Phyre 2 alignment of Q46820 with c2zvsB_

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Job Description | Q46820
Confidence | 98.89% | Date | Thu Jan 5 12:34:45 GMT 2012
Rank | 253 | Aligned Residues | 55
% Identity | 31% | Template | c2zvsB_
PDB info | PDB header:electron transport | Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; | PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli
Resolution | 1.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | L | D | E | Q | K | C | I | G | C | K | R | C | A | I | A | C | P | F | G | V | V | E | M | V | D | T | I | A | Q | K | C | D | L | C | N | Q | R | S | S | G | T | . | . | . | . | . | . | Q | A | C | I | E | V | C | P | T | Q | A | L | R | L | M | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | L | I | T | K | K | C | I | N | C | D | M | C | E | P | E | C | P | N | E | A | I | S | M | G | D | H | I | Y | E | . | . | . | I | N | S | D | K | C | T | E | C | V | G | H | Y | E | T | P | T | C | Q | K | V | C | P | I | P | N | T | I | V | K | D
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  |  | S | S | G | G | G |  | T | T |  |  |  |  |  |  | S | S | S |  |  | . | . | . |  |  | T | T | T |  |  | T | T | T | T | T |  | S | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |  |  |  | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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