Phyre 2 alignment of P27238 with d1q06a_

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Job Description | P27238
Confidence | 44.01% | Date | Thu Jan 5 11:43:18 GMT 2012
Rank | 46 | Aligned Residues | 38
% Identity | 21% | Template | d1q06a_
SCOP info | Putative DNA-binding domain | Putative DNA-binding domain | DNA-binding N-terminal domain of transcription activators
Resolution | 2.07

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | M | T | T | E | E | L | A | E | C | L | G | V | A | K | Q | T | V | N | R | W | I | R | E | K | G | W | K | T | E | K | F | P | G | V | K | G | G | R | A
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | N | I | S | D | V | A | K | I | T | G | L | T | S | K | A | I | R | F | Y | E | E | K | . | G | L | V | T | P | P | M | R | S | E | N | G | Y | R | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T | . | T |  | S |  |  |  |  |  |  | T | T | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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