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| Job Description | P0CF92 | | Confidence | 3.52% | Date | Thu Jan 5 11:31:51 GMT 2012 |
| Rank | 80 | Aligned Residues | 49 |
| % Identity | 18% | Template | c3cqcB_ |
| PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:nuclear pore complex protein nup133; |
PDBTitle: nucleoporin nup107/nup133 interaction complex
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| Resolution | 2.53 Å |
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296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
Y | S | A | E | Q | V | A | D | C | Y | R | L | R | W | Q | I | E | L | A | F | K | R | L | K | S | L | L | H | L | D | A | L | R | A | K | E | P | E | L | A | K | A | W | I | F | A | N | L | L |
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| Template Conservation |   |
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| Template Sequence |   |
L | T | A | P | Q | L | I | G | L | Y | I | C | E | E | N | R | R | A | N | E | Y | D | F | K | K | A | L | D | L | L | E | Y | I | D | I | N | I | N | D | L | K | L | E | I | L | C | K | A | L |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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1026 | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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