEAPDS 128


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 88.9 bits (218), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 5/113 (4%)

Query: 2   KRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           ++ R   T  ELA   G+ K  + VN+   ++GW T +     G      L    V    
Sbjct: 3   EQNREWFTATELANKPGLPKYKRGVNQQASKQGWNTRQVKVRGGSANEYHLSSLPV--ET 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
           Q      + P  +++     E++       ++   N      D  Q K+   L
Sbjct: 61  QAALIKQHLPTPVKSSSESTEFS-YDPQALWQHYDNKPQKQKDAAQNKLNLLL 112


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LBA7_TOLAT
          Length = 741

 Score = 87.7 bits (215), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 4   LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++    + ELA  +G+ +    V +    + WK  K    KG    +  + ++   ++  
Sbjct: 1   MKEWFISSELAGLVGLPQYQDGVRKKADREDWKNRKRESGKGLEYHISSLPSETRAYLAK 60

Query: 62  TPAFHN-TPMLMEAEERIAEYAPGARAPAYRQII----NAIDNMTDIEQEKVAQFLS 113
           T A    + +   A+  +A  A   ++    Q        +  +   ++++    L 
Sbjct: 61  TMASETASAIQDHAKAGVAMAALADKSAVSVQAKIENGRKLIALKPEQRKRADSRLL 117


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
           RepID=Q8EJ30_SHEON
          Length = 715

 Score = 85.8 bits (210), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL +  G+    Q +    + + W++ K  G KG    L  +   + +   
Sbjct: 1   MNKAWFSPQELLQLPGMPTTVQGIRFKAKTESWESRKKEGSKGFEYHLGSLP-PITQAHL 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQF-LSREGIRN 119
              A  NT     A  R     P ++     ++      +   +Q+   +  L    + N
Sbjct: 60  RQQAVKNTTSREVAAARQLIATPASQLVKKTELQQQFLTLPKAKQQVAMERQLLLNDMAN 119

Query: 120 FLA 122
           F+A
Sbjct: 120 FIA 122


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 83.8 bits (205), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 22/131 (16%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T+ ELA   G+    + V     ++ W+       KG             E+  
Sbjct: 1   MNKEWYTSTELAGLPGLPSTDRNVRIKAEKENWEKRPREIGKG------------FEYHI 48

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL-SREGIRN 119
            +        L       +      ++         +  +   EQ K    L + +G   
Sbjct: 49  RSFPMETIAHL-------SRDFLQQKSEGELAAEKLVAELAAKEQAKKRHVLNASQGAMR 101

Query: 120 FLARLDIDESA 130
            L  L  ++ A
Sbjct: 102 LLNTLKAEDRA 112


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 83.8 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 8/120 (6%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE-FIQ 60
           +   M   ELA   G+    + + +    +GW++ K    KG                  
Sbjct: 1   MNAWMPASELAGLPGLPGTDRGIRKLADREGWQSRKRQ--KGKGLEYSPSSLPEVTRTHL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
              +       +  +   A+YA     P           M D E  +  + ++R GI  F
Sbjct: 59  AHLSVKAAMDEVSKQPEYAQYA--EAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF 115


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 83.5 bits (204), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 4/131 (3%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV-DTQVCEFI 59
           M  +    +T+ELA  LG+  ++V+   + +GW+     G  GG+  ++     ++ + +
Sbjct: 1   MNTIATTYSTQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGKLWVVSSMPAEIRDRL 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
            +        ++   EE  A  + G+   A          ++D E+  V   L+     +
Sbjct: 61  ASALLRQPAAII---EESAACASIGSNICAPIGTAGNGPALSDRERAIVTARLAFCRELD 117

Query: 120 FLARLDIDESA 130
            +A L   ++A
Sbjct: 118 RIAPLVGKKAA 128


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 82.7 bits (202), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 2   KRLRNKMTTEELAE----CLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
             L+   + +ELAE    CL   KQ V    +++GW T K  GV G      L +    +
Sbjct: 4   NSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGVGGEILEFALSNLP--Q 61

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGI 117
            IQ          ++EA+ +               +      + D     VA  L  EG 
Sbjct: 62  EIQTEIRSRFMSAVVEAKPKKLPAV--RAEVDVGNLTTKQREIADARMALVAYVLELEGS 119

Query: 118 RNFLARLDI 126
            + +  +  
Sbjct: 120 MSRIKAITY 128


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 81.9 bits (200), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++N +T +E+A   G++     VNR  R++ W   +  GV+GG          +   +Q 
Sbjct: 1   MKNWVTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGGGYEYSFSSLPL--EVQT 58

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA-IDNMTDIEQEK 107
                ++  L   +E            A+  + +A  +     E+  
Sbjct: 59  EYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRF 105


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score = 81.9 bits (200), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 12/101 (11%)

Query: 27  WIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGAR 86
             R +GW + +  GV+G      +                 T  L+  +E  A Y    +
Sbjct: 1   MARREGWNSRRRKGVQGKALEYHIDSLPA-----------GTRNLLVLKEEPASYQVERK 49

Query: 87  APAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127
            P     I    ++T+ E+EKV  FL REGI + LAR+  D
Sbjct: 50  DPL-VVWIEYYYHLTECEREKVLAFLIREGIGSLLARISAD 89


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JV30_PASHA
          Length = 656

 Score = 81.5 bits (199), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++     +E+A   GV     +V+R   ++GW+  +  GV+G      L    +      
Sbjct: 1   MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVTYEYHLTSLPIET---- 56

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKV 108
                    L    +  AE  P    PA   +I  ++N TD  ++K 
Sbjct: 57  QQQLRLNAALAVIPQA-AELQPKRDDPA---LIARLNNATDKGRDKA 99


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score = 80.4 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 1/112 (0%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           MK  ++  T  ELA  LGV  + V    R +GW+  + PG  GG   L+ V       + 
Sbjct: 1   MKTFKDAYTAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGNEWLV-VSMPEGTALA 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
              A   T +   A +     +  +   A   +            + V  +L
Sbjct: 60  VRMAEERTAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALARLDLVRLYL 111


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 80.0 bits (195), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 1   MKRLRNKMTTEELAECLGVA-KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           M   +   TT +L   LG++ + TV R    +GW +    G  GG   L+     + +  
Sbjct: 1   MASPKEAYTTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGNEWLLAS---MPKST 57

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA----IDNMTDIEQEKVAQFLSRE 115
           +            +  E+     P   A   R+ I A    + + ++ ++E     L+  
Sbjct: 58  RKALLDGMLRTAAQEAEKNLPALPPLDAADPRRAIAARMSPLKHCSNRQREIAMARLALI 117

Query: 116 GIRNFLARLDIDESA 130
                LA L   ++A
Sbjct: 118 REVERLAVLTGVDAA 132


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 79.6 bits (194), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 10/121 (8%)

Query: 4   LRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTP 63
            +++ + +ELA  +G++ Q + +   ++GW  E   G  G R         V    +   
Sbjct: 9   TKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIAR 68

Query: 64  AFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLAR 123
                     A E          +P       A + + D+E+EK  + L +E      AR
Sbjct: 69  QRAAQAAAAIAPE----------SPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFAR 118

Query: 124 L 124
           L
Sbjct: 119 L 119


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 78.1 bits (190), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF--- 58
           +   ++ +E A   G+      V    +++GW+     GVKGG+A     ++   E    
Sbjct: 1   MELWVSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAA 60

Query: 59  -IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLS 113
            +        +    E      E     R   + +  NA    +D ++    ++L 
Sbjct: 61  LLLRQGEIETSLGYFEIARPTLEAHDYDREALWSKWDNA----SDSQRRLAEKWLP 112


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
           RepID=A1RM55_SHESW
          Length = 727

 Score = 75.0 bits (182), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 14/113 (12%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            L   +T +EL +   +   +  V R  + +GW   K  G  GG            E+  
Sbjct: 1   MLDIWLTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG-----------FEYHL 49

Query: 61  NTPAFHNTPM-LMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
           N+         L E  +             + +      N +  E+    +F+
Sbjct: 50  NSLPLAAQQHILSEKTKAQIAKKTEQAKTLHEKFSGEKKNASKDEKTAALRFM 102


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 75.0 bits (182), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 8/91 (8%)

Query: 1  MKRL--RNKMTTEELAECLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
          M  +  +   T  E+A    + +Q   V R   +  W   +  G +G             
Sbjct: 1  MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGVAFEYHYSSLP-- 58

Query: 57 EFIQNTPAFHNTPMLMEAEERIAEYAPGARA 87
            I            ++ E R    A  A  
Sbjct: 59 --ISVQQELGFAQTAVKEEPRTLVAAQTADE 87


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 75.0 bits (182), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 28/111 (25%), Gaps = 14/111 (12%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           +    + +ELA   GV    + V      K W   +  G K              E+  +
Sbjct: 1   MSEWFSAQELAGLPGVPGTARNVKAMAERKSWSGRRRVGTK------------AIEYHVS 48

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
                    L+ A           +      +      +    ++ V   L
Sbjct: 49  ALPKETRAALLNAALGEVATKAVRQETQLALVETNRQQLVADARQGVLHAL 99


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor
          NM305 RepID=C5S4R0_9PAST
          Length = 179

 Score = 74.6 bits (181), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 1  MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
          M   +   +  ELA   G+    Q +N+  R + W+     GV+GG              
Sbjct: 1  MGNFKEWFSASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGGAVEYHYTSFPENVQ 60

Query: 59 IQ 60
            
Sbjct: 61 QA 62


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
           RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 74.2 bits (180), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 12/128 (9%)

Query: 2   KRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
             +   MT +++ E  G+    Q V++  +++GW      G +G             E+I
Sbjct: 5   NEINQWMTPKQITELDGMPGTIQGVHKRAKKEGWPKRSQEGRRG----------PGVEYI 54

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
              PA     +     + +  ++         ++     NM       + Q      +  
Sbjct: 55  PAIPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSGLMQERPSISVDT 114

Query: 120 FLARLDID 127
            LA L ID
Sbjct: 115 LLATLGID 122


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
           RepID=B8GS44_THISH
          Length = 671

 Score = 73.1 bits (177), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 27/114 (23%), Gaps = 5/114 (4%)

Query: 2   KRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF- 58
            R     + + LA   G+   +Q V    +  GW   K  G KGG          +    
Sbjct: 3   AREEQWFSAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSG-KGGGREYAFSSLPIATQA 61

Query: 59  -IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQF 111
            +                E             +        ++    + + A  
Sbjct: 62  ALLKAAEPAARAARAAQGEPAGAPGEYDAEALWAWAATRPASLQKEGERRAALL 115


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
          RepID=B0UVF4_HAES2
          Length = 145

 Score = 71.9 bits (174), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++   T +EL +  G+    Q +  + ++  W+  +  GVKG      + D         
Sbjct: 1  MKEWYTLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKGNVFEYYVYDMPESVQTSL 60

Query: 62 TPAFHNTPMLMEAEE 76
                  +  E  +
Sbjct: 61 GVTKETLALKQELID 75


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
           RepID=A9L0K4_SHEB9
          Length = 738

 Score = 69.2 bits (167), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 27/127 (21%)

Query: 3   RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
             +   +T E+AE L V  + V    +++ W+ ++  G+ GG            E+  N+
Sbjct: 1   MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG-----------FEYHLNS 49

Query: 63  PAFHNTPMLMEAEERIAEYAPGA----------------RAPAYRQIINAIDNMTDIEQE 106
                   L + E      +P +                      + I    N+ D  Q+
Sbjct: 50  LPLEARQKLAKQEAEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSIQQFINLPDKAQK 109

Query: 107 KVAQFLS 113
           +    + 
Sbjct: 110 RADAKML 116


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
          RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 68.4 bits (165), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 1  MKRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
          MK  +      +LA    ++     V R  +++GW   +  G+KGG              
Sbjct: 1  MKSKKEWYLPRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGGGFEYHYSSLPP--- 57

Query: 59 IQNTPAFHNTPMLMEAEERIAE 80
               A    P   + E   A 
Sbjct: 58 -AVQQALGFKPNEAKKEPLPAA 78


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 65.4 bits (157), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 13/74 (17%)

Query: 4  LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++      EL +  G+      + +  +  GWK+ K  G            ++  E+  +
Sbjct: 1  MKEWFLASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRG-----------QSRALEYHIS 49

Query: 62 TPAFHNTPMLMEAE 75
          +    +   L E  
Sbjct: 50 SFDERDLAELREKY 63


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4
          Tax=Desulfovibrio RepID=Q30W02_DESDG
          Length = 708

 Score = 64.6 bits (155), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 1  MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV-DTQVCEFI 59
          M + ++  T +ELA  L V   T+ R    +GW++    G  GG   +I          +
Sbjct: 1  MAKAKDAYTAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGNEWIISSMPEATRTKL 60

Query: 60 QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA 96
              A      L  A +     A  + +   + +  A
Sbjct: 61 LAACAQDQLDALDRAPKLTLATAAVSESKKSKALARA 97


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 62.7 bits (150), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 8/123 (6%)

Query: 5   RNKMTTEELA--ECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           ++  T  ELA     GV   +Q V      + W   +    KG      L         Q
Sbjct: 6   KSHYTAPELAMLGLPGVPTTEQGVRYSATREKWAARRRA--KGKGLEYALDSLPAEA--Q 61

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                  +  L+ +       A   R    + +      +    ++ +   L R   +  
Sbjct: 62  AAIRHRASAALVTSVPAQPAKAVIRREQQLQLVETDAQRLRADARKGILSILDRIMAQCR 121

Query: 121 LAR 123
           ++R
Sbjct: 122 VSR 124


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 61.1 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 10/129 (7%)

Query: 1   MKRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           M  L+   + +EL       L   K+ V    + + W++ K  G  GG     L      
Sbjct: 1   MCELKPYYSAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGG-VEYALSSLP-- 57

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
           + +Q          ++  + +        ++     +        D     VA  L  E 
Sbjct: 58  QEVQEEIRDKFATSVVAGKPKKLPVL---KSVVLEDLTEKQRQAADARMTLVAYILQLEQ 114

Query: 117 IRNFLARLD 125
            +     + 
Sbjct: 115 AQPRYKAVK 123


>UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IMZ2_RHOCS
          Length = 191

 Score = 59.2 bits (141), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 2   KRLRNKMTTEELAE--CLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
            R+R   +  ELA     G+   K  + R  R + W+  +  G  G R    +       
Sbjct: 38  GRVREWFSAAELAGVRLPGLPATKAGITRLARAEAWRVREVHGRGGIRFEYHVTSLPPRA 97

Query: 58  F-IQNTPAFHNTPMLM-EAEERIAEYAP 83
           F           P    E  E     AP
Sbjct: 98  FDQLIALIVEAIPEPEPERIELRLPAAP 125


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
          RepID=Q125Z1_POLSJ
          Length = 772

 Score = 58.4 bits (139), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 5  RNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
          ++ +T  EL     +   K+ V+R     GW+  +  G  G R    +         +  
Sbjct: 6  KDWLTANELLGLPNMPADKRGVHRKALASGWQYREVAGNGGTRREYHVASLPATT--RAA 63

Query: 63 PAFHNTPMLM 72
           ++H T +L 
Sbjct: 64 LSWHTTAVLA 73


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
           RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 58.0 bits (138), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 4   LRNKMTTEELAECLGVAKQTVNRWIREKGWKT-----EKFPGVKGGRARLILVDTQVCEF 58
           +R   T +E+A+  GV+++ +N+  R+  W+       K  G  GG            E+
Sbjct: 1   MRQFFTPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG-----------WEY 49

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
             +         LM      A       A A  ++    + ++   +      L
Sbjct: 50  HVSLFPQAAQARLMVIHGAPANANRNKLADARSKLWARYECLSKDRKAACEARL 103


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 57.3 bits (136), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)

Query: 16 CLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAE 75
            G + + + +    +GW+  +  GVKG           +    Q        P     E
Sbjct: 7  LPG-SDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNE 65

Query: 76 ER 77
           R
Sbjct: 66 PR 67


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 56.9 bits (135), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          +    +  +LA   G+  + Q VN+  R++ W+ ++  G +G      +         Q 
Sbjct: 1  MNEWFSASDLAGVKGMPSSPQGVNKKARQELWQKQQQIGKQGKAFEYHISSLPP--ETQQ 58

Query: 62 TPAFHNTPMLMEAEERIAE 80
                   ++   E   +
Sbjct: 59 ALRLQAALAVVPIAEMTVQ 77


>UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=A8I7J2_AZOC5
          Length = 725

 Score = 54.6 bits (129), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 4   LRNKMTTEELAECL----GVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQV---C 56
           +++  T  E+A         +++ V +      W + +     GGR    L         
Sbjct: 1   MKSWFTAAEIAGLGLPDIPESERGVRKMAGRDAWPSREREASGGGR-EYPLSALPTAARA 59

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
            ++       + P+ +         A  A   A  Q    +  +  +E    +  + R+ 
Sbjct: 60  AYVARHLQALDVPVEVVRAAASEPEAELAAPAALDQRDGRLAILAAVEDFAASAGIGRKR 119

Query: 117 IRNFL 121
                
Sbjct: 120 ADTLF 124


>UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISS2_RHOCS
          Length = 710

 Score = 54.2 bits (128), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 31/110 (28%), Gaps = 5/110 (4%)

Query: 4   LRNKMTTEELAECL----GVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           +++  T  ELA+         ++ +       GW++ +     GGR    L        +
Sbjct: 1   MKDWFTAAELADLQLPAIASTERGIRGQATRGGWESRQRAARGGGR-EYPLSALPEEARL 59

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVA 109
           +            E        + G              ++ ++E +   
Sbjct: 60  ELARRAAAEAGDYEKPTPPKRKSVGPAPQNVNVATMPEKHLAEMEAKAAV 109


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 54.2 bits (128), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 13/85 (15%)

Query: 40  GVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDN 99
           G++G             E+  ++   + +  +    E     +       +   INA   
Sbjct: 2   GIQGKGI----------EYFIDSLPDNVSTYIYHHSELFERISIQEHFDIW---INAFKQ 48

Query: 100 MTDIEQEKVAQFLSREGIRNFLARL 124
           +T  E+ K ++++ REGI +    L
Sbjct: 49  LTPSERYKFSEYILREGIISIYKNL 73


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 53.8 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLIL 50
          +       +LA   G+    + V +    +GWK +K  G  GG     +
Sbjct: 1  MSEWFMPTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGG-YEYHV 48


>UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- RepID=A9MJ52_SALAR
          Length = 124

 Score = 53.0 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T +E     G   ++  V   + +         G +G R +   + ++  EF  
Sbjct: 1   MAKEWFTVKECLGLPGFPGSEPAVRERLYKYS------EGKEGVRRK--RLKSKAEEFHI 52

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYR-QIINAIDNMTDIEQEKVAQFLSREGIRN 119
           +    +    L E  E         +    +         +T  ++++V      +G++ 
Sbjct: 53  SVFPLYVHRYLDEGGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVTGLFRVKGMKA 112

Query: 120 FLARL 124
               L
Sbjct: 113 VFPFL 117


>UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9ICZ8_BORPD
          Length = 653

 Score = 52.6 bits (124), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 9/115 (7%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             ++    +ELA    +    Q +N   +   W++    G   G          V    Q
Sbjct: 1   MTQDWFAAQELAGLPAMPATVQGINHRAKTSAWQSRPRAGRG-GGREYAFASLPV--ETQ 57

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
                  TP         A    G     +         + D    +++   + E
Sbjct: 58  AALLKRTTPAAPARPAPAAPDRAG----LWEAYERRPQTLKDEAARRLSALQAVE 108


>UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W6I7_MAGSA
          Length = 193

 Score = 51.9 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 3   RLRNKMTTEEL--AECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           R++   T  EL      G+  +K  V R  RE+GW TEK P   G R            F
Sbjct: 42  RIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEKVPCQGGERHAYHFTSLPRRAF 101


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 51.9 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 10/111 (9%)

Query: 3   RLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
            L+   +  ELA      L  A + +    + + WK++K  G  GG     L    +   
Sbjct: 5   SLKTHYSVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG-LEYELASLPI--E 61

Query: 59  IQNTPAFHNTPML-MEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKV 108
           +QN      TP     A ++I E  P A    ++    A  +    EQ K+
Sbjct: 62  VQNELLLKTTPEQTAVALQKIEETRPLASNEVWQLWDEA--SAKAQEQAKI 110


>UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella enterica
           RepID=B4TBP2_SALHS
          Length = 124

 Score = 51.5 bits (121), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 33/126 (26%), Gaps = 13/126 (10%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIRE--KGWKTEKFPGVKGGRARLILVDTQVCEF 58
             +   T +E     G   ++  V   + +  +G +  +   VK       +    +   
Sbjct: 1   MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVKSKAEEFHISVFPLY-- 58

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
                  H        E      +     P           +T  ++++V       G++
Sbjct: 59  ------VHRYLDDSGEEPTPEPISLQEAEPEDI-WEMMFRLLTPEQRKQVTGRFKVRGMK 111

Query: 119 NFLARL 124
                L
Sbjct: 112 AVFPFL 117


>UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisseriaceae
           RepID=C0DX48_EIKCO
          Length = 548

 Score = 48.8 bits (114), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 9/104 (8%)

Query: 1   MKRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           MK +   ++  ELA+     L    + ++   + + W   +     GG     +      
Sbjct: 1   MKAMSEYLSAAELAQLSIPSLPKTPKGISDKAKREYWPNRRRAQRGGG-VEYQVAGLPEE 59

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNM 100
                  A           +      P          +  ++ +
Sbjct: 60  ----IQAAVRERQAEQLLAQSQPAVLPSVAKAKRPVAVRRMEQL 99


>UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4
          RepID=C6XCG7_METSD
          Length = 232

 Score = 48.4 bits (113), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 20/95 (21%), Gaps = 7/95 (7%)

Query: 2  KRLRNKMTTEELAEC-------LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ 54
            ++   +  ELA         L  + +      + + W + +  G  G    L      
Sbjct: 1  MGIKQWFSASELALLSQHLVVRLPNSVRGCRDKAKREAWPSRQVNGKGGPNGILNEYMPP 60

Query: 55 VCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPA 89
                        P    +  R            
Sbjct: 61 PELSEAIRVFLEARPDFFGSVPRAKMVEVFHDESL 95


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FGN6_DESAA
          Length = 653

 Score = 48.0 bits (112), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 5/111 (4%)

Query: 3   RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
             +   T +E+A+ +G+ +++V R   ++GW         G +         +       
Sbjct: 1   MEKRTWTAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAHSGLPIPVQASLL 60

Query: 63  PAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLS 113
             +       + ++             +         + D    ++   L+
Sbjct: 61  KTYAPKKEAPKPKKGDICS-----EVLHEVFDRKSQKLKDQAAFRLDVVLA 106


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 47.2 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 10/134 (7%)

Query: 6   NKMTTEELA--ECLGV--AKQTVNRWIREKGWKT-----EKFPGVKGGRARLILVDTQVC 56
              +  +LA      +   K+ +N     +GW        +  G  GG          + 
Sbjct: 9   EWWSAADLAEAGLPDLPGTKRKINLLAEREGWARHAGKVRRRKGAGGG-VEYHWSLLPIR 67

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
             ++ +    N+P     ++   E    A   A  +    ++ + ++E    A       
Sbjct: 68  ARMRLSADLVNSPAARPGKDEAWERYAAAGDKARTEAEARLEAIAEVELLVGAGLTRSAA 127

Query: 117 IRNFLARLDIDESA 130
           +R    +L   E +
Sbjct: 128 VREVARKLGRSEKS 141


>UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D935_LARHH
          Length = 241

 Score = 46.9 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 4/125 (3%)

Query: 4   LRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
            +   +  ELA      L   ++ +       GW+ ++    KG    +  +  +    I
Sbjct: 5   NKTHFSAVELAAMKIAGLPATERGIRLCAERDGWQWQRKNKGKGFEYAITSLPQEAQAEI 64

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
           +   A         +     +     R       +  ++ +T  ++       +  G   
Sbjct: 65  RRRQAQELLESSAASITLPGKGRSARREEQLNLTLTTVERLTSKQRAVAEARCALVGEVR 124

Query: 120 FLARL 124
            L+R+
Sbjct: 125 KLSRV 129


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 45.3 bits (105), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 15  ECLGVAKQTVNRWIREKGWKTEKFPGVKGGR-ARLILVDTQVCEFIQNTPAFHNTPMLME 73
              G +   V+     +GW  +K  GVKGG+     ++     E  Q       +     
Sbjct: 5   GMPG-SVAGVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTG 63

Query: 74  AEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDES 129
           A+    + +          +IN I+ +   E  K  + LS+ G+   +  +  ++ 
Sbjct: 64  AQANEKQDSSELINKLTTTLINMIEELEPDEARKALKLLSKGGLLALMPLVFNEQK 119


>UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
           RepID=C4GJU9_9NEIS
          Length = 756

 Score = 44.9 bits (104), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 13/132 (9%)

Query: 3   RLRNKMTTEELAECL----GVAKQTVNRWIREKGWKTEKFP---GVKGGRARLILVDTQV 55
             +      EL E          Q +    +++ W   + P   G  G +    L    +
Sbjct: 1   MRKTHFAISELLEMGLEILPNTVQGLYYKAKKENWLFRETPCQGGKGGVKREYALPPAVL 60

Query: 56  CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
               Q   A           E     A              ++  T  ++ +     +R 
Sbjct: 61  DAIWQRRAAAAVAEGAYGQPEPCVAGAAYQGEVLDAG---RLNGSTAAQRGREG---ARI 114

Query: 116 GIRNFLARLDID 127
           G+   + R+  +
Sbjct: 115 GVLRLVERIMAE 126


>UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea
          RepID=Q82XF6_NITEU
          Length = 265

 Score = 44.6 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 8/51 (15%)

Query: 1  MK-RLRNKMTTEELAECLG-------VAKQTVNRWIREKGWKTEKFPGVKG 43
          M   +R   + +ELA+          V+ +      + + W + +  G  G
Sbjct: 1  MNPNIRVWFSADELAKLSPHLVTRIPVSPRQCRERAKREKWLSREVAGKGG 51


>UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GNK0_VIBCH
          Length = 684

 Score = 44.2 bits (102), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 31/109 (28%), Gaps = 9/109 (8%)

Query: 7   KMTTEELAECLGVAKQTVNRW-------IREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
             T +E+     +    V            +   +  K  G K    ++  +  +   ++
Sbjct: 2   WFTAKEIMGAPLMPSSDVRTRGNLDRLTANKPE-QKRKRQGSKAFEYQIDCLPEETRLYL 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKV 108
               A        E+     +    A    + +   A D+  +  ++K 
Sbjct: 61  LRDIAKQ-QTEQAESSRNTRQVVTPASDELWLEYEEATDHKRENTKKKF 108


>UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9JYF3_AGRVS
          Length = 690

 Score = 44.2 bits (102), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 32/114 (28%), Gaps = 9/114 (7%)

Query: 4   LRNKMTTEELA--ECLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           ++   +  ELA  +   +      ++R   E  W+       K            V  + 
Sbjct: 1   MKEWFSLAELAQMQLPDLPHNMAGLHRVATEANWREHPTHARKVKG-----PTKPVWLYH 55

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLS 113
                      +  A   +A     A      Q+    + +++  ++     LS
Sbjct: 56  IALLPAPARTRIEMAASAVAPEEWDAIRTRKNQLWARFERLSNEHRDICKARLS 109


>UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FD28_DESAA
          Length = 682

 Score = 43.8 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 11/131 (8%)

Query: 9   TTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRAR--LILVDTQVCEFIQNTPAFH 66
           T  +LA+ +G  + TV R  +++GW   +    +GG  +         +   IQ      
Sbjct: 8   TCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGGGHQKLYHFNSLPMS--IQRAIIEK 65

Query: 67  NTPMLMEAEERIAEYAPGA-----RAPAYRQIINAIDN--MTDIEQEKVAQFLSREGIRN 119
                        E           AP +           +   E+      LS+     
Sbjct: 66  ELNAQDNGPAPPPESVLTQSSELAAAPGWNMDRAYARRAILEASEKYCTDNGLSKTQADT 125

Query: 120 FLARLDIDESA 130
             + L   ++A
Sbjct: 126 EFSDLFAKKTA 136


>UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae
           RepID=B7UGE5_ECO27
          Length = 680

 Score = 43.0 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 34/121 (28%), Gaps = 14/121 (11%)

Query: 7   KMTTEELAECLGV--AKQTV----NRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +  ELA   G+    Q V    NR          K  G K     +  +  +  + ++
Sbjct: 2   FYSANELAGLPGLPGTVQGVRWTLNRITETHPEWKRKREGTKAFEYHIDCLPAEAQKVLR 61

Query: 61  NTPA---FHNTPMLMEAEERIAEYAPGARAPA-----YRQIINAIDNMTDIEQEKVAQFL 112
                    +  +    E++  +                  +  + ++TD ++      +
Sbjct: 62  KRLTHQVLEDAQLPAVVEQKAVKNVAVRDELEVMVKCPELALREVQSLTDKQKAIADARI 121

Query: 113 S 113
            
Sbjct: 122 L 122


>UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone
          'Hot96_1+Hot96_2' RepID=UPI0001699232
          Length = 150

 Score = 43.0 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++  +T  ELA   G+    ++VNR       +  K    KG    L  +  +   ++  
Sbjct: 1  MKRYLTAAELAGLPGMPGTPRSVNRAGDRGEIERRKKAKGKGWEYSLTSLPAETQRYLTR 60

Query: 62 TPAFHNTPMLMEAEERIAEYAPGARAPAYRQ 92
          T A               E         +++
Sbjct: 61 TAAAEIAKAAPPQPPAPIELPLMPDLTDWQR 91


>UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2WA75_MAGSA
          Length = 733

 Score = 43.0 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 35/142 (24%), Gaps = 17/142 (11%)

Query: 4   LRNKMTTEELA----------ECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDT 53
           + +  +  E A          + + ++ + ++   +   W         GG     +   
Sbjct: 1   MDDWRSAGEWAEAAKAAGVDPDMMPLSGRRLSDHAKASNWPCRPRT-KSGGGVEYHITAL 59

Query: 54  QVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA-----IDNMTDIEQEKV 108
            V   +  +       +     E +            +             ++  +Q + 
Sbjct: 60  PVEARLLISRHELAEAVQAGRAEGMRAVLQETMDARSKLAARTAGLAEFMRLSPAQQREA 119

Query: 109 AQFLSREGI-RNFLARLDIDES 129
               +       F+ RL +   
Sbjct: 120 EAKAAVIDACAAFVRRLGLPAK 141


>UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomonas palustris TIE-1
           RepID=B3QCJ2_RHOPT
          Length = 724

 Score = 42.6 bits (98), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 11/131 (8%)

Query: 4   LRNKMTTEELAE--CLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           ++   T  ELAE    G+   +  + R+   +GW             R         E+ 
Sbjct: 1   MKEWCTARELAEAQLPGLPSTESALIRFAGREGWNDSL------AYVRRRSGRGGGLEYN 54

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
            +                I    P   + A  Q    +      E++     ++      
Sbjct: 55  ISLLPPSARVEFERRHRAILAPQPVEASTA-AQPAENLSERAAKERDARLAIVAAFAAFG 113

Query: 120 FLARLDIDESA 130
              RL     +
Sbjct: 114 RGQRLGNASRS 124


>UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobacteraceae bacterium
           KLH11 RepID=B9NM75_9RHOB
          Length = 531

 Score = 42.2 bits (97), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 18/130 (13%)

Query: 5   RNKMTTEEL--AECLGV--AKQTVNRWIREKGWK-----TEKFPGVKGGRARLILVDTQV 55
           +   T  E+  A    +   ++ V  + +   W+       +  G  GG           
Sbjct: 9   KVWWTATEIGEARLPDMPSTQKGVELFAKRSDWRSHPEWCRQRSGKGGG--WEYNWQLFP 66

Query: 56  CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLS-- 113
               +        P     +         A   +  + + A   +    ++KV   +   
Sbjct: 67  VASRRKLLNDARLPNRDRVDAVPDLADLQAYYESLPEAVKAKAQL----RKKVLCEVLAN 122

Query: 114 -REGIRNFLA 122
            R G+  F A
Sbjct: 123 ERSGLTRFFA 132


>UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6P2B9_9PROT
          Length = 704

 Score = 42.2 bits (97), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 7/119 (5%)

Query: 11  EELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARL--ILVDTQVCEFIQNTPAFHNT 68
           + +A  LGVAK +       + W   +     G +       +   V E I       N 
Sbjct: 8   KTIAVALGVAKSSACDRANREVWPFVEQAARGGQKRLYPLSTLPMPVREAILRHTLKQNQ 67

Query: 69  PMLME--AEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLD 125
           P  +   +    +  AP   AP Y   +     + D +++      +R  I   + RL 
Sbjct: 68  PAGVSTISPAVSSAVAPNTTAPFYPVALPVSHELKDWQRKTAE---ARSAIIAEIKRLS 123


>UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A5F224_VIBC3
          Length = 667

 Score = 41.5 bits (95), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 23/109 (21%), Gaps = 6/109 (5%)

Query: 7   KMTTEELAECLGVAKQTVNRW------IREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            +T +E A   G      N           +     K  G K     + ++  Q    + 
Sbjct: 2   WVTAKECAGVGGFPTDKNNARNRLVKLASGQPDMQRKREGTKAFEFHISILPPQTQAALL 61

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVA 109
                      +    +        R   +       D       + + 
Sbjct: 62  KKTGKVKVGEQVINLPKAKAEKTYCRESLWASWGKTNDKTKQKAHQALR 110


>UniRef50_Q38437 Fragment from genes A and ner (C-terminus of ner and N-terminus
          of A). (Fragment) n=2 Tax=Enterobacteria phage D108
          RepID=Q38437_BPD10
          Length = 85

 Score = 40.3 bits (92), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 7/85 (8%)

Query: 4  LRNKMTTE--ELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQV---C 56
          ++   T +  EL    G      T++   +EK     +  G KG      +    V    
Sbjct: 1  MKEWYTAKRRELLGLAGYQSKPLTLHVRHKEKAGSFRQVAGTKGVSFEFNIKSFPVALRA 60

Query: 57 EFIQNTPAFHNTPMLMEAEERIAEY 81
          E +        +    E      E 
Sbjct: 61 ENLLQQGRIETSQGYFEIARPTLEA 85


>UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6
           RepID=A4EV07_9RHOB
          Length = 210

 Score = 39.9 bits (91), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 26/104 (25%), Gaps = 21/104 (20%)

Query: 7   KMTTEELAE--CLGV--AKQTVNRWIREKGWKTEK-----FPGVKGGRARLILVDTQVCE 57
             + ++LA     G+    + VN     KGW  +       PG  GG             
Sbjct: 11  WWSAKDLASAKLPGLPGTVRGVNLVAERKGWAKQPNAIKHRPGRSGGLF----------- 59

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMT 101
           +  +         L++  E+            +           
Sbjct: 60  YHWSILPLKTRLRLLKDLEKQEPQRLERGEA-WAIYEGLSQKAK 102


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...   106   2e-22
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...   100   2e-20
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...    99   2e-20
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...    95   5e-19
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...    95   1e-18
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...    94   2e-18
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...    92   4e-18
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...    92   6e-18
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...    92   6e-18
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...    92   6e-18
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...    91   7e-18
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...    91   8e-18
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     88   8e-17
UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella...    85   9e-16
UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmone...    85   9e-16
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    84   2e-15
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    83   2e-15
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    82   4e-15
UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...    82   6e-15
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    81   7e-15
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    80   2e-14
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    80   2e-14
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    80   2e-14
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...    79   4e-14
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                79   4e-14
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    79   6e-14
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    78   8e-14
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    77   2e-13
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    76   3e-13
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    76   4e-13
UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    75   5e-13
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    74   2e-12
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...    73   3e-12
UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp...    73   4e-12
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    71   9e-12
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    71   9e-12
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    71   1e-11
UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongens...    71   2e-11
UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9...    70   3e-11
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          70   3e-11
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    69   5e-11
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    68   7e-11
UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rh...    68   9e-11
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    67   2e-10
UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=...    67   2e-10
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    67   2e-10
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    67   2e-10
UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum al...    66   5e-10
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    65   7e-10
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    65   9e-10
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    65   9e-10
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    65   1e-09
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    64   1e-09
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      64   1e-09
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    64   1e-09
UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 Re...    64   2e-09
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    63   2e-09
UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingell...    60   2e-08
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    60   2e-08
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    58   7e-08
UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum ...    58   1e-07
UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 1280...    58   1e-07
UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisser...    57   1e-07
UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magneto...    57   2e-07
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    56   5e-07
UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitroso...    52   6e-06
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    47   2e-04

Sequences not found previously or not previously below threshold:

UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Ente...    50   3e-05
UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria R...    48   7e-05
UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=M...    48   1e-04
UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae...    47   1e-04
UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotr...    45   7e-04
UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=...    44   0.001
UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseoba...    44   0.001
UniRef50_A9IX63 Transposase (Class III) n=3 Tax=Rhizobiales RepI...    44   0.001
UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A...    43   0.003
UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomo...    43   0.004
UniRef50_UPI0001BC5AF0 hypothetical protein FulcA4_02422 n=1 Tax...    42   0.006
UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria ...    41   0.012
UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigell...    41   0.014
UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobactera...    41   0.014
UniRef50_Q0FYW5 Transposase and inactivated derivative n=1 Tax=F...    41   0.016
UniRef50_Q38437 Fragment from genes A and ner (C-terminus of ner...    40   0.025
UniRef50_C3X4D8 Predicted protein n=2 Tax=Oxalobacter formigenes...    39   0.038

>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score =  106 bits (264), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ
Sbjct: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF
Sbjct: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120

Query: 121 LARLDIDESA 130
           LARLDIDESA
Sbjct: 121 LARLDIDESA 130


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score =  100 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 60/126 (47%), Positives = 79/126 (62%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +L++KMT  ELA+CLG+A+QT+NRW+REK W+TE  PGVKGGRARL+++D  V EF+ 
Sbjct: 1   MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLT 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N PA  +        E    Y        +RQI   +  MT  EQ ++   L+REGI  F
Sbjct: 61  NIPARRHLLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGF 120

Query: 121 LARLDI 126
           LARL I
Sbjct: 121 LARLGI 126


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score =   99 bits (247), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL    G+    Q +N+  R +GWK  +  GV+G      +          
Sbjct: 1   MDKEWFSAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQGKALEYHIDSLP------ 54

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                      +  +E   +Y+   + P +   I A   +TD E+EK+  FL REGI+  
Sbjct: 55  -----KPILKQLRLKEDAEKYSLNQQDP-FTIWIEAYRQLTDSEREKLIAFLFREGIQGL 108

Query: 121 LARLDID 127
           + RL  D
Sbjct: 109 IKRLSND 115


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score = 95.4 bits (235), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 13/128 (10%)

Query: 1   MKRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M   +   TT EL    G+ K  Q +N+  ++ GW+  +  GV+G      +      E 
Sbjct: 5   MMMEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLP--EE 62

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T     +P          + +           I     ++  E+ ++   + REG  
Sbjct: 63  VKTTLMRETSPDYAVVTPTNVQEST---------WIQIYHQLSVEERTRLIGHILREGAM 113

Query: 119 NFLARLDI 126
             LARL+ 
Sbjct: 114 GMLARLEN 121


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score = 94.6 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
                    EL    G+    Q +N   R +GW + +  GV+G      +    +     
Sbjct: 1   MKNEWFAARELTGIAGLPSSPQGINLMARREGWISRRRKGVQGKAVEYHINSLPIGA--- 57

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                     L+  +E  AEY    + P     +    ++++ E+EKV  FL REGI + 
Sbjct: 58  --------RSLLVLQEDPAEYQLERQDPL-AVWVEYYYHLSESEREKVLTFLMREGIDSL 108

Query: 121 LARLDIDE 128
           LA +  +E
Sbjct: 109 LALIAAEE 116


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score = 93.8 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 7/128 (5%)

Query: 3   RLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ--VCEF 58
             +   TT EL    G+ K  Q +N+  ++ GW+  +  GV+G      +      V   
Sbjct: 1   MEKTWFTTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLPEEVKAT 60

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           +        T M   A + ++  + GA+   +   I     ++  E+ ++   + REG  
Sbjct: 61  LMRATLMGTTLMRETAPDYVSAASAGAQEYTW---IQIYHQLSAEERTRLIGHILREGAM 117

Query: 119 NFLARLDI 126
           + LARL+ 
Sbjct: 118 SVLARLEN 125


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score = 92.3 bits (227), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  EL    G+    Q VN   + + W  +K    +G                 
Sbjct: 1   MKKEWYTAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQGNGVEYHYSCLP------ 54

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                  T + +E  E +A Y      P     + A   + D EQ+ V + + R+GIR+F
Sbjct: 55  -----EETLIALELYEPLAHYKLNKEEPL-VIWVKAFQQLNDGEQKTVTELILRDGIRSF 108

Query: 121 LARLDID 127
           L ++  D
Sbjct: 109 LEKIVKD 115


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score = 91.9 bits (226), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 14/125 (11%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +ELA   G     Q +N+  + +GW+ ++  GV+G      +          
Sbjct: 1   MNKEWYSAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQGKAVEYHISCFPPEVV-- 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                      + A +  A+Y   +  P      + +  M++ E++KV   + R GI  F
Sbjct: 59  ---------DELLARDEQAQYLISSNQPEK-VWYSILLQMSEEERKKVTSLILRIGINEF 108

Query: 121 LARLD 125
           L RL 
Sbjct: 109 LRRLG 113


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score = 91.9 bits (226), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 1   MKRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M+  +  + T EL    G+ K  Q +NR  RE+GW+  +  G +G             + 
Sbjct: 1   MEIKKEWIATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARGKAVEYSWHSLP--DM 58

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
           ++ T +    P   +   +                      ++D E++ +  F+ REG+ 
Sbjct: 59  VKKTLSLRTNPAEYQLSPQETSAT----------WNEIYRQLSDAERDFIVSFIVREGVL 108

Query: 119 NFLARLDIDE 128
           N L RLD  +
Sbjct: 109 NLLKRLDYPD 118


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score = 91.9 bits (226), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 14/127 (11%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +     +ELA   G+    Q +N   + +GW+  +  GV+G      +    +   I 
Sbjct: 1   MKKEWFAAKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQGKAVEYHIGSLPIT--IL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
           N+             E  A+YA   + P     + A    T+ E+E+V  F+ REG ++ 
Sbjct: 59  NSLQLR---------EEPAQYATTRQDPL-TLWVEAYYRFTEAEREQVISFIFREGAKSL 108

Query: 121 LARLDID 127
           + RL++D
Sbjct: 109 IERLEMD 115


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score = 91.5 bits (225), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 1/128 (0%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           M +    MT  EL E  G   Q ++RW R+ GWK     G KGG   LIL+  QV ++  
Sbjct: 1   MNQFTRWMTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGGAL-LILITQQVYDYFL 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
            T     +  L    E               Q I  ++ ++  EQ ++++ +S EG    
Sbjct: 60  ATDKLRYSAHLYNRIEETPAPYVTWDNEMMAQFIRTLEMLSPQEQARLSELISEEGAAGL 119

Query: 121 LARLDIDE 128
           + RL + +
Sbjct: 120 VKRLGLRD 127


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score = 91.5 bits (225), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 3   RLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            ++  +T +EL    G+    Q +N   R + W + K  G++G      +    +     
Sbjct: 1   MIKEWLTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQGKALEYHISSIPID---- 56

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                          E    Y       A+     A + ++  E+  V  F+ R+G    
Sbjct: 57  -------LEEPTVMYEAPRIYHVKRDEHAH-IWQEAYNQLSHDERVAVLSFIMRKGALAL 108

Query: 121 LARL 124
           +  +
Sbjct: 109 IDLI 112


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 88.0 bits (216), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 12/129 (9%)

Query: 4   LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++     +EL    GV K    + R    + W   +  G KG                 N
Sbjct: 6   IKEWFNAKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGVAYEYH----------IN 55

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFL 121
           +        +  A                 ++I A+  +T  EQ    + +   GI+  +
Sbjct: 56  SLPEETRRAIKGASLSDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAGIKGLM 115

Query: 122 ARLDIDESA 130
             +   + A
Sbjct: 116 PTIVSKDKA 124


>UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella enterica
           RepID=B4TBP2_SALHS
          Length = 124

 Score = 84.6 bits (207), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 32/129 (24%), Gaps = 13/129 (10%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIRE--KGWKTEKFPGVKGGRARLILVDTQVCEF 58
             +   T +E     G    +  V   + +  +G +  +   VK       +        
Sbjct: 1   MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVKSKAEEFHISVFP---- 56

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
                  H        E      +     P           +T  ++++V       G++
Sbjct: 57  ----LYVHRYLDDSGEEPTPEPISLQEAEPED-IWEMMFRLLTPEQRKQVTGRFKVRGMK 111

Query: 119 NFLARLDID 127
                L  D
Sbjct: 112 AVFPFLFDD 120


>UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- RepID=A9MJ52_SALAR
          Length = 124

 Score = 84.6 bits (207), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 34/128 (26%), Gaps = 15/128 (11%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIRE--KGWKTEKFPGVKGGRARLILVDTQVCEF 58
             +   T +E     G    +  V   + +  +G +  +   +K       +        
Sbjct: 1   MAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRLKSKAEEFHISVFP---- 56

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYR-QIINAIDNMTDIEQEKVAQFLSREGI 117
                  +    L E  E         +    +         +T  ++++V      +G+
Sbjct: 57  ------LYVHRYLDEGGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVTGLFRVKGM 110

Query: 118 RNFLARLD 125
           +     L 
Sbjct: 111 KAVFPFLF 118


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LBA7_TOLAT
          Length = 741

 Score = 83.8 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 45/125 (36%), Gaps = 7/125 (5%)

Query: 4   LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++    + ELA  +G+ +    V +    + WK  K    KG    +  + ++   ++  
Sbjct: 1   MKEWFISSELAGLVGLPQYQDGVRKKADREDWKNRKRESGKGLEYHISSLPSETRAYLAK 60

Query: 62  TPAFHN-TPMLMEAEERIAEYAPGARAPAYRQII----NAIDNMTDIEQEKVAQFLSREG 116
           T A    + +   A+  +A  A   ++    Q        +  +   ++++    L    
Sbjct: 61  TMASETASAIQDHAKAGVAMAALADKSAVSVQAKIENGRKLIALKPEQRKRADSRLLILQ 120

Query: 117 IRNFL 121
           + +  
Sbjct: 121 VADVF 125


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
           RepID=Q8EJ30_SHEON
          Length = 715

 Score = 83.4 bits (204), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   + +EL +  G+    Q +    + + W++ K  G KG    L  +   + +   
Sbjct: 1   MNKAWFSPQELLQLPGMPTTVQGIRFKAKTESWESRKKEGSKGFEYHLGSLP-PITQAHL 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQF-LSREGIRN 119
              A  NT     A  R     P ++     ++      +   +Q+   +  L    + N
Sbjct: 60  RQQAVKNTTSREVAAARQLIATPASQLVKKTELQQQFLTLPKAKQQVAMERQLLLNDMAN 119

Query: 120 FLA 122
           F+A
Sbjct: 120 FIA 122


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 82.3 bits (201), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 2   KRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           ++ R   T  ELA   G+ K  + VN+   ++GW T +     G      L    V    
Sbjct: 3   EQNREWFTATELANKPGLPKYKRGVNQQASKQGWNTRQVKVRGGSANEYHLSSLPVET-- 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSR 114
           Q      + P  +++     E++       ++   N      D  Q K+   L  
Sbjct: 61  QAALIKQHLPTPVKSSSESTEFS-YDPQALWQHYDNKPQKQKDAAQNKLNLLLQV 114


>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score = 81.9 bits (200), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA----- 55

Query: 68  TPMLMEAEERIAEY-APGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDI 126
                E  E   E  A    AP    ++     MT +EQ++    L REGI   L RL I
Sbjct: 56  -----ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110

Query: 127 DES 129
            +S
Sbjct: 111 RDS 113


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 81.5 bits (199), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 4/131 (3%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV-DTQVCEFI 59
           M  +    +T+ELA  LG+  ++V+   + +GW+     G  GG+  ++     ++ + +
Sbjct: 1   MNTIATTYSTQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGKLWVVSSMPAEIRDRL 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
            +        ++   EE  A  + G+   A          ++D E+  V   L+     +
Sbjct: 61  ASALLRQPAAII---EESAACASIGSNICAPIGTAGNGPALSDRERAIVTARLAFCRELD 117

Query: 120 FLARLDIDESA 130
            +A L   ++A
Sbjct: 118 RIAPLVGKKAA 128


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JV30_PASHA
          Length = 656

 Score = 80.3 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 10/109 (9%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++     +E+A   GV     +V+R   ++GW+  +  GV+G      L    +    Q 
Sbjct: 1   MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVTYEYHLTSLPIETQQQL 60

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQ 110
                     +    + AE  P    PA   +I  ++N TD  ++K   
Sbjct: 61  RL-----NAALAVIPQAAELQPKRDDPA---LIARLNNATDKGRDKAKG 101


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 79.9 bits (195), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 1   MKRLRNKMTTEELAECLGVA-KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           M   +   TT +L   LG++ + TV R    +GW +    G  GG   L+     + +  
Sbjct: 1   MASPKEAYTTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGNEWLLAS---MPKST 57

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA----IDNMTDIEQEKVAQFLSRE 115
           +            +  E+     P   A   R+ I A    + + ++ ++E     L+  
Sbjct: 58  RKALLDGMLRTAAQEAEKNLPALPPLDAADPRRAIAARMSPLKHCSNRQREIAMARLALI 117

Query: 116 GIRNFLARLDIDESA 130
                LA L   ++A
Sbjct: 118 REVERLAVLTGVDAA 132


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W3I3_MARMS
          Length = 216

 Score = 79.9 bits (195), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 11/133 (8%)

Query: 3   RLRNKMTTEELAECLGVAKQT--VNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T  ELA   G+      V R  + + W+  +  G++G             +  Q
Sbjct: 1   MTKEWFTAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVNFEYHASSLP--QETQ 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAP----GARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
                      ++AE   +         A+A  + +       +    +  + + LS + 
Sbjct: 59  EALGLEGVSKPVQAENNDSNMVTIQIYSAKAKTWNKAKPETHMVLP--KGYLPKSLSEQE 116

Query: 117 IRNFLARLDIDES 129
           + N  A L+  +S
Sbjct: 117 LNNLFA-LEAPDS 128


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score = 79.2 bits (193), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 1/112 (0%)

Query: 1   MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           MK  ++  T  ELA  LGV  + V    R +GW+  + PG  GG   L +V       + 
Sbjct: 1   MKTFKDAYTAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGNEWL-VVSMPEGTALA 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
              A   T +   A +     +  +   A   +            + V  +L
Sbjct: 60  VRMAEERTAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALARLDLVRLYL 111


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 79.2 bits (193), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 4   LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRA-RLILVDTQVCEF-- 58
           +   ++ +E A   G+ K    V    +++GW+     GVKGG+A         V     
Sbjct: 1   MELWVSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAA 60

Query: 59  -IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGI 117
            +        +    E      E     R   + +  NA    +D ++    ++L     
Sbjct: 61  LLLRQGEIETSLGYFEIARPTLEAHDYDREALWSKWDNA----SDSQRRLAEKWLPAVQA 116

Query: 118 RNFL 121
            + +
Sbjct: 117 ADEM 120


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 78.8 bits (192), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 8/91 (8%)

Query: 1  MKRL--RNKMTTEELAECLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
          M  +  +   T  E+A    + +Q   V R   +  W   +  G +G           + 
Sbjct: 1  MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGVAFEYHYSSLPIS 60

Query: 57 EFIQNTPAFHNTPMLMEAEERIAEYAPGARA 87
             +   A       ++ E R    A  A  
Sbjct: 61 VQQELGFAQ----TAVKEEPRTLVAAQTADE 87


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 78.0 bits (190), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 4   LRNKMTTEELAECLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++N +T +E+A   G++K    VNR  R++ W   +  GV+GG          +   +Q 
Sbjct: 1   MKNWVTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGGGYEYSFSSLPL--EVQT 58

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA-IDNMTDIEQE 106
                ++  L   +E            A+  + +A  +     E+ 
Sbjct: 59  EYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERR 104


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 76.9 bits (187), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 22/131 (16%)

Query: 3   RLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             +   T+ ELA   G+    + V     ++ W+       KG    +     +    + 
Sbjct: 1   MNKEWYTSTELAGLPGLPSTDRNVRIKAEKENWEKRPREIGKGFEYHIRSFPMETIAHLS 60

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL-SREGIRN 119
                  +   + AE+ +AE                   +   EQ K    L + +G   
Sbjct: 61  RDFLQQKSEGELAAEKLVAE-------------------LAAKEQAKKRHVLNASQGAMR 101

Query: 120 FLARLDIDESA 130
            L  L  ++ A
Sbjct: 102 LLNTLKAEDRA 112


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 76.5 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 8/120 (6%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF-IQ 60
           +   M   ELA   G+    + + +    +GW++ K    KG                  
Sbjct: 1   MNAWMPASELAGLPGLPGTDRGIRKLADREGWQSRKRQ--KGKGLEYSPSSLPEVTRTHL 58

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
              +       +  +   A+YA     P           M D E  +  + ++R GI  F
Sbjct: 59  AHLSVKAAMDEVSKQPEYAQYA--EAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF 115


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 76.1 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 8/129 (6%)

Query: 2   KRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
             L+   + +ELAE     L   KQ V    +++GW T K  GV G      L +    +
Sbjct: 4   NSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGVGGEILEFALSNLP--Q 61

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGI 117
            IQ          ++EA+ +               +      + D     VA  L  EG 
Sbjct: 62  EIQTEIRSRFMSAVVEAKPKKLPAV--RAEVDVGNLTTKQREIADARMALVAYVLELEGS 119

Query: 118 RNFLARLDI 126
            + +  +  
Sbjct: 120 MSRIKAITY 128


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 75.3 bits (183), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 8/123 (6%)

Query: 5   RNKMTTEELA--ECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           ++  T  ELA     GV   +Q V      + W   +    KG      L         Q
Sbjct: 6   KSHYTAPELAMLGLPGVPTTEQGVRYSATREKWAARRRA--KGKGLEYALDSLPAEA--Q 61

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF 120
                  +  L+ +       A   R    + +      +    ++ +   L R   +  
Sbjct: 62  AAIRHRASAALVTSVPAQPAKAVIRREQQLQLVETDAQRLRADARKGILSILDRIMAQCR 121

Query: 121 LAR 123
           ++R
Sbjct: 122 VSR 124


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor NM305
           RepID=C5S4R0_9PAST
          Length = 179

 Score = 73.8 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 26/100 (26%), Gaps = 2/100 (2%)

Query: 1   MKRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           M   +   +  ELA   G+    Q +N+  R + W+     GV+GG              
Sbjct: 1   MGNFKEWFSASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGGAVEYHYTSFPENVQ 60

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAID 98
                    T    +  +      P             + 
Sbjct: 61  QALGFIVSQTEHSNQTRDDFIVQTPSGGEFGLELKTRRLK 100


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score = 72.6 bits (176), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 27  WIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGAR 86
             R +GW + +  GV+G      +                 T  L+  +E  A Y    +
Sbjct: 1   MARREGWNSRRRKGVQGKALEYHIDSLPA-----------GTRNLLVLKEEPASYQVERK 49

Query: 87  APAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDE 128
            P     I    ++T+ E+EKV  FL REGI + LAR+  D+
Sbjct: 50  DPL-VVWIEYYYHLTECEREKVLAFLIREGIGSLLARISADK 90


>UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4
          RepID=C6XCG7_METSD
          Length = 232

 Score = 72.6 bits (176), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 20/95 (21%), Gaps = 7/95 (7%)

Query: 2  KRLRNKMTTEELAEC-------LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ 54
            ++   +  ELA         L  + +      + + W + +  G  G    L      
Sbjct: 1  MGIKQWFSASELALLSQHLVVRLPNSVRGCRDKAKREAWPSRQVNGKGGPNGILNEYMPP 60

Query: 55 VCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPA 89
                        P    +  R            
Sbjct: 61 PELSEAIRVFLEARPDFFGSVPRAKMVEVFHDESL 95


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 71.5 bits (173), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 4   LRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTP 63
            +++ + +ELA  +G++ Q + +   ++GW  E   G  G R         V    +   
Sbjct: 9   TKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIAR 68

Query: 64  AFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLAR 123
                     A E                   A + + D+E+EK  + L +E      AR
Sbjct: 69  QRAAQAAAAIAPESPEMA----------GYRAARNYLEDLEREKEEKRLIKERGLVEFAR 118

Query: 124 L 124
           L
Sbjct: 119 L 119


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
           RepID=A9L0K4_SHEB9
          Length = 738

 Score = 71.1 bits (172), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 7/125 (5%)

Query: 3   RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI--- 59
             +   +T E+AE L V  + V    +++ W+ ++  G+ GG     L    +       
Sbjct: 1   MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG-FEYHLNSLPLEARQKLA 59

Query: 60  -QNTPAFHNTPMLMEAEERIAEYA--PGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
            Q       +P  +            P        + I    N+ D  Q++    +    
Sbjct: 60  KQEAEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVN 119

Query: 117 IRNFL 121
            +   
Sbjct: 120 AKAKF 124


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
           RepID=B8GS44_THISH
          Length = 671

 Score = 71.1 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 27/114 (23%), Gaps = 5/114 (4%)

Query: 2   KRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF- 58
            R     + + LA   G+   +Q V    +  GW   K  G KGG          +    
Sbjct: 3   AREEQWFSAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSG-KGGGREYAFSSLPIATQA 61

Query: 59  -IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQF 111
            +                E             +        ++    + + A  
Sbjct: 62  ALLKAAEPAARAARAAQGEPAGAPGEYDAEALWAWAATRPASLQKEGERRAALL 115


>UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D935_LARHH
          Length = 241

 Score = 70.7 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 4/131 (3%)

Query: 4   LRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
            +   +  ELA      L   ++ +       GW+ ++    KG    +  +  +    I
Sbjct: 5   NKTHFSAVELAAMKIAGLPATERGIRLCAERDGWQWQRKNKGKGFEYAITSLPQEAQAEI 64

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
           +   A         +     +     R       +  ++ +T  ++       +  G   
Sbjct: 65  RRRQAQELLESSAASITLPGKGRSARREEQLNLTLTTVERLTSKQRAVAEARCALVGEVR 124

Query: 120 FLARLDIDESA 130
            L+R+   ++A
Sbjct: 125 KLSRVMGVKAA 135


>UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9JYF3_AGRVS
          Length = 690

 Score = 69.9 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 36/129 (27%), Gaps = 12/129 (9%)

Query: 4   LRNKMTTEELAE--CLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           ++   +  ELA+     +      ++R   E  W+       K            V  + 
Sbjct: 1   MKEWFSLAELAQMQLPDLPHNMAGLHRVATEANWREHPTHARKVKG-----PTKPVWLYH 55

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
                      +  A   +A     A      Q+    + +++  ++     LS   +  
Sbjct: 56  IALLPAPARTRIEMAASAVAPEEWDAIRTRKNQLWARFERLSNEHRDICKARLS---VLC 112

Query: 120 FLARLDIDE 128
            +  L   +
Sbjct: 113 RVETLAAQK 121


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 69.5 bits (168), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           +    + +ELA   GV    + V      K W   +  G K              E+  +
Sbjct: 1   MSEWFSAQELAGLPGVPGTARNVKAMAERKSWSGRRRVGTK------------AIEYHVS 48

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFL 121
                    L+ A           +      +      +    ++ V   L     R   
Sbjct: 49  ALPKETRAALLNAALGEVATKAVRQETQLALVETNRQQLVADARQGVLHALDLMMARTGY 108

Query: 122 AR 123
           +R
Sbjct: 109 SR 110


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 68.8 bits (166), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 10/129 (7%)

Query: 1   MKRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           M  L+   + +EL       L   K+ V    + + W++ K  G  GG     L      
Sbjct: 1   MCELKPYYSAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGG-VEYALSSLP-- 57

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
           + +Q          ++  + +        ++     +        D     VA  L  E 
Sbjct: 58  QEVQEEIRDKFATSVVAGKPKKLPVL---KSVVLEDLTEKQRQAADARMTLVAYILQLEQ 114

Query: 117 IRNFLARLD 125
            +     + 
Sbjct: 115 AQPRYKAVK 123


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
           RepID=A1RM55_SHESW
          Length = 727

 Score = 68.4 bits (165), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 12/112 (10%)

Query: 3   RLRNKMTTEELAECL--GVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            L   +T +EL +       +  V R  + +GW   K  G  GG     L    +     
Sbjct: 1   MLDIWLTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG-FEYHLNSLPLAAQQH 59

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
                     L E  +             + +      N +  E+    +F+
Sbjct: 60  I---------LSEKTKAQIAKKTEQAKTLHEKFSGEKKNASKDEKTAALRFM 102


>UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISS2_RHOCS
          Length = 710

 Score = 68.0 bits (164), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 5/112 (4%)

Query: 4   LRNKMTTEELAECL----GVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
           +++  T  ELA+         ++ +       GW++ +     GGR    L        +
Sbjct: 1   MKDWFTAAELADLQLPAIASTERGIRGQATRGGWESRQRAARGGGR-EYPLSALPEEARL 59

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQF 111
           +            E        + G              ++ ++E +     
Sbjct: 60  ELARRAAAEAGDYEKPTPPKRKSVGPAPQNVNVATMPEKHLAEMEAKAAVVR 111


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
          RepID=B0UVF4_HAES2
          Length = 145

 Score = 67.2 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          ++   T +EL +  G+    Q +  + ++  W+  +  GVKG      + D         
Sbjct: 1  MKEWYTLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKGNVFEYYVYDMPESVQTSL 60

Query: 62 TPAFHNTPMLMEAEE 76
                  +  E  +
Sbjct: 61 GVTKETLALKQELID 75


>UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=A8I7J2_AZOC5
          Length = 725

 Score = 67.2 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 4   LRNKMTTEELAECL----GVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQV---C 56
           +++  T  E+A         +++ V +      W + +     GGR    L         
Sbjct: 1   MKSWFTAAEIAGLGLPDIPESERGVRKMAGRDAWPSREREASGGGR-EYPLSALPTAARA 59

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREG 116
            ++       + P+ +         A  A   A  Q    +  +  +E    +  + R+ 
Sbjct: 60  AYVARHLQALDVPVEVVRAAASEPEAELAAPAALDQRDGRLAILAAVEDFAASAGIGRKR 119

Query: 117 IRNFL 121
                
Sbjct: 120 ADTLF 124


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FGN6_DESAA
          Length = 653

 Score = 66.8 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 5/116 (4%)

Query: 3   RLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNT 62
             +   T +E+A+ +G+ +++V R   ++GW         G +         +       
Sbjct: 1   MEKRTWTAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAHSGLPIPVQASLL 60

Query: 63  PAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
             +       + ++             +         + D    ++   L+   + 
Sbjct: 61  KTYAPKKEAPKPKKGDIC-----SEVLHEVFDRKSQKLKDQAAFRLDVVLAYHRMI 111


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4
          Tax=Desulfovibrio RepID=Q30W02_DESDG
          Length = 708

 Score = 66.8 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 1  MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV-DTQVCEFI 59
          M + ++  T +ELA  L V   T+ R    +GW++    G  GG   +I          +
Sbjct: 1  MAKAKDAYTAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGNEWIISSMPEATRTKL 60

Query: 60 QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA 96
              A      L  A +     A  + +   + +  A
Sbjct: 61 LAACAQDQLDALDRAPKLTLATAAVSESKKSKALARA 97


>UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FD28_DESAA
          Length = 682

 Score = 65.7 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 11/131 (8%)

Query: 9   TTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRAR--LILVDTQVCEFIQNTPAFH 66
           T  +LA+ +G  + TV R  +++GW   +    +GG  +         +   IQ      
Sbjct: 8   TCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGGGHQKLYHFNSLPM--SIQRAIIEK 65

Query: 67  NTPMLMEAEERIAEYAPGA-----RAPAYRQIINAIDN--MTDIEQEKVAQFLSREGIRN 119
                        E           AP +           +   E+      LS+     
Sbjct: 66  ELNAQDNGPAPPPESVLTQSSELAAAPGWNMDRAYARRAILEASEKYCTDNGLSKTQADT 125

Query: 120 FLARLDIDESA 130
             + L   ++A
Sbjct: 126 EFSDLFAKKTA 136


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 64.9 bits (156), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 3/56 (5%)

Query: 4  LRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
          ++      EL +  G+      + +  +  GWK+ K  G +       +      +
Sbjct: 1  MKEWFLASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRG-QSRALEYHISSFDERD 55


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
           RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 64.5 bits (155), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 11/125 (8%)

Query: 1   MKRLRNKMTTEELAECLGVAK--QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           MK  +      +LA    ++     V R  +++GW   +  G+KGG              
Sbjct: 1   MKSKKEWYLPRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGGGFEYHYSSLPPAVQ 60

Query: 59  IQ-----NTPAFHNTPMLMEAEERIA----EYAPGARAPAYRQIINAIDNMTDIEQEKVA 109
                  N       P     E          A  +     +++     +      ++  
Sbjct: 61  QALGFKPNEAKKEPLPAARVGERLKEIDRIMAAISSLEAKVKELEEPTLDSLPDTLDQAE 120

Query: 110 QFLSR 114
           + L R
Sbjct: 121 KRLVR 125


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
           RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 64.5 bits (155), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 16/132 (12%)

Query: 4   LRNKMTTEELAECLGVAKQTVNRWIREKGWKT-----EKFPGVKGGRARLILVDTQVCEF 58
           +R   T +E+A+  GV+++ +N+  R+  W+       K  G  GG            E+
Sbjct: 1   MRQFFTPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG-----------WEY 49

Query: 59  IQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
             +         LM      A       A A  ++    + ++   +      L      
Sbjct: 50  HVSLFPQAAQARLMVIHGAPANANRNKLADARSKLWARYECLSKDRKAACEARLKIVADV 109

Query: 119 NFLARLDIDESA 130
             L    + E+A
Sbjct: 110 ALLITGGLSETA 121


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 64.5 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 8/135 (5%)

Query: 4   LRNKMTTEELA--ECLGV--AKQTVNRWIREKGWKTE----KFPGVKGGRARLILVDTQV 55
            +   +  +LA      +   K+ +N     +GW       +     GG          +
Sbjct: 7   AQEWWSAADLAEAGLPDLPGTKRKINLLAEREGWARHAGKVRRRKGAGGGVEYHWSLLPI 66

Query: 56  CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
              ++ +    N+P     ++   E    A   A  +    ++ + ++E    A      
Sbjct: 67  RARMRLSADLVNSPAARPGKDEAWERYAAAGDKARTEAEARLEAIAEVELLVGAGLTRSA 126

Query: 116 GIRNFLARLDIDESA 130
            +R    +L   E +
Sbjct: 127 AVREVARKLGRSEKS 141


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
           RepID=Q125Z1_POLSJ
          Length = 772

 Score = 64.1 bits (154), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 22/138 (15%)

Query: 4   LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
            ++ +T  EL     +   K+ V+R     GW+  +  G  G R    +         + 
Sbjct: 5   AKDWLTANELLGLPNMPADKRGVHRKALASGWQYREVAGNGGTRREYHVASLPATT--RA 62

Query: 62  TPAFHNTPMLME------------------AEERIAEYAPGARAPAYRQIINAIDNMTDI 103
             ++H T +L                         +  +      A  + +  +  M   
Sbjct: 63  ALSWHTTAVLAGNAGQALQAAAQVGTVEGAKAALKSNLSTHVADTAKAEGLRNLAAMPAN 122

Query: 104 EQEKVAQFLSREGIRNFL 121
           EQ ++   L         
Sbjct: 123 EQRRMDARLQVLQAFEAF 140


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 64.1 bits (154), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 15  ECLGVAKQTVNRWIREKGWKTEKFPGVKGGR-ARLILVDTQVCEFIQNTPAFHNTPMLME 73
              G +   V+     +GW  +K  GVKGG+     ++     E  Q       +     
Sbjct: 5   GMPG-SVAGVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTG 63

Query: 74  AEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDES 129
           A+    + +          +IN I+ +   E  K  + LS+ G+   +  +  ++ 
Sbjct: 64  AQANEKQDSSELINKLTTTLINMIEELEPDEARKALKLLSKGGLLALMPLVFNEQK 119


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 64.1 bits (154), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)

Query: 16 CLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAE 75
            G + + + +    +GW+  +  GVKG           +    Q        P     E
Sbjct: 7  LPG-SDKGIVKKAAREGWQKRQRQGVKGKTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNE 65

Query: 76 ER 77
           R
Sbjct: 66 PR 67


>UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GNK0_VIBCH
          Length = 684

 Score = 63.8 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 33/116 (28%), Gaps = 9/116 (7%)

Query: 7   KMTTEELAECLGVAKQTVNRW-------IREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
             T +E+     +    V            +   +  K  G K    ++  +  +   ++
Sbjct: 2   WFTAKEIMGAPLMPSSDVRTRGNLDRLTANKPE-QKRKRQGSKAFEYQIDCLPEETRLYL 60

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
               A        E+     +    A    + +   A D+  +  ++K    +  +
Sbjct: 61  LRDIAKQ-QTEQAESSRNTRQVVTPASDELWLEYEEATDHKRENTKKKFELCMRVK 115


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
           RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 63.4 bits (152), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 12/128 (9%)

Query: 2   KRLRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
             +   MT +++ E  G+    Q V++  +++GW      G +G             E+I
Sbjct: 5   NEINQWMTPKQITELDGMPGTIQGVHKRAKKEGWPKRSQEGRRG----------PGVEYI 54

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRN 119
              PA     +     + +  ++         ++     NM       + Q      +  
Sbjct: 55  PAIPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSGLMQERPSISVDT 114

Query: 120 FLARLDID 127
            LA L ID
Sbjct: 115 LLATLGID 122


>UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
           RepID=C4GJU9_9NEIS
          Length = 756

 Score = 59.9 bits (143), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)

Query: 3   RLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFP---GVKGGRARLILVDTQV 55
             +      EL E     L    Q +    +++ W   + P   G  G +    L    +
Sbjct: 1   MRKTHFAISELLEMGLEILPNTVQGLYYKAKKENWLFRETPCQGGKGGVKREYALPPAVL 60

Query: 56  CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
               Q   A           E     A              ++  T  ++ +     +R 
Sbjct: 61  DAIWQRRAAAAVAEGAYGQPEPCVAGAAYQGEVLDAG---RLNGSTAAQRGREG---ARI 114

Query: 116 GIRNFLARLDID 127
           G+   + R+  +
Sbjct: 115 GVLRLVERIMAE 126


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 59.9 bits (143), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 4  LRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
          +    +  +LA   G+    Q VN+  R++ W+ ++  G +G      +         Q 
Sbjct: 1  MNEWFSASDLAGVKGMPSSPQGVNKKARQELWQKQQQIGKQGKAFEYHISSLPPET--QQ 58

Query: 62 TPAFHNTPMLMEAEERIAE 80
                   ++   E   +
Sbjct: 59 ALRLQAALAVVPIAEMTVQ 77


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 58.4 bits (139), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 8/117 (6%)

Query: 3   RLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
            L+   +  ELA      L  A + +    + + WK++K  G  GG     L    +   
Sbjct: 5   SLKTHYSVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG-LEYELASLPI--E 61

Query: 59  IQNTPAFHNTPML-MEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSR 114
           +QN      TP     A ++I E  P A    ++    A     +  + K+    + 
Sbjct: 62  VQNELLLKTTPEQTAVALQKIEETRPLASNEVWQLWDEASAKAQEQAKIKLGTMFAV 118


>UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IMZ2_RHOCS
          Length = 191

 Score = 57.6 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 2   KRLRNKMTTEELAE--CLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCE 57
            R+R   +  ELA     G+   K  + R  R + W+  +  G  G R    +       
Sbjct: 38  GRVREWFSAAELAGVRLPGLPATKAGITRLARAEAWRVREVHGRGGIRFEYHVTSLPPRA 97

Query: 58  F-IQNTPAFHNTPMLM-EAEERIAEYAP 83
           F           P    E  E     AP
Sbjct: 98  FDQLIALIVEAIPEPEPERIELRLPAAP 125


>UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9ICZ8_BORPD
          Length = 653

 Score = 57.6 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 9/115 (7%)

Query: 3   RLRNKMTTEELAECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
             ++    +ELA    +    Q +N   +   W++    G   G          V    Q
Sbjct: 1   MTQDWFAAQELAGLPAMPATVQGINHRAKTSAWQSRPRAGRG-GGREYAFASLPVET--Q 57

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
                  TP         A    G     +         + D    +++   + E
Sbjct: 58  AALLKRTTPAAPARPAPAAPDRAG----LWEAYERRPQTLKDEAARRLSALQAVE 108


>UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisseriaceae
           RepID=C0DX48_EIKCO
          Length = 548

 Score = 57.2 bits (136), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 34/136 (25%), Gaps = 20/136 (14%)

Query: 1   MKRLRNKMTTEELAEC----LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVC 56
           MK +   ++  ELA+     L    + ++   + + W   +     GG     +      
Sbjct: 1   MKAMSEYLSAAELAQLSIPSLPKTPKGISDKAKREYWPNRRRAQRGGG-VEYQVAGLPEE 59

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDN-----------MTDIEQ 105
                  A           +      P          +  ++            + D ++
Sbjct: 60  ----IQAAVRERQAEQLLAQSQPAVLPSVAKAKRPVAVRRMEQLGLPIDDYAMGLNDKQR 115

Query: 106 EKVAQFLSREGIRNFL 121
           +     ++       L
Sbjct: 116 DCAHARMALAAEVLRL 131


>UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W6I7_MAGSA
          Length = 193

 Score = 56.8 bits (135), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 3   RLRNKMTTEEL--AECLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEF 58
           R++   T  EL      G+   K  V R  RE+GW TEK P   G R            F
Sbjct: 42  RIKEWFTAAELVALRLPGLPTSKAAVTRIAREQGWTTEKVPCQGGERHAYHFTSLPRRAF 101


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 55.7 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 4  LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLIL 50
          +       +LA   G+    + V +    +GWK +K  G  GG     +
Sbjct: 1  MSEWFMPTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGG-YEYHV 48


>UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea
          RepID=Q82XF6_NITEU
          Length = 265

 Score = 51.8 bits (122), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 8/92 (8%)

Query: 1  MK-RLRNKMTTEELAEC-------LGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVD 52
          M   +R   + +ELA+        + V+ +      + + W + +  G  G R +     
Sbjct: 1  MNPNIRVWFSADELAKLSPHLVTRIPVSPRQCRERAKREKWLSREVAGKGGPRGKKTEFL 60

Query: 53 TQVCEFIQNTPAFHNTPMLMEAEERIAEYAPG 84
                 +        P          E A  
Sbjct: 61 PPENILSEIHQFLSRNPDFFAEAGSSPENATQ 92


>UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae
           RepID=B7UGE5_ECO27
          Length = 680

 Score = 49.5 bits (116), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 34/122 (27%), Gaps = 16/122 (13%)

Query: 8   MTTEELAECLGV--AKQTVNRWIRE-----KGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            +  ELA   G+    Q V   +         W   K  G K     +  +  +  + ++
Sbjct: 3   YSANELAGLPGLPGTVQGVRWTLNRITETHPEW-KRKREGTKAFEYHIDCLPAEAQKVLR 61

Query: 61  NTPA---FHNTPMLMEAEERIAEYAPGARAPA-----YRQIINAIDNMTDIEQEKVAQFL 112
                    +  +    E++  +                  +  + ++TD ++      +
Sbjct: 62  KRLTHQVLEDAQLPAVVEQKAVKNVAVRDELEVMVKCPELALREVQSLTDKQKAIADARI 121

Query: 113 SR 114
             
Sbjct: 122 LL 123


>UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria RepID=D2TQ32_CITRO
          Length = 695

 Score = 48.4 bits (113), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 15/129 (11%)

Query: 9   TTEELAECLGV--AKQTVNRWIREKGWK---TEKFPGVKGGRARLILVDTQVCEFIQNTP 63
           + +EL    G+   +Q V   IR+         +  G KG    +  +     + ++   
Sbjct: 4   SVKELVGLPGMPGTEQGVRYSIRKYATSETSRRRQEGTKGFEYSIDCLPEVTQQALRERY 63

Query: 64  AFHNTPMLMEAEERIAEYAPGARAPA----------YRQIINAIDNMTDIEQEKVAQFLS 113
           A        +                           + ++  ++ +T+ +++     ++
Sbjct: 64  ALQLMTQKADESPAPVVTKARRSPDVVDAVEAYRGSPQLMVERLNALTEKQRQVADARIA 123

Query: 114 REGIRNFLA 122
                   A
Sbjct: 124 IVSEVLKFA 132


>UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2WA75_MAGSA
          Length = 733

 Score = 47.6 bits (111), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 35/142 (24%), Gaps = 17/142 (11%)

Query: 4   LRNKMTTEELA----------ECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDT 53
           + +  +  E A          + + ++ + ++   +   W         GG     +   
Sbjct: 1   MDDWRSAGEWAEAAKAAGVDPDMMPLSGRRLSDHAKASNWPCRPRTKSGGG-VEYHITAL 59

Query: 54  QVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINA-----IDNMTDIEQEKV 108
            V   +  +       +     E +            +             ++  +Q + 
Sbjct: 60  PVEARLLISRHELAEAVQAGRAEGMRAVLQETMDARSKLAARTAGLAEFMRLSPAQQREA 119

Query: 109 AQFLSREGI-RNFLARLDIDES 129
               +       F+ RL +   
Sbjct: 120 EAKAAVIDACAAFVRRLGLPAK 141


>UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae RepID=A9LZ01_NEIM0
          Length = 662

 Score = 47.2 bits (110), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 32/116 (27%), Gaps = 8/116 (6%)

Query: 9   TTEELAEC----LGVAKQTVNRWIREKGWKTEKFPG--VKGGRARLILVDTQVCEFIQNT 62
           T  EL +     L    + +    + + W   +  G    G   + ++        I+  
Sbjct: 4   TIGELLKLNIQGLPTTARGLRERAKTQNWPYIEEVGKARGGRLKKYLIASLP--AEIRAA 61

Query: 63  PAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIR 118
                +  L E   +         A + + +  A   + + ++       +     
Sbjct: 62  IMKRQSDELTEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVADARCAVVAAV 117


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 46.8 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 13/85 (15%)

Query: 40  GVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDN 99
           G++G      +               + +  +    E     +       +   INA   
Sbjct: 2   GIQGKGIEYFIDSLP----------DNVSTYIYHHSELFERISIQEH---FDIWINAFKQ 48

Query: 100 MTDIEQEKVAQFLSREGIRNFLARL 124
           +T  E+ K ++++ REGI +    L
Sbjct: 49  LTPSERYKFSEYILREGIISIYKNL 73


>UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6P2B9_9PROT
          Length = 704

 Score = 45.3 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 4/124 (3%)

Query: 11  EELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV--DTQVCEFIQNTPAFHNT 68
           + +A  LGVAK +       + W   +     G +    L      V E I       N 
Sbjct: 8   KTIAVALGVAKSSACDRANREVWPFVEQAARGGQKRLYPLSTLPMPVREAILRHTLKQNQ 67

Query: 69  PM--LMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDI 126
           P      +    +  AP   AP Y   +     + D +++      +       L++   
Sbjct: 68  PAGVSTISPAVSSAVAPNTTAPFYPVALPVSHELKDWQRKTAEARSAIIAEIKRLSKAAG 127

Query: 127 DESA 130
            E A
Sbjct: 128 MEKA 131


>UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI0001699232
          Length = 150

 Score = 44.1 bits (102), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 15/121 (12%)

Query: 4   LRNKMTTEELAECLGV--AKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQN 61
           ++  +T  ELA   G+    ++VNR       + E+    KG      L           
Sbjct: 1   MKRYLTAAELAGLPGMPGTPRSVNRAGDRG--EIERRKKAKGKGWEYSLTSLPAETQRYL 58

Query: 62  TPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFL 121
           T             +  A                    +TD ++E++   L+   + + L
Sbjct: 59  TRTAAAEIAKAAPPQPPAPIELPLMPD-----------LTDWQREQMHARLAVLSVIDEL 107

Query: 122 A 122
           A
Sbjct: 108 A 108


>UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6
           RepID=A4EV07_9RHOB
          Length = 210

 Score = 44.1 bits (102), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 10/103 (9%)

Query: 7   KMTTEELA--ECLGV--AKQTVNRWIREKGWKTEK-----FPGVKGGRARLILVDTQVCE 57
             + ++LA  +  G+    + VN     KGW  +       PG  GG          +  
Sbjct: 11  WWSAKDLASAKLPGLPGTVRGVNLVAERKGWAKQPNAIKHRPGRSGGLF-YHWSILPLKT 69

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNM 100
            ++                       G    A  + I   D +
Sbjct: 70  RLRLLKDLEKQEPQRLERGEAWAIYEGLSQKAKTEAITRQDAL 112


>UniRef50_A9IX63 Transposase (Class III) n=3 Tax=Rhizobiales RepID=A9IX63_BART1
          Length = 659

 Score = 44.1 bits (102), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 9/112 (8%)

Query: 4   LRNKMTTEELAE--CLGVAK-QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
           ++      ELAE    G+ K +   R I    W+ +     K            + E   
Sbjct: 1   MKEWFRIAELAEAALPGLPKSKGGLRKILATTWRHQSELTRKVKGV-----SRPIVEVHI 55

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
           +         L+       +                 + ++ + + +  + L
Sbjct: 56  SLLPEGARAALLVRFGGAVDVKQTQGEQKTSIW-GRYEGLSKVHKRRCEERL 106


>UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A5F224_VIBC3
          Length = 667

 Score = 43.0 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/119 (9%), Positives = 25/119 (21%), Gaps = 9/119 (7%)

Query: 7   KMTTEELAECLGVA------KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ 60
            +T +E A   G        +  + +    +     K  G K     + ++  Q    + 
Sbjct: 2   WVTAKECAGVGGFPTDKNNARNRLVKLASGQPDMQRKREGTKAFEFHISILPPQTQAALL 61

Query: 61  NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIIN---AIDNMTDIEQEKVAQFLSREG 116
                      +    +        R   +                    V    + E 
Sbjct: 62  KKTGKVKVGEQVINLPKAKAEKTYCRESLWASWGKTNDKTKQKAHQALRCVQAVKALEQ 120


>UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomonas palustris TIE-1
           RepID=B3QCJ2_RHOPT
          Length = 724

 Score = 42.6 bits (98), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 35/125 (28%), Gaps = 10/125 (8%)

Query: 4   LRNKMTTEELA--ECLGV--AKQTVNRWIREKGWK----TEKFPGVKGGRARLILVDTQV 55
           ++   T  ELA  +  G+   +  + R+   +GW       +    +GG     +     
Sbjct: 1   MKEWCTARELAEAQLPGLPSTESALIRFAGREGWNDSLAYVRRRSGRGGGLEYNISLLPP 60

Query: 56  CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSRE 115
               +      +  +L       +  A  A   + R        +  +          R 
Sbjct: 61  SA--RVEFERRHRAILAPQPVEASTAAQPAENLSERAAKERDARLAIVAAFAAFGRGQRL 118

Query: 116 GIRNF 120
           G  + 
Sbjct: 119 GNASR 123


>UniRef50_UPI0001BC5AF0 hypothetical protein FulcA4_02422 n=1 Tax=Fusobacterium ulcerans
           ATCC 49185 RepID=UPI0001BC5AF0
          Length = 629

 Score = 41.8 bits (96), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 36/120 (30%)

Query: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67
            T ++L + L  ++  V R  +E  W+  K       +   +  D +    I      + 
Sbjct: 3   YTVKDLEQKLNKSRYQVMRMAKEYNWQVVKVAENGTTKNYYLASDVEKSLGISTETKENA 62

Query: 68  TPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127
           T  L   ++                    +  +   E  +    L    I+ F+ R   D
Sbjct: 63  TRTLTVIKKEAVAVDELPEWNQRVAWARYMLCLKLDEAYEERGELKEVIIKEFVNRAFED 122


>UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria RepID=B1JIP4_YERPY
          Length = 684

 Score = 41.0 bits (94), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 16/120 (13%)

Query: 8   MTTEELAECLGVA------KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQ----VCE 57
           ++  EL    G+       +  +N+          K  G K     +  +  Q    V E
Sbjct: 3   LSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVVRE 62

Query: 58  FIQNTPAFHNTPMLMEAEERIAEYAPGARAPA------YRQIINAIDNMTDIEQEKVAQF 111
              N+        +  A          A+            +  +  ++T ++++     
Sbjct: 63  RHLNSLLNAEKKAVKTAFNGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIADAR 122


>UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigella dysenteriae Sd197
           RepID=Q32IA5_SHIDS
          Length = 135

 Score = 40.7 bits (93), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/118 (8%), Positives = 28/118 (23%), Gaps = 15/118 (12%)

Query: 9   TTEELAECLGV--AKQTVNRWIREKGWKTE-KFPGVKGGRARLILVDTQV------CEFI 59
           +  EL    G+    Q V   I+++      +            +            E  
Sbjct: 4   SVNELVGLPGMPGTAQGVRYSIKKRASSEHFRRKRAGSKTIEYSIDCLPPITQQALRERH 63

Query: 60  QNTPAFHNTPMLMEAEERIAEYAPGARAPA------YRQIINAIDNMTDIEQEKVAQF 111
                  +   +        E       P        + +   ++ +T+ +++     
Sbjct: 64  VAQLMATDPQEITTQPPVKRERKQNVVQPVEAYRGSPQLVEERLNALTENQRKVAEAL 121


>UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobacteraceae bacterium
           KLH11 RepID=B9NM75_9RHOB
          Length = 531

 Score = 40.7 bits (93), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 32/131 (24%), Gaps = 20/131 (15%)

Query: 5   RNKMTTEEL--AECLGVAK--QTVNRWIREKGWKTE----KFPGVKGGRARLILVDTQVC 56
           +   T  E+  A    +    + V  + +   W++     +    KGG          V 
Sbjct: 9   KVWWTATEIGEARLPDMPSTQKGVELFAKRSDWRSHPEWCRQRSGKGGGWEYNWQLFPV- 67

Query: 57  EFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL---- 112
                  +            R    A    A       +  + +    Q +         
Sbjct: 68  ------ASRRKLLNDARLPNRDRVDAVPDLADLQAYYESLPEAVKAKAQLRKKVLCEVLA 121

Query: 113 -SREGIRNFLA 122
             R G+  F A
Sbjct: 122 NERSGLTRFFA 132


>UniRef50_Q0FYW5 Transposase and inactivated derivative n=1 Tax=Fulvimarina pelagi
           HTCC2506 RepID=Q0FYW5_9RHIZ
          Length = 754

 Score = 40.7 bits (93), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 4   LRNKMTTEELAE----CLGVAKQTVNRWIREKGWKTEK----FPGVKGGRARLILVDTQV 55
           ++  +T  E+A      L   ++ V      + W            +GG     L     
Sbjct: 1   MKEWLTAREIAAESLPQLPQTERAVQLLAEREDWVDHPAFARRRTGRGGGMEYHLRLLPT 60

Query: 56  ---CEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFL 112
                + +              E   A  AP   A A  +    +  +   ++ + +  L
Sbjct: 61  LALVAYKRRHLQIGQVDDRNHVEAETATRAPSLSARASEERDARLAIVNAFDRFRKSCRL 120

Query: 113 SREGIRNFL 121
           + +   +  
Sbjct: 121 NNQASIHLF 129


>UniRef50_Q38437 Fragment from genes A and ner (C-terminus of ner and N-terminus
          of A). (Fragment) n=2 Tax=Enterobacteria phage D108
          RepID=Q38437_BPD10
          Length = 85

 Score = 39.9 bits (91), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 7/85 (8%)

Query: 4  LRNKMTTE--ELAECLGVAKQ--TVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
          ++   T +  EL    G   +  T++   +EK     +  G KG      +    V    
Sbjct: 1  MKEWYTAKRRELLGLAGYQSKPLTLHVRHKEKAGSFRQVAGTKGVSFEFNIKSFPVALRA 60

Query: 60 QNTPAF---HNTPMLMEAEERIAEY 81
          +N         +    E      E 
Sbjct: 61 ENLLQQGRIETSQGYFEIARPTLEA 85


>UniRef50_C3X4D8 Predicted protein n=2 Tax=Oxalobacter formigenes
          RepID=C3X4D8_OXAFO
          Length = 154

 Score = 39.5 bits (90), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 4  LRNKMTTEELAE--CLGVA--KQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFI 59
          ++   T  E+A     G+   K ++     ++GW+ E+  G+ G R    + D  +    
Sbjct: 1  MKILFTAAEIARMRLPGLPTTKSSILSRAAKEGWRYEEQYGIGGIRKVFEIPDHYLVSAH 60

Query: 60 QNTPAFHNTPML 71
          ++          
Sbjct: 61 EDIAEKAARQNA 72


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.304    0.115    0.280 

Lambda     K      H
   0.267   0.0345    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,633,149
Number of Sequences: 3077464
Number of extensions: 10683668
Number of successful extensions: 73801
Number of sequences better than 1.0e-01: 109
Number of HSP's better than  0.1 without gapping: 145
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 73347
Number of HSP's gapped (non-prelim): 334
length of query: 130
length of database: 1,040,396,356
effective HSP length: 95
effective length of query: 35
effective length of database: 748,037,276
effective search space: 26181304660
effective search space used: 26181304660
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 86 (38.0 bits)
