210 d2v1pa1 Probab=99.86   E-value=1.9e-20  Score=137.02  Aligned_columns=380  Identities=17%

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC------CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             98757863345899999875517997378755799------833798999999999835842468983379899999999
Q batch____        12 RIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNP------DGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISR   85 (412)
Q Consensus        12 r~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p------~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lreaia~   85 (412)
                      +++..++.......+........|.+..+|..++.      |-.+.| +.+++..++..++-. |+...+..+|.+++++
T Consensus         8 ~~~~~e~~~~~~~~~re~~~~~~g~n~~~l~~~~~~iDl~sDt~t~~-~~~~~~~am~~GD~~-Yg~d~t~~~Lee~~a~   85 (465)
T d2v1pa1           8 RIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGA-VTQSMQAAMMRGDEA-FSGSRSYYALAESVKN   85 (465)
T ss_dssp             CCCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCTTCSC-CCHHHHHHTTSCCCC-SSSCHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC-CCHHHHHHHHHHCHH-CCCCCCHHHHHHHHHH
T ss_conf             65443033136224689999980998667775661798412777776-889999988721000-1578668999999998


Q ss_pred             HHHHHCCCCCCCHHCEEECCCCHHHHHHHHHHHCCCCC---------EEEEECCCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             99887078997300189849806999999985104897---------999848960899999997048148976077567
Q batch____        86 WYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGD---------TVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD  156 (412)
Q Consensus        86 ~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd---------~Viv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~  156 (412)
                      .+.         .+.++.+++++++..+++.+++++||         .++.....|......+...|..++.++.+....
T Consensus        86 l~G---------~e~~l~~~sGt~An~~a~~~~~~~g~~v~~~~~~h~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  156 (465)
T d2v1pa1          86 IFG---------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFD  156 (465)
T ss_dssp             HTC---------CSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTC
T ss_pred             HCC---------CCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCHHHHHCCCEEEEECCCCCCC
T ss_conf             709---------98399859989999999999734572765037663133045542100013665592687622654344


Q ss_pred             --------CCCCHHHHHHCCCC----CCEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEECCCCC-------C
Q ss_conf             --------77456889850689----86899727899867-6315699999999999867948997033365-------5
Q batch____       157 --------FFNELERAIRESYP----KPKMMILGFPSNPT-AQCVELEFFEKVVALAKRYDVLVVHDLAYAD-------I  216 (412)
Q Consensus       157 --------~~~~~~~~~~~~~~----~~~~i~~~~p~NPt-G~~~~~~~l~~l~~~a~~~~~~ii~De~y~~-------~  216 (412)
                              ...+.++++..+.+    ...++++.++||.+ |.+++.++++++.++|++||+.++.|.+...       -
T Consensus       157 ~~~~~~f~g~ld~~~l~~~i~~~~~~~~~~i~i~~~~n~~gG~~~~~~~l~~i~~~~~~~g~~~~~D~ar~~~~~~~~~~  236 (465)
T d2v1pa1         157 TGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ  236 (465)
T ss_dssp             TTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCC
T ss_conf             45566776788989999986305532353399841627668342788999999999998499899970054001110122


Q ss_pred             CCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHH
Q ss_conf             468744586566367678459987653000010143211348999998878776530058------67699999999861
Q batch____       217 VYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG------TFTPLQVAAIAALE  290 (412)
Q Consensus       217 ~~~~~~~~s~~~~~~~~~~v~~~~s~SK~~~~~g~r~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~q~a~~~~~~  290 (412)
                      .-.+....+............-+.++|+....+...+|++...++.+.............      .......+.+.+..
T Consensus       237 ~~~g~~~~~~~~i~~~~~~~aD~~s~s~~K~~~~~~GG~i~~~d~~~~~~~~~~~~~~~~~~~~~~ggl~~~~~~a~a~g  316 (465)
T d2v1pa1         237 REAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLVVQEGFPTYGGLEGGAMERLAVG  316 (465)
T ss_dssp             HCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHCCCTTSSCCCCCCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             44685667602221200245767897054478766617998288889999998642167766665333436899999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCH-----HHHHHHHHHHCCEEEECCHHC-
Q ss_conf             10778999999999999999999985798896468740899986665679998-----999999998579599816111-
Q batch____       291 GDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGS-----LEFAKKLLNEAKVCVSPGIGF-  364 (412)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~~g~~~~~~l~~~~~~~~~-----~~~~~~ll~~~gV~v~pg~~F-  364 (412)
                      ..+...+.+........+++.+.|++.|+  ..|.+|++++++..........     ..+..+++.++||.+.....+ 
T Consensus       317 l~~~~~e~~~~~r~~~~~~l~e~L~~~g~--v~p~ggh~v~id~~~~~p~~~~~~~~~~a~~~~l~~~~GIr~~~~~~~~  394 (465)
T d2v1pa1         317 LYDGMNLDWLAYRIAQVQYLVDGLEEIGV--VQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFL  394 (465)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHTTC--CCEECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHH
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCHHH
T ss_conf             88741799999999999999998984797--5556862446500112664444443278999999876196301000000


Q ss_pred             ----------CCCCCCEEEEEECC---CHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             ----------87889779999049---98999999999999999548882112
Q batch____       365 ----------GDYGDTHVRFALIE---NRDRIRQAIRGIKAMFRADGLLPASS  404 (412)
Q Consensus       365 ----------~~~~~~~iRis~~~---~~e~l~~~l~rL~~~l~a~~~~p~~~  404 (412)
                                .......+|+++..   ++|+++..++.|+++++..-.++..+
T Consensus       395 ~~~~~~~g~~~~~~~~~vRl~ipr~~~t~e~iD~vadai~~v~~~~~~i~~l~  447 (465)
T d2v1pa1         395 LGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLT  447 (465)
T ss_dssp             HCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTGGGCCCEE
T ss_pred             HCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             01236566545445672687337233899999999999999998587536960


