BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (160 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 328 3e-89 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 194 1e-48 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 189 3e-47 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 176 2e-43 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 176 3e-43 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 157 1e-37 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 156 2e-37 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 149 4e-35 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 145 6e-34 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 144 1e-33 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 143 2e-33 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 140 2e-32 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 139 2e-32 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 138 5e-32 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 138 5e-32 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 137 1e-31 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 137 1e-31 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 137 1e-31 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 135 3e-31 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 135 4e-31 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 135 6e-31 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 134 8e-31 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 134 1e-30 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 134 1e-30 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 132 3e-30 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 130 1e-29 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 130 1e-29 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 129 3e-29 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 129 5e-29 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 128 6e-29 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 128 6e-29 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 127 1e-28 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 127 1e-28 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 127 1e-28 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 127 2e-28 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 126 2e-28 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 125 3e-28 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 124 2e-27 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 123 2e-27 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 122 3e-27 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 122 4e-27 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 122 5e-27 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 122 5e-27 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 121 7e-27 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 121 7e-27 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 121 7e-27 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 121 9e-27 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 119 2e-26 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 119 4e-26 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 118 8e-26 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 117 8e-26 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 117 1e-25 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 117 1e-25 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 116 3e-25 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 116 3e-25 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 115 3e-25 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 115 4e-25 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 115 4e-25 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 115 5e-25 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 113 2e-24 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 112 5e-24 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 111 7e-24 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 111 7e-24 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 111 8e-24 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 110 2e-23 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 110 2e-23 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 109 3e-23 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 109 3e-23 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 109 3e-23 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 109 3e-23 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 108 6e-23 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 108 6e-23 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 107 9e-23 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 107 1e-22 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 107 1e-22 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 107 1e-22 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 106 2e-22 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 106 3e-22 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 106 3e-22 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 106 3e-22 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 105 4e-22 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 105 6e-22 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 105 6e-22 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 105 6e-22 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 105 6e-22 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 105 7e-22 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 104 7e-22 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 104 1e-21 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 104 1e-21 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 104 1e-21 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 103 2e-21 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 103 2e-21 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 103 2e-21 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 102 3e-21 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 102 3e-21 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 102 3e-21 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 102 4e-21 UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii Cbu... 102 4e-21 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 102 4e-21 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 102 4e-21 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 102 6e-21 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 101 7e-21 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 101 7e-21 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 101 8e-21 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 101 8e-21 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 101 9e-21 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 100 1e-20 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 100 1e-20 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 100 1e-20 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 100 2e-20 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 100 2e-20 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 100 2e-20 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 100 2e-20 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 100 2e-20 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 100 2e-20 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 100 2e-20 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 100 2e-20 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 100 2e-20 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 100 3e-20 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 99 3e-20 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 99 3e-20 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 99 3e-20 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 99 4e-20 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 99 4e-20 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 99 5e-20 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 99 6e-20 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 99 7e-20 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 98 7e-20 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 98 7e-20 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 98 8e-20 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 98 8e-20 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 98 9e-20 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 98 1e-19 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 98 1e-19 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 97 1e-19 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 97 1e-19 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 97 1e-19 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 97 1e-19 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 97 1e-19 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 97 2e-19 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 97 2e-19 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 97 2e-19 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 97 2e-19 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 97 2e-19 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 96 3e-19 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 96 4e-19 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 96 4e-19 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 96 4e-19 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 96 4e-19 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 96 5e-19 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 96 5e-19 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 96 5e-19 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 96 5e-19 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 95 6e-19 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 95 6e-19 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 95 8e-19 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 95 9e-19 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 95 9e-19 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 94 1e-18 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 94 2e-18 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 94 2e-18 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 94 2e-18 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 94 2e-18 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 93 2e-18 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 93 2e-18 UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma lingua... 93 2e-18 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 93 2e-18 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 93 3e-18 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 93 3e-18 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 93 3e-18 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 93 3e-18 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 93 4e-18 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 92 5e-18 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 92 5e-18 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 92 7e-18 UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus ther... 92 7e-18 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 92 7e-18 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 92 8e-18 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 91 8e-18 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 91 9e-18 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 91 9e-18 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 91 1e-17 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 91 2e-17 UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella mult... 91 2e-17 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 91 2e-17 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 90 2e-17 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 90 2e-17 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 90 2e-17 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 90 2e-17 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 90 2e-17 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 90 2e-17 UniRef50_C0YH45 DNA repair protein n=1 Tax=Chryseobacterium gleu... 90 3e-17 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 90 3e-17 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 90 3e-17 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 90 3e-17 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 90 3e-17 UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachiu... 89 3e-17 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 89 3e-17 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 89 4e-17 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 89 4e-17 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 89 4e-17 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 89 4e-17 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 89 5e-17 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 89 5e-17 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 89 6e-17 UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis ala... 89 6e-17 UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candi... 89 6e-17 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 89 6e-17 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 89 7e-17 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 88 7e-17 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 88 8e-17 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 88 9e-17 UniRef50_Q1LP02 DNA repair protein RadC n=2 Tax=Burkholderiales ... 88 1e-16 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 88 1e-16 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 87 1e-16 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 87 1e-16 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 87 2e-16 UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninoge... 87 2e-16 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 87 2e-16 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 87 2e-16 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 87 2e-16 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 87 2e-16 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 87 2e-16 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 87 3e-16 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 86 3e-16 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 86 3e-16 UniRef50_A5FDW5 DNA repair protein RadC n=4 Tax=Flavobacterium j... 86 3e-16 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 86 3e-16 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 86 4e-16 UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio... 86 5e-16 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 86 5e-16 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 86 5e-16 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 86 5e-16 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 86 5e-16 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 86 6e-16 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 86 6e-16 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 85 6e-16 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 85 7e-16 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 85 8e-16 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 85 8e-16 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 85 8e-16 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 84 1e-15 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 84 2e-15 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 84 2e-15 UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproduce... 84 2e-15 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 84 2e-15 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 83 3e-15 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 83 4e-15 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 82 6e-15 UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerot... 82 7e-15 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 328 bits (841), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE Sbjct: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ Sbjct: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL Sbjct: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 94/156 (60%), Positives = 120/156 (76%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 L+P T L AQRT++RA+ LLD++LR+ G+AFTS+ AARDWL+L +A ERE FM+L Sbjct: 25 CLLPTTSGLTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVL 84 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 YL+ Q++L+ ETLFAGS++ +VH REVVK AL FNAAAV+LAHNHPSGD PSQ D+ Sbjct: 85 YLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRN 144 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT RL +AL+LVD++ DHL+VG I SFAE G L Sbjct: 145 ITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/159 (58%), Positives = 121/159 (76%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 MEQ L L Q+TV++AL+LL+ LRETG +FTS+ A RDWL+L++A LEREEF Sbjct: 1 MEQQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEF 60 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L+L+ Q++LIAHETLF G+I+ T+VHPREVVK L N AAVI+AH+HPSG+ PS+A Sbjct: 61 TALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKA 120 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T R+ QAL LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 121 DRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 83/151 (54%), Positives = 112/151 (74%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 TPV ++ QR ++RA+ LL+++ R G +F S+ A + WL+L +A ERE F++LYL+ Q Sbjct: 7 TPVFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQ 66 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 N+L+ HETLF G+I+STEVHPRE+VK AL NAAAVILAHNHPSG PS+AD+ IT + Sbjct: 67 NRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNI 126 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 V+ L LV++RV DH I+G + SFAE G L Sbjct: 127 VKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 85/117 (72%), Positives = 99/117 (84%), Gaps = 1/117 (0%) Query: 44 AARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAA 103 A RD L+ G+ R EF +LYLN QN+LIA ETLF G+I+ TEVHPREV+KRALY NAA Sbjct: 145 AERDVSVLQAFGV-RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAA 203 Query: 104 AVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AV+LAHNHPSG+ TPS+AD+ IT+RLVQAL LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 204 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 74/121 (61%), Positives = 90/121 (74%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 T AAR L+ ++A RE F +LN N +IA E LF G+ISS VHPR V++RAL+ Sbjct: 29 TGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALH 88 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 NAAAV+LAHNHPS +TTPSQADK IT+RL Q L +VD++V DHLIVGG IYSFAEHGL Sbjct: 89 HNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGL 148 Query: 160 L 160 + Sbjct: 149 I 149 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 73/143 (51%), Positives = 103/143 (72%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 QR ++ AL LL++ +R+ F +++ + WL L+++ LERE FM+LYL+ Q++LI E Sbjct: 15 QRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKEV 74 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 + G I+STEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ IT RL +L +D Sbjct: 75 IALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQLD 134 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 ++V DHL+VG ++ SFAE G L Sbjct: 135 VKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 75/160 (46%), Positives = 107/160 (66%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 M Q + P LP Q+ + +AL +L+ LR TS +A + WL+L + RE Sbjct: 1 MPHQPMRASLPTLPFAQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGREC 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FM+L+L+ +++L+A ET+ G+ ++T V+PREVV RAL+ AAV++AHNHP+GD TPSQ Sbjct: 61 FMVLFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+T+T +LV AL +VDIRV DHLI+G + S AE G L Sbjct: 121 ADRTLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 3/137 (2%) Query: 27 LLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 LL R++R G S + +DWL + AGLE E F++LYL+ Q LI E LF G++ Sbjct: 62 LLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEELFRGTL 121 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 + T V+PREVVK AL NAAAV+LAHNHPSG +PS AD+ +TQ L +L +VD+RV DH Sbjct: 122 TQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVDVRVLDH 181 Query: 144 LIVGGRQIYSFAEHGLL 160 IVGG ++ SFAE GLL Sbjct: 182 FIVGGDRVLSFAEQGLL 198 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/148 (47%), Positives = 105/148 (70%), Gaps = 2/148 (1%) Query: 15 LTAQRT--VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 LTA T V RA+ +LD H+ + G TS + +D+L+L++ +RE F +++++ Q+++ Sbjct: 42 LTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRV 101 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 +A+E LF G+I T V+PR +V+RA+ NAA++ILAHNHPSG T PS+ADK +T RL Sbjct: 102 LAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSL 161 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+ +D+RV DH I+G +SFAEHGLL Sbjct: 162 LESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%) Query: 16 TAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 +A + ++ A ++D+ + + G FTS A +D+L+ K+AG E E F +L+L+ +++LI + Sbjct: 26 SADQILEAARQVIDQKM-QRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLIDY 84 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 +F G+I S EVHPREVVK AL NAAAVI++HNHPSG+ PS AD+ +T +L QAL L Sbjct: 85 AEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALAL 144 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 VD+R DH+IV G SFAE GL+ Sbjct: 145 VDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/150 (47%), Positives = 100/150 (66%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P L T + V A+ L+RH R A TS A RD+LKL++ GL E F +L L+ ++ Sbjct: 18 PTLSFTERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRH 77 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +++ ++ LF G+I + VHPREVV+ + AAAVI AHNHPSG + PSQAD+T+T++L Sbjct: 78 RVLRYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQ 137 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AL L+++RV DH+IVG + SFAE G L Sbjct: 138 DALALIEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/148 (50%), Positives = 104/148 (70%), Gaps = 4/148 (2%) Query: 14 PLTAQRTVKRALTLLD-RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 P+T + + A +L +++R+ AFTS+QA +D+L+ K+A E E F ++ L+ Q+Q+ Sbjct: 14 PMTENQILDAAAEILACKYVRKD--AFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQM 71 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I LF G+I ++ V+PREVVK L NAAAVIL HNHPSG +PS ADK IT+RL +A Sbjct: 72 IDFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEA 131 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L L+D+RV DH+I+ G YSFAE+GLL Sbjct: 132 LALIDVRVLDHIII-GEGTYSFAENGLL 158 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 63/123 (51%), Positives = 90/123 (73%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A S RD+L+ ++A ERE F++++L+ QN++I TLF G++S EVHPRE+V+ A Sbjct: 108 ALLSPTITRDFLESQLAEQEREVFLVIFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREA 167 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 + NAA +ILAHNHPSG PS+ADK +T+R+V++ QLVDIRV DHL++G + SFAE Sbjct: 168 VRLNAAGIILAHNHPSGRAEPSRADKMVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAER 227 Query: 158 GLL 160 G + Sbjct: 228 GWI 230 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 73/144 (50%), Positives = 99/144 (68%), Gaps = 4/144 (2%) Query: 18 QRTVKRALTLLD-RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 R ++ A +L+ R++R G F T+ ++L+ K+AG E E F +L+L+ Q++LI + Sbjct: 18 HRVLEEAAEILEQRYVR--GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFK 75 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G++ + V+PREV+K AL NAAAVI AHNHPSGD PSQAD+ ITQRL AL LV Sbjct: 76 ELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLV 135 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 DIRV DH++VG + SFAE G L Sbjct: 136 DIRVLDHVVVGKSSV-SFAERGWL 158 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/123 (52%), Positives = 87/123 (70%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A T + A D+ K K+ G E E F +++LN Q +LIA+ +F G+++ V+PREVVK A Sbjct: 51 AMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLIAYREMFQGTLTCASVYPREVVKAA 110 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 + +NAAAVILAH HPS +T PSQADK IT+RL +AL L+D+ V DH+IVGG S AE Sbjct: 111 ISYNAAAVILAHCHPSKETEPSQADKAITKRLKEALDLIDVCVLDHIIVGGNTTKSMAEM 170 Query: 158 GLL 160 GL+ Sbjct: 171 GLV 173 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A L +R++R G A T+ A +++++ K+ ERE F +L L+ QN+LI + LF G++ Sbjct: 24 AEILANRYVR--GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQGTV 81 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 + V+PREVVK L NAAAVI AHNHPSGD+TPSQAD+ IT+RL L LVD+RV DH Sbjct: 82 DAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVLDH 141 Query: 144 LIVGGRQIYSFAEHGLL 160 IV G SFAE G L Sbjct: 142 -IVTGDTCTSFAERGWL 157 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/142 (45%), Positives = 94/142 (66%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 R +++A+ LL+ + + G +A RD+L+LK+ E F+ ++LN Q+Q++A E L Sbjct: 25 RIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECL 84 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F G++S V+PR VV+RAL NA+A+I +H HPSG PS AD+ IT RL L ++DI Sbjct: 85 FKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDI 144 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 RV DH I+G + YSFAE GLL Sbjct: 145 RVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 95/132 (71%), Gaps = 2/132 (1%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 +R++R G ST+A R++LK K+A LE E F +L L+ Q++++A+E LF G++++ + Sbjct: 23 NRYIR--GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEELFRGTLNAVSI 80 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGG 148 +PRE+VK +L +NA A+IL HNHPSG+ PS ADK IT +L L L+D++V DHLIV G Sbjct: 81 YPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDVQVLDHLIVAG 140 Query: 149 RQIYSFAEHGLL 160 Q+ S AE GL+ Sbjct: 141 TQVVSLAERGLV 152 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/153 (46%), Positives = 102/153 (66%), Gaps = 2/153 (1%) Query: 10 TPVLPLTAQ--RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 TP LT Q R V RAL +L++ + A ++ + D+L+LK+AG E F +++L+ Sbjct: 15 TPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLD 74 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 QN+ IA E LF G+I+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ +T+ Sbjct: 75 CQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTE 134 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 R+ +L L+D+RV DH+IVG YSFAE GLL Sbjct: 135 RICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 3/137 (2%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A L +R++R G AF++ A +++L+ K+ ERE F +L L+ Q++LI + LF G++ Sbjct: 24 AEILANRYVR--GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGTV 81 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 + V+PREVVK L NAAAVI AHNHPSG++TPSQADK IT RL +AL L+D++V DH Sbjct: 82 DAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDH 141 Query: 144 LIVGGRQIYSFAEHGLL 160 ++VG + SFAE GL+ Sbjct: 142 IVVGETCV-SFAERGLI 157 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 7/150 (4%) Query: 18 QRTVKRALTLLDRHLRETGV-------AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 Q + +A L + LRETG+ +F + A ++ ++++ ERE F +L+ + QN Sbjct: 8 QDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLFWDTQN 67 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LI E LF G+I+ +HPRE+VK+AL N++AVIL HNHPSG TPSQ+DK T ++ Sbjct: 68 RLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKIK 127 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QA QL+D+ V DH+IV YSF H L+ Sbjct: 128 QACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/120 (51%), Positives = 89/120 (74%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 S A R +L+L +A L +E F+ L+L+ +N++IA E LF G+++ T V+PREV +RAL Sbjct: 105 SPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAH 164 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 NAA+VI+AHNHPSG TPSQ+D +T+ L +AL L+D+R+ DH +V G ++SFAEHG L Sbjct: 165 NAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 59/121 (48%), Positives = 90/121 (74%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A S + R++L+ ++ G ERE F++++L+ Q++++ H LF+G+++ EVHPRE+V+ A Sbjct: 99 ALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREA 158 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 + NA+AVILAHNHPSG PS+ADK IT+R+++ Q +DIRV DHLI+G + SFAE Sbjct: 159 IKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAER 218 Query: 158 G 158 G Sbjct: 219 G 219 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 3/144 (2%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 A+ V RAL+ + + + + + +LKL + G ++E F++L+L+ Q++LIA E Sbjct: 65 AKELVMRALS---EDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLIAAE 121 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G+++ T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ +T L QAL LV Sbjct: 122 ELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQALALV 181 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 D+R DH I+G SFAE GL+ Sbjct: 182 DVRALDHFIIGDESALSFAERGLI 205 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F QA + +L+L +A E F +L+L+ QN+L+A E LF G+++ T V+PREVV RAL Sbjct: 118 FADPQAVKHYLQLHLAAKGHEVFAVLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRAL 177 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + AAAV+LAHNHPSG PS+AD+ +TQ L AL LVD+RV DH+IVG Q S AE G Sbjct: 178 HHGAAAVVLAHNHPSGSVQPSRADEALTQTLKAALALVDVRVLDHIIVGPGQALSMAETG 237 Query: 159 LL 160 L+ Sbjct: 238 LI 239 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 56/120 (46%), Positives = 87/120 (72%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 S + +D+L+ +++ ERE FM+++L+ Q++++ H +F+G++ EVHPRE+V+ A+ Sbjct: 102 SPEMTKDFLQSQLSDAEREVFMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKV 161 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 NAAAVILAHNHPSG PS+ADK IT+R+++ Q +DI V DH I+G + SFAE G + Sbjct: 162 NAAAVILAHNHPSGCAEPSKADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/135 (50%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A T+L++ L+ G + QA D+L + A L E F +++L+ ++Q++A E LF G+I Sbjct: 52 AATILEQRLQRQGKIHSPDQAG-DYLISRCAHLPHEVFGVVFLDIKHQILATEHLFFGTI 110 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 EVHPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +T+RL +AL L+DIRV DH Sbjct: 111 DGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIRVLDH 170 Query: 144 LIVGGRQIYSFAEHG 158 L++GGRQ S A G Sbjct: 171 LVIGGRQHISLAARG 185 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 63/142 (44%), Positives = 94/142 (66%), Gaps = 1/142 (0%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 R + +A ++ R+ + GV S R + +++A LE EEF ++ L+ QNQL+ E L Sbjct: 16 RILDQARDIISRYY-QRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLLHREIL 74 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F G+++S VHPREV+KR L NAAAVIL HNHPSG+ PS+ D +T++L + L+++D+ Sbjct: 75 FRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELLEILDV 134 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 R+ DH IV G + S AE GL+ Sbjct: 135 RLLDHFIVAGTETVSMAERGLV 156 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 86/120 (71%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 FTS R +L+ ++ +RE FM+L+L+ Q++LI E +F G+I+ V+PRE++K AL Sbjct: 101 FTSPDTVRMYLQTELENKDREIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTAL 160 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + NAAA+ILAHNHPSG +TPS AD+ +T+ + Q +L++IRV DH I+G +SFAE G Sbjct: 161 FCNAAALILAHNHPSGVSTPSMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQG 220 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/145 (50%), Positives = 96/145 (66%), Gaps = 4/145 (2%) Query: 20 TVKRALTLLDRHLR---ETGVAFTSTQAARD-WLKLKMAGLEREEFMMLYLNQQNQLIAH 75 T+ L L R+L E G A + AA +L+ ++ G RE FM L+L+ +++LIA Sbjct: 81 TLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFMALFLDNRHRLIAC 140 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 E LF G+I++ V+PREVV+RAL NAAAVIL+HNHPSGD PS AD IT L QAL + Sbjct: 141 EELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADTRITDELQQALAM 200 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 VD+R+ DH +VG + SFAE GLL Sbjct: 201 VDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A T+L++ L+ G + QA +L + A L E F +++L+ Q+ ++A E LF+G+I Sbjct: 24 AATILEQRLQRQGRIHSPDQAG-SYLVARCAHLSHEIFGVVFLDNQHHILAAEHLFSGTI 82 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 E+HPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +TQRL +AL L+DIRV DH Sbjct: 83 DGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIRVLDH 142 Query: 144 LIVGGRQIYSFAEHG 158 L++GG++ S A G Sbjct: 143 LVIGGQKSVSLAARG 157 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 90/138 (65%), Gaps = 3/138 (2%) Query: 24 ALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 AL L +RHL E G A + + + ++ E F L+L+ +++ IA E LF Sbjct: 85 ALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAALFLDSRHRAIAFEELFT 144 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G+I + E+HPREVV+RAL NAAAV++ HNHPSG+ PS+AD+ +TQRL+QAL LVDIR+ Sbjct: 145 GTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADRAVTQRLLQALGLVDIRL 204 Query: 141 PDHLIVGGRQIYSFAEHG 158 DH ++G + S AE G Sbjct: 205 LDHFVIGDGRPVSLAERG 222 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 86/123 (69%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G F S Q+ +D+L+L + E F +L+ +++LIA E LF G+++ V+PRE+ K Sbjct: 100 GQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVRHRLIAWEELFRGTLTEARVYPREIAK 159 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 RAL+ NAAAVILAHNHP+G+T PS++D +T+ L +AL ++D+ V DH+IVG +Y F Sbjct: 160 RALHHNAAAVILAHNHPTGNTEPSESDVILTRELCRALAMLDVIVLDHMIVGRNHVYGFL 219 Query: 156 EHG 158 EHG Sbjct: 220 EHG 222 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/125 (48%), Positives = 83/125 (66%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G + +A +L+ M E E F L+L+ Q+++I E LF G+++ T +HPREVVK Sbjct: 41 GCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRIICFEELFRGTLNVTNIHPREVVK 100 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 RAL NAAAVI HNHPSG+ PS+ADK IT +L + L L+D+RV DH++VG + S A Sbjct: 101 RALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETLNLIDVRVLDHIVVGAKACISMA 160 Query: 156 EHGLL 160 E GL+ Sbjct: 161 ERGLV 165 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 90/147 (61%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 PL + +K A L + + +++L + +A RE F+ L+L+ QN+LI Sbjct: 25 PLDSDIVLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLI 84 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A+E LF G+I ++PREVVK AL NAA VI+AHNHPSGD PS D+ IT RL+QAL Sbjct: 85 AYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQAL 144 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV+I + DH +VGG Q+ S A G+ Sbjct: 145 MLVEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 59/104 (56%), Positives = 80/104 (76%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ERE FM+L+L+ Q++LI E LF G+I+ + V+PRE++K ALY NAAA+ILAHNHPSG T Sbjct: 118 EREVFMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVT 177 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS +D+ IT+++ A +L++I V DHLIVG YSFAE+ LL Sbjct: 178 EPSYSDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/139 (46%), Positives = 89/139 (64%), Gaps = 3/139 (2%) Query: 25 LTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 L + R+L+E G A TS + +L KM L E F + L+ Q+++I F G Sbjct: 87 LEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQHRIIRFHEFFFG 146 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 SI VHPR + ++ L NAAA+IL HNHPSGD + S+ADK ITQ++V ALQL+D+RV Sbjct: 147 SIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIVSALQLIDVRVL 206 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DHL+VG ++ SFAE+G + Sbjct: 207 DHLVVGHKKCTSFAENGWI 225 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 3/144 (2%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE-FMMLYLNQQNQLIAHE 76 QR +++AL LL+ L + A TS R + +L++ G ER+E F L+L Q+ I+ E Sbjct: 36 QRIIEKALALLESRLINSD-ALTSPVRVRQYCQLQL-GHERDEHFACLFLTAQHHAISFE 93 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 F GSI V+PR +V+R L NAAAVIL HNHPSG + PS AD+ IT RL +AL+L+ Sbjct: 94 IQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALELI 153 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 D+RV DHLIV SFA+ GLL Sbjct: 154 DVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/114 (52%), Positives = 82/114 (71%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+LKL MA ERE F +L+L+++NQLIA E L G++ V+PREVV+RAL +A+AVI Sbjct: 140 DYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVI 199 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSGD TPS AD +T+++V A + + I V DH+IVG ++ SF GL+ Sbjct: 200 LVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 6/146 (4%) Query: 18 QRTVKRALTLLD-RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 + + A +LD R R G AF A + +L L++A E+E F ++L+ QN+LI+ E Sbjct: 63 DKIISIAKHILDGRFFR--GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFE 120 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G+I V+PRE+VKRAL NAAAVILAHNHPSG + PS AD +T+ + +L L+ Sbjct: 121 KLFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALI 180 Query: 137 DIRVPDHLIVG--GRQIYSFAEHGLL 160 D+RV DH++VG G + SF E G + Sbjct: 181 DVRVLDHIVVGSDGSSV-SFIERGYM 205 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/165 (43%), Positives = 102/165 (61%), Gaps = 7/165 (4%) Query: 2 MEQSLIPQTPVLPLTAQRT-----VKRALTLLD-RHLRETGVAFTSTQAARDWLKLKMAG 55 M +L P+ P+ AQR + AL LLD RH + V T AA +LKL++A Sbjct: 1 MNTALNLVDPLDPVLAQRAREDALITGALQLLDQRHFQRGEVLITPADAAA-YLKLQLAP 59 Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 E F +L L+ ++++++ + LF GSI V+PR+VV +AL NAAAVI +HNHPSG Sbjct: 60 YHHEVFALLCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGC 119 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + PS AD+ +T RL +AL LV++RV DH+IVG S AE+G + Sbjct: 120 SEPSGADRVLTTRLTEALALVEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 93/144 (64%), Gaps = 7/144 (4%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 A R V RA L R L TS D+L+ MAGL REEF +L+L+++NQL++ E Sbjct: 87 AARRVTRA-DLAQRQL------LTSFSQVADYLRALMAGLPREEFWVLFLDRRNQLLSAE 139 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 L GS+ V+PREV++RAL N +A+ILAHNHPSGD PSQ D +T+ L++A + + Sbjct: 140 RLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIEMTKTLIEAGKAL 199 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 I++ DH+IV G + SF +GL+ Sbjct: 200 QIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 92/140 (65%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 + A+ +L+R L + G A TS Q A D+L+L M +RE F +++L+ +++IA E LF Sbjct: 26 IHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRVIAVEPLFY 85 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G I + R ++ RA+ N+ A+I+AHNHPSG+T PS AD+ +T L L+LVD+R+ Sbjct: 86 GGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAALLRLVDMRL 145 Query: 141 PDHLIVGGRQIYSFAEHGLL 160 DH I+G + +SFA+ GLL Sbjct: 146 LDHFIIGRGEPFSFAQAGLL 165 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAAR---DWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 +K L + +L+E+ + + + ++ D+L L M L+ E F +++L+ NQ I E Sbjct: 169 IKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDSANQTIDDEN 228 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF G+++++ V+PRE+VK A+ NAA++I HNHPSGD TPS +D+ IT+ L+ A LV Sbjct: 229 LFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITEDLIYACNLVQ 288 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 I V DH+I+G +SFA+ GLL Sbjct: 289 ITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 61/137 (44%), Positives = 90/137 (65%), Gaps = 6/137 (4%) Query: 30 RHLRETGVAF-----TSTQAARDWL-KLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 R +RE+ + F T A D+ K+ + EEF LYL+ +N++I E + G++ Sbjct: 29 RLVRESSITFIHPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTL 88 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +++ VHPREV K A NA +++LAHNHPSG+T PS ADK +T RLV+A +L+D++V DH Sbjct: 89 NASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDH 148 Query: 144 LIVGGRQIYSFAEHGLL 160 +IVG + YSF E GL+ Sbjct: 149 IIVGDKGYYSFRESGLI 165 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 76/111 (68%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +LK + +ERE F +LY N +N LI E +F G+I + V+ RE+VK L +NA ++I+ Sbjct: 99 YLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSIII 158 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 HNHPSG+ PS D+ +T++++ L+L+D+R+ DH+I+ + YSF E+G Sbjct: 159 VHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLENG 209 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/143 (47%), Positives = 86/143 (60%), Gaps = 8/143 (5%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 A + R T LD + S + ++LK + A LE E F M+ L+ Q+++I Sbjct: 28 AHSIIARRFTRLD--------SLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAV 79 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 L G+I S V+PREVVK AL NAAAVILAHNHPSG PS+AD+ IT+RL AL LV Sbjct: 80 DLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLV 139 Query: 137 DIRVPDHLIVGGRQIYSFAEHGL 159 DIRV DH++V G SFA G Sbjct: 140 DIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F + A + +L+L +A E F +L+L+ QN+L+A E LF G+++ T V+PREVV RAL Sbjct: 113 FATPDAVKHYLQLHLAAKPHEVFAVLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRAL 172 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + A++V+LAHNHPSG PS+AD+ +TQ L L L+D+RV DH+IV + S AE G Sbjct: 173 HHQASSVVLAHNHPSGTVQPSRADEMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERG 232 Query: 159 LL 160 LL Sbjct: 233 LL 234 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 83/123 (67%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A +S Q +WL ++ ++E F++++LNQ+NQ++A++TLF G+++S VHPRE+ K A Sbjct: 102 AISSPQKLSEWLMQQIGFQQQEHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEA 161 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 + A +I AHNHPSG+ S AD ITQ++++ QLV I + DH++VGG + S E Sbjct: 162 MRIGCAKIICAHNHPSGNPQVSDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREE 221 Query: 158 GLL 160 G + Sbjct: 222 GYM 224 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 77/113 (68%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 WL ++ G ++E F+ +YL+ +N ++ H LF G++ ++ VHPREV K AL +A V++ Sbjct: 115 WLGREIGGKQQEHFLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLV 174 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 HNHPS D TPS AD+ ITQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 175 VHNHPSQDLTPSLADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%) Query: 27 LLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 LL R LRE S Q RDWL+L AGL+ E F+++YL+ ++LI E LF G++ Sbjct: 57 LLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEELFRGTL 116 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 + T V+PREVVK AL NAAA+ LAHNHPSG+ PS+AD+ +TQ L AL LVD+R+ DH Sbjct: 117 TQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVDVRIIDH 176 Query: 144 LIVGGRQIYSFAEHGLL 160 IV G ++ SFAE GL+ Sbjct: 177 FIVAGDKVVSFAELGLI 193 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/129 (48%), Positives = 83/129 (64%) Query: 32 LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPR 91 L + GV S RD+L++ +A + E F LYL+ ++++I LF G+I V+PR Sbjct: 43 LHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIETVELFQGTIDGASVYPR 102 Query: 92 EVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 VV++AL NAAAV+ HNHPSG PS AD+ IT+RL +AL LVDIRV DH +V + Sbjct: 103 VVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALALVDIRVLDHFVVTAGES 162 Query: 152 YSFAEHGLL 160 SFAE GLL Sbjct: 163 ISFAERGLL 171 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 75/114 (65%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 +W K + + +E F+ LYL+ +++LI+H LF G+++ + VHPREV K A NA +V+ Sbjct: 110 EWFKFEYGTMSQECFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVL 169 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AHNHPSGD TPS+AD +T ++V + + + DH+IV Q YSF EH L Sbjct: 170 IAHNHPSGDCTPSKADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 92/148 (62%), Gaps = 5/148 (3%) Query: 15 LTAQRTVKRALTLLDRHL--RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 + ++ V A T+L L RE A T+ +L++ +A + E F ++LN ++++ Sbjct: 20 VKSEEIVSTAATILLNELTGRE---ALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKV 76 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 ++ E LF+G+I V+PR VV++AL NAAAVI AHNHPSG PSQAD+TIT RL A Sbjct: 77 LSFEPLFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDA 136 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L L+D+RV DH +V + S AE G L Sbjct: 137 LALIDVRVLDHFVVSRSEWVSLAERGWL 164 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A ++++ +R T A TS A + ++ ERE F +L L+ Q++LI GSI Sbjct: 30 AASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKFVEHSVGSI 88 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 SS V+PREV+K L++NAAAVI AHNHPSG PS AD+ IT RL AL+L+D++V DH Sbjct: 89 SSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELIDVKVLDH 148 Query: 144 LIVGGRQIYSFAEHGLL 160 ++G + SFA+ G + Sbjct: 149 FVIGVGETVSFAKRGWI 165 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 + ++TQ +LK ++ + E F L+L+ Q+++IA+E LF+G+I++ V+PR +V+R Sbjct: 101 IRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER 160 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS-FA 155 L NAAA+ILAHNHPSG + SQ D IT+R+ AL LVD R+ DH+++G ++YS FA Sbjct: 161 VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFA 220 Query: 156 EH 157 E+ Sbjct: 221 EN 222 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 6/154 (3%) Query: 13 LPLTAQRTVKRALTLLDRHLR------ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 +P + KR +++ H R E + S ++ + ++ +E F + L Sbjct: 59 IPGVGPQKYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALL 118 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 N Q++ + ++ LF+G+I++ V+PRE+VK AL +NAA VILAHNHPSG PSQAD IT Sbjct: 119 NNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAIT 178 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QR+ QAL L+D++V DH++VG S A+ G L Sbjct: 179 QRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 83/122 (68%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 FT A+ + + + ERE F++L+L++ ++LI E +F GS+S T V RE++++AL Sbjct: 35 FTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRLIKSEVMFQGSVSETSVSIREIIRQAL 94 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 NA+A+I+ HNHP+G+ PS ADK IT+RL +A +L+DI++ DH IV G + F ++ Sbjct: 95 KLNASAIIIGHNHPTGNVEPSDADKYITKRLKEACELMDIKLLDHFIVSGSASFCFTDNH 154 Query: 159 LL 160 L+ Sbjct: 155 LI 156 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 80/114 (70%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 ++LK+ ++ EEF +L+LN N+LIA +TLF G+I + V+PR V++ L +N+A VI Sbjct: 41 EFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVI 100 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LAHNHPSG+ PS+ D +T+ L + L+ +++ V DH+I+G + +SF E GL+ Sbjct: 101 LAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 75/103 (72%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 RE F+ ++L+ +N+++A E LF GS+SS+ V+PREV+ +AL AAA+I AHNHPSG+T+ Sbjct: 165 REVFVGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETS 224 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D IT+RL AL I V +HLI GG + YSFA+ G++ Sbjct: 225 PSPEDLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 75/120 (62%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 S R +L+ ++ RE F LYL+ +N+LI E LFAG+I V PREVV+ AL Sbjct: 102 IASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGAL 161 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +AA+VI+AHNHPSG PS+ D+ +T+RL AL LVDIR+ DH IVG S A G Sbjct: 162 LHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 TS A D+ MA E E+F +LYL+++N LIA E G++ V+PRE+++RAL Sbjct: 142 LTSWDALLDYCHTAMAHGEIEQFRVLYLDRKNVLIADEEQARGTVDHVPVYPREIMRRAL 201 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +A+A+IL HNHPSGD TPSQAD +T R+V A +++ I V DHLI+G + SF G Sbjct: 202 ELSASALILVHNHPSGDPTPSQADIGMTNRIVAAAEVMGIAVHDHLIIGRSRELSFRSEG 261 Query: 159 LL 160 LL Sbjct: 262 LL 263 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 8/156 (5%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMML 64 P+TP A + A+ +L R E A S R +L+ G E F++L Sbjct: 46 PRTP-----AWDALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVL 100 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 YL+ QN+LI E F G+++ T V+PRE+++R+L +AA VI +H HPSG PS AD+ Sbjct: 101 YLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEV 160 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T L AL LVD+RV DH++V G + SFAE G L Sbjct: 161 LTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 3/154 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 I + + LT R V R L + E V T+ Q D+L M GL++E F ++YL Sbjct: 92 IGEVNSMALTLIREVSR--RYLKDGIMEKPVCNTAQQVF-DYLYCAMRGLKKEVFKVIYL 148 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + Q++++ LF G+++S + PREV+ A+ NA+A+I HNHPSG PSQADK +T Sbjct: 149 DSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVT 208 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + LV A ++ IR DH+I+G +SFA G++ Sbjct: 209 RELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%) Query: 21 VKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 +K L + RH + G A T + L+ + RE F ++ L+QQNQ I Sbjct: 82 LKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQNQFIQFVP 141 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF G+I+ VH REV+K L +AAAVILAHNHPSGD TPSQ+D+ +T ++ Q LQL++ Sbjct: 142 LFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQIQQGLQLIE 201 Query: 138 IRVPDHLIVG--GRQIYSFAEHGLL 160 R DH+I+G GR YSF + G+L Sbjct: 202 TRCLDHIILGDHGR-WYSFTQQGIL 225 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 77/114 (67%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+ K + GL+ E F +LYL+ QN++IA ET+ G ++ V+PR+V++RAL ++A+I Sbjct: 193 DFCKTALGGLKDENFCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALI 252 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSG PS AD +T+ + +L+DI V DHLI+G + +SF E G++ Sbjct: 253 LVHNHPSGFVKPSDADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 74/108 (68%) Query: 53 MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + GL++E FM+L LN +N++++ E + G+++S VHPREV K A+ AA++I HNHP Sbjct: 55 LVGLDKEHFMILILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHP 114 Query: 113 SGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SGD PS DK +T+RL+QA +++ I V DH+++G S E G++ Sbjct: 115 SGDPAPSSEDKKLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 77/123 (62%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A + + + + K +A E + LYL+ Q LI L G+++ V+PREVV+ A Sbjct: 103 AMSEPGSVKRYFKTALANCAVEHCLALYLDSQLNLITSGELARGTLARASVYPREVVREA 162 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 L +AAA+ILAHNHPSG PSQAD+ T+ + QAL LV+IR+ DHLIV G + S AE Sbjct: 163 LRHHAAALILAHNHPSGSAQPSQADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAEL 222 Query: 158 GLL 160 GLL Sbjct: 223 GLL 225 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 50/121 (41%), Positives = 78/121 (64%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 + S + ++ +M L++E F+ LYLN +NQ+I +T+F GS++++ VHPREV K A Sbjct: 103 SIRSPEDCASYMMEEMRFLQQEHFVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEA 162 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 AA++I HNHPSGD PS+ D +T+RLV+ +++ I V DH+I+G + S E Sbjct: 163 FRRAAASIICLHNHPSGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEK 222 Query: 158 G 158 G Sbjct: 223 G 223 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 1/107 (0%) Query: 55 GLE-REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPS 113 G E RE+F +L+LN NQL+ E LF GSI + V+PRE++++ L + A +VI AHNHPS Sbjct: 121 GFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPS 180 Query: 114 GDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 G+T PS+ D +T+ + AL++ D+ + +H+IV +SF E GLL Sbjct: 181 GNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 2/129 (1%) Query: 33 RETGVAFTSTQAARDWL-KLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPR 91 R G S+ A D L + ++A L+RE F+++ LN +N++I T+ G++SS+ VHPR Sbjct: 100 RNPGRPVISSPADVDGLLRGRIANLDREHFVVVLLNTKNEVIEAPTISVGTLSSSLVHPR 159 Query: 92 EVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 EV K A+ +AA+V+LAHNHPSG PS+ D+ +T R+ +A ++ I V DH+IV G Sbjct: 160 EVFKPAIRASAASVVLAHNHPSGRVEPSREDREVTGRVAEAGGIIGIEVLDHVIV-GEGY 218 Query: 152 YSFAEHGLL 160 +S EHG+L Sbjct: 219 FSMKEHGML 227 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 5/158 (3%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLK--LKMAGL-EREEFMML 64 P+T P +V R + D+ ++ + + + A+ +K ++M G +RE+F +L Sbjct: 22 PKTNTKPSKKFISVYRVSLVRDKGIKFGRESLSGPKQAQKIMKSLIEMQGQPDREQFCIL 81 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 LN +N++I + GS+SS VHPREV+K A+ N++A+IL HNHPSG TPS D Sbjct: 82 MLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDIA 141 Query: 125 ITQRLVQALQLVDIRVPDHLIVG--GRQIYSFAEHGLL 160 IT+R++QA ++ I V +HLI+ YSF+E+GL+ Sbjct: 142 ITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 82/125 (65%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G ++ A+ +L+L++AGLE E ++ L+ Q +LI + F G++S V+PRE++K Sbjct: 50 GEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQLRLITYLEPFRGTLSQAPVYPREILK 109 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 AL NAA +++AHNHPSG SQAD+ +TQ + QAL L+D+R+ DH IV G + S A Sbjct: 110 LALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQQALALIDVRLLDHFIVAGTTVVSMA 169 Query: 156 EHGLL 160 + G L Sbjct: 170 QRGQL 174 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 75/109 (68%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 +S A D+ + MA +RE+F +L+L+++NQLIA E G++ T V+PRE+VKRAL Sbjct: 129 LSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRAL 188 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 +A AVI+ HNHPSGD TPSQAD +T+ +V + + + V DH+IVG Sbjct: 189 ELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEPLGVAVHDHIIVG 237 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 49/114 (42%), Positives = 75/114 (65%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+LK+K+ E F++LYLN++ LIA E G++ T ++ REV+++AL A ++ Sbjct: 119 DYLKVKIGNSTIENFLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIV 178 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++HNHPSGD PS+AD +T +L A +DI + DH+IV ++ YSF HGLL Sbjct: 179 ISHNHPSGDPKPSKADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 79/128 (61%) Query: 33 RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 +E T D L M+ L+ E F ++ LN +N +I E + G+I+++ VH RE Sbjct: 97 KEKQKIITCVMDIVDLLSYDMSFLDEEHFKVILLNTKNMVIETELISIGTINTSLVHVRE 156 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 V + A+ NA ++ILAHNHPSGD+TPS D+ +T+RL A +L+ I+V DH+I+G + Sbjct: 157 VFRNAIKKNANSIILAHNHPSGDSTPSIEDEHLTKRLKDAGELIGIKVIDHVIIGKDNYF 216 Query: 153 SFAEHGLL 160 SF E +L Sbjct: 217 SFMEENML 224 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 83/124 (66%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 ++ +S+ AA LK + GL EEF +LYL+ N LI L G ++T V R V+++ Sbjct: 108 LSLSSSGAAFSILKPVLIGLTYEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQ 167 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 A+ + A A+I+AHNHP+G+ PS +DK +TQ+L +A +++DI++ DH+IVG + +SFA+ Sbjct: 168 AIRWGATAMIVAHNHPTGNLKPSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFAD 227 Query: 157 HGLL 160 LL Sbjct: 228 QNLL 231 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 2/123 (1%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 AFTS + + L + +E FM L+L+ +N+L+ + + GS+S++ VHPREV K A Sbjct: 46 AFTSPRKVAEMLAF-LKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSA 104 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 L +AA ++L HNHPSG T PS D+ +T RLV+A +++ I V DH+I+G +SFAE Sbjct: 105 LLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILGD-GFFSFAEQ 163 Query: 158 GLL 160 GLL Sbjct: 164 GLL 166 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 73/106 (68%) Query: 49 LKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILA 108 L+ KM+ L +E F+++ L+ N+LIA +TLF GS++ + V RE+ + AL FN ++I Sbjct: 111 LETKMSHLSQEHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICV 170 Query: 109 HNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 HNHPSGD PS D ++TQ+LV +++++ + DH+I+G Q YSF Sbjct: 171 HNHPSGDAHPSSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSF 216 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 74/114 (64%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+LK+ M + E+F +L+LN++N LIA E L G+I V+PRE++KRAL+ A+ +I Sbjct: 136 DYLKVNMGNMRLEQFRVLFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNII 195 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSG PS+A +T +V + ++I V DH+I+ + +SF + LL Sbjct: 196 LVHNHPSGSPDPSKAGIDMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 75/105 (71%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L++E F L LN +N +I ET+ G+++S+ VHPRE+ K+A+ +AAAVIL HNHPSGD Sbjct: 127 LDKEYFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGD 186 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TPS+ D ++T+RL++A +++ I V DH+++G + S GL+ Sbjct: 187 PTPSREDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 85/140 (60%), Gaps = 5/140 (3%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 V+RA+ +L+R + G S + R +L+L++ G E F ++L+ Q LF Sbjct: 68 VQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WRALFR 122 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G++++ ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L AL LVDI + Sbjct: 123 GTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLVDIEL 182 Query: 141 PDHLIVGGRQIYSFAEHGLL 160 DH ++G + +SF + LL Sbjct: 183 LDHFVIGRGEPFSFFDAQLL 202 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 79/113 (69%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 DWLK ++ +E+F++++L ++++++ LF G+I+++ V PRE+ K AL N+ +I Sbjct: 110 DWLKQEIGTSLQEKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNII 169 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 L HNHPSG+ +PSQ D ++T+R+ +A QL+ ++V DH+IV +SF + G+ Sbjct: 170 LVHNHPSGNLSPSQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 79/124 (63%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 + F S+ +L + G+E+E+ +++YL+ +N+++ LF G+++ + VHPR++ + Sbjct: 84 IQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRW 143 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 A+++N+ +++AHNHPSGD PSQ D T+++ +A L+ I DH+IV R SF E Sbjct: 144 AVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHIIVADRSYLSFKE 203 Query: 157 HGLL 160 L+ Sbjct: 204 EQLI 207 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 27 LLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISST 86 +LD+ + + TS++ D + +++ L++E F + L+ +N +IA E + G + ST Sbjct: 99 VLDKKIEK----ITSSKDVYDIMSPRLSNLKKEYFYAILLDSKNVIIAKEVISIGDLGST 154 Query: 87 EVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 V+PREV K A+ +A ++IL HNHPSG+ PS D IT RL +A ++DI+V DH+++ Sbjct: 155 VVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLITDRLAEAGDILDIKVLDHIVI 214 Query: 147 GGRQIYSFAEHGLL 160 G YSF + G L Sbjct: 215 GNSSYYSFKKEGNL 228 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 1/129 (0%) Query: 32 LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPR 91 LR +G+ STQ +L+ M +RE+ +L+LN +++L+A + + G++ T V+PR Sbjct: 122 LRRSGILADSTQL-YAYLRAVMGPEKREQVRVLFLNDKHELLADDVMGQGTVDHTPVYPR 180 Query: 92 EVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 E+V RAL NA ++L HNHPSGD TPS D +T ++ A ++++I V DH+IV G ++ Sbjct: 181 EIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQICGAAKIMNIHVWDHIIVAGEKL 240 Query: 152 YSFAEHGLL 160 S E G L Sbjct: 241 LSMREAGFL 249 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 83/133 (62%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 L + + ++ TS ++LK + + E F +L+LN QN+L+ E LF G+I + Sbjct: 108 LYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRST 167 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 ++ RE++K+ L +NA +VIL HNHP+G PS +D +T+++ + + ++IR+ DHLI+ Sbjct: 168 IYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLIIS 227 Query: 148 GRQIYSFAEHGLL 160 + +SF E G+L Sbjct: 228 EQGYFSFLEGGIL 240 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 79/120 (65%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 S A + L +M ++E F+ LYLN +N++I+ +TLF G ++++ VHPR++ + A+ Sbjct: 98 SPDDAAELLMEEMRLYQQEHFICLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRC 157 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AA+ I HNHPSGD TPS+ D +++R+V+A +L+ I DHL++G Q S + G + Sbjct: 158 SAASFIAVHNHPSGDPTPSREDIEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 77/116 (66%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 A + + + K++G+ E +LYLN Q ++I + + G+++ V+PRE+VK AL +A Sbjct: 60 NAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDA 119 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 AA+I++HNHPSG PS+AD +T+ L AL LVD+R+ DH+IV G+ S AE G Sbjct: 120 AAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 76/118 (64%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 V + A +LK K+A ++E F+ L+L+ +L+ E LF G++ V+PRE+ +R Sbjct: 98 VIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVDRLAVYPREIAER 157 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 A+ A VI+AHNHPSG+ +PS+ D T+T +L++AL +DI + DH+I+ + YSF Sbjct: 158 AITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHIIITTKGFYSF 215 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 78/116 (67%) Query: 45 ARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAA 104 A +++ +M ++RE F L LN +N++I+ E + G+++S+ VHPRE+ K A+ +AAA Sbjct: 112 AVNYVMEEMRYMDREHFKALLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAA 171 Query: 105 VILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +IL HNHPSGD TPS+ D +T+RL +A ++V I V DH+++G + S GL Sbjct: 172 IILIHNHPSGDPTPSREDIDVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 80/130 (61%) Query: 31 HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHP 90 H +ET + S A + L ++ + +E F++L LN +N ++ T+F GS++++ VHP Sbjct: 94 HTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTKNIVMHESTIFIGSLNASIVHP 153 Query: 91 REVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQ 150 REV K A+ +AAA+I+ HNHPSGD PS D T+RL++ ++ I V DH+I+G Sbjct: 154 REVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRLIKCGEIFGIDVLDHIIIGDGY 213 Query: 151 IYSFAEHGLL 160 S E G+L Sbjct: 214 YVSIKEKGIL 223 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 3/132 (2%) Query: 21 VKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 +K A TL R L+ G + +A D L+ + E E F ++ LN + +LI E Sbjct: 95 LKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLNTRRKLIRVEN 154 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 + G++ + +HPREV K A+ NA+A++LAHNHPSGD TPS+AD +T+ L++A QL+ Sbjct: 155 ITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTRDLIRAGQLLK 214 Query: 138 IRVPDHLIVGGR 149 I + DH+I+G R Sbjct: 215 IEILDHIILGRR 226 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/114 (42%), Positives = 75/114 (65%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+L ++A E+F +L+LN++N LIA E G+++ T V+PREV +RA+ A A++ Sbjct: 103 DYLTARLARENIEQFRILFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALV 162 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSGD TPS+AD +T ++ AL++V + + DH I+G + SF LL Sbjct: 163 LVHNHPSGDPTPSEADLQMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 TP + L Q + L+ L+ + V +S QA +L++ +A RE+F +L+L+++ Sbjct: 95 TPDIALDLQLMFEATRRLMAEPLKRSTV-ISSWQALLSYLRVTLAHEPREQFRLLFLDKK 153 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 NQLIA E + G++ +PRE+++RAL +A++VIL HNHPSGD PSQ D +T+ Sbjct: 154 NQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKAN 213 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + A + + I + DHLIVG + S + G Sbjct: 214 IAAGKPLKIAIHDHLIVGREGVLSMKQVG 242 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 6/159 (3%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 E+ P+T + L + V + +T+ D +L+ +++Q + L+ +E Sbjct: 10 EEVQAPKTRTIKLKTIKAVYQTITVNDTITDYLKPNTRYTSASQVFDTFTFLRHE--TKE 67 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ L+L+ +N+++ + + GS++ + VHPRE+ K AL +AAAVIL HNHP+GD TPS Sbjct: 68 HFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPTPS 127 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 D TIT+RL +A +L+ IRV DH+I+G YSF E G Sbjct: 128 TEDLTITRRLQEAGELIGIRVLDHIIIGD-NYYSFTERG 165 >UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii CbuG_Q212 RepID=B6J212_COXB2 Length = 158 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 46/79 (58%), Positives = 60/79 (75%) Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 S + VHPRE++KRALY N+AA+I+AHNHPSG PSQAD+ T L +AL L+D+R+ Sbjct: 80 SFNQASVHPREIIKRALYHNSAALIVAHNHPSGVLDPSQADRAATTHLKEALALIDVRLL 139 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH+I+G R +SFAE GLL Sbjct: 140 DHIIIGDRNSFSFAESGLL 158 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 83/134 (61%), Gaps = 5/134 (3%) Query: 32 LRETGVAF-----TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISST 86 +RE+ V + S + A LK + +RE+F+++ L+ +NQ A GS++S+ Sbjct: 36 VRESSVLYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDTKNQPTAINICHIGSLNSS 95 Query: 87 EVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 VHPREV K A+ N+A++I+AHNHPS D TPS+ D +T+RLV+A ++V I + DHLIV Sbjct: 96 IVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVEAGRIVGIELLDHLIV 155 Query: 147 GGRQIYSFAEHGLL 160 + S E G + Sbjct: 156 CEEKFVSLKEKGYI 169 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 83/124 (66%), Gaps = 1/124 (0%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 A +S++ + L + + E F ++YL+ QN+++ ET F GS++++ V+ RE++ +A Sbjct: 127 AVSSSEELYNLLNFQFENKKNECFFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDKA 186 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR-QIYSFAE 156 L A+AV+LAHNHPSG+T PS+ D +T L A + V+I + +HLI+G + + YSFA+ Sbjct: 187 LKTGASAVLLAHNHPSGNTKPSKNDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFAD 246 Query: 157 HGLL 160 HG L Sbjct: 247 HGYL 250 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 89/142 (62%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 R VK L +++ + + ++ A +++ +M L++E F+ L+L+ ++++I ET+ Sbjct: 63 RAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKETI 122 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F GS++S+ PRE+++ AL ++AA +I HNH SGD+ PS D +T+RL +A L+ + Sbjct: 123 FIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLMGV 182 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 + DH+++G + S E+ LL Sbjct: 183 ELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 87/145 (60%), Gaps = 3/145 (2%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARD---WLKLKMAGLEREEFMMLYLNQQNQLIAH 75 + +K ++L+ +L + A T RD +L +K+ L+ E F ++ L+ + I+ Sbjct: 74 KLIKSIPSILEYYLLSSLKADTPNFKKRDLINYLIIKLGKLKFETFSIVCLDVNKKFISM 133 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 E +F G+I S ++PR++V+++L ++ VI++HNHPSG PS+ D IT L +A ++ Sbjct: 134 EHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDINITNVLYKAFKM 193 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 VDI++ DH+I+ YSF E G+ Sbjct: 194 VDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 72/102 (70%), Gaps = 1/102 (0%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E LYL+ +N+++A E +F GS+SST V+PRE++KR + ++AV++ HNHP+GD P Sbjct: 50 ETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGP 109 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D IT RL+ AL+ +++ + DH+IV G YSFA+ G++ Sbjct: 110 SVEDTRITIRLLVALKSMNVDLHDHIIV-GEGYYSFADAGVI 150 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 76/113 (67%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +L +A + E+F +L+L+ +NQLIA E L G+++ V+PREVVKRAL +A A+I+ Sbjct: 159 YLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIV 218 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 HNHPSGD TPS D +T+ L +A +L+ + + DH+I+G SF + GLL Sbjct: 219 VHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 80/119 (67%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 ++ L + S + A +++K ++ +RE F + LN +N++I+ E + G +SS+ V Sbjct: 95 EKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILLNNKNEVISKELISIGDLSSSIV 154 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 +PREV K A+ +A ++ILAHNHPSG+ +PS+AD IT RL+ A +++DI V DHLI+G Sbjct: 155 NPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLITHRLIDAGEILDITVLDHLIIG 213 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 70/103 (67%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F+ L+L+ +N+++ + + GS++ + VHPREV K AL NAAA+I H HPSGD Sbjct: 66 KEHFITLHLDGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPN 125 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D +IT+RL +A +++ IRV DH++VG SF E GL+ Sbjct: 126 PSSEDLSITKRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 72/121 (59%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 S++ + + + + L EEF +LYLNQ N+L+ L G I+ T V R KRA Sbjct: 112 NSSKIVYESIYMDLDTLPHEEFWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFE 171 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 A +ILAHNHPSG TPS +D+ IT++ A VD+R+ DHLIV + +SFA+ GL Sbjct: 172 VGATGLILAHNHPSGGLTPSSSDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGL 231 Query: 160 L 160 L Sbjct: 232 L 232 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 83/150 (55%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P P T++ A+ L R + + ++L K+ G ++E+F +LY +QQ Sbjct: 55 PDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQ 114 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 L+ + LF G++ + VHPRE+ + A+ + A++I+AHNHPSG TPS D +T+ L Sbjct: 115 NLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLK 174 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +++ I DH I+GG + S E L Sbjct: 175 KASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/118 (42%), Positives = 76/118 (64%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 +A R+ +M +RE F +LYL+++ LI + + G + S+ VHPREV K A+ +A Sbjct: 118 EAVRELAMEEMRHYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSA 177 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 A++IL HNHPSGD TPSQ D IT+RL++A +++ I + DH+I+G S GL+ Sbjct: 178 ASMILVHNHPSGDPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 68/102 (66%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +++ +N++IA E + G++ +T V PRE++ AL AAA+ILAHNHP GD TP Sbjct: 126 EEFWAAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTP 185 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T+R+ Q + IR+ DH+IV + YSF EHG L Sbjct: 186 SREDLDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 71/102 (69%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E+F +L+L+ +NQLIA E G+I+ V+PRE+ KRAL +A+A+IL HNHPSGD TP Sbjct: 171 EQFRVLFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTP 230 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+AD +T+ ++ A + ++I + DHLIVG + I S L+ Sbjct: 231 SRADIDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 5/116 (4%) Query: 45 ARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAA 104 ARD+ A LE+E+ +L L+ +NQ+I + +F G+++S PRE++K AL A Sbjct: 95 ARDF-----ANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTPTAR 149 Query: 105 VILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 V++AHNHPSGD TPS+ D T+RL A +L+ + + D I+G +SFAE G+L Sbjct: 150 VVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/108 (45%), Positives = 70/108 (64%) Query: 53 MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + G +RE F++L L+ +NQ GS++S+ VHPREV+K A+ NAA++I+AHNHP Sbjct: 61 LDGADREYFIVLCLDIKNQPTTINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHP 120 Query: 113 SGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D TPS D +T+RL++A ++V I V DHLIV S E G + Sbjct: 121 SNDPTPSSEDLEVTKRLIEAGKVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 2/149 (1%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P P T+ A +L RH R T V S D+L L E F +L L+ Sbjct: 12 PPAPGFSEAEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLD 70 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 ++N+LI + + GSI V+ EV++ AL +A+A+IL HNHPSGD PSQAD +T+ Sbjct: 71 RKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTR 130 Query: 128 RLVQALQLVDIRVPDHLIVG-GRQIYSFA 155 ++V A +++DI + DHLIVG GR+ +F+ Sbjct: 131 KIVDACRVMDITLHDHLIVGFGREQAAFS 159 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 5/141 (3%) Query: 24 ALTLLDRHLRETGV----AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 ALTL +R L + + TS + A ++ M LE E F ++ LN + ++ + Sbjct: 96 ALTLAER-LNSSSIYDKKKITSPEDAAKYVMASMRDLETEVFRIIILNTKKEIKYIREIS 154 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G I+ T VHPREV ++A+ A ++IL HNHP+GD +PSQ D+ +T+RLV+ ++V I Sbjct: 155 HGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDRNLTRRLVEVSKIVGID 214 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 + DH+I+G +SF + G+L Sbjct: 215 ICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 78/114 (68%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 + A + +K + ++R+ F+++ L+ +NQ A GS++++ VHPREV+K A+ N+ Sbjct: 2 EDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSNS 61 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 A+VI+AHNHPS D TPS+ D +T+RL++A +++ I + DH++VGG + S E Sbjct: 62 ASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKE 115 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 74/120 (61%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 + +AA +++K G + E F ++ L+ Q +I LF G++ V+PR+VV+ + + Sbjct: 108 NVEAAAEYIKSLFVGRKNEVFYVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRY 167 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 NA++VILAHNHP G PS D TQ++V AL + + V DH IV + YSFA++G+L Sbjct: 168 NASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/115 (44%), Positives = 73/115 (63%) Query: 46 RDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAV 105 RD+L MAG E F +L L+ Q +L+ + G+I VHPR+VV+ + AA V Sbjct: 121 RDYLVPLMAGRTEEVFYVLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHV 180 Query: 106 ILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ILAHNHPSG+ SQ D +T L+QAL +D++V DHLI+ G +++SFA G++ Sbjct: 181 ILAHNHPSGNPKASQDDILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/113 (43%), Positives = 70/113 (61%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 + + +A ++RE F L+L+ + + LFAGS++ VH REV++ L NAAAVI Sbjct: 112 YCQCHLAHVDREVFGALWLDNGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIF 171 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 HNHPSGD +PSQAD+ +T L L ++IRV DH++V + SFAE G Sbjct: 172 YHNHPSGDPSPSQADRQLTNHLKDVLGQIEIRVLDHMVVSLSGVVSFAERGWC 224 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 78/125 (62%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G++F + D+ ++ E+E + + L+ +N L+ E +F G+++S+ +PRE+ Sbjct: 107 GLSFRHPASIADYYMEQLRHEEQELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFL 166 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 A+ ++A ++L HNHPSGD TPSQAD TQR+ +A +L+ I + DH+I+G + SF Sbjct: 167 SAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFR 226 Query: 156 EHGLL 160 E G+ Sbjct: 227 EQGIF 231 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 7/144 (4%) Query: 24 ALTLLDRHLRETGVA--FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A L R RET S + D L +M L RE ++ L+ + LI E + G Sbjct: 88 AFGLASRLARETLARQRLDSPELINDLLGPEMRALGRESLRLVLLDTKYLLIRVEEISHG 147 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 S++ + HPREV + AL ++A AVIL HNHPSGD TPS AD +T+RLVQ +L+ IR+ Sbjct: 148 SLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADHQLTRRLVQGAELLQIRLL 207 Query: 142 DHLIVG----GRQIY-SFAEHGLL 160 DH+I+G GR Y SF E G++ Sbjct: 208 DHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 78/120 (65%), Gaps = 3/120 (2%) Query: 44 AARD---WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 +ARD ++ ++ + +E +L+LN +NQ+I +E + G+++++ HPREV K A+ Sbjct: 103 SARDVFEYMAGRVPDITKEHLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRE 162 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A A+IL HNHPSGD PS AD+ +T+ L QA + I + DH+I+G +SF EH LL Sbjct: 163 SAHAIILVHNHPSGDVEPSNADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 78/129 (60%), Gaps = 1/129 (0%) Query: 32 LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPR 91 L+ +G+ Q +L+ M +RE+ +L+LN Q+QL+A + + G++ T V+PR Sbjct: 20 LQHSGI-LAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLADDIMGQGTVDHTPVYPR 78 Query: 92 EVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 E+V RAL A ++L HNHPSGD TPS D +T ++ A ++++I V DH+IV G ++ Sbjct: 79 EIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAKIMNIHVWDHIIVAGEKL 138 Query: 152 YSFAEHGLL 160 E G L Sbjct: 139 LCMREAGFL 147 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 86/143 (60%), Gaps = 3/143 (2%) Query: 21 VKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 ++ A+ L R + + + F TS+Q L +M GL++E + +YLN +N +I +T Sbjct: 87 LRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDIIQQKT 146 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 +F GS++ + HPRE+ + A+ +++A ++LAHNHPSG+ TPS D T+R+ + +++ Sbjct: 147 IFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMG 206 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 I++ DH+I+G S E Sbjct: 207 IQLLDHIILGDSGYISLREENFF 229 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 77/114 (67%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+L++ + L +E F ++Y+N++ +LIA + G++ T ++ RE++KRAL + +++ Sbjct: 111 DYLRISIGSLNKENFRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIV 170 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++HNHPS DT PS +D ++T++L +A Q + I + DH+I+ +SF E+ LL Sbjct: 171 ISHNHPSRDTQPSNSDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 Q L L ++K A TL R ET FTS D+ ++ +E F+ L Sbjct: 76 QIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKELFLTLL 135 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ +N++ + GS++ + VHPREV A+ +AAAVI HNHPSGD PS+ D I Sbjct: 136 LDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHEI 195 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL +A +++ I+V DH+I+G +SF E GLL Sbjct: 196 TRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 80/122 (65%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F S + ++ K+ GL++E F+ L L+ + +LI + G+++ + +HPREV K A+ Sbjct: 103 FNSAEIVYNYFFPKLNGLKKEVFITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAV 162 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +A AVIL HNHPSGD TPS+ D IT++L +A ++++I + DH+I+G + +S E G Sbjct: 163 KESAYAVILIHNHPSGDPTPSEQDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222 Query: 159 LL 160 ++ Sbjct: 223 VV 224 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 49/103 (47%), Positives = 67/103 (65%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 RE F L+L+ Q QL+A +F G++++ V+PRE+V AL A+A+I+AHNHPSG Sbjct: 117 SREVFTCLFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCL 176 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 PS AD +T RL +AL L+DI + DHLIV + S A GL Sbjct: 177 APSVADIQLTDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 1/125 (0%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 GV +S + ++ +AG +E+ + +YL+ +NQ+I + L+ G+++S+ HPREV K Sbjct: 99 GVVASSQMVGQRMIE-SLAGETQEQLLAVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFK 157 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 A+ ++AA IL HNHPSG PS D T+R+V QL+ I DHLI+G Q S Sbjct: 158 WAVQYSAAKFILVHNHPSGQLAPSTQDINFTKRIVNCGQLMGITCLDHLIIGSSQYLSLR 217 Query: 156 EHGLL 160 E G L Sbjct: 218 EEGYL 222 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 75/109 (68%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 KM ++E+F+ L L+ +NQ++ E + GS++++ VHPREV K AL ++A+VI+ HNH Sbjct: 120 KMREQKKEKFITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNH 179 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PSGD +PS+ D +T+++V+ +L+ I V DH+I+G + S + G + Sbjct: 180 PSGDPSPSREDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 Q V A +L RHL + V TS QA D+ L + G + E F +LYL+++N+LI+ E Sbjct: 22 QAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLYLDRRNRLISDEC 79 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 L G++ V+PREV++R L NA+A+I+ HNHP+GD PS AD +T+ + A + Sbjct: 80 LAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEIRNASASLG 139 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 + + DH+I G + S G L Sbjct: 140 VILHDHIITGAGRETSLRARGEL 162 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 3/154 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKL---KMAGLEREEF 61 S + + P + +K A L +R + + + D +L ++ RE F Sbjct: 83 SELCEIPGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREHF 142 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + + LN ++ L+ + + GS+++T VHPREV RA+ +A VIL HNHPSGD PSQ Sbjct: 143 LAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQD 202 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 D +T RLV A L+ I + DH+I+G ++ YSF+ Sbjct: 203 DIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFS 236 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 3/142 (2%) Query: 20 TVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 T+K A L +R R + T D++ M L +E F++L LN +N +I Sbjct: 81 TLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKET 140 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 +F G+++S+ VHPRE+ A+ NA A+I HNHPSGD TPSQ D T RL + ++ Sbjct: 141 CVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLIL 200 Query: 137 DIRVPDHLIVGGRQIYSFAEHG 158 I + DH+I+G + S E G Sbjct: 201 GIDLLDHIIIGDNRFTSLVEAG 222 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 71/116 (61%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F+S + K MA RE+F +L+L++++ L++ E G+I T V+PREVV RAL Sbjct: 144 FSSWDKVLAYCKAVMAHETREQFRILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRAL 203 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 +A+ +IL HNHPSGD +PSQ D ++T RL +DI + DHLI+ SF Sbjct: 204 ELSASGIILVHNHPSGDASPSQEDISMTYRLKDVANALDITLHDHLIIARNDYISF 259 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 2/140 (1%) Query: 23 RALTLLDRHLRETGVAFTSTQAARDWLK-LKMAGLEREEFMM-LYLNQQNQLIAHETLFA 80 +A+ L + L E + Q+ D + K L EE+++ L+LN +N+++ H T+ Sbjct: 50 KAVFDLSKALLEPDDTSITIQSPADVFENFKYLALHEEEYLVALFLNTKNKILQHTTISK 109 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G+++++ +HPREV A+ A+V++ HNHPSGD TPS+ D IT+RL +A +++ I + Sbjct: 110 GTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDIDITKRLKEAGKIIGIEL 169 Query: 141 PDHLIVGGRQIYSFAEHGLL 160 DH+++G + S E LL Sbjct: 170 LDHIVIGNKGFVSLREKSLL 189 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 80/120 (66%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 S A D+L+L + RE F+ L+L+ +++L+ E GS++ V+PRE+V+RAL Sbjct: 159 SPGAVDDYLRLLIGTRPREVFVCLFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALAL 218 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 NAAA+I+AHNHPSG PS AD+ +T+ L AL LVDI++ DH +VG +SFA+ G + Sbjct: 219 NAAALIVAHNHPSGAVRPSAADRRLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 80/125 (64%), Gaps = 1/125 (0%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G F+S +++ K+ ++E + + L+ +NQ+++ + +F G+++S VHPRE+ K Sbjct: 100 GQIFSSCMFG-NYMIDKIGDSKQELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFK 158 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 AL F+ A +++AHNHPSG+ PS+ D +T+RL+ A +++ I + DH+IVG S A Sbjct: 159 HALNFSCARILVAHNHPSGNVEPSENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLA 218 Query: 156 EHGLL 160 E ++ Sbjct: 219 EEKIV 223 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 75/128 (58%) Query: 33 RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 RE +F S+ +L ++G +E M +Y++ +N++IA + +F G+++ +HPR+ Sbjct: 78 REKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAEKVIFKGTLNQAIIHPRD 137 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 + + A+ +NAA LAHNHPS D TPS+ D +T+++ + + IR DH IV Sbjct: 138 IFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSECMGIRFLDHFIVNTGNYL 197 Query: 153 SFAEHGLL 160 SF E LL Sbjct: 198 SFKEMELL 205 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 65/104 (62%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 E EEF M ++ +N+L+ E + G++ V+PREV+ AL +NA+ VIL HNHP D Sbjct: 125 EHEEFWMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADP 184 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D T+R+V A + +DIRV DHL+V + +SF G++ Sbjct: 185 KPSAEDMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 10/128 (7%) Query: 34 ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 E G S RD +RE F ++ LN +N ++A GS++S+ VHPREV Sbjct: 29 EDGAKIASRFIGRD---------DREVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREV 79 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY- 152 K A+ N A+VILAH HPSGD PS D +T+RLV+A +L+ I V DHLIV + Sbjct: 80 FKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFT 139 Query: 153 SFAEHGLL 160 S E G + Sbjct: 140 SLKERGYI 147 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 71/108 (65%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+ MA RE+F +L+L+++N LIA E G++ T V+PRE+V+RAL ++ A+I Sbjct: 167 DYCHAAMAHETREQFRILFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALI 226 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 L HNHPSGD TPS+AD +T+ ++ + + I V DH+I+G SF Sbjct: 227 LIHNHPSGDPTPSRADIEMTKTIIDTAKPLGITVHDHIIIGKDGHASF 274 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 +RE F ++ LN +N ++A GS++++ VHPREV K A+ NAA+VI+AH HPS D Sbjct: 13 DREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDI 72 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY-SFAEHGLL 160 TPS+ D +T+RLV+A +L+DI V DHL+V + S E G + Sbjct: 73 TPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 77/122 (63%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 S + L +M L++E F + LN ++++IA E + GS++++ VHPREV A+ Sbjct: 111 IKSPDDVSNLLMEEMRYLKKEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAI 170 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +++A+IL HNHPSGD +PS D IT+RLV+A +L+ I V DH+I+G YS E Sbjct: 171 KRSSSAIILVHNHPSGDPSPSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKS 230 Query: 159 LL 160 ++ Sbjct: 231 MM 232 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 15/133 (11%) Query: 43 QAARDWLKLK---------------MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 Q A D LKLK + L EEF +L+LN N++I+ L G I+ T Sbjct: 97 QRAEDILKLKKITSSKDAFTIMQPIIGELPHEEFWVLFLNNSNKVISKAQLSKGGIAGTI 156 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 V R V K L A +IL HNHPSG+ PSQADK IT+++ A +++D+++ DHLI+ Sbjct: 157 VDVRLVFKLGLENGATGLILCHNHPSGELNPSQADKQITKKIKTAGEILDVKILDHLIIT 216 Query: 148 GRQIYSFAEHGLL 160 + YSF + G+ Sbjct: 217 ETKYYSFVDEGIF 229 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 73/114 (64%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+++ M LE E+F L+LN+++ +IA E + G++ T V+PRE+++RAL A+A+I Sbjct: 115 DYIQATMGYLEIEQFRCLFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALI 174 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSGD TPS+ D +T +LV + + I + DH+IV SF LL Sbjct: 175 LVHNHPSGDPTPSRPDIEMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 77/125 (61%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G +TS QA ++ +RE F+ L L+ +N+L+ + GS++++ VHPR+V Sbjct: 103 GDRYTSPQAVFAHFHERLRDHKRERFIALLLDSKNRLLREVGISEGSLTASIVHPRDVFA 162 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 + +AAAV+ HNHPSGD +PS+ D ITQRL + +L+ +RV DH+I+G S A Sbjct: 163 PVVRESAAAVLFVHNHPSGDPSPSREDLDITQRLREVGELMGVRVLDHIIIGDEGYVSLA 222 Query: 156 EHGLL 160 + G+L Sbjct: 223 DRGVL 227 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 33 RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 +E ++S+Q ++ K+ G +EE +YL+ +N++IA + +F G+++ HPR+ Sbjct: 80 KEIESLYSSSQVGC-YIADKLCGRPQEELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRD 138 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 + + A+ +N+ A +AHNHPSGD PSQ D T++LV+A + + I DH IV Sbjct: 139 IFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYL 198 Query: 153 SFAEHGLL 160 SF E LL Sbjct: 199 SFREMELL 206 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 76/131 (58%) Query: 30 RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVH 89 R R+ + S D+ K + RE+F+++ LN +N++ T+F G+I+ + +H Sbjct: 20 RKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINMSPIH 79 Query: 90 PREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 PREV + A+ + A++ILAH HPS D TPS D+ T+R + +L+ I V DH+IV Sbjct: 80 PREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHIIVTES 139 Query: 150 QIYSFAEHGLL 160 +SF E+ L Sbjct: 140 SYFSFRENNLF 150 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 LD L+ TG +Q +D++ + G RE F +L L+ LI E LF G ISS Sbjct: 93 LDSQLK-TGQGLGRSQMVKDYISTHLRGEPREVFAVLCLDNALNLINFEILFTGGISSCS 151 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 V + V++ AL + +I+AHNHP D TPS AD +T L +A L+D+ + DH+IVG Sbjct: 152 VCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTYELKKACDLIDLSLIDHVIVG 211 Query: 148 GRQIYSFAEHGL 159 + S+AE+ L Sbjct: 212 RNETLSYAENCL 223 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 76/122 (62%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 ++ QA D+L + MA L E +LYLN QN LI + G++ + ++ REV+++A+ Sbjct: 124 LSNWQALLDYLHIDMAHLTVERVRVLYLNSQNMLILDHLVSEGTLDESPIYTREVIRKAM 183 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 AAA+IL HNHPSG PS+AD +TQ++++A +L+ + V DH+++G S G Sbjct: 184 DVGAAAMILVHNHPSGSPKPSRADIQVTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQG 243 Query: 159 LL 160 L+ Sbjct: 244 LI 245 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 70/109 (64%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 +M LERE ++ L+ + +I TL G+ + +HPR+V + A+ NA+ VI+ HNH Sbjct: 114 EMVYLEREIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNH 173 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PSGD TPS+ D+ IT+RL QA +++ + + DH+IV R +SF E G L Sbjct: 174 PSGDPTPSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 79/127 (62%) Query: 32 LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPR 91 +R+ +F + RD+L ++ G E F +L+LNQQ+ IA E L AG+ + V R Sbjct: 96 MRQPSWSFKTAADVRDYLLMQFKGQALEAFGVLFLNQQHGFIAFERLAAGAAAKVPVPVR 155 Query: 92 EVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 +++ AL+ +AAAVILAHNHP+G PS D+ +T+ L AL L+DIR+ DH IV G ++ Sbjct: 156 QLIASALHHHAAAVILAHNHPAGSGAPSAEDRDVTRHLDDALALMDIRLLDHFIVAGNEM 215 Query: 152 YSFAEHG 158 S E G Sbjct: 216 VSMRERG 222 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 2/133 (1%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 L++ R+ V +T+ ++L++K+ G ++E FM+L+LN QN L+ + + G++ Sbjct: 97 LEQKARDVDVLDNTTKIV-NFLRMKLGGGKKETFMVLFLNAQNHLLCFDVI-PGTVDRAT 154 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 V+ REV+++A+ A AVILAHNHP+G PS AD +T + Q LQ V I + DH+IV Sbjct: 155 VYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTIRQVLQPVGILLHDHIIVA 214 Query: 148 GRQIYSFAEHGLL 160 +SFA +L Sbjct: 215 PSCYFSFASRRML 227 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 10/154 (6%) Query: 17 AQRTVKRALTLLDRHL--RETGVAFT--STQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 A+ T RA+ L R L E FT ++A +L +AG +EEF +L L+ +N+L Sbjct: 80 AKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDTKNRL 139 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 + + G + + VHPREV + AL + A +ILAHNHPSGD +PS D T+ L++A Sbjct: 140 MRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKNLIEA 199 Query: 133 LQLVDIRVPDHLIVG------GRQIYSFAEHGLL 160 +++ ++V DHLI+G RQ S + GL+ Sbjct: 200 GEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 66/109 (60%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 ++ L +EEF + +N +N++I E L G++ T V+PREVV AL NA+ VIL HNH Sbjct: 117 RIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNH 176 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 P GD +PS D T + Q ++IR+ DH+IV + +SF E G L Sbjct: 177 PGGDPSPSPEDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 84/142 (59%), Gaps = 4/142 (2%) Query: 23 RALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 + +T L R + ++ G FTS QA D+ L++E +L + + +L++ +T+ Sbjct: 89 QCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKGELLSEKTI 148 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 G+++ + V PRE+ AL A VIL HNHPSG+ PS D+ +T R+ ++ +L++I Sbjct: 149 SVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVHESGKLLEI 208 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 + DH+I+G R+ +SF E G + Sbjct: 209 PLMDHIILGDRRYFSFREEGFI 230 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 48/104 (46%), Positives = 67/104 (64%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E F L L+ +++LI + GS+ + VHPREV K AL +AA+VILAHNHPSGDT Sbjct: 125 KKEYFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDT 184 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D ++ RL +A ++ I V DH+I+GG+ S GLL Sbjct: 185 EPSHDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 75/121 (61%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 T +A +L+ K+ + E+F ++YL+ N++IA E +G++ + ++PRE+ KR + Sbjct: 122 TDKEALLKFLRNKIGYEDVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIM 181 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 NA ++I+AHNHPSG+T PS+ D IT + + L+ + +H+I+ +SF E GL Sbjct: 182 ENAKSIIIAHNHPSGNTCPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGL 241 Query: 160 L 160 + Sbjct: 242 I 242 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 5/139 (3%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKL--KMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A+ R L + G+ + D LK+ ++ ++E F+ L L+ + LI T+F G Sbjct: 84 AIEFSKRFLLKEGIKIKNVD---DVLKITEELKDKKQEYFLSLTLDGASNLIQKRTVFIG 140 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 +++ + VHPRE+ A+ AA +I HNHPSGD+ PS+ D IT+RLV+ +++ I V Sbjct: 141 TLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEIGKMLGIEVI 200 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH+I+ YSF G+L Sbjct: 201 DHIIISKNGYYSFQAEGML 219 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 T+ AA+ ++ ++ L++E F+ L L+ +++++A +T GS+ ++ VHPRE+ +RA+ Sbjct: 110 TAEDAAK-YVMDRLRYLKKEHFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIR 168 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 +A++++ HNHPSGD +PS D +T+RLV+A +++ I V DH+++G + S G Sbjct: 169 ISASSILCIHNHPSGDPSPSPEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGY 228 Query: 160 L 160 L Sbjct: 229 L 229 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 72/109 (66%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 +M+ L++E +++LN +N +I + +F GS++++ VHPRE+ K A+ ++ +I+ HNH Sbjct: 121 EMSLLKQEILKVIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNH 180 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PSGD TPS+ D IT R+ + +++ I++ DH+I+G S E G + Sbjct: 181 PSGDPTPSKEDINITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 3/147 (2%) Query: 17 AQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 +++ V A L + L+E V A S+ + + + EE +L LN ++LI Sbjct: 71 SRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSSSKLI 130 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + G I++ V R ++K+ALY+NA + I+ HNHPSG PS AD +T+ + +A Sbjct: 131 RKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAVKKAA 190 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +DIR+ DH+IV G YS+A+ G L Sbjct: 191 ETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 68/105 (64%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L+RE F ++ LN N +IA T+ G ++++ V PR V +RA+ NAA +I HNHPSG+ Sbjct: 140 LKREVFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGN 199 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D IT++LV+A +L+ I V DH+I+ G S AE GL+ Sbjct: 200 PEPSAEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 +D H + + TS A ++LK ++ +E + LYLN N LIA E + GS++ Sbjct: 100 MDDHAEK--IKITSVSDAFNYLKF-LSKETQEHMVALYLNSSNHLIAQEVIAKGSLNVVR 156 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 V PR+++ A+ N +I++HNHP+ D TPSQ D T++L + + DH+IVG Sbjct: 157 VLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTKKLQTLANELGFDLLDHIIVG 216 Query: 148 GRQIYSFAEHGLL 160 + YSFA+ GL+ Sbjct: 217 KKDFYSFAKAGLI 229 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 74/122 (60%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F +++ A D+ ++ LE E FM+L LN + +LI + L G+++ T + REV + AL Sbjct: 106 FNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYTCITSREVYRYAL 165 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 A +I+ HNHPSGD TPS+ D T++L +A +LV I + DH+I+G + S E Sbjct: 166 SKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQD 225 Query: 159 LL 160 ++ Sbjct: 226 MI 227 >UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL1_9SPHI Length = 157 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 5/133 (3%) Query: 29 DR-HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 DR +R + A+ A+ D +L M E+F +L L+QQN +A + G S+ Sbjct: 27 DRIQIRSSATAYEILLASWDQNRLDMV----EQFKILLLDQQNNCLAVSEIATGGTSACL 82 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 P+ + AL A +ILAHNHPSG+ PS+ADK++T++L +L+DI V DHLIV Sbjct: 83 ADPKVIFATALKTRATGIILAHNHPSGNLAPSEADKSLTRKLKDGGKLLDIAVLDHLIVT 142 Query: 148 GRQIYSFAEHGLL 160 SFA+ GL+ Sbjct: 143 SHNYRSFADDGLM 155 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 75/124 (60%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 + ++ ++ D+L+L + + E + L LN+QNQLIA L G+++ V+ RE+VK Sbjct: 101 IILSNPKSVADYLRLHLGHEKIEVSVALLLNRQNQLIAVRELSRGTVAENTVYIREIVKL 160 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 AL A ++ILAHNHP PS++D T+RL QAL LVDI + DH IV ++ S E Sbjct: 161 ALDEYADSLILAHNHPGSSARPSESDVQFTERLKQALSLVDITLLDHFIVTAKETCSLRE 220 Query: 157 HGLL 160 G + Sbjct: 221 QGYM 224 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 73/122 (59%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F S + + ++ E+E + + L+ QN L+ L G++++T + PREV AL Sbjct: 110 FNSPDSIAAYYMEQLRHQEQEIMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEAL 169 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 ++A +IL HNHP G+ PS+ DK IT+R+ QA +++ I + DH+I+G + SF E G Sbjct: 170 RYHAVNLILIHNHPGGNPAPSKCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEG 229 Query: 159 LL 160 L+ Sbjct: 230 LM 231 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 Q ++L + + ERE +LYLN++ QLI E+ + G + V+ +E+ ++AL NA Sbjct: 102 QGIVEYLNVSIGHSERECVKILYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNA 160 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++I++HNHP G PS+ D+ +T+ L A V +++ DH+I+ +SF E+GLL Sbjct: 161 TSIIMSHNHPGGSLEPSEEDQAVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 84/131 (64%), Gaps = 4/131 (3%) Query: 32 LRETGVAF--TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVH 89 LR G ++ +ST+ ++L +M GL++E F +++L+ + +I E + GS++ VH Sbjct: 104 LRLEGKSYLHSSTEVV-EYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAEGSLTVNTVH 162 Query: 90 PREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 PRE++ +AL +AAA+I++HNHPSG PS D +T+ L + I++ DH+I+G Sbjct: 163 PRELLVKALEHHAAALIISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQLLDHIIIGD- 221 Query: 150 QIYSFAEHGLL 160 YSFA+HGL+ Sbjct: 222 GAYSFADHGLM 232 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 3/130 (2%) Query: 31 HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHP 90 H ET F ST+ A +L + E+F +L LN N LI E + GS++ T V P Sbjct: 98 HREET---FNSTRGAVSYLSALLCTERSEKFCILALNSTNDLIQMEEIQRGSVNRTAVFP 154 Query: 91 REVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQ 150 R VV+ +L A AVILAHNHP GD PS AD+ +T+RL + L +DI V DH+I+ G + Sbjct: 155 RLVVEASLKHRATAVILAHNHPGGDPNPSAADQQLTRRLKRILNDLDIIVHDHIIIAGPR 214 Query: 151 IYSFAEHGLL 160 YSFAEHG L Sbjct: 215 YYSFAEHGGL 224 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 71/114 (62%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+L+ + + E + L LN+QNQLIA L G+++ ++ RE+VK AL A ++I Sbjct: 111 DYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLI 170 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AHNHP G PSQ D T+RL QA+ LVD+ + DH IV + + SF + GL+ Sbjct: 171 IAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A+ L+ +R+ G + A +L+ +A E+F +L+L++ +LIA E L G+I Sbjct: 86 AIRLMRARIRQ-GDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLAQGTI 144 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 T V+PREV++RA+ A+ +IL HNHP + TPS+ D +T+RL Q ++ + V DH Sbjct: 145 DQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLTVRDH 204 Query: 144 LIVGGRQIYSFAEHGLL 160 +IVG SF + GLL Sbjct: 205 VIVGNGASISFRQAGLL 221 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 3/156 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + E S I QT + L A + + + R + G +S + L +M E+E Sbjct: 69 LKEISGIGQTKAIELRAMIELGKRIQTTTR--KRYGQVLSSKEYGMS-LAFEMQNFEQEH 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 YL+ QNQ+I +T+F G+ + PRE++ A+ + +++AHNHPSG+ PSQ Sbjct: 126 LTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQ 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 ADK T+++ A + I DH+IVG YSF E Sbjct: 186 ADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRE 221 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 67/105 (63%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L EEF +LYLN N++I LF+G I+ T V R + K AL A A+IL HNHPSG Sbjct: 121 LPHEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGS 180 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TTPS+ D +TQR+ A +++DI++ DH+IV ++ SF + L Sbjct: 181 TTPSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ITX8_GEOTN Length = 126 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 8/123 (6%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F + + WL K++ + LN +N+++A GS++++ VHPREV K A+ Sbjct: 10 FLCDRTLQKWLNFKLSN-------TMCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAI 62 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY-SFAEH 157 NAA++I+AH HPSGD TPS+ D +T+RL +A +++ I V DHL++ + Y S E Sbjct: 63 LNNAASIIVAHQHPSGDVTPSKEDVEMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKER 122 Query: 158 GLL 160 G Sbjct: 123 GFF 125 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 65/105 (61%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 ++ EE LYLN N+++ + + G + +T V R V+KRAL A +IL HNHPSG Sbjct: 109 MKHEECWCLYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGA 168 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ DK +T+++ +A L DIR+ DHLI+ YSF + GLL Sbjct: 169 ALPSEQDKILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 70/108 (64%) Query: 53 MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + ++RE +++ L+ +N++ + G+++S+ VHPREV K A+ N A++ILAHNHP Sbjct: 38 LGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGASIILAHNHP 97 Query: 113 SGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SGDT+PS+ D IT R+ + L+ I + DH+I+G + S G++ Sbjct: 98 SGDTSPSKDDINITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII 145 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 3/106 (2%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 +RE F+++ LN QN+++A GS++S+ VHPR+V K A+ N+ ++++AH HPSG Sbjct: 49 DREIFLVMCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMV 108 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIV--GGRQIYSFAEHGLL 160 PS ADK +++RL A +L+ I V D LIV GR YS E G L Sbjct: 109 LPSDADKDVSKRLYDAGKLIGIEVLDSLIVNDAGR-FYSLREKGYL 153 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 68/103 (66%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 RE F +L L+ +N+++ + G++++T VHPREV + A+ +AA +I+AHNHPSGD Sbjct: 123 REHFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPA 182 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D +T+ L +A L+ I V DH+IV +SFAE GLL Sbjct: 183 PSAEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 4/124 (3%) Query: 37 VAFTSTQAARDWLKLKMAGLE----REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 V TST A ++ K A L +EEF ++ L+ +++ I + G++ S+ VHPRE Sbjct: 195 VKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHPRE 254 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 V + A+ AAAV+L HNHPSGD TPS+ D +T+RL +A +L+ I V DH++V ++ Sbjct: 255 VFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQRCL 314 Query: 153 SFAE 156 S E Sbjct: 315 SLRE 318 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 69/116 (59%) Query: 45 ARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAA 104 A +K ++ RE FM ++ + + LI +E + GS+S T VHPREV A+ AA+ Sbjct: 114 AYQLVKDELENENREIFMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAAS 173 Query: 105 VILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +I+ HNHPSGD PS D +TQ L++ +L+ I + DHLI+G SF + LL Sbjct: 174 LIVVHNHPSGDPMPSNQDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 66/102 (64%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF ++LN++ QL++ + G ++ T V R + +AL A A+ + HNHPSG+ P Sbjct: 126 EEFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRP 185 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQAD +TQ++ QA +L+DIR+ DH+IV + YS+ E G L Sbjct: 186 SQADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJC8_9FIRM Length = 158 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 3/120 (2%) Query: 41 STQAARDWLK--LKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 S + A +++K + + E F+++ ++ +++ + + G+++ + VHPREV + L Sbjct: 31 SPEDAAEFIKSVIDFDTVPCELFIVVPIDSKSKPLCVTVVTKGTLNCSLVHPREVFQPCL 90 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 NAAA + HNHPSGD TPS+ DK IT+RLV+A ++D+ V DH+IVG YSF G Sbjct: 91 LANAAACFVFHNHPSGDVTPSREDKAITERLVKAGHILDVPVLDHIIVGD-NFYSFRTDG 149 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 65/100 (65%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E + LYLN QNQ+I+ +T+F GS++ + PRE++ A+ A ++I+ HNHPSG Sbjct: 122 KQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSV 181 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 PS+ D T+ L ++ + + + + DHLIVG + YSF E Sbjct: 182 QPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFRE 221 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 72/116 (62%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 + R +L+L + G E F ++ +QQ++L+ + LF G++ T V+PR ++KRAL +A Sbjct: 144 ERVRAYLRLLVQGRGMECFGAMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDA 203 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +IL HNHP G S D +T+R+ +A +++++ DH ++ +++ SF EHG Sbjct: 204 RGMILFHNHPGGTPHASNEDIELTRRMAEACAPLELKILDHFLIADKEVLSFREHG 259 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 72/122 (59%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 + QA D+L+ MA E +L+LN +N L+ E + GS+ V+ RE+++RAL Sbjct: 109 LSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRAL 168 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +AA+I+ HNHPSGD PS+ D +T+ L+ A + + I + DH++VG R S G Sbjct: 169 ELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALG 228 Query: 159 LL 160 L+ Sbjct: 229 LI 230 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 67/110 (60%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 + +S WL L++ E+E F +L+L+ QN LI + LF G+ + VHPR+V + Sbjct: 108 IKLSSCDRIVRWLNLEIGFEEQELFRVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFRE 167 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 A+ NA+ ++L HNHP G + S+AD +T+ L++ ++ I V DH+IV Sbjct: 168 AVRCNASRIVLVHNHPGGSLSASEADVEVTRALIEVGMMIGIEVVDHIIV 217 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 64/93 (68%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E F L L+ +N+LI + + G++ ++ VHPREV K A+ +AA VIL HNHPSGD Sbjct: 301 KKEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDP 360 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 PS+ D ITQ++ +A +++I+V DH+I+ + Sbjct: 361 EPSENDVEITQKIAKAGNILNIKVLDHVIIAEK 393 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 67/105 (63%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L +E+ +L L+ Q+++I +T+F G+++S VHPRE+ + A+ AA VI+AHNHPSG Sbjct: 102 LLQEQLEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQ 161 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS +D+ QRL QL+ I + D +VG +SF E G+L Sbjct: 162 PQPSTSDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/114 (42%), Positives = 77/114 (67%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 ++L + RE F ++++ +N++I ETL GS++ + V+PREVV RAL +AAA+I Sbjct: 115 NYLNHTLRDRHRETFAAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALI 174 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 HNHPSG+ PS+ D IT++LV A + + I V +H+IVG R +SFA++G + Sbjct: 175 CCHNHPSGEPEPSRQDIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_C0YH45 DNA repair protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YH45_9FLAO Length = 147 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 67/103 (65%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 RE F +Y+NQ N+++ + + I+S+ V R +++ AL NA + I+AHNHPSG+ T Sbjct: 45 RESFYSMYMNQANKVLGIQKISESGITSSLVDIRIIMQGALLCNAVSFIIAHNHPSGNLT 104 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D ITQ++ +A QL++I + DH I+ +SF+ G+L Sbjct: 105 PSREDINITQKIKEAAQLLNINMLDHCIITSTDSFSFSNEGIL 147 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 89/153 (58%), Gaps = 11/153 (7%) Query: 19 RTVKRALTLLDRHLRETGVAFTS--------TQAARDWLKLKMAGLEREE---FMMLYLN 67 R K AL R +RE AF ++ RD + L REE F+++ LN Sbjct: 2 RRRKHALPAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIALN 61 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 Q+++IA + + G + + VHPREV + A+ AAA+I+AHNHPSGD PS D+ +T+ Sbjct: 62 AQHRMIALQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVTE 121 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +LV A +L+D+ V DH+IVG SFAE GLL Sbjct: 122 QLVAAGRLLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 61/104 (58%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E F + LN +IA E + G ++ HPREV K A+ A++VIL HNHPSG Sbjct: 121 KKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCV 180 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TPS D IT+RL+ A +++ I V DH+I+G S + G + Sbjct: 181 TPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 67/103 (65%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F +L+LNQ +Q++ + + G I+ T V R +++ AL N+ A+ILAHNHPSG+ Sbjct: 51 KEYFKVLFLNQSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLK 110 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D IT+++ A QL+ I V DHLI+ YSFA+ G L Sbjct: 111 PSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL 153 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 65/104 (62%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 + AG +E ++L+L+ +NQ+I + + G++ S PR V + AL +A +I+ HNH Sbjct: 112 RFAGANQESMLILFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNH 171 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 PSGD +PSQAD+ T R A L+ + + DHLI+G + YSFA Sbjct: 172 PSGDPSPSQADRDTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7RA56_9THEO Length = 208 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 13/137 (9%) Query: 35 TGVAFTSTQAARDWLKLKMA-------GLERE----EFMMLYLNQQNQL--IAHETLFAG 81 + V F S + A + K ++ GLE++ + ++ + N + IA ET+ G Sbjct: 67 SSVVFESKEQALEKFKKQLGEKSYLLEGLEKDNPLPQSYIVKVKDANLIKDIAIETISIG 126 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 S++++ VHPREV K A+ +A+++IL HNHPSGD TPS+ D +T+RLV+A ++ I+V Sbjct: 127 SLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEAGNILGIKVL 186 Query: 142 DHLIVGGRQIYSFAEHG 158 DH+I+G + S E G Sbjct: 187 DHVIIGDGRGISLKEKG 203 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 67/122 (54%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F+S + D+ M RE +++LN + +LI + G+I S V PRE+ A Sbjct: 110 FSSPRTIADYYMEDMRHRTREILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAF 169 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 NA +IL HNHP GD TPS+ D IT+R+ +A +L+ IR+ DH+++G S E G Sbjct: 170 KRNAYGIILLHNHPGGDPTPSREDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKG 229 Query: 159 LL 160 Sbjct: 230 FF 231 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 70/113 (61%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +L+ K+ E E+F ++YL+ N++I E G++ + V+PRE+ K+ + NA ++IL Sbjct: 120 YLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIIL 179 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AHNHPS + TPS++D +T + + L+ + +H+I+ +SF E GL+ Sbjct: 180 AHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 72/116 (62%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 T + LK M+ L +E ++L L+ + L+ +ET++ G+ SS +V +++ K A+ Sbjct: 94 ITESSEVYHLLKEDMSYLRKEHLIVLCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAV 153 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 A +I+ HNHPSGD+TPSQAD +T+ + A +++ I + DH+I+G + +S+ Sbjct: 154 RIGAFGIIVVHNHPSGDSTPSQADDKLTKLIKNAGEVLSIELIDHIIIGRNEFFSY 209 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 70/114 (61%) Query: 34 ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 E + F + ++L+ K+ ++E+ ++LYLN +NQL + G ++ V P ++ Sbjct: 100 ENKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDI 159 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 + A+ A AVI+AHNHPSGD TPS+ D T R+ +A +++ I++ DH+I+G Sbjct: 160 FREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHIILG 213 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L +EE +L LNQ ++I+ E L G +S T R ++ +A+ A+A+ILAHNHPSG Sbjct: 122 LPQEEMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGT 181 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY-SFAEHGLL 160 PS+ D +TQR+ +A L+ R+ DHLI+G Y SFA+ GLL Sbjct: 182 VRPSEQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 69/113 (61%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +L K+ G ++EE LY++ N+++A + +F G+++ + HPRE+ + A+ ++ + + + Sbjct: 95 YLADKLVGHKQEELWALYVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFI 154 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AHNHPSG PS D +T+ L +A +++ I + DH IVG Q S E L Sbjct: 155 AHNHPSGKLIPSSNDFELTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 7/149 (4%) Query: 19 RTVKRALTLLD-RHLRETGV----AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 RT++ L +++ R +RE + S QA + + +++ +RE F +L + Q+I Sbjct: 9 RTMENELEVVNIRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVI 68 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + G+I+++ V PREV K ++ NA+A+I HNHPSG+ PS+ D +T++L + Sbjct: 69 NMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCG 128 Query: 134 QLVDIRVPDHLIVGGR--QIYSFAEHGLL 160 QL+ I + DH+IVGG ++ SF E +L Sbjct: 129 QLLGIELLDHIIVGGTNGKMLSFREEKML 157 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 65/103 (63%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E ++L L+ +NQ+ +F G ++S EVHPRE++ L +++ IL HNHPSG+ Sbjct: 120 QEHLVLLCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVE 179 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D T+++ + L+ IR+ DHLIVG + +S AE+ +L Sbjct: 180 PSMNDVAFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ77_SPHAL Length = 354 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 68/111 (61%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +LKL M L E +L+L+ +LIA E L G+I ++PR + +RA+ +AAA+IL Sbjct: 108 YLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIIL 167 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 HNHPSGD TPS+AD T RL + ++I++ +H++V R + + G Sbjct: 168 VHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQG 218 >UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q559_9BACT Length = 137 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 68/103 (66%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F + LN +N + E + G+++S + PREV + A++ A ++L HNHP+GD Sbjct: 34 KEHFWTVGLNNKNVIQYIELVSLGTLTSAVLGPREVFRLAVHKAIANILLVHNHPAGDPE 93 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D ++TQRL+ A Q++ I+V DH+I+G + YSF E G++ Sbjct: 94 PSKEDVSVTQRLISAGQILGIQVLDHVIIGNPEYYSFKERGII 136 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 80/120 (66%), Gaps = 1/120 (0%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 + T AA+ ++++M+ L++E+ + L+ +N++ +T++ GS+ ++ V E+ K + Sbjct: 110 SPTDAAQ-LMQIEMSHLDQEQLRAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIR 168 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 N+A++I+ HNHPSGD TPS D +T+++++A +L+DI V DHL++G + S E GL Sbjct: 169 LNSASIIVVHNHPSGDPTPSPEDVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 78/133 (58%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 L+ + + + S++ D+L+ ++ G ++E F +L L+ + + + + LF GS+++ Sbjct: 110 LNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDSELRKLNFKKLFYGSLNACN 169 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 + ++ AL +A +++AHNHP G PS AD +T +L QA QLV+I++ DH I+ Sbjct: 170 ISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQLYQACQLVEIKLLDHFIIA 229 Query: 148 GRQIYSFAEHGLL 160 +SFAE LL Sbjct: 230 KDGTFSFAERALL 242 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Query: 17 AQRTVKRALTLLDRHLRETGV-AFTSTQAARDWLKLKMAGL---EREEFMMLYLNQQNQL 72 A+ TV A L R L G F + D L M L E F+++ LN + ++ Sbjct: 73 AKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLVVLLNSKGKV 132 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I E + GS++++ VHPRE AL +AAA++ HNHPSGD TPS+ D+ +T+ L Sbjct: 133 IGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDRELTRTLWDT 192 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++ I + DHLI+G YSF EHGLL Sbjct: 193 GKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 77/122 (63%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 +S A + + +A E EEF +L+LN++N LIA ETL G++ V+PREV+KRAL Sbjct: 132 ISSWDAVLTYCRTSLAHKETEEFHVLFLNRRNMLIADETLGVGTVDHVPVYPREVLKRAL 191 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 N+ A+IL HNHPSGD +PS +D +T+ + QA + I + DHLI+G SF G Sbjct: 192 ELNSCAIILVHNHPSGDPSPSSSDIEMTKLIKQAADSLSITLHDHLIIGATGETSFVSEG 251 Query: 159 LL 160 LL Sbjct: 252 LL 253 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 76/125 (60%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G+ +T + ++ M L+ E+ +L + +++L+ E + G+++++ + PREV Sbjct: 107 GIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFL 166 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 A+ + A +IL HNHPSGD TPS+ D +T+R+ +A +L+ + + DH+I+G + S Sbjct: 167 LAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLK 226 Query: 156 EHGLL 160 E G++ Sbjct: 227 EQGII 231 >UniRef50_Q1LP02 DNA repair protein RadC n=2 Tax=Burkholderiales RepID=Q1LP02_RALME Length = 138 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 44/99 (44%), Positives = 70/99 (70%), Gaps = 1/99 (1%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 P A + ++ A ++++ + + G AFTS +A +D+L+ K+AG E E F +L+L+ +++LI Sbjct: 23 PADADQILEAARQVIEQKM-QRGEAFTSPEAVKDYLRAKLAGFEHEVFAVLFLDTRHRLI 81 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + +F G+I + EVHPREVVK+AL NAAAVI+AH P Sbjct: 82 DYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVAHYVP 120 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 79/142 (55%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 RTV+ ++ + R + S ++ D+L+L + E +L+LN++ LI Sbjct: 95 RTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQ 154 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 G+ T + RE++K+ L A+A+++AHNHPSG+ PSQ D IT +L + Q VD+ Sbjct: 155 ELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDV 214 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 ++ DH IV +SF +GLL Sbjct: 215 QLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 73/122 (59%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F+ +A + K+ ++E F++ +LN +N+L+ ++ + GS+ + V +E ++ AL Sbjct: 106 FSFPEAVASYFMEKLRHEDQEHFIVCFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWAL 165 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 F A +IL HNHPSG PS AD +T++ +A DIR+ DH+I+G + S ++G Sbjct: 166 RFKAHGMILVHNHPSGYPEPSDADINLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNG 225 Query: 159 LL 160 L+ Sbjct: 226 LV 227 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 68/105 (64%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 L++E F +++LN N +I T+ G +SS+ V PR V ++A+ +AAAVI HNHPSG+ Sbjct: 128 LDKEVFKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGN 187 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D IT++L +A + I V DHLI+ G + S AE G++ Sbjct: 188 PEPSREDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 71/104 (68%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E F++L L+ ++QLI+ + ++ G+I + VHPREV + AL +AA +I+AH HPSG+ Sbjct: 125 DQETFVVLALDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNC 184 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +PS+ D +T+RL + + + I + DH+IVG + +S + G L Sbjct: 185 SPSRDDIEVTKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLA8_9BACT Length = 147 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 63/101 (62%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 RE +LYLNQ N++IA+ T+ G ++ T V R +++ AL NA +I AHNHP+G+ Sbjct: 44 REYAKVLYLNQANEVIAYNTISEGGLTETAVDVRIILQGALLTNATQIIFAHNHPTGNLK 103 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 PS D +T+ L +A Q++ IR DH+I+ YS+ E G Sbjct: 104 PSPQDDMLTRELQKACQIMRIRFTDHIIMSVDSYYSYREEG 144 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 70/114 (61%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D L ++ ++E F +L L+Q+++L + GS+S T VHPRE + A+ +AAAV+ Sbjct: 118 DILGARLRDEKKESFWVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVL 177 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 HNHPSGD PS D ++T+RL + +L+ IRV DH+++G S E G L Sbjct: 178 FVHNHPSGDPEPSSDDWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 4/156 (2%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMML 64 + P + +T +K ++ L R E G + ++ A K M L+ E + Sbjct: 73 KYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCI 132 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 Y++ +N+ ++ + G ++ PR++ K AL N+A +ILAHNHPSGD TPS+ D Sbjct: 133 YMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVI 192 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL++A +++ I V DHLI+ S E + Sbjct: 193 FTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 1/120 (0%) Query: 40 TSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALY 99 T+ + ++ +++ +M + E ++L L+ + +LI T+ G+I+ + + PREV +AL Sbjct: 109 TAAKISKRYME-EMRHFKEEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALK 167 Query: 100 FNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 + A ++L HNHPSGD TPS+AD +T ++++ +LV I + DH+I+G SF E GL Sbjct: 168 YEAVNLVLIHNHPSGDPTPSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 72/123 (58%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 +F ++ + M +E+EE ++ N +N LI LF G+++++ RE+ A Sbjct: 121 SFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEA 180 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 L ++A + L HNHPSGD +PS D +T+++ QA +L+ + + DH+I+G +SF E Sbjct: 181 LRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKER 240 Query: 158 GLL 160 G++ Sbjct: 241 GII 243 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 70/113 (61%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 V S Q+ ++LK + L +E F++L ++ + ++I +F GS+S + VHPREV K Sbjct: 103 VKCDSPQSIANYLKSSLENLTQEVFVVLDIDTKGKIIEKREVFKGSLSMSVVHPREVFKL 162 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 A+ +A++++ HNHPSGD TPS D T L++ ++V I + DH++V + Sbjct: 163 AIKNSASSIVCVHNHPSGDATPSIEDIKTTINLMEVGEIVGIEMLDHIVVAKK 215 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 66/114 (57%) Query: 47 DWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVI 106 D+L+ + RE F +++L+ + E L G++ V+ REV++ AL +AAA++ Sbjct: 142 DYLRALLEFETRESFRVIFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALV 201 Query: 107 LAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L HNHPSGD TPS AD +T + A + + V DHL+VG + SF GLL Sbjct: 202 LVHNHPSGDPTPSAADVQVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 60/102 (58%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F +LYLN ++++ H + G I+ T V P+ + + AL A VIL HNHPSG+ P Sbjct: 135 ESFHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRP 194 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S AD IT++L A +L+DI V DH+IV S E G + Sbjct: 195 STADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 71/124 (57%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 + + Q D+ +M L E + Y + +++ + + + GS+SS+ V +++ Sbjct: 106 IRMNNPQTIADYYMEQMRHLTNEVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRT 165 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 AL NA+ ++L HNHPSGD TPS+ D +T RL++ + I + DH+I+G + YSF E Sbjct: 166 ALDKNASKLVLLHNHPSGDCTPSRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYE 225 Query: 157 HGLL 160 + L+ Sbjct: 226 NKLI 229 >UniRef50_A5FDW5 DNA repair protein RadC n=4 Tax=Flavobacterium johnsoniae UW101 RepID=A5FDW5_FLAJ1 Length = 156 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 2/117 (1%) Query: 44 AARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAA 103 A ++W + K+ +E+ + M+L +Q ++++ + +G I+ T V R + AL A Sbjct: 42 ALQNWDENKIEFIEQCKIMLL--SQSHKVLGIYEMSSGGIAGTVVDIRLLFTAALKAAAV 99 Query: 104 AVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 VIL HNHPSG+T PS AD+ IT + V+A Q +D+++ DHLI+ YSFA+ G L Sbjct: 100 NVILIHNHPSGNTAPSDADRQITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL 156 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/105 (40%), Positives = 64/105 (60%) Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 ++RE F +L L Q+I G+++S + PRE+ K ++ NAA+VIL HNHPSGD Sbjct: 35 VDRELFFVLNLKTNGQVINVNIASMGTLNSCILSPREIFKASILSNAASVILMHNHPSGD 94 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TPS+ D +T+RLV +L+ I V DH+I+G S E ++ Sbjct: 95 CTPSKQDVLMTKRLVACGELIGITVLDHVILGKETYLSMKEANMM 139 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 41/95 (43%), Positives = 61/95 (64%) Query: 52 KMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNH 111 ++ + E F L L+ +N++I+ E + G+I+ + VHPREV K A+ A ++IL HNH Sbjct: 115 EIGSCDVENFYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNH 174 Query: 112 PSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 PSG PS AD +T+RL + LV I+V DH+IV Sbjct: 175 PSGSLIPSNADIEVTKRLDKVGDLVGIQVLDHIIV 209 >UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MR78_BDEBA Length = 170 Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 6/146 (4%) Query: 16 TAQRTVKRALTLLDR-HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + Q ++K + L R ++RE + + + R+ + EE ++ L+ Q L+ Sbjct: 16 SGQFSIKNPVILQQRTNMREVSTSLQAYEILRNEI-----NPHAEELWVIALDSQMNLVL 70 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E LF G++ +HPR++ + + NA++ ILAHNHPS + PS+ D +T+R+ Q Q Sbjct: 71 KEMLFRGTVDFCMIHPRDIFRCLVQANASSFILAHNHPSQNVLPSEQDLILTRRIHQLAQ 130 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +I + DHL+V +S A+HG Sbjct: 131 MFEIPLNDHLVVCENNYFSMADHGYF 156 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 66/98 (67%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F +L L+ +++L+ + G+ + T HPRE+ + A+ NA+ +I+AHNHPSG+ +P Sbjct: 138 ERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSP 197 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 SQAD +T++++QA QL++I V DHLI+G S E Sbjct: 198 SQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 66/103 (64%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F +L L+++N+ I H + GS T V P+E++K+ +A A+IL HNHPSGD + Sbjct: 133 KEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPS 192 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D +T++L QA +LV ++ DH+IVG Q S A L+ Sbjct: 193 PSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 63/102 (61%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + LN +N++I + GSI+S+ VHPRE + A+ NAA+++ HNHPSG+ Sbjct: 49 EVFGVFNLNTKNEIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDA 108 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D+ +T+RL + +++ I + DH+I+G + S E G + Sbjct: 109 SPEDREVTKRLAECGKILGIELLDHVIIGEHRFVSLREKGCI 150 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 68/118 (57%) Query: 43 QAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA 102 + A +L+ + ERE FM++ L+ + +++ T+ GS++ EVHPREV + + A Sbjct: 127 REAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGA 186 Query: 103 AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L HNHPSGD PS+AD +T R+ + + I V DH++V S AE GL+ Sbjct: 187 HTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 66/113 (58%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 +L + L RE F +L N +N L+ + G++++ V PREV AL A +++L Sbjct: 111 YLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVL 170 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AHNHPSGD PS D +T+ LV QL++I+V DH+++G S E GL+ Sbjct: 171 AHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 83/140 (59%), Gaps = 3/140 (2%) Query: 23 RALTLLDRHLR--ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 +AL L + + ++ ++ + Q A ++LK K RE + LYL+ N+L+ E + Sbjct: 93 KALVELSKRFKGGKSRISIRNPQEAFEFLKDKFDE-RRESLIALYLDLSNRLLDWEVVAI 151 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G++++ P++++ +A+ +A +I+AHNHP G+ +PS D T+RL +A +L+ + Sbjct: 152 GNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDLNFTERLKKACELLGFEL 211 Query: 141 PDHLIVGGRQIYSFAEHGLL 160 DHLI+ + +SF E G+L Sbjct: 212 LDHLILSEGRYFSFREEGVL 231 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 63/102 (61%) Query: 53 MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + L EEF +LYLN N++I L +G I+ T V R + K AL A ++IL HNHP Sbjct: 118 IGDLPHEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHP 177 Query: 113 SGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 SG TTPS+ D +T+R+ A +DI++ DH+IV ++ YS Sbjct: 178 SGSTTPSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYYSI 219 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 3/123 (2%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL---FAGSISSTEVHPREVVK 95 F+S R++L + GL EE +L LNQ+NQ +A+E + F +S V R++VK Sbjct: 277 FSSADDVRNFLLMHYKGLGFEEVAILLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVK 336 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 L +AAAV+L HNHP+ T S++D T+ + L+ + +R+ DH +V G Q+ S Sbjct: 337 SVLDSDAAAVVLVHNHPAQSTELSESDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLR 396 Query: 156 EHG 158 E G Sbjct: 397 ETG 399 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 70/102 (68%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF + L+ Q++L + G ++S+ VHPREV + A+ AAAVIL HNHPSGD TP Sbjct: 143 EEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTP 202 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D+ +T++LV A +L+DI V DH+IVG + SFAE GLL Sbjct: 203 SAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P+ +P R V+ + L D ++ VA + + L EE + +L+ Sbjct: 17 PKVTFIPRYGVRLVRESQVLYDN--KKITVAADICSICN---TIGLPDLPHEELHVFFLS 71 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +N + + + G+++++ +HPREV + A+ NA A+IL HNHPSG+ PS ADK +T+ Sbjct: 72 TKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTK 131 Query: 128 RLVQALQLVDIRVPDHLIVGGR-QIYSFAEHGLL 160 ++ + ++ I + DH+I+G +SF + GL Sbjct: 132 QIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLF 165 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 75/135 (55%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 A + +R +RE +F S + + K ++ L EE +L+L+ + QL+ L GS Sbjct: 93 AKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHVLFLDTKAQLLKDFLLSKGSS 152 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +++ + RE+ AL + IL HNHPSGD PS+ D+ T+ + +A + + I + DH Sbjct: 153 NASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDERATEEIYKAGEYLGIHLMDH 212 Query: 144 LIVGGRQIYSFAEHG 158 +I+G Q YSF E G Sbjct: 213 IIIGDNQYYSFKEQG 227 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 62/90 (68%) Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 ++E F+ L L+ N+LIA + G+++++ VHPREV A+ AA++I+AHNHPSG Sbjct: 116 KQEYFVCLTLDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSL 175 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIV 146 SQADK +T RL +A +L+ I + DH+I+ Sbjct: 176 EASQADKDVTSRLAEAGRLLGITLNDHIII 205 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 63/102 (61%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F+ + + + +I T+ G++++T VHPREV A+ AA++IL HNHPSGD T Sbjct: 129 QEHFLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPT 188 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 PS+ D +T+ LV +LV I V DH+I+G + S E G Sbjct: 189 PSKEDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 62/99 (62%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E ++L L+ +NQ+ +F G ++S EVHPRE++ L +A + +L HNHPSG+ Sbjct: 117 QEHLLVLCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIE 176 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 PS D T+++ + L+ IR+ DHLIVG + +S AE Sbjct: 177 PSTNDLAFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAE 215 >UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65R62_MANSM Length = 111 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/73 (52%), Positives = 54/73 (73%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 F ST AR +L+ + ERE F++L+L+ Q++LI E +F G+I+S +HPRE++K AL Sbjct: 16 FNSTDTARIYLQTALEQREREIFLVLFLDNQHRLIKQEEMFLGTINSAVIHPREIIKTAL 75 Query: 99 YFNAAAVILAHNH 111 Y NAAA+ILAHNH Sbjct: 76 YCNAAAMILAHNH 88 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 61/102 (59%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF + ++ +N+LI E + G++ V PRE++ AL A+ VIL HNHP GD P Sbjct: 125 EEFWAIMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHP 184 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D+ +T+++ + + +R+ DH+I+ +SF EHG L Sbjct: 185 SFQDRELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 64/102 (62%) Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F++L+++ +N++I + + G++ V PRE+++ A+ A+ +IL HNHP G + P Sbjct: 44 ENFVVLFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEP 103 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D+ +T ++ + + IRV DH+I+ +SF E+G L Sbjct: 104 SKQDRELTSKIKRIAMELGIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 3/114 (2%) Query: 48 WLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVIL 107 W +MA +RE ++L LN + + A E G +++ + R++ K A+ NAA +I Sbjct: 59 WPLFEMA--DREMALVLSLNTKLEPQALEIAAVGGLNACSIDCRDIFKHAVLNNAAFIIC 116 Query: 108 AHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG-GRQIYSFAEHGLL 160 HNHPSGD PS D+ +T+RL + +++ I + DH+IVG G YSF E G+L Sbjct: 117 FHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQGML 170 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 8/147 (5%) Query: 20 TVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 T+ A L R LRET + + D+L M E+E ++L L+ + +LI Sbjct: 85 TLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEKETVLVLLLDTKCRLIKPVE 144 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 + +G+++ + HPR++++ + NA ILAHNHPSG+ PS+ D +T+R+ + +L+ Sbjct: 145 ISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDDLLTERVRECSKLLG 204 Query: 138 IRVPDHLIVG------GRQIYSFAEHG 158 +R DH+I+G + YS+ G Sbjct: 205 VRFLDHVIIGKPTETTNKNYYSYNHPG 231 >UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI5_9FIRM Length = 230 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 65/124 (52%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 V TS QA D+L+ K G +E +L LN + L + + G+I S ++ R +++ Sbjct: 101 VLLTSVQAIGDFLRPKFLGRTKEMVFLLCLNNKGGLTYGDFIAEGTIDSAPMYSRTILEA 160 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 A+ A +VILAHNHP G PS AD T+ + AL IR+ DH I G+ S + Sbjct: 161 AMRSRAVSVILAHNHPHGLAVPSNADLAATESVCHALAAAKIRLLDHFIFAGQDYISLRD 220 Query: 157 HGLL 160 G + Sbjct: 221 SGFI 224 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 234 1e-60 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 205 5e-52 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 200 1e-50 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 191 7e-48 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 189 2e-47 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 186 2e-46 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 184 8e-46 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 184 9e-46 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 184 1e-45 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 183 1e-45 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 181 8e-45 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 178 4e-44 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 178 4e-44 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 178 4e-44 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 178 6e-44 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 177 9e-44 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 177 1e-43 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 177 1e-43 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 176 2e-43 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 176 3e-43 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 175 4e-43 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 175 4e-43 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 174 1e-42 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 174 1e-42 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 173 1e-42 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 173 1e-42 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 173 2e-42 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 173 2e-42 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 172 3e-42 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 172 3e-42 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 172 4e-42 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 171 5e-42 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 171 5e-42 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 171 6e-42 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 171 6e-42 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 171 7e-42 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 171 8e-42 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 171 1e-41 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 171 1e-41 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 170 1e-41 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 169 2e-41 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 169 2e-41 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 169 3e-41 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 169 3e-41 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 169 3e-41 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 169 3e-41 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 169 3e-41 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 169 3e-41 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 168 5e-41 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 168 5e-41 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 168 6e-41 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 168 7e-41 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 167 8e-41 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 167 9e-41 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 167 9e-41 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 167 1e-40 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 166 2e-40 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 166 2e-40 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 166 2e-40 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 166 3e-40 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 166 3e-40 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 166 3e-40 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 166 3e-40 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 165 4e-40 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 165 4e-40 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 164 6e-40 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 164 6e-40 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 164 8e-40 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 164 8e-40 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 164 1e-39 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 164 1e-39 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 164 1e-39 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 164 1e-39 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 163 1e-39 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 163 2e-39 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 163 2e-39 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 163 2e-39 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 163 2e-39 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 163 2e-39 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 162 2e-39 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 162 2e-39 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 162 3e-39 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 162 3e-39 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 162 4e-39 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 162 4e-39 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 162 4e-39 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 161 5e-39 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 161 7e-39 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 161 7e-39 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 161 7e-39 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 161 8e-39 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 161 9e-39 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 161 1e-38 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 161 1e-38 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 160 1e-38 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 160 1e-38 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 160 1e-38 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 160 1e-38 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 160 1e-38 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 160 1e-38 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 160 2e-38 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 159 2e-38 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 159 2e-38 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 159 2e-38 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 159 3e-38 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 159 3e-38 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 159 3e-38 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 159 3e-38 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 159 3e-38 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 159 3e-38 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 159 4e-38 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 159 4e-38 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 158 4e-38 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 158 5e-38 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 158 5e-38 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 158 7e-38 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 157 8e-38 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 157 8e-38 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 157 9e-38 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 157 1e-37 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 156 2e-37 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 156 2e-37 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 156 2e-37 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 156 2e-37 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 156 2e-37 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 156 2e-37 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 156 3e-37 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 156 3e-37 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 156 3e-37 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 156 3e-37 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 155 4e-37 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 155 4e-37 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 155 5e-37 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 155 5e-37 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 155 5e-37 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 155 5e-37 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 155 5e-37 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 155 6e-37 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 154 6e-37 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 154 6e-37 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 154 7e-37 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 154 8e-37 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 154 8e-37 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 154 8e-37 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 154 1e-36 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 154 1e-36 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 154 1e-36 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 154 1e-36 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 153 1e-36 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 153 2e-36 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 153 2e-36 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 153 2e-36 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 153 2e-36 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 153 2e-36 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 152 2e-36 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 152 3e-36 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 152 3e-36 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 152 3e-36 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 152 3e-36 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 152 4e-36 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 152 4e-36 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 152 4e-36 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 152 4e-36 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 152 4e-36 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 151 6e-36 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 151 6e-36 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 151 6e-36 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 151 6e-36 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 151 6e-36 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 151 6e-36 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 151 6e-36 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 151 8e-36 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 151 8e-36 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 151 9e-36 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 151 1e-35 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 151 1e-35 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 151 1e-35 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 151 1e-35 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 151 1e-35 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 150 1e-35 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 150 1e-35 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 150 1e-35 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 150 1e-35 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 150 2e-35 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 150 2e-35 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 150 2e-35 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 149 2e-35 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 149 2e-35 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 149 2e-35 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 149 3e-35 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 149 3e-35 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 149 3e-35 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 149 3e-35 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 149 4e-35 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 149 4e-35 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 149 4e-35 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 149 4e-35 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 148 6e-35 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 148 6e-35 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 147 8e-35 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 147 1e-34 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 147 1e-34 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 147 1e-34 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 147 1e-34 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 147 1e-34 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 147 1e-34 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 147 2e-34 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 146 2e-34 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 146 2e-34 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 146 2e-34 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 146 2e-34 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 146 3e-34 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 145 4e-34 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 145 4e-34 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 145 4e-34 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 145 4e-34 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 145 5e-34 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 145 5e-34 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 145 5e-34 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 145 5e-34 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 145 5e-34 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 144 7e-34 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 144 8e-34 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 144 1e-33 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 144 1e-33 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 144 1e-33 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 144 1e-33 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 144 1e-33 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 143 1e-33 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 143 2e-33 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 143 2e-33 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 142 3e-33 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 142 4e-33 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 142 5e-33 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 142 5e-33 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 141 6e-33 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 141 7e-33 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 141 7e-33 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 141 8e-33 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 139 2e-32 UniRef50_A6DQ92 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 139 2e-32 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 139 3e-32 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 139 3e-32 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 139 3e-32 UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella mult... 139 3e-32 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 139 3e-32 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 139 3e-32 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 139 3e-32 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 139 4e-32 UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteri... 139 4e-32 Sequences not found previously or not previously below threshold: >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 160/160 (100%), Positives = 160/160 (100%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE Sbjct: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ Sbjct: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL Sbjct: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 205 bits (522), Expect = 5e-52, Method: Composition-based stats. Identities = 94/158 (59%), Positives = 120/158 (75%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 L+P T L AQRT++RA+ LLD++LR+ G+AFTS+ AARDWL+L +A ERE FM Sbjct: 23 HGCLLPTTSGLTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFM 82 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +LYL+ Q++L+ ETLFAGS++ +VH REVVK AL FNAAAV+LAHNHPSGD PSQ D Sbjct: 83 VLYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCD 142 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + IT RL +AL+LVD++ DHL+VG I SFAE G L Sbjct: 143 RNITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 200 bits (509), Expect = 1e-50, Method: Composition-based stats. Identities = 93/159 (58%), Positives = 121/159 (76%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 MEQ L L Q+TV++AL+LL+ LRETG +FTS+ A RDWL+L++A LEREEF Sbjct: 1 MEQQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEF 60 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L+L+ Q++LIAHETLF G+I+ T+VHPREVVK L N AAVI+AH+HPSG+ PS+A Sbjct: 61 TALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKA 120 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T R+ QAL LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 121 DRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 191 bits (485), Expect = 7e-48, Method: Composition-based stats. Identities = 75/160 (46%), Positives = 107/160 (66%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 M Q + P LP Q+ + +AL +L+ LR TS +A + WL+L + RE Sbjct: 1 MPHQPMRASLPTLPFAQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGREC 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FM+L+L+ +++L+A ET+ G+ ++T V+PREVV RAL+ AAV++AHNHP+GD TPSQ Sbjct: 61 FMVLFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+T+T +LV AL +VDIRV DHLI+G + S AE G L Sbjct: 121 ADRTLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 84/156 (53%), Positives = 114/156 (73%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 S + TPV ++ QR ++RA+ LL+++ R G +F S+ A + WL+L +A ERE F++L Sbjct: 2 SELMLTPVFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVL 61 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 YL+ QN+L+ HETLF G+I+STEVHPRE+VK AL NAAAVILAHNHPSG PS+AD+ Sbjct: 62 YLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRL 121 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT +V+ L LV++RV DH I+G + SFAE G L Sbjct: 122 ITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 71/150 (47%), Positives = 100/150 (66%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P L T + V A+ L+RH R A TS A RD+LKL++ GL E F +L L+ ++ Sbjct: 18 PTLSFTERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRH 77 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +++ ++ LF G+I + VHPREVV+ + AAAVI AHNHPSG + PSQAD+T+T++L Sbjct: 78 RVLRYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQ 137 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AL L+++RV DH+IVG + SFAE G L Sbjct: 138 DALALIEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 71/146 (48%), Positives = 102/146 (69%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 +A + ++ A ++D+ + + G FTS A +D+L+ K+AG E E F +L+L+ +++LI Sbjct: 25 ASADQILEAARQVIDQKM-QRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLID 83 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + +F G+I S EVHPREVVK AL NAAAVI++HNHPSG+ PS AD+ +T +L QAL Sbjct: 84 YAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALA 143 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVD+R DH+IV G SFAE GL+ Sbjct: 144 LVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 184 bits (467), Expect = 9e-46, Method: Composition-based stats. Identities = 66/141 (46%), Positives = 101/141 (71%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 V RA+ +LD H+ + G TS + +D+L+L++ +RE F +++++ Q++++A+E LF Sbjct: 49 IVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRVLAYEPLF 108 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G+I T V+PR +V+RA+ NAA++ILAHNHPSG T PS+ADK +T RL L+ +D+R Sbjct: 109 FGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSLLESIDVR 168 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH I+G +SFAEHGLL Sbjct: 169 VLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 +Q Q L +T ++ + R+L + FTS R +L+ ++ +RE Sbjct: 62 DQKHFCQMKGLGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDRE 121 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 FM+L+L+ Q++LI E +F G+I+ V+PRE++K AL+ NAAA+ILAHNHPSG +TPS Sbjct: 122 IFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPS 181 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+ +T+ + Q +L++IRV DH I+G +SFAE G + Sbjct: 182 MADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 183 bits (466), Expect = 1e-45, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 104/148 (70%) Query: 13 LPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 + QR ++ AL LL++ +R+ F +++ + WL L+++ LERE FM+LYL+ Q++L Sbjct: 10 VASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRL 69 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I E + G I+STEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ IT RL + Sbjct: 70 IEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDS 129 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L +D++V DHL+VG ++ SFAE G L Sbjct: 130 LSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 4/160 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAF-TSTQAARDWLKLKMAGLEREE 60 + + + P L T+ L L R+L E G A + A +L+ ++ G RE Sbjct: 66 AELARLPGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREV 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FM L+L+ +++LIA E LF G+I++ V+PREVV+RAL NAAAVIL+HNHPSGD PS Sbjct: 126 FMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSS 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD IT L QAL +VD+R+ DH +VG + SFAE GLL Sbjct: 186 ADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEF 61 + + + + +K A+ + R + + + + A +++ +M ++RE F Sbjct: 69 EQLAEVKGVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHF 128 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L LN +N++I+ E + G+++S+ VHPRE+ K A+ +AAA+IL HNHPSGD TPS+ Sbjct: 129 KALLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSRE 188 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+RL +A ++V I V DH+++G + S GL Sbjct: 189 DIDVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 E + + Q L L ++K A TL R ET FTS D+ ++ +E Sbjct: 70 ELNELQQIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKE 129 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ L L+ +N++ + GS++ + VHPREV A+ +AAAVI HNHPSGD PS Sbjct: 130 LFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPS 189 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D IT+RL +A +++ I+V DH+I+G +SF E GLL Sbjct: 190 REDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 69/157 (43%), Positives = 101/157 (64%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 Q P L + R V RAL +L++ + A ++ + D+L+LK+AG E F + Sbjct: 11 QPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGV 70 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 ++L+ QN+ IA E LF G+I+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ Sbjct: 71 VFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADR 130 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+R+ +L L+D+RV DH+IVG YSFAE GLL Sbjct: 131 GLTERICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 178 bits (452), Expect = 6e-44, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 3/152 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + + + A L R +R + + S + ++ +M L++E F+ LYLN Sbjct: 74 GVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEHFVCLYLNT 133 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 +NQ+I +T+F GS++++ VHPREV K A AA++I HNHPSGD PS+ D +T+R Sbjct: 134 KNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTKR 193 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV+ +++ I V DH+I+G + S E G + Sbjct: 194 LVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 177 bits (451), Expect = 9e-44, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 97/157 (61%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + P L + + AL L +RHL E G A + + + ++ E F Sbjct: 68 LARLPGLGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAA 127 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+L+ +++ IA E LF G+I + E+HPREVV+RAL NAAAV++ HNHPSG+ PS+AD+ Sbjct: 128 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 187 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQRL+QAL LVDIR+ DH ++G + S AE G + Sbjct: 188 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + + +K L R+ R A S RD+L+ ++A ERE F++++L Sbjct: 77 IGGVGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFL 136 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + QN++I TLF G++S EVHPRE+V+ A+ NAA +ILAHNHPSG PS+ADK +T Sbjct: 137 DSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVT 196 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+V++ QLVDIRV DHL++G + SFAE G + Sbjct: 197 ERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + L +K L R+ A S + R++L+ ++ G ERE F++++L Sbjct: 68 VNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIFL 127 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + Q++++ H LF+G+++ EVHPRE+V+ A+ NA+AVILAHNHPSG PS+ADK IT Sbjct: 128 DAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLIT 187 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+++ Q +DIRV DHLI+G + SFAE G + Sbjct: 188 ERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 71/146 (48%), Positives = 95/146 (65%), Gaps = 2/146 (1%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 R ++ A +L++ G F T+ ++L+ K+AG E E F +L+L+ Q++LI Sbjct: 15 AYEHRVLEEAAEILEQRYVR-GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIE 73 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + LF G++ + V+PREV+K AL NAAAVI AHNHPSGD PSQAD+ ITQRL AL Sbjct: 74 FKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALS 133 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVDIRV DH++VG SFAE G L Sbjct: 134 LVDIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLER 58 +E + + P + + A+ L R R+ + + A ++ ++ L++ Sbjct: 68 LEVAELLSVPGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKK 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F+ L L+ +++++A +T GS+ ++ VHPRE+ +RA+ +A++++ HNHPSGD +P Sbjct: 128 EHFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D +T+RLV+A +++ I V DH+++G + S G L Sbjct: 188 SPEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 71/139 (51%), Positives = 93/139 (66%), Gaps = 3/139 (2%) Query: 22 KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A L +R++R G A T+ A +++++ K+ ERE F +L L+ QN+LI + LF G Sbjct: 22 HAAEILANRYVR--GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQG 79 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 ++ + V+PREVVK L NAAAVI AHNHPSGD+TPSQAD+ IT+RL L LVD+RV Sbjct: 80 TVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVL 139 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH IV G SFAE G L Sbjct: 140 DH-IVTGDTCTSFAERGWL 157 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 65/143 (45%), Positives = 94/143 (65%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 R +++A+ LL+ + + G +A RD+L+LK+ E F+ ++LN Q+Q++A E Sbjct: 24 DRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACEC 83 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF G++S V+PR VV+RAL NA+A+I +H HPSG PS AD+ IT RL L ++D Sbjct: 84 LFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMID 143 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 IRV DH I+G + YSFAE GLL Sbjct: 144 IRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + + L T+K A L +R R + T D++ M L +E F++L Sbjct: 70 KVKGIGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEHFVILL 129 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +N +I +F G+++S+ VHPRE+ A+ NA A+I HNHPSGD TPSQ D Sbjct: 130 LNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIIT 189 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T RL + ++ I + DH+I+G + S E G Sbjct: 190 TMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGYF 224 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 63/146 (43%), Positives = 87/146 (59%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 L + V+ A L R TS A D+ MA E E+F +LYL+++N LIA Sbjct: 118 LQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDRKNVLIA 177 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E G++ V+PRE+++RAL +A+A+IL HNHPSGD TPSQAD +T R+V A + Sbjct: 178 DEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNRIVAAAE 237 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++ I V DHLI+G + SF GLL Sbjct: 238 VMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 69/139 (49%), Positives = 97/139 (69%), Gaps = 3/139 (2%) Query: 22 KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A L +R++R G AF++ A +++L+ K+ ERE F +L L+ Q++LI + LF G Sbjct: 22 HAAEILANRYVR--GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQG 79 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 ++ + V+PREVVK L NAAAVI AHNHPSG++TPSQADK IT RL +AL L+D++V Sbjct: 80 TVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVL 139 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH++VG SFAE GL+ Sbjct: 140 DHIVVG-ETCVSFAERGLI 157 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 3/152 (1%) Query: 12 VLPLTAQRTVKRALTLLDRH--LRETGV-AFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + L +K L R+ +R G S + +D+L+ +++ ERE FM+++L+ Sbjct: 70 GIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREVFMVIFLDN 129 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 Q++++ H +F+G++ EVHPRE+V+ A+ NAAAVILAHNHPSG PS+ADK IT+R Sbjct: 130 QHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADKDITER 189 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++ Q +DI V DH I+G + SFAE G + Sbjct: 190 IIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 94/147 (63%), Gaps = 4/147 (2%) Query: 18 QRTVKRALTLLDRHLRE----TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 + A L+ R L E + + + +LKL + G ++E F++L+L+ Q++LI Sbjct: 59 AAIISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLI 118 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A E LF G+++ T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ +T L QAL Sbjct: 119 AAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQAL 178 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVD+R DH I+G SFAE GL+ Sbjct: 179 ALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 4/152 (2%) Query: 10 TPVLPLTAQRTVKRALTLL-DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 P+T + + A +L +++R+ AFTS+QA +D+L+ K+A E E F ++ L+ Sbjct: 10 ISDKPMTENQILDAAAEILACKYVRKD--AFTSSQATKDFLRFKLANKEHEIFAVMLLDN 67 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 Q+Q+I LF G+I ++ V+PREVVK L NAAAVIL HNHPSG +PS ADK IT+R Sbjct: 68 QHQMIDFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKR 127 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L +AL L+D+RV DH+I+G SFAE+GLL Sbjct: 128 LQEALALIDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 59/152 (38%), Positives = 94/152 (61%), Gaps = 3/152 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEFMMLYLNQ 68 + +K L + +L+E+ + + +++ D+L L M L+ E F +++L+ Sbjct: 160 GVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDS 219 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 NQ I E LF G+++++ V+PRE+VK A+ NAA++I HNHPSGD TPS +D+ IT+ Sbjct: 220 ANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITED 279 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+ A LV I V DH+I+G +SFA+ GLL Sbjct: 280 LIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 83/150 (55%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P P T++ A+ L R + + ++L K+ G ++E+F +LY +QQ Sbjct: 55 PDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQ 114 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 L+ + LF G++ + VHPRE+ + A+ + A++I+AHNHPSG TPS D +T+ L Sbjct: 115 NLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLK 174 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +++ I DH I+GG + S E L Sbjct: 175 KASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 1/145 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + + + A T+L++ L+ G S A D+L + A L E F +++L+ ++Q++A Sbjct: 43 MDEEGILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILA 101 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E LF G+I EVHPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +T+RL +AL Sbjct: 102 TEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALS 161 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGL 159 L+DIRV DHL++GGRQ S A G Sbjct: 162 LLDIRVLDHLVIGGRQHISLAARGW 186 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA--FTSTQAARDWLKLKMAGLEREEF 61 S + L + +K + L R L E F S + ++ K+ GL++E F Sbjct: 66 ISELKSFKGLGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEVF 125 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L L+ + +LI + G+++ + +HPREV K A+ +A AVIL HNHPSGD TPS+ Sbjct: 126 ITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQ 185 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L +A ++++I + DH+I+G + +S E G++ Sbjct: 186 DIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + ++ L R L E+ S A R +L+L +A L +E F+ L+L Sbjct: 71 IRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFL 130 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +N++IA E LF G+++ T V+PREV +RAL NAA+VI+AHNHPSG TPSQ+D +T Sbjct: 131 DTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMT 190 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + L +AL L+D+R+ DH +V G ++SFAEHG L Sbjct: 191 RMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + ++ A L R + + A +S Q +WL ++ ++E F+ Sbjct: 67 ELMEIDGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEHFL 126 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +++LNQ+NQ++A++TLF G+++S VHPRE+ K A+ A +I AHNHPSG+ S AD Sbjct: 127 VVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDAD 186 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ITQ++++ QLV I + DH++VGG + S E G + Sbjct: 187 IAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREE 60 S + + ++ L R R G +TS QA ++ +RE Sbjct: 68 TSELQAIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRER 127 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ L L+ +N+L+ + GS++++ VHPR+V + +AAAV+ HNHPSGD +PS+ Sbjct: 128 FIALLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSR 187 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ITQRL + +L+ +RV DH+I+G S A+ G+L Sbjct: 188 EDLDITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 64/156 (41%), Positives = 99/156 (63%), Gaps = 3/156 (1%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMML 64 L +T ++ + R+L++ ++ + + +L ++ ERE FM+L Sbjct: 66 CSVKGLGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREVFMVL 125 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 +L+ Q++LI E LF G+I+ + V+PRE++K ALY NAAA+ILAHNHPSG T PS +D+ Sbjct: 126 FLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQL 185 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT+++ A +L++I V DHLIVG YSFAE+ LL Sbjct: 186 ITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 62/158 (39%), Positives = 94/158 (59%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + L L + ++ A + R TS D+L+ MAGL REEF Sbjct: 66 QSQLHLAVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFW 125 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+L+++NQL++ E L GS+ V+PREV++RAL N +A+ILAHNHPSGD PSQ D Sbjct: 126 VLFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPD 185 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+ L++A + + I++ DH+IV G + SF +GL+ Sbjct: 186 IEMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 63/160 (39%), Positives = 96/160 (60%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREE 60 Q + + L + R L+E G F S Q+ +D+L+L + E Sbjct: 65 QQEFSSINGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEV 124 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L+ +++LIA E LF G+++ V+PRE+ KRAL+ NAAAVILAHNHP+G+T PS+ Sbjct: 125 FACFFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSE 184 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D +T+ L +AL ++D+ V DH+IVG +Y F EHG + Sbjct: 185 SDVILTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 90/147 (61%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 PL + +K A L + + +++L + +A RE F+ L+L+ QN+LI Sbjct: 25 PLDSDIVLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLI 84 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A+E LF G+I ++PREVVK AL NAA VI+AHNHPSGD PS D+ IT RL+QAL Sbjct: 85 AYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQAL 144 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV+I + DH +VGG Q+ S A G+ Sbjct: 145 MLVEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLEREEFMMLYL 66 + ++ A+ L R + + + F TS+Q L +M GL++E + +YL Sbjct: 76 IKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYL 135 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 N +N +I +T+F GS++ + HPRE+ + A+ +++A ++LAHNHPSG+ TPS D T Sbjct: 136 NTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFT 195 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+ + +++ I++ DH+I+G S E Sbjct: 196 KRMEECGEMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 61/137 (44%), Positives = 90/137 (65%), Gaps = 6/137 (4%) Query: 30 RHLRETGV-----AFTSTQAARDW-LKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 R +RE+ + A T A D+ K+ + EEF LYL+ +N++I E + G++ Sbjct: 29 RLVRESSITFIHPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTL 88 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +++ VHPREV K A NA +++LAHNHPSG+T PS ADK +T RLV+A +L+D++V DH Sbjct: 89 NASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDH 148 Query: 144 LIVGGRQIYSFAEHGLL 160 +IVG + YSF E GL+ Sbjct: 149 IIVGDKGYYSFRESGLI 165 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLERE 59 E + Q + + + A+ L R + V S + L +M L++E Sbjct: 72 EIEELQQIKGVGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKE 131 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F + LN ++++IA E + GS++++ VHPREV A+ +++A+IL HNHPSGD +PS Sbjct: 132 YFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPS 191 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RLV+A +L+ I V DH+I+G YS E ++ Sbjct: 192 GEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 QR +++AL LL+ L + A TS R + +L++ E F L+L Q+ I+ Sbjct: 33 PAQQRIIEKALALLESRLINSD-ALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAIS 91 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E F GSI V+PR +V+R L NAAAVIL HNHPSG + PS AD+ IT RL +AL+ Sbjct: 92 FEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALE 151 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+RV DHLIV SFA+ GLL Sbjct: 152 LIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREE 60 S + + P + +K A L +R + T TS + + ++ RE Sbjct: 82 ISELCEIPGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREH 141 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ + LN ++ L+ + + GS+++T VHPREV RA+ +A VIL HNHPSGD PSQ Sbjct: 142 FLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQ 201 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T RLV A L+ I + DH+I+G ++ YSF+ L Sbjct: 202 DDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 63/145 (43%), Positives = 94/145 (64%), Gaps = 1/145 (0%) Query: 16 TAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 R + +A ++ R+ + GV S R + +++A LE EEF ++ L+ QNQL+ Sbjct: 13 RETRILDQARDIISRYY-QRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLLHR 71 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 E LF G+++S VHPREV+KR L NAAAVIL HNHPSG+ PS+ D +T++L + L++ Sbjct: 72 EILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELLEI 131 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 +D+R+ DH IV G + S AE GL+ Sbjct: 132 LDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 94/149 (63%) Query: 12 VLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQ 71 L + + A+ +L+R L + G A TS Q A D+L+L M +RE F +++L+ ++ Sbjct: 17 TLTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHR 76 Query: 72 LIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQ 131 +IA E LF G I + R ++ RA+ N+ A+I+AHNHPSG+T PS AD+ +T L Sbjct: 77 VIAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAA 136 Query: 132 ALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+LVD+R+ DH I+G + +SFA+ GLL Sbjct: 137 LLRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + +K L R + G++F + D+ ++ E+E + + L Sbjct: 78 VKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQELLICMML 137 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +N L+ E +F G+++S+ +PRE+ A+ ++A ++L HNHPSGD TPSQAD T Sbjct: 138 DTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADVDFT 197 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QR+ +A +L+ I + DH+I+G + SF E G+ Sbjct: 198 QRVKEAGELLGIPLLDHIIIGDCKYLSFREQGIF 231 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 16 TAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 +R + A +++ R + S + ++LK + A LE E F M+ L+ Q+++I Sbjct: 20 REKRIIALAHSIIARRF-TRLDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINA 78 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 L G+I S V+PREVVK AL NAAAVILAHNHPSG PS+AD+ IT+RL AL L Sbjct: 79 VDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDL 138 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGL 159 VDIRV DH++V G SFA G Sbjct: 139 VDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTL---LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 I + + T+K AL L L R L S+ + + +M LERE Sbjct: 65 EEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREIV 123 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ L+ + +I TL G+ + +HPR+V + A+ NA+ VI+ HNHPSGD TPS+ Sbjct: 124 KVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKE 183 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ IT+RL QA +++ + + DH+IV R +SF E G L Sbjct: 184 DRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 4/155 (2%) Query: 9 QTPVLPLTAQRTVKRALTLLDRH--LRETGVA-FTSTQAARDWLKLKMAGLEREEFMMLY 65 Q + + AL L R R G +S L+ ++A L+RE F+++ Sbjct: 74 QVKGIGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDREHFVVVL 133 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +N++I T+ G++SS+ VHPREV K A+ +AA+V+LAHNHPSG PS+ D+ + Sbjct: 134 LNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDREV 193 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T R+ +A ++ I V DH+IVG +S EHG+L Sbjct: 194 TGRVAEAGGIIGIEVLDHVIVG-EGYFSMKEHGML 227 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 88/155 (56%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + P + + L L R + E S A + L +M ++E F+ LY Sbjct: 63 KAPGVGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLY 122 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +N++I+ +TLF G ++++ VHPR++ + A+ +AA+ I HNHPSGD TPS+ D + Sbjct: 123 LNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEV 182 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++R+V+A +L+ I DHL++G Q S + G + Sbjct: 183 SERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 168 bits (426), Expect = 7e-41, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLER 58 M + + + + L R H +ET + S A + L ++ + + Sbjct: 62 MTFQELITIKGIGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQ 121 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F++L LN +N ++ T+F GS++++ VHPREV K A+ +AAA+I+ HNHPSGD P Sbjct: 122 EHFIVLSLNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEP 181 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D T+RL++ ++ I V DH+I+G S E G+L Sbjct: 182 SYEDIEATKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + E S + + +T + V A + + ++ +S A D+ + MA +RE+ Sbjct: 94 LREVSGLGEA---AITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQ 150 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L+L+++NQLIA E G++ T V+PRE+VKRAL +A AVI+ HNHPSGD TPSQ Sbjct: 151 FRILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQ 210 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ +V + + + V DH+IVG S L Sbjct: 211 ADIQMTKTIVAIAEPLGVAVHDHIIVGKNGHASLKGLKLF 250 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 4/158 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH--LRETGVAFTSTQAARDWLKLKMAGLEREE 60 E+ P+T + L + V + +T+ D + +TS D + +E Sbjct: 10 EEVQAPKTRTIKLKTIKAVYQTITVNDTITDYLKPNTRYTSASQVFDTFTF-LRHETKEH 68 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ L+L+ +N+++ + + GS++ + VHPRE+ K AL +AAAVIL HNHP+GD TPS Sbjct: 69 FIALHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPTPST 128 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 D TIT+RL +A +L+ IRV DH+I+G YSF E G Sbjct: 129 EDLTITRRLQEAGELIGIRVLDHIIIGDN-YYSFTERG 165 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 3/163 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLE 57 + S + + + + L R + E S + + KM + Sbjct: 66 LANVSRLMKVHGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQK 125 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E+F+ L L+ +NQ++ E + GS++++ VHPREV K AL ++A+VI+ HNHPSGD + Sbjct: 126 KEKFITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPS 185 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D +T+++V+ +L+ I V DH+I+G + S + G + Sbjct: 186 PSREDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 69/154 (44%), Positives = 94/154 (61%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 L + + L L R + + F QA + +L+L +A E F +L+L Sbjct: 86 VKGLGPAKRAEIVAVLELARRAMAQRLQEREVFADPQAVKHYLQLHLAAKGHEVFAVLFL 145 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + QN+L+A E LF G+++ T V+PREVV RAL+ AAAV+LAHNHPSG PS+AD+ +T Sbjct: 146 DSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADEALT 205 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 Q L AL LVD+RV DH+IVG Q S AE GL+ Sbjct: 206 QTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 5/164 (3%) Query: 2 MEQSLIPQTPVLPLTAQR-----TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGL 56 M +L P+ P+ AQR + AL LLD+ + G + A +LKL++A Sbjct: 1 MNTALNLVDPLDPVLAQRAREDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPY 60 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 E F +L L+ ++++++ + LF GSI V+PR+VV +AL NAAAVI +HNHPSG + Sbjct: 61 HHEVFALLCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCS 120 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS AD+ +T RL +AL LV++RV DH+IVG S AE+G + Sbjct: 121 EPSGADRVLTTRLTEALALVEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 91/146 (62%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + + + A A T + A D+ K K+ G E E F +++LN Q +LIA Sbjct: 28 VASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLIA 87 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + +F G+++ V+PREVVK A+ +NAAAVILAH HPS +T PSQADK IT+RL +AL Sbjct: 88 YREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLKEALD 147 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+ V DH+IVGG S AE GL+ Sbjct: 148 LIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 62/125 (49%), Positives = 85/125 (68%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 +S A D+LKL MA ERE F +L+L+++NQLIA E L G++ V+PREVV+ Sbjct: 129 RCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREVVR 188 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 RAL +A+AVIL HNHPSGD TPS AD +T+++V A + + I V DH+IVG ++ SF Sbjct: 189 RALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVASFK 248 Query: 156 EHGLL 160 GL+ Sbjct: 249 ALGLI 253 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 90/146 (61%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + ++ V A T+L L A T+ +L++ +A + E F ++LN ++++++ Sbjct: 20 VKSEEIVSTAATILLNEL-TGREALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLS 78 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E LF+G+I V+PR VV++AL NAAAVI AHNHPSG PSQAD+TIT RL AL Sbjct: 79 FEPLFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALA 138 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+RV DH +V + S AE G L Sbjct: 139 LIDVRVLDHFVVSRSEWVSLAERGWL 164 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 75/150 (50%), Positives = 97/150 (64%), Gaps = 3/150 (2%) Query: 14 PLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P + A LL R++R G S + +DWL + AGLE E F++LYL+ Q Sbjct: 49 PHELAHKLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQ 108 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 LI E LF G+++ T V+PREVVK AL NAAAV+LAHNHPSG +PS AD+ +TQ L Sbjct: 109 VLIEAEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLK 168 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L +VD+RV DH IVGG ++ SFAE GLL Sbjct: 169 SSLMMVDVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 8/153 (5%) Query: 15 LTAQRTVKRALTLLDRH--LRETG-----VAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 +R V +++ R +RE FTS + + K + +E F+ L+L+ Sbjct: 17 PATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHLD 75 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +N+++ + + GS++ + VHPREV K AL NAAA+I H HPSGD PS D +IT+ Sbjct: 76 GKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSITK 135 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 RL +A +++ IRV DH++VG SF E GL+ Sbjct: 136 RLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 6/162 (3%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG----VAFTSTQAARDWLKLKMAGLER 58 ++ L+ + P A R + A L + L G + +K + L++ Sbjct: 72 KEELMTYPGIGPSMAARLM--AAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDK 129 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F L LN +N +I ET+ G+++S+ VHPRE+ K+A+ +AAAVIL HNHPSGD TP Sbjct: 130 EYFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTP 189 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D ++T+RL++A +++ I V DH+++G + S GL+ Sbjct: 190 SREDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEF 61 L+ + + +K ++ R L+ S + D+ MA RE+F Sbjct: 122 PLLQEVKGVGEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQF 181 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L+L+++N LIA E G++ T V+PRE+V+RAL ++ A+IL HNHPSGD TPS+A Sbjct: 182 RILFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRA 241 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+ ++ + + I V DH+I+G SF L+ Sbjct: 242 DIEMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 6/162 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL--RETGVAFTSTQ----AARDWLKLKMAGLER 58 + + + ++K A+ + R + + S + A R+ +M +R Sbjct: 74 EELTAEKGIGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMRHYDR 133 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F +LYL+++ LI + + G + S+ VHPREV K A+ +AA++IL HNHPSGD TP Sbjct: 134 EHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTP 193 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQ D IT+RL++A +++ I + DH+I+G S GL+ Sbjct: 194 SQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 2/144 (1%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 + + A +LD G AF A + +L L++A E+E F ++L+ QN+LI+ E Sbjct: 63 DKIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEK 121 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF G+I V+PRE+VKRAL NAAAVILAHNHPSG + PS AD +T+ + +L L+D Sbjct: 122 LFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALID 181 Query: 138 IRVPDHLIVG-GRQIYSFAEHGLL 160 +RV DH++VG SF E G + Sbjct: 182 VRVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 1/140 (0%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 + A T+L++ L+ G S A +L + A L E F +++L+ Q+ ++A E LF Sbjct: 20 ILLAAATILEQRLQRQG-RIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLF 78 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 +G+I E+HPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +TQRL +AL L+DIR Sbjct: 79 SGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIR 138 Query: 140 VPDHLIVGGRQIYSFAEHGL 159 V DHL++GG++ S A G Sbjct: 139 VLDHLVIGGQKSVSLAARGW 158 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 76/131 (58%) Query: 30 RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVH 89 R R+ + S D+ K + RE+F+++ LN +N++ T+F G+I+ + +H Sbjct: 20 RKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINMSPIH 79 Query: 90 PREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 PREV + A+ + A++ILAH HPS D TPS D+ T+R + +L+ I V DH+IV Sbjct: 80 PREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHIIVTES 139 Query: 150 QIYSFAEHGLL 160 +SF E+ L Sbjct: 140 SYFSFRENNLF 150 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 7/150 (4%) Query: 18 QRTVKRALTLLDRHLRETGV-------AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 Q + +A L + LRETG+ +F + A ++ ++++ ERE F +L+ + QN Sbjct: 8 QDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLFWDTQN 67 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LI E LF G+I+ +HPRE+VK+AL N++AVIL HNHPSG TPSQ+DK T ++ Sbjct: 68 RLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKIK 127 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QA QL+D+ V DH+IV YSF H L+ Sbjct: 128 QACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 6/160 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREE 60 +L V + A + + +T L R + ++ G FTS QA D+ L++E Sbjct: 73 ALCDIKGVGKVKAVQI--QCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQER 130 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +L + + +L++ +T+ G+++ + V PRE+ AL A VIL HNHPSG+ PS Sbjct: 131 VFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSP 190 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T R+ ++ +L++I + DH+I+G R+ +SF E G + Sbjct: 191 EDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 66/150 (44%), Positives = 103/150 (68%), Gaps = 3/150 (2%) Query: 12 VLPLTAQRTVKRALTLLD-RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 L +++A ++++ R++R G ST+A R++LK K+A LE E F +L L+ Q+ Sbjct: 5 TLSCHEDLILQQAQSIIENRYIR--GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQH 62 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +++A+E LF G++++ ++PRE+VK +L +NA A+IL HNHPSG+ PS ADK IT +L Sbjct: 63 RILAYEELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLK 122 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L L+D++V DHLIV G Q+ S AE GL+ Sbjct: 123 SVLGLLDVQVLDHLIVAGTQVVSLAERGLV 152 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 1/151 (0%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 TP + L Q + L+ L+ + V +S QA +L++ +A RE+F +L+L+++ Sbjct: 95 TPDIALDLQLMFEATRRLMAEPLKRSTV-ISSWQALLSYLRVTLAHEPREQFRLLFLDKK 153 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 NQLIA E + G++ +PRE+++RAL +A++VIL HNHPSGD PSQ D +T+ Sbjct: 154 NQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKAN 213 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + A + + I + DHLIVG + S + G + Sbjct: 214 IAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEF 61 + Q + +K AL + R L G S A ++++M+ L++E+ Sbjct: 71 EELAQRRGMGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQL 130 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L+ +N++ +T++ GS+ ++ V E+ K + N+A++I+ HNHPSGD TPS Sbjct: 131 RAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPE 190 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 D +T+++++A +L+DI V DHL++G + S E GL Sbjct: 191 DVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 1/153 (0%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLR-ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 Q LP ++ ++ L L+ + + E + + + GL++E FM+L LN Sbjct: 10 QLNALPPRRRKQAEKLLELIRKVMEGEKDHYIHTPADVFQAVATDLVGLDKEHFMILILN 69 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +N++++ E + G+++S VHPREV K A+ AA++I HNHPSGD PS DK +T+ Sbjct: 70 TKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKLTE 129 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 RL+QA +++ I V DH+++G S E G++ Sbjct: 130 RLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQ---RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLERE 59 E + + A R VK L + + T D+ K + GL+ E Sbjct: 146 ELEELTAVRGISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDE 205 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +LYL+ QN++IA ET+ G ++ V+PR+V++RAL ++A+IL HNHPSG PS Sbjct: 206 NFCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPS 265 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ + +L+DI V DHLI+G + +SF E G++ Sbjct: 266 DADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 1/147 (0%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 P+T + + A L L + G + +A +L+ M E E F L+L+ Q+++I Sbjct: 20 PVTEKDILIMARRLAKNRLAK-GCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRII 78 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 E LF G+++ T +HPREVVKRAL NAAAVI HNHPSG+ PS+ADK IT +L + L Sbjct: 79 CFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETL 138 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+RV DH++VG + S AE GL+ Sbjct: 139 NLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 6/160 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA----FTSTQAARDWLKLKMAGLEREE 60 LI + + A + V L+ L + L T F+S + D+ M RE Sbjct: 74 ELIQIKGIGKVKAIQLV--CLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREI 131 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +++LN + +LI + G+I S V PRE+ A NA +IL HNHP GD TPS+ Sbjct: 132 LKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSR 191 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+R+ +A +L+ IR+ DH+++G S E G Sbjct: 192 EDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 92/155 (59%), Gaps = 6/155 (3%) Query: 12 VLPLTAQRTVKRALTLLDRHLR------ETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 +P + KR +++ H R E + S ++ + ++ +E F + Sbjct: 58 DIPGVGPQKYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVAL 117 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN Q++ + ++ LF+G+I++ V+PRE+VK AL +NAA VILAHNHPSG PSQAD I Sbjct: 118 LNNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAI 177 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TQR+ QAL L+D++V DH++VG S A+ G L Sbjct: 178 TQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHL--RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + L P + + +L + R +E T D L M+ L+ E F Sbjct: 66 EELKNDNPGMTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHF 125 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ LN +N +I E + G+I+++ VH REV + A+ NA ++ILAHNHPSGD+TPS Sbjct: 126 KVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIE 185 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T+RL A +L+ I+V DH+I+G +SF E +L Sbjct: 186 DEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 86/156 (55%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 +L P A R V A L R + ++ QA D+L + MA L E +L Sbjct: 90 ALHPNMGETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVL 149 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 YLN QN LI + G++ + ++ REV+++A+ AAA+IL HNHPSG PS+AD Sbjct: 150 YLNSQNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQ 209 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ++++A +L+ + V DH+++G S GL+ Sbjct: 210 VTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 3/134 (2%) Query: 30 RHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISST 86 R LR VA + + +L +A + E+F +L+L+ +NQLIA E L G+++ Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 87 EVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 V+PREVVKRAL +A A+I+ HNHPSGD TPS D +T+ L +A +L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 147 GGRQIYSFAEHGLL 160 G SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 5/145 (3%) Query: 16 TAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 + V+RA+ +L+R + G S + R +L+L++ G E F ++L+ Q Sbjct: 63 DEDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----W 117 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 LF G++++ ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L AL L Sbjct: 118 RALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNL 177 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 VDI + DH ++G + +SF + LL Sbjct: 178 VDIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 8/163 (4%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLE 57 ++E + P+TP A + A+ +L R E S R +L+ G Sbjct: 39 VVELAREPRTP-----AWDALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKP 93 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 E F++LYL+ QN+LI E F G+++ T V+PRE+++R+L +AA VI +H HPSG Sbjct: 94 YEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCE 153 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS AD+ +T L AL LVD+RV DH++V G + SFAE G L Sbjct: 154 PSSADEVLTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 4/155 (2%) Query: 10 TPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + TV A+ L R H ++ F+ +A + K+ ++E F++ + Sbjct: 73 VKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIVCF 132 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +N+L+ ++ + GS+ + V +E ++ AL F A +IL HNHPSG PS AD + Sbjct: 133 LNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADINL 192 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T++ +A DIR+ DH+I+G + S ++GL+ Sbjct: 193 TRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 89/143 (62%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 R VK L +++ + + ++ A +++ +M L++E F+ L+L+ ++++I ET Sbjct: 62 IRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKET 121 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 +F GS++S+ PRE+++ AL ++AA +I HNH SGD+ PS D +T+RL +A L+ Sbjct: 122 IFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLMG 181 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 + + DH+++G + S E+ LL Sbjct: 182 VELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLL----DRHLRETGVAFTSTQAARDWLKLKMAGLER 58 E + + V L L +R L + TS++ D + +++ L++ Sbjct: 67 EVKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKK 126 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + L+ +N +IA E + G + ST V+PREV K A+ +A ++IL HNHPSG+ P Sbjct: 127 EYFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKP 186 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D IT RL +A ++DI+V DH+++G YSF + G L Sbjct: 187 STEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 1/144 (0%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 Q ++ A +L L + GV S RD+L++ +A + E F LYL+ ++++I Sbjct: 29 KQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIETV 87 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G+I V+PR VV++AL NAAAV+ HNHPSG PS AD+ IT+RL +AL LV Sbjct: 88 ELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALALV 147 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 DIRV DH +V + SFAE GLL Sbjct: 148 DIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 9/162 (5%) Query: 2 MEQSLIPQT-PVLPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGLER 58 ME + I + + T+ A L R LRE + + + D+L M E+ Sbjct: 66 MEAAEIANICKGIGMAKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEK 125 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E ++L L+ + +LI + +G+++ + HPR++++ + NA ILAHNHPSG+ P Sbjct: 126 ETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAP 185 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGG------RQIYSF 154 S+ D +T+R+ + +L+ +R DH+I+G + YS+ Sbjct: 186 SRTDDLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 4/160 (2%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 + L V P A + V A + R + + + + L+RE Sbjct: 86 KELTRVAGVGPAKAVQLV-AAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKREV 144 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++ LN N +IA T+ G ++++ V PR V +RA+ NAA +I HNHPSG+ PS Sbjct: 145 FKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSA 204 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++LV+A +L+ I V DH+I+ G S AE GL+ Sbjct: 205 EDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + L + + L L R L + F + A + +L+L +A E F +L+ Sbjct: 80 RIKGLGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKPHEVFAVLF 139 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ QN+L+A E LF G+++ T V+PREVV RAL+ A++V+LAHNHPSG PS+AD+ + Sbjct: 140 LDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADEML 199 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TQ L L L+D+RV DH+IV + S AE GLL Sbjct: 200 TQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 161 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 85/152 (55%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + PV + + + + + S + A LK + +RE+F+++ L+ Sbjct: 18 EVPVKQPAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDT 77 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 +NQ A GS++S+ VHPREV K A+ N+A++I+AHNHPS D TPS+ D +T+R Sbjct: 78 KNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKR 137 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV+A ++V I + DHLIV + S E G + Sbjct: 138 LVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 6/152 (3%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGV----AFTSTQAARDWLKLKMAGLEREEFMMLY 65 L T+ AL L R ++E V TS + + + M +E +++ Sbjct: 67 IKGLGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYC-IDMQSYPQEIVRVIF 125 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ + ++I + + G+I+S+ HPR++ + A+ ++ +ILAHNHPSGD TPS+ D + Sbjct: 126 LDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIEL 185 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 T+++ +A +L+ I + DH+I+G + YS + Sbjct: 186 TKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 2/153 (1%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 Q Q V A +L RHL + V TS QA D+ L + G + E F +LYL+ Sbjct: 12 AQPHRFSAQEQAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLYLD 69 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 ++N+LI+ E L G++ V+PREV++R L NA+A+I+ HNHP+GD PS AD +T+ Sbjct: 70 RRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTK 129 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + A + + + DH+I G + S G L Sbjct: 130 EIRNASASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 4/159 (2%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 + +T + + A R ++ + T D + L++E F Sbjct: 74 ELTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEVF 133 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +++LN N +I T+ G +SS+ V PR V ++A+ +AAAVI HNHPSG+ PS+ Sbjct: 134 KVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSRE 193 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L +A + I V DHLI+ G + S AE G++ Sbjct: 194 DIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 P A+ + + R S + + ++ E EEF M + Sbjct: 75 VPGFGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEFWMALV 134 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +N+L+ E + G++ V+PREV+ AL +NA+ VIL HNHP D PS D T Sbjct: 135 DTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFT 194 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+V A + +DIRV DHL+V + +SF G++ Sbjct: 195 RRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREE 60 +S + L ++ L + R+L+E G A TS + +L KM L E Sbjct: 66 ESDFCEKKGLGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEV 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F + L+ Q+++I F GSI VHPR + ++ L NAAA+IL HNHPSGD + S+ Sbjct: 126 FAAILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASE 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ADK ITQ++V ALQL+D+RV DHL+VG ++ SFAE+G + Sbjct: 186 ADKMITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFT--STQAARDWLKLKMAGLEREEF 61 + + + P L + +K L L + T S + K +A E E Sbjct: 32 EKELLRVPGLGPRKAKQLKAVFDLSKALLEPDDTSITIQSPADVFENFKY-LALHEEEYL 90 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L+LN +N+++ H T+ G+++++ +HPREV A+ A+V++ HNHPSGD TPS+ Sbjct: 91 VALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSRE 150 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RL +A +++ I + DH+++G + S E LL Sbjct: 151 DIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 86/146 (58%), Gaps = 3/146 (2%) Query: 18 QRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + R +TLL R + F S+ +L + G+E+E+ +++YL+ +N+++ Sbjct: 62 DELLSRTITLLKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLG 121 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 LF G+++ + VHPR++ + A+++N+ +++AHNHPSGD PSQ D T+++ +A Sbjct: 122 ERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASD 181 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+ I DH+IV R SF E L+ Sbjct: 182 LMGINFLDHIIVADRSYLSFKEEQLI 207 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%) Query: 12 VLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQ 71 + L + A+ R L + G+ + + ++ ++E F+ L L+ + Sbjct: 72 GVGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLK-ITEELKDKKQEYFLSLTLDGASN 130 Query: 72 LIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQ 131 LI T+F G+++ + VHPRE+ A+ AA +I HNHPSGD+ PS+ D IT+RLV+ Sbjct: 131 LIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVE 190 Query: 132 ALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++ I V DH+I+ YSF G+L Sbjct: 191 IGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 +++ + L +K L + RH + G A T + L+ + RE Sbjct: 64 DEAAFCEAKGLGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSRE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++ L+QQNQ I LF G+I+ VH REV+K L +AAAVILAHNHPSGD TPS Sbjct: 124 IFGLVLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGG-RQIYSFAEHGLL 160 Q+D+ +T ++ Q LQL++ R DH+I+G + YSF + G+L Sbjct: 184 QSDRDLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 4/156 (2%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P P T+ A +L RH R T V S D+L L E F +L L+ Sbjct: 12 PPAPGFSEAEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLD 70 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 ++N+LI + + GSI V+ EV++ AL +A+A+IL HNHPSGD PSQAD +T+ Sbjct: 71 RKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTR 130 Query: 128 RLVQALQLVDIRVPDHLIVGGRQ---IYSFAEHGLL 160 ++V A +++DI + DHLIVG + +S G+L Sbjct: 131 KIVDACRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 3/160 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + E + L + R F+S + K MA RE+ Sbjct: 109 LQEIEGCGPASAIDLK---IISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQ 165 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L+L++++ L++ E G+I T V+PREVV RAL +A+ +IL HNHPSGD +PSQ Sbjct: 166 FRILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQ 225 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ++T RL +DI + DHLI+ SF L+ Sbjct: 226 EDISMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 73/127 (57%) Query: 34 ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 E + F + ++L+ K+ ++E+ ++LYLN +NQL + G ++ V P ++ Sbjct: 100 ENKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDI 159 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS 153 + A+ A AVI+AHNHPSGD TPS+ D T R+ +A +++ I++ DH+I+G + S Sbjct: 160 FREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHIILGENKYIS 219 Query: 154 FAEHGLL 160 L Sbjct: 220 MKAERLF 226 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 5/142 (3%) Query: 24 ALTLLDRHLR-----ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 AL L R R + + S + +M+ L++E +++LN +N +I + + Sbjct: 88 ALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILKVIFLNTKNIVIGTKDV 147 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F GS++++ VHPRE+ K A+ ++ +I+ HNHPSGD TPS+ D IT R+ + +++ I Sbjct: 148 FKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINITLRIKECGEIMGI 207 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 ++ DH+I+G S E G + Sbjct: 208 QLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 2/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG--VAFTSTQAARDWLKLKMAGLERE 59 M + + Q + + ++ L R ++ + +W K + + +E Sbjct: 63 MHVNTLMQIQGIREVKALQLLASVELSKRVIKSKVYHAPILKPEDVIEWFKFEYGTMSQE 122 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ LYL+ +++LI+H LF G+++ + VHPREV K A NA +V++AHNHPSGD TPS Sbjct: 123 CFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPS 182 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AD +T ++V + + + DH+IV Q YSF EH L Sbjct: 183 KADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 82/157 (52%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 Q++ L Q + A + +R +RE +F S + + K ++ L EE + Sbjct: 73 QAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHV 132 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+L+ + QL+ L GS +++ + RE+ AL + IL HNHPSGD PS+ D+ Sbjct: 133 LFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDE 192 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+ + +A + + I + DH+I+G Q YSF E G + Sbjct: 193 RATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLER 58 M S + Q + + L L R ++ F++ + + M LE+ Sbjct: 68 MSVSELMQIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEK 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E +++ L+ + +LI + L G+ + + V RE+ K AL AA+V+L HNHPSG+ +P Sbjct: 128 EHLVLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T+ +++A +++ I + DH+++G +SF + + Sbjct: 188 SREDMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 3/153 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + +K +L R L + +S+ AA LK + GL EEF +LYL+ Sbjct: 79 KGVGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLTYEEFWVLYLD 138 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 N LI L G ++T V R V+++A+ + A A+I+AHNHP+G+ PS +DK +TQ Sbjct: 139 NSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDKALTQ 198 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L +A +++DI++ DH+IVG + +SFA+ LL Sbjct: 199 KLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 89/144 (61%), Gaps = 1/144 (0%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 + + A ++++ +R T A TS A + ++ ERE F +L L+ Q++LI Sbjct: 23 EKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKFV 81 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 GSISS V+PREV+K L++NAAAVI AHNHPSG PS AD+ IT RL AL+L+ Sbjct: 82 EHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELI 141 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 D++V DH ++G + SFA+ G + Sbjct: 142 DVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLER 58 M S + + + ++ AL L R E TS++ A ++ + L Sbjct: 68 MSVSQLIKFKGIGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPH 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +L+LN N++I+ L G I+ T V R V K L A +IL HNHPSG+ P Sbjct: 128 EEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQADK IT+++ A +++D+++ DHLI+ + YSF + G+ Sbjct: 188 SQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 7/162 (4%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + + A L R RET S + D L +M L RE + Sbjct: 70 ELSKIKGVGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRESLRL 129 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + L+ + LI E + GS++ + HPREV + AL ++A AVIL HNHPSGD TPS AD Sbjct: 130 VLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADH 189 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQ-----IYSFAEHGLL 160 +T+RLVQ +L+ IR+ DH+I+G +SF E G++ Sbjct: 190 QLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREE 60 + + + + R E A +S ++ L +EE Sbjct: 66 EEQLKKFKGIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEE 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F + +N +N++I E L G++ T V+PREVV AL NA+ VIL HNHP GD +PS Sbjct: 126 FWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSP 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T + Q ++IR+ DH+IV + +SF E G L Sbjct: 186 EDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + L +K A L R E + + + + ++E F Sbjct: 70 EELSKLKGIGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKEYF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L L+ +++LI + GS+ + VHPREV K AL +AA+VILAHNHPSGDT PS Sbjct: 130 FCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHD 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ++ RL +A ++ I V DH+I+GG+ S GLL Sbjct: 190 DIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 73/127 (57%) Query: 34 ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 +G + ++ EEF +++ +N++IA E + G++ +T V PRE+ Sbjct: 101 RSGAPLSDPAEVARAAMARIGSKGVEEFWAAFMDSKNRVIAWEQVSKGTVDATPVFPREI 160 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS 153 + AL AAA+ILAHNHP GD TPS+ D +T+R+ Q + IR+ DH+IV + YS Sbjct: 161 MVTALRLEAAALILAHNHPGGDPTPSREDLDLTRRIRDTAQGLGIRILDHIIVTDHEYYS 220 Query: 154 FAEHGLL 160 F EHG L Sbjct: 221 FNEHGRL 227 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 Q + ++R A + + F S + + ++ E+E + + L+ Sbjct: 88 QLKCIGELSKRIASTAARI--------SLDFNSPDSIAAYYMEQLRHQEQEIMICMMLDN 139 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 QN L+ L G++++T + PREV AL ++A +IL HNHP G+ PS+ DK IT+R Sbjct: 140 QNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDKEITER 199 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + QA +++ I + DH+I+G + SF E GL+ Sbjct: 200 ICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 158 bits (400), Expect = 7e-38, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEF 61 + P L T+ L L R E A + + + + K +A E Sbjct: 67 QELMSLPGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEHC 126 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + LYL+ Q LI L G+++ V+PREVV+ AL +AAA+ILAHNHPSG PSQA Sbjct: 127 LALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQA 186 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ T+ + QAL LV+IR+ DHLIV G + S AE GLL Sbjct: 187 DRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEFM 62 + Q + + L R E + A WL ++ G ++E F+ Sbjct: 70 ELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEHFL 129 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +YL+ +N ++ H LF G++ ++ VHPREV K AL +A V++ HNHPS D TPS AD Sbjct: 130 AIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLAD 189 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + ITQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 190 RIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 6/160 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV----AFTSTQAARDWLKLKMAGLEREE 60 L + P+ A +A+ L R ++ S+Q + +AG +E+ Sbjct: 65 QLRQIEGIGPVKAIEL--QAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQ 122 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 + +YL+ +NQ+I + L+ G+++S+ HPREV K A+ ++AA IL HNHPSG PS Sbjct: 123 LLAVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPST 182 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+R+V QL+ I DHLI+G Q S E G L Sbjct: 183 QDINFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 157 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 9/163 (5%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + +K A TL R L+ G + +A D L+ + E E F + Sbjct: 81 LCKVKGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQV 140 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + LN + +LI E + G++ + +HPREV K A+ NA+A++LAHNHPSGD TPS+AD Sbjct: 141 VLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADI 200 Query: 124 TITQRLVQALQLVDIRVPDHLIVGG------RQIYSFAEHGLL 160 +T+ L++A QL+ I + DH+I+G + S E G Sbjct: 201 KVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGYF 243 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 68/120 (56%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 + + +L + L RE F +L N +N L+ + G++++ V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 A +++LAHNHPSGD PS D +T+ LV QL++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKM---AGLEREEFMML 64 P+T P +V R + D+ ++ + + + A+ +K + +RE+F +L Sbjct: 22 PKTNTKPSKKFISVYRVSLVRDKGIKFGRESLSGPKQAQKIMKSLIEMQGQPDREQFCIL 81 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 LN +N++I + GS+SS VHPREV+K A+ N++A+IL HNHPSG TPS D Sbjct: 82 MLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDIA 141 Query: 125 ITQRLVQALQLVDIRVPDHLIVG--GRQIYSFAEHGLL 160 IT+R++QA ++ I V +HLI+ YSF+E+GL+ Sbjct: 142 ITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 1/153 (0%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRH-LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 Q+ Q ++ A ++ R+ + + + + + +A ++RE F L+L Sbjct: 71 TQSSSFSAHDQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHLAHVDREVFGALWL 130 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + + + LFAGS++ VH REV++ L NAAAVI HNHPSGD +PSQAD+ +T Sbjct: 131 DNGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLT 190 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 L L ++IRV DH++V + SFAE G Sbjct: 191 NHLKDVLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + + + L R + + F + + D+ + E E +++ L Sbjct: 89 IRGIGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERLVLVML 148 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + + +LI E + G+++++ V PRE+ AL A +++ HNHPSGD PS D IT Sbjct: 149 DTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDIAIT 208 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+ A +++ I + DH+I+G + S E GL+ Sbjct: 209 RRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 76/125 (60%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G+ +T + ++ M L+ E+ +L + +++L+ E + G+++++ + PREV Sbjct: 107 GIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFL 166 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 A+ + A +IL HNHPSGD TPS+ D +T+R+ +A +L+ + + DH+I+G + S Sbjct: 167 LAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLK 226 Query: 156 EHGLL 160 E G++ Sbjct: 227 EQGII 231 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 5/148 (3%) Query: 18 QRTVKRALTLLDRHLRETG-----VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 Q +++A +L + + E FT A+ + + + ERE F++L+L++ ++L Sbjct: 9 QAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRL 68 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I E +F GS+S T V RE++++AL NA+A+I+ HNHP+G+ PS ADK IT+RL +A Sbjct: 69 IKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEA 128 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L+DI++ DH IV G + F ++ L+ Sbjct: 129 CELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 74/126 (58%) Query: 35 TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVV 94 F +++ A D+ ++ LE E FM+L LN + +LI + L G+++ T + REV Sbjct: 102 KRTVFNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYTCITSREVY 161 Query: 95 KRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 + AL A +I+ HNHPSGD TPS+ D T++L +A +LV I + DH+I+G + S Sbjct: 162 RYALSKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIIIGDNRYISL 221 Query: 155 AEHGLL 160 E ++ Sbjct: 222 KEQDMI 227 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + Q L + + A+ L R+L + S + LK ++E F+ Sbjct: 64 NIEKLLQIHELGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFI 122 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 YL+ N++ + G+++ + VHPREV A+ A++I+AHNHPS + TPS+ D Sbjct: 123 AFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSRED 182 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ+L Q+ +++ I + DH+I S E G+L Sbjct: 183 ILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + ALTL +R TS + A ++ M LE E F + Sbjct: 79 LTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEVFRI 138 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + LN + ++ + G I+ T VHPREV ++A+ A ++IL HNHP+GD +PSQ D+ Sbjct: 139 IILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDR 198 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+RLV+ ++V I + DH+I+G +SF + G+L Sbjct: 199 NLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 5/155 (3%) Query: 10 TPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 LP + + A R LR +G+ STQ +L+ M +RE+ +L+ Sbjct: 96 IKALPEAVRVLLMLAREAGLRIQRARLRRSGILADSTQ-LYAYLRAVMGPEKREQVRVLF 154 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +++L+A + + G++ T V+PRE+V RAL NA ++L HNHPSGD TPS D + Sbjct: 155 LNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVM 214 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T ++ A ++++I V DH+IV G ++ S E G L Sbjct: 215 TTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 S + + L + + L R R S + D L ++ ++E F Sbjct: 73 SALSSLSGMGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKKESF 132 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L L+Q+++L + GS+S T VHPRE + A+ +AAAV+ HNHPSGD PS Sbjct: 133 WVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSD 192 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ++T+RL + +L+ IRV DH+++G S E G L Sbjct: 193 DWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 79/133 (59%), Gaps = 1/133 (0%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 ++ S + A +K + ++E F++L L+ ++QLI+ + ++ G+I + Sbjct: 97 INSMFMPEVECLRSPEDAYHAVKY-LTNEDQETFVVLALDTKHQLISRKEIYKGTIDAAI 155 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 VHPREV + AL +AA +I+AH HPSG+ +PS+ D +T+RL + + + I + DH+IVG Sbjct: 156 VHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKRLRKVGEEIGIPLSDHIIVG 215 Query: 148 GRQIYSFAEHGLL 160 + +S + G L Sbjct: 216 RNKYFSMKKQGHL 228 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 4/161 (2%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLR--ETGVAFTSTQAARDWLKLKMAGLERE 59 + + L L VK AL L + + ++ ++ + Q A ++LK K RE Sbjct: 73 KSVEELLKVRGLGLVKALQVK-ALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRE 130 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 + LYL+ N+L+ E + G++++ P++++ +A+ +A +I+AHNHP G+ +PS Sbjct: 131 SLIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPS 190 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+RL +A +L+ + DHLI+ + +SF E G+L Sbjct: 191 NEDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 T AAR L+ ++A RE F +LN N +IA E LF G+ISS VHPR V++RAL Sbjct: 28 ITGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRAL 87 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + NAAAV+LAHNHPS +TTPSQADK IT+RL Q L +VD++V DHLIVGG IYSFAEHG Sbjct: 88 HHNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHG 147 Query: 159 LL 160 L+ Sbjct: 148 LI 149 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + +K + DR+L + + ++ +L + RE F Sbjct: 109 EELCRVNGVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVF 168 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + ++L+ +N+++A E LF GS+SS+ V+PREV+ +AL AAA+I AHNHPSG+T+PS Sbjct: 169 VGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPE 228 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RL AL I V +HLI GG + YSFA+ G++ Sbjct: 229 DLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLER 58 E + + + + +L R L + S + A +++K ++ +R Sbjct: 65 EVEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDR 124 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + LN +N++I+ E + G +SS+ V+PREV K A+ +A ++ILAHNHPSG+ +P Sbjct: 125 EYFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSP 184 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+AD IT RL+ A +++DI V DHLI+G S + + Sbjct: 185 SKADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Query: 17 AQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 ++ +R+ + G+ S+ +++ K+ ++E + + L+ +NQ++ Sbjct: 77 KVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIGDSKQELLVCVCLDTKNQVL 136 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + + +F G+++S VHPRE+ K AL F+ A +++AHNHPSG+ PS+ D +T+RL+ A Sbjct: 137 SEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQLTKRLINAG 196 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++ I + DH+IVG S AE ++ Sbjct: 197 KMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 4/148 (2%) Query: 17 AQRTVKRALTLLDRHL----RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 A T+ LL + RE +F S+ +L ++G +E M +Y++ +N++ Sbjct: 58 APETLSLGAELLLNRVKAIKREKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKI 117 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 IA + +F G+++ +HPR++ + A+ +NAA LAHNHPS D TPS+ D +T+++ Sbjct: 118 IAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSV 177 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + + IR DH IV SF E LL Sbjct: 178 SECMGIRFLDHFIVNTGNYLSFKEMELL 205 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 155 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 80/103 (77%), Positives = 92/103 (89%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 R EF +LYLN QN+LIA ETLF G+I+ TEVHPREV+KRALY NAAAV+LAHNHPSG+ T Sbjct: 158 RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 217 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+AD+ IT+RLVQAL LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 218 PSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 80/141 (56%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 ++ A L R G + A +L+ +A E+F +L+L++ +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G+I T V+PREV++RA+ A+ +IL HNHP + TPS+ D +T+RL Q ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 4/148 (2%) Query: 13 LPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 + + Q ++R + ++ + + S+ ++ K+ G +EE +YL+ +N++ Sbjct: 63 IAVVLQLMLERVKGVNNKEI----ESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKI 118 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 IA + +F G+++ HPR++ + A+ +N+ A +AHNHPSGD PSQ D T++LV+A Sbjct: 119 IAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEA 178 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + + I DH IV SF E LL Sbjct: 179 SKCMGIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 2/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLR--ETGVAFTSTQAARDWLKLKMAGLERE 59 M + + P + TV AL L R L + RE Sbjct: 65 MPAAEFARIPGIGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERRE 124 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +L L+ +N+++ + G++++T VHPREV + A+ +AA +I+AHNHPSGD PS Sbjct: 125 HFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPS 184 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+ L +A L+ I V DH+IV +SFAE GLL Sbjct: 185 AEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 ++ I + + LT R V R L + E V + Q D+L M GL++E Sbjct: 86 LLSIKGIGEVNSMALTLIREVSR--RYLKDGIMEKPVC-NTAQQVFDYLYCAMRGLKKEV 142 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++YL+ Q++++ LF G+++S + PREV+ A+ NA+A+I HNHPSG PSQ Sbjct: 143 FKVIYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQ 202 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ADK +T+ LV A ++ IR DH+I+G +SFA G++ Sbjct: 203 ADKDVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 4/162 (2%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLE 57 + Q LI Q P + + ++ R DWLK ++ Sbjct: 62 LSRQELI-QIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSL 120 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E+F++++L ++++++ LF G+I+++ V PRE+ K AL N+ +IL HNHPSG+ + Sbjct: 121 QEKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLS 180 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 PSQ D ++T+R+ +A QL+ ++V DH+IV +SF + G+ Sbjct: 181 PSQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 83/128 (64%) Query: 33 RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 R + + ++LK+ ++ EEF +L+LN N+LIA +TLF G+I + V+PR Sbjct: 27 RRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYPRV 86 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 V++ L +N+A VILAHNHPSG+ PS+ D +T+ L + L+ +++ V DH+I+G + + Sbjct: 87 VLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDEYF 146 Query: 153 SFAEHGLL 160 SF E GL+ Sbjct: 147 SFREEGLI 154 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + + +K L R + V T+ + D+ + +E ++ Sbjct: 87 KIRGIGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLIVCM 146 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 + + + + L GS + T V PREV + A+ +AA +IL HNHPSG PS AD + Sbjct: 147 FDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDVV 206 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+R++ QL+ I + DH+I+G +S+ E+ + Sbjct: 207 TKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLERE 59 + + + + + + R+L + + +AA +++K G + E Sbjct: 67 HPKELQKVKGVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++ L+ Q +I LF G++ V+PR+VV+ + +NA++VILAHNHP G PS Sbjct: 127 VFYVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D TQ++V AL + + V DH IV + YSFA++G+L Sbjct: 187 MDDIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLERE 59 + + + + T+ A L R E Q + + ++ E Sbjct: 67 DIQSLCRYAGIGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 EF ++LN++ QL++ + G ++ T V R + +AL A A+ + HNHPSG+ PS Sbjct: 127 EFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QAD +TQ++ QA +L+DIR+ DH+IV + YS+ E G L Sbjct: 187 QADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 3/153 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + T+ A + R E + + ++ + L EEF Sbjct: 67 AQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPHEEF 126 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +LYLN N++I L +G I+ T V R + K AL A ++IL HNHPSG TTPS+ Sbjct: 127 WVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSKE 186 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 D +T+R+ A +DI++ DH+IV ++ YS Sbjct: 187 DLELTERVRNAGDTLDIKLLDHIIVTEKEYYSI 219 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 4/156 (2%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMML 64 + P + +T +K ++ L R E G + ++ A K M L+ E + Sbjct: 73 KYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCI 132 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 Y++ +N+ ++ + G ++ PR++ K AL N+A +ILAHNHPSGD TPS+ D Sbjct: 133 YMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVI 192 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL++A +++ I V DHLI+ S E + Sbjct: 193 FTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 AFTS + + L + +E FM L+L+ +N+L+ + + GS+S++ VHPREV K Sbjct: 45 EAFTSPRKVAEMLAF-LKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKS 103 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 AL +AA ++L HNHPSG T PS D+ +T RLV+A +++ I V DH+I+G +SFAE Sbjct: 104 ALLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILG-DGFFSFAE 162 Query: 157 HGLL 160 GLL Sbjct: 163 QGLL 166 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 85/142 (59%), Gaps = 4/142 (2%) Query: 23 RALTLLDRHLR----ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 +A LL++ + ++ A +++ + E+F +L+L+ +NQLIA E Sbjct: 131 QATHLLNQRCSLEEVKARPIISNWGALLSHVRIALQHETEEQFRVLFLDHKNQLIADERQ 190 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 G+I+ V+PRE+ KRAL +A+A+IL HNHPSGD TPS+AD +T+ ++ A + ++I Sbjct: 191 SQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADIDVTREIMDAFEPLEI 250 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 + DHLIVG + I S L+ Sbjct: 251 TIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRH-LRETGVAFT--STQAARDWLKLKMAGLEREEF 61 + + + + ++ + + R LR+ +F+ + + ++ + E F Sbjct: 65 EELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVENF 124 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L L+ +N++I+ E + G+I+ + VHPREV K A+ A ++IL HNHPSG PS A Sbjct: 125 YALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNA 184 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 D +T+RL + LV I+V DH+IV S + Sbjct: 185 DIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMRK 219 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 79/128 (61%) Query: 33 RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 E + + +++ ++ RE+F +L+LN NQL+ E LF GSI + V+PRE Sbjct: 100 EEKNIHIQRKEDLISYVRAQIGFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPRE 159 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 ++++ L + A +VI AHNHPSG+T PS+ D +T+ + AL++ D+ + +H+IV + Sbjct: 160 ILEKVLKYKAKSVIFAHNHPSGNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYF 219 Query: 153 SFAEHGLL 160 SF E GLL Sbjct: 220 SFLEEGLL 227 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 3/153 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + + AL L R + + +A K+ ++E F + LN Sbjct: 72 NGIGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYEKKENFYAVMLN 131 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +IA E + G ++ HPREV K A+ A++VIL HNHPSG TPS D IT+ Sbjct: 132 TAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPSDEDVLITK 191 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 RL+ A +++ I V DH+I+G S + G + Sbjct: 192 RLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 4/147 (2%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLR----ETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 + + + RH + + V + ++ ++ ++E F L Sbjct: 249 EIKGIGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKKKEHFYAL 308 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 L+ +N+LI + + G++ ++ VHPREV K A+ +AA VIL HNHPSGD PS+ D Sbjct: 309 LLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSENDVE 368 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQI 151 ITQ++ +A +++I+V DH+I+ + Sbjct: 369 ITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 83/133 (62%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 L + + ++ TS ++LK + + E F +L+LN QN+L+ E LF G+I + Sbjct: 108 LYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRST 167 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 ++ RE++K+ L +NA +VIL HNHP+G PS +D +T+++ + + ++IR+ DHLI+ Sbjct: 168 IYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLIIS 227 Query: 148 GRQIYSFAEHGLL 160 + +SF E G+L Sbjct: 228 EQGYFSFLEGGIL 240 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 47/123 (38%), Positives = 79/123 (64%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 + + +LK + +ERE F +LY N +N LI E +F G+I + V+ RE+VK Sbjct: 89 KISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNI 148 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 L +NA ++I+ HNHPSG+ PS D+ +T++++ L+L+D+R+ DH+I+ + YSF E+ Sbjct: 149 LKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLEN 208 Query: 158 GLL 160 G + Sbjct: 209 GQI 211 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREE 60 + + + +K + L R ++ S++ + + + + L EE Sbjct: 73 IERLVEFKGIGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEE 132 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +LYLNQ N+L+ L G I+ T V R KRA A +ILAHNHPSG TPS Sbjct: 133 FWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSS 192 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D+ IT++ A VD+R+ DHLIV + +SFA+ GLL Sbjct: 193 SDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 69/132 (52%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 DR T S + + ++ EEF + ++ +N+LI E + G++ V Sbjct: 95 DRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIMVDNKNRLIDFEKMSRGTVDQAPV 154 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGG 148 PRE++ AL A+ VIL HNHP GD PS D+ +T+++ + + +R+ DH+I+ Sbjct: 155 FPREILTVALEKRASGVILLHNHPGGDPHPSFQDRELTRKIREVSTALGVRLLDHVIISE 214 Query: 149 RQIYSFAEHGLL 160 +SF EHG L Sbjct: 215 DSFFSFQEHGFL 226 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 82/138 (59%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 V A + L + A + + + K++G+ E +LYLN Q ++I + + Sbjct: 38 VLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSH 97 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G+++ V+PRE+VK AL +AAA+I++HNHPSG PS+AD +T+ L AL LVD+R+ Sbjct: 98 GTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRL 157 Query: 141 PDHLIVGGRQIYSFAEHG 158 DH+IV G+ S AE G Sbjct: 158 VDHIIVTGQNTTSLAERG 175 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR--HLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 S + + + + L R + R S + +++ ++ + +E Sbjct: 65 SELQEIKGIGQAKAMQIIAVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKEHLF 124 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+LN +NQ+I +E + G+++++ HPREV K A+ +A A+IL HNHPSGD PS AD Sbjct: 125 VLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNAD 184 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +T+ L QA + I + DH+I+G +SF EH LL Sbjct: 185 RQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 P VK + + + L S + A + + G +RE F++L L+ +NQ Sbjct: 23 PAKRVDIVKLKM-IKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPT 81 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 GS++S+ VHPREV+K A+ NAA++I+AHNHPS D TPS D +T+RL++A Sbjct: 82 TINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAG 141 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++V I V DHLIV S E G + Sbjct: 142 KVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 76/137 (55%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 + + ++ +F ++ + M +E+EE ++ N +N LI LF G++ Sbjct: 107 SRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRGTV 166 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +++ RE+ AL ++A + L HNHPSGD +PS D +T+++ QA +L+ + + DH Sbjct: 167 NASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLLDH 226 Query: 144 LIVGGRQIYSFAEHGLL 160 +I+G +SF E G++ Sbjct: 227 VIIGDNSYFSFKERGII 243 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEFM 62 + + + + AL L R F + + ++ E F+ Sbjct: 63 ELTRISGIGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFL 122 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ LN + ++I E + GS++++ VHPRE AL +AAA++ HNHPSGD TPS+ D Sbjct: 123 VVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSRED 182 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +T+ L +++ I + DHLI+G YSF EHGLL Sbjct: 183 RELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 78/150 (52%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P + T + + L + S+ +L K+ G ++EE LY++ N Sbjct: 58 PNCSSSLAITAEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWALYVDNGN 117 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +++A + +F G+++ + HPRE+ + A+ ++ + + +AHNHPSG PS D +T+ L Sbjct: 118 RIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFELTKDLY 177 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +++ I + DH IVG Q S E L Sbjct: 178 RAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 3/153 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + T+ A + R ET ++ + L EEF +LYLN Sbjct: 73 KGIGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPHEEFWVLYLN 132 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 N++I LF+G I+ T V R + K AL A A+IL HNHPSG TTPS+ D +TQ Sbjct: 133 STNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDIELTQ 192 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 R+ A +++DI++ DH+IV ++ SF + L Sbjct: 193 RVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFM 62 + Q + T+ A L R E + S++A ++L +M L+ EE Sbjct: 77 QLEQYKGVGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVEEAW 136 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ LNQ +LI + G IS T V R ++K AL NA + LAHNHPS PS D Sbjct: 137 VMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPD 196 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQR+ +A + + I DH+I+ YS+ + G L Sbjct: 197 DQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 5/154 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLEREE 60 I + + +K AL + R+ LR+ TS + A M L E Sbjct: 61 EEISKEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTET 119 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 ++L+ + +I + + G+++ + HPR++ + A+ +NA + IL HNHPSGD TPS Sbjct: 120 VRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSM 179 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 D+ IT++++ + +++ I + DH+I+G +SF Sbjct: 180 HDRDITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 5/159 (3%) Query: 6 LIPQTPVLPLTAQRT--VKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 L P+ + QR + AL L R E + +L+ RE Sbjct: 61 LNCDIPLTGVGRQRRYQLSCALLLATRLAEEELFERSPLKDPGSCYKYLQHHYLLQSREV 120 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F L+L+ Q QL+A +F G++++ V+PRE+V AL A+A+I+AHNHPSG PS Sbjct: 121 FTCLFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSV 180 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 AD +T RL +AL L+DI + DHLIV + S A GL Sbjct: 181 ADIQLTDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLE----REEFMMLYLNQQNQL 72 A + R T R V TST A ++ K A L +EEF ++ L+ +++ Sbjct: 175 AGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTLDTKHKP 234 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I + G++ S+ VHPREV + A+ AAAV+L HNHPSGD TPS+ D +T+RL +A Sbjct: 235 IRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVTERLTEA 294 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAE 156 +L+ I V DH++V ++ S E Sbjct: 295 GKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHL-RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + + + + + R + TS A ++LK ++ +E + LYLN Sbjct: 78 KIKGIGEAKALQILAIIEIAKRMDDHAEKIKITSVSDAFNYLKF-LSKETQEHMVALYLN 136 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 N LIA E + GS++ V PR+++ A+ N +I++HNHP+ D TPSQ D T+ Sbjct: 137 SSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTK 196 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L + + DH+IVG + YSFA+ GL+ Sbjct: 197 KLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 79/119 (66%) Query: 42 TQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFN 101 + A + +K + ++R+ F+++ L+ +NQ A GS++++ VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 102 AAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A+VI+AHNHPS D TPS+ D +T+RL++A +++ I + DH++VGG + S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 92/143 (64%), Gaps = 4/143 (2%) Query: 21 VKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 ++ A + R + + ++TQ +LK ++ + E F L+L+ Q+++IA+E Sbjct: 82 LQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEE 141 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF+G+I++ V+PR +V+R L NAAA+ILAHNHPSG + SQ D IT+R+ AL LVD Sbjct: 142 LFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVD 201 Query: 138 IRVPDHLIVGGRQIYS-FAEHGL 159 R+ DH+++G ++YS FAE+ Sbjct: 202 ARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 88/147 (59%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 ++A VK+A R + + + D+L++ + L +E F ++Y+N++ +LI Sbjct: 78 AISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKENFRVIYMNKKYRLI 137 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A + G++ T ++ RE++KRAL + +++++HNHPS DT PS +D ++T++L +A Sbjct: 138 AEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDISLTRQLAEAC 197 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 Q + I + DH+I+ +SF E+ LL Sbjct: 198 QSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 83/143 (58%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 R ++ A +R + Q D+L ++A E+F +L+LN++N LIA E Sbjct: 74 IRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSLIADEA 133 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 G+++ T V+PREV +RA+ A A++L HNHPSGD TPS+AD +T ++ AL++V Sbjct: 134 QARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAALEVVG 193 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 + + DH I+G + SF LL Sbjct: 194 VTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 G S+Q L + L +E+ +L L+ Q+++I +T+F G+++S VHPRE+ + Sbjct: 83 GEVLASSQ-LGQVLMDDLRYLLQEQLEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFR 141 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 A+ AA VI+AHNHPSG PS +D+ QRL QL+ I + D +VG +SF Sbjct: 142 VAVMSGAATVIVAHNHPSGQPQPSTSDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFK 201 Query: 156 EHGLL 160 E G+L Sbjct: 202 EAGIL 206 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + + + +L + R V + + L A +S++ + L + + E Sbjct: 90 LQKVKGLGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNEC 149 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++YL+ QN+++ ET F GS++++ V+ RE++ +AL A+AV+LAHNHPSG+T PS+ Sbjct: 150 FFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSK 209 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGG-RQIYSFAEHGLL 160 D +T L A + V+I + +HLI+G + YSFA+HG L Sbjct: 210 NDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEF 61 + + + ++ + DR L + ++ ++L + RE F Sbjct: 70 EALCRIDGIGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRETF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++++ +N++I ETL GS++ + V+PREVV RAL +AAA+I HNHPSG+ PS+ Sbjct: 130 AAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQ 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++LV A + + I V +H+IVG R +SFA++G + Sbjct: 190 DIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 3/158 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREE 60 + + T+ A L R E +S A +++ +M L+ EE Sbjct: 99 IQELTNYKGIGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVEE 158 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +L +NQ+ +LI + G IS T V R +++ A+ NA + L HNHPS PS Sbjct: 159 AWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPST 218 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 D +T+R+ +A QL+ I DH+IV + YS+ E G Sbjct: 219 EDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARD---WLKLKMAGLEREEF 61 + + + + + L R + + + RD + K + E F Sbjct: 78 EQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALESF 137 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +LYLN ++++ H + G I+ T V P+ + + AL A VIL HNHPSG+ PS A Sbjct: 138 HVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTA 197 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L A +L+DI V DH+IV S E G + Sbjct: 198 DIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLK-LKMAGLEREEFMMLYL 66 P+ +P R V+ + L D T + + L EE + +L Sbjct: 17 PKVTFIPRYGVRLVRESQVLYDNK------KITVAADICSICNTIGLPDLPHEELHVFFL 70 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +N + + + G+++++ +HPREV + A+ NA A+IL HNHPSG+ PS ADK +T Sbjct: 71 STKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVT 130 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 160 +++ + ++ I + DH+I+G +SF + GL Sbjct: 131 KQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLF 165 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 73/119 (61%) Query: 42 TQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFN 101 ++ L A LE+E+ +L L+ +NQ+I + +F G+++S PRE++K AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 102 AAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 A V++AHNHPSGD TPS+ D T+RL A +L+ + + D I+G +SFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + +K AL L R R+ + + A +K ++ RE FM Sbjct: 72 ELLEVQGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENREIFM 131 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ + + LI +E + GS+S T VHPREV A+ AA++I+ HNHPSGD PS D Sbjct: 132 AIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQD 191 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ L++ +L+ I + DHLI+G SF + LL Sbjct: 192 LKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 8/162 (4%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTST-----QAARDWLKLKMAGLE 57 E+ L V P+ A + + L R + T ++ + ++ + +M + Sbjct: 69 EKELCNIQGVGPVKAVEII--CICELARRIARTRHSYDEPLDTAAKISKRY-MEEMRHFK 125 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 E ++L L+ + +LI T+ G+I+ + + PREV +AL + A ++L HNHPSGD T Sbjct: 126 EEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPT 185 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 PS+AD +T ++++ +LV I + DH+I+G SF E GL Sbjct: 186 PSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREE 60 + Q L +K AL L R R A + A +K + +E Sbjct: 72 IEELCQIKGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEH 131 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ + + + +I T+ G++++T VHPREV A+ AA++IL HNHPSGD TPS+ Sbjct: 132 FLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSK 191 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 D +T+ LV +LV I V DH+I+G + S E G Sbjct: 192 EDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + E S I QT + L A + + + R + G +S + L +M E+E Sbjct: 69 LKEISGIGQTKAIELRAMIELGKRIQTTTR--KRYGQVLSSKEYGMS-LAFEMQNFEQEH 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 YL+ QNQ+I +T+F G+ + PRE++ A+ + +++AHNHPSG+ PSQ Sbjct: 126 LTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQ 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 ADK T+++ A + I DH+IVG YSF E Sbjct: 186 ADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 83/140 (59%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 V+ AL + R + V D+LK+K+ E F++LYLN++ LIA E Sbjct: 93 VREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKRYSLIADEVQST 152 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G++ T ++ REV+++AL A ++++HNHPSGD PS+AD +T +L A +DI + Sbjct: 153 GTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNKLRIACNSMDIEL 212 Query: 141 PDHLIVGGRQIYSFAEHGLL 160 DH+IV ++ YSF HGLL Sbjct: 213 VDHVIVTSKRHYSFKTHGLL 232 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 M + P + +K L R + + + Q D+ +M L Sbjct: 68 MSYEELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTN 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E + Y + +++ + + + GS+SS+ V +++ AL NA+ ++L HNHPSGD TP Sbjct: 128 EVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T RL++ + I + DH+I+G + YSF E+ L+ Sbjct: 188 SRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 88/154 (57%), Gaps = 10/154 (6%) Query: 17 AQRTVKRALTLLDRHL--RETGVAFT--STQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 A+ T RA+ L R L E FT ++A +L +AG +EEF +L L+ +N+L Sbjct: 80 AKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDTKNRL 139 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 + + G + + VHPREV + AL + A +ILAHNHPSGD +PS D T+ L++A Sbjct: 140 MRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKNLIEA 199 Query: 133 LQLVDIRVPDHLIVGGR------QIYSFAEHGLL 160 +++ ++V DHLI+G + Q S + GL+ Sbjct: 200 GEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 3/139 (2%) Query: 25 LTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 L++R L++ + S + D+LK+ M + E+F +L+LN++N LIA E L G Sbjct: 111 RELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEVLSQG 170 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 +I V+PRE++KRAL+ A+ +IL HNHPSG PS+A +T +V + ++I V Sbjct: 171 TIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTINIIVH 230 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH+I+ + +SF + LL Sbjct: 231 DHVIISNNKYFSFKSNMLL 249 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLYL 66 L + ++ + L R +R V +++ + + AG +E ++L+L Sbjct: 67 IRGLGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFL 126 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +NQ+I + + G++ S PR V + AL +A +I+ HNHPSGD +PSQAD+ T Sbjct: 127 DVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTT 186 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 R A L+ + + DHLI+G + YSFA Sbjct: 187 TRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 7/151 (4%) Query: 17 AQRTVKRALTLLD-RHLRETG----VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQ 71 RT++ L +++ R +RE S QA + + +++ +RE F +L + Q Sbjct: 7 EIRTMENELEVVNIRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQ 66 Query: 72 LIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQ 131 +I + G+I+++ V PREV K ++ NA+A+I HNHPSG+ PS+ D +T++L + Sbjct: 67 VINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQK 126 Query: 132 ALQLVDIRVPDHLIVGG--RQIYSFAEHGLL 160 QL+ I + DH+IVGG ++ SF E +L Sbjct: 127 CGQLLGIELLDHIIVGGTNGKMLSFREEKML 157 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 74/137 (54%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 ++ L+D + + A L + ++RE F +L L Q+I G++ Sbjct: 3 SIRLVDDPPIYSEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTL 62 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +S + PRE+ K ++ NAA+VIL HNHPSGD TPS+ D +T+RLV +L+ I V DH Sbjct: 63 NSCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDH 122 Query: 144 LIVGGRQIYSFAEHGLL 160 +I+G S E ++ Sbjct: 123 VILGKETYLSMKEANMM 139 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 5/150 (3%) Query: 15 LTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 ++ A+ L R R+ G S Q + + + +E ++L L+ +N Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQ-IGNLMVARFQKNPQEHLVLLCLDTKN 132 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 Q+ +F G ++S EVHPRE++ L +++ IL HNHPSG+ PS D T+++ Sbjct: 133 QIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMK 192 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + L+ IR+ DHLIVG + +S AE+ +L Sbjct: 193 KIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGLER 58 M E+ L TP++ ++ A + L E TG T+ L+ +M+ LE+ Sbjct: 43 MSEEEL---TPLVGRAHAIRLRTAFAIGHAKLAEAVTGEPITTPMQVVALLQAEMSHLEQ 99 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EE ++ L+ Q +I T+ G++++ ++ + L NAA+VILAHNHPSG Sbjct: 100 EELRVISLSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWA 159 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 S D +T++ +QA QL++I + DHLI+G S E L Sbjct: 160 SPEDILLTKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 7/163 (4%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAA----RDWLKLKMAGLE 57 + Q + VK AL + R L+ V T+ + A + + Sbjct: 73 EELLQIKGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLMNEG 132 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E F +L L+++N+ I H + GS T V P+E++K+ +A A+IL HNHPSGD + Sbjct: 133 KEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPS 192 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D +T++L QA +LV ++ DH+IVG Q S A L+ Sbjct: 193 PSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEF 61 + P + T+ A+ L R + S A L + E F Sbjct: 81 EELMAIPGVGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATERF 140 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L L+ +++L+ + G+ + T HPRE+ + A+ NA+ +I+AHNHPSG+ +PSQA Sbjct: 141 AVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQA 200 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 D +T++++QA QL++I V DHLI+G S E Sbjct: 201 DLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + L + + R L + + ++ ++ D+L+L + + E + Sbjct: 68 LAAYKGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVSVA 127 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L LN+QNQLIA L G+++ V+ RE+VK AL A ++ILAHNHP PS++D Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDV 187 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL QAL LVDI + DH IV ++ S E G + Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 2/149 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGV--AFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + + AL R T + + + L+ KM+ L +E F+++ L+ Sbjct: 71 KGINKAKAIGIMAALEFSKRINIHTNINEVYDNPTKVFYHLETKMSHLSQEHFLIMILDN 130 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 N+LIA +TLF GS++ + V RE+ + AL FN ++I HNHPSGD PS D ++TQ+ Sbjct: 131 HNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDISMTQK 190 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 LV +++++ + DH+I+G Q YSF Sbjct: 191 LVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 2/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRT--VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLERE 59 L+ + V P+ A +++ + R D+++ M LE E Sbjct: 68 PRHRLLEFSGVGPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIE 127 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +F L+LN+++ +IA E + G++ T V+PRE+++RAL A+A+IL HNHPSGD TPS Sbjct: 128 QFRCLFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPS 187 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D +T +LV + + I + DH+IV SF LL Sbjct: 188 RPDIEMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 1/137 (0%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 AL LL +++ + + QA D+L+ MA E +L+LN +N L+ E + GS+ Sbjct: 95 ALRLLRSKVQDRPI-LSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRDELVSEGSV 153 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 V+ RE+++RAL +AA+I+ HNHPSGD PS+ D +T+ L+ A + + I + DH Sbjct: 154 DQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKPLGIAIHDH 213 Query: 144 LIVGGRQIYSFAEHGLL 160 ++VG R S GL+ Sbjct: 214 VVVGTRGQASLRALGLI 230 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREE 60 Q L + TV A+ L R + + T ++ A + + L +EE Sbjct: 67 QELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQEE 126 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +L LNQ ++I+ E L G +S T R ++ +A+ A+A+ILAHNHPSG PS+ Sbjct: 127 MWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSE 186 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 160 D +TQR+ +A L+ R+ DHLI+G +SFA+ GLL Sbjct: 187 QDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 54/126 (42%), Positives = 82/126 (65%) Query: 35 TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVV 94 G ++ A+ +L+L++AGLE E ++ L+ Q +LI + F G++S V+PRE++ Sbjct: 49 HGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQLRLITYLEPFRGTLSQAPVYPREIL 108 Query: 95 KRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 K AL NAA +++AHNHPSG SQAD+ +TQ + QAL L+D+R+ DH IV G + S Sbjct: 109 KLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQQALALIDVRLLDHFIVAGTTVVSM 168 Query: 155 AEHGLL 160 A+ G L Sbjct: 169 AQRGQL 174 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 3/152 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHL--RETG-VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + L ++ A+ L R L RE G S+ + + ++ EE LYLN Sbjct: 62 GIGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNT 121 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 N+++ + + G + +T V R V+KRAL A +IL HNHPSG PS+ DK +T++ Sbjct: 122 GNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKK 181 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +A L DIR+ DHLI+ YSF + GLL Sbjct: 182 IAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 4/158 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR----ETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + TA + L R+ RD+L MAG E F Sbjct: 78 LATVEGMGETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFY 137 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L L+ Q +L+ + G+I VHPR+VV+ + AA VILAHNHPSG+ SQ D Sbjct: 138 VLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDD 197 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T L+QAL +D++V DHLI+ G +++SFA G++ Sbjct: 198 ILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 6/164 (3%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLL------DRHLRETGVAFTSTQAARDWLKLKMAGL 56 + + + + + +K LL + + T +A +L+ K+ Sbjct: 79 DIKELEKIKGIGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYE 138 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 + E+F ++YL+ N++IA E +G++ + ++PRE+ KR + NA ++I+AHNHPSG+T Sbjct: 139 DVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNT 198 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D IT + + L+ + +H+I+ +SF E GL+ Sbjct: 199 CPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 78/136 (57%) Query: 25 LTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSIS 84 L+ + + + S++ D+L+ ++ G ++E F +L L+ + + + + LF GS++ Sbjct: 107 RRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDSELRKLNFKKLFYGSLN 166 Query: 85 STEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHL 144 + + ++ AL +A +++AHNHP G PS AD +T +L QA QLV+I++ DH Sbjct: 167 ACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQLYQACQLVEIKLLDHF 226 Query: 145 IVGGRQIYSFAEHGLL 160 I+ +SFAE LL Sbjct: 227 IIAKDGTFSFAERALL 242 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 3/147 (2%) Query: 17 AQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 +++ V A L + L+E V A S+ + + + EE +L LN ++LI Sbjct: 71 SRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSSSKLI 130 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + G I++ V R ++K+ALY+NA + I+ HNHPSG PS AD +T+ + +A Sbjct: 131 RKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAVKKAA 190 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +DIR+ DH+IV G YS+A+ G L Sbjct: 191 ETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 5/138 (3%) Query: 28 LDRHLRETGV----AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 +++ +RE S + + +RE F ++ LN +N ++A GS+ Sbjct: 10 IEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVAVHRCHVGSL 69 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +S+ VHPREV K A+ N A+VILAH HPSGD PS D +T+RLV+A +L+ I V DH Sbjct: 70 NSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLGIEVLDH 129 Query: 144 LIV-GGRQIYSFAEHGLL 160 LIV S E G + Sbjct: 130 LIVNSDNSFTSLKERGYI 147 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 4/138 (2%) Query: 27 LLDRHL----RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGS 82 L R + RE G+ + ++ EEF + L+ Q++L + G Sbjct: 107 ELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAILDAQHRLERDVLITRGL 166 Query: 83 ISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPD 142 ++S+ VHPREV + A+ AAAVIL HNHPSGD TPS D+ +T++LV A +L+DI V D Sbjct: 167 LNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVTEQLVAAGRLLDIPVHD 226 Query: 143 HLIVGGRQIYSFAEHGLL 160 H+IVG + SFAE GLL Sbjct: 227 HIIVGRGRYVSFAEAGLL 244 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREE 60 Q + + + +L + R+L +TG +Q +D++ + G RE Sbjct: 65 QETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPREV 124 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L L+ LI E LF G ISS V + V++ AL + +I+AHNHP D TPS Sbjct: 125 FAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPST 184 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 AD +T L +A L+D+ + DH+IVG + S+AE+ L Sbjct: 185 ADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 71/133 (53%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 LDR + A +L+ + ERE FM++ L+ + +++ T+ GS++ E Sbjct: 112 LDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAVGSLTRVE 171 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 VHPREV + + A +L HNHPSGD PS+AD +T R+ + + I V DH++V Sbjct: 172 VHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPVLDHVVVS 231 Query: 148 GRQIYSFAEHGLL 160 S AE GL+ Sbjct: 232 ANGFVSLAELGLV 244 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 7/162 (4%) Query: 1 MMEQSLIPQTPVLPLTAQRTV--KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLER 58 +ME + + L L R V K A + L + + + ++ + +A + Sbjct: 72 LMEVKGVGKETALFLKVVRGVYKKYAFSKL-----KKADIIRTPEDVANYCRASLAEHKD 126 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F ++YL +N +I E L G+I + PR+VV+ AL A ++L HNHPSGD +P Sbjct: 127 EVFEVIYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSP 186 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D + T+ + QA +++ I V DH+IV YS + Sbjct: 187 SMEDISFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 1/131 (0%) Query: 31 HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHP 90 FT A + + +RE ++L LN + + A E G +++ + Sbjct: 40 RALYGMTRFTDPGMAAEMVWPLFEMADREMALVLSLNTKLEPQALEIAAVGGLNACSIDC 99 Query: 91 REVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR- 149 R++ K A+ NAA +I HNHPSGD PS D+ +T+RL + +++ I + DH+IVG Sbjct: 100 RDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLIDHIIVGEGP 159 Query: 150 QIYSFAEHGLL 160 YSF E G+L Sbjct: 160 CCYSFKEQGML 170 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 72/123 (58%) Query: 38 AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRA 97 + D+L+ + + E + L LN+QNQLIA L G+++ ++ RE+VK A Sbjct: 102 TLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLA 161 Query: 98 LYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 L A ++I+AHNHP G PSQ D T+RL QA+ LVD+ + DH IV + + SF + Sbjct: 162 LDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQL 221 Query: 158 GLL 160 GL+ Sbjct: 222 GLM 224 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + + + L R L E S A D+L+L + RE F+ L+L+ Sbjct: 126 RGIGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLFLD 185 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +++L+ E GS++ V+PRE+V+RAL NAAA+I+AHNHPSG PS AD+ +T+ Sbjct: 186 ARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRLTR 245 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L AL LVDI++ DH +VG +SFA+ G + Sbjct: 246 VLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 4/155 (2%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + + + + R+L+ E S+ ++L +M GL++E F +++ Sbjct: 79 EVKGVGPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCVVF 138 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ + +I E + GS++ VHPRE++ +AL +AAA+I++HNHPSG PS D + Sbjct: 139 LDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQL 198 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+ L + I++ DH+I+G SFA+HGL+ Sbjct: 199 TRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 78/132 (59%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 ++ L+ + + +K + ++RE +++ L+ +N++ + G+++S+ V Sbjct: 14 EQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIV 73 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGG 148 HPREV K A+ N A++ILAHNHPSGDT+PS+ D IT R+ + L+ I + DH+I+G Sbjct: 74 HPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLMGIELLDHVILGD 133 Query: 149 RQIYSFAEHGLL 160 + S G++ Sbjct: 134 EKFISLKNEGII 145 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 80/146 (54%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + RTV+ ++ + R + S ++ D+L+L + E +L+LN++ LI Sbjct: 91 VALIRTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIR 150 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 G+ T + RE++K+ L A+A+++AHNHPSG+ PSQ D IT +L + Q Sbjct: 151 EYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQ 210 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 VD+++ DH IV +SF +GLL Sbjct: 211 KVDVQLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 35 TGVAFTSTQAARDWLKLKMA--GLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 T + + + E F + LN +N++I + GSI+S+ VHPRE Sbjct: 23 ERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKNEIIGCSIVSQGSINSSVVHPRE 82 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 + A+ NAA+++ HNHPSG+ S D+ +T+RL + +++ I + DH+I+G + Sbjct: 83 TFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLAECGKILGIELLDHVIIGEHRFV 142 Query: 153 SFAEHGLL 160 S E G + Sbjct: 143 SLREKGCI 150 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 4/164 (2%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKL-KMAGL 56 + + + + T + L +R+ + + T ++ ++G Sbjct: 62 LPSYDTLLRINGIGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGK 121 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 +E F++ LN +++I T+ G ++ + VHPREV A+ AAA+I HNHPSG+ Sbjct: 122 SQEHFLVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNP 181 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D T+T++L +A +++ I + DHLI ++ S G L Sbjct: 182 EPSSEDITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 76/132 (57%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 + + + + ++ +L+ K+ E E+F ++YL+ N++I E G++ + V Sbjct: 101 KKLIDKETLKISNKDILLKYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSV 160 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGG 148 +PRE+ K+ + NA ++ILAHNHPS + TPS++D +T + + L+ + +H+I+ Sbjct: 161 YPREIYKKVINLNAKSIILAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITK 220 Query: 149 RQIYSFAEHGLL 160 +SF E GL+ Sbjct: 221 NSYFSFLEEGLI 232 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 80/136 (58%) Query: 25 LTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSIS 84 L + V + A +LK K+A ++E F+ L+L+ +L+ E LF G++ Sbjct: 86 ARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVD 145 Query: 85 STEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHL 144 V+PRE+ +RA+ A VI+AHNHPSG+ +PS+ D T+T +L++AL +DI + DH+ Sbjct: 146 RLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHI 205 Query: 145 IVGGRQIYSFAEHGLL 160 I+ + YSF ++ Sbjct: 206 IITTKGFYSFKREQVI 221 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 49/141 (34%), Positives = 79/141 (56%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 V+ + + R + Q +L+ M +RE+ +L+LN Q+QL+A + + Sbjct: 7 LVRESGLRIQRARLQHSGILAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLADDIMG 66 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G++ T V+PRE+V RAL A ++L HNHPSGD TPS D +T ++ A ++++I Sbjct: 67 QGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAKIMNIH 126 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH+IV G ++ E G L Sbjct: 127 VWDHIIVAGEKLLCMREAGFL 147 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 3/159 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 + + + +K + L R + ++ + ++ ++ Sbjct: 64 LSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQ 123 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E + LYLN QNQ+I+ +T+F GS++ + PRE++ A+ A ++I+ HNHPSG P Sbjct: 124 EHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQP 183 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 S+ D T+ L ++ + + + + DHLIVG + YSF E Sbjct: 184 SRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + + + R V S Q+ ++LK + L +E F++ Sbjct: 70 ELMKHKGIGQEKAIHILANIEFARRIYATNVLDVKCDSPQSIANYLKSSLENLTQEVFVV 129 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L ++ + ++I +F GS+S + VHPREV K A+ +A++++ HNHPSGD TPS D Sbjct: 130 LDIDTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDI 189 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 T L++ ++V I + DH++V + S + Sbjct: 190 KTTINLMEVGEIVGIEMLDHIVVAKKGYVSIRK 222 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 77/133 (57%) Query: 26 TLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISS 85 LL S R +L+ ++ RE F LYL+ +N+LI E LFAG+I Sbjct: 89 DLLAEAGLYQRDLIASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDG 148 Query: 86 TEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLI 145 V PREVV+ AL +AA+VI+AHNHPSG PS+ D+ +T+RL AL LVDIR+ DH I Sbjct: 149 AAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFI 208 Query: 146 VGGRQIYSFAEHG 158 VG S A G Sbjct: 209 VGFGDSVSLASLG 221 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 5/150 (3%) Query: 15 LTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 A ++ + L R ++ G S Q + + +E ++L L+ +N Sbjct: 71 PDATVALEAGIELGRRIQKQPIHLLGKVLGSAQ-LGQMMVSRFQKEPQEHLLVLCLDTKN 129 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 Q+ +F G ++S EVHPRE++ L +A + +L HNHPSG+ PS D T+++ Sbjct: 130 QIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFTKKMK 189 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + L+ IR+ DHLIVG + +S AE + Sbjct: 190 KVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTST---QAARDWLKLKMAGLEREEFM 62 + + L + +K ++L+ +L + A T + ++L +K+ L+ E F Sbjct: 61 ELLRVKGLNDKKIKLIKSIPSILEYYLLSSLKADTPNFKKRDLINYLIIKLGKLKFETFS 120 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ L+ + I+ E +F G+I S ++PR++V+++L ++ VI++HNHPSG PS+ D Sbjct: 121 IVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKED 180 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT L +A ++VDI++ DH+I+ YSF E G+ Sbjct: 181 INITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 11/154 (7%) Query: 18 QRTVKRALTLLDRHLRETGVAF-----------TSTQAARDWLKLKMAGLEREEFMMLYL 66 R K AL R +RE AF S + A L ++A E E F+++ L Sbjct: 1 MRRRKHALPAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIAL 60 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 N Q+++IA + + G + + VHPREV + A+ AAA+I+AHNHPSGD PS D+ +T Sbjct: 61 NAQHRMIALQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVT 120 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++LV A +L+D+ V DH+IVG SFAE GLL Sbjct: 121 EQLVAAGRLLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 3/143 (2%) Query: 21 VKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 + A LL R LRE S Q RDWL+L AGL+ E F+++YL+ ++LI E Sbjct: 51 LDVARELLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEE 110 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 LF G+++ T V+PREVVK AL NAAA+ LAHNHPSG+ PS+AD+ +TQ L AL LVD Sbjct: 111 LFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVD 170 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 +R+ DH IV G ++ SFAE GL+ Sbjct: 171 VRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHLRETGVAF-TSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 L + +L L R+L ++ S + A + L + ++E F+ L L+ N Sbjct: 71 GLGEAKIPVIVASLELARRYLLDSDQPIIDSPEKAVELL-SDIRDKKQEYFVCLTLDGAN 129 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LIA + G+++++ VHPREV A+ AA++I+AHNHPSG SQADK +T RL Sbjct: 130 RLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDVTSRLA 189 Query: 131 QALQLVDIRVPDHLIVGGRQIYSF 154 +A +L+ I + DH+I+ S Sbjct: 190 EAGRLLGITLNDHIIITKTDFVSI 213 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 2/127 (1%) Query: 35 TGVAFTSTQAARDWLKLKMAG-LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 G +S Q + +K A + E LYL+ +N+++A E +F GS+SST V+PRE+ Sbjct: 25 RGQEISSAQEVYNIMKPVFAETDDVETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREI 84 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS 153 +KR + ++AV++ HNHP+GD PS D IT RL+ AL+ +++ + DH+IVG YS Sbjct: 85 IKRVIALKSSAVVITHNHPTGDPGPSVEDTRITIRLLVALKSMNVDLHDHIIVG-EGYYS 143 Query: 154 FAEHGLL 160 FA+ G++ Sbjct: 144 FADAGVI 150 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEF 61 S + + + T+ LL R + + +S WL L++ E+E F Sbjct: 73 SQLSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELF 132 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L+L+ QN LI + LF G+ + VHPR+V + A+ NA+ ++L HNHP G + S+A Sbjct: 133 RVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEA 192 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 D +T+ L++ ++ I V DH+IV S Sbjct: 193 DVEVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 82/142 (57%), Gaps = 4/142 (2%) Query: 22 KRALTLLDR-HLRETGV--AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 ++A TLLD+ + E+ +S +AA L + E F++L+++ +N++I + + Sbjct: 5 EKAKTLLDQLYAMESSPDYVLSSPEAAVIQLLP-FRKKKTENFVVLFVDNKNRMICKKVV 63 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 G++ V PRE+++ A+ A+ +IL HNHP G + PS+ D+ +T ++ + + I Sbjct: 64 AKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMELGI 123 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 RV DH+I+ +SF E+G L Sbjct: 124 RVLDHIIICDSGHFSFQENGYL 145 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 2/150 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 + + TV A+ L R+ + L+ A +RE F+ + LN Sbjct: 72 IRGMGDSKISTVLAAMELGRRYYDNKNRTISHPTDVVPLLQ-HYADRDREHFICVSLNGA 130 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 N++IA + G+I+ T VHPREV L AAA+I AHNHPSG+ PS D +T+R+ Sbjct: 131 NEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMELTKRI 190 Query: 130 VQALQLVDIRVPDHLI-VGGRQIYSFAEHG 158 +A +++ I++ DH+I V +SF + G Sbjct: 191 YEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 A + + A+ ++++ + + A + ++ ++RE F ++ L I Sbjct: 2 ADKLEQVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINMN 61 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 + GS++ ++PRE+ K A+ NA +++L HNHPSG+ TPS +D T R+ + +L+ Sbjct: 62 IVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGELM 121 Query: 137 DIRVPDHLIVGGRQ-IYSFAEHG 158 I + DH+I G YSF + G Sbjct: 122 GISLVDHIITGRNGNYYSFRDKG 144 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + I + + L A + + L + + + + + +E Sbjct: 62 LKSIKGIGKMKAIQLVAIVEIAKRLHVPKPM---QLIDLKNPEDVAGLFVEEFENKFQEM 118 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F LYL+ + LI + G+++ T VH R+V + A+ A ++I+ HNHPSGD PS+ Sbjct: 119 FYALYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSK 178 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D TIT+ L +++ I + DH+IVG S + G+L Sbjct: 179 QDITITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 53 MAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHP 112 + +RE F ++ LN +N ++A GS++++ VHPREV K A+ NAA+VI+AH HP Sbjct: 9 IGRDDREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHP 68 Query: 113 SGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV-GGRQIYSFAEHGLL 160 S D TPS+ D +T+RLV+A +L+DI V DHL+V S E G + Sbjct: 69 SDDITPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 2/151 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 TP A V+ L + + + + + + ++ + L EEF ++ +NQ Sbjct: 48 TPGRRRVAVAAVEMYKRQLSQQVERRQIRMS--KDVYELMEPLIGDLPNEEFWVVSINQA 105 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 ++I + G I T R +++ + A HNHPSG++ PS DK +T++L Sbjct: 106 GRIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLTEQL 165 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A L +IR+ DH+I+ YSF + GL+ Sbjct: 166 KKAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_A6DQ92 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQ92_9BACT Length = 169 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%) Query: 35 TGVAFTSTQAARDWLK-LKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 V +A D+LK + +A +E F++L LN +N + + + G + T V REV Sbjct: 29 KPVQANQPEAVFDFLKTIGVADEAQEVFIVLVLNTKNFITGYCEVSRGLVDRTHVACREV 88 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG------ 147 + AL A+ +I+ HNHPSG TPS D+TIT L +A +L+ + V DHLIVG Sbjct: 89 FRPALINGASKIIVVHNHPSGVLTPSHQDRTITNNLQEAGELLGVEVIDHLIVGYCLNKQ 148 Query: 148 GRQIYSFAEHGLL 160 SF + G + Sbjct: 149 KHHFLSFRQEGFM 161 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 3/147 (2%) Query: 16 TAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 +A + L+R L+E Q ++L + + ERE +LYLN++ QLI Sbjct: 73 SAVAMIMCVKETLERVLKEKLKSEPIMDLQGIVEYLNVSIGHSERECVKILYLNKRRQLI 132 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 E+ + G + V+ +E+ ++AL NA ++I++HNHP G PS+ D+ +T+ L A Sbjct: 133 GEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLAAAC 191 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 V +++ DH+I+ +SF E+GLL Sbjct: 192 STVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 3/139 (2%) Query: 25 LTLLDRHLRETGVAFTSTQAARDWLKLKMAGLE---REEFMMLYLNQQNQLIAHETLFAG 81 + L + ++ S++ A +L +E F +L+LNQ +Q++ + + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 I+ T V R +++ AL N+ A+ILAHNHPSG+ PS+ D IT+++ A QL+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DHLI+ YSFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%) Query: 12 VLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQ 71 + + + A + R ++ G+ L A ++E F+ + +N N+ Sbjct: 76 GIGMAKAAAICAAFEFVRRRVKPQGLKIKFPADVLP-LIHHYADRKQEHFLCVSINGANE 134 Query: 72 LIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQ 131 +++ + G I+ T+VHPREV L A+AVI+AHNHP GD PS+ D +T++L Sbjct: 135 VMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVTRQLKD 194 Query: 132 ALQLVDIRVPDHLIVGGRQIYSFAEH 157 A Q + + DH+I YSFAE Sbjct: 195 AAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJC8_9FIRM Length = 158 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%) Query: 36 GVAFTSTQAARDWLK--LKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 S + A +++K + + E F+++ ++ +++ + + G+++ + VHPREV Sbjct: 26 PRTLHSPEDAAEFIKSVIDFDTVPCELFIVVPIDSKSKPLCVTVVTKGTLNCSLVHPREV 85 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS 153 + L NAAA + HNHPSGD TPS+ DK IT+RLV+A ++D+ V DH+IVG YS Sbjct: 86 FQPCLLANAAACFVFHNHPSGDVTPSREDKAITERLVKAGHILDVPVLDHIIVGDN-FYS 144 Query: 154 FAEHG 158 F G Sbjct: 145 FRTDG 149 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 74/142 (52%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 R V+ A R + + + D+L+ + RE F +++L+ + E L Sbjct: 114 RLVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVIFLDASGAWSSDEEL 173 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 G++ V+ REV++ AL +AAA++L HNHPSGD TPS AD +T + A + + Sbjct: 174 GRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQVTSEIAAAASALGM 233 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 V DHL+VG + SF GLL Sbjct: 234 SVKDHLVVGSHGVASFQALGLL 255 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 2/133 (1%) Query: 28 LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTE 87 L++ R+ V +T ++L++K+ G ++E FM+L+LN QN L+ + + G++ Sbjct: 97 LEQKARDVDV-LDNTTKIVNFLRMKLGGGKKETFMVLFLNAQNHLLCFDVI-PGTVDRAT 154 Query: 88 VHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVG 147 V+ REV+++A+ A AVILAHNHP+G PS AD +T + Q LQ V I + DH+IV Sbjct: 155 VYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTIRQVLQPVGILLHDHIIVA 214 Query: 148 GRQIYSFAEHGLL 160 +SFA +L Sbjct: 215 PSCYFSFASRRML 227 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 69/126 (54%) Query: 34 ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREV 93 E + + +MA LE+E+ ++ L+ +N+++ T+ G ++ +V E+ Sbjct: 131 EERPVIRTPEDVYAIAGAEMATLEQEQLRVVLLDTRNRVVRTVTVAQGHVNGAQVRIAEL 190 Query: 94 VKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS 153 + A+ N A++L HNHPSGD TPS+ D +T+ V+A L+ I V DHL++G + S Sbjct: 191 FREAIRANTPALVLLHNHPSGDPTPSRQDIELTESAVEAGTLLGIEVVDHLVIGHGRFCS 250 Query: 154 FAEHGL 159 GL Sbjct: 251 LRRLGL 256 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%) Query: 13 LPLTAQRTVKRALTLLDRHLRE----TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + A T + + R +RE T A + + +RE F+++ LN Sbjct: 3 GAVKAMETTYEIVKI--RQVREEVDIPRKKITGPDTAAEIATYFIGDDDREIFLVMCLNT 60 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 QN+++A GS++S+ VHPR+V K A+ N+ ++++AH HPSG PS ADK +++R Sbjct: 61 QNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKR 120 Query: 129 LVQALQLVDIRVPDHLIVGG-RQIYSFAEHGLL 160 L A +L+ I V D LIV + YS E G L Sbjct: 121 LYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 153 >UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N2U6_9FIRM Length = 225 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 2/157 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMM 63 + Q + V + + R ++ A + + LK ++ ++E+ ++ Sbjct: 67 QLIQIKGIKQAKAIEVLAIIEIAKRLDKQPVAMSAIKEPRDGYELLKNQLMFEQQEKVIV 126 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L LN + ++I +T+F G + + + RE+ K AL + V++ HNHPSG+ PS D Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL + +DI V DHLI+G + YSFA + ++ Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 195 4e-49 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 190 2e-47 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 187 1e-46 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 186 1e-46 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 185 3e-46 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 185 4e-46 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 184 8e-46 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 182 4e-45 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 182 4e-45 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 181 6e-45 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 181 6e-45 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 180 1e-44 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 180 1e-44 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 179 2e-44 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 178 7e-44 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 178 8e-44 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 177 1e-43 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 176 2e-43 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 176 2e-43 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 176 3e-43 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 175 3e-43 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 175 3e-43 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 175 4e-43 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 175 4e-43 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 175 4e-43 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 175 5e-43 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 175 5e-43 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 174 6e-43 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 174 7e-43 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 174 7e-43 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 174 1e-42 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 173 2e-42 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 173 2e-42 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 173 2e-42 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 173 2e-42 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 172 3e-42 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 172 4e-42 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 171 6e-42 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 171 6e-42 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 171 6e-42 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 171 6e-42 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 171 8e-42 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 170 1e-41 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 170 1e-41 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 170 2e-41 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 169 2e-41 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 169 2e-41 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 169 2e-41 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 169 3e-41 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 169 3e-41 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 169 3e-41 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 169 4e-41 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 168 4e-41 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 168 4e-41 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 168 4e-41 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 168 5e-41 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 168 5e-41 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 168 6e-41 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 168 7e-41 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 168 8e-41 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 167 9e-41 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 167 9e-41 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 167 1e-40 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 167 1e-40 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 166 1e-40 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 166 2e-40 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 166 2e-40 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 166 2e-40 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 166 2e-40 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 166 2e-40 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 165 3e-40 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 165 3e-40 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 165 4e-40 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 165 5e-40 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 165 5e-40 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 165 5e-40 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 164 6e-40 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 164 6e-40 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 164 8e-40 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 164 8e-40 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 164 8e-40 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 164 1e-39 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 164 1e-39 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 164 1e-39 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 164 1e-39 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 163 1e-39 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 163 2e-39 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 163 2e-39 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 163 2e-39 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 163 2e-39 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 163 2e-39 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 162 3e-39 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 162 4e-39 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 162 4e-39 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 161 6e-39 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 161 6e-39 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 161 7e-39 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 161 7e-39 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 161 8e-39 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 161 9e-39 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 161 9e-39 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 161 1e-38 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 160 1e-38 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 160 2e-38 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 160 2e-38 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 160 2e-38 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 159 2e-38 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 159 2e-38 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 159 2e-38 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 159 2e-38 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 159 3e-38 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 159 3e-38 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 159 3e-38 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 159 3e-38 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 159 3e-38 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 159 3e-38 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 159 4e-38 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 158 4e-38 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 158 4e-38 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 158 5e-38 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 158 6e-38 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 158 7e-38 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 158 7e-38 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 158 9e-38 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 157 1e-37 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 157 1e-37 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 157 1e-37 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 157 1e-37 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 157 1e-37 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 156 2e-37 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 156 2e-37 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 156 2e-37 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 156 2e-37 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 156 2e-37 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 156 2e-37 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 156 3e-37 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 156 3e-37 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 156 3e-37 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 155 4e-37 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 155 4e-37 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 155 4e-37 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 155 4e-37 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 155 5e-37 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 154 6e-37 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 154 6e-37 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 154 6e-37 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 154 7e-37 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 154 7e-37 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 153 1e-36 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 153 1e-36 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 153 1e-36 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 153 1e-36 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 153 1e-36 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 153 2e-36 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 153 2e-36 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 153 2e-36 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 153 2e-36 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 153 2e-36 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 153 2e-36 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 153 2e-36 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 153 2e-36 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 153 3e-36 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 152 3e-36 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 152 3e-36 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 152 4e-36 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 151 6e-36 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 151 7e-36 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 151 7e-36 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 151 7e-36 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 151 9e-36 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 151 9e-36 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 151 1e-35 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 150 1e-35 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 150 1e-35 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 150 2e-35 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 150 2e-35 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 150 2e-35 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 150 2e-35 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 150 2e-35 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 149 2e-35 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 149 3e-35 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 149 3e-35 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 149 3e-35 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 149 3e-35 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 149 4e-35 UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri... 148 4e-35 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 148 6e-35 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 148 6e-35 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 148 7e-35 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 148 7e-35 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 148 7e-35 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 147 1e-34 UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepI... 147 1e-34 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 147 1e-34 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 147 2e-34 UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteri... 146 2e-34 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 146 2e-34 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 146 2e-34 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 146 2e-34 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 146 3e-34 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 146 3e-34 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 146 3e-34 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 145 4e-34 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 145 4e-34 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 145 4e-34 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 145 5e-34 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 145 5e-34 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 144 6e-34 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 144 7e-34 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 144 7e-34 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 144 8e-34 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 144 1e-33 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 144 1e-33 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 144 1e-33 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 143 1e-33 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 143 2e-33 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 143 2e-33 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 143 2e-33 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 143 2e-33 UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succ... 143 2e-33 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 143 2e-33 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 142 3e-33 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 142 4e-33 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 142 4e-33 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 142 4e-33 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 142 5e-33 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 142 5e-33 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 141 5e-33 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 141 6e-33 UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttle... 141 7e-33 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 141 8e-33 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 141 9e-33 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 141 9e-33 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 141 1e-32 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 140 1e-32 UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C... 140 1e-32 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 140 1e-32 UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio Re... 140 1e-32 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 140 2e-32 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 140 2e-32 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 139 3e-32 UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter... 139 3e-32 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 139 4e-32 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 139 4e-32 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 138 5e-32 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 137 9e-32 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 137 1e-31 UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpuscul... 137 1e-31 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 137 1e-31 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 137 2e-31 Sequences not found previously or not previously below threshold: >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 195 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 160/160 (100%), Positives = 160/160 (100%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE Sbjct: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ Sbjct: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL Sbjct: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLER 58 +E + + P + + A+ L R R+ + + A ++ ++ L++ Sbjct: 68 LEVAELLSVPGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKK 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F+ L L+ +++++A +T GS+ ++ VHPRE+ +RA+ +A++++ HNHPSGD +P Sbjct: 128 EHFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D +T+RLV+A +++ I V DH+++G + S G L Sbjct: 188 SPEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 187 bits (475), Expect = 1e-46, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 E + + Q L L ++K A TL R ET FTS D+ ++ +E Sbjct: 70 ELNELQQIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKE 129 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ L L+ +N++ + GS++ + VHPREV A+ +AAAVI HNHPSGD PS Sbjct: 130 LFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPS 189 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D IT+RL +A +++ I+V DH+I+G +SF E GLL Sbjct: 190 REDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 186 bits (474), Expect = 1e-46, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 +Q Q L +T ++ + R+L + FTS R +L+ ++ +RE Sbjct: 62 DQKHFCQMKGLGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDRE 121 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 FM+L+L+ Q++LI E +F G+I+ V+PRE++K AL+ NAAA+ILAHNHPSG +TPS Sbjct: 122 IFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPS 181 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+ +T+ + Q +L++IRV DH I+G +SFAE G + Sbjct: 182 MADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLERE 59 + + + + +K A+ + R + + + A +++ +M ++RE Sbjct: 67 SVEQLAEVKGVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDRE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F L LN +N++I+ E + G+++S+ VHPRE+ K A+ +AAA+IL HNHPSGD TPS Sbjct: 127 HFKALLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D +T+RL +A ++V I V DH+++G + S GL Sbjct: 187 REDIDVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 185 bits (471), Expect = 4e-46, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLERE 59 E + Q + + + A+ L R + V S + L +M L++E Sbjct: 72 EIEELQQIKGVGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKE 131 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F + LN ++++IA E + GS++++ VHPREV A+ +++A+IL HNHPSGD +PS Sbjct: 132 YFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPS 191 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RLV+A +L+ I V DH+I+G YS E ++ Sbjct: 192 GEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + A L R +R + + S + ++ +M L++E F Sbjct: 67 EEMMSIHGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEHF 126 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + LYLN +NQ+I +T+F GS++++ VHPREV K A AA++I HNHPSGD PS+ Sbjct: 127 VCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSRE 186 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+RLV+ +++ I V DH+I+G + S E G + Sbjct: 187 DIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 2/160 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA--FTSTQAARDWLKLKMAGLEREE 60 S + L + +K + L R L E F S + ++ K+ GL++E Sbjct: 65 SISELKSFKGLGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEV 124 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ L L+ + +LI + G+++ + +HPREV K A+ +A AVIL HNHPSGD TPS+ Sbjct: 125 FITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSE 184 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L +A ++++I + DH+I+G + +S E G++ Sbjct: 185 QDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 3/163 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLE 57 + S + + + + L R + E S + + KM + Sbjct: 66 LANVSRLMKVHGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQK 125 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E+F+ L L+ +NQ++ E + GS++++ VHPREV K AL ++A+VI+ HNHPSGD + Sbjct: 126 KEKFITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPS 185 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D +T+++V+ +L+ I V DH+I+G + S + G + Sbjct: 186 PSREDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 4/160 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAF-TSTQAARDWLKLKMAGLEREE 60 + + + P L T+ L L R+L E G A + A +L+ ++ G RE Sbjct: 66 AELARLPGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREV 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FM L+L+ +++LIA E LF G+I++ V+PREVV+RAL NAAAVIL+HNHPSGD PS Sbjct: 126 FMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSS 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD IT L QAL +VD+R+ DH +VG + SFAE GLL Sbjct: 186 ADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLER 58 + + + + +K L R + G++F + D+ ++ E+ Sbjct: 70 LSLAQLQAVKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQ 129 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E + + L+ +N L+ E +F G+++S+ +PRE+ A+ ++A ++L HNHPSGD TP Sbjct: 130 ELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTP 189 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQAD TQR+ +A +L+ I + DH+I+G + SF E G+ Sbjct: 190 SQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGIF 231 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 94/155 (60%), Positives = 120/155 (77%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 L+P T L AQRT++RA+ LLD++LR+ G+AFTS+ AARDWL+L +A ERE FM+LY Sbjct: 26 LLPTTSGLTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLY 85 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ Q++L+ ETLFAGS++ +VH REVVK AL FNAAAV+LAHNHPSGD PSQ D+ I Sbjct: 86 LDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNI 145 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T RL +AL+LVD++ DHL+VG I SFAE G L Sbjct: 146 TGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEF 61 S + + ++ L R R G +TS QA ++ +RE F Sbjct: 69 SELQAIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERF 128 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L L+ +N+L+ + GS++++ VHPR+V + +AAAV+ HNHPSGD +PS+ Sbjct: 129 IALLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSRE 188 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ITQRL + +L+ +RV DH+I+G S A+ G+L Sbjct: 189 DLDITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + Q + + AL L R +S L+ ++A L+RE Sbjct: 68 SVHELKQVKGIGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDRE 127 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+++ LN +N++I T+ G++SS+ VHPREV K A+ +AA+V+LAHNHPSG PS Sbjct: 128 HFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPS 187 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D+ +T R+ +A ++ I V DH+IVG +S EHG+L Sbjct: 188 REDREVTGRVAEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 178 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 + + + + L T+K A L +R + T D++ M L +E Sbjct: 64 SINDLIKVKGIGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F++L LN +N +I +F G+++S+ VHPRE+ A+ NA A+I HNHPSGD TPS Sbjct: 124 HFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 Q D T RL + ++ I + DH+I+G + S E G Sbjct: 184 QEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGYF 224 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 178 bits (451), Expect = 8e-44, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 S + + P + +K A L +R + TS + + ++ RE Sbjct: 82 ISELCEIPGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREH 141 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ + LN ++ L+ + + GS+++T VHPREV RA+ +A VIL HNHPSGD PSQ Sbjct: 142 FLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQ 201 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T RLV A L+ I + DH+I+G ++ YSF+ L Sbjct: 202 DDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 M S + Q + + L L R ++ + F++ + + M LE+ Sbjct: 68 MSVSELMQIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEK 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E +++ L+ + +LI + L G+ + + V RE+ K AL AA+V+L HNHPSG+ +P Sbjct: 128 EHLVLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T+ +++A +++ I + DH+++G +SF + + Sbjct: 188 SREDMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + L +K L R+ A S + R++L+ ++ G ERE F++++L Sbjct: 68 VNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIFL 127 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + Q++++ H LF+G+++ EVHPRE+V+ A+ NA+AVILAHNHPSG PS+ADK IT Sbjct: 128 DAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLIT 187 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+++ Q +DIRV DHLI+G + SFAE G + Sbjct: 188 ERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFM 62 + + P + + L L R + E S A + L +M ++E F+ Sbjct: 60 GLEKAPGVGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFI 119 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 LYLN +N++I+ +TLF G ++++ VHPR++ + A+ +AA+ I HNHPSGD TPS+ D Sbjct: 120 CLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSRED 179 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++R+V+A +L+ I DHL++G Q S + G + Sbjct: 180 IEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + ++ A L R + A +S Q +WL ++ ++E F+ Sbjct: 67 ELMEIDGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEHFL 126 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +++LNQ+NQ++A++TLF G+++S VHPRE+ K A+ A +I AHNHPSG+ S AD Sbjct: 127 VVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDAD 186 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ITQ++++ QLV I + DH++VGG + S E G + Sbjct: 187 IAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 97/157 (61%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + P L + + AL L +RHL E G A + + + ++ E F Sbjct: 68 LARLPGLGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAA 127 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+L+ +++ IA E LF G+I + E+HPREVV+RAL NAAAV++ HNHPSG+ PS+AD+ Sbjct: 128 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 187 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQRL+QAL LVDIR+ DH ++G + S AE G + Sbjct: 188 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + + +K L R+ R A S RD+L+ ++A ERE F++++L Sbjct: 77 IGGVGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFL 136 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + QN++I TLF G++S EVHPRE+V+ A+ NAA +ILAHNHPSG PS+ADK +T Sbjct: 137 DSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVT 196 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +R+V++ QLVDIRV DHL++G + SFAE G + Sbjct: 197 ERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLEREEFM 62 + + ++ A+ L R + + + F TS+Q L +M GL++E + Sbjct: 72 ELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLI 131 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +YLN +N +I +T+F GS++ + HPRE+ + A+ +++A ++LAHNHPSG+ TPS D Sbjct: 132 CIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQD 191 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+R+ + +++ I++ DH+I+G S E Sbjct: 192 IQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 175 bits (444), Expect = 4e-43, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + + + + + A + R + + + + L+RE Sbjct: 84 DLKELTRVAGVGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKRE 143 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++ LN N +IA T+ G ++++ V PR V +RA+ NAA +I HNHPSG+ PS Sbjct: 144 VFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPS 203 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++LV+A +L+ I V DH+I+ G S AE GL+ Sbjct: 204 AEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 175 bits (444), Expect = 4e-43, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLER 58 M + + + + L R H +ET + S A + L ++ + + Sbjct: 62 MTFQELITIKGIGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQ 121 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F++L LN +N ++ T+F GS++++ VHPREV K A+ +AAA+I+ HNHPSGD P Sbjct: 122 EHFIVLSLNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEP 181 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D T+RL++ ++ I V DH+I+G S E G+L Sbjct: 182 SYEDIEATKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLER 58 E + + V L L R L + TS++ D + +++ L++ Sbjct: 67 EVKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKK 126 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + L+ +N +IA E + G + ST V+PREV K A+ +A ++IL HNHPSG+ P Sbjct: 127 EYFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKP 186 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D IT RL +A ++DI+V DH+++G YSF + G L Sbjct: 187 STEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 3/154 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLYL 66 + ++ L R L E+ S A R +L+L +A L +E F+ L+L Sbjct: 71 IRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFL 130 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +N++IA E LF G+++ T V+PREV +RAL NAA+VI+AHNHPSG TPSQ+D +T Sbjct: 131 DTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMT 190 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + L +AL L+D+R+ DH +V G ++SFAEHG L Sbjct: 191 RMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 174 bits (443), Expect = 6e-43, Method: Composition-based stats. Identities = 93/159 (58%), Positives = 121/159 (76%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 MEQ L L Q+TV++AL+LL+ LRETG +FTS+ A RDWL+L++A LEREEF Sbjct: 1 MEQQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEF 60 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L+L+ Q++LIAHETLF G+I+ T+VHPREVVK L N AAVI+AH+HPSG+ PS+A Sbjct: 61 TALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKA 120 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T R+ QAL LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 121 DRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 174 bits (443), Expect = 7e-43, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 + + + L +K A L R E + + + + ++E Sbjct: 68 SVEELSKLKGIGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKE 127 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F L L+ +++LI + GS+ + VHPREV K AL +AA+VILAHNHPSGDT PS Sbjct: 128 YFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPS 187 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ++ RL +A ++ I V DH+I+GG+ S GLL Sbjct: 188 HDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 174 bits (443), Expect = 7e-43, Method: Composition-based stats. Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + L +K L R+ S + +D+L+ +++ ERE Sbjct: 61 NLDEFRYVEGIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAERE 120 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 FM+++L+ Q++++ H +F+G++ EVHPRE+V+ A+ NAAAVILAHNHPSG PS Sbjct: 121 VFMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPS 180 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +ADK IT+R+++ Q +DI V DH I+G + SFAE G + Sbjct: 181 KADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLERE 59 +++ + + +K L + +L+E+ +++ D+L L M L+ E Sbjct: 151 DKAKLMDIEGVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIE 210 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +++L+ NQ I E LF G+++++ V+PRE+VK A+ NAA++I HNHPSGD TPS Sbjct: 211 IFKVIFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPS 270 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D+ IT+ L+ A LV I V DH+I+G +SFA+ GLL Sbjct: 271 GSDRAITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 69/157 (43%), Positives = 95/157 (60%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + L + + L L R + + F QA + +L+L +A E F + Sbjct: 83 LKHVKGLGPAKRAEIVAVLELARRAMAQRLQEREVFADPQAVKHYLQLHLAAKGHEVFAV 142 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+L+ QN+L+A E LF G+++ T V+PREVV RAL+ AAAV+LAHNHPSG PS+AD+ Sbjct: 143 LFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADE 202 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ L AL LVD+RV DH+IVG Q S AE GL+ Sbjct: 203 ALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + L + + L L R L + F + A + +L+L +A E F + Sbjct: 78 LKRIKGLGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKPHEVFAV 137 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+L+ QN+L+A E LF G+++ T V+PREVV RAL+ A++V+LAHNHPSG PS+AD+ Sbjct: 138 LFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADE 197 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ L L L+D+RV DH+IV + S AE GLL Sbjct: 198 MLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 4/160 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + +T + + A R ++ + T D + L++E Sbjct: 73 KELTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEV 132 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +++LN N +I T+ G +SS+ V PR V ++A+ +AAAVI HNHPSG+ PS+ Sbjct: 133 FKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSR 192 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L +A + I V DHLI+ G + S AE G++ Sbjct: 193 EDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLER 58 + S + + ++ L R + G FTS QA D+ L++ Sbjct: 69 LSASALCDIKGVGKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQ 128 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E +L + + +L++ +T+ G+++ + V PRE+ AL A VIL HNHPSG+ P Sbjct: 129 ERVFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQP 188 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D+ +T R+ ++ +L++I + DH+I+G R+ +SF E G + Sbjct: 189 SPEDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLERE 59 + + P + + + A L + + +K + L++E Sbjct: 71 SKEELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKE 130 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F L LN +N +I ET+ G+++S+ VHPRE+ K+A+ +AAAVIL HNHPSGD TPS Sbjct: 131 YFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPS 190 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D ++T+RL++A +++ I V DH+++G + S GL+ Sbjct: 191 REDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 84/156 (53%), Positives = 114/156 (73%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 S + TPV ++ QR ++RA+ LL+++ R G +F S+ A + WL+L +A ERE F++L Sbjct: 2 SELMLTPVFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVL 61 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 YL+ QN+L+ HETLF G+I+STEVHPRE+VK AL NAAAVILAHNHPSG PS+AD+ Sbjct: 62 YLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRL 121 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT +V+ L LV++RV DH I+G + SFAE G L Sbjct: 122 ITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLERE 59 Q + + L + R L+E G F S Q+ +D+L+L + E Sbjct: 64 SQQEFSSINGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +L+ +++LIA E LF G+++ V+PRE+ KRAL+ NAAAVILAHNHP+G+T PS Sbjct: 124 VFACFFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++D +T+ L +AL ++D+ V DH+IVG +Y F EHG + Sbjct: 184 ESDVILTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 6/162 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL--RETGVAFTSTQAA----RDWLKLKMAGLER 58 + + + ++K A+ + R + + S + R+ +M +R Sbjct: 74 EELTAEKGIGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMRHYDR 133 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F +LYL+++ LI + + G + S+ VHPREV K A+ +AA++IL HNHPSGD TP Sbjct: 134 EHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTP 193 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQ D IT+RL++A +++ I + DH+I+G S GL+ Sbjct: 194 SQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLERE 59 ++ L +T ++ + R+L++ + + +L ++ ERE Sbjct: 61 DKKAFCSVKGLGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEERE 120 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 FM+L+L+ Q++LI E LF G+I+ + V+PRE++K ALY NAAA+ILAHNHPSG T PS Sbjct: 121 VFMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPS 180 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D+ IT+++ A +L++I V DHLIVG YSFAE+ LL Sbjct: 181 YSDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLT---AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + L + V+ A L R TS A D+ MA E E+F + Sbjct: 107 LAEVSGLGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRV 166 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 LYL+++N LIA E G++ V+PRE+++RAL +A+A+IL HNHPSGD TPSQAD Sbjct: 167 LYLDRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADI 226 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T R+V A +++ I V DHLI+G + SF GLL Sbjct: 227 GMTNRIVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 75/160 (46%), Positives = 107/160 (66%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 M Q + P LP Q+ + +AL +L+ LR TS +A + WL+L + RE Sbjct: 1 MPHQPMRASLPTLPFAQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGREC 60 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 FM+L+L+ +++L+A ET+ G+ ++T V+PREVV RAL+ AAV++AHNHP+GD TPSQ Sbjct: 61 FMVLFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQ 120 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+T+T +LV AL +VDIRV DHLI+G + S AE G L Sbjct: 121 ADRTLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHL----RETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + TV A+ L R ++ F+ +A + K+ ++E F+ Sbjct: 70 LISVKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFI 129 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 + +LN +N+L+ ++ + GS+ + V +E ++ AL F A +IL HNHPSG PS AD Sbjct: 130 VCFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDAD 189 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T++ +A DIR+ DH+I+G + S ++GL+ Sbjct: 190 INLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 E + + A V+ + +L+E + T D+ K + GL+ E Sbjct: 146 ELEELTAVRGISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDE 205 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +LYL+ QN++IA ET+ G ++ V+PR+V++RAL ++A+IL HNHPSG PS Sbjct: 206 NFCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPS 265 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ + +L+DI V DHLI+G + +SF E G++ Sbjct: 266 DADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFM 62 L+ + + +K ++ R L+ S + D+ MA RE+F Sbjct: 123 LLQEVKGVGEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFR 182 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+L+++N LIA E G++ T V+PRE+V+RAL ++ A+IL HNHPSGD TPS+AD Sbjct: 183 ILFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRAD 242 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+ ++ + + I V DH+I+G SF L+ Sbjct: 243 IEMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 7/165 (4%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREE 60 + + + + A L R RET S + D L +M L RE Sbjct: 67 SVKELSKIKGVGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRES 126 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 ++ L+ + LI E + GS++ + HPREV + AL ++A AVIL HNHPSGD TPS Sbjct: 127 LRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSS 186 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQ-----IYSFAEHGLL 160 AD +T+RLVQ +L+ IR+ DH+I+G +SF E G++ Sbjct: 187 ADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLER 58 M S + + + ++ AL L R E TS++ A ++ + L Sbjct: 68 MSVSQLIKFKGIGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPH 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +L+LN N++I+ L G I+ T V R V K L A +IL HNHPSG+ P Sbjct: 128 EEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 SQADK IT+++ A +++D+++ DHLI+ + YSF + G+ Sbjct: 188 SQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEF 61 + + + +K L R + V T+ + D+ + +E Sbjct: 83 EKMQKIRGIGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHL 142 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ + + + + L GS + T V PREV + A+ +AA +IL HNHPSG PS A Sbjct: 143 IVCMFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHA 202 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+R++ QL+ I + DH+I+G +S+ E+ + Sbjct: 203 DDVVTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + + + + +K + DR+L + ++ +L + RE Sbjct: 107 SVEELCRVNGVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPRE 166 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ ++L+ +N+++A E LF GS+SS+ V+PREV+ +AL AAA+I AHNHPSG+T+PS Sbjct: 167 VFVGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPS 226 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RL AL I V +HLI GG + YSFA+ G++ Sbjct: 227 PEDLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREE 60 + + + L A +K R + ++ +S A D+ + MA +RE+ Sbjct: 91 EPRLREVSGLGEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQ 150 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L+L+++NQLIA E G++ T V+PRE+VKRAL +A AVI+ HNHPSGD TPSQ Sbjct: 151 FRILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQ 210 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ +V + + + V DH+IVG S L Sbjct: 211 ADIQMTKTIVAIAEPLGVAVHDHIIVGKNGHASLKGLKLF 250 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + Q + + L R R + + F+S + D+ M RE Sbjct: 71 SLDELIQIKGIGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTRE 130 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +++LN + +LI + G+I S V PRE+ A NA +IL HNHP GD TPS Sbjct: 131 ILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPS 190 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D IT+R+ +A +L+ IR+ DH+++G S E G Sbjct: 191 REDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEF 61 + Q + +K AL + R L G S A ++++M+ L++E+ Sbjct: 71 EELAQRRGMGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQL 130 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L+ +N++ +T++ GS+ ++ V E+ K + N+A++I+ HNHPSGD TPS Sbjct: 131 RAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPE 190 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 D +T+++++A +L+DI V DHL++G + S E GL Sbjct: 191 DVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR--HLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 S + + + + L R + R S + +++ ++ + +E Sbjct: 65 SELQEIKGIGQAKAMQIIAVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKEHLF 124 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+LN +NQ+I +E + G+++++ HPREV K A+ +A A+IL HNHPSGD PS AD Sbjct: 125 VLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNAD 184 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + +T+ L QA + I + DH+I+G +SF EH LL Sbjct: 185 RQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 66/141 (46%), Positives = 101/141 (71%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 V RA+ +LD H+ + G TS + +D+L+L++ +RE F +++++ Q++++A+E LF Sbjct: 49 IVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRVLAYEPLF 108 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G+I T V+PR +V+RA+ NAA++ILAHNHPSG T PS+ADK +T RL L+ +D+R Sbjct: 109 FGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSLLESIDVR 168 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH I+G +SFAEHGLL Sbjct: 169 VLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLERE 59 S + + + +K L R F S + + ++ E+E Sbjct: 71 SVSDLKKIHGIGTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQLRHQEQE 130 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 + + L+ QN L+ L G++++T + PREV AL ++A +IL HNHP G+ PS Sbjct: 131 IMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPS 190 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + DK IT+R+ QA +++ I + DH+I+G + SF E GL+ Sbjct: 191 KCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 + Q L +K AL L R R + A +K + +E Sbjct: 72 IEELCQIKGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEH 131 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ + + + +I T+ G++++T VHPREV A+ AA++IL HNHPSGD TPS+ Sbjct: 132 FLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSK 191 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 D +T+ LV +LV I V DH+I+G + S E G Sbjct: 192 EDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + L R + + F + + D+ + E E Sbjct: 84 EDLVSIRGIGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERL 143 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +++ L+ + +LI E + G+++++ V PRE+ AL A +++ HNHPSGD PS Sbjct: 144 VLVMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSN 203 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+R+ A +++ I + DH+I+G + S E GL+ Sbjct: 204 DIAITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLER 58 + + + + + AL L R + + ++ Sbjct: 59 QDVRELTRISGIGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENH 118 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F+++ LN + ++I E + GS++++ VHPRE AL +AAA++ HNHPSGD TP Sbjct: 119 EHFLVVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTP 178 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D+ +T+ L +++ I + DHLI+G YSF EHGLL Sbjct: 179 SREDRELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 2/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV--AFTSTQAARDWLKLKMAGLERE 59 M + + Q + + ++ L R ++ + +W K + + +E Sbjct: 63 MHVNTLMQIQGIREVKALQLLASVELSKRVIKSKVYHAPILKPEDVIEWFKFEYGTMSQE 122 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F+ LYL+ +++LI+H LF G+++ + VHPREV K A NA +V++AHNHPSGD TPS Sbjct: 123 CFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPS 182 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AD +T ++V + + + DH+IV Q YSF EH L Sbjct: 183 KADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 168 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLEREEFM 62 + Q + ++ L R + + F S+Q + +AG +E+ + Sbjct: 65 QLRQIEGIGPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLL 124 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +YL+ +NQ+I + L+ G+++S+ HPREV K A+ ++AA IL HNHPSG PS D Sbjct: 125 AVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQD 184 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+R+V QL+ I DHLI+G Q S E G L Sbjct: 185 INFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 94/147 (63%), Gaps = 4/147 (2%) Query: 18 QRTVKRALTLLDRHLRE----TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 + A L+ R L E + + + +LKL + G ++E F++L+L+ Q++LI Sbjct: 59 AAIISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLI 118 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A E LF G+++ T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ +T L QAL Sbjct: 119 AAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQAL 178 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVD+R DH I+G SFAE GL+ Sbjct: 179 ALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 2/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLR--ETGVAFTSTQAARDWLKLKMAGLERE 59 M + + P + TV AL L R L + RE Sbjct: 65 MPAAEFARIPGIGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERRE 124 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +L L+ +N+++ + G++++T VHPREV + A+ +AA +I+AHNHPSGD PS Sbjct: 125 HFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPS 184 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+ L +A L+ I V DH+IV +SFAE GLL Sbjct: 185 AEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 1/151 (0%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 + L + A+ R L + G+ + ++ ++E F+ L L+ Sbjct: 70 IEGVGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLKI-TEELKDKKQEYFLSLTLDGA 128 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 + LI T+F G+++ + VHPRE+ A+ AA +I HNHPSGD+ PS+ D IT+RL Sbjct: 129 SNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRL 188 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 V+ +++ I V DH+I+ YSF G+L Sbjct: 189 VEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 4/159 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEF 61 I + + T+K AL L R L S+ + + +M LERE Sbjct: 65 EEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREIV 123 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ L+ + +I TL G+ + +HPR+V + A+ NA+ VI+ HNHPSGD TPS+ Sbjct: 124 KVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKE 183 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ IT+RL QA +++ + + DH+IV R +SF E G L Sbjct: 184 DRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 4/150 (2%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLR----ETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + RH + + V + ++ ++ ++E F Sbjct: 246 ELQEIKGIGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKKKEHF 305 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 L L+ +N+LI + + G++ ++ VHPREV K A+ +AA VIL HNHPSGD PS+ Sbjct: 306 YALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSEN 365 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQI 151 D ITQ++ +A +++I+V DH+I+ + Sbjct: 366 DVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLER 58 + + + T+ A + R E + + ++ + L Sbjct: 64 QTLAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPH 123 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +LYLN N++I L +G I+ T V R + K AL A ++IL HNHPSG TTP Sbjct: 124 EEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTP 183 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 S+ D +T+R+ A +DI++ DH+IV ++ YS Sbjct: 184 SKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYYSI 219 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFT--STQAARDWLKLKMAGLEREEF 61 + + + P L + +K L L + T S + K +A E E Sbjct: 32 EKELLRVPGLGPRKAKQLKAVFDLSKALLEPDDTSITIQSPADVFENFKY-LALHEEEYL 90 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L+LN +N+++ H T+ G+++++ +HPREV A+ A+V++ HNHPSGD TPS+ Sbjct: 91 VALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSRE 150 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT+RL +A +++ I + DH+++G + S E LL Sbjct: 151 DIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLER 58 + + T+ A + R ET ++ + L Sbjct: 64 QSLQQLQAFKGIGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPH 123 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +LYLN N++I LF+G I+ T V R + K AL A A+IL HNHPSG TTP Sbjct: 124 EEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTP 183 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +TQR+ A +++DI++ DH+IV ++ SF + L Sbjct: 184 SKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREE 60 + + + + ++ + + R + + + + ++ + E Sbjct: 64 VEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVEN 123 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F L L+ +N++I+ E + G+I+ + VHPREV K A+ A ++IL HNHPSG PS Sbjct: 124 FYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSN 183 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 AD +T+RL + LV I+V DH+IV S + Sbjct: 184 ADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMRK 219 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 +++ + L +K L + RH + G A T + L+ + RE Sbjct: 64 DEAAFCEAKGLGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSRE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++ L+QQNQ I LF G+I+ VH REV+K L +AAAVILAHNHPSGD TPS Sbjct: 124 IFGLVLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGG-RQIYSFAEHGLL 160 Q+D+ +T ++ Q LQL++ R DH+I+G + YSF + G+L Sbjct: 184 QSDRDLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREE 60 + + + + R E A +S ++ L +EE Sbjct: 66 EEQLKKFKGIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEE 125 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F + +N +N++I E L G++ T V+PREVV AL NA+ VIL HNHP GD +PS Sbjct: 126 FWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSP 185 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T + Q ++IR+ DH+IV + +SF E G L Sbjct: 186 EDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEF 61 + Q + + L R E + A WL ++ G ++E F Sbjct: 69 KELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEHF 128 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + +YL+ +N ++ H LF G++ ++ VHPREV K AL +A V++ HNHPS D TPS A Sbjct: 129 LAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLA 188 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ ITQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 189 DRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 71/146 (48%), Positives = 102/146 (69%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 +A + ++ A ++D+ + + G FTS A +D+L+ K+AG E E F +L+L+ +++LI Sbjct: 25 ASADQILEAARQVIDQKM-QRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLID 83 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + +F G+I S EVHPREVVK AL NAAAVI++HNHPSG+ PS AD+ +T +L QAL Sbjct: 84 YAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALA 143 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVD+R DH+IV G SFAE GL+ Sbjct: 144 LVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEF 61 + P L T+ L L R E A + + + + K +A E Sbjct: 67 QELMSLPGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEHC 126 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + LYL+ Q LI L G+++ V+PREVV+ AL +AAA+ILAHNHPSG PSQA Sbjct: 127 LALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQA 186 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ T+ + QAL LV+IR+ DHLIV G + S AE GLL Sbjct: 187 DRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 72/157 (45%), Positives = 103/157 (65%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 +S + P L T + V A+ L+RH R A TS A RD+LKL++ GL E F + Sbjct: 11 ESDAQRRPTLSFTERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAV 70 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L L+ +++++ ++ LF G+I + VHPREVV+ + AAAVI AHNHPSG + PSQAD+ Sbjct: 71 LLLDNRHRVLRYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADR 130 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+T++L AL L+++RV DH+IVG + SFAE G L Sbjct: 131 TLTRKLQDALALIEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 6/153 (3%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEFMML 64 L T+ AL L R ++E TS + + + M +E ++ Sbjct: 66 SIKGLGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYC-IDMQSYPQEIVRVI 124 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 +L+ + ++I + + G+I+S+ HPR++ + A+ ++ +ILAHNHPSGD TPS+ D Sbjct: 125 FLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIE 184 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 +T+++ +A +L+ I + DH+I+G + YS + Sbjct: 185 LTKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLERE 59 +S + L ++ L + R+L+E G A TS + +L KM L E Sbjct: 65 SESDFCEKKGLGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYE 124 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F + L+ Q+++I F GSI VHPR + ++ L NAAA+IL HNHPSGD + S Sbjct: 125 VFAAILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSAS 184 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +ADK ITQ++V ALQL+D+RV DHL+VG ++ SFAE+G + Sbjct: 185 EADKMITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 9/162 (5%) Query: 2 MEQSLIPQT-PVLPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGLER 58 ME + I + + T+ A L R LRE + + + D+L M E+ Sbjct: 66 MEAAEIANICKGIGMAKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEK 125 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E ++L L+ + +LI + +G+++ + HPR++++ + NA ILAHNHPSG+ P Sbjct: 126 ETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAP 185 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGG------RQIYSF 154 S+ D +T+R+ + +L+ +R DH+I+G + YS+ Sbjct: 186 SRTDDLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 ++ + + + AL L R + + +A K+ ++ Sbjct: 63 LDLEDLMNFNGIGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYEKK 122 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + LN +IA E + G ++ HPREV K A+ A++VIL HNHPSG TP Sbjct: 123 ENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTP 182 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D IT+RL+ A +++ I V DH+I+G S + G + Sbjct: 183 SDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 104/148 (70%) Query: 13 LPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 + QR ++ AL LL++ +R+ F +++ + WL L+++ LERE FM+LYL+ Q++L Sbjct: 10 VASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRL 69 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I E + G I+STEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ IT RL + Sbjct: 70 IEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDS 129 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L +D++V DHL+VG ++ SFAE G L Sbjct: 130 LSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + ALTL +R TS + A ++ M LE E F + Sbjct: 79 LTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEVFRI 138 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + LN + ++ + G I+ T VHPREV ++A+ A ++IL HNHP+GD +PSQ D+ Sbjct: 139 IILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDR 198 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+RLV+ ++V I + DH+I+G +SF + G+L Sbjct: 199 NLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLEREEF 61 S + + L + + L R R S + D L ++ ++E F Sbjct: 73 SALSSLSGMGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKKESF 132 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L L+Q+++L + GS+S T VHPRE + A+ +AAAV+ HNHPSGD PS Sbjct: 133 WVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSD 192 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D ++T+RL + +L+ IRV DH+++G S E G L Sbjct: 193 DWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 86/160 (53%), Gaps = 2/160 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLR-ETGVAFTSTQAARDWLKLKMAGLEREE 60 + + L L VK + L R ++ ++ + Q A ++LK K RE Sbjct: 73 KSVEELLKVRGLGLVKALQVKALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRES 131 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 + LYL+ N+L+ E + G++++ P++++ +A+ +A +I+AHNHP G+ +PS Sbjct: 132 LIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSN 191 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+RL +A +L+ + DHLI+ + +SF E G+L Sbjct: 192 EDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLERE 59 + + + + T+ A L R E Q + + ++ E Sbjct: 67 DIQSLCRYAGIGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 EF ++LN++ QL++ + G ++ T V R + +AL A A+ + HNHPSG+ PS Sbjct: 127 EFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QAD +TQ++ QA +L+DIR+ DH+IV + YS+ E G L Sbjct: 187 QADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLER 58 E + + + + +L R L + S + A +++K ++ +R Sbjct: 65 EVEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDR 124 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F + LN +N++I+ E + G +SS+ V+PREV K A+ +A ++ILAHNHPSG+ +P Sbjct: 125 EYFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSP 184 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+AD IT RL+ A +++DI V DHLI+G S + + Sbjct: 185 SKADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLER 58 I + + L R + + S + +M+ L++ Sbjct: 68 SLDDITSIKGIKEGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQ 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E +++LN +N +I + +F GS++++ VHPRE+ K A+ ++ +I+ HNHPSGD TP Sbjct: 128 EILKVIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D IT R+ + +++ I++ DH+I+G S E G + Sbjct: 188 SKEDINITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLER 58 + + + +K +L R L + +S+ AA LK + GL Sbjct: 70 LSIEKLMDFKGVGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLTY 129 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF +LYL+ N LI L G ++T V R V+++A+ + A A+I+AHNHP+G+ P Sbjct: 130 EEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKP 189 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S +DK +TQ+L +A +++DI++ DH+IVG + +SFA+ LL Sbjct: 190 SHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQR---TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLERE 59 + + + + + R F+S + K MA RE Sbjct: 105 DIHRLQEIEGCGPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETRE 164 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +F +L+L++++ L++ E G+I T V+PREVV RAL +A+ +IL HNHPSGD +PS Sbjct: 165 QFRILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPS 224 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 Q D ++T RL +DI + DHLI+ SF L+ Sbjct: 225 QEDISMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 M Q + + L R + T G+ +T + ++ M L+ Sbjct: 70 MTQKDFMSIHGIGRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRSLKT 129 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E+ +L + +++L+ E + G+++++ + PREV A+ + A +IL HNHPSGD TP Sbjct: 130 EQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTP 189 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T+R+ +A +L+ + + DH+I+G + S E G++ Sbjct: 190 SKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 + + Q + T+ A L R E + S++A ++L +M L+ Sbjct: 73 LSIRQLEQYKGVGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDV 132 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EE ++ LNQ +LI + G IS T V R ++K AL NA + LAHNHPS P Sbjct: 133 EEAWVMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQP 192 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D +TQR+ +A + + I DH+I+ YS+ + G L Sbjct: 193 SGPDDQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREE 60 + + + +K + L R ++ S++ + + + + L EE Sbjct: 73 IERLVEFKGIGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEE 132 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +LYLNQ N+L+ L G I+ T V R KRA A +ILAHNHPSG TPS Sbjct: 133 FWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSS 192 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D+ IT++ A VD+R+ DHLIV + +SFA+ GLL Sbjct: 193 SDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 4/159 (2%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + L R ++ +F ++ + M +E+EE Sbjct: 85 ELTAVKGIGRVKGLQLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEEL 144 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ N +N LI LF G+++++ RE+ AL ++A + L HNHPSGD +PS Sbjct: 145 HLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGE 204 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+++ QA +L+ + + DH+I+G +SF E G++ Sbjct: 205 DIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLER 58 + + T+ A L R E +S A +++ +M L+ Sbjct: 97 QTIQELTNYKGIGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDV 156 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EE +L +NQ+ +LI + G IS T V R +++ A+ NA + L HNHPS P Sbjct: 157 EEAWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFP 216 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 S D +T+R+ +A QL+ I DH+IV + YS+ E G Sbjct: 217 STEDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 65/142 (45%), Positives = 94/142 (66%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 R +++A+ LL+ + + G +A RD+L+LK+ E F+ ++LN Q+Q++A E L Sbjct: 25 RIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECL 84 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F G++S V+PR VV+RAL NA+A+I +H HPSG PS AD+ IT RL L ++DI Sbjct: 85 FKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDI 144 Query: 139 RVPDHLIVGGRQIYSFAEHGLL 160 RV DH I+G + YSFAE GLL Sbjct: 145 RVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + +K AL L R R+ + A +K ++ RE FM Sbjct: 72 ELLEVQGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENREIFM 131 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ + + LI +E + GS+S T VHPREV A+ AA++I+ HNHPSGD PS D Sbjct: 132 AIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQD 191 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ L++ +L+ I + DHLI+G SF + LL Sbjct: 192 LKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAF---TSTQAARDWLKLKMAGLER 58 + + + Q P + + ++ R DWLK ++ + Sbjct: 62 LSRQELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQ 121 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E+F++++L ++++++ LF G+I+++ V PRE+ K AL N+ +IL HNHPSG+ +P Sbjct: 122 EKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSP 181 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 SQ D ++T+R+ +A QL+ ++V DH+IV +SF + G+ Sbjct: 182 SQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 7/153 (4%) Query: 14 PLTAQRTVKRALTLLDRHLRETG------VAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P T + +K + FTS + + K + +E F+ L+L+ Sbjct: 17 PATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFKD-LIYETKEHFITLHLD 75 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +N+++ + + GS++ + VHPREV K AL NAAA+I H HPSGD PS D +IT+ Sbjct: 76 GKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSITK 135 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 RL +A +++ IRV DH++VG SF E GL+ Sbjct: 136 RLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEF 61 + P + T+ A+ L R + S A L + E F Sbjct: 81 EELMAIPGVGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATERF 140 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L L+ +++L+ + G+ + T HPRE+ + A+ NA+ +I+AHNHPSG+ +PSQA Sbjct: 141 AVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQA 200 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 D +T++++QA QL++I V DHLI+G S E Sbjct: 201 DLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 161 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLER 58 M + P + +K L R + + + Q D+ +M L Sbjct: 68 MSYEELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTN 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E + Y + +++ + + + GS+SS+ V +++ AL NA+ ++L HNHPSGD TP Sbjct: 128 EVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D +T RL++ + I + DH+I+G + YSF E+ L+ Sbjct: 188 SRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 76/131 (58%) Query: 30 RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVH 89 R R+ + S D+ K + RE+F+++ LN +N++ T+F G+I+ + +H Sbjct: 20 RKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINMSPIH 79 Query: 90 PREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGR 149 PREV + A+ + A++ILAH HPS D TPS D+ T+R + +L+ I V DH+IV Sbjct: 80 PREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHIIVTES 139 Query: 150 QIYSFAEHGLL 160 +SF E+ L Sbjct: 140 SYFSFRENNLF 150 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 9/163 (5%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + +K A TL R E G + +A D L+ + E E F + Sbjct: 81 LCKVKGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQV 140 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + LN + +LI E + G++ + +HPREV K A+ NA+A++LAHNHPSGD TPS+AD Sbjct: 141 VLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADI 200 Query: 124 TITQRLVQALQLVDIRVPDHLIVGG------RQIYSFAEHGLL 160 +T+ L++A QL+ I + DH+I+G + S E G Sbjct: 201 KVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGYF 243 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 4/164 (2%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLK-LKMAGL 56 + + + + T + L +R+ + + T + ++G Sbjct: 62 LPSYDTLLRINGIGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGK 121 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 +E F++ LN +++I T+ G ++ + VHPREV A+ AAA+I HNHPSG+ Sbjct: 122 SQEHFLVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNP 181 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D T+T++L +A +++ I + DHLI ++ S G L Sbjct: 182 EPSSEDITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 2/155 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHL-RETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + + + + + + R + TS A ++LK ++ +E + LY Sbjct: 76 LKKIKGIGEAKALQILAIIEIAKRMDDHAEKIKITSVSDAFNYLKF-LSKETQEHMVALY 134 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN N LIA E + GS++ V PR+++ A+ N +I++HNHP+ D TPSQ D Sbjct: 135 LNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEF 194 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T++L + + DH+IVG + YSFA+ GL+ Sbjct: 195 TKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + Q L + + A+ L R+L + S + LK ++E F+ Sbjct: 64 NIEKLLQIHELGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFI 122 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 YL+ N++ + G+++ + VHPREV A+ A++I+AHNHPS + TPS+ D Sbjct: 123 AFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSRED 182 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +TQ+L Q+ +++ I + DH+I S E G+L Sbjct: 183 ILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 90/147 (61%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 PL + +K A L + + +++L + +A RE F+ L+L+ QN+LI Sbjct: 25 PLDSDIVLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLI 84 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 A+E LF G+I ++PREVVK AL NAA VI+AHNHPSGD PS D+ IT RL+QAL Sbjct: 85 AYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQAL 144 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV+I + DH +VGG Q+ S A G+ Sbjct: 145 MLVEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 1/160 (0%) Query: 2 MEQSLIPQ-TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + L+ + PV + + + + + S + A LK + +RE+ Sbjct: 10 QQLELLEREVPVKQPAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREK 69 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+++ L+ +NQ A GS++S+ VHPREV K A+ N+A++I+AHNHPS D TPS+ Sbjct: 70 FVVVCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSR 129 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+RLV+A ++V I + DHLIV + S E G + Sbjct: 130 EDIEVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 71/139 (51%), Positives = 93/139 (66%), Gaps = 3/139 (2%) Query: 22 KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A L +R++R G A T+ A +++++ K+ ERE F +L L+ QN+LI + LF G Sbjct: 22 HAAEILANRYVR--GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQG 79 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 ++ + V+PREVVK L NAAAVI AHNHPSGD+TPSQAD+ IT+RL L LVD+RV Sbjct: 80 TVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVL 139 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH IV G SFAE G L Sbjct: 140 DH-IVTGDTCTSFAERGWL 157 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 83/150 (55%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P P T++ A+ L R + + ++L K+ G ++E+F +LY +QQ Sbjct: 55 PDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQ 114 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 L+ + LF G++ + VHPRE+ + A+ + A++I+AHNHPSG TPS D +T+ L Sbjct: 115 NLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLK 174 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +++ I DH I+GG + S E L Sbjct: 175 KASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 4/159 (2%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET----GVAFTSTQAARDWLKLKMAGLEREEF 61 + + P + +T +K ++ L R E G + ++ A K M L+ E Sbjct: 70 ELIKYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHL 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +Y++ +N+ ++ + G ++ PR++ K AL N+A +ILAHNHPSGD TPS+ Sbjct: 130 FCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSED 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+RL++A +++ I V DHLI+ S E + Sbjct: 190 DVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 68/153 (44%), Positives = 100/153 (65%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P L + R V RAL +L++ + A ++ + D+L+LK+AG E F +++L+ Sbjct: 15 TPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLD 74 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 QN+ IA E LF G+I+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ +T+ Sbjct: 75 CQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTE 134 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 R+ +L L+D+RV DH+IVG YSFAE GLL Sbjct: 135 RICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 71/144 (49%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 R ++ A +L++ G F T+ ++L+ K+AG E E F +L+L+ Q++LI + Sbjct: 17 EHRVLEEAAEILEQRYVR-GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFK 75 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G++ + V+PREV+K AL NAAAVI AHNHPSGD PSQAD+ ITQRL AL LV Sbjct: 76 ELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLV 135 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 DIRV DH++VG SFAE G L Sbjct: 136 DIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEF 61 + P A+ + + R + S + + ++ E EEF Sbjct: 70 EELRGVPGFGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 M ++ +N+L+ E + G++ V+PREV+ AL +NA+ VIL HNHP D PS Sbjct: 130 WMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAE 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+R+V A + +DIRV DHL+V + +SF G++ Sbjct: 190 DMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 + + + T ++ L R E ++ A +++ + E+ Sbjct: 113 IKRLKEVDGIGETCATYIQATHLLNQRCSLEEVKARPIISNWGALLSHVRIALQHETEEQ 172 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L+L+ +NQLIA E G+I+ V+PRE+ KRAL +A+A+IL HNHPSGD TPS+ Sbjct: 173 FRVLFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSR 232 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ ++ A + ++I + DHLIVG + I S L+ Sbjct: 233 ADIDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 62/156 (39%), Positives = 93/156 (59%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 L L + ++ A + R TS D+L+ MAGL REEF +L Sbjct: 68 QLHLAVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVL 127 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 +L+++NQL++ E L GS+ V+PREV++RAL N +A+ILAHNHPSGD PSQ D Sbjct: 128 FLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIE 187 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+ L++A + + I++ DH+IV G + SF +GL+ Sbjct: 188 MTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 + + + AL L R+ E + F + ++L+ K+ ++E Sbjct: 66 HPEQLKSFKGIGQAKAAKLLAALELARRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQE 125 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 + ++LYLN +NQL + G ++ V P ++ + A+ A AVI+AHNHPSGD TPS Sbjct: 126 QVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPS 185 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D T R+ +A +++ I++ DH+I+G + S L Sbjct: 186 KEDIDFTGRVKKASEILGIKLLDHIILGENKYISMKAERLF 226 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVK----RALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLER 58 + + T ++ A + +R +RE +F S + + K ++ L Sbjct: 68 SLEDLQAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSY 127 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EE +L+L+ + QL+ L GS +++ + RE+ AL + IL HNHPSGD P Sbjct: 128 EEVHVLFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHP 187 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S+ D+ T+ + +A + + I + DH+I+G Q YSF E G + Sbjct: 188 SREDERATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 80/134 (59%) Query: 27 LLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISST 86 L R + + +L +A + E+F +L+L+ +NQLIA E L G+++ Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 87 EVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIV 146 V+PREVVKRAL +A A+I+ HNHPSGD TPS D +T+ L +A +L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 147 GGRQIYSFAEHGLL 160 G SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 3/143 (2%) Query: 21 VKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 + A+ +L R E S R +L+ G E F++LYL+ QN+LI E Sbjct: 54 LACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEE 113 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 F G+++ T V+PRE+++R+L +AA VI +H HPSG PS AD+ +T L AL LVD Sbjct: 114 AFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVD 173 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 +RV DH++V G + SFAE G L Sbjct: 174 VRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 62/125 (49%), Positives = 85/125 (68%) Query: 36 GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVK 95 +S A D+LKL MA ERE F +L+L+++NQLIA E L G++ V+PREVV+ Sbjct: 129 RCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREVVR 188 Query: 96 RALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 RAL +A+AVIL HNHPSGD TPS AD +T+++V A + + I V DH+IVG ++ SF Sbjct: 189 RALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVASFK 248 Query: 156 EHGLL 160 GL+ Sbjct: 249 ALGLI 253 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHL--RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + L P + + +L + R +E T D L M+ L+ E F Sbjct: 66 EELKNDNPGMTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHF 125 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ LN +N +I E + G+I+++ VH REV + A+ NA ++ILAHNHPSGD+TPS Sbjct: 126 KVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIE 185 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T+RL A +L+ I+V DH+I+G +SF E +L Sbjct: 186 DEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLERE 59 + + + + + + R+L + + +AA +++K G + E Sbjct: 67 HPKELQKVKGVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++ L+ Q +I LF G++ V+PR+VV+ + +NA++VILAHNHP G PS Sbjct: 127 VFYVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D TQ++V AL + + V DH IV + YSFA++G+L Sbjct: 187 MDDIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 3/158 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDW---LKLKMAGLERE 59 S + + + T ++ + L R T + +++++ L +M E+E Sbjct: 65 SISELKEISGIGQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQE 124 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 YL+ QNQ+I +T+F G+ + PRE++ A+ + +++AHNHPSG+ PS Sbjct: 125 HLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPS 184 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 QADK T+++ A + I DH+IVG YSF E Sbjct: 185 QADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + + + R + + + + +E F Sbjct: 62 LKSIKGIGKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFYA 121 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 LYL+ + LI + G+++ T VH R+V + A+ A ++I+ HNHPSGD PS+ D Sbjct: 122 LYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDI 181 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TIT+ L +++ I + DH+IVG S + G+L Sbjct: 182 TITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 158 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 Q+ P + + + + L R E + S ++ + ++ +E Sbjct: 52 SQNAFCDIPGVGPQKYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQE 111 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F + LN Q++ + ++ LF+G+I++ V+PRE+VK AL +NAA VILAHNHPSG PS Sbjct: 112 RFAVALLNNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPS 171 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QAD ITQR+ QAL L+D++V DH++VG S A+ G L Sbjct: 172 QADIAITQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 1/140 (0%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 + A T+L++ L+ G S A D+L + A L E F +++L+ ++Q++A E LF Sbjct: 48 ILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHLF 106 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G+I EVHPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +T+RL +AL L+DIR Sbjct: 107 FGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIR 166 Query: 140 VPDHLIVGGRQIYSFAEHGL 159 V DHL++GGRQ S A G Sbjct: 167 VLDHLVIGGRQHISLAARGW 186 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + + + R V S Q+ ++LK + L +E F++ Sbjct: 70 ELMKHKGIGQEKAIHILANIEFARRIYATNVLDVKCDSPQSIANYLKSSLENLTQEVFVV 129 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L ++ + ++I +F GS+S + VHPREV K A+ +A++++ HNHPSGD TPS D Sbjct: 130 LDIDTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDI 189 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 T L++ ++V I + DH++V + S + Sbjct: 190 KTTINLMEVGEIVGIEMLDHIVVAKKGYVSIRK 222 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 Q L + TV A+ L R + + T ++ A + + L +EE Sbjct: 67 QELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQEE 126 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +L LNQ ++I+ E L G +S T R ++ +A+ A+A+ILAHNHPSG PS+ Sbjct: 127 MWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSE 186 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 160 D +TQR+ +A L+ R+ DHLI+G +SFA+ GLL Sbjct: 187 QDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 72/151 (47%), Positives = 98/151 (64%), Gaps = 2/151 (1%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQ 69 P+T + + A +L AFTS+QA +D+L+ K+A E E F ++ L+ Q Sbjct: 10 ISDKPMTENQILDAAAEILACKYVRK-DAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQ 68 Query: 70 NQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRL 129 +Q+I LF G+I ++ V+PREVVK L NAAAVIL HNHPSG +PS ADK IT+RL Sbjct: 69 HQMIDFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRL 128 Query: 130 VQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AL L+D+RV DH+I+G SFAE+GLL Sbjct: 129 QEALALIDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 3/163 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLE 57 M + + A L R +G + ++ Sbjct: 65 MARPDQLEAISGIGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKG 124 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 EEF +++ +N++IA E + G++ +T V PRE++ AL AAA+ILAHNHP GD T Sbjct: 125 VEEFWAAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPT 184 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D +T+R+ Q + IR+ DH+IV + YSF EHG L Sbjct: 185 PSREDLDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 3/146 (2%) Query: 18 QRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 ++ R + E +S QA +L++ +A RE+F +L+L+++NQLIA Sbjct: 99 ALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKKNQLIA 158 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E + G++ +PRE+++RAL +A++VIL HNHPSGD PSQ D +T+ + A + Sbjct: 159 DEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKANIAAGK 218 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 + I + DHLIVG + S + G + Sbjct: 219 PLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEF 61 + + + ++ + DR L + ++ ++L + RE F Sbjct: 70 EALCRIDGIGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRETF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++++ +N++I ETL GS++ + V+PREVV RAL +AAA+I HNHPSG+ PS+ Sbjct: 130 AAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQ 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++LV A + + I V +H+IVG R +SFA++G + Sbjct: 190 DIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 66/145 (45%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 +R + A +++ R + S + ++LK + A LE E F M+ L+ Q+++I Sbjct: 19 EREKRIIALAHSIIARRF-TRLDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVIN 77 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 L G+I S V+PREVVK AL NAAAVILAHNHPSG PS+AD+ IT+RL AL Sbjct: 78 AVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALD 137 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGL 159 LVDIRV DH++V G SFA G Sbjct: 138 LVDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 69/139 (49%), Positives = 97/139 (69%), Gaps = 3/139 (2%) Query: 22 KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 A L +R++R G AF++ A +++L+ K+ ERE F +L L+ Q++LI + LF G Sbjct: 22 HAAEILANRYVR--GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQG 79 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 ++ + V+PREVVK L NAAAVI AHNHPSG++TPSQADK IT RL +AL L+D++V Sbjct: 80 TVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVL 139 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DH++VG SFAE GL+ Sbjct: 140 DHIVVG-ETCVSFAERGLI 157 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + + L R + A + K + E F Sbjct: 78 EQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALESF 137 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +LYLN ++++ H + G I+ T V P+ + + AL A VIL HNHPSG+ PS A Sbjct: 138 HVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTA 197 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT++L A +L+DI V DH+IV S E G + Sbjct: 198 DIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + + R+L++ + Q D+L M GL++E F Sbjct: 84 AELLSIKGIGEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVF 143 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++YL+ Q++++ LF G+++S + PREV+ A+ NA+A+I HNHPSG PSQA Sbjct: 144 KVIYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQA 203 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 DK +T+ LV A ++ IR DH+I+G +SFA G++ Sbjct: 204 DKDVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMML 64 + + L R + F +++ A D+ ++ LE E FM+L Sbjct: 72 CSIDGIGKVKSIMFQCIGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVL 131 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 LN + +LI + L G+++ T + REV + AL A +I+ HNHPSGD TPS+ D Sbjct: 132 LLNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSL 191 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T++L +A +LV I + DH+I+G + S E ++ Sbjct: 192 CTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 227 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 9/165 (5%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEF 61 + + +++ L + + E + ++A +L +AG +EEF Sbjct: 69 EDLETIHGVGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEF 128 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 +L L+ +N+L+ + G + + VHPREV + AL + A +ILAHNHPSGD +PS Sbjct: 129 HILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQ 188 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGR------QIYSFAEHGLL 160 D T+ L++A +++ ++V DHLI+G + Q S + GL+ Sbjct: 189 DIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRETG--VAFTSTQAARDWLKLKMAGLEREEFMML 64 + + + AL R T + + L+ KM+ L +E F+++ Sbjct: 67 LLSFKGINKAKAIGIMAALEFSKRINIHTNINEVYDNPTKVFYHLETKMSHLSQEHFLIM 126 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 L+ N+LIA +TLF GS++ + V RE+ + AL FN ++I HNHPSGD PS D + Sbjct: 127 ILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDIS 186 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 +TQ+LV +++++ + DH+I+G Q YSF Sbjct: 187 MTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 1/153 (0%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLR-ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 Q LP ++ ++ L L+ + + E + + + GL++E FM+L LN Sbjct: 10 QLNALPPRRRKQAEKLLELIRKVMEGEKDHYIHTPADVFQAVATDLVGLDKEHFMILILN 69 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +N++++ E + G+++S VHPREV K A+ AA++I HNHPSGD PS DK +T+ Sbjct: 70 TKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKLTE 129 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 RL+QA +++ I V DH+++G S E G++ Sbjct: 130 RLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 3/159 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 + + + +K + L R + ++ + ++ ++ Sbjct: 64 LSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQ 123 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E + LYLN QNQ+I+ +T+F GS++ + PRE++ A+ A ++I+ HNHPSG P Sbjct: 124 EHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQP 183 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 S+ D T+ L ++ + + + + DHLIVG + YSF E Sbjct: 184 SRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%) Query: 10 TPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLYL 66 L + ++ + L R +R V +++ + + AG +E ++L+L Sbjct: 67 IRGLGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFL 126 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 + +NQ+I + + G++ S PR V + AL +A +I+ HNHPSGD +PSQAD+ T Sbjct: 127 DVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTT 186 Query: 127 QRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 R A L+ + + DHLI+G + YSFA Sbjct: 187 TRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 QR +++AL LL+ L + A TS R + +L++ E F L+L Q+ I+ Sbjct: 33 PAQQRIIEKALALLESRLINS-DALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAIS 91 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E F GSI V+PR +V+R L NAAAVIL HNHPSG + PS AD+ IT RL +AL+ Sbjct: 92 FEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALE 151 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+RV DHLIV SFA+ GLL Sbjct: 152 LIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 R + +A ++ R+ + GV S R + +++A LE EEF ++ L+ QNQL+ Sbjct: 12 QRETRILDQARDIISRYY-QRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLLH 70 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E LF G+++S VHPREV+KR L NAAAVIL HNHPSG+ PS+ D +T++L + L+ Sbjct: 71 REILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELLE 130 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 ++D+R+ DH IV G + S AE GL+ Sbjct: 131 ILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 7/165 (4%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAA----RDWLKLKMAG 55 + Q + VK AL + R L+ V T+ + A + + Sbjct: 71 SVEELLQIKGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLMN 130 Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 +E F +L L+++N+ I H + GS T V P+E++K+ +A A+IL HNHPSGD Sbjct: 131 EGKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGD 190 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +PS+ D +T++L QA +LV ++ DH+IVG Q S A L+ Sbjct: 191 PSPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + R R T S + + ++ EEF Sbjct: 70 LQAIDGIGPGIITFFRLWGEFWARTDRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWA 129 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + ++ +N+LI E + G++ V PRE++ AL A+ VIL HNHP GD PS D+ Sbjct: 130 IMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDR 189 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+++ + + +R+ DH+I+ +SF EHG L Sbjct: 190 ELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 2/160 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREE 60 + + + + + A LL+ A T+ +L++ +A + E Sbjct: 7 VKNEQGLYHVQGCVKSEEIVSTAATILLN--ELTGREALTAPTDVAQFLQMALAQEKNEV 64 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++LN ++++++ E LF+G+I V+PR VV++AL NAAAVI AHNHPSG PSQ Sbjct: 65 FAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQ 124 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD+TIT RL AL L+D+RV DH +V + S AE G L Sbjct: 125 ADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLAERGWL 164 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLER 58 + + + + L R R + +M + Sbjct: 67 KTEKELCNIQGVGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFKE 126 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E ++L L+ + +LI T+ G+I+ + + PREV +AL + A ++L HNHPSGD TP Sbjct: 127 EHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTP 186 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 S+AD +T ++++ +LV I + DH+I+G SF E GL Sbjct: 187 SKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 60/137 (43%), Positives = 89/137 (64%), Gaps = 6/137 (4%) Query: 30 RHLRETGVAFTST-----QAARDW-LKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 R +RE+ + F A D+ K+ + EEF LYL+ +N++I E + G++ Sbjct: 29 RLVRESSITFIHPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTL 88 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +++ VHPREV K A NA +++LAHNHPSG+T PS ADK +T RLV+A +L+D++V DH Sbjct: 89 NASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDH 148 Query: 144 LIVGGRQIYSFAEHGLL 160 +IVG + YSF E GL+ Sbjct: 149 IIVGDKGYYSFRESGLI 165 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 5/156 (3%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLER 58 I + + +K AL + R+ LR+ TS + A M L Sbjct: 59 SLEEISKEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLST 117 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E ++L+ + +I + + G+++ + HPR++ + A+ +NA + IL HNHPSGD TP Sbjct: 118 ETVRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTP 177 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 S D+ IT++++ + +++ I + DH+I+G +SF Sbjct: 178 SMHDRDITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 90/161 (55%), Gaps = 7/161 (4%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRET------GVAFTSTQAARDWLKLKMAGLEREE 60 + + L + + +HL A +S++ + L + + E Sbjct: 90 LQKVKGLGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNEC 149 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++YL+ QN+++ ET F GS++++ V+ RE++ +AL A+AV+LAHNHPSG+T PS+ Sbjct: 150 FFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSK 209 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGG-RQIYSFAEHGLL 160 D +T L A + V+I + +HLI+G + YSFA+HG L Sbjct: 210 NDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 74/146 (50%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Query: 18 QRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + A LL R++R G S + +DWL + AGLE E F++LYL+ Q LI Sbjct: 53 AHKLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIE 112 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 E LF G+++ T V+PREVVK AL NAAAV+LAHNHPSG +PS AD+ +TQ L +L Sbjct: 113 AEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLM 172 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 +VD+RV DH IVGG ++ SFAE GLL Sbjct: 173 MVDVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 6/164 (3%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR------HLRETGVAFTSTQAARDWLKLKMAGL 56 + + + + + +K LL + T +A +L+ K+ Sbjct: 79 DIKELEKIKGIGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYE 138 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 + E+F ++YL+ N++IA E +G++ + ++PRE+ KR + NA ++I+AHNHPSG+T Sbjct: 139 DVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNT 198 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+ D IT + + L+ + +H+I+ +SF E GL+ Sbjct: 199 CPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 4/161 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDR---HLRETGVAFTSTQAARDWLKLKMAGLERE 59 + L ++ A + R + + ++TQ +LK ++ + E Sbjct: 64 DLQSFKSIHGLGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F L+L+ Q+++IA+E LF+G+I++ V+PR +V+R L NAAA+ILAHNHPSG + S Sbjct: 124 TFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDAS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYS-FAEHGL 159 Q D IT+R+ AL LVD R+ DH+++G ++YS FAE+ Sbjct: 184 QQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + + +K + ++ + + + ++ + +A + E F Sbjct: 70 QELMEVKGVGKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++YL +N +I E L G+I + PR+VV+ AL A ++L HNHPSGD +PS Sbjct: 130 EVIYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSME 189 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D + T+ + QA +++ I V DH+IV YS + Sbjct: 190 DISFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 94/148 (63%) Query: 13 LPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 L + + A+ +L+R L + G A TS Q A D+L+L M +RE F +++L+ +++ Sbjct: 18 LTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRV 77 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 IA E LF G I + R ++ RA+ N+ A+I+AHNHPSG+T PS AD+ +T L Sbjct: 78 IAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAAL 137 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+LVD+R+ DH I+G + +SFA+ GLL Sbjct: 138 LRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLERE 59 + S + + + T+ LL R + + +S WL L++ E+E Sbjct: 71 QYSQLSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQE 130 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F +L+L+ QN LI + LF G+ + VHPR+V + A+ NA+ ++L HNHP G + S Sbjct: 131 LFRVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSAS 190 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFA 155 +AD +T+ L++ ++ I V DH+IV S Sbjct: 191 EADVEVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 4/162 (2%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETG---VAFTSTQAARDWLKLKMAGLER 58 M + L ++ LL E + ++ A +++ +M L++ Sbjct: 44 MTIVELQDI-GLSRKEALRIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQ 102 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F+ L+L+ ++++I ET+F GS++S+ PRE+++ AL ++AA +I HNH SGD+ P Sbjct: 103 EHFVCLFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEP 162 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D +T+RL +A L+ + + DH+++G + S E+ LL Sbjct: 163 SMQDLEVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEF 61 + + L + + R L + + ++ ++ D+L+L + + E Sbjct: 66 KTLAAYKGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVS 125 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 + L LN+QNQLIA L G+++ V+ RE+VK AL A ++ILAHNHP PS++ Sbjct: 126 VALLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSES 185 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D T+RL QAL LVDI + DH IV ++ S E G + Sbjct: 186 DVQFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQ 68 + + + AL L R E + +L+ RE F L+L+ Sbjct: 69 GVGRQRRYQLSCALLLATRLAEEELFERSPLKDPGSCYKYLQHHYLLQSREVFTCLFLDT 128 Query: 69 QNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQR 128 Q QL+A +F G++++ V+PRE+V AL A+A+I+AHNHPSG PS AD +T R Sbjct: 129 QRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDR 188 Query: 129 LVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 L +AL L+DI + DHLIV + S A GL Sbjct: 189 LRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 4/162 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHL----RETGVAFTSTQAARDWLKLKMAGLER 58 + + T + L R+L + + S++ D+L+ ++ G ++ Sbjct: 81 SLQELSHFHGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQ 140 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 E F +L L+ + + + + LF GS+++ + ++ AL +A +++AHNHP G P Sbjct: 141 EVFAVLCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEP 200 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S AD +T +L QA QLV+I++ DH I+ +SFAE LL Sbjct: 201 SAADLDLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 + + + + L ++ A+ L R L S+ + + ++ E Sbjct: 53 DIARLRMAAGIGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHE 112 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 E LYLN N+++ + + G + +T V R V+KRAL A +IL HNHPSG PS Sbjct: 113 ECWCLYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPS 172 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + DK +T+++ +A L DIR+ DHLI+ YSF + GLL Sbjct: 173 EQDKILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 11/166 (6%) Query: 2 MEQSLIPQT-PVLPLTAQRTVKRALTLLDRHLRETGV------AFTSTQAARDWLKLKMA 54 S + + + + + L R TST A ++ K A Sbjct: 153 QSVSELRHITKAVTKASYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFA 212 Query: 55 GLE----REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHN 110 L +EEF ++ L+ +++ I + G++ S+ VHPREV + A+ AAAV+L HN Sbjct: 213 YLAGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHN 272 Query: 111 HPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 HPSGD TPS+ D +T+RL +A +L+ I V DH++V ++ S E Sbjct: 273 HPSGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 83/147 (56%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 A R V A L R + ++ QA D+L + MA L E +LYLN QN LI Sbjct: 99 SAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQNMLI 158 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + G++ + ++ REV+++A+ AAA+IL HNHPSG PS+AD +TQ++++A Sbjct: 159 LDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVMEAA 218 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L+ + V DH+++G S GL+ Sbjct: 219 RLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Query: 17 AQRTVKRALTLLDRHLRETGVAFT---STQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 ++ +R+ + G+ S+ +++ K+ ++E + + L+ +NQ++ Sbjct: 77 KVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIGDSKQELLVCVCLDTKNQVL 136 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 + + +F G+++S VHPRE+ K AL F+ A +++AHNHPSG+ PS+ D +T+RL+ A Sbjct: 137 SEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQLTKRLINAG 196 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +++ I + DH+IVG S AE ++ Sbjct: 197 KMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLR-----ETGVAFTSTQAARDWLKLKMAGLERE 59 + + + L R E + + +++ ++ RE Sbjct: 67 EELQSIKGIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQIGFENRE 126 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +F +L+LN NQL+ E LF GSI + V+PRE++++ L + A +VI AHNHPSG+T PS Sbjct: 127 KFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPS 186 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + D +T+ + AL++ D+ + +H+IV +SF E GLL Sbjct: 187 RQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 4/160 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRH--LRETGVAFTSTQAARDWLKLKMAGLEREE 60 E+ P+T + L + V + +T+ D + +TS D + +E Sbjct: 10 EEVQAPKTRTIKLKTIKAVYQTITVNDTITDYLKPNTRYTSASQVFDTF-TFLRHETKEH 68 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F+ L+L+ +N+++ + + GS++ + VHPRE+ K AL +AAAVIL HNHP+GD TPS Sbjct: 69 FIALHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPTPST 128 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D TIT+RL +A +L+ IRV DH+I+G YSF E G + Sbjct: 129 EDLTITRRLQEAGELIGIRVLDHIIIGDN-YYSFTERGNI 167 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 91/146 (62%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + + + A A T + A D+ K K+ G E E F +++LN Q +LIA Sbjct: 28 VASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLIA 87 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + +F G+++ V+PREVVK A+ +NAAAVILAH HPS +T PSQADK IT+RL +AL Sbjct: 88 YREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLKEALD 147 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+ V DH+IVGG S AE GL+ Sbjct: 148 LIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 2/153 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYL 66 + + + TV A+ L R+ + L+ A +RE F+ + L Sbjct: 69 LRSIRGMGDSKISTVLAAMELGRRYYDNKNRTISHPTDVVPLLQ-HYADRDREHFICVSL 127 Query: 67 NQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTIT 126 N N++IA + G+I+ T VHPREV L AAA+I AHNHPSG+ PS D +T Sbjct: 128 NGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMELT 187 Query: 127 QRLVQALQLVDIRVPDHLI-VGGRQIYSFAEHG 158 +R+ +A +++ I++ DH+I V +SF + G Sbjct: 188 KRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTV---KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLERE 59 + + + A + K+A R + + + D+L++ + L +E Sbjct: 64 DLEALQNVDGVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKE 123 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F ++Y+N++ +LIA + G++ T ++ RE++KRAL + +++++HNHPS DT PS Sbjct: 124 NFRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPS 183 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +D ++T++L +A Q + I + DH+I+ +SF E+ LL Sbjct: 184 NSDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 2/143 (1%) Query: 19 RTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETL 78 + + A +LD G AF A + +L L++A E+E F ++L+ QN+LI+ E L Sbjct: 64 KIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKL 122 Query: 79 FAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDI 138 F G+I V+PRE+VKRAL NAAAVILAHNHPSG + PS AD +T+ + +L L+D+ Sbjct: 123 FYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDV 182 Query: 139 RVPDHLIVG-GRQIYSFAEHGLL 160 RV DH++VG SF E G + Sbjct: 183 RVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 + + + + + ++ + L R +R + V D+LK+K+ E Sbjct: 72 DINELRKVKDMGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIE 131 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 F++LYLN++ LIA E G++ T ++ REV+++AL A ++++HNHPSGD PS Sbjct: 132 NFLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPS 191 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +AD +T +L A +DI + DH+IV ++ YSF HGLL Sbjct: 192 KADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 2/155 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 + T + T+ A + + S + A +K + ++E F++L Sbjct: 76 ELGLTKQVAERFFATILFAKKI-NSMFMPEVECLRSPEDAYHAVKY-LTNEDQETFVVLA 133 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ ++QLI+ + ++ G+I + VHPREV + AL +AA +I+AH HPSG+ +PS+ D + Sbjct: 134 LDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEV 193 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL + + + I + DH+IVG + +S + G L Sbjct: 194 TKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLI 73 P+T + + A L L G + +A +L+ M E E F L+L+ Q+++I Sbjct: 20 PVTEKDILIMARRLAKNRLA-KGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRII 78 Query: 74 AHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQAL 133 E LF G+++ T +HPREVVKRAL NAAAVI HNHPSG+ PS+ADK IT +L + L Sbjct: 79 CFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETL 138 Query: 134 QLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+D+RV DH++VG + S AE GL+ Sbjct: 139 NLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 1/140 (0%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 + A T+L++ L+ G S A +L + A L E F +++L+ Q+ ++A E LF Sbjct: 20 ILLAAATILEQRLQRQG-RIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLF 78 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 +G+I E+HPR V KRAL NAAAVIL HNHPSG+ PS+AD+ +TQRL +AL L+DIR Sbjct: 79 SGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIR 138 Query: 140 VPDHLIVGGRQIYSFAEHGL 159 V DHL++GG++ S A G Sbjct: 139 VLDHLVIGGQKSVSLAARGW 158 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 4/157 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + + + R+L+ E S+ ++L +M GL++E F + Sbjct: 77 LQEVKGVGPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCV 136 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 ++L+ + +I E + GS++ VHPRE++ +AL +AAA+I++HNHPSG PS D Sbjct: 137 VFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDI 196 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T+ L + I++ DH+I+G SFA+HGL+ Sbjct: 197 QLTRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 + + + L R L E S A D+L+L + RE F+ L+L+ Sbjct: 126 RGIGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLFLD 185 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 +++L+ E GS++ V+PRE+V+RAL NAAA+I+AHNHPSG PS AD+ +T+ Sbjct: 186 ARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRLTR 245 Query: 128 RLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L AL LVDI++ DH +VG +SFA+ G + Sbjct: 246 VLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 90/146 (61%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + AL LLD+ + G + A +LKL++A E F +L L+ ++++++ Sbjct: 19 AREDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVLS 78 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 + LF GSI V+PR+VV +AL NAAAVI +HNHPSG + PS AD+ +T RL +AL Sbjct: 79 FDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALA 138 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LV++RV DH+IVG S AE+G + Sbjct: 139 LVEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREE 60 Q + + + +L + R+L +TG +Q +D++ + G RE Sbjct: 65 QETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPREV 124 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F +L L+ LI E LF G ISS V + V++ AL + +I+AHNHP D TPS Sbjct: 125 FAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPST 184 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 AD +T L +A L+D+ + DH+IVG + S+AE+ L Sbjct: 185 ADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 3/155 (1%) Query: 9 QTPVLPLTAQRTVKRALTLLDRHLRETGVA---FTSTQAARDWLKLKMAGLEREEFMMLY 65 LP + + A R R + +L+ M +RE+ +L+ Sbjct: 95 SIKALPEAVRVLLMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLF 154 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 LN +++L+A + + G++ T V+PRE+V RAL NA ++L HNHPSGD TPS D + Sbjct: 155 LNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVM 214 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T ++ A ++++I V DH+IV G ++ S E G L Sbjct: 215 TTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 5/165 (3%) Query: 1 MMEQS--LIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAG 55 +M + + + + R L E + D+L+ + Sbjct: 60 LMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQ 119 Query: 56 LEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGD 115 + E + L LN+QNQLIA L G+++ ++ RE+VK AL A ++I+AHNHP G Sbjct: 120 EKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGS 179 Query: 116 TTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PSQ D T+RL QA+ LVD+ + DH IV + + SF + GL+ Sbjct: 180 PEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 7/150 (4%) Query: 18 QRTVKRALTLLDRHLRETGVA-------FTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 Q + +A L + LRETG+ F + A ++ ++++ ERE F +L+ + QN Sbjct: 8 QDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLFWDTQN 67 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LI E LF G+I+ +HPRE+VK+AL N++AVIL HNHPSG TPSQ+DK T ++ Sbjct: 68 RLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKIK 127 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QA QL+D+ V DH+IV YSF H L+ Sbjct: 128 QACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 Q ++ A +L L + GV S RD+L++ +A + E F LYL+ ++++I Sbjct: 27 PEKQSLLELAFAVLH-DLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 LF G+I V+PR VV++AL NAAAV+ HNHPSG PS AD+ IT+RL +AL Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 77/143 (53%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 ++ L + + + S+ ++ K+ G +EE +YL+ +N++IA + Sbjct: 64 AVVLQLMLERVKGVNNKEIESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIAEKL 123 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 +F G+++ HPR++ + A+ +N+ A +AHNHPSGD PSQ D T++LV+A + + Sbjct: 124 IFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCMG 183 Query: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 I DH IV SF E LL Sbjct: 184 IDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 68/120 (56%) Query: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 + + +L + L RE F +L N +N L+ + G++++ V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 A +++LAHNHPSGD PS D +T+ LV QL++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALT---LLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + + T+ R D+++ M LE E+F Sbjct: 72 LLEFSGVGPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRC 131 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+LN+++ +IA E + G++ T V+PRE+++RAL A+A+IL HNHPSGD TPS+ D Sbjct: 132 LFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDI 191 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T +LV + + I + DH+IV SF LL Sbjct: 192 EMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM8_9BACT Length = 218 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 3/160 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREE 60 + + + ++ A+ L R+ E S+ A ++L + LE EE Sbjct: 57 VEDLQVVQGIGDSKAIALQAAIELGKRYSLENMAERPDLGSSLAIYNFLYPHVKDLEVEE 116 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +L +NQ +LI H + G I+ T V R +++ A+ NA + +AHNHPS PS+ Sbjct: 117 CHLLLMNQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSK 176 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 AD +T+ + +A ++ I DH+I+ +S+ + G L Sbjct: 177 ADDMLTKSVKEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLERE 59 ++ + L++R L++ S + D+LK+ M + E Sbjct: 89 DKERLLSISGTNENLYINFAIVRELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLE 148 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +F +L+LN++N LIA E L G+I V+PRE++KRAL+ A+ +IL HNHPSG PS Sbjct: 149 QFRVLFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPS 208 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +T +V + ++I V DH+I+ + +SF + LL Sbjct: 209 KAGIDMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 20 TVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 + R +TLL R + F S+ +L + G+E+E+ +++YL+ +N+++ Sbjct: 64 LLSRTITLLKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGER 123 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G+++ + VHPR++ + A+++N+ +++AHNHPSGD PSQ D T+++ +A L+ Sbjct: 124 LLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLM 183 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 I DH+IV R SF E L+ Sbjct: 184 GINFLDHIIVADRSYLSFKEEQLI 207 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 80/141 (56%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 ++ A L R G + A +L+ +A E+F +L+L++ +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 G+I T V+PREV++RA+ A+ +IL HNHP + TPS+ D +T+RL Q ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 4/156 (2%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLN 67 P P T+ A +L RH R T V S D+L L E F +L L+ Sbjct: 12 PPAPGFSEAEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLD 70 Query: 68 QQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQ 127 ++N+LI + + GSI V+ EV++ AL +A+A+IL HNHPSGD PSQAD +T+ Sbjct: 71 RKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTR 130 Query: 128 RLVQALQLVDIRVPDHLIVGGRQ---IYSFAEHGLL 160 ++V A +++DI + DHLIVG + +S G+L Sbjct: 131 KIVDACRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 9/166 (5%) Query: 3 EQSLIPQTPVLP--------LTAQRTVKRALTLLDRH-LRETGVAFTSTQAARDWLKLKM 53 I +P Q ++ A ++ R+ + + + + + + Sbjct: 58 NVEAIMMIKAMPWTQSSSFSAHDQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHL 117 Query: 54 AGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPS 113 A ++RE F L+L+ + + LFAGS++ VH REV++ L NAAAVI HNHPS Sbjct: 118 AHVDREVFGALWLDNGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPS 177 Query: 114 GDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 GD +PSQAD+ +T L L ++IRV DH++V + SFAE G Sbjct: 178 GDPSPSQADRQLTNHLKDVLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 78/150 (52%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 P + T + + L + S+ +L K+ G ++EE LY++ N Sbjct: 58 PNCSSSLAITAEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWALYVDNGN 117 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +++A + +F G+++ + HPRE+ + A+ ++ + + +AHNHPSG PS D +T+ L Sbjct: 118 RIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFELTKDLY 177 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A +++ I + DH IVG Q S E L Sbjct: 178 RAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepID=D1BNF1_VEIPT Length = 232 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 4/163 (2%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDR----HLRETGVAFTSTQAARDWLKLKMAGLE 57 M + + + T+ AL + R ++ET F+ ++ ++ + Sbjct: 69 MTVDNLIKIKGIGRDKAVTLCAALEMGRRLGELKIKETYEDFSQPFVIAQYVMERLRHED 128 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 E L +N+LI E + G + S+ V R V K+A+ NAAA+IL HNHPSGD+ Sbjct: 129 VEHVWAAMLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSR 188 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D +T+ V A Q + I V DH+++G + S +E G L Sbjct: 189 PSDEDIRLTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%) Query: 15 LTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQ 71 ++ A+ L R R+ + + + + +E ++L L+ +NQ Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLLCLDTKNQ 133 Query: 72 LIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQ 131 + +F G ++S EVHPRE++ L +++ IL HNHPSG+ PS D T+++ + Sbjct: 134 IKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMKK 193 Query: 132 ALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 L+ IR+ DHLIVG + +S AE+ +L Sbjct: 194 IGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 80/146 (54%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + + + + + L S + A + + G +RE F++L L+ +NQ Sbjct: 23 PAKRVDIVKLKMIKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPTT 82 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 GS++S+ VHPREV+K A+ NAA++I+AHNHPS D TPS D +T+RL++A + Sbjct: 83 INVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAGK 142 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 +V I V DHLIV S E G + Sbjct: 143 VVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N2U6_9FIRM Length = 225 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 2/157 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREEFMM 63 + Q + V + + R ++ A + + LK ++ ++E+ ++ Sbjct: 67 QLIQIKGIKQAKAIEVLAIIEIAKRLDKQPVAMSAIKEPRDGYELLKNQLMFEQQEKVIV 126 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L LN + ++I +T+F G + + + RE+ K AL + V++ HNHPSG+ PS D Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T+RL + +DI V DHLI+G + YSFA + ++ Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 14/170 (8%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEF 61 + L T+ A+ L R T + A L+ + L+ EE Sbjct: 95 EKKKRFAGLGDARACTILAAIELGRRLRDTPPPRRTPITCSLDAYRVLRRHLESLDHEEL 154 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 LYL+ ++I E + +G +S R ++ A+ A+A+ILAHNHP+G PS Sbjct: 155 RCLYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAE 214 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVG-----------GRQIYSFAEHGLL 160 D +T+R+ Q + +IR+ DHLI+G SFA++GLL Sbjct: 215 DMDLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADNGLL 264 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%) Query: 12 VLPLTAQRTVKRALTLLDRHLRET-GVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 L + +L L R+L ++ S + A + L + ++E F+ L L+ N Sbjct: 71 GLGEAKIPVIVASLELARRYLLDSDQPIIDSPEKAVELL-SDIRDKKQEYFVCLTLDGAN 129 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LIA + G+++++ VHPREV A+ AA++I+AHNHPSG SQADK +T RL Sbjct: 130 RLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDVTSRLA 189 Query: 131 QALQLVDIRVPDHLIVGGRQIYSF 154 +A +L+ I + DH+I+ S Sbjct: 190 EAGRLLGITLNDHIIITKTDFVSI 213 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 4/145 (2%) Query: 20 TVKRALTLLDRHL----RETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 T+ LL + RE +F S+ +L ++G +E M +Y++ +N++IA Sbjct: 61 TLSLGAELLLNRVKAIKREKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAE 120 Query: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 + +F G+++ +HPR++ + A+ +NAA LAHNHPS D TPS+ D +T+++ + Sbjct: 121 KVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSEC 180 Query: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 + IR DH IV SF E LL Sbjct: 181 MGIRFLDHFIVNTGNYLSFKEMELL 205 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 4/159 (2%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLEREEF 61 + + L A + L ++L + +T ++L++K+ G ++E F Sbjct: 70 AELLDQHGLGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETF 129 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 M+L+LN QN L+ + + G++ V+ REV+++A+ A AVILAHNHP+G PS A Sbjct: 130 MVLFLNAQNHLLCFDVIP-GTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPA 188 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T + Q LQ V I + DH+IV +SFA +L Sbjct: 189 DIKLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTA---QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + R ++ A +R + Q D+L ++A E+F Sbjct: 59 ELESISDMGMHMLPMIRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFR 118 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+LN++N LIA E G+++ T V+PREV +RA+ A A++L HNHPSGD TPS+AD Sbjct: 119 ILFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEAD 178 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T ++ AL++V + + DH I+G + SF LL Sbjct: 179 LQMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 +++A ++++ G ST+A R++LK K+A LE E F +L L+ Q++++A+E Sbjct: 10 EDLILQQAQSIIENRYIR-GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYE 68 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 LF G++++ ++PRE+VK +L +NA A+IL HNHPSG+ PS ADK IT +L L L+ Sbjct: 69 ELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLL 128 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 D++V DHLIV G Q+ S AE GL+ Sbjct: 129 DVQVLDHLIVAGTQVVSLAERGLV 152 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 3/150 (2%) Query: 14 PLTAQRTVKRALTLLDRHLRETGVAFTS---TQAARDWLKLKMAGLEREEFMMLYLNQQN 70 ++ + A+ L + + L + L +E+ +L L+ Q+ Sbjct: 57 GNRQRQALLTAIELGRWAEKAPRPILGEVLASSQLGQVLMDDLRYLLQEQLEVLALDAQH 116 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 ++I +T+F G+++S VHPRE+ + A+ AA VI+AHNHPSG PS +D+ QRL Sbjct: 117 RIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPSTSDRAFMQRLA 176 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QL+ I + D +VG +SF E G+L Sbjct: 177 ACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 82/138 (59%) Query: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 V A + L + A + + + K++G+ E +LYLN Q ++I + + Sbjct: 38 VLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSH 97 Query: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 G+++ V+PRE+VK AL +AAA+I++HNHPSG PS+AD +T+ L AL LVD+R+ Sbjct: 98 GTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRL 157 Query: 141 PDHLIVGGRQIYSFAEHG 158 DH+IV G+ S AE G Sbjct: 158 VDHIIVTGQNTTSLAERG 175 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 3/157 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREE 60 + + T+ A+ L R T + LK M+ L +E Sbjct: 56 VEDLLTIYGISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEH 115 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 ++L L+ + L+ +ET++ G+ SS +V +++ K A+ A +I+ HNHPSGD+TPSQ Sbjct: 116 LIVLCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQ 175 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 AD +T+ + A +++ I + DH+I+G + +S+ Sbjct: 176 ADDKLTKLIKNAGEVLSIELIDHIIIGRNEFFSYRRQ 212 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%) Query: 2 MEQSLIP---QTPVLPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGL 56 ME + L + ++ A+ L R A S+ + + + Sbjct: 54 MEIEGLCLSDVLETLTPSRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDI 113 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 EE +L LN ++LI + G I++ V R ++K+ALY+NA + I+ HNHPSG Sbjct: 114 ATEEMWVLLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGAR 173 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS AD +T+ + +A + +DIR+ DH+IV G YS+A+ G L Sbjct: 174 KPSSADDRLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Query: 37 VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKR 96 AFTS + + L + +E FM L+L+ +N+L+ + + GS+S++ VHPREV K Sbjct: 45 EAFTSPRKVAEML-AFLKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKS 103 Query: 97 ALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 AL +AA ++L HNHPSG T PS D+ +T RLV+A +++ I V DH+I+G +SFAE Sbjct: 104 ALLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILGDG-FFSFAE 162 Query: 157 HGLL 160 GLL Sbjct: 163 QGLL 166 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 4/163 (2%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV---AFTSTQAARDWLKLKMAGLE 57 + + +P ++ + L R ++ + + + Sbjct: 58 LSQNEKRKIFKNIPDATVA-LEAGIELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEP 116 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 +E ++L L+ +NQ+ +F G ++S EVHPRE++ L +A + +L HNHPSG+ Sbjct: 117 QEHLLVLCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIE 176 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS D T+++ + L+ IR+ DHLIVG + +S AE + Sbjct: 177 PSTNDLAFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 2/144 (1%) Query: 17 AQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 Q V A +L RHL + TS QA D+ L + G + E F +LYL+++N+LI+ E Sbjct: 21 EQAVVYEARQILLRHLNQN-PVLTSWQAVLDYCALTIRG-DVERFHVLYLDRRNRLISDE 78 Query: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 L G++ V+PREV++R L NA+A+I+ HNHP+GD PS AD +T+ + A + Sbjct: 79 CLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEIRNASASL 138 Query: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 + + DH+I G + S G L Sbjct: 139 GVILHDHIITGAGRETSLRARGEL 162 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 79/119 (66%) Query: 42 TQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFN 101 + A + +K + ++R+ F+++ L+ +NQ A GS++++ VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 102 AAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A+VI+AHNHPS D TPS+ D +T+RL++A +++ I + DH++VGG + S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 1/141 (0%) Query: 20 TVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLF 79 + A ++++ +R T A TS A + ++ ERE F +L L+ Q++LI Sbjct: 26 ILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKFVEHS 84 Query: 80 AGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIR 139 GSISS V+PREV+K L++NAAAVI AHNHPSG PS AD+ IT RL AL+L+D++ Sbjct: 85 VGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELIDVK 144 Query: 140 VPDHLIVGGRQIYSFAEHGLL 160 V DH ++G + SFA+ G + Sbjct: 145 VLDHFVIGVGETVSFAKRGWI 165 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 4/158 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR----ETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + TA + L R+ RD+L MAG E F Sbjct: 78 LATVEGMGETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFY 137 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L L+ Q +L+ + G+I VHPR+VV+ + AA VILAHNHPSG+ SQ D Sbjct: 138 VLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDD 197 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T L+QAL +D++V DHLI+ G +++SFA G++ Sbjct: 198 ILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLER 58 M + + + + + V AL L R RE G+ + ++ Sbjct: 83 MPLAALTRIRGVGVARAAAVHAALELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPV 142 Query: 59 EEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTP 118 EEF + L+ Q++L + G ++S+ VHPREV + A+ AAAVIL HNHPSGD TP Sbjct: 143 EEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTP 202 Query: 119 SQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 S D+ +T++LV A +L+DI V DH+IVG + SFAE GLL Sbjct: 203 SAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTL---LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + + + + A+ L LDR + A +L+ + ERE FM Sbjct: 87 ELREVIGIGDAGATALAAAVELHRRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFM 146 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 ++ L+ + +++ T+ GS++ EVHPREV + + A +L HNHPSGD PS+AD Sbjct: 147 IIGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEAD 206 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +T R+ + + I V DH++V S AE GL+ Sbjct: 207 IELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 74/137 (54%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 ++ L+D + + A L + ++RE F +L L Q+I G++ Sbjct: 3 SIRLVDDPPIYSEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTL 62 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 +S + PRE+ K ++ NAA+VIL HNHPSGD TPS+ D +T+RLV +L+ I V DH Sbjct: 63 NSCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDH 122 Query: 144 LIVGGRQIYSFAEHGLL 160 +I+G S E ++ Sbjct: 123 VILGKETYLSMKEANMM 139 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 4/160 (2%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGLERE 59 M + + P++ ++ A + L E TG T+ L+ +M+ LE+E Sbjct: 43 MSEEELT--PLVGRAHAIRLRTAFAIGHAKLAEAVTGEPITTPMQVVALLQAEMSHLEQE 100 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 E ++ L+ Q +I T+ G++++ ++ + L NAA+VILAHNHPSG S Sbjct: 101 ELRVISLSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWAS 160 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 D +T++ +QA QL++I + DHLI+G S E L Sbjct: 161 PEDILLTKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 73/119 (61%) Query: 42 TQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFN 101 ++ L A LE+E+ +L L+ +NQ+I + +F G+++S PRE++K AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 102 AAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 A V++AHNHPSGD TPS+ D T+RL A +L+ + + D I+G +SFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 15 LTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIA 74 + V+RA+ +L+R + G S + R +L+L++ G E F ++L+ Q Sbjct: 62 RDEDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ----- 116 Query: 75 HETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQ 134 LF G++++ ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L AL Sbjct: 117 WRALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALN 176 Query: 135 LVDIRVPDHLIVGGRQIYSFAEHGLL 160 LVDI + DH ++G + +SF + LL Sbjct: 177 LVDIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%) Query: 10 TPVLPLTAQRTVKRALTLLDRH----LRETGVAFTSTQAARDWLKLKMAGLEREEFMMLY 65 L AQ R + V + A +LK K+A ++E F+ L+ Sbjct: 67 IKGLGEEAQMFFGAIREFFARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALF 126 Query: 66 LNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTI 125 L+ +L+ E LF G++ V+PRE+ +RA+ A VI+AHNHPSG+ +PS+ D T+ Sbjct: 127 LDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITL 186 Query: 126 TQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 T +L++AL +DI + DH+I+ + YSF ++ Sbjct: 187 TDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221 >UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLS9_FIBSS Length = 233 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 2/155 (1%) Query: 1 MMEQSLIPQTPVLPLTAQRTVKRALTLLDR-HLRETGVAFTSTQAARDWLKLKMAGLERE 59 + + + L + L L R L + + + + M +E Sbjct: 66 VPTLARLKSIRGLGKVKAAQILACLELSGRFILSDKAIPVAVPEDVLSRVAY-MKYESQE 124 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 +++ LN N +I L G ++ T VHPRE A+ A +VI HNHPSG PS Sbjct: 125 HLVVISLNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPS 184 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 D +IT+ L + +++ I V DH+I+G S Sbjct: 185 PEDMSITRVLCASGKILQIPVLDHIIIGKSGFTSL 219 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 80/103 (77%), Positives = 92/103 (89%) Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 R EF +LYLN QN+LIA ETLF G+I+ TEVHPREV+KRALY NAAAV+LAHNHPSG+ T Sbjct: 158 RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 217 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS+AD+ IT+RLVQAL LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 218 PSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%) Query: 14 PLTAQRTVKRALTL-LDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 + A + A L L R + + QA D+L+ MA E +L+LN +N L Sbjct: 83 GVVAALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNVL 142 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 + E + GS+ V+ RE+++RAL +AA+I+ HNHPSGD PS+ D +T+ L+ A Sbjct: 143 VRDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAA 202 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 + + I + DH++VG R S GL+ Sbjct: 203 AKPLGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 5/160 (3%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTST----QAARDWLKLKMAGLEREE 60 + + L + +K ++L+ +L + A + + ++L +K+ L+ E Sbjct: 60 KELLRVKGLNDKKIKLIKSIPSILEYYLLSSLKA-DTPNFKKRDLINYLIIKLGKLKFET 118 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 F ++ L+ + I+ E +F G+I S ++PR++V+++L ++ VI++HNHPSG PS+ Sbjct: 119 FSIVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSK 178 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D IT L +A ++VDI++ DH+I+ YSF E G+ Sbjct: 179 EDINITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 51/130 (39%), Positives = 83/130 (63%) Query: 31 HLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHP 90 R + + ++LK+ ++ EEF +L+LN N+LIA +TLF G+I + V+P Sbjct: 25 IKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYP 84 Query: 91 REVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQ 150 R V++ L +N+A VILAHNHPSG+ PS+ D +T+ L + L+ +++ V DH+I+G + Sbjct: 85 RVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDE 144 Query: 151 IYSFAEHGLL 160 +SF E GL+ Sbjct: 145 YFSFREEGLI 154 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%) Query: 8 PQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGL---EREEFMML 64 P+T P +V R + D+ ++ + + + A+ +K + +RE+F +L Sbjct: 22 PKTNTKPSKKFISVYRVSLVRDKGIKFGRESLSGPKQAQKIMKSLIEMQGQPDREQFCIL 81 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 LN +N++I + GS+SS VHPREV+K A+ N++A+IL HNHPSG TPS D Sbjct: 82 MLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDIA 141 Query: 125 ITQRLVQALQLVDIRVPDHLIVG--GRQIYSFAEHGLL 160 IT+R++QA ++ I V +HLI+ YSF+E+GL+ Sbjct: 142 ITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 79/126 (62%) Query: 35 TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVV 94 + + +LK + +ERE F +LY N +N LI E +F G+I + V+ RE+V Sbjct: 86 EEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIV 145 Query: 95 KRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154 K L +NA ++I+ HNHPSG+ PS D+ +T++++ L+L+D+R+ DH+I+ + YSF Sbjct: 146 KNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSF 205 Query: 155 AEHGLL 160 E+G + Sbjct: 206 LENGQI 211 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 1/138 (0%) Query: 22 KRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAG 81 + A+ ++++ + + A + ++ ++RE F ++ L I + G Sbjct: 7 QVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINMNIVSVG 66 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 S++ ++PRE+ K A+ NA +++L HNHPSG+ TPS +D T R+ + +L+ I + Sbjct: 67 SLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGELMGISLV 126 Query: 142 DHLIVGGRQ-IYSFAEHG 158 DH+I G YSF + G Sbjct: 127 DHIITGRNGNYYSFRDKG 144 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 5/148 (3%) Query: 18 QRTVKRALTLLDRHLRETG-----VAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQL 72 Q +++A +L + + E FT A+ + + + ERE F++L+L++ ++L Sbjct: 9 QAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRL 68 Query: 73 IAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQA 132 I E +F GS+S T V RE++++AL NA+A+I+ HNHP+G+ PS ADK IT+RL +A Sbjct: 69 IKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEA 128 Query: 133 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +L+DI++ DH IV G + F ++ L+ Sbjct: 129 CELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 86/150 (57%) Query: 11 PVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 + + + L G ++ A+ +L+L++AGLE E ++ L+ Q Sbjct: 25 GAMRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQL 84 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 +LI + F G++S V+PRE++K AL NAA +++AHNHPSG SQAD+ +TQ + Sbjct: 85 RLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQ 144 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 QAL L+D+R+ DH IV G + S A+ G L Sbjct: 145 QALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB45_9FIRM Length = 241 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRHL---RETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + P + R ++ L R R + T T++ + ++ + E + Sbjct: 84 ELMLIPGIGPVKARELQSVFELSRRIASNTRRRKLKLTETKSIAGYYMERLRHEDSELLV 143 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 Y N +++L+ + GS T+ R++ AL A+ ++L HNHPSGD TPSQAD Sbjct: 144 AAYFNVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPSQAD 203 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TQ A Q ++I + DH+I+G Q YSF + L+ Sbjct: 204 YLATQEAKMAGQYLEIALRDHIIIGDHQYYSFRQGELI 241 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 1/153 (0%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMML 64 I + + + A + R ++ G+ L A ++E F+ + Sbjct: 69 QDIMAVDGIGMAKAAAICAAFEFVRRRVKPQGLKIKFPADVLP-LIHHYADRKQEHFLCV 127 Query: 65 YLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKT 124 +N N++++ + G I+ T+VHPREV L A+AVI+AHNHP GD PS+ D Sbjct: 128 SINGANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQ 187 Query: 125 ITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEH 157 +T++L A Q + + DH+I YSFAE Sbjct: 188 VTRQLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 5 SLIPQTPVLPLTAQRTVKRALTLLDRHLRET---GVAFTSTQAARDWLKLKMAGLEREEF 61 + + + + + + R+L + R +L+L + G E F Sbjct: 103 AELKEVHGIGEGGALFLTLIRQVEVRYLASDLPGRQLLYRPERVRAYLRLLVQGRGMECF 162 Query: 62 MMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQA 121 ++ +QQ++L+ + LF G++ T V+PR ++KRAL +A +IL HNHP G S Sbjct: 163 GAMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNE 222 Query: 122 DKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D +T+R+ +A +++++ DH ++ +++ SF EHG Sbjct: 223 DIELTRRMAEACAPLELKILDHFLIADKEVLSFREHGWF 261 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 2/138 (1%) Query: 25 LTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSIS 84 + L+ + S QA + + +++ +RE F +L + Q+I + G+I+ Sbjct: 20 IRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVINMNLVSVGTIN 79 Query: 85 STEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHL 144 ++ V PREV K ++ NA+A+I HNHPSG+ PS+ D +T++L + QL+ I + DH+ Sbjct: 80 ASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCGQLLGIELLDHI 139 Query: 145 IVGG--RQIYSFAEHGLL 160 IVGG ++ SF E +L Sbjct: 140 IVGGTNGKMLSFREEKML 157 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 3/160 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLERE 59 + + + + L +K AL L R E + + +MA LE+E Sbjct: 97 DLASLRRFHGLGEAKAAKLKAALELGRRLALAQPEERPVIRTPEDVYAIAGAEMATLEQE 156 Query: 60 EFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPS 119 + ++ L+ +N+++ T+ G ++ +V E+ + A+ N A++L HNHPSGD TPS Sbjct: 157 QLRVVLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTPS 216 Query: 120 QADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGL 159 + D +T+ V+A L+ I V DHL++G + S GL Sbjct: 217 RQDIELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 2 MEQSLIPQTPVLPLTAQRTVKRALTLLD----RHLRETGVAFTSTQAARDWLKLKMAGLE 57 + + + + +K +++ + + ++ TS ++LK + + Sbjct: 78 QSEEELQKNKYMTERTVVFLKLLSEIIENGLYKKIHNKKISITSNIKLLNYLKCSLLKRD 137 Query: 58 REEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTT 117 E F +L+LN QN+L+ E LF G+I + ++ RE++K+ L +NA +VIL HNHP+G Sbjct: 138 IEVFKVLFLNTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLK 197 Query: 118 PSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 PS +D +T+++ + + ++IR+ DHLI+ + +SF E G+L Sbjct: 198 PSDSDILLTKKVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C7GIB3_9FIRM Length = 179 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%) Query: 24 ALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSI 83 ++ L+ + F + + M +RE ++ L + I GS+ Sbjct: 13 SVRLVKDAPIYSEHTFNNPADIAAVMGDCMCQFDREVVCVVNLRSDLKPINVHFASVGSL 72 Query: 84 SSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDH 143 + HPRE+ K ++ NAA+++L H HPSG+ PS+AD +T R+ + +L+ I + DH Sbjct: 73 NEAMAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMNKLCELMGIPLIDH 132 Query: 144 LIVGGR--QIYSFAEHGLL 160 +IVGG + +SF E G++ Sbjct: 133 IIVGGDNREFFSFREKGMI 151 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 35 TGVAFTSTQAARDWLKLKMA--GLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPRE 92 T + + + E F + LN +N++I + GSI+S+ VHPRE Sbjct: 23 ERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKNEIIGCSIVSQGSINSSVVHPRE 82 Query: 93 VVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIY 152 + A+ NAA+++ HNHPSG+ S D+ +T+RL + +++ I + DH+I+G + Sbjct: 83 TFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLAECGKILGIELLDHVIIGEHRFV 142 Query: 153 SFAEHGLL 160 S E G + Sbjct: 143 SLREKGCI 150 >UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio RepID=B8J197_DESDA Length = 229 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 3/154 (1%) Query: 6 LIPQTPVLPLTAQRTVKRALTLLDRH---LRETGVAFTSTQAARDWLKLKMAGLEREEFM 62 + P R+ + QA + ++AG EE Sbjct: 72 ELLAVPGFGPGLMTFFTALRETYSRYTDSAVRKREVLATPQAVARMAQSRLAGCPHEECW 131 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 + ++Q+N+L A E L G ++ V PR+V + AL A+ +I+ HNHP G+ PS+AD Sbjct: 132 LALVDQRNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEAD 191 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAE 156 KT T L + + +R DH+IV YS + Sbjct: 192 KTFTAELQRLAPQLGLRFLDHVIVTEGDCYSITQ 225 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 4/156 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLRETGVA----FTSTQAARDWLKLKMAGLEREEFM 62 + L + L R +RE F + RD+L ++ G E F Sbjct: 67 LQAVRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFG 126 Query: 63 MLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQAD 122 +L+LNQQ+ IA E L AG+ + V R+++ AL+ +AAAVILAHNHP+G PS D Sbjct: 127 VLFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAED 186 Query: 123 KTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + +T+ L AL L+DIR+ DH IV G ++ S E G Sbjct: 187 RDVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 T AAR L+ ++A RE F +LN N +IA E LF G+ISS VHPR V++RAL Sbjct: 28 ITGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRAL 87 Query: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 + NAAAV+LAHNHPS +TTPSQADK IT+RL Q L +VD++V DHLIVGG IYSFAEHG Sbjct: 88 HHNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHG 147 Query: 159 LL 160 L+ Sbjct: 148 LI 149 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 V R ++ S + + +RE F ++ LN +N ++A Sbjct: 4 ILEVVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVAVHR 63 Query: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 GS++S+ VHPREV K A+ N A+VILAH HPSGD PS D +T+RLV+A +L+ Sbjct: 64 CHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLG 123 Query: 138 IRVPDHLIV-GGRQIYSFAEHGLL 160 I V DHLIV S E G + Sbjct: 124 IEVLDHLIVNSDNSFTSLKERGYI 147 >UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter RepID=Q2IG79_ANADE Length = 235 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 4/155 (2%) Query: 7 IPQTPVLPLTAQRTVKRALTLLDRHLR---ETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + P + + + A L R G + + L+ A ERE F + Sbjct: 78 LASWPGIGVARAAALAAAFELGRRGAWSPPRRGERCLDPRTVHELLRHA-AHAEREGFHV 136 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 + L+ + +L+ + GS+S V PR+ ++ A+ A V+ HNHPSGD TPS D Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDV 196 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 +T RL A LV + DH+IV YSF E G Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRET--GVAFTSTQAARDWLKLKMAGLEREE 60 E + + +A + L+R L+E Q ++L + + ERE Sbjct: 60 EMDDLKVIEGVTDSAVAMIMCVKETLERVLKEKLKSEPIMDLQGIVEYLNVSIGHSEREC 119 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 +LYLN++ QLI E+ + G + V+ +E+ ++AL NA ++I++HNHP G PS+ Sbjct: 120 VKILYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSE 178 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 D+ +T+ L A V +++ DH+I+ +SF E+GLL Sbjct: 179 EDQAVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 10/164 (6%) Query: 7 IPQTPVLPLTAQRTVKRALTL----------LDRHLRETGVAFTSTQAARDWLKLKMAGL 56 + L + +K L + + + + ++ +L+ K+ Sbjct: 69 LSTIDGLGKNSITFLKLLGELPSIIYKDELKNKKLIDKETLKISNKDILLKYLRNKIGYE 128 Query: 57 EREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDT 116 E E+F ++YL+ N++I E G++ + V+PRE+ K+ + NA ++ILAHNHPS + Sbjct: 129 EIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNI 188 Query: 117 TPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 TPS++D +T + + L+ + +H+I+ +SF E GL+ Sbjct: 189 TPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 2/150 (1%) Query: 13 LPLTAQRTVKRALTLLDRHLRE--TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQN 70 L +R A+ + R L + ++ + ++ + L EEF ++ +NQ Sbjct: 47 LTPGRRRVAVAAVEMYKRQLSQQVERRQIRMSKDVYELMEPLIGDLPNEEFWVVSINQAG 106 Query: 71 QLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLV 130 ++I + G I T R +++ + A HNHPSG++ PS DK +T++L Sbjct: 107 RIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLTEQLK 166 Query: 131 QALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 +A L +IR+ DH+I+ YSF + GL+ Sbjct: 167 KAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 78/132 (59%) Query: 29 DRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEV 88 ++ L+ + + +K + ++RE +++ L+ +N++ + G+++S+ V Sbjct: 14 EQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIV 73 Query: 89 HPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGG 148 HPREV K A+ N A++ILAHNHPSGDT+PS+ D IT R+ + L+ I + DH+I+G Sbjct: 74 HPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLMGIELLDHVILGD 133 Query: 149 RQIYSFAEHGLL 160 + S G++ Sbjct: 134 EKFISLKNEGII 145 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 3/139 (2%) Query: 25 LTLLDRHLRETGVAFTSTQAARDWLKLKMAGLE---REEFMMLYLNQQNQLIAHETLFAG 81 + L + ++ S++ A +L +E F +L+LNQ +Q++ + + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 82 SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVP 141 I+ T V R +++ AL N+ A+ILAHNHPSG+ PS+ D IT+++ A QL+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 142 DHLIVGGRQIYSFAEHGLL 160 DHLI+ YSFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPN1_METLZ Length = 247 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 4/158 (2%) Query: 3 EQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGV--AFTSTQAARDWLKLKMAGLEREE 60 E + + + + AL L R + ++ + +E Sbjct: 90 EVNDLCGVNGMGEAKACQIIAALELARRFPPPVHRFAVIHKAEDVLPFVH-QYRYDTQEN 148 Query: 61 FMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQ 120 + + L+ ++++ + G ++ +++HPREV A+ AAA+IL HNHPSG+ PS+ Sbjct: 149 VISVTLSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHPSK 208 Query: 121 ADKTITQRLVQALQLVDIRVPDHLIVGG-RQIYSFAEH 157 D IT+ + A +L+ I++ DHLI+G YS + Sbjct: 209 QDLKITKEMQAAGELLGIKLLDHLIIGPTDGFYSIVDE 246 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Query: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + P +P V + R L FT A + + +RE ++ Sbjct: 15 VEGMMRRP-IPKKKVGIVHLQMVREGRAL-YGMTRFTDPGMAAEMVWPLFEMADREMALV 72 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L LN + + A E G +++ + R++ K A+ NAA +I HNHPSGD PS D+ Sbjct: 73 LSLNTKLEPQALEIAAVGGLNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDR 132 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGR-QIYSFAEHGLL 160 +T+RL + +++ I + DH+IVG YSF E G+L Sbjct: 133 KLTKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQGML 170 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 7 IPQTPVLPLTAQRTVKRALTLLD---RHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 + + ++ + R + S ++ D+L+L + E + Sbjct: 80 LRSVNGVSDAVVALIRTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRV 139 Query: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 L+LN++ LI G+ T + RE++K+ L A+A+++AHNHPSG+ PSQ D Sbjct: 140 LFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDL 199 Query: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 IT +L + Q VD+++ DH IV +SF +GLL Sbjct: 200 LITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 236 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.162 0.445 Lambda K H 0.267 0.0497 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,067,219,821 Number of Sequences: 3077464 Number of extensions: 48283505 Number of successful extensions: 123506 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1125 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 122062 Number of HSP's gapped (non-prelim): 1166 length of query: 160 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 42 effective length of database: 677,255,604 effective search space: 28444735368 effective search space used: 28444735368 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.2 bits)