BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (522 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 1066 0.0 UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 771 0.0 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 607 e-172 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 563 e-159 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 515 e-144 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 510 e-143 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 496 e-139 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 402 e-110 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 384 e-105 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 382 e-104 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 381 e-104 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 380 e-104 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 372 e-101 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 362 1e-98 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 359 2e-97 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 349 2e-94 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 338 2e-91 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 325 3e-87 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 325 4e-87 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 322 2e-86 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 313 1e-83 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 311 3e-83 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 307 6e-82 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 305 2e-81 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 295 4e-78 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 292 2e-77 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 292 2e-77 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 291 4e-77 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 286 2e-75 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 283 1e-74 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 280 8e-74 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 278 4e-73 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 276 1e-72 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 275 4e-72 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 275 4e-72 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 274 7e-72 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 273 9e-72 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 272 3e-71 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 270 8e-71 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 268 5e-70 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 264 5e-69 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 262 2e-68 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 262 3e-68 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 261 3e-68 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 257 7e-67 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 253 1e-65 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 253 1e-65 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 250 1e-64 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 248 3e-64 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 248 4e-64 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 248 4e-64 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 246 1e-63 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 246 2e-63 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 245 3e-63 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 242 2e-62 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 242 3e-62 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 241 5e-62 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 241 5e-62 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 241 6e-62 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 240 8e-62 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 239 2e-61 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 238 4e-61 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 237 9e-61 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 236 2e-60 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 235 3e-60 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 234 7e-60 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 233 1e-59 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 230 1e-58 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 218 4e-55 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 218 6e-55 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 217 7e-55 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 213 2e-53 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 206 1e-51 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 204 5e-51 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 202 2e-50 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 199 2e-49 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 196 1e-48 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 194 1e-47 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 193 2e-47 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 192 3e-47 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 191 8e-47 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 190 1e-46 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 190 1e-46 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 184 7e-45 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 183 1e-44 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 180 1e-43 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 178 5e-43 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 177 7e-43 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 177 7e-43 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 177 9e-43 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 176 2e-42 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 165 3e-39 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 165 4e-39 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 163 2e-38 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 162 4e-38 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 157 1e-36 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 156 2e-36 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 152 4e-35 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 150 1e-34 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 147 7e-34 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 144 9e-33 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 143 1e-32 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 143 2e-32 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 135 3e-30 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 134 6e-30 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 134 7e-30 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 134 8e-30 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 130 2e-28 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 128 4e-28 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 125 4e-27 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 118 5e-25 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 117 1e-24 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 116 2e-24 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 112 3e-23 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 111 6e-23 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 108 6e-22 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 94 2e-17 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 91 8e-17 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 91 9e-17 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 80 1e-13 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 76 3e-12 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 74 1e-11 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 68 8e-10 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 65 7e-09 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 65 9e-09 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 64 1e-08 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 58 8e-07 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 55 5e-06 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 55 5e-06 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 54 2e-05 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 53 2e-05 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 51 8e-05 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 48 0.001 UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 46 0.004 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 42 0.061 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/511 (70%), Positives = 430/511 (84%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +V+LSRLQFA+TA+YHFLFVPLTLGM FLLAIME+VYV++GKQ+YKDM KFWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV TG+TMEFQFGTNW+YYSHYVGDIFGAPLAIEGL AFFLESTF+G+FFFGWDRL Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K+QH+ VTWLVALGSNLSALWILVANGWMQ+P+ ++FNFETMRME+V F L+LNPVAQV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHTVASGYVTGA+F+L IS++Y+LK RD FA+RSFAIA++FGMA++LSVIVLGDESG Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 YE+G+VQK KLAAIEAEWET PAPA+FTL G P++EE+ FA++IP+ LGIIATRS+D Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 VIG+K+L+ HE RIRNGM Y LLE+LR+G+ FN +K DLGYGLLLK+YTP Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 NV DA+E QI+QA KD+IP VA ++++FR MV GF +L + +FW+ R K WL Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 L+ ALY +PLPWIA + GWFVAE+GRQPW IG VLPT ++ SSL+ GDL S++ + Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 TL LV E++LM +FARLGPSSL TGRYHFEQ Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHTGRYHFEQ 515 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust. Identities = 301/506 (59%), Positives = 384/506 (75%), Gaps = 2/506 (0%) Query: 1 MLD--IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL 58 M+D +VELSRLQFA+TAMYHF+F PLT+G++FLL IME+VYV++GKQI++ MT FWG L Sbjct: 16 MIDSTVVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVL 75 Query: 59 FGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW 118 FGINFA+GV TG+ MEF+FG NWSYYSHYVGDIFGAPLAIEGLMAFFLE+TF+GLFF GW Sbjct: 76 FGINFAMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGW 135 Query: 119 DRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNP 178 +RL KVQH+ TWLVALGSN SALWIL+ANGWMQNP + FN +TMRME+V F ++ NP Sbjct: 136 NRLSKVQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNP 195 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 VAQ KFVHTV++GYV GA+F++ ISA+Y+L+G+ A+RSFA+AA+FG+ + LSV+VLG Sbjct: 196 VAQAKFVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLG 255 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 DESGY + QK KLAAIEA WET+ APA FT FGIP+Q N +AI+IPY +G+IATR Sbjct: 256 DESGYAASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATR 315 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 S+D P+ G+ EL+ + E RIR G AY L+++R+ D R F++ +DLG+GLLLK Sbjct: 316 SLDEPIPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLK 375 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 RY ++ +AT QI QA D++PRV PL++ FRIM A G L+A A++FW ++ E Sbjct: 376 RYRDDIGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQE 435 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 K+W L AL+ +PLPWIA+E GWFVAEYGRQPWA+ VLPT A S L +++ ++V Sbjct: 436 KRWFLSLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGF 495 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSL 504 LYT LV + L K GP L Sbjct: 496 TALYTTLLVIAIKLSLKTINKGPEVL 521 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust. Identities = 267/418 (63%), Positives = 343/418 (82%) Query: 98 IEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS 157 IEGLMAFFLESTFVGLFFFGW+RL K +H+ T+ VA GSN SALWILVANGWMQNPIAS Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 DFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAK 217 +FNFETMRME+ SFSELVLNPV Q KF+H YV GA+F+LGIS++Y+LKGRD FAK Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQ 277 RSF++ ASFG+ A++SV+++GDESGYE+G Q TKLAA+E E+ETQPAPAA+ F IP+ Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 EEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTD 337 E N+F+I IPYA GIIATRS+D + GLK++ V +E+R+R GM AY LLE+LRSG+ Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 QAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG 397 +A ++ F +++KDLG+GLLLK+YTPNV DATE QIQ+A ++IP V P ++AFR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 FLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 FL+L +I +F +R ++ ++LLR L+G+PLPWIA+E+GWF+AEYGRQPWAI E+L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 P V+NS+LT GDL F++ L+CGLYTLFLV E++LMFK+ RLGPS+LKTGRY+FEQS+ Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQST 418 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 244/511 (47%), Positives = 354/511 (69%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V LSR QFALTA++HFLFVPLTLG+ ++L IM +VYV +G IYKDMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG+T+EF+FG NW+Y+S +G F LA+EG+ AF LE+T GLFFF W+++G Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+L+ALG++LS + IL AN WMQ P A+ FN++ M +E+ S L LN +AQ+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H G++TG++F++G+SA+Y+L GRD FAKRSFA+ FG+ L+V GD++G Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ + K+AAIEA+W+TQ PA+++L P Q+E+ N F I IPYAL +IAT S+ Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 V G ELM +++RI NGM AY + ++ R +N K DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 V ++T A+I+ AT+D+IP +A +++FR M L+L ++ F+ RN + + + Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 LR ALY IPLP++A E GW +AE GRQPW++ E+LPT ++ S+++ ++ S++ Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 + V ELFLMFK+AR GPSSL+TGRY+FE+ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLETGRYYFER 516 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust. Identities = 260/506 (51%), Positives = 345/506 (68%), Gaps = 8/506 (1%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V+LSR QFALTA+YHF+FVPLTLG+ F+LA METVYV++G+QIYKDM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATG+TMEF+FGTNWS YSH+ GD+FG PLAIEGLMAFF+ESTFVGL FFGWDRL Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+LVALGSNLSALWIL+AN M P + F+ ETMRM+ SF LV NP AQ Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHT +GYV+ AMF++GISA+Y+L+G+ FA RSF +AA FG+ + ++VI LGD G Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEMGDVQKTKLAAIEAEWETQPAP-AAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q TK+AAIE W T P + L +PD ++ N F + +P L + T + D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 P+ G+ EL RIR+G++A S L + +D A F ++D+GYGLL R+ Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSD-ADLTLFTQHEQDMGYGLLAARHA 365 Query: 362 PN--VADATEAQIQQATKDSIPRVAP----LYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 PN V + E QI K + P + P +++FR MV A+ A+S + ++ R Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 + K LL+ ++ IPLP +A E GW AE GRQPW + LPT ++ SS ++FS+ Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 VLICGLYTLFLVAELFLMFKFARLGP 501 + LY++F+ AEL+LMFKFARLGP Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGP 511 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/576 (45%), Positives = 361/576 (62%), Gaps = 63/576 (10%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V+L+RLQF LTA +HFLFVPLTLG+ ++L ME +Y+ +GK++YKDM KFWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 LG+ TGLTMEF+FGTNWSYYS VGDIFG PLAIEGL AF LESTF GLFFFGWD+L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 QH+ T+ +A+GS+ SAL ILVANG+MQ+P+ S+F TMRME VS +L LN AQ F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H + +GY T A+F++GISA+Y+++GRD AFAKRS AI FG+ + I+ GD +G + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 VQ K+AAIEAEW+T APAAF +P Q+E+ N F + IP LG+IAT S DT + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 IGLKELM---------------------------VQHEER----------------IRNG 321 G+K ++ V E+ I+ G Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIKEG 375 Query: 322 MKAYSLLEQLR----SGSTDQAVRDQFN--SMKKDLGYG-LLLKRYTPNVADATEAQIQQ 374 AY+ L + R SG T + +N + +K +G+G +L++ A A I + Sbjct: 376 GLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATIAK 435 Query: 375 ATKDS----------IPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK---KW 421 A D +P VA ++++FRIMV GF + +I + + RN + ++ Sbjct: 436 AANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFSRF 495 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 +LR ++ IPLP+IA AGW+V E+GRQPW + + LPT++++S+LTA D+ SM + + Sbjct: 496 ILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFFLI 555 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 T +FLMFK+ARLGPSSL TG+Y+FEQ+ + Sbjct: 556 DTALFAVMVFLMFKYARLGPSSLGTGKYYFEQNKKS 591 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/523 (41%), Positives = 315/523 (60%), Gaps = 40/523 (7%) Query: 1 MLDI----VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWG 56 +LD+ ++ SR QFALTA+YH+LFVPLTLG+A ++ I+ET Y + KQ +K+ + FW Sbjct: 28 LLDVSAATIDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQ 87 Query: 57 KLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFF 116 KLFGINFA+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+EG++AFF+ESTFV + FF Sbjct: 88 KLFGINFAMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFF 147 Query: 117 GWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL 176 GW ++ H+ TWL LG+ +SA WILVAN WMQ P+ FN +TMR EM SF ++ L Sbjct: 148 GWKKVSAGFHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVAL 207 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 +P A KF HTV S ++ GA+F++G+S+WY+LKGR+ A +S I G+ A L + Sbjct: 208 SPFAVDKFFHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAAL 267 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP--DQEEETN----KFAIQIPY 290 GD S Y++ VQ KLAA+EA + + + G+P Q + N + I +P Sbjct: 268 TGDNSAYQVAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPK 327 Query: 291 ALGIIATRSVDTPVIGLKELM---VQHE--------ERIRNGMKAYSLLEQLRSGSTDQA 339 AL ++AT D V G+ L+ V+ + E+++ G A + L+Q R+G D+A Sbjct: 328 ALSVLATHDFDGYVPGINNLIDGYVKEDGTKEPSVAEKMQRGRMAITALQQYRAGKKDEA 387 Query: 340 VRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFL 399 R K GYG + ++ +P + +++FR+MV G L Sbjct: 388 TRKTLTDNIKYFGYGYV-----------------KSADQIVPNIPLNFWSFRVMVGLGIL 430 Query: 400 LLAIIALSFWSVIRNRIGEK--KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 + +S R I EK +WL +A+ +PL ++A EAGW VAE GRQPW I ++L Sbjct: 431 FILFFLISGHVSWRKDISEKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDML 490 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLG 500 PT VA S L AG ++ + L L+T L E+ ++FK + G Sbjct: 491 PTWVAVSDLNAGSVMITFFLFLALFTTMLAVEINILFKQIKKG 533 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/509 (43%), Positives = 308/509 (60%), Gaps = 21/509 (4%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+A ++ +MET YV +GK+ +K+ KFW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL LG+ +SA WILVAN WMQ P+ FN ET+R EMV F+ + L+P+A Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV S ++ GA+F++GIS WY+L+ R FA S +AA+ G+ A L GD SG Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ VQ K+AA E + FT+ G ++IP L I+AT +D Sbjct: 248 VQVAKVQPMKMAAAEGLHDGGNG-VPFTIAG-----------DLKIPKMLSILATHDIDG 295 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK---DLGYGLLLKR 359 V G+ L+ + ++ +G A S E+++ G A D F K + K Sbjct: 296 YVPGINNLL-EGGYQMPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG--FLLLAIIALSFWSVIRNRIG 417 NV I+ +P V +++FRIMV G F+L II L + ++ Sbjct: 355 LDENVKYFGYGYIKDPAH-LVPNVGLTFWSFRIMVGLGGYFILFFIIVLIV--SKKEKLA 411 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 + +WL R AL+ IPL +I +AGW VAE GRQPWAI ++LP A S L G + + + Sbjct: 412 DMRWLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFI 471 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKT 506 L+T+ L AE+ +M K + GP +K Sbjct: 472 FLLLFTVLLFAEIGIMLKAIKKGPEGIKN 500 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 206/528 (39%), Positives = 318/528 (60%), Gaps = 33/528 (6%) Query: 1 MLD--IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL 58 M+D ++E +R QFA+TA++HF FVP TLGM+F++A ET+YV +GK +K++T+FW + Sbjct: 1 MVDYSMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLI 60 Query: 59 FGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW 118 FGINFA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+EG++AFFLE+TF + FFGW Sbjct: 61 FGINFAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGW 120 Query: 119 DRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS--DFNFETMRMEMVSFSELVL 176 R+ K H+ +WL+A+GSNLSALWIL+ANG+MQ+P + +N + R+EM F ++ Sbjct: 121 KRVSKGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMIT 180 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 PVAQVKF+H V+S Y A+F+LGIS+ Y+L+G+ FAK+S +AA+FG+ A + V Sbjct: 181 QPVAQVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAV 240 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP--------DQEEETNKFAIQI 288 +GDE YE+ + Q TK+AA E + A GIP + +E F I++ Sbjct: 241 IGDEHAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIEL 299 Query: 289 PYALGIIATRSVDTPVIGLKELMVQHE-------ERIR-NGMKAYSLLEQLRSGSTD--- 337 P L ++ R ++ V GLK+L+ +E E++ G KA L+ + + Sbjct: 300 PGMLSLLGKRDINAFVPGLKDLVNGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANGDK 359 Query: 338 ---QAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV 394 +A + +F + D+ G+ + R AD P VAP++++F IMV Sbjct: 360 AGMEAAKAEFYKVVADVN-GVKVTR-----ADLMGYGYLTDPTKLYPPVAPVFYSFHIMV 413 Query: 395 ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 A GF + + L++ S+++ + + A+ +PLPWI GW AE GRQPW + Sbjct: 414 ALGFWFILLFLLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVF 473 Query: 455 EVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 VLPT+ + + + ++ + L + + +AEL ++F + GP Sbjct: 474 GVLPTSESVTPIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPK 521 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/515 (42%), Positives = 303/515 (58%), Gaps = 34/515 (6%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V+ SR QFALTA+YH+LFVPLTLG+A ++ IMET Y + K+ ++ +FW +LFGINFA Sbjct: 13 VDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINFA 72 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+ESTFV + FFGW ++ Sbjct: 73 MGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSAG 132 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H+ TWL LG+ LSA WILVAN WMQ PI FN ETMR EM SF ++ L+P A KF Sbjct: 133 FHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDKF 192 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 HTV S +V GA F +G+S WY+L+ R AK+S I + G+ A L G ES Y Sbjct: 193 THTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAYM 252 Query: 245 MGDVQKTKLAAIEAEWE-----TQPAPAAFTLFGIPDQEEETN-KFAIQIPYALGIIATR 298 + Q KLAA+EA +E + A F PD E+ + +P L I+AT+ Sbjct: 253 VAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILATK 312 Query: 299 SVDTPVIGLKELMVQH-----------EERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 S V G+++++ + +E+ G KA L+ R+G ++ + Sbjct: 313 STTGYVPGVRDIIKGYTKADGTKEPSLKEKQERGKKAIQALKDYRAGKDKESNEKILDHD 372 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 K GYG + DA + +P + ++AFRIMV G L + + A+ Sbjct: 373 MKYFGYGY--------IKDANQL---------VPFIPINFWAFRIMVGLGGLFILVFAVM 415 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 + + + I +WL + IPL +IA E+GW VAE+GRQPW I ++LPT A S L+ Sbjct: 416 LFLLYKKDITRPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDLS 475 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 +G + F+ L L+T L AE+ +M K + GP+ Sbjct: 476 SGGIAFTFFLFLVLFTAMLTAEVSIMCKQIKKGPA 510 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/533 (41%), Positives = 310/533 (58%), Gaps = 57/533 (10%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+ + AIMET+Y +G + +K +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGWD++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL +G+ LSALWIL+AN WMQ P+ FN +T+R EM F + L+PVA Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV SG++ GA+F+LGIS WY+LK R+ FA S ++A FG+ A + +I GD S Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEMGDVQKTKLAAIEAEWE------------TQPAPAAFTLFGIPDQEEETNKFAIQIPY 290 Y++ Q KLAA+E +E PA ++ + F I+ P Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNGVGLVGIGILNPAKTSYL------DNQNAFIFDIKFPK 301 Query: 291 ALGIIATRSVDTPVIGLKELM------------VQHEERIRNGMKAYSLLEQLRSGSTDQ 338 L +A R ++ V G+ L+ + +E+I G A L R D+ Sbjct: 302 LLSFLAERDINAYVPGIVNLIEGGYTTNKGTVALSAKEKIEKGKAAIKALADYRKAVKDK 361 Query: 339 --AVRDQFNSMKKD----LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI 392 A Q+ ++ GYG + D E IP V +++FR+ Sbjct: 362 DTAAAGQYRVTLEENFPYFGYGY--------IKDPAEL---------IPHVGLTFYSFRV 404 Query: 393 MV--ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP 450 MV C F+LL II L W + +I +WL L+ IPL +IA +AGW VAE GRQP Sbjct: 405 MVILGCFFILLFIITL-IWDK-KGKIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQP 462 Query: 451 WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 WAI ++LPT+ + S L + + L L+T+ L+AE+ +M K + GP + Sbjct: 463 WAIQDILPTSASISKLNPSSVQTTFYLFLILFTILLIAEIGIMVKAIKKGPEA 515 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/508 (38%), Positives = 296/508 (58%), Gaps = 16/508 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR QF +TA YHFLFVPLTLG+A ++AI++T+Y+ + + Y ++ F KLF I Sbjct: 1 MDLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATGLTMEF+FGTNW YS VGDIFGAPLAIEGLMAFFLESTF+GLF FG DR+ Sbjct: 61 NFAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF--NFETMRMEMVSFSELVLNPV 179 V H W+VALGS LSALWIL+AN WMQ P + ++ + +F E LN Sbjct: 121 SDVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++F+H V +GY+ G F++G+ A+Y+LKG+ AK A F + I+ GD Sbjct: 181 SIIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 GY++ + Q K+A +E +WET+ A+ L G+ DQE++ + ++IPY L I++ Sbjct: 241 IHGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHD 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQ-LRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 + G+K+L+ +++++ + +LEQ L+ A +++ +K DL Sbjct: 300 PNAEFKGIKDLVKEYQQKAQEASARIPVLEQKLKELEATNASQEEIQKVKDDLAMA---- 355 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 ++A+ T + +P VA ++ F +MV GF ++ + + + Sbjct: 356 --------KSQAKAYNITFNDLPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 K L L IPLP+IA GW AE GRQPW + VL T S +++FS++ Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKT 506 +YTL + + M K + GP + K+ Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKS 495 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 362 bits (930), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 204/526 (38%), Positives = 301/526 (57%), Gaps = 31/526 (5%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 +V SR QFALTAMYH+LFVPLTLG+ ++AI+ET+Y +GK +K +FW KLFGINF Sbjct: 8 LVSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINF 67 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ K Sbjct: 68 AIGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSK 127 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL +G++LSA+WIL+AN WMQ P+ FN +TMR EM F LV + A K Sbjct: 128 GFHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINK 187 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFA--FAKRSFAIAASFGMAAVLSVIVLGDES 241 F HT++S + G++F LG+ Y+L+ D FA ++ I A FG+AA L GD S Sbjct: 188 FWHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTS 247 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPA----------AFTLFGI-------PDQEEETNKF 284 Y + Q KLAA+E +++ +LFGI P ++E F Sbjct: 248 AYNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLF 307 Query: 285 AIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGS------TDQ 338 + +P L ++ TR+ V G+ ++ + +G A + ++ G D Sbjct: 308 NVSVPRVLSVLGTRNPSGYVPGINNILEGGYVK-ADGTTAIPVDSMMQRGRRAIMALNDY 366 Query: 339 AVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGF 398 + Q M+ L + ++ P Q D +P + Y++FRIMV G Sbjct: 367 SKAKQAGDMEAALQHKSVIDENFPYFG----YSYIQHKNDIVPPIGLTYYSFRIMVGLGM 422 Query: 399 LLLAIIALSF-WSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 L + + +++ S + + +W A+ +PL W+A ++GW VAE GRQPW I ++L Sbjct: 423 LFILLFLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPWTIQDLL 482 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 P A S L AG +I + + L++ LVAEL +M K + GP + Sbjct: 483 PVQAAVSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPET 528 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 190/496 (38%), Positives = 284/496 (57%), Gaps = 22/496 (4%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++LSR QFA TA+ HF+FVPLTLG++ +AI++T+ + Y + F KLF + Sbjct: 1 MDLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA GVATGLTMEF+FGTNW YS +VGDIFGAPLAIEGLMAFFLESTF+G+F FG DR+ Sbjct: 61 NFAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF--NFETMRMEMVSFSELVLNPV 179 H W+VALGSNLSALWIL+AN WMQ P + +R E+ +F E V+N Sbjct: 121 SDGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKIVQTPQGIRAELTNFWEAVINHT 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 ++ +HTV +G +T F++G+ A+++L+ ++ AK +A F + +S I++GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 +G+ + + Q KLA +E +W T+ PA+ +FG DQ + IQIP L ++ + Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTE-QPASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 D V G+ +L+ ++++ +N LE + + + A++D+ Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDKI--------------- 344 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 VAD A+ + +P + ++ F IMV GF + + + + Sbjct: 345 ----VADKAYAKAYNISLKDLPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 K L+ LY IPLP+IA E GW AE GRQPW + VL TA A S + +++FS++ Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLVAELFLMFK 495 +Y L + M K Sbjct: 461 TIYILLFYVYVTTMIK 476 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 202/511 (39%), Positives = 290/511 (56%), Gaps = 76/511 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA+T M+HF+FVPLTLG++ ++A MET Y ++G + + MT+FWGKLF I Sbjct: 1 MDTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+TMEFQFG NW+ YS YVGDIFGAPLAIE +AFFLES F+GL+ FGWD++ Sbjct: 61 NFALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLVA+ +NLS L IL+AN WMQNP+ + R EM F ++ NP Sbjct: 121 SQKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +KF H + + Y A F++GISAW++L+ + F KRSF AA FG+A L ++GD S Sbjct: 179 IKFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLS 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 E+ VQ K AA+E+ WET+ A L +PD++ E Sbjct: 239 SVEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPDEKNE--------------------- 276 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 RN ++A+S+ + + A RD Sbjct: 277 -----------------RNSLEAFSIPNMI----SLLAFRD------------------- 296 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG--FLLLAIIA--LSFWSVIRNRIG 417 A+A ++ ++ P V P++ +FR+MV G F+L ++IA +SF + Sbjct: 297 ---ANAEVTGLKSFPRELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISF----KGHPE 349 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMV 476 + L ++ +PLP+IA + GW VAE GRQPW + VL TA A ++S++A + S+ Sbjct: 350 RHRLFLTLLVFSLPLPYIANQLGWLVAEMGRQPWIVYGVLKTADAVSTSVSATQVAISLA 409 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 LY V +++L+ K+AR GP S +G Sbjct: 410 GFTLLYGGLGVIDIYLLAKYARKGPDSDGSG 440 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 199/501 (39%), Positives = 278/501 (55%), Gaps = 62/501 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R QF +T++YHFLFVPLTLG++ L+AIMET+YV +G + YK+M +FWG+LF I Sbjct: 1 MDALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EF FG NWS YS +VGDIFGAPLA+E L AFFLESTF+GL+ FGW++L Sbjct: 61 NFAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLVA SNLSA WILVAN +MQ P+ F R EM F L+ NP Sbjct: 121 SPALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F HTV +G+VT A F++GISA+++L+ +RSF +A G+ L V +G Sbjct: 179 YQFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWET-QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + Q K+AA EA W++ PAP A L + DQE + N I+IP +A S Sbjct: 239 GQHLVATQPMKMAAAEALWDSADPAPLA--LVALVDQENQQNNLEIKIPALTSFLAYNSF 296 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 V GLKEL E+ G Y Sbjct: 297 RGEVKGLKELQAAAAEQYGPG-------------------------------------NY 319 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 P V AP++++FR+M+A G L+ + S + + + + Sbjct: 320 IPPV-------------------APVFWSFRLMIAAGLWLILLSLYSLYLWRKGLLESRP 360 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSMVLIC 479 +L+A L+ IP+P++A AGWFVAE GR PW + G A + ++A ++ ++V Sbjct: 361 LVLKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTTLVAFT 420 Query: 480 GLYTLFLVAELFLMFKFARLG 500 LY L V +++L+ K+AR G Sbjct: 421 LLYGLLAVVDVYLLAKYARQG 441 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 196/508 (38%), Positives = 280/508 (55%), Gaps = 69/508 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M + V+L+RLQFALT++YH+LFVP TLGM +A +E YV +GK++YK M KFWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+E LMAFFLESTF+G++ FGWDR Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 L K H V VALG+NLSA WILVAN +MQ+P+ F R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H V +G +T + I+ ISAW++L+ F +RS A +GM L LG Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRS----AKWGMVIALVFGTLGAL 234 Query: 241 SGYEMGD----VQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 +G+ G VQ K+AA+EA WETQ PA F+L D + + N A++IP L + Sbjct: 235 AGHHQGQYITKVQPMKMAAMEALWETQD-PAPFSLVANIDTKAQKNTGALEIPGGLSFLT 293 Query: 297 TRSVDT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 S + V G+K+L + E + G Sbjct: 294 QNSFTSGKVEGIKDLQAKSEAQYGPG---------------------------------- 319 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 Y P+ V +++ FR+MVA G L+L + + +++ Sbjct: 320 ---NYIPD-------------------VPAIFWTFRVMVAAGSLMLLVAFVGLILNAKDK 357 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFS 474 + E + L+ + +PLP+IA GWFVAE GRQPW + G L A+ S+TA +++ + Sbjct: 358 LVENRTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTT 417 Query: 475 MVLICGLYTLFLVAELFLMFKFARLGPS 502 ++ +Y + +A ++L + + GP Sbjct: 418 IIGFTLVYIVAAIAAIYLAVEHIKKGPD 445 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 200/505 (39%), Positives = 278/505 (55%), Gaps = 47/505 (9%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQ----IYKDMTKFWGK 57 +D V L+R+QFALTAMYHFLFVP+TLG++ LLAI+ T + +Y+ + +F+ Sbjct: 1 MDAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INFA GV G+ +EF+FGTNWS YS VGDIFGAPLAIE + AFFLES F+G+ FG Sbjct: 61 LFAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 DR+ + TW+VA+G+NLSALWILVAN W Q P F E + + SF + V+N Sbjct: 121 RDRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTP--KGFYLEGGKAYLASFFDAVVN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 +FVH +G +TGA+F+ GISA+Y+LK + AK SF IA + GM A L I+ Sbjct: 179 YSTPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIA 238 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD GY++ Q KLA +E +WET+ + G I+IP L I+A Sbjct: 239 GDLHGYQVARTQPLKLAMMEDKWETESGAGLEIVPG------------IEIPKLLSILAY 286 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+K+L VQ ++I G ++ D+ + D Sbjct: 287 HDPDAKVYGIKDL-VQTFQKIAKG---------------EEVGEDELPELWLD------- 323 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 P Q T++ IP +++ R MV GF I +L F +++ I Sbjct: 324 ----PR--QFAGRQSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIE 377 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +++WLL+ Y IPLP +A GW VAE GRQPW + +L T A S L AG ++ S++L Sbjct: 378 QRRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIIL 437 Query: 478 ICGLYTLFLVAELFLMFKFARLGPS 502 +Y + + L LM + GP Sbjct: 438 FSSIYFIVFLIFLGLMVQKVIKGPK 462 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 187/505 (37%), Positives = 269/505 (53%), Gaps = 66/505 (13%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R+QFA T ++HFLFVP+++G+ F++A+MET+Y++ ++Y M KFWG LF INFA+G Sbjct: 6 LARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLINFAVG 65 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V TG+ EFQFG NWS YS +VGD+FGAPLAIE L+AFF+ES F+GL+ FGWDRL K H Sbjct: 66 VVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRLPKKIH 125 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 WLV+ G+ +S+ WIL AN +MQ P+ F + R EM F L+ NP V+F H Sbjct: 126 ALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLWVEFPH 183 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 + TGA FI G+SA+ +LK ++ F K+SF +A G+ A L V + G + Sbjct: 184 VIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLM 243 Query: 247 DVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIG 306 + Q K+AA E WE PAA+T F D + E + I++PYAL +A + V G Sbjct: 244 ESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGSVKG 303 Query: 307 LKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVAD 366 +K L ++E+ G Y P V Sbjct: 304 MKTLQAEYEKIYGKG-------------------------------------DYIPPVKT 326 Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAA 426 +++FRIMV G +++ W R ++ KW LR Sbjct: 327 T-------------------FWSFRIMVGAGVVMILAALGGLWLNRRKKLENSKWYLRIM 367 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICGLYTLF 485 + I P++A AGW + E GRQPW + ++ TA + S ++TAG L+FS I ++ Sbjct: 368 IALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFS---IIAFGVMY 424 Query: 486 LVAELFLMFKFARLGPSSLKTGRYH 510 ++ L+F F R +K G H Sbjct: 425 MILGALLVFLFIR----EIKKGAEH 445 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 185/508 (36%), Positives = 279/508 (54%), Gaps = 69/508 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V LSR+QFA+TA +HF+F PLT+G+A+L+ +M+T Y+ +G+++Y+ M++FW K+F I Sbjct: 1 MDVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA E + AFFLES F+G+ +G DR+ Sbjct: 61 SFVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K + + +VA+GS LSALWI++AN W Q P + ++ R E++ F +LN Sbjct: 121 SKKVYWFSSLMVAVGSTLSALWIIIANSWQQTP--AGYHIVNGRAELIDFKAALLNASTV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +++HTV +TGA F++ ISAWY+L+ R+ AFAK+S A + A L+ I +G Sbjct: 179 PRYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMH 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAAIE +ET+ A+ LFGIPD++ F + IP Sbjct: 239 AVQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIP------------ 285 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 KA SLL +G D V+ LK + Sbjct: 286 ---------------------KALSLLA---TGDPDGEVQG--------------LKAFP 307 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 ++ P V + F +MVA G L + W + + + + + Sbjct: 308 ---------------EEERPPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRL 352 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICG 480 L+ AL+ +PLP+IA E GW AE GRQPW + ++L T S ++ A ++ S++L Sbjct: 353 FLKLALWSVPLPFIANEVGWIAAEVGRQPWIVYKLLRTVDGISYTVPAWQILASIILFVL 412 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGR 508 +Y+L V +L+ K GP + T Sbjct: 413 IYSLLFVVWFYLLRKKLAAGPEAFATAN 440 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 151/263 (57%), Positives = 190/263 (72%), Gaps = 2/263 (0%) Query: 252 KLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELM 311 KLAAIE+EWETQPAPA+FTL GIP+Q+EE +AI+IPYALG+IATRS+D PVIGL+EL Sbjct: 2 KLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLRELA 61 Query: 312 VQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQ 371 EE I++GM AY L++++ G T +A R F+ K+ LGYGL+LK++TPNV DAT Q Sbjct: 62 KLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPEQ 121 Query: 372 IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI--GEKKWLLRAALYG 429 I+ A K +IP VAP++F+FRIMVA GFL +A +FW R + ++W LR A++ Sbjct: 122 IKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVWA 181 Query: 430 IPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAE 489 IPLPWIA+E GW VAE GRQPW I VLPT ++ SSL DL S+ YT V E Sbjct: 182 IPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVIE 241 Query: 490 LFLMFKFARLGPSSLKTGRYHFE 512 + LMFK+ARLGPSSL TGRYH E Sbjct: 242 IKLMFKYARLGPSSLHTGRYHHE 264 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 307 bits (787), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 187/503 (37%), Positives = 272/503 (54%), Gaps = 62/503 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMET-VYVLSGK-QIYKDMTKFWGKLF 59 +D+VELSR QFA T+++HF FV LT+G+AFL+A+MET +V S + ++Y MT F+G LF Sbjct: 1 MDVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLF 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 INFA+GV TG+ EFQFG NWS YS++VG+IFG PLA+E LMAFFLESTF+GL++FG D Sbjct: 61 LINFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKD 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 RL + WLVA+G+ +SA WI++AN WM +P+ + + + F +V N Sbjct: 121 RLKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVG--YEVVDGQARLTDFGAVVFNYK 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 A + F H S +V F+LGISA+++L+ +D RS I F + +V G Sbjct: 179 AWLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGH 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q K AA+EA+WET +PA ++L + DQE N +++IPY I+A S Sbjct: 239 TEAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 ++ G+ +L Q++E G Sbjct: 299 LEGRYEGINQLEEQYDEAYGEG-------------------------------------D 321 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLL--AIIALSFWSVIRNRIG 417 Y P V A +Y++FRIMVA G LLL A + L W R + Sbjct: 322 YVPPV-------------------AWVYWSFRIMVAIGSLLLATAFLGLFLWWRRRQGLD 362 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +W LRA + IPLPWIA GW V E GRQP+ + +L S+ + G+++ +V Sbjct: 363 GTRWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVG 422 Query: 478 ICGLYTLFLVAELFLMFKFARLG 500 + +Y + +++L+ AR G Sbjct: 423 LWVVYLALIGLDVYLLTVTARAG 445 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 182/507 (35%), Positives = 272/507 (53%), Gaps = 66/507 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + ++R QF +T +YHFLFVP+T+GMAF +AI ET +V + K +Y TKFWGK+F I Sbjct: 1 MDPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLV++G+ LSA +I+ AN +MQ+P+ N + R EM ++ P+ Sbjct: 121 SPRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNM 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVL----SVIVL 237 + H +A ++GA GI++++++K RD F A FG+ +L +VIV Sbjct: 181 WAYSHVIAGAILSGAAMFAGIASYFLMKKRDV----EVFRPAVRFGLVGMLIGSLAVIVT 236 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD M DVQ K+AA EA W+T A+F+LF I + + F+I++P L +AT Sbjct: 237 GDLLAKVMTDVQPMKMAAAEALWDTTEG-ASFSLFTIGTLDGSSEVFSIRVPGVLSFMAT 295 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 S V G+ ++ Q E Sbjct: 296 ESFSGTVEGINDVQAQFE------------------------------------------ 313 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++Y P D P + Y+ FRIM+ GF++L + + W + R+ Sbjct: 314 EQYGPG--------------DYRPIIPVAYWMFRIMMGAGFVMLLVSIVGLWLTRKGRLP 359 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWA-IGEVLPTAVANSSLTAGDLIFSMV 476 E K + R A++ I P + AGW E GRQPW +G + S++ G ++ S++ Sbjct: 360 ESKTVWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLI 419 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSS 503 + LY + V E+ L+ K+ ++GP S Sbjct: 420 IFTLLYGILAVVEVGLVVKYVKIGPPS 446 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 164/474 (34%), Positives = 259/474 (54%), Gaps = 9/474 (1%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL-FGIN 62 + + +RL+FAL+ M H +FVPL +G+ + AI ET+YV YK +F GKL I Sbjct: 6 LTDSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIV 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM---AFFLESTFVGLFFFGWD 119 F L + LT +W ++ +F + + G + L T V LF+ GW Sbjct: 66 FVLIITGILTPPMP--EDWQQLDIFINSVFSEYVGLLGTIVSTGMMLWLTAVSLFYVGWR 123 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS-DFNFETMRMEMVSFSELVLNP 178 L H+ +TWL+ + L ++V NGWM +P ++ F+ TM + S E+V P Sbjct: 124 YLPAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIVSTP 183 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 +A +F H ++ G + ++ +S +Y+ K R AFA+ I AS G+ L I G Sbjct: 184 MASTRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAIFSG 243 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D G ++ Q KLA +EA W+TQ A LF +PDQ+ E N+F ++IP LG + + Sbjct: 244 DIHGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWMLSG 303 Query: 299 SVDT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + DT PV G+K+L ++ +RIRNG+ A+ + S S QA R+ + ++DLGY L+ Sbjct: 304 TDDTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYAELV 363 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++Y P++ + TE QI+ A D++ V L+F+FR+MV G +L + + + I+ R+ Sbjct: 364 RKYNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKGRVN 423 Query: 418 E-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGD 470 LL+ + Y +P+P+IA +GW ++EYGRQPW I V+PT S G Sbjct: 424 SVSTRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQ 477 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 183/504 (36%), Positives = 272/504 (53%), Gaps = 52/504 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +DI++++R QF +T +YHFLFVPLT+G+ L+A+MET ++ + + + + KF+GKL I Sbjct: 1 MDILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLV LG+ SA +IL AN WMQ+P+ ++N +T R E+ F ++ N V Sbjct: 121 PRKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG---RDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + F H + + Y+T A FILGISAW RD + + + A + A L V V G Sbjct: 181 ITFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQP-APAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 D G M DVQ K+AA EA ++T A F++F I + ++ K+++ +P L +A Sbjct: 241 DIQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAE 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+ +L +++E + +D G Sbjct: 301 GDTDATVEGIDDLRAEYQE-----------------------------TYGQDPGAAY-- 329 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Y+P D P + Y++FR+M+ G L+ A AL W + R Sbjct: 330 --YSPG--------------DYTPYIPVTYWSFRLMIGLGALMAAGAALVLWLTRKGRAP 373 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMV 476 +W L L +A GW E GRQPWA+ ++ TA S ++ + S+V Sbjct: 374 TARWFAPMVLSLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 LICGLYTLFLVAELFLMFKFARLG 500 ++ LY + V E+ L+ K+ R G Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKG 457 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 203/328 (61%), Gaps = 1/328 (0%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD++ LSRLQF TA+ H++F+PLT+G+A +A ME Y + +Y M +FW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA EG+ AFFLESTF+GL FG D+ Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + + +VA+G++LS WI+ AN W Q P N E R EMVSF+E++ NP Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 V+++H + ++T AMFI+ ISA++++K ++ AKRS + G+ + G Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 +G+ Q KLAA EA WET+ A A LF IPD E E N+F I IP L + V Sbjct: 241 HAQLVGETQPEKLAAYEAHWETE-ANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDV 299 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLL 328 + V GLKE + + A+ ++ Sbjct: 300 NAEVTGLKEFAAEDRPPVLGNFIAFRVM 327 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 3/176 (1%) Query: 339 AVRDQFNSMKK-DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG 397 A+ D N + ++G +L T + +A +++ + P V + AFR+MV G Sbjct: 272 AIPDHENERNRFEIGIPGMLSFLTYDDVNAEVTGLKEFAAEDRPPVLGNFIAFRVMVTAG 331 Query: 398 FLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 +L+ + W + + EK+ L++ A + +PLP+IA AGW VAE+GRQPWA+ VL Sbjct: 332 IILIGFFMVMAWQWRKGNLFEKEKLMKTAFWMLPLPYIANTAGWIVAEWGRQPWAVFGVL 391 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 T A S LTA +++ S+ L +Y+ + ++LM K R ++T H + Sbjct: 392 RTEDAVSHLTAVEVMISLGLFIAIYSFLVWLMVYLMKKEVR--KFDMETSMKHLDH 445 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 186/526 (35%), Positives = 280/526 (53%), Gaps = 58/526 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++R QF +T +YHF FVP+T+ ++ L+A+M+TV++ + Y +TKF+GKLF I Sbjct: 1 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFF+ESTFVGL+ FGW++L Sbjct: 61 NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ +L A+G+ +SA++IL AN WMQNP+ + +N T R E+ F ++ NPV + Sbjct: 121 PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK---GR--------DFAFAKRSFAIAASFG--- 227 FVH ++S Y I I+ W++ K GR + + R++ A+ FG Sbjct: 181 ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV 240 Query: 228 -MAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 + A + V++ GD G M D Q K+AA EA ++ + F++ I +++ +A+ Sbjct: 241 LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNT---SDFSVLTIGNKDGSEEVWAL 297 Query: 287 QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 +IP LG + + V G+ EL K+Y + E + Sbjct: 298 KIPGMLGFLGNGKWGSQVKGINEL------------KSYQVHE--------------YTY 331 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSI---PRVAPLYFAFRIMVACGFLLLAI 403 +KD TP A Q+ + I P V Y+ FRIM+ G ++ + Sbjct: 332 HRKD-------GSQTPLQASYQNVLRQKIDANGIKLEPNVPLSYWTFRIMITLG-MIGGL 383 Query: 404 IALSFWSVIRNRIGEKK--WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV 461 I L +R K WL + LP A+ GW E GRQPW + VLPT Sbjct: 384 IGLVMLIAMRGGRNPKPHGWLTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTA 443 Query: 462 ANS-SLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKT 506 A S +++AG ++FS + +Y + V E+ L +K + G L T Sbjct: 444 AVSPNVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELST 489 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/327 (46%), Positives = 207/327 (63%), Gaps = 6/327 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D++ LSR QFA+T YHFLFVPLT+G+ L+A MET +V + +Y+ M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLAIE L+AFFLESTF+G++ FG D+ Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + W+VALG+N+SALWI+ ANG+MQNP+ + R+E+ +F E+V NP A Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVG--YIERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 FVHTV S Y+ GA F++ +SAW++L+ + F K+SF G+ A + +G + Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGHK 256 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFA-IQIPYALGIIATRS 299 S +Q K AA+EA WET+ + F + IPD + E N + IP T S Sbjct: 257 SASFAAKMQPAKGAALEAVWETKES-LPFHIVQIPDPKNERNIVEFLTIPKLGSYFYTHS 315 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYS 326 D V+G + + +ER + YS Sbjct: 316 FDGKVVGFDQ--IPKDERPNVNIVFYS 340 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 84/138 (60%) Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 D Q KD P V ++++FR+MVA G +A+ F+ +N++ E + L+ Sbjct: 317 DGKVVGFDQIPKDERPNVNIVFYSFRLMVALGLYFVALFWYGFYLYRKNKLVESQRFLKL 376 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLF 485 +Y + LP++A+ AGW VAE GRQPW + ++ TA A S ++ +IFS+V + YT+ Sbjct: 377 VMYSVLLPYVAINAGWVVAEVGRQPWTVYGLMRTAEAVSPISLSQIIFSLVSLVLFYTIL 436 Query: 486 LVAELFLMFKFARLGPSS 503 L+A+++LM K+A+ GP + Sbjct: 437 LIADVYLMLKYAKKGPYT 454 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 165/501 (32%), Positives = 266/501 (53%), Gaps = 57/501 (11%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD + L+R+QFA T ++HF FVP+T+GM FL+AI E++YV +G + YK +TKF+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EFQFG NWS YS +VGD+FG LAIE L+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM---RMEMVSFSELVLN 177 + K H+ WLV++G+ +SA WIL AN +MQ+P+ + + + EM+ F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P +F H V GA I GI++W ML+ + +++F ++ + L + V Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + K+AA EA +E A F++ DQ+++ + +++P L +A Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + + G+K L + +E Sbjct: 301 DKFEGSLKGMKSLQKEMDE----------------------------------------- 319 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV-ACGFLLLAIIALSFWSVIRNRI 416 +Y P V D P V +Y++FRIM + G L+L + + +S R Sbjct: 320 -KYYPVVGKHI---------DYTPHVPTIYYSFRIMSGSVGILILMALLGTIYSFKRTET 369 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 +K+W L+ + + + +A GW +AE GRQP+ I V+ T S + ++FS++ Sbjct: 370 -KKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLFSLL 428 Query: 477 LICGLYTLFLVAELFLMFKFA 497 + C LYT+ + + ++ F++A Sbjct: 429 VFCVLYTILGITQ-YIAFRYA 448 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 280 bits (717), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 171/508 (33%), Positives = 282/508 (55%), Gaps = 27/508 (5%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSR+QFALTA YH++FVP ++GMAF++ ++ T+ ++ ++ + KF+ K GI Sbjct: 1 MDPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F LGV TG+ MEF+FG NWS YS +VG IFG PL +EGL AF LESTF+G+ FG DRL Sbjct: 61 FFVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + ++ V +GS+LS LWIL+AN W Q P + + + R E+ F V NP+ Sbjct: 121 PRAITWISSFFVFIGSSLSGLWILIANSWQQTP--TGYIIQNGRAELTDFMGAVFNPLLV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIA-ASFGMAAVLSVIVLGDE 240 ++ HT+ S +TGA + + A+Y+LK R A+ + AI ++AV+ + G Sbjct: 179 SQYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVVVLAISAVIQLYPTGHA 238 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + Q TKLAA E ++T+ A +FGI D++ + K AI IP L ++ Sbjct: 239 EGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGDW 297 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V+GL + Y EQ+ + + +D+ ++ L+K + Sbjct: 298 NAEVMGLHD------------AARYVWYEQVLNNPNFASEKDRKEFIET------LMKAH 339 Query: 361 --TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 PN DA E Q+ + ++++P VA +++A+R+M+ G L + I + ++ ++ + Sbjct: 340 GVDPNAPDANE-QMVKVLEEALP-VAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGKLYD 397 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSMVL 477 +W L+ + +PLPW+A EAGWF E GR PW + G V + +++A ++ +++ Sbjct: 398 ARWFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLITLIG 457 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLK 505 +Y++ L + K R GP ++ Sbjct: 458 FVVVYSVLFYIWLHFVRKLIREGPEPVE 485 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 177/540 (32%), Positives = 268/540 (49%), Gaps = 86/540 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+FVPLT+G+A +LA+M+T +V++ + +T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS +VGDIFGAPLA EGL+AFF ESTF+GL+ FGW RL Sbjct: 61 NFAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 ++ H+ W+VA+ N SA +I+ AN +MQ+P+ + +N E+ R E+ F L+ N A Sbjct: 121 PRLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAV 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR--------DFAFAKRSFAIAAS-FGMAAVL 232 F H VA +T F+ G+SA+ M++ + + R AI S + A + Sbjct: 181 WAFQHAVAGALLTAGAFVAGVSAFLMVRAQRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYAL 292 + V GD G M D Q K+A+ E+ +T P L ++ + +PY L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GIIATRSVDTPVI-GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +A + G+ +L Q+EER G Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERFGPG------------------------------ 330 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 Y PN+ Y+AFR M+ + +A ++ W Sbjct: 331 -------DYRPNLFVT-------------------YWAFRAMIGLLLVPVAFALVTVWLT 364 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVAN-------- 463 R RI ++W A + IP P++A AGW E GRQPW V+P + Sbjct: 365 RRGRIPHQRWYGWAGVLTIPTPFLANSAGWVFTEMGRQPWV---VVPNPTGDQLVRMTVQ 421 Query: 464 ---SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 S+ +AG ++FS+V+ +Y V LM ++ GP H + + ++P Sbjct: 422 DGVSNHSAGMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQE------HDSEPAPPSKP 475 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 163/495 (32%), Positives = 265/495 (53%), Gaps = 66/495 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M++++ LSRLQFA+TA +HFLFVPLTLG+A L+A+MET+Y + + ++ M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLA+E L AFFLE TF+G + F Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 K++ + W+VALG+N+S+LWIL ANG+MQ+P+ + + ++ M F L+ N Sbjct: 121 RQKLKAFSM-WMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITNGYV 179 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +HT+ + Y+ + ++GI A++ LKG + K+SF IA +A + + VLG Sbjct: 180 WYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVLGHG 239 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 + +Q TK AA++A W + + IQ+P + +T S Sbjct: 240 YAQYVTALQPTKGAAMDAIW---------------ETRSSVPMYLIQVPDS----STGSN 280 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 ++G+ G+ ++ L +GS Sbjct: 281 SVQLLGIP------------GLASF-----LYTGS------------------------- 298 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 T + Q +D +P V ++++FR+M G L + + L + ++ K Sbjct: 299 ----FSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLGLYLQKSGKLYTSK 354 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 L+ ++ IPLP++ + AGW VAE GRQPW + +L TA SS+ D++ S+ LI Sbjct: 355 KYLKLLMWSIPLPYLTITAGWIVAEVGRQPWMVYGLLRTANGVSSVPTSDVLLSISLISA 414 Query: 481 LYTLFLVAELFLMFK 495 Y + L+ E++L+ K Sbjct: 415 FYMVLLIFEIYLIKK 429 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 173/498 (34%), Positives = 264/498 (53%), Gaps = 65/498 (13%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V LSR QFA T +YHFLFVP+T+G+ ++AI++T SG Y+ + F+GKLF INFA Sbjct: 7 VLLSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINFA 66 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +GV TG+ EFQFG NWS YS YVG+IFG PLAIEGL+AFF+ESTF+G++ FG DR+ + Sbjct: 67 IGVVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPRR 126 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H+ WLV++G+ LSA +IL AN WMQ+P+ + T + M +F ++ N + V Sbjct: 127 VHLASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVTL 186 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL----GDE 240 HT+ + ++TG+ +LGIS W + + + FA A + +L +L G Sbjct: 187 FHTLLASFLTGSALVLGISLWQYHRSTE---TREVFAAGARVSLIVMLISALLMGLDGHI 243 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + + Q KLAA EA + T A+ ++ I + ++ F+I IP+ L ++AT Sbjct: 244 DGQVIAETQPMKLAAGEALYNTSRG-ASESILTIGNLHDKP-IFSIGIPHVLSLLATDHW 301 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V G+ +L QA ++++Y Sbjct: 302 NGVVQGINQL---------------------------QAA---------------MVRQY 319 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 P IP VA Y++FRIM G +++ I W + +R+ + + Sbjct: 320 GPG--------------SYIPPVALDYWSFRIMAGIGAVIILIALWGGWLLYHHRLEQSR 365 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 W + AL+ IPLP+IA GW E GRQPW + +L T+ S L+ + ++V Sbjct: 366 WFAKVALWTIPLPFIANTTGWIYTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTV 425 Query: 481 LYTLFLVAELFLMFKFAR 498 LY + V ++ LM ++ R Sbjct: 426 LYGILAVVDISLMVRYGR 443 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 146/332 (43%), Positives = 198/332 (59%), Gaps = 4/332 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR+QFALT M+H+LF PLT+G+A ++A++ Y+ + +Y FW LF Sbjct: 1 MDVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAA 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA EG+ AFFLES F+ + FGWDR+ Sbjct: 61 NFAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFE--TMRMEMVSFSELVLNPV 179 H LVA GS SA+WI+VAN W Q P E R E+ F + VLNP Sbjct: 121 SPRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + V+ +HT+ YV GA F+L ISA+Y+L+GR FAKRSF++A F L ++V GD Sbjct: 181 SVVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 S + + Q KLAA+E +E PA LFG+P EE + IP L ++ R Sbjct: 241 MSARVVAEHQPAKLAAMEGHFED--GPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRD 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQL 331 D P+ GL + + A+ L+ L Sbjct: 299 PDAPIQGLASVPPDARPPVTVPFHAFHLMVAL 330 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 171/520 (32%), Positives = 255/520 (49%), Gaps = 85/520 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSRLQFA T M+H+LF PLT+G+ +L +E +++ + IY+ +FW K+FG+ Sbjct: 1 MDVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ L FGWDR+ Sbjct: 61 NFALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFET------MRMEMVSFSELV 175 G H T +VA+G S++WI VAN W Q P + +R E+V F +V Sbjct: 121 GPKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMV 180 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 NP + +H +V GA F++ ISAWY+LK R FAK+SF A F + + Sbjct: 181 FNPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQL 240 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 G + Q KLAA+E + TQ + LFG PD + + K+ I IP Sbjct: 241 ASGHFQAEGVAHHQPAKLAAMEGLYTTQKQAPVY-LFGWPDSQTKQVKYGIPIP------ 293 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVR--DQFNSMKKDLGY 353 G+ LMV +G ++Q VR DQ + + Sbjct: 294 ----------GMLSLMV--------------------TGDSNQEVRGLDQLDPIW----- 318 Query: 354 GLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 P V + A+ IM+A G + + S + + R Sbjct: 319 -------------------------GTPPVWITFQAYHIMIAIGMIFIVSCTYSCFLLYR 353 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI----------GEVLPTAVAN 463 + E +W+L ++ + L ++A E GW AE GRQPW + G + +A + Sbjct: 354 GTLYETRWVLWYHVFALGLAFLANEMGWVSAEVGRQPWIVYPTLVDGLPTGGLRTSAALS 413 Query: 464 SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 ++ A ++ S++ +Y L V + L+ + GP Sbjct: 414 EAVIAEQVLGSIIFFAIVYGLLFVLWITLLHQKISHGPDD 453 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 273 bits (699), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 177/487 (36%), Positives = 256/487 (52%), Gaps = 81/487 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A L+A+M+T++V++GK + +TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGD+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K+ H+ WLVA+G N SA +I+ AN +MQ+P+ + +N ET R E+ S L+ N A Sbjct: 121 PKLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA-------FAK----------RSFAIAA 224 F H VA ++T F+ G+ W+M++ A AK R I A Sbjct: 181 AAFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKHEETARTMFRPVTILA 240 Query: 225 SFGM-AAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEE-ETN 282 + M A+ + + + GD G M + Q K+A+ E+ T+ A F++ + Q E+ Sbjct: 241 LWVMVASGIGLAITGDIQGKLMFEQQPMKMASAESLCHTETG-ADFSILTVGTQNNCESI 299 Query: 283 KFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRD 342 I+IP +A + D+ V G+ E+ ++EE G Sbjct: 300 TQLIKIPGLTSFLADGTFDSTVEGVTEIQARYEEMYGPG--------------------- 338 Query: 343 QFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV--ACGFLL 400 Y PN+ Y+ FR M+ A G L Sbjct: 339 ----------------NYKPNLFVT-------------------YWTFRAMIGWAAGSAL 363 Query: 401 LAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTA 460 LA++ L W R+ +KKW ++ IP P++ AGW E GRQPW + PT Sbjct: 364 LAVVGL--WMTRGGRVPDKKWFGWLSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPN-PTG 420 Query: 461 VANSSLT 467 V LT Sbjct: 421 VDMIRLT 427 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 170/510 (33%), Positives = 262/510 (51%), Gaps = 66/510 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I+ L+R QFA+T +YHF FVP ++G AF++AIME++YV + + YK M KFWG +F + Sbjct: 1 MTILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TGL EFQFG NWS YS ++GDIFGAPLA+E L++FF+ESTF+GL+ F W ++ Sbjct: 61 SFAVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ + GS SALWIL AN +MQ+P+ + + R MV+F L+ NP Sbjct: 121 KPGLHLFFIWMTSFGSLTSALWILTANSFMQHPVG--YEIKGGRAVMVNFGALLKNPQLW 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA-----FAKRSFAIAASFGMAAVLSVIV 236 +F H + + + G + I G++A+ +LK + + F K+S + + + I Sbjct: 179 YEFGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIA 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 LGD + Q K AA E + T A +T+ GI D ++ K I IPYAL I++ Sbjct: 239 LGDAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILS 298 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 V G+ EL Q++++ YG Sbjct: 299 YHKTTGAVTGMNELNAQYKKK-----------------------------------YGKN 323 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG---FLLLAIIALSFWSVIR 413 L Y P V L+++FRIM A G FL+ + + + Sbjct: 324 LDYYPP--------------------VNTLFYSFRIMCAVGAWIFLVSLVGLIMTREKSK 363 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLI 472 + +++W L LP+I AGWFV E+GR PW + + A + S +++ G L+ Sbjct: 364 KPLAQRRWALWCIAITTFLPFIGNTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLL 423 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGPS 502 S ++ L+T + ++L+ R PS Sbjct: 424 TSNIVYFVLFTTLAITLIWLIVLELRKDPS 453 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 270 bits (691), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 CGLYTLFLVAEL 490 CGLYTLFLVAEL Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 186/547 (34%), Positives = 264/547 (48%), Gaps = 95/547 (17%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++++R QF +T +YHFL VPLT+G+ L+A+++T ++ + K Y MTKFWGKLF I Sbjct: 1 MEALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FGAPLA+E L+AFF+ESTF+GL+ FGW +L Sbjct: 61 NFILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ LGS +SA +ILVAN WMQ+P+ R M + N A Sbjct: 121 PAKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVG--VTVVDGRPRMTDAWAVFTNNTAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYML-------------------------------KG 210 V F HT+ F+LGIS WY L G Sbjct: 179 VAFPHTIFGALAVAGGFLLGIS-WYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPG 237 Query: 211 RDFAFAK---RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPA 267 RD K RS I A M A + GD G M + Q K+AA EA + Sbjct: 238 RDKTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNG---T 294 Query: 268 AFTLFGIPD-QEEETNKFA--IQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKA 324 +F++ I D + N A I+IP L +A T V G+ L+ +++ + Sbjct: 295 SFSVLSIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPEYQAK------- 347 Query: 325 YSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVA 384 YG L P D IQ +P +A Sbjct: 348 ----------------------------YGTNLPD-NPIYGDRAGQPIQY-----VPVMA 373 Query: 385 PLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVA 444 Y+ FR+M+ G + ++F+ R + E KWL+R A++GI P+ A AGW Sbjct: 374 VTYWGFRMMIGFGGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFT 433 Query: 445 EYGRQPWAIGE-----------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLM 493 E GRQP+ + + A + ++ G+LIFS+V +Y + L+ E+FL+ Sbjct: 434 ELGRQPFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLL 493 Query: 494 FKFARLG 500 FK+ R G Sbjct: 494 FKYVRGG 500 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 264 bits (675), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 164/479 (34%), Positives = 254/479 (53%), Gaps = 51/479 (10%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 +LD ++L+R QF +T +YHF+ VP T+GM+ L+A+MET++ +GK+ + T+F+GKLF Sbjct: 8 LLDSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFL 67 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFALGVATG+ EFQFG WS YS +VGDIFGAPLA E L++FF+ESTF+G++ FGW + Sbjct: 68 VNFALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGK 127 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEM---VSFSELVLN 177 + K H+ V WLV G N S LWI+ AN WMQ P+ + FN ET R E+ ++F +V N Sbjct: 128 ISKKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTN 187 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLK-----GRDFAFAKRSFAIAASFGMAAVL 232 + +H V S + A + GIS W+M++ G A+ + A +GM +L Sbjct: 188 STMWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIML 247 Query: 233 SVIVLGDESGYEMGD----VQKTKLAAIEAEWETQPAPAAFTLFG-IPDQ-------EEE 280 + +L SG+ G Q K+AA E + A F PD E Sbjct: 248 AAGLLTVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGENS 307 Query: 281 TNKFAI------QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG 334 +K+ + +IP LG +A S + G+ + + + + N K + Sbjct: 308 GSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF--------- 358 Query: 335 STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV 394 +D+ ++ GL R +VA + A+ P V P++++FR+M+ Sbjct: 359 ------KDKAPNIDTTNTSGL---RGKGDVAGYSWAKYA-------PSVLPVFWSFRLMM 402 Query: 395 ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 G + A+ L + R+ + L AL +P+P++ V GW + E GRQP+ + Sbjct: 403 GVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFIV 461 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 174/520 (33%), Positives = 269/520 (51%), Gaps = 74/520 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+R QFA+T +YHF+ VPLT+G+A L+A M+T +V++ + + +TKF+GKL I Sbjct: 1 METLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG WS YS +VGD+FGAPLA+E L AFF+ESTF+GL+ FGWDRL Sbjct: 61 NFALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ WL+A+ +NLSA +IL AN WMQ+P+ + +N T R EM S ++ N Sbjct: 121 SKKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYML------KGRDFAFAKRSFAIAASFGMAAVL--- 232 F HT+++ ++ F+ GI+ W+M+ K A A+ ++ A G +L Sbjct: 181 AAFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSG 240 Query: 233 -SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGI----PDQEEETNKFAIQ 287 V + GD G M + Q K++A E E++ AAF+L + P ++ T I Sbjct: 241 IGVGISGDVQGRLMYEQQPGKMSAAEGLCESEEG-AAFSLLTVGPWNPTCDDLTR--VIS 297 Query: 288 IPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 +P + T P E + ++ M+A R G+TD+A N + Sbjct: 298 VPGVASFLGTGHFSGP-----ESALPGVNDVQREMEA-------RFGATDEA----GNPI 341 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 YTP + Y++FR+M+ A+ + Sbjct: 342 S-----------YTPPLGIT-------------------YWSFRLMIGLAAFSAALALWA 371 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV------ 461 W+ R R + WL R A+ IP P++A GW E GRQPW + PT + Sbjct: 372 LWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPN-PTGIDQVRLL 430 Query: 462 ----ANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFA 497 ++++ G ++ S+++ LY V L+ ++A Sbjct: 431 TERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYA 470 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 178/509 (34%), Positives = 253/509 (49%), Gaps = 69/509 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V L+RLQFA TA YHF+FVPLT+G+ +LAI ET Y S TKFW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA E L+AFFLESTF+G+ FG R+ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 +M WLV GS LSALWIL+AN WMQ P ++ + + + + F +NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 ++ HT+ + + GA + +SAWY++K R FA ++ + A G+ ++V S Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + + Q TKLA +E ++++ P FG D+E + IP +AT + DT Sbjct: 246 VTVAEEQPTKLAMMEGMYDSEVPP--LYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 GL +L E YG L P Sbjct: 304 EYEGLNQLAASAE-------------------------------------YGALDPETAP 326 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC-GFLLLAIIALSFWSVIRNRIGEKKW 421 V ++ + +MVA G ++L +I +++ +I KW Sbjct: 327 --------------------VNFVFQTYHLMVAMYGLIMLTVILALVFTLRGGKIQNMKW 366 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI--GEVLPTAVA-------NSSLTAGDLI 472 L R L P IA++AGWF AE GRQPW + P V+ + S++A +L+ Sbjct: 367 LQRLVLISPVFPLIAIQAGWFTAEVGRQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELV 426 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGP 501 +MVL +Y +VA M +F + GP Sbjct: 427 ITMVLFLVVYAFLMVAWARTMGRFIKEGP 455 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 137/332 (41%), Positives = 198/332 (59%), Gaps = 4/332 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 D + LSR+QFA+TA +HFL+ PLT+G+A ++ ME YV SG + Y+ MTKFW KLF Sbjct: 3 FDALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAA 62 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA EG+ AFFLES F+ + FGWDR+ Sbjct: 63 TFSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRV 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFE--TMRMEMVSFSELVLNPV 179 H+ + +V GS +SA WI+VAN WMQ P A E MR E+V F +V NP Sbjct: 123 SPKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPS 182 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 +F H + ++ G ++ I+A+Y+LK R FAK+SF +A + + +V+G Sbjct: 183 TVSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGH 242 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 S + + Q +KLAA+E ++T+ A LFG P +E E I IP L + + Sbjct: 243 RSAEVVAEYQPSKLAALEGLFKTEDG-APLYLFGHPSEETE-ETIGIAIPGMLSFLVHQD 300 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQL 331 V GL + + + +AY ++ L Sbjct: 301 FSATVTGLDKFAKEDRPPVWITFQAYHIMVAL 332 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%) Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 AT + + K+ P V + A+ IMVA G + I + + R + E K++L+ Sbjct: 302 SATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFMLQV 361 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAG 469 ++ + P+IA + GW AE GRQPW + +L TA A S +G Sbjct: 362 FIFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAISKSVSG 405 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 257 bits (657), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 172/506 (33%), Positives = 249/506 (49%), Gaps = 69/506 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 + V LSRLQFA+TA++H L+ LT GM L I+E +++ + Y +FW +L+ +N Sbjct: 7 NTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYVLN 66 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F +GVATGL M FQFG NW+ +S VGD FG L EG MAF LE++F+G+ FGWDR+ Sbjct: 67 FGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVP 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + H T LVA+G+NLS WIL AN W+Q P F + + + + NP Sbjct: 127 PLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIF--VDGKFVVQDYFAAIANPFMVN 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 F+H + T I GISAW +L GR F RS + MA I +G S Sbjct: 185 SFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHLSA 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ Q KLAA+EA WET PA + P A ++A Sbjct: 245 EQVSVHQPAKLAAMEALWET--VPA-------------------KTPAAWSVVAL----- 278 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFN-SMKKDLGYGLLLKRYT 361 D+A ++ + S+ L Y L LK Sbjct: 279 --------------------------------PNDKAEKNDWELSIPGALSYILELK--- 303 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR-----I 416 P + + A D V +Y++FRIMVA G A++A++ +R + I Sbjct: 304 PQLDKPIQGLKDWAPVDRPRMVGLIYYSFRIMVAIGLFFAALMAVTVLQWLRGKLKPEII 363 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 ++KWLLRA ++ PL ++AVE GW V GRQPW + + TA + S+L G+++FS+ Sbjct: 364 SQQKWLLRAWVFAAPLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEILFSLT 423 Query: 477 LICGLYTLFLVAELFLMFKFARLGPS 502 + +Y +FL+A L+ + R GP Sbjct: 424 GLSVMYIVFLIATLYFGSRIIRNGPD 449 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 163/482 (33%), Positives = 239/482 (49%), Gaps = 65/482 (13%) Query: 25 LTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYY 84 LT GMA L ++E +++ + Y +FW KL+ +NF +GVA+GL M FQFG NW+ + Sbjct: 6 LTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGLNWAPF 65 Query: 85 SHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWI 144 S VGD FG L EG MAF LE++F+G+ FGWDR+ V H T LVA G+NLS WI Sbjct: 66 SESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANLSTFWI 125 Query: 145 LVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISA 204 L AN W+Q P +F + + + + + NP F+HT + T I GISA Sbjct: 126 LSANSWLQTPAGGEFI--AGKFVVQDYFQAIANPFMVNSFLHTFFATLETSLFVIGGISA 183 Query: 205 WYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQP 264 WY++ R F RSF + + + + +G S ++ Q KLAA+EA+WET P Sbjct: 184 WYIINQRRTEFFLRSFKVILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQWETVP 243 Query: 265 A--PAAFTLFGIPDQEEETNKFAIQIPYALGII--ATRSVDTPVIGLKELMVQHEERIRN 320 A PA ++L +P+ + E N++ I++P AL + +D PV GLKE E + R Sbjct: 244 AGEPADWSLLAVPNNKVEKNEWEIKVPGALSYLLELKSKLDQPVKGLKEW----EPKNR- 298 Query: 321 GMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSI 380 Q V + S + +G GL L Sbjct: 299 ----------------PQMVGLIYYSFRIMVGIGLFL----------------------- 319 Query: 381 PRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAG 440 G +L+ +I + I ++KWL+RA ++ PL +IAVE G Sbjct: 320 ---------------AGLMLITVIQWLSGKLSTTTITQQKWLMRAWIFAGPLGYIAVETG 364 Query: 441 WFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLG 500 W V GRQPW + L T A S + G+++FS+V + +Y +F VA L+ + R G Sbjct: 365 WIVRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGSRIIRKG 424 Query: 501 PS 502 P+ Sbjct: 425 PN 426 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 175/516 (33%), Positives = 266/516 (51%), Gaps = 71/516 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKD----MTKFWGK 57 +D + LSR QFA+T +YHFLFVP+TLG++ +A++ET YV + + +K+ + +F+G Sbjct: 1 MDALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+E L AFFLESTF+G++ FG Sbjct: 61 LFVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WD+L + H W+VA SNLSA WILVAN +MQ+P+ F R EM F LV N Sbjct: 121 WDKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVG--FAVRNGRAEMTDFFALVTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKG----RDFAFAKRSFAIAASFGMAAVLS 233 P ++ HT+ S T ++ +SAW +L R F ++ A+ FG+ A + Sbjct: 179 PYVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMG 238 Query: 234 VIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALG 293 G + V KL+++EA WET+ PA F + D++ N F + +P A Sbjct: 239 S---GHLQAQYIAQVNPMKLSSVEALWETED-PAPFAIVADIDEDMHKNNFELTVPGAFS 294 Query: 294 IIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGY 353 + + V G+ N ++KD Sbjct: 295 FMLYNTPTGAVPGI-------------------------------------NQIQKDYS- 316 Query: 354 GLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 ++Y P+ + P V L+++FRIM+ G L++ + + + Sbjct: 317 ----EKYGPD--------------EYRPDVTGLFWSFRIMIGLGGLMILLGLAAAYFGFT 358 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLI 472 NR L+ + +PLP++A GW+VAE GRQPW + + T+ A S +LT D+ Sbjct: 359 NRPLACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVW 418 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 +M LY + +A L++ +F + S + GR Sbjct: 419 LTMAGFTVLYLVLAIAALWIAMRFIKKTQISFEEGR 454 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 158/507 (31%), Positives = 258/507 (50%), Gaps = 77/507 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ L+R+QFALT M+H+++ L++G+ ++ I+E +Y+ + IY M +FW K+F + Sbjct: 1 MDVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ + FGW+R+ Sbjct: 61 TFAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 H T +V LG++ SA+WI++AN WMQ P E M R E+ F E+V NP Sbjct: 121 SPKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++ H + ++ GA ++ ISA+Y+LK + FA++S I + GD Sbjct: 181 SMIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 SG + Q TKLAA+EA ++T+ TLFG+ + E Sbjct: 241 SSGKVVAKYQPTKLAAMEALYQTESG-VPLTLFGVVNTE--------------------- 278 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 E++I ++ LL L G FN+ K L Sbjct: 279 ---------------EKKIDYAIQIPKLLSFLSFG--------DFNAEMKGL-------- 307 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLL--LAIIALSFW--SVIRNR 415 Q + P V ++ +R+M+A L+ L+I L W + N Sbjct: 308 -------------DQVNPEDWPNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYKKTLENH 354 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFS 474 G ++ +A+Y +A +AGW+ AE GR PW + +L + + S+ A ++ S Sbjct: 355 RGILWLMVFSAIYAQ----VANQAGWYSAETGRYPWLVYGLLRISEGLSKSVKANQVLGS 410 Query: 475 MVLICGLYTLFLVAELFLMFKFARLGP 501 +++ +Y L + ++++ + + GP Sbjct: 411 IIMFMCVYLLLFILFVYMLNEKVKHGP 437 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 162/515 (31%), Positives = 257/515 (49%), Gaps = 76/515 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I L+R QFA+T ++HF FVP T+G F++AIMET+YV++ + YK MTKFWG + + Sbjct: 1 MTIETLARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD-- 119 +FA+GV TG+ EFQFG NWS YS +VGDIFGAPLAIE L+AFF+ESTF+GL+ F WD Sbjct: 61 SFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNK 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 ++ K H+ WLV GS +SA+WIL+AN +MQ+P+ + R +M F L+ N Sbjct: 121 KISKKLHVTFIWLVVFGSLMSAMWILIANSFMQHPVG--YEVVNGRAQMTDFFALINNHQ 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFA-----FAKRSFAIAASFGMAAVLSV 234 + +F H + G + I G+SA+ +LK + K+S + + +SV Sbjct: 179 FRYEFGHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISV 238 Query: 235 IVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGI 294 + +GD + + Q K AA+E ++E PAA+T+ ++ ++ F I+IPY L I Sbjct: 239 MGVGDLQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSI 298 Query: 295 IATRSVDTPVIGL----KELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKD 350 ++ V G+ KEL+ ++ + D + M Sbjct: 299 LSYGKPSGSVKGMDTANKELVAKYGQ-------------------------DNYFPMVNL 333 Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 L YG FR M A G ++L + AL + Sbjct: 334 LFYG-----------------------------------FRTMAAFGTMMLGVSALGLFL 358 Query: 411 VIRNR--IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLT 467 + + + KW+L P+++ GW + E GR PW + + + S +++ Sbjct: 359 TRPKKPILYDHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVS 418 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 L+FS + L++ ++L+ + + GP Sbjct: 419 VASLLFSNTVYFLLFSCLGAMMVYLVIRELQKGPE 453 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 248 bits (633), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 154/463 (33%), Positives = 245/463 (52%), Gaps = 71/463 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++++R QF +T +YHF+FVPLT+G+A L+A+M+T + ++GK+ + T+F+G + I Sbjct: 1 MDVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+EGL+AFFLES F+GL+ FGW ++ Sbjct: 61 NFAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W+VA+ +N+SA +I+VAN +MQ+P+ + +N ET R E+ L+ NP A Sbjct: 121 PGWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFG----MAAVLSVIVL 237 F H VA +T F++GI W++++ + R F A G + A+++V V Sbjct: 181 AAFPHAVAGSLLTAGTFVVGICGWWLIRASK-QESHRMFRPALWMGWWTTVIALIAVAVT 239 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEE-ETNKFAIQIPYALGIIA 296 GD M Q K+A+ E+ T+ P F++ I + ++ I++P+ L +A Sbjct: 240 GDIQAKLMFQQQPMKMASAESLCHTETDP-NFSILTIGTHNDCDSVIHLIEMPWVLPFLA 298 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 E +G T + V+D + G G Sbjct: 299 --------------------------------EGRFTGVTLEGVQDLQAKAESLYGPG-- 324 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 Y PN+ Y++FR M+ L++ +A++F S + R Sbjct: 325 --NYAPNLFVT-------------------YWSFRAMIG---LMVGSLAIAFISWLLLRK 360 Query: 417 GEK------KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 G +W +L IP+P++A AGW E GRQPW + Sbjct: 361 GRTPTGRIARWFAWGSLAVIPMPFLANSAGWIFTEMGRQPWVV 403 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 248 bits (633), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 170/503 (33%), Positives = 255/503 (50%), Gaps = 63/503 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+RLQFA T++YHF FVP+T+GMA L+A++ T + G K + +F+G L I Sbjct: 1 MDQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + ++GV TGL EFQFG NWS YS +VGD+FGAPLA+EGL AFFLESTF+GL+ FG++ L Sbjct: 61 SISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VALG+ LSAL+I+ AN WMQNP N +T R ++ S ++ NPV Sbjct: 121 PRRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFI 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 ++H + + G +L +SAW + + F A G+ A+L VL Sbjct: 181 WGYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHV 240 Query: 242 GYEMG----DVQKTKLAAIEAEWET-QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 G ++G Q K+AA EA W+T QP + G ++ K I+IP+ L ++A Sbjct: 241 GGQLGINETSYQPMKIAAAEANWQTCQPCSFSMLQIGGWTADDPPTKI-IEIPHLLSLLA 299 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 T + + V GL L Q++++ G Sbjct: 300 TGTWNGEVQGLTPLNEQYQQQYGPG----------------------------------- 324 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 Y PNV IQ Y++ R+M L+ W R ++ Sbjct: 325 --EYVPNVF------IQ-------------YWSMRVMAYLATLVALFGVWGIWLWWRKKL 363 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSM 475 + L A + + P++ AGWF+ E GRQPW + G +L + S +AG ++ S+ Sbjct: 364 ATARVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVSL 423 Query: 476 VLICGLYTLFLVAELFLMFKFAR 498 ++ LYT V LM + AR Sbjct: 424 SIVVVLYTTIGVIAAILMLRHAR 446 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 173/517 (33%), Positives = 251/517 (48%), Gaps = 90/517 (17%) Query: 1 MLD-IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF 59 MLD + LSR QFA+TA++H L+ LT+ ++ L ++E +++ +G +Y +FW KL Sbjct: 1 MLDHVANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLL 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +NFA+GV +G+ MEFQFGTNW+ +S Y G G L EG MAF LE+ FVG+ GW Sbjct: 61 VLNFAVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWG 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 R+ + H+ T +VALGS++SA WI+VAN WMQ P + + ++E+ + + NP Sbjct: 121 RVPRGVHLFATSMVALGSSISAFWIMVANSWMQTP--AGYAVVNGKIEVTDYLVAIFNPD 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 H + TG I GISA+ + + R F RSF IA S + A I LGD Sbjct: 179 MVWGVSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIALSVLVVAAPLQIWLGD 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAP--AAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 SG + + Q K AAIE W T + A+++L PDQ+ + N + Sbjct: 239 SSGVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDW------------- 285 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 S++ P G+ ++ H SL Q++ G TD A DQ Sbjct: 286 -SLEVP--GMLSVLGTH-----------SLHGQVK-GLTDFAREDQ-------------- 316 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV--IRNR 415 P + LY+AFR M G L + L+FW+ +R Sbjct: 317 ----------------------PPMIPLLYYAFRAMAGIG---LCFMLLAFWTAYALRKA 351 Query: 416 IGE-----------KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS 464 G W+L IPLP++AVEAGW V E GRQPW + +L T+ A S Sbjct: 352 RGSLDALLARRKLLLAWVL-----CIPLPYVAVEAGWIVREVGRQPWVVYGLLRTSQAAS 406 Query: 465 SLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 ++ + SM + Y + LV L ++ R GP Sbjct: 407 TVAPSAVSLSMAMFFAFYAVLLVTFFVLACRWLRKGP 443 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 162/519 (31%), Positives = 251/519 (48%), Gaps = 79/519 (15%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 LSR+QFA T +H LF ++G++ L I E +++++ Y + KFW K+F + F +G Sbjct: 7 LSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFALTFGMG 66 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R+ K H Sbjct: 67 VVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGRINKYVH 126 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + + G LSA WIL AN WMQ P N+ + E+ S+ ++ NP +++H Sbjct: 127 FLANFTIFAGVTLSAFWILSANSWMQTP--DGVNYINGKFEVYSWYHVIFNPSVIPRYIH 184 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSV--IVLGDESGYE 244 + + Y++ M ILG+SA+Y++K + +FAK I S +LSV + +GD+ G E Sbjct: 185 MLMAAYLSTLMVILGVSAYYIIKDKHHSFAKT--CIKFSIVSILILSVGQLAVGDDVGRE 242 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + + Q K AAIE W+TQ A F +F P + +E N F+I+IP +I T +D + Sbjct: 243 VHEHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHELDGEL 301 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 IGLK V ++R V F S + +G G L+ Sbjct: 302 IGLKS--VPEKDR--------------------PVVAVVFYSFRIMVGIGTLMI------ 333 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 +M G +LLA R ++ KW LR Sbjct: 334 ---------------------------LMGVVGTILLA----------RKKLQTSKWFLR 356 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTL 484 PL ++A+ GWF AE+GRQPW + +L T + S + + S+ I +Y Sbjct: 357 LCTLTTPLGFVAIITGWFTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIIIVY-- 414 Query: 485 FLVAELF---LMFKFARLGPSSLKTGR--YHFEQSSTTT 518 F++ F +F+ GPS+ R Y + QS T Sbjct: 415 FVIFGFFYFRYLFRIINGGPSTGGEERMPYSYFQSVEKT 453 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 163/473 (34%), Positives = 245/473 (51%), Gaps = 38/473 (8%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QF +T +YHF+FVPLT+G+A L+A+M+T + ++ K + T+F+G + + Sbjct: 16 LDTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLV 75 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS VGD+FG PLA+EGL+AFF+ES F+G++ FGW R+ Sbjct: 76 NFAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRI 135 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W VAL NLSA +I+VAN +MQ+P+ ++FN ET R E+ L+ NP A Sbjct: 136 PTWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTAL 195 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H VA ++T F+LG+S W+++K A AK A G+A D + Sbjct: 196 AAFPHAVAGSFLTAGTFVLGVSGWWLIKD---ARAKAKTATTTQDGLAL--------DNA 244 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEET-NKFAIQIPYALGIIATRSV 300 T AA + AP++ D + + ++ A+++ I+++ V Sbjct: 245 PAAEASASGTNTAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGV 304 Query: 301 -DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGS-------TDQAVRDQFNSMKKD-- 350 T I K + VQ ++ + A SL S T + +K Sbjct: 305 FITGDIQAKLMFVQQPMKMAS---AESLCHTETDPSFSILTIGTHNNCESVIHVLKAPFV 361 Query: 351 ---LGYGLLLKRYTPNVADATE-AQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 L G V D E A+ + P + Y++FR M+ L++ +AL Sbjct: 362 LPFLAEGKFSGVTLQGVMDLQEKAEALYGPGNYSPNLFVTYWSFRAMIG---LMVGSLAL 418 Query: 407 SFWSVI---RNRIGEKKW---LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 +F++ + + R+ + KW L IP P++A +GW E GRQPW I Sbjct: 419 AFFAWLFTRKGRLPKGKWATIFSWGCLAAIPFPFLANSSGWIFTEMGRQPWVI 471 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 162/522 (31%), Positives = 251/522 (48%), Gaps = 69/522 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 L+ ++L+R+QFA T +H LF +T+G+A LA++E +++ + +Y+D+ FW K+F + Sbjct: 4 LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW+R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H T +VA+G+ +S WIL +N WMQ P F R+ + +V NP Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTP--QGFEIIDGRVIPTDWFAVVFNPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H + +V A F+ +AW++L+GRD ++ ++A + V+GD Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241 Query: 242 GYEMGDVQKTKLAAIEAEWET-QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G Q K+AAIE WE P LFGIPD +EE K+A V Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYA--------------V 287 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + P +G L++ H SL +Q+ + LK + Sbjct: 288 EIPYLG--SLILTH-----------SLDKQVPA-----------------------LKEF 311 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 P + P ++++FR+MVA G L++ S W R + + Sbjct: 312 KP---------------EDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTLYNSR 356 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 L AL+ P IA+ AGWF E GRQPW + ++ TA A+S + + ++VL Sbjct: 357 PFLYLALWMGPSGLIAILAGWFTTEIGRQPWVVYGLMRTADASSGHSVAQMSITLVLFVV 416 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 +Y + L M + R GP + H T PAR Sbjct: 417 VYFVLFGTGLGYMMRLVRKGPKAYVEHVPHGGPGQQRT-PAR 457 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 165/520 (31%), Positives = 267/520 (51%), Gaps = 64/520 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ EL+R QF +T +YHF VPLT+G++ L+A+M+T SG ++ T F+GK+ I Sbjct: 1 MEAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFFLESTF+GL+ FG +RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRL 120 Query: 122 G-KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMV---SFSELVLN 177 ++ +MC+ WL+A+G+ LS +IL AN +MQNP + N +T R+E+ F ++ + Sbjct: 121 SPRLHNMCI-WLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFS 179 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF----AKRSFAIAASFGMAAVLS 233 + F HT+++ ++ + G+ W+M + R A++ + AA G+ A+L Sbjct: 180 ETSLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLV 239 Query: 234 VIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALG 293 + SG+ MG K + QPA AA + G+ + E + Sbjct: 240 SSCIAIGSGHFMGQHVK----------DIQPAKAA-AMMGVCESGESHDL---------- 278 Query: 294 IIA--TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +IA T D P + L G++++ + D N+ K Sbjct: 279 VIAMWTSDCDGPQLTLP---------FPGGLESFMATNHFSGKESFLKGLDDVNAELK-- 327 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 A A + + +D P + +++FR M+ GFL LA+ +S+ Sbjct: 328 ---------------AKYADVYGSDQDYRPNLTVAFWSFRAMMGIGFLGLAMSIFGLYSL 372 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE------VLPTAVANSS 465 ++I + + + R L IPLP++ GW + E GRQPW + ++ ++S Sbjct: 373 RGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQGLSNS 432 Query: 466 LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 ++ G ++ SM + LY+ V + L+ ++A G + K Sbjct: 433 VSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEGIDTRK 472 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 154/500 (30%), Positives = 245/500 (49%), Gaps = 71/500 (14%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 ++L+R+QFA T +H +F L++G+A +A++E ++ +GK YK + FW K+F + F Sbjct: 155 LDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAVAFG 214 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +GV +G+ M +QFGTNWS +S + G + G L E + AFFLE+ F+G+ FGW+R+ Sbjct: 215 MGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRVSPR 274 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFS--ELVLNPVAQV 182 H T +VA+G+ +S WIL +N WMQ P FE + ++V ++ NP Sbjct: 275 AHFGATLMVAIGTLISTFWILASNSWMQTPQ----GFEIVDGQVVPTDWFAIIFNPSFPY 330 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H + +V A+ + +AW++LKGR K+ F+++ + V+GD+ G Sbjct: 331 RLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQHG 390 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 Q KLAAIE WET+P A LFGIPD + +T ++A V Sbjct: 391 INTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYA--------------VSI 436 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 P +G L++ H S D +R LK + P Sbjct: 437 PHLG--SLILTH--------------------SWDGEIRG--------------LKSFPP 460 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 P ++++FRIMV G ++ + AL++ R R+ E KW Sbjct: 461 Q---------------DRPNSTVVFWSFRIMVGLGLAMIGLAALAWLLRRRGRLYEAKWF 505 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 R AL P ++++ AGW E GRQPW + V+ T+ A S L+ + S++ +Y Sbjct: 506 HRFALAMGPTGFVSLLAGWVTTEVGRQPWVVYGVMRTSHAVSPLSTQQVSVSLMTFVVVY 565 Query: 483 TLFLVAELFLMFKFARLGPS 502 L ++ M K R GP+ Sbjct: 566 FLVFGTGVYYMLKLMRKGPA 585 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 162/463 (34%), Positives = 245/463 (52%), Gaps = 57/463 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ +EL+RLQF T + HF + +++G+ F +A M+T + +G + + +T+F+GKL + Sbjct: 1 MNSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+EGL AFF+E+ F+GL+ FGW RL Sbjct: 61 SFAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VA + +SA ILVAN WMQ+P+ + + R+ ++ N Sbjct: 121 PRRLHLACVWIVAGATVVSAYAILVANSWMQHPVGYELVDGSARL--TDIVPVLFNLTVG 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H V+ + G + +L I+A+++L+GRD A +A G+ A LS G Sbjct: 179 LTVAHVVSGALLAGTVVVLAIAAFHLLRGRDSAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q K+AA EA +ET+ PA +LF ALG ++T Sbjct: 239 GMLAMKQQPMKMAAAEALYETEK-PAGLSLF------------------ALGGLSTNP-- 277 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 EL+V + A SL+ QL + ST + + D Sbjct: 278 ------GELIVDLKVP-----AALSLINQLSTQSTVRGINDL------------------ 308 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 TEA+ + D +P V +Y++FR MV G L+AI+AL W +R+R+ + Sbjct: 309 -----QTEAEQRYGPGDYVPVVGLMYWSFRTMVGGGTALIAIMALGCWLAVRDRLAGSRR 363 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS 464 L+ AL LP++A GW + E GRQPW I +L T VANS Sbjct: 364 FLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANS 406 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 241 bits (614), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 170/531 (32%), Positives = 264/531 (49%), Gaps = 63/531 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A ++AIM+TV+ ++G + + TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +V D+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WL A+G SA +I+ AN WMQ+P+ +++ E R M F ++ N Sbjct: 121 PRKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H +A ++T F+ + W+M R+ AK+ + I GD S Sbjct: 181 AAFPHVLAGAWLTAGTFVAAVGIWWM--ARNTWRAKK------------LREAIETGDTS 226 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIP-YALGIIATRSV 300 G + T + I+A E D E + + + ++L II V Sbjct: 227 GMP----KTTSPSQIDATPE--------------DLERDARQLWRPVTRFSLWIIMISGV 268 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGST-------DQAVRDQFNSMKKDLGY 353 + G + + +++ A SL + +G+ Q D + + + G Sbjct: 269 ALFITGDLQAQIMFKQQPMKMASAESLCDSTTAGAPFSVLSIGRQNNCDNVDHVVEIPGM 328 Query: 354 GLLL--KRYTPNVADATEAQIQQATKDSIP--RVAP----LYFAFRIMV--ACGFLLLAI 403 L R+ + + Q+Q +P AP Y+ FR M+ A G +++A+ Sbjct: 329 LSFLADHRFDTPLQGVNQLQVQYQEALQMPGQNFAPNLFVTYWGFRAMITWALGSVVVAL 388 Query: 404 IALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG-----EVLP 458 L W R R+ E + AL IP P++A +GW E GRQPW + + P Sbjct: 389 GGL--WLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIFTEMGRQPWVVAPNWQDNLDP 446 Query: 459 TAV------ANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 T + S+ TA + +++ LY V L ++ GP++ Sbjct: 447 TRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFMLQRRYVIEGPAT 497 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 240 bits (613), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 173/506 (34%), Positives = 245/506 (48%), Gaps = 67/506 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QFALTA++H L+ LT GM+ L ++E +++ + Y +FW KL+ + Sbjct: 6 LDTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYIL 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GVA+GL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ Sbjct: 66 NFGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRV 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 V H T VA G+NLS WIL AN W+Q P F R++ + + + NP Sbjct: 126 PPVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVFVEGKFRVQ--DYFQAIANPFMV 183 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H + T I GISAWY+L+ R F +S + + + +G S Sbjct: 184 KSFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMALVIAPLQVFVGHLS 243 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAA+EA WET PA G P D Sbjct: 244 AEQVYHYQPAKLAAMEALWETVPA-------GTP------------------------AD 272 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 VI L + E +K +LL L A+R + ++ LG LK + Sbjct: 273 WSVIALPN---EAAETNTFEVKIPALLSYLL------ALRPKLDT--PILG----LKEWA 317 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLL--LAIIALSFW---SVIRNRI 416 P+ D V +Y++FR+MVA G L LAI+ + W + +R+ Sbjct: 318 PS--------------DRPHLVGLIYYSFRLMVAIGLYLAALAIVTIFVWWRTGLEGDRL 363 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 +WL ++ PL ++AVEAGW V GRQPW + L TA A S L ++FS+ Sbjct: 364 RNYQWLWWGWIFAGPLGYLAVEAGWIVRCVGRQPWIVYGQLRTAEAASDLPPQVVLFSLS 423 Query: 477 LICGLYTLFLVAELFLMFKFARLGPS 502 + LYT+F A LF + + GP+ Sbjct: 424 GLVALYTIFFFAALFFGSRIIQKGPN 449 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 132/321 (41%), Positives = 194/321 (60%), Gaps = 10/321 (3%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D V LSRLQFA+T M+H++F P+T+G+ +L +E +++ + +Y KFW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA EG+ AFFLES F+ + FGWD+ Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRME--MVSFSELVLNP 178 +G H + +VALG++ SA+WI+VAN WMQ P +++ + SF ++V NP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + H +A ++ GA +L +SAWY+LK R +++SF +A G+ V + + G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGI--PDQEEETNKFAIQIPYALGIIA 296 D S E+ Q K AA+E E+ AP L G P E T I IPY L ++ Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMESG-APQDLHLIGWMNPSTHEVT---GISIPYLLTLLT 296 Query: 297 TRSVDTPVIGLKELMVQHEER 317 +DT + G+ + + +ER Sbjct: 297 HHDLDTSITGMND--IPQDER 315 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%) Query: 377 KDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIA 436 +D P + P++++F +M+ G L A+ W R + +K+WLL ++ + P IA Sbjct: 312 QDERPPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFSVLGPQIA 371 Query: 437 VEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSM 475 +AGW VAE GRQPW + +L T A S +LTA + + S+ Sbjct: 372 NQAGWAVAELGRQPWIVYGILRTEHAVSPTLTAAEALSSL 411 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 169/498 (33%), Positives = 249/498 (50%), Gaps = 68/498 (13%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R QFA+ ++HF FVP+T+G+ L+A++ T+ ++ +T+F+ +F I+ A+G Sbjct: 5 LARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISMAVG 64 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V TG+ +EFQFG NWS YS +VG+IFGAPLAIEGL+AFFLESTF+GL+ FG DRL H Sbjct: 65 VVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPPRVH 124 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + WLV++G+ LSA +IL AN WMQ+P+ + E + + +F ++ N F H Sbjct: 125 LATIWLVSIGTLLSAFFILAANAWMQHPVG--YRVENGKAVLTNFWAVLGNSTLWWSFAH 182 Query: 187 TVASGYVTGAMFILGISAWYMLKGRD-----FAFAKRSFAIAASFGMAAVLSVIVLGDES 241 TV + TG +LGI+ + + D AF K + A A +L+ V GD Sbjct: 183 TVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTA-VSGDGQ 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 M Q K+AA EA ++T A+F+L I D F I++P L +IAT + + Sbjct: 242 ARLMDTQQPMKMAAAEALYDTTRG-ASFSLLTIGDLSGNP-IFQIRVPGLLSLIATLNPE 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V+ G+ EQ R GS Sbjct: 300 GEVL---------------GIHQIQQAEQARYGS-------------------------- 318 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG-EKK 420 +P + Y++FRIMV G LL+ + +R R G E + Sbjct: 319 ---------------GSYVPVIWLTYWSFRIMVGAGILLVLLPLWIL-WRMRRRTGFEGR 362 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WL R AL GI LP +A AGW E GRQPW + ++ TA S++ D+ ++ Sbjct: 363 WLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSFVA 422 Query: 481 LYTLFLVAELFLMFKFAR 498 +YT+ L+ + AR Sbjct: 423 VYTILGFIAAVLIARAAR 440 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 237 bits (604), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 177/545 (32%), Positives = 268/545 (49%), Gaps = 97/545 (17%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+R QF +T +YHFLFVPLT+G+ +A ++T + +GK+ Y +TKF+GKLF I Sbjct: 1 MDALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GSNLSA +IL AN WM++P+ + + M ++ N A Sbjct: 121 PKRVHLATIWAAVIGSNLSAYFILAANAWMKHPVG--YEVVDGKARMTDLWAVLTNSSAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR----DFAFAKRSFA-------IAASFGMAA 230 + H V + +V F+L + +++L+ R D R A + A+ M A Sbjct: 179 AQVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTA 238 Query: 231 VLSVIVL--GDESGYEMGDVQKTKLAAIEA-EWETQPAPAAFTLFGIPDQEEETNKFAIQ 287 + V+V GD S + + Q KLAA E +T AP + +P ++ Sbjct: 239 IAGVVVAGSGDMSAKLLYEQQPMKLAAAEGLRHDTAGAPFS----PVP---------GVE 285 Query: 288 IPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 +P L +AT V G ++L + E Sbjct: 286 VPMLLSFLATNDPSAVVHGTEDLQARFE-------------------------------- 313 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 K+ G G Y PN +P V +++FR+M+ G +A+ L Sbjct: 314 -KEFGPG----DYRPN----------------LPVV---FWSFRVMITFGMATVALSVLG 349 Query: 408 FWSVIRNRIGE------KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTA 460 W + R WL RA + +PLP IA+ +GW ++E GRQPW + GE+L A Sbjct: 350 LWLTRKRRRDPRPPRELPTWLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAA 409 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG-----RYHFEQSS 515 + ++ ++ S+ + LY + +AE L+ + + GP G E S+ Sbjct: 410 SVSPGVSLTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPEPAAPGPLTPPSRDDEDSA 469 Query: 516 TTTQP 520 QP Sbjct: 470 ARLQP 474 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 162/520 (31%), Positives = 261/520 (50%), Gaps = 61/520 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V+++R QF +T +YHFL VPLT+G+ L+A+M T++V +GK + MT+FWG+++ I Sbjct: 6 IDVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLI 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FG+ LA+E L+AFFLESTF+GL+ FGW R+ Sbjct: 66 NFVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRI 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GS +SA +I+ AN WMQ+P+ + + T R V F ++ N A Sbjct: 126 PKELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTAL 185 Query: 182 VKFVHTVASGYVTGAMFILGISAWYM----LKGR-----DFAFAKRSFAIAASFGMAAVL 232 F H V + + ++GI W++ L G+ D A +RS + +AA + Sbjct: 186 AAFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFV 245 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQ-PAPAAFTLFGIPDQEEETNKFAIQIPYA 291 V + GD G M + Q K+++ EA ET+ PAP + + E + +I IP Sbjct: 246 LVALTGDWQGKLMYEQQPLKMSSAEALCETEAPAPFSVLAWSKLGSNECDDVHSITIPGL 305 Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 + +A + V G+ +L ++ G T +F ++ + Sbjct: 306 VSFLAHGDFSSAVPGVNQLQEEYAAVY---------------GETYPDDPSRFGALAGE- 349 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 D P +A Y++FR+M+ G + + A + W+ Sbjct: 350 ------------------------EIDYTPLLAVSYWSFRLMIGMGAVSAGVAAYALWAT 385 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS------ 465 + R+ + + +L + P++A GW E GRQP+ + V + Sbjct: 386 RKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQTYFFTAQ 445 Query: 466 -----LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLG 500 +TA ++ S+ L+ +Y V EL+L+ +F R G Sbjct: 446 AVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRG 485 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 161/499 (32%), Positives = 242/499 (48%), Gaps = 63/499 (12%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 ++LSR QFA T+++H+ FVP T+G A ++AI++T+ +G +++T+F+G LF INFA Sbjct: 10 LDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFINFA 69 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +GV TG+ EFQFG NW +S++VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 70 VGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKIPAW 129 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 + W+VALG+ +SA WI++AN WMQ+P+ F + R M +V NP F Sbjct: 130 LSLASIWIVALGTTVSAFWIIIANAWMQHPVG--FEIKNGRAVMTDAWAIVTNPKGLEWF 187 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H A GA F+L +SA+++ + + + SF +A + VI G G Sbjct: 188 AHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQGQS 247 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAF--TLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 Q K AA A WET PA +L +P N+F I +PY +A + Sbjct: 248 AVRDQPMKYAAFSALWET-PAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNFTG 306 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 GL EL ++E R G+ V + + + +G G L+ Sbjct: 307 KAKGLNELQAEYEAR-------------YGPGNYIPFVWPVYWAFRVMVGLGFLMLL--- 350 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 VA + +Q D R+ PL A Sbjct: 351 -VALVYVWRWRQGKLDDPGRLYPLLLA--------------------------------- 376 Query: 423 LRAALYGIPL-PWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 +PL P +A GW E GRQPW + +L T A S+L ++ S+V + Sbjct: 377 -------MPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWVV 429 Query: 482 YTLFLVAELFLMFKFARLG 500 Y + ++FL+ + AR G Sbjct: 430 YLTLIGLDVFLLTRTARAG 448 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 163/507 (32%), Positives = 231/507 (45%), Gaps = 80/507 (15%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R QF AM+H ++ PLT+G+A +L ME +V + Y KFW KLF INF +G Sbjct: 10 LARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFLINFGVG 69 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R+G H Sbjct: 70 VISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGRVGPKMH 129 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + T +VA GS LSA WI+VAN WMQ P + + + ++ + V NP F H Sbjct: 130 LFATGMVAFGSTLSAFWIMVANSWMQTP--AGVKLVDGKFAITNWYDAVFNPDLPYGFGH 187 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAA-SFGMAAVLSVIVLGDESGYEM 245 + + + G+SA+Y+LK R F + +F A S + A L + + GD +G + Sbjct: 188 MFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVISLFIVAPLQIFI-GDSAGSSL 246 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVI 305 + Q KLAAIEA W T NK P+AL I + Sbjct: 247 AETQPAKLAAIEAHWHT-------------------NKPGEGAPWALLAIPNQ------- 280 Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL---LLKRYTP 362 +DQ N ++ GL + K T Sbjct: 281 -----------------------------------KDQKNDWALEIPDGLSMIVTKTMTG 305 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR------- 415 V + D P V ++AFR+MVA G + + + W + R R Sbjct: 306 KVVG-----LDHFKPDDQPPVWIPFYAFRVMVAAGVFVAFMAFWTLWMLWRKRERMTAAR 360 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 I E KWLLR L +P + AVEAGW E GRQPW + ++ T+ S+L A +++S+ Sbjct: 361 ISENKWLLRGWLLAVPAIYAAVEAGWMTREVGRQPWIVYGMMRTSQGVSNLPADTVLWSL 420 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPS 502 + Y + V + R GPS Sbjct: 421 AMYMLFYGVIGVTAFVFAARMIRKGPS 447 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 140/480 (29%), Positives = 244/480 (50%), Gaps = 71/480 (14%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M +++ R+QFA T +H+LF LT+G++ ++ + Y+ + + Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LA+EG+ +FFLES+F+GLF FG Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LG H L+ +GS S I+ + WMQNP+ + E + + +F L LNP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGM-AAVLSVIVLGD 239 ++H A+ VT + + GI A+Y+L ++ +F K FG+ ++V+ + GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q AA+E + T+ + L G PD +++ Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDK------------------- 293 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVR--DQFNSMKKDLGYGLLL 357 ++ N + ++L L G+ +Q ++ DQF ++DL Sbjct: 294 -----------------KLDNKIAVPNILSFLTYGNWEQEIKGLDQF---EEDL------ 327 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 + N++ LY+A+ IMV G + + ++ +S + +IR ++ Sbjct: 328 --HPTNISG-------------------LYYAYHIMVGLGTVFIGLMVISLFQLIRGKLF 366 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV-ANSSLTAGDLIFSMV 476 + KW+L + ++ +P P+IA GW+ AE GRQPW + ++ TA A+ ++++G+ +F+++ Sbjct: 367 QTKWILWSLMFMMPFPYIANTTGWYTAELGRQPWLVYNLMRTAAGASPTVSSGNTLFTLL 426 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 147/504 (29%), Positives = 238/504 (47%), Gaps = 69/504 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA T YH L+ T+G+A+ + ++ +++ + +Y+ + +FW K+F + Sbjct: 1 MDQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV TG+ + +Q G NWS Y+ D G +E L AFFLE+ F+G+ +G +R+ Sbjct: 61 AFGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H +VA+G+ LSA WI+ AN WMQ P A + R F +V NP Sbjct: 121 GEKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFTTTADG-RFVATDFWGVVFNPSMP 179 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR--DFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + H + + ++TG + G++A+++ +GR D A+++F+I + + + +++GD Sbjct: 180 YRLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + G Q KLAAIEA W+T L PD++ E N + + Sbjct: 240 QHGLNTRKYQPMKLAAIEARWDTARR-VPINLIAWPDEKAERNDY--------------A 284 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 ++ P++G L++ H N K L Sbjct: 285 LEIPLLG--SLILTHS----------------------------LNGEVKGL-------- 306 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 ++ P V P++ AFR+MV CG LLL + + R R+ Sbjct: 307 -------------KEVPPSERPPVLPVFLAFRVMVGCGMLLLLVAFTGLYLRWRGRLYTT 353 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 +W A + +PL +IA AGW V E GRQP+ I TA A S + G + SM + Sbjct: 354 RWYQIACMGCVPLGFIATLAGWVVTEVGRQPYVIYGHFRTAEAVSPIATGAVASSMAIAF 413 Query: 480 GLYTLFLVAELFLMFKFARLGPSS 503 LY L+ + + A GP S Sbjct: 414 VLYNCLLLGFFWYAGRLAWRGPMS 437 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 150/481 (31%), Positives = 230/481 (47%), Gaps = 75/481 (15%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R+QFAL +H+LFVP++LG++ ++ +ME +Y+ + K IYK +T FW K+F + F +G Sbjct: 6 LARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTLTFVVG 65 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V TGL F FG NWS ++ Y G++FG L EG+ AFFLES F+G+ FG ++ K H Sbjct: 66 VVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKVSKKMH 125 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRM--EMVSFSELVLNPVAQVKF 184 +VALG+++SA WI+ AN WMQ P + + +M SF VL+P A +F Sbjct: 126 FFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPSALQRF 185 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H V +++G +L +SA Y+ K R FA + I+ + + D + Sbjct: 186 THVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSADVTARG 245 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q KLAA E ++TQ + L GI D ++E I IP L ++ R+ TPV Sbjct: 246 VAKHQPAKLAAFEGVFKTQGHTPIY-LLGIVDMKKE-RVIGIPIPSGLSLLVHRNAKTPV 303 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 GL DQ +D++ PNV Sbjct: 304 TGL-----------------------------DQFPKDEW-----------------PNV 317 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 A + + +M+ +LLA+IA + + + KK +L Sbjct: 318 AFVFQT-----------------YHLMVMLWGVMVLLALIAFAVYK--KKSWSCKKGILW 358 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSL-TAGD-----LIFSMVLI 478 + + P + E GW E GRQPW + +L T A S + AG ++FS++ I Sbjct: 359 ILSFSVLCPELCNEIGWISTEVGRQPWVVYGLLKTKDATSPIVNAGQIWQSLILFSIIFI 418 Query: 479 C 479 C Sbjct: 419 C 419 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 116/311 (37%), Positives = 178/311 (57%), Gaps = 4/311 (1%) Query: 1 MLDI--VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL 58 M DI ++L+R+QFA T +H +F +T+G+A L ++E +++ +G+++YKD+ +W K+ Sbjct: 1 MPDISALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKI 60 Query: 59 FGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW 118 FG+NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW Sbjct: 61 FGVNFGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGW 120 Query: 119 DRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNP 178 R+G H+ T +VALG+ +SA WIL +N WMQ P F + V + ++ NP Sbjct: 121 SRVGPGLHLFSTAMVALGTLISATWILASNSWMQTP--QGFEILDGVVVPVDWWAIIFNP 178 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + VH + ++ A+ + AW++LKG+ + ++A + V+G Sbjct: 179 SFPYRLVHMGIAAFLATALIVGAAGAWHILKGQKTEATRTMLSMAMWMLVVVAPLQAVVG 238 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D G Q KLAA+E WE LFG+PD E ET +FA+ IP+ +I T Sbjct: 239 DLHGLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTH 298 Query: 299 SVDTPVIGLKE 309 S D V LK+ Sbjct: 299 SWDGQVPALKD 309 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI---RNRIGEKKWL 422 D ++ + P + ++++FR+MV G L+ IAL WS+ R + + Sbjct: 301 DGQVPALKDFPPEDRPNASIIFWSFRVMVGLGMLM---IALGLWSLCLRYRGSLYSHQGF 357 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 LR L+ P IA+ AGWF E GRQPW + ++ TA A S+ L S+ L +Y Sbjct: 358 LRMTLWMGPAGVIAILAGWFTTEIGRQPWVVYGIMRTADAVSNHDISSLAASLALFIIVY 417 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 217 bits (553), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 192/339 (56%), Gaps = 24/339 (7%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVL---------SGKQIYKDMT 52 + I L+RLQFA+T +YH+LFVPL++ +A A+++T ++ + Y ++ Sbjct: 1 MSIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLS 60 Query: 53 KFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVG 112 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+EG++AFFLE+TF+G Sbjct: 61 LLTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLG 120 Query: 113 LFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFS 172 L++FG DRL + H+ W+VA+G+ +SA IL AN +MQNP+A + T R + SF Sbjct: 121 LWWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFR 180 Query: 173 ELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG------RDFAFAKRSFAIAASF 226 +L+LN V F HT A + G ++ + W++L+G DFA +F + F Sbjct: 181 DLLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFA----AFRALSRF 236 Query: 227 GMAAVLS----VIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETN 282 G A L+ V GD G + +VQ K+AA E +ET A F++F + Sbjct: 237 GAWATLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRP 295 Query: 283 KFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNG 321 FAI++P L +A S V+GLK+L + + G Sbjct: 296 TFAIEVPGMLSFLAKGSFSAEVLGLKDLQDAYAAQFGAG 334 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/321 (38%), Positives = 179/321 (55%), Gaps = 6/321 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + D V LSRLQFALT +H F L++G+ L I+E +++ +G Y +FW F Sbjct: 4 LTDPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFA 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ TG+ +EFQFGTNW +S +G+ FG L EG MAF LE+ F + FGW R Sbjct: 64 INFAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKR 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G H T +VA ++LSA WIL AN WMQ P + E + + + +P Sbjct: 124 VGPKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGG--HIENGVFIVDDYLAAIFSPDL 181 Query: 181 QVKFVHTVASGYVTGAMFILG-ISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 F+H + + ++F++G +S +++ G++ AF +SF IAA + ++GD Sbjct: 182 PFAFLH-MHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQP--APAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 ++G E+ +Q K+A IEA WET P A + L PD E E N F+I+IPY L ++ T Sbjct: 241 QNGLEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVT 300 Query: 298 RSVDTPVIGLKELMVQHEERI 318 S V GLKE + I Sbjct: 301 HSPTGTVPGLKEFPKEDRPPI 321 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 150/490 (30%), Positives = 230/490 (46%), Gaps = 78/490 (15%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + LSR+QFAL +H LF +T+ + ++L + + LS I+ +FW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG +R+ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H T +VA+G+ LSA WIL N WM P + F S+ +++ NP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTP--AGFEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRS--FAIAASFGMAAVLSV--IVLG 238 + H + + +T + + G+SA+ +LKG KR+ A+ + +A +L+ I +G Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGD----TKRAPKLALHTAIVLAGILAPLQIFVG 258 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D G + Q K++AIE W T+ A LF +P+++ + N +A+ IP +I T Sbjct: 259 DLHGLNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTH 317 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 + GL H V F S + + G+L+ Sbjct: 318 DAQGEIKGLDTFDGNHPP-----------------------VAPVFWSFRIMVATGMLM- 353 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 +A A A K PR LY L A++ L+F Sbjct: 354 -----LASAWLGCFYLARKKPFPR---LY------------LKAMVGLTFSG-------- 385 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 W+A AGW+V E GRQPW + +L T A ++L AG++ FS+ + Sbjct: 386 ---------------WVATLAGWYVTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVY 430 Query: 479 CGLYTLFLVA 488 Y + L+A Sbjct: 431 AVTYAVLLLA 440 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 105/246 (42%), Positives = 155/246 (63%), Gaps = 15/246 (6%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++L+RLQF +TA HFLFV LTLG+A ++A+M T +V +G + + MT+FWG+++ + Sbjct: 1 MDVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+ALG+ TGL MEFQFG +WS +HY GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 61 NYALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+V L + SA WI+VAN ++QNP + + R+ + L+ N Sbjct: 121 PRRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVTGD--RLALTDAGALLTNKALV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK--GRDFAFAKRSF-----------AIAASFGM 228 F H + +G TGA ++G SA+ + + G D RS IA +FG Sbjct: 179 FSFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVLAVHGVPIAVAFGF 238 Query: 229 AAVLSV 234 A +V Sbjct: 239 AQFATV 244 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 160/522 (30%), Positives = 238/522 (45%), Gaps = 104/522 (19%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + +L+RL F H L+ PLT+G+A L E ++ + + +T+F+ KLF INF Sbjct: 7 MTDLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINF 66 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW ++ K Sbjct: 67 GAGVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISK 126 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ T+ VA S LSA+WILVAN WMQ+P + + E + ++ + NP Sbjct: 127 KMHLFATFNVAFSSMLSAMWILVANSWMQSP--TGVHLEKGLFLVDDWTAAIFNPNFLTA 184 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSV---IVLGDE 240 F H + G F+ GISAW + K R R+ + AS MA V+ + +GDE Sbjct: 185 FPHMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRT--LTASL-MALVIVAPLQVYIGDE 241 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPA----AFTLFGIPDQEEETNKFAIQIPYALGIIA 296 G + + LAA+E W T A ++ L PD+E+ TN F I IP+ L Sbjct: 242 LGRTVAEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVL---- 297 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 SLLE + ST + + DQF Sbjct: 298 -----------------------------SLLEDHKWVSTVKGL-DQFKP---------- 317 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 +D P +AP Y AFRIMVA G +L+ + +FW++ Sbjct: 318 --------------------EDRPPVLAPFY-AFRIMVAAGGILMLV---AFWALYLRYK 353 Query: 417 GE--------KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTA--VANSSL 466 G+ + W LRA ++ LP++A+ GW+ E RQPW + ++ T+ V+ S+ Sbjct: 354 GKFNALELQRRPWFLRAVIFSAILPYVAIWTGWWTREIARQPWIVHGMMRTSEGVSQMSI 413 Query: 467 TA------GDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 +A G + F +V+ G + F K R GP Sbjct: 414 SAEIAWFIGFVFFDLVVWIGAWYFFS--------KVVRRGPD 447 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 160/254 (62%), Gaps = 6/254 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+RLQFALTA HFLFV LTLG+A L+A+M+T L+G ++ MT+FWG+L+ I Sbjct: 1 METLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+A+G+ TGL MEFQFG W+ +H+ G++ GA LA+E L+AFF+ESTF+GL+ FGWDRL Sbjct: 61 NYAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ V W+V L + SA WI+V+NG++QNP+ ++ +R+ + + Sbjct: 121 NRWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEVAGGVLRLTDAAAVLANPAAI-- 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F H + + F+ G+SA ++ KG + F +RS I + AV++ LG Sbjct: 179 TAFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALG-- 236 Query: 241 SGYEMGDVQKTKLA 254 G + Q K+A Sbjct: 237 -GAQFDTAQPMKIA 249 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 6/112 (5%) Query: 390 FRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQ 449 F +M+A +L A++AL +V R RI LL A IPLP+ A+ AGW E GRQ Sbjct: 292 FALMMAVAWLS-ALLALFPRAVHRLRIWHV--LLTAM---IPLPFAAMLAGWVFREVGRQ 345 Query: 450 PWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 PW + +L T A S L+ G + FS+ L+ L +V +L+ + AR GP Sbjct: 346 PWTVYGLLTTEDALSDLSPGAIRFSLAAFTLLFGLLVVVNTWLLARNARQGP 397 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 139/503 (27%), Positives = 228/503 (45%), Gaps = 75/503 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H +F T+G+A +A ET++ + I++ ++KFW ++F + Sbjct: 3 LDPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAV 62 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV +G+ M FQFGTNWS +S+ + G L+ E + AFFLE+ F+G+ FG D++ Sbjct: 63 VFGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKV 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ +VA G+ +S+ WIL AN MQ P + S+++ + P Sbjct: 123 PQGVHLFAAIMVATGTFISSFWILAANSLMQTP--QGLELINGMYYVTSWADSLFTPSFG 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F H + ++T ++ + G+SAW++L+ R+ K++ +IA F + V+GD Sbjct: 181 YRFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWFLLVLAPLQAVVGDFH 240 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q K+AA+E WET + LF IPD Sbjct: 241 GLNTLKHQPMKVAAMEGNWETS-SQVPLLLFAIPD------------------------- 274 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 KE H E G+ +Y L Sbjct: 275 ------KESQKNHFEVAIPGLASYVLTHDW------------------------------ 298 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI---RNRIGE 418 D + + + P V ++++FRIMV G L+ IA W ++ + RI Sbjct: 299 ----DGVVPGLNEVPIEEQPPVFIVFWSFRIMVGLGLLM---IAFGVWGLVLRRKGRIYH 351 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSMVL 477 L + P+IAV AGW V E GR PW I G++ SLT G +F+++ Sbjct: 352 NNIFLNGLRFMSLSPFIAVLAGWVVTETGRAPWLIYGQMTHAQGLTPSLTGGMALFTLIG 411 Query: 478 ICGLYTLFLVAELFLMFKFARLG 500 +Y+ A ++ + + + G Sbjct: 412 YIVVYSCVFSAGVYYLLQVFKGG 434 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/300 (40%), Positives = 171/300 (57%), Gaps = 26/300 (8%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMET----VYVLSGKQIYKDMTKFWGK 57 +DI++L+RLQFA+T H+LFV LTLG+ L+AIM+T + MT+FWG+ Sbjct: 1 MDILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 ++ IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FG Sbjct: 61 IYVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL H+ + WLV + SA W+LVANG+MQ P+ S + F L+ N Sbjct: 121 WDRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVVRDGVAYLT--DFGALLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIV 236 P A V H + +TG +F+ G+SA ++ +GR DF R+ + +AAV++ V Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGREDFRGPLRTGVL-----VAAVVTFPV 233 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 Y G +Q +AA TQPA A + P I + Y LGI+A Sbjct: 234 ------YAAGGLQYPIIAA------TQPAKTA--MMDEPGWVLWGQYVMIGLGYLLGILA 279 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/314 (33%), Positives = 175/314 (55%), Gaps = 5/314 (1%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R+QFA T +H +F ++G+A LA++ +++ + Q Y + +W K+F + F +G Sbjct: 48 LARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKKIFAVAFGMG 107 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V +G+ M +QFGTNWS +S G + G +A E L AFFLE+ F+G+ FG +R+G+ H Sbjct: 108 VVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFGRERVGEKLH 167 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 M T +VA G+ +SA WIL N WMQ P E + + ++V NP + VH Sbjct: 168 MFATAMVAFGTLMSATWILSVNSWMQTPAGFSIA-ENGQFIPEDWWQIVFNPSFPYRLVH 226 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSV--IVLGDESGYE 244 V + ++T ++ + + A ++L+ R A+R F++A MAA+++ I GD G Sbjct: 227 MVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMA--MWMAAIVTPLQIYAGDMHGLN 284 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q K+ A+E +E+ P A LFGI +Q E +A++IP +I S++ P+ Sbjct: 285 TLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILKHSLNAPL 344 Query: 305 IGLKELMVQHEERI 318 GL + E + Sbjct: 345 DGLDTIPDDEEPPV 358 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 345 NSMKKDLGYGLLLKRYT----PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLL 400 N ++ + Y L + + + + +A + D P VA ++++FR+MV GF + Sbjct: 316 NQAERQIDYALEIPKLSSLILKHSLNAPLDGLDTIPDDEEPPVAIVFYSFRVMVGLGFAM 375 Query: 401 LAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTA 460 L + S W+ R + WL RAA+ P +IAV AGW E GRQP+ + +L T+ Sbjct: 376 LGLGLWSLWARYRGTLFTTPWLHRAAILMGPTGFIAVLAGWITTEVGRQPYTVYGLLRTS 435 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 + + + A + S+V +Y A + + K P++ + G Sbjct: 436 DSLAPVAAPAVATSLVAFIIVYFFVFGAGTYYLLKMMNKRPATPRLG 482 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/266 (41%), Positives = 161/266 (60%), Gaps = 13/266 (4%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKD----MTKFWGK 57 +D +EL+RLQFA T H+LFV LTLG+ L+AI+ T V + ++ + KFWG+ Sbjct: 1 MDTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 L+ IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FG Sbjct: 61 LYVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL + WLV L + SA WILVANG+MQ+P+ + R + F+ + N Sbjct: 121 WDRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVG--YEVREGRAYLTDFAAQLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAK----RSFAIAASFGMAAVLS 233 P A V F H + + +TG +F+ G+SA+++L+ R+ IAA+ A+ Sbjct: 179 PNATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAA---ASTFP 235 Query: 234 VIVLGDESGYEMGDVQKTKLAAIEAE 259 V +LG + D Q KLA + E Sbjct: 236 VYMLGAAQFAVLADSQPMKLALLAGE 261 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 IM AC + LA + L F IR G WLL A IPLP++A GW E GRQPW Sbjct: 352 IMPAC--IALAAVVLGFGGRIRRWRG-LGWLLVVA---IPLPFVASVGGWLFREVGRQPW 405 Query: 452 AIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 + L + A S ++ G ++ S+V+ G+ V L+ +FAR GP++ + G Sbjct: 406 IVYGELKVSDAVSPVSFGHMLTSLVIFVGVLGALAVTNWTLIARFARRGPAASQLG 461 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 147/505 (29%), Positives = 229/505 (45%), Gaps = 66/505 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H LF +T+ + ++L + + + +M +FW K+F + Sbjct: 4 LDTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFAL 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 64 SFAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSE----LVLN 177 HM T LVA G+ +SA WI+V N WM P FE ++ V+F+ ++ N Sbjct: 124 PGWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQ----GFEM--IDGVAFATDWWAIIFN 177 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P +F H + +T A I G+SA+ L G + + + S G + I L Sbjct: 178 PSMPYRFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVRTALKVGVSIGALLIPVQIFL 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD G + Q K+AA+E WET LF IPD+ N I IP +I T Sbjct: 238 GDLHGLNTKEYQPAKVAAMEGLWETG-TNVPLILFAIPDEAARENHAEIGIPGLASLILT 296 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKA--YSLLEQLRSGSTDQAVR--DQFNSMKKDLGY 353 S D + GL + + + + + YS + +G A+ F K+ Sbjct: 297 HSWDGELQGLNDFVAEDGTVLHPPVAPIFYSFRVMVGTGMAMLALSWFGVFMMWKR---- 352 Query: 354 GLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 +R PN + +P++ L A++ ++F Sbjct: 353 ----RRMHPN-----PGACHWLAVEGLPKI---------------YLWALVPMAF----- 383 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIF 473 W +A AGW+ E GRQPW + V+ T +A + + A + Sbjct: 384 -----SGW-------------VATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAG 425 Query: 474 SMVLICGLYTLFLVAELFLMFKFAR 498 ++V +Y L L A + ++ AR Sbjct: 426 TLVGYLVVYGLLLFAYISVIVYLAR 450 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 145/493 (29%), Positives = 224/493 (45%), Gaps = 73/493 (14%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR+QF T H LF L++G+A + + +G + Y + FW K+F + F +G Sbjct: 31 SRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAVGFVMGT 90 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 TG+ M FQFGTN+ +S G++ G PLA E MAFFLE+ F+G+ FG +++ + Sbjct: 91 VTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKVSDRTYF 150 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV---LNPVAQVKF 184 + L G+ LS WILV N WMQ P + ME+ ++ + P + Sbjct: 151 LSSVLTGFGAWLSGFWILVVNAWMQTPQGYEM-ITRNGMEVAKLTDPIAAFFTPRMTWMY 209 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 VH + + ++ A+ + G++A+ + K RD + IA + A V GD G Sbjct: 210 VHMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLLLIVAAPLQAVHGDAYGRH 269 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + D Q K AA+EA +ET A LF IP T+ AI P + A + P Sbjct: 270 VEDTQPQKFAAMEAHYET--GTADLHLFAIP-----TSPDAIMNPSEENLFA---ISLPR 319 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 +G L SG F+++ K L Y N Sbjct: 320 VG----------------------SFLASGG-------DFDAVVKGL------DEYEQN- 343 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS---VIRNRIGEKKW 421 P V ++++FRIMV GFL I L+FW + R+R+ + Sbjct: 344 ----------------PPVPLVFWSFRIMVGLGFLF---IGLAFWGGYLIYRDRLSDSSL 384 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSMVLICG 480 LRA + PL + A+ GW+V E GRQPW + GE+ +S+L++ + S+ Sbjct: 385 YLRAMIAASPLGYAALLTGWYVTEIGRQPWVVQGELKTGEAVSSTLSSTEATLSLAAFVV 444 Query: 481 LYTLFLVAELFLM 493 +Y +VA L+ + Sbjct: 445 IYIGLVVAALYTL 457 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 223/495 (45%), Gaps = 69/495 (13%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 LSR+Q A T +H +F T+G+A LA++E + + +G ++Y+ + +FW K+FG+ F +G Sbjct: 8 LSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAFGMG 67 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V +G+ M FQFGTNWS S G I G L E AF LE+TF G+ G R+ + Sbjct: 68 VVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRPWFY 127 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + LVA G+ +SA WILV N WMQ+P+ + + ++ ++ N V V+F H Sbjct: 128 LTSCILVAAGTTMSAFWILVNNSWMQHPVG--YVVQNGIFVPTDWAAIIFNHVVWVRFPH 185 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 + Y+T A + + A Y+LK R A ++ + A V I+ G +G + Sbjct: 186 MLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGDYLH 245 Query: 247 DVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIG 306 D Q K AA+E W E+ + IP A Sbjct: 246 DDQPAKFAAVEGRW---------------TDEQPAAEVIFAIPDA--------------- 275 Query: 307 LKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVAD 366 ER R K L + SG+ D +++G Sbjct: 276 -------AHERNRFEWKVPVLGSLIASGTAD----------SREVGL------------- 305 Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAA 426 A D P + P +FAFR+M CG ++LA+ + R R+ ++WLL Sbjct: 306 -----TDFAAADRPPVLIP-FFAFRVMAGCGLIMLALAWAGTVAARRGRLERRRWLLWPL 359 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICGLYTLF 485 PL +IA+ AGWF AE GRQPW + VL TA A LTA ++ L +Y Sbjct: 360 ACSFPLGFIAILAGWFTAEVGRQPWTVWGVLRTADALTPGLTAHFAAATLALFVAIYAFI 419 Query: 486 LVAELFLMFKFARLG 500 ++ + + R G Sbjct: 420 FCFGVYYIVRIVRRG 434 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 132/489 (26%), Positives = 227/489 (46%), Gaps = 72/489 (14%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +R Q A++ +H +F + + M F + I +Y+ +G +IYK +TK W + I FA G Sbjct: 20 ARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAILFATGA 79 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 +G + F+ G W + + G IFG P ++EG AFF+E+ +G F +GW+R + H Sbjct: 80 VSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWNRFNRWFHW 138 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 +V + S + ++ AN WM +P + F++ + + + + N + +H Sbjct: 139 ATGLVVGISGIASGILVVAANAWMNSP--AGFDYVDGKYINIDPIQAMFNDAWFSQALHM 196 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + + +V + G+ A ++K ++ +F +F I+A A L + GD S ++G Sbjct: 197 MLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDISAKDVGK 256 Query: 248 VQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGL 307 Q KLAA+EA +ET+ A A+F + GIPD+E T K+ Sbjct: 257 RQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKY----------------------- 292 Query: 308 KELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADA 367 G+K LL L G D+ V Sbjct: 293 -------------GIKVPGLLSFLAYGDIDKPVTG------------------------- 314 Query: 368 TEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK-WLLRAA 426 + +D P VA ++AF+IM+ G LL+ + L F ++ + + K WL R Sbjct: 315 ----LHDIPRDEWPPVAITHYAFQIMIGLGMLLVLLSILYFIALFKKKSWLKSTWLFRLF 370 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 + IPL +IA+EAGW V E GRQPW I ++ T A + + + +S + ++ Sbjct: 371 VIAIPLGYIALEAGWVVTEVGRQPWIIYGIMRTIDAVTPMPG--IAYSFYVFTAVFVSLS 428 Query: 487 VAELFLMFK 495 VA ++L+++ Sbjct: 429 VAVIYLLYR 437 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 119/308 (38%), Positives = 167/308 (54%), Gaps = 3/308 (0%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA H L LT+G+A +A +E + +G+ +Y+ ++ FW ++F + Sbjct: 4 IDALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG R+ Sbjct: 64 SFGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H LVALG+ LS+ WIL N WMQ P S + F R S ++L+P Sbjct: 124 PQWAHALAAALVALGTLLSSFWILAVNSWMQTP--SGYRFVDGRFYPESIVAVLLSPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + HTV + VT A +LG A Y+L R A ++ +A F AV I LGD Sbjct: 182 YRLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKMALGFLAIAVPVQIALGDAH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q KLAA+E W+T A TLF IPD ETN+F + IP + T + Sbjct: 242 GLNTLAHQPVKLAAMEGLWDTGRGVRA-TLFAIPDGARETNRFELAIPTLGSLYLTHDPN 300 Query: 302 TPVIGLKE 309 V GLK+ Sbjct: 301 GLVRGLKD 308 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 9/104 (8%) Query: 377 KDSIPRVAPLYFAFRIMVACGFLLLAII--ALSFWSVIRNRIGEKKWL--LRAALYGIPL 432 +D P VA ++FAFR+MV G ++LAI+ L+ W R + + WL RAA P+ Sbjct: 311 RDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTLWRGGRLYV-RRGWLATCRAA---TPI 366 Query: 433 PWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSM 475 ++AV AGW E GRQPW + ++ TA + SLT D+ S+ Sbjct: 367 GFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTTTDVALSL 410 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 137/488 (28%), Positives = 230/488 (47%), Gaps = 75/488 (15%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +RLQ A + +H +F + + M F +++ ++ + K +Y+D+TK W K I FA G Sbjct: 7 ARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAIFFATGA 66 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 +G + F+ G W + + G IFG P ++EG AFF+E+ +G + +GW++L H Sbjct: 67 VSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEG-TAFFIEAIALGFYLYGWNKLNPWFHW 125 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDF-NFETMRMEMVSFSELVLNPVAQVKFVH 186 +V + LS + ++ AN WM +P D+ N + + ++ + + + N + +H Sbjct: 126 ATGVVVGVSGLLSGILVVAANAWMNSPAGFDYINGQYLNIDPI---KAMFNEAWFSQSLH 182 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 + +V+ + G+ A +LKG++ AF ++F IAA FG A + GD S ++ Sbjct: 183 MCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDISAKDVA 242 Query: 247 DVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIG 306 Q KLAA+EA + T+ A + GIPD + ++ YAL Sbjct: 243 KRQPEKLAAMEAHFHTEKF-APLIIGGIPDTANK------KVDYAL-------------- 281 Query: 307 LKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVAD 366 K LL + +G FN K L D Sbjct: 282 ----------------KIPGLLSFMATG--------DFNGEVKGL--------------D 303 Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG-EKKWLLRA 425 A + Q P VA ++AF++MV G ++ I L F ++ + + + KWLL+ Sbjct: 304 AVPKEDQ-------PPVAVTHYAFQVMVGLGMAMVGIAILYFIALWKKKQWLDSKWLLKL 356 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY-TL 484 + PL +IA+EAGW V E GRQPW I V+ TA A + + +++S L +Y +L Sbjct: 357 FVAATPLGFIALEAGWTVTEVGRQPWIIRGVMRTADAVTPMPG--IVYSFYLFTAVYISL 414 Query: 485 FLVAELFL 492 ++ L L Sbjct: 415 AIIVSLLL 422 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 93/207 (44%), Positives = 130/207 (62%), Gaps = 4/207 (1%) Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRS-GSTDQA---VRDQFNSM 347 +G+I TRS+ + + G+ +L+ + E+ IRNG++AY LE +R+ G T Q + F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 LGY LLLKRY + AT+AQI QA D++P V PL++AFRIMV G +A+ A Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 FW +R R+ W+L+ A+ IPLPWIA E GW VAE GRQPW I VLPTA+A S+L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMF 494 AG L+ ++ +Y++ V E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLMI 207 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 144/481 (29%), Positives = 215/481 (44%), Gaps = 74/481 (15%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L R QFA T H + T+G+A L ++E +++ + +++Y D+ +W KLF + A G Sbjct: 10 LVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTTAAG 69 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG ++G H Sbjct: 70 VVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGHRVH 129 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPI----ASDFNFETMRMEMVSFSELVLNPVAQV 182 T +VALGS +SA WIL AN W+ P A+D NF V + ++ NP Sbjct: 130 FFATCMVALGSLVSAFWILSANSWLHTPAGFARAADGNFLP-----VDWLRIIFNPSFPW 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAA-SFGMAAVLSVIVLGDES 241 + +H + + A I + AW++L+ A+ F++ + A L ++ GD Sbjct: 185 RMLHMSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMGLWVIAIVAPLQLLA-GDLH 243 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q KLAAIE W Q PA + E FAI Sbjct: 244 GRNTLEHQPQKLAAIEGSW--QRPPAG--------EGEPLRLFAI--------------- 278 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 QA R++ LG L +T Sbjct: 279 ---------------------------------PDMQAQRNRHELAIPRLGSLYLRHNWT 305 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 T A +++ + +P V ++FAFR MV G LL+A+ LS R R+ E +W Sbjct: 306 -----GTIAGLREFPRSDLPPVPIVFFAFRAMVGLGLLLIAVGMLSLVLRARGRLYEARW 360 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L R + P +A+ GW V E GRQP+ + +L TA + S L+ + S V I L Sbjct: 361 LQRVVVVMAPSGMLAMLCGWVVTEVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVL 420 Query: 482 Y 482 Y Sbjct: 421 Y 421 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 157/521 (30%), Positives = 244/521 (46%), Gaps = 79/521 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLS--GKQIYKDMTKFWGKLF 59 L + LSR+QFA+TA+ HFLFV T+GM I E +Y + Y +T F+ ++F Sbjct: 10 LAVTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIF 69 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +F GV TGL MEFQFG NWS ++ +GD+ G PLAIE +++FF+EST +GL+ F W Sbjct: 70 FFSFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWG 129 Query: 120 RLGKVQHMCVTWLVA--LGSNL-SALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL 176 +L K H WL LG++L S +WI+ N +MQNP F E R + S L+ Sbjct: 130 KLPKRAH---AWLGVGMLGASLFSIVWIIAINAFMQNPYG--FRLEGGRARLTSLITLLQ 184 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 NP + +F+H + + +TG GI+AW +L RD +F IA G+ L Sbjct: 185 NPQYRPEFLHVLFAILITGGFLTAGIAAWQILHKRD----TSAFKIAVQIGLLIALPAAF 240 Query: 237 L----GDESGYEMGDVQKTKLAAIEAEWETQPAP---AAFTLFGIPDQEEETNKFAIQIP 289 L GD+ G +Q K AIE +ET+ +P A + + + +++ T K A+ IP Sbjct: 241 LQPAQGDDQGAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIP 299 Query: 290 YALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK 349 M Y +T N++ K Sbjct: 300 -------------------------------NMGTYF------GKNTFTGTMPGMNAVAK 322 Query: 350 DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG--FLLLAIIALS 407 + ++ VA + + Q+ P V L++ +MV G F + A+ A Sbjct: 323 -----MYHAKFDKTVAKSYDGQMTY-----YPPVTLLFWTMHLMVYAGYFFTMFALFATI 372 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SL 466 ++ I + LR + + LP++ +GW VAE GR P+ + +L A S S+ Sbjct: 373 MLHRRQSAIEDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSV 432 Query: 467 TAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 T + S+ LFL+A++FL+ + ++K G Sbjct: 433 TVTEAGTSLA-------LFLMADIFLVTTMIYISHRTVKRG 466 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 139/496 (28%), Positives = 223/496 (44%), Gaps = 80/496 (16%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V LSRL FA H L+ P+T+GM++LL +E ++ +G + + + +F+ K+F INF Sbjct: 9 VLLSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINFG 68 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 GVATG+TME FG + +S VG FG L E + AF E+ F+GL FGW ++ K Sbjct: 69 AGVATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSKG 128 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H T+ V L S LSA+WILVAN WMQ+P + + ++ ++ +LN F Sbjct: 129 MHAFATFNVGLSSTLSAMWILVANSWMQSP--NGVVLKNGLFQVTNWWNAILNENFTWGF 186 Query: 185 VHTVASGYVTGAMFILG-ISAWYMLKGRDFA-FAKRSFAIAASFGMAAVLSVIVLGDESG 242 H + V A+F+ +S+W++LK R+ F K + + A + + + GD G Sbjct: 187 PHMWVA-TVELALFVFAAVSSWFILKNRNADLFTKLLKPTLLALLIVAPIQIFI-GDTLG 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ Q T LAA+E + T +P+ + T I P A ++ Sbjct: 245 RDVAMTQPTSLAAMEGHYHTY----------LPNGKVNTGWHLIAFPNA-----KNDGNS 289 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 I + ++ E NG +G +D+ Sbjct: 290 FAITIPHVLSLLETHTWNGKV---------TGMDSFPAKDR------------------- 321 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG----- 417 P V ++AFR MVA GF L + W +R + Sbjct: 322 ------------------PDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALR 363 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT--------AG 469 + W LR+ ++ LP++A+ GW+ E GRQPW + ++ T S ++ AG Sbjct: 364 KHPWFLRSVVFSGFLPYLAIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIFWFAG 423 Query: 470 DLIFSMVLICGLYTLF 485 ++F +V+ G + F Sbjct: 424 YIVFELVVWSGAWYFF 439 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 11/289 (3%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 L+R QFA T +H + LT+G+A L ++E +++ +QIY D+ K+W K+F +N A+G Sbjct: 21 LARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNVAVG 80 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V TG+ MEFQFG NW S G + G + +E L+AFFLE+ F+G+ FG ++ H Sbjct: 81 VVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRPWVH 140 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNP----IASDFNFETMRMEMVSFSELVLNPVAQV 182 T +VA GS SA WIL AN WMQ P I D F+ V + ++ NP Sbjct: 141 FLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGPDGRFQP-----VDWWAVIFNPSFPY 195 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + +H + + A + + AW++LK A+R F+ +A V+GD G Sbjct: 196 RLMHMSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHG 255 Query: 243 YEMGDVQKTKLAAIEAEWE--TQPAPAAFTLFGIPDQEEETNKFAIQIP 289 D Q KLAA+E W LF IPD E N + IP Sbjct: 256 ENTRDHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIP 304 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 63/137 (45%) Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAA 426 T + Q D +P V ++FAFR MV GFL++ +R R+ E +WL R Sbjct: 317 GTIHSLNQFPPDELPWVPGVFFAFRAMVGLGFLMIFFGVAGLVVRLRGRLWEARWLQRGM 376 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 + P IA+ AGW V E GRQPW I L T + S + ++ S V I +Y L Sbjct: 377 VAMAPAGVIAMLAGWVVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVVYLLVF 436 Query: 487 VAELFLMFKFARLGPSS 503 + M + P + Sbjct: 437 ALGMGFMLRLLAKPPGN 453 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 155/273 (56%), Gaps = 11/273 (4%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD V SR+QFALT + H +F +++G+A L + S +Y+ + +FW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+EG+MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMR--MEMVSFSELVLNP 178 + + + V LG+ LSA+WIL+AN WMQ P + E + + +V LNP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-------DFAFAKRSFAIA-ASFGMAA 230 FVH + + A+ + GI+A+Y+ + + F +++ IA + + A Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 231 VLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQ 263 L I GD + + Q K AA+EA WET Sbjct: 241 PLQAI-HGDLYARHIVETQPQKFAAMEAIWETD 272 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 7/127 (5%) Query: 381 PRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR---NRIGEKKWLLRAALYGIPLPWIAV 437 P VA ++++FRIMVA GF I L+FW V R + E L +A + PL +AV Sbjct: 330 PPVAIVFWSFRIMVALGFWF---ILLAFWGVYRWWRGELYEDDLLHKALMLSAPLGLVAV 386 Query: 438 EAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICGLYTLFLVAELFLMFKF 496 E GW V E GRQPW I V+ T+ + S LT + ++V +Y L +++ + Sbjct: 387 ELGWIVTEVGRQPWVIQGVMKTSDSVSPGLTGAEATATLVGFAIVYLCLLTLYTYVIVRI 446 Query: 497 ARLGPSS 503 R GP Sbjct: 447 IRAGPPD 453 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 121/461 (26%), Positives = 207/461 (44%), Gaps = 70/461 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R Q A + +H +F + +GM L+ I E +++ + ++ Y + + W K + Sbjct: 1 MDELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G I G A+EG AFF+E+ F+GL+ +GWD+L Sbjct: 61 LFAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + VAL S + +L AN WMQ+P + F + + + + NP Sbjct: 120 PPKIHWLCGFPVALSGLASGVLVLSANAWMQSP--TGFELVGGQPTNIDPVKALFNPAWG 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 V +H+ S Y+ A + + A+ +L+G+ + +R+ IA + + L + + GD S Sbjct: 178 VMALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDAS 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q KLAA+E + ++ A ++ G PD E E ++A++IP L +A + Sbjct: 238 ARSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL D RDQ+ Sbjct: 297 ALVRGL-----------------------------DSVPRDQW----------------- 310 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 P V + AF++MV G + L ++++ +W+ R KW Sbjct: 311 -------------------PNVVVVRAAFQVMVGLG-IFLVVVSVWYWASRFWRRLHTKW 350 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA 462 L A + + A+EAGW V E GRQPW I ++ T+ A Sbjct: 351 LYIALVLSGIAGYTALEAGWIVTEVGRQPWIIYGIMRTSEA 391 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/228 (40%), Positives = 143/228 (62%), Gaps = 5/228 (2%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYK----DMTKFWGKLFG 60 V+++RLQFA+T H++FV +TLG+ +L ++T L+ + + MT++WG ++ Sbjct: 4 VDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGLIYV 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 IN+++G+A+G+ MEFQFGTNWS SH VGD+FGAPLA+E L+AF ESTF+ L+ FGW + Sbjct: 64 INYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFGWGK 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 L H + WLVA + SA W+LVANG+MQNP + + R + S + L NP Sbjct: 124 LPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNNPST 182 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGM 228 FVH + + G + ++ +SA ++ + ++ F RSF + G+ Sbjct: 183 IWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGL 230 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 2/210 (0%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + +RLQFALT+ H++FV TLGMA L+ + + +L + +FWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + +GV +GL ME Q NWS + G +F APLA+E + AFF ESTF+GL+ FGWDR+ Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + H+ +V L + LSA W+LVANG+++NP+ F + LV NP A + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRD 212 F H S + G + + G+SA+++ +G D Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGND 211 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR-NRIGEKKW 421 ++ A A+I+ A +S +A + + F L+ +AL W V R +R W Sbjct: 254 TLSSAEIAEIEAARPESTMVLAEVGNGVMTLCWTVFFLVLPVALLAWLVRRLDRWRWLHW 313 Query: 422 LLRAALYGIP-LPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 LL +P L +A AGW E GRQPWA+ + TA A + L+ + S V+ G Sbjct: 314 LLSV----MPVLALLAGVAGWLYRELGRQPWAVWHHMTTAEAITPLSVPHAVASFVVFTG 369 Query: 481 LYTLFLVAELFLMFKFARLGP 501 + + +L+ ++AR GP Sbjct: 370 AFAVLAGITWWLLVRYARRGP 390 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 3/301 (0%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +RLQ A T +H +F + +G+ L+ + E + + +G +++ + K W K F + FA+G Sbjct: 25 ARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFAVGA 84 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 +G + F+ G W + G + G P +EG AFF E FVG++ +GW+RL H Sbjct: 85 VSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEGF-AFFTEGIFVGIYLYGWNRLAPFHHW 143 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 +AL +SA +++ N +M P + + +++ ++ + LNP + H Sbjct: 144 LCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDADGKLLDVQPWTAM-LNPATGAQTTHM 202 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + + Y+ + AW +L+GR+ + +R+ + G L +G +G+ + Sbjct: 203 IVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHVVAV 262 Query: 248 VQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGL 307 Q KLAA+E +WET+ A + GIPD E +T +AI+IP L ++A + V GL Sbjct: 263 TQPIKLAAMEGQWETETY-APLRIGGIPDPETKTTPYAIEIPGMLSVLAYDNPAAEVQGL 321 Query: 308 K 308 Sbjct: 322 N 322 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 11/120 (9%) Query: 366 DATEAQIQQAT---KDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG----- 417 D A++Q +D P ++ AF+IMV G LL+ I WS + G Sbjct: 312 DNPAAEVQGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFI---GLWSGYLLKWGKSAWH 368 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 E++W L L PL +A+EAGW V E GRQPW + L T A + IF++ + Sbjct: 369 ERRWWLLTLLASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVTQAPGVWFIFAVTM 428 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + L+RLQFALTA H++FV LTLG+A L + V L G + +FWG L+ +N Sbjct: 4 DPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYLVN 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGWDR+G Sbjct: 64 YGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDRMG 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + H+ +V + SA W+LV+NG+++NP+ F + L+ NP A + Sbjct: 124 RWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAAVL 181 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRD 212 F H V + GA+ + SA+++++ D Sbjct: 182 AFGHIVTGSLLVGALVVAATSAYHLVRRDD 211 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 163/321 (50%), Gaps = 24/321 (7%) Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 HTV ++T +F +G+ A+Y++K R AK F AA+F + A ++ +++GD GYE+ Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVI 305 Q KLA +E ++ET+ A+ LFGI DQE + ++ ++IP L ++ + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKELMVQHEERIRNGMKAYSLLEQ-LRSGST---DQAVRDQFNSMKKDLGYGLLLKRYT 361 G+ EL+ ++ + + +LEQ L+ T Q ++DQ K +K + Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQAQTPEEKQKIKDQLAEAK--------VKAHA 171 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 N+ + +P + ++ F +MV GF + I L++W + + + K Sbjct: 172 FNIK-----------YEDLPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKG 220 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L + IPLP++A GW AE GRQPW + +L T S + A + S+ + + Sbjct: 221 FLWLLVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTI 280 Query: 482 YTLFLVAELFLMFKFARLGPS 502 YT+F + L+L+FK GP+ Sbjct: 281 YTIFFIVFLYLIFKTIGKGPN 301 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/76 (90%), Positives = 73/76 (96%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQ 76 MYHFLFVPLTLG++FLLAIM T YVL+GKQIYKDMTKFWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSYYSHYVGDIF 92 FGTNWSYYSHYVGDIF Sbjct: 61 FGTNWSYYSHYVGDIF 76 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 154/313 (49%), Gaps = 15/313 (4%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR+QF T H +F L++G+A + V + +Q Y + FW K+F + F +G Sbjct: 24 SRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFAVGFVMGT 83 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 TG+ M FQFGTN+ ++ G++ G PLA E MAFFLE+ F+G+ +G +R+ ++ Sbjct: 84 VTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRERVADRTYV 143 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV---LNPVAQVKF 184 + LV +G+ LS WILV N WMQ P + ME+ ++ V L P + Sbjct: 144 LSSVLVGVGAWLSGFWILVVNAWMQTPRGYEMVTRN-GMEVAKLTDPVAAFLTPRMPWMY 202 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 VH + + ++ A+ + G+SA+ + K D + +A + + V GD G Sbjct: 203 VHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHGDAYGRH 262 Query: 245 MGDVQKTKLAAIEAEWETQPA-------PAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 + D Q K AA+EA +ET A P + P E N F + +P +A+ Sbjct: 263 VEDTQPQKFAAMEAHYETGSADLHLLAFPKSLDALTDPRTE---NLFTVSLPGIGSFLAS 319 Query: 298 -RSVDTPVIGLKE 309 D VIGL E Sbjct: 320 GGDFDAEVIGLNE 332 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 381 PRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAG 440 P VA ++++FR MV GFL + + + R R+ E L++ + P + A+ G Sbjct: 337 PPVALVFWSFRFMVGLGFLFIGLALWGGYLTYRGRLTESTRYLKSMIAASPFGYAALLTG 396 Query: 441 WFVAEYGRQPWAI-GEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFAR- 498 W+V E GRQPW I GE+ + +S+LT + ++V LY ++ L+++ R Sbjct: 397 WYVTEIGRQPWVIQGELKTSEAVSSTLTGTEATLTLVGFVVLYIALILTALYVLKWLIRG 456 Query: 499 ----LGPSSLKTGRYH 510 LG GR+ Sbjct: 457 ELRSLGVQESSAGRWR 472 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 12/318 (3%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V SR+ LT +H ++ + +G+ ++AI + V + Y + + W + F I Sbjct: 5 DPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVIT 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 A+GV TG + Q W ++ G + PL +E AFF E+ F+G++ + WDR Sbjct: 65 VAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFMETF-AFFFEAIFLGIYLYTWDRFE 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSEL--VLNPV 179 + +H+ + VA+GS+ SA++I + N +M P F E+V+ + + NP Sbjct: 124 NQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQ----GFALKNGEIVNIDPIAAMFNPA 179 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 K H +A+ Y+T A + I+AW++LKG + +++ + + ++ ++GD Sbjct: 180 MPTKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 SG + Q KLAA E +ET + A FG+ +++ E K+A++IPYAL ++A Sbjct: 240 LSGKFLAVYQPEKLAAAEWHFETS-SHAPLVFFGMLEEDGEV-KYALKIPYALSVLAHNH 297 Query: 300 VDTPVIGLKELMVQHEER 317 V GL + + +ER Sbjct: 298 PGAIVTGLND--IPKDER 313 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 10/143 (6%) Query: 363 NVADATEAQIQQATKDSIPRVAPLY--FAFRIMVACGFLLLAIIALSFW--SVIRNRIGE 418 N A + KD P PLY + F +MVA G L+ ++A ++W SV R + Sbjct: 296 NHPGAIVTGLNDIPKDERP---PLYIHYLFDMMVAIGVFLM-LVATAYWLGSVFRWKWTT 351 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 KKW G PL IA+EAGW++AE GRQPW + + TA A +S D++ +VL Sbjct: 352 KKWFFGLLAAGGPLSMIAIEAGWYLAEVGRQPWILRGYMKTAEAATSSAHVDMM--LVLF 409 Query: 479 CGLYTLFLVAELFLMFKFARLGP 501 C LY + +A + ++ + R P Sbjct: 410 CLLYLVLGIASVIVLVRLFRRNP 432 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Query: 99 EGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASD 158 E L AFF+E+ +G+ FGW R+ K H + + G LSA WIL AN WMQ P Sbjct: 5 EVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTP--DG 62 Query: 159 FNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR 218 N+ + E+ S+ ++ NP +++H + + Y++ M ILG+SA+Y++K + +FAK Sbjct: 63 VNYVNSKFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSFAKT 122 Query: 219 SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQE 278 + + +S +++GD+ G E+ + Q K AAIE W+TQ A LF P + Sbjct: 123 CIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYPSEA 181 Query: 279 EETNKFAIQIPYALGIIATRSVDTPVIGLKEL 310 +E N FAI+IP +I T +D +IGLK + Sbjct: 182 QEKNLFAIEIPKLASLINTHELDGELIGLKSV 213 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%) Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 D ++ + P VA ++++FRIMV G L++ I + + R +I KW L+ Sbjct: 204 DGELIGLKSVPEKDRPVVAVVFYSFRIMVGIGTLMILIGLVGTLLLARKKIESSKWFLKL 263 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLF 485 PL ++A GWF AE+GRQPW + +L T + S L+ + S+ I +Y F Sbjct: 264 CTLTTPLGFVATITGWFTAEFGRQPWVVYNILRTEYSVSDLSFWQVFSSLASIIIVY--F 321 Query: 486 LVAELF---LMFKFARLGPSSLKTGR--YHFEQS 514 ++ F +F+ GPS+ R Y + QS Sbjct: 322 IIFGYFYFKYLFRIINGGPSTDGEERMPYSYFQS 355 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 151/305 (49%), Gaps = 10/305 (3%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 A + +H +F L +GM LLA + +++ + + Y+ + K W + + FA+G +G Sbjct: 2 AYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGTG 61 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWL 132 + F+ G W + H+ G G +EG AFF E+ F+GL+ +G +R+ V H Sbjct: 62 IAFELGLLWPEFMHFAGSTVGPAFTLEG-YAFFTEAIFIGLYLYGRERMRPVAHWLTAVA 120 Query: 133 VALGSNLSALWILVANGWMQNPIASDF---NFETMRMEMVSFSELVLNPVAQVKFVHTVA 189 VA+ S+ + AN W QNP+ D N E M V +NP V VH+ Sbjct: 121 VAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTV-----FVNPHWPVMAVHSTI 175 Query: 190 SGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQ 249 + Y + G+ AW ML+GR +++ IA + G+ A +++ + GD S + Q Sbjct: 176 ACYAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQ 235 Query: 250 KTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKE 309 KLAA+EA + TQ A A + G+P+ EE T A+ +P L +A +D V GL Sbjct: 236 PEKLAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDR 294 Query: 310 LMVQH 314 + Q Sbjct: 295 VPRQE 299 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 28/199 (14%) Query: 279 EETNKFAIQIPYALGIIATRSVDTPVIG--LKELMVQHEERIRNGMKAYSL--------- 327 + + A++I A+G+IA +V P+ G +++ +H+ M+A + Sbjct: 199 DPLRQKALRIALAMGLIA--AVTMPLTGDLSAKVVARHQPEKLAAMEALFVTQARAPLLI 256 Query: 328 --LEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAP 385 L G+ AV + L YG L DA A + + + P V Sbjct: 257 GGLPNPEEGTVCCAV--AVPGLLSFLAYGRL---------DAEVAGLDRVPRQEWPNVPL 305 Query: 386 LYFAFRIMVACGFLLLAIIALSFWSVIRN--RIGEKKWLLRAALYGIPLPWIAVEAGWFV 443 ++ +F++MV G ++ + W R ++ + LL + PL ++A+EAGW V Sbjct: 306 VHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGWIV 365 Query: 444 AEYGRQPWAIGEVLPTAVA 462 +E GRQPW I +V+ TA A Sbjct: 366 SETGRQPWTIWKVMLTADA 384 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 97/144 (67%) Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 S YE+ +Q KLAA+E EW+T+PAPA F L P QE+E N FA++IP LGI+AT S+ Sbjct: 2 SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL 61 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 DTPV GLK LM R++ G +A+ L++++ G+ V + F++++ DLGYG+LL +Y Sbjct: 62 DTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY 121 Query: 361 TPNVADATEAQIQQATKDSIPRVA 384 P++ T Q + A + +IP+VA Sbjct: 122 APDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 122/487 (25%), Positives = 214/487 (43%), Gaps = 86/487 (17%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R ++ +H ++ + +G+ LL + E + + +G + + ++ + W + + Sbjct: 1 MDDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G + G ++EG AFF E+ F+ L+ +G RL Sbjct: 61 LFAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEGF-AFFTEAIFLALYSYGEQRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNP--------IASDFNFETMRMEMVSFSE 173 + T + + S +SA++++ ANGWM P +ASD + +V+F+ Sbjct: 120 SRRAQFFCTVPMVVASAISAVFVISANGWMNTPSGFRMVNGVASDIH------PLVAFA- 172 Query: 174 LVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLS 233 N + VH + YV + G A +L+GR K++ ++ + G A+ Sbjct: 173 ---NQAWPHQAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPL 229 Query: 234 VIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALG 293 +++ GD + + + QK KLAA EA ++T A A + G PD E T ++AI+IP L Sbjct: 230 MLMSGDWAAEALAEHQKAKLAAAEAHFKTMAA-APLVIGGWPDPETGTVRYAIKIPKLLS 288 Query: 294 IIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGY 353 +A ++ V G+ A+ L GST Sbjct: 289 YLANGDANSVV---------------QGLDAFPL------GSTPD--------------- 312 Query: 354 GLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 PR+ +F +MV F++ A A +W R Sbjct: 313 ---------------------------PRIVHPFF--DLMVGSSFVMAAAAAWFWWLRWR 343 Query: 414 NR-IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLI 472 + + K+ L L P IA+E+GW V E+GRQPW I L T+ A + LI Sbjct: 344 EKEVTLKRGALILVLIAAPFGMIALESGWMVTEFGRQPWIIQGYLRTSEAVTPNGGLLLI 403 Query: 473 FSMVLIC 479 F+ L+ Sbjct: 404 FATFLMV 410 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 121/481 (25%), Positives = 195/481 (40%), Gaps = 81/481 (16%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V+L+R Q A + +H F +G+ +LL E ++ +G ++ +TK W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+G +G + F+FG W + G G +EG AFF E+ FVG++ +GW RL Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEGF-AFFTEAIFVGMYLYGWKRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H W +A+ LS L+I+ N WM P + +E ++ + +P Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRGIVEQNGKL-LEAKPYAPFI-SPGTPP 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + VH + + + + I A ML+GR + +R I + +A +++GD + Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIGLAVVLACAPLQLIVGDWAA 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 G Q KLAA+E + T P+ALG I Sbjct: 245 RVAGANQPFKLAAMEGLYHT----------------------GSHAPFALGGIYDNKTG- 281 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 IR G++ L L ST ++ Sbjct: 282 --------------EIRYGLEIPGGLSLLEGFSTGHVIKG-------------------- 307 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI-GEKK- 420 + A D P ++ AF MV G L+ + ++ + V+R R GE+ Sbjct: 308 ---------LDGAPPDERPNGTLVHGAFTTMVGAGSALIGLSLITGFVVLRRRRRGERPL 358 Query: 421 ------WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFS 474 WL+ AA G P +A+ GW V E GRQPW +G+ + +T GD + Sbjct: 359 LPTSRPWLIAAACTG-PAAMLAMLTGWEVTEGGRQPWIVGDHM---RVVEGVTGGDAVAP 414 Query: 475 M 475 M Sbjct: 415 M 415 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 198/476 (41%), Gaps = 87/476 (18%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D V L+R F + +H +F L +G+ ++ + E + ++ + Y + K W K I Sbjct: 1 MDNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + +G + W Y VG + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + VALG+ SA+ I A+ WM P F++ + V E V NP Sbjct: 120 SPTMRIITVFFVALGATASAVLITDAHAWMNTP--RGFDYVDGVVSNVRPLEAVFNPSIY 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG----RDFAFAKRSFAIAASFGMAAVLSVIVL 237 V +H + S Y+TGA + ++A+ + +G R+ + K+ + S G+A V+S Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLML--SLGVALVMSFYTA 235 Query: 238 --GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 G ++ + + KLAA E +ETQ A + G PD E Sbjct: 236 NNGHDTAIMLHEEIPVKLAAAEGLFETQDN-APLAILGTPDPEAG--------------- 279 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 R+ G++ +L L +GSTD V+ Sbjct: 280 ---------------------RVIGGIEIPGMLSWLATGSTDGVVQG------------- 305 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFA--FRIMVACGFLLLAIIALSFWSV-I 412 + +D P PL+ F +MV G +LL + + FW + Sbjct: 306 ----------------LNDFPRDEWP---PLFVHTLFNVMVGIGTVLLGLAGI-FWVIWF 345 Query: 413 RNRIGEK---KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS 465 R +K KWLL A + PL I +E GW + GRQPW I V TA A ++ Sbjct: 346 LGRKKQKAFPKWLLGALILCGPLSMIGIETGWIFSCTGRQPWTIFGVQRTAEAATN 401 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/303 (27%), Positives = 148/303 (48%), Gaps = 4/303 (1%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +R Q L+ +H +F + + ++ I + ++ +G + Y + +K K I FA+G Sbjct: 7 ARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAILFAVGA 66 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 +G + F+ G W + G++ G P ++EG AFF E+ F+G++ +G +L H+ Sbjct: 67 VSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEGF-AFFTEAIFLGIYLYGRGKLSPRLHL 125 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 LVAL LSA ++++ N M +P + F R + + +P + + +H Sbjct: 126 LSGALVALSGALSAFFVILVNACMNDP--AGFTMVDGRPANIDPVAAMFSPPWKHETLHG 183 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + + Y A + GI A +L+ +++FA+ + L+ ++G + E+G Sbjct: 184 ILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAVTLAIAGVTALAQPLVGHYAAVEVGR 243 Query: 248 VQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGL 307 Q KLAA+EA +ET A A + G+PD E +AI+IP L + D V GL Sbjct: 244 GQPAKLAAMEAHFETS-ARAPLLVGGLPDVERGEVDYAIEIPAGLSVFLHADPDAVVTGL 302 Query: 308 KEL 310 + Sbjct: 303 DAI 305 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 5/91 (5%) Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACG--FLLLAII-ALSFWSVIRNRIGEKKWL 422 DA + +D P V + +F++MV G LLA++ A+ W R I +++ Sbjct: 296 DAVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAVVGAVLAWR--RRGIPDQRPF 353 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 L AA+ PL +A+EAGW V E GRQPW + Sbjct: 354 LWAAILASPLGIVAMEAGWLVTELGRQPWIV 384 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 129/492 (26%), Positives = 206/492 (41%), Gaps = 78/492 (15%) Query: 14 LTAMYHFLFVPLT-LGMAFLLAIM--ETVYVLSGKQIYKDMTKFWGKLFGINFALGVATG 70 + AM + +PLT G+AF ++ E +Y+ +G +Y+ + + W ++ FA+GV TG Sbjct: 27 MQAMSFAVHIPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIMVALFAVGVVTG 86 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + F+ G W + GD+FG AIEG AFFLE+ F+ ++ +GWDRL H Sbjct: 87 TILSFELGMLWPEFMGTFGDVFGLGFAIEGF-AFFLEAIFIAIYVYGWDRLPPKWHFASG 145 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVS---FSELVLNPVAQVKFVHT 187 + + L A ++ NGWM NP F + E V + L N + VH Sbjct: 146 FPIVFTGVLGATMVIAVNGWMNNP----GGFRLVNGEAVDVKPWEALFGNSFFWHEVVHM 201 Query: 188 VASGYVTGAMFILGISAWYMLK-GRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 + Y+ + + AW L+ GR + + + AI + A +++GD + E+ Sbjct: 202 YVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVGDWAAREVA 261 Query: 247 DVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIG 306 Q KLAAIE T A+ +FG D++ + I+IP L ++A + V G Sbjct: 262 VHQPVKLAAIEGLQRTTSG-ASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFHDPNATVRG 320 Query: 307 LKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVAD 366 L S+ + R G + VR F +M +G GL + Sbjct: 321 LD-----------------SVPPEDRPGPINT-VRFAFQAMVL-IGSGLAML-------- 353 Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAA 426 A + + K +PR S W RA Sbjct: 354 AVFVLLVRWRKGRLPR------------------------SVW------------FYRAL 377 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 + P +A+ GW E GRQPW + V+ T A + AG + L+ +Y L Sbjct: 378 VLAGPGAVVALICGWITTEVGRQPWVVYNVMRTDEAVTG--AGGVPVGYGLLALVYVGLL 435 Query: 487 VAELFLMFKFAR 498 VA +++ + AR Sbjct: 436 VAVWWILRRLAR 447 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 6/302 (1%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +R Q + +H + +GM L + +G Y+ + + W + G+ FA+G Sbjct: 21 ARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFAVGA 80 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 +G + F+ G W GD+ G P +EG AFF+E+ F+G++ + WDRL H+ Sbjct: 81 VSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEGF-AFFIEAIFLGIYLYAWDRLPPRVHL 139 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 V L SA +++ AN WM P F+ + V E + NP + VH Sbjct: 140 LTGVPVVLAGVASAFFVVTANAWMNQP--RGFDLVDGEVVGVRPWEAMFNPATPPQTVHM 197 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + + ++ + + A + +GR + F + +F + +GD + + +G Sbjct: 198 IVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVPFTFAAVLAPVQVAVGDWAAHFLGQ 257 Query: 248 VQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGL 307 Q KLAAIE T P A +L GI E ++A++IP AL ++A D V+GL Sbjct: 258 YQPLKLAAIEGLARTAPG-APLSLGGIYTGGEL--RYALEIPNALSLLAHWDPDAIVLGL 314 Query: 308 KE 309 + Sbjct: 315 DQ 316 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%) Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAI---IALSFWSVI 412 LL + P DA + QA P V ++ +F++MV GF L+ + + +S+W Sbjct: 301 LLAHWDP---DAIVLGLDQAPPRFQPPVNVVHLSFQVMVGIGFALVLLGIWLGVSWWR-- 355 Query: 413 RNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLI 472 R + +W L A+ P +A+EAGW V E GRQPW + +VL T A + L Sbjct: 356 RRDLPRSRWFLLASAAAGPAAVVAMEAGWVVTEVGRQPWIVYDVLLTRDAVNPQPG--LW 413 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 ++ + +Y + A + ++ + ARLGP ++ Sbjct: 414 AGLLTVLVVYAVLTAATVHVLRRLARLGPVPVR 446 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 51/81 (62%), Positives = 68/81 (83%) Query: 435 IAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMF 494 + +E GWF+AEYGRQPWAI E+LP V+ S+L+ GDL FS+ LIC LY F++ E++LMF Sbjct: 1 MPIECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMF 60 Query: 495 KFARLGPSSLKTGRYHFEQSS 515 K+ARLGPS+LKTG+Y+FEQS+ Sbjct: 61 KYARLGPSALKTGKYYFEQSA 81 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/62 (88%), Positives = 59/62 (95%) Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 +ANSSLT GDL+FSM LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS+ T+QP Sbjct: 1 MANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSTVTSQP 60 Query: 521 AR 522 AR Sbjct: 61 AR 62 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 122/516 (23%), Positives = 208/516 (40%), Gaps = 89/516 (17%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R F T +H +F L +G+ ++ + E +Y + Y M K W K + Sbjct: 1 MDDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + TG Q W + +G + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + V +G+ SA+ I + + P + F ++ V NP Sbjct: 120 SPAMRIVAVFFVLVGAAASAVLITNVHAFEGTP--AGFKILNGKITDVDPWAAFFNPSFF 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD----FAFAKRSFAIAASFGMAAVLSVIVL 237 + H V S ++TGA + ++A+ M++ R + F +++ +A + G L + Sbjct: 178 ITAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G ES + + Q KLA E +ET+ + A + G D EE K+AI+IP+AL +A Sbjct: 238 GHESAQMLYEYQPEKLAGAEGLFETR-SHAPLAIGGFTDPNEEKVKWAIEIPWALSFLAA 296 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 DT V G+ A+ R + FN+M +G G+LL Sbjct: 297 NRFDTVV---------------KGLNAFP-----RDEWPPLFIHTLFNAM---VGVGMLL 333 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Y+ + ++ + KD P + F M A F L+ I Sbjct: 334 ILYS--IIGVVWRKVLK--KDRFPTWLLIIF----MTAGPFSLIGI-------------- 371 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 E GW A GRQPW I +L T+ ++ + ++F Sbjct: 372 --------------------EFGWIFACTGRQPWVIYHLLKTSDVVTTTGSIGVLF---- 407 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 LF F +A LG + + Y+F + Sbjct: 408 ------------LFFTFVYAVLGAAVVYVLLYYFRK 431 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 188/469 (40%), Gaps = 75/469 (15%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +R A T H L VP + + F+ +M + + + + W + + FA+G+ Sbjct: 19 ARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFAIGI 78 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 TG + F+FG W GD+FG +E AFFLE+ + ++ +GW RL H Sbjct: 79 ITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPWTHF 137 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 + + L + + A I+ AN WM P + + + V + + P+ ++ H Sbjct: 138 WLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQGKPIH-VDVRQAIFTPMFGPEYWHF 196 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI--VLGDESGYEM 245 V + +T + G+ A L+GR + + F + F +AA+L+ + +LGD Sbjct: 197 VVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTL--PFTVAAILTPVQFMLGD------ 248 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIP-YALGIIATRSVDTPV 304 +A A + QP A T E K +P Y G Sbjct: 249 --------SAARAVFHKQPIKFAAT--------EIVWKTDTHVPEYMFG----------- 281 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 + + I G+K + QL S +L + P+ Sbjct: 282 ------RLNSDGTISGGLK----IPQLDS----------------------ILAGFKPST 309 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE-KKWLL 423 + + + + + ++AF IMV G LL+ + WS R+R +W Sbjct: 310 QVTGLTSVPASDRPTAVQATIAHWAFDIMVTIGSLLILLALWYAWSWWRHRDNPGSRWFY 369 Query: 424 R-AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDL 471 R AAL G+ + VE GW E GRQPW + + + + A +S AG L Sbjct: 370 RCAALAGLAC-LVTVECGWITTEVGRQPWIVYQHMRVSEAVTSTRAGSL 417 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 73/119 (61%) Query: 36 METVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAP 95 ME +++ + +IY + KFW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNP 154 + +E + AFFLE+ F+G+ FGW R H+ T LV LG++ SA WIL N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTP 119 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 116/460 (25%), Positives = 184/460 (40%), Gaps = 78/460 (16%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V LSRL LT +H +F + +G+ ++ E + + Y + + W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 A+GV TG + Q W G PL +E AFF E+ F+G++ + WDR Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFMETF-AFFFEAIFLGIYLYTWDRFK 122 Query: 123 KV-QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + V +G+ LSA +I N +M +P F + + + + N Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSP--EGFKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-----DFAFAKRSFAIAASFGMAAVLSVIV 236 K H + S Y+T A + I+A+++L+ + + A+ K++ + G+ S + Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 +GD SG + Q KLAA AEW + A +FG Sbjct: 241 VGDFSGKYLAKYQPEKLAA--AEWHFETTNEAELIFG----------------------- 275 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 G+ + I+ +K L L G+ D V K+D Sbjct: 276 ---------GILDEQADGSYEIKGAVKIPYALSILAGGAPDTEVIGLNEFAKED------ 320 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLY--FAFRIMVACGFLLLAIIALSFWSVIRN 414 APL+ + F IMV+ G L AI AL + Sbjct: 321 --------------------------QAPLFVHYFFDIMVSIGMYLAAISALFILAFRLK 354 Query: 415 RIGE-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 ++ KWLLR G PL +++EAGW AE GRQPW + Sbjct: 355 KLNPYNKWLLRGIFIGGPLAIVSIEAGWMYAEIGRQPWTL 394 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/72 (54%), Positives = 53/72 (73%) Query: 378 DSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAV 437 D++PRV PL++ RIM A G L+A A++ WS ++ EK+W LR AL+ +PLPWIA+ Sbjct: 2 DTVPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIAI 61 Query: 438 EAGWFVAEYGRQ 449 E GWFVAEYGR+ Sbjct: 62 ECGWFVAEYGRR 73 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 62/84 (73%), Gaps = 3/84 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++IV L+R QFA+T ++HF FVP ++G F++AIME++YV +GK YK MTKFWG +F + Sbjct: 8 MNIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLL 67 Query: 62 NFALGVATGLTMEFQFGTNWSYYS 85 +FA+GV TG+ F F +SY S Sbjct: 68 SFAVGVVTGI---FCFFIGYSYSS 88 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 15/263 (5%) Query: 53 KFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVG 112 +FW + F ++F L +A L + Q G+ W +G++ G + L F L+S F+G Sbjct: 54 RFWVRFFALSFVLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLSVFILKSCFLG 113 Query: 113 LFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFS 172 + FG R+ + H ++VA+G ++ W+L W+Q P + R ++ + Sbjct: 114 VMLFGQRRVSERVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGA--TLIDARYQVYDWY 171 Query: 173 ELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLK-----GRDFAFAKR-SFAIAASF 226 V NP T + A ILG++A L+ G AF A+AAS Sbjct: 172 AAVFNPSLGWNLGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKTALVVAVAASL 231 Query: 227 GMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 A VL D +G M + Q K AA W + P +TLFG PD + N+ A+ Sbjct: 232 LQAPVL------DGAGRVMAEHQPAKAAAAAGYWHSGAEP-GWTLFGWPDARAQANRAAL 284 Query: 287 QIPYALGIIATRSVDTPVIGLKE 309 +P A G R GL + Sbjct: 285 ALPGAGGAWLGRDAQGVYQGLDK 307 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 107/477 (22%), Positives = 201/477 (42%), Gaps = 96/477 (20%) Query: 19 HFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFG 78 H L V + + + +++I E V + ++Y + K I FA+G A+G+ + + Sbjct: 19 HILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALIIFFAVGTASGVVVAIELF 78 Query: 79 TNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL-GKVQHMCVTWLVALGS 137 W + +G + PL +E + AFF E+ F+G++ + W++ +++H ++ +A+G+ Sbjct: 79 VLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNKFKSRMKHWLLSVFIAIGA 137 Query: 138 NLSALWILVANGWMQNPIASDFNFETMRMEMVSFSEL-VLN-PVAQVKFVHTVASGYVTG 195 +S ++I + N +M P + + +++ + VLN P V+ H + S G Sbjct: 138 VMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNTPTTWVEIGHVIGSTIFAG 197 Query: 196 AMFILGISAWYML--KGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKL 253 A F L A+ +L KG + + K++ IAA+ + +++ +++G ES ++ Q K Sbjct: 198 AAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTVIIGIESITDLMLYQPEKF 257 Query: 254 AAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQ 313 AA+E + + P A E F ++ ++VD+ Sbjct: 258 AALEMNFNSGPHVA-----------EVIGGF---------LVNNKTVDS----------- 286 Query: 314 HEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQ 373 + L+ L +GS + A+ A+ + Sbjct: 287 --------INIPGLMSFLATGSFNGAI--------------------------ASNDSLA 312 Query: 374 QATKDSIPRVAPLYFAFRIMVACGFLL--LAIIALSFWSVIRNRIGEK-------KWLLR 424 K + P VA ++ F IMV G L+ + II L W + +I +K +L Sbjct: 313 AYPKSTWPPVAVVHNTFDIMVGIGVLIGVVMIIFLLIWLLNIRKIRDKFESNHFFNKILS 372 Query: 425 AALYGIP---------------LPWIAVEAGWFVAEYGRQPWAIGEVLP-TAVANSS 465 ++ P L +E GW E GRQPW I V+ +A AN+S Sbjct: 373 NKIFSDPFDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAAANTS 429 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 13/273 (4%) Query: 11 QFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATG 70 FA T H LFV L++ +A + I E + + + Y + K I FA+G A+G Sbjct: 12 MFAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTASG 71 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMCV 129 M + W + VG + P +E + +F LE+ + ++ + W D + +H + Sbjct: 72 TVMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWAL 130 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV--LNPVAQVKFVHT 187 + V +G+ LSA + N WM P + + + +++ + L P + +H Sbjct: 131 SLAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELHM 190 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFA---FAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 + Y G + ILG A+ LK + + +R I A F A+L +I LG E Sbjct: 191 SGAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVF---AILDIIYLGATGSNE 247 Query: 245 MGD---VQKTKLAAIEAEWETQPAPAAFTLFGI 274 + ++ K AA+E + A +FG+ Sbjct: 248 LSTLLVIEPLKYAALEQDMVPVTYGAPEHIFGV 280 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 37/74 (50%), Positives = 53/74 (71%) Query: 393 MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWA 452 M+A G L+ + +F +RN++ + LL+ L+G+PLPWIA+E GWF+AEYGRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IGEVLPTAVANSSL 466 I E+LP V+ S+L Sbjct: 61 IYEILPVGVSASNL 74 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 20/322 (6%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDM-TKFWGKLFG 60 ++I RL FA + H L V +++G++ +L ++E + + K +Y D+ T+ K Sbjct: 1 MNIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYI-AIKYKDVYYDLLTRRVAKALV 59 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 + FA+G A+G M + + + + + P E + AFFLE+ + +++ WD Sbjct: 60 MFFAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDV 118 Query: 121 L-GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV--LN 177 ++ H +T+ VA G+ SA++I + N WM P + ++ +++ + + L Sbjct: 119 FKNRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFITALT 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSF--AIAASFGMAAVLSVI 235 P + H V G M + A+ L+ + AK + + +F M L +I Sbjct: 179 PSTGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKT-EEAKTLYMKGLKVTFPMNMFL-II 236 Query: 236 VLGDESGYEMGDV---QKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKF----AIQI 288 + G EM + Q K AA++ A LFG E+ + I+I Sbjct: 237 MAGLSGTLEMSGLLTYQPEKYAALDLNPYPIARDAPEHLFG--TIVEKNGHYYVLGGIKI 294 Query: 289 PYALGIIATR-SVDTPVIGLKE 309 P+ ++A +++TPV GL + Sbjct: 295 PFVQSLLAGNGNLNTPVPGLSQ 316 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 6/162 (3%) Query: 151 MQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG 210 M P + F + +M V E + NP V+ H + + +T A I I+A+ +L+ Sbjct: 1 MNTP--AGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 R---DFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPA 267 R D + K++ ++ G + L ++ GD S + Q KLAA E ++T + A Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTS-SHA 117 Query: 268 AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKE 309 LFG+ D++ + K AI++P L +A SV T V GL + Sbjct: 118 KLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLND 159 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 8/156 (5%) Query: 364 VADATEAQIQQATKDSIPRVAP---LYFAFRIMVACGFLLLAIIALSFWSVIRNRI---G 417 +AD + Q D + P +++ F +MV G L I + +++ ++ Sbjct: 145 LADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRNFS 204 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 KW+L L P +A+E GWF+ E GRQPW + + VA ++ AG + F +L Sbjct: 205 THKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYM--RVAEAATQAGGITFVTIL 262 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 LYT+ + +++ + + P+ R +Q Sbjct: 263 FGILYTILMYTCAYVLIRMFKNKPAYEDVNRLAKKQ 298 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 174 LVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLS 233 +V NP + VH + ++ A F+ G++AW++L+ R+ A+ +++ + A Sbjct: 6 IVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALLAAPL 65 Query: 234 VIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAA---FTLFGIPDQEEETNKFAIQIP 289 ++ GD G + Q ++AA+E +W+ + AP + LF IPD E N + + IP Sbjct: 66 QLLAGDRQGENTLEHQPQRVAAMEGDWDAR-APGSGEPMVLFAIPDMRERRNHYEVSIP 123 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 15/259 (5%) Query: 11 QFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATG 70 FA T H L V L++G+A + I E + + + Y + K I FA+G A+G Sbjct: 16 MFAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTASG 75 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMCV 129 M + W + VG++ P +E + +F LE+ + ++ + W D + +H + Sbjct: 76 TVMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWGL 134 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASD---FNFETMRMEMVSFSELVLNPVAQVKFVH 186 + V +G+ LSA + N WM P D F + F+ + A + +H Sbjct: 135 SLAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFITASTAAEE-LH 193 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFA---FAKRSFAIAASFGMAAVLSVIVLGDESGY 243 + Y G ILG + LK + + +R I A F +L +I LG Sbjct: 194 MSGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVF---MILDIIYLGITGSN 250 Query: 244 EMGD---VQKTKLAAIEAE 259 E+ ++ K A+E + Sbjct: 251 ELSTLMVIEPIKYTALELD 269 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 74/135 (54%), Gaps = 1/135 (0%) Query: 372 IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIP 431 +++ K+ P V ++++FR+MV G L++ I ++S +R ++ + +L + +P Sbjct: 69 LKEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFLHGWWISMMP 128 Query: 432 LPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICGLYTLFLVAEL 490 +IA+ AGWF E GRQP+ + ++ T + +S++T + +S++ +YTL A Sbjct: 129 SGFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLIAFIVMYTLIFGAGS 188 Query: 491 FLMFKFARLGPSSLK 505 + + K G +K Sbjct: 189 YYILKLIYKGIPVIK 203 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD G Q TK+AA+E WET+ A LF PDQ+ E N + I+IP +I T Sbjct: 1 GDRHGLNTLKHQPTKIAAMEGIWETEKG-AGLLLFAYPDQQNEINHYEIKIPNLASLILT 59 Query: 298 RSVDTPVIGLKELMVQHEER 317 V GLKE + E+R Sbjct: 60 HDFLGEVKGLKEW--KKEDR 77 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 1/136 (0%) Query: 19 HFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFG 78 H+ + +G++FL I +Y + + ++ + K F I FA+G ATG EF Sbjct: 27 HWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVFAVGAATGTASEFGLV 86 Query: 79 TNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSN 138 W + G PL E + AF LE F+ L ++GW + GK + + +L +G Sbjct: 87 LLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGKSAMVVLLFLSFIGPW 145 Query: 139 LSALWILVANGWMQNP 154 SA I+ N +M P Sbjct: 146 YSAAMIVSVNSYMVAP 161 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 1/149 (0%) Query: 6 ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFAL 65 L R AL +H +++ LT G+ + +M + +G ++Y + + +NFAL Sbjct: 65 NLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLAVNFAL 124 Query: 66 GVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQ 125 G TG +EF W + + PLA+E L+AF E F+ LF R+ Sbjct: 125 GAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGRVRPPV 183 Query: 126 HMCVTWLVALGSNLSALWILVANGWMQNP 154 + + A + LS + I N WMQ P Sbjct: 184 SIAILAAYAGFAYLSGVLITTVNSWMQAP 212 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 18/119 (15%) Query: 394 VACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 V G L LA W R RI ++KW R L +P P++A +GW E GRQPW Sbjct: 5 VGSGVLALA----GLWVTRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWV- 59 Query: 454 GEVLPTAVANSS--LTAGDLI---------FSMVLICGLYTLFLVAELFLMFKFARLGP 501 V+P + S LT D + FS+V +Y + + L+ ++ GP Sbjct: 60 --VVPNPNGDQSIRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/35 (65%), Positives = 28/35 (80%) Query: 111 VGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWIL 145 +GLFFFGWDRL K +H+ T+ VA GSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWIF 35 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 41/62 (66%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V L+R QFA +HF+F ++G+A L ++E +++ +G+ +Y ++ ++W K+F + Sbjct: 5 LDPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAV 64 Query: 62 NF 63 F Sbjct: 65 VF 66 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 4/139 (2%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 ++ +R A+ + H LG + I E +Y++ + + D + + + I F Sbjct: 15 LDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIFFG 74 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G A G +EF T WS + +G P +E L AF E + L+ F W GKV Sbjct: 75 VGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTW---GKV 130 Query: 125 QHMCVTWLVALGSNLSALW 143 ++ V W++ L + W Sbjct: 131 RNGWVHWVIGLAAAFGGYW 149 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 7/168 (4%) Query: 145 LVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISA 204 + AN WM P + + V V P+ ++ H V +T + G+ A Sbjct: 1 MAANAWMNTPRGFTLDASGNPVN-VDVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYMLKGRDFAFAKRSFAIAASFGMAAVLSVI--VLGDESGYEMGDVQKTKLAAIEAEWET 262 +L GR + + F + F +AA+L+ + +LGD + Q K AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTV--PFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKT 117 Query: 263 QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKEL 310 + +FG + + I+IP I+A SV+T V GL + Sbjct: 118 GTHMPEY-MFGRLRSDGSISG-GIKIPQLDSILAGFSVNTKVTGLSSV 163 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 387 YFAFRIMVACGFLLLAIIALSFWSVIRNR-IGEKKWLLRAALYGIPLPWIAVEAGWFVAE 445 ++AF IMV G LL+ + W +R+R + W R A + VE GW E Sbjct: 178 HWAFDIMVTIGSLLVLLALWYGWCWLRHRGLPRSPWFFRCAAVAGAACLLTVECGWITTE 237 Query: 446 YGRQPWAI 453 GRQPW + Sbjct: 238 VGRQPWIV 245 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 42.0 bits (97), Expect = 0.061, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 256 IEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLK 308 +E +++ P A LFG+PDQE T ++A+++P +I ++ P+ GL Sbjct: 1 MEGHYQSHPDGAPLILFGLPDQEAGTVRYAVEVPKLSSLILKHGLNEPLNGLD 53 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 4/140 (2%) Query: 372 IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIP 431 + +++ P V ++++FR+MV+ G L+L + S + + ++ E L R AL P Sbjct: 52 LDTVPRENWPPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHRFALTMGP 111 Query: 432 LPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT----AGDLIFSMVLICGLYTLFLV 487 ++AV AGW E GRQP+ + +L TA + S L+ A LI +++ ++ + ++ Sbjct: 112 AGFVAVVAGWITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIYFAVFGMGVL 171 Query: 488 AELFLMFKFARLGPSSLKTG 507 L LM K G ++ G Sbjct: 172 YILHLMAKSPYRGEHGIEPG 191 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 642 0.0 UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 598 e-169 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 541 e-152 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 512 e-143 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 508 e-142 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 499 e-140 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 494 e-138 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 494 e-138 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 473 e-132 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 472 e-131 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 468 e-130 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 467 e-130 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 462 e-128 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 461 e-128 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 458 e-127 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 449 e-124 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 447 e-124 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 446 e-123 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 444 e-123 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 443 e-123 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 442 e-122 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 442 e-122 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 436 e-121 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 436 e-120 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 432 e-119 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 432 e-119 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 427 e-118 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 426 e-117 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 424 e-117 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 424 e-117 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 417 e-115 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 416 e-115 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 415 e-114 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 410 e-113 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 410 e-113 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 409 e-112 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 406 e-112 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 404 e-111 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 403 e-111 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 402 e-110 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 402 e-110 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 397 e-109 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 395 e-108 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 395 e-108 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 393 e-108 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 393 e-107 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 392 e-107 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 392 e-107 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 391 e-107 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 389 e-106 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 387 e-106 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 383 e-105 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 380 e-104 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 380 e-104 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 377 e-103 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 376 e-102 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 373 e-102 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 371 e-101 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 369 e-100 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 366 1e-99 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 364 4e-99 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 363 6e-99 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 363 8e-99 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 363 1e-98 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 362 2e-98 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 355 3e-96 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 352 2e-95 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 352 3e-95 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 350 8e-95 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 344 4e-93 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 343 7e-93 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 341 3e-92 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 341 5e-92 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 340 6e-92 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 340 7e-92 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 339 2e-91 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 335 2e-90 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 333 7e-90 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 333 7e-90 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 329 2e-88 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 325 2e-87 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 323 1e-86 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 319 2e-85 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 318 2e-85 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 316 1e-84 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 311 5e-83 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 307 5e-82 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 305 2e-81 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 304 5e-81 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 303 1e-80 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 303 1e-80 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 302 2e-80 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 302 2e-80 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 294 6e-78 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 293 8e-78 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 293 1e-77 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 292 2e-77 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 287 8e-76 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 279 2e-73 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 271 6e-71 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 269 2e-70 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 268 3e-70 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 266 2e-69 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 265 2e-69 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 259 2e-67 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 244 7e-63 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 237 7e-61 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 231 6e-59 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 231 7e-59 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 225 2e-57 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 223 1e-56 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 216 2e-54 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 215 4e-54 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 206 2e-51 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 189 2e-46 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 186 2e-45 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 163 1e-38 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 153 2e-35 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 151 6e-35 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 139 2e-31 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 133 2e-29 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 129 3e-28 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 128 6e-28 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 121 7e-26 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 120 1e-25 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 103 2e-20 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 99 3e-19 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 92 4e-17 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 89 4e-16 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 81 9e-14 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 81 1e-13 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 74 1e-11 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 50 2e-04 Sequences not found previously or not previously below threshold: UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 149 2e-34 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 119 3e-25 UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome b... 97 2e-18 UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive... 94 1e-17 UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like... 91 1e-16 UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like... 91 2e-16 UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales ... 88 9e-16 UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like... 86 3e-15 UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like... 86 3e-15 UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like... 83 3e-14 UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 79 5e-13 UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibri... 79 6e-13 UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like... 78 7e-13 UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like... 77 2e-12 UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalob... 75 5e-12 UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter c... 74 1e-11 UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=... 73 2e-11 UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like... 73 3e-11 UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like... 72 4e-11 UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like... 72 4e-11 UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfo... 69 5e-10 UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 65 9e-09 UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfuri... 64 2e-08 UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like... 63 3e-08 UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibiu... 62 5e-08 UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea Rep... 62 6e-08 UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulf... 60 2e-07 UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubroba... 59 5e-07 UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensi... 54 1e-05 UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobac... 54 1e-05 UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobac... 53 2e-05 UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales R... 53 4e-05 UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibri... 52 4e-05 UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp... 52 5e-05 UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas in... 51 1e-04 UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=... 49 5e-04 UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chlorof... 48 9e-04 UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinens... 47 0.001 UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n... 47 0.002 UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcu... 45 0.007 UniRef50_D1XIB5 General substrate transporter n=1 Tax=Streptomyc... 41 0.097 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 358/511 (70%), Positives = 430/511 (84%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +V+LSRLQFA+TA+YHFLFVPLTLGM FLLAIME+VYV++GKQ+YKDM KFWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV TG+TMEFQFGTNW+YYSHYVGDIFGAPLAIEGL AFFLESTF+G+FFFGWDRL Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K+QH+ VTWLVALGSNLSALWILVANGWMQ+P+ ++FNFETMRME+V F L+LNPVAQV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHTVASGYVTGA+F+L IS++Y+LK RD FA+RSFAIA++FGMA++LSVIVLGDESG Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 YE+G+VQK KLAAIEAEWET PAPA+FTL G P++EE+ FA++IP+ LGIIATRS+D Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 VIG+K+L+ HE RIRNGM Y LLE+LR+G+ FN +K DLGYGLLLK+YTP Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 NV DA+E QI+QA KD+IP VA ++++FR MV GF +L + +FW+ R K WL Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 L+ ALY +PLPWIA + GWFVAE+GRQPW IG VLPT ++ SSL+ GDL S++ + Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 TL LV E++LM +FARLGPSSL TGRYHFEQ Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHTGRYHFEQ 515 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 301/506 (59%), Positives = 384/506 (75%), Gaps = 2/506 (0%) Query: 1 MLD--IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL 58 M+D +VELSRLQFA+TAMYHF+F PLT+G++FLL IME+VYV++GKQI++ MT FWG L Sbjct: 16 MIDSTVVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVL 75 Query: 59 FGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW 118 FGINFA+GV TG+ MEF+FG NWSYYSHYVGDIFGAPLAIEGLMAFFLE+TF+GLFF GW Sbjct: 76 FGINFAMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGW 135 Query: 119 DRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNP 178 +RL KVQH+ TWLVALGSN SALWIL+ANGWMQNP + FN +TMRME+V F ++ NP Sbjct: 136 NRLSKVQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNP 195 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 VAQ KFVHTV++GYV GA+F++ ISA+Y+L+G+ A+RSFA+AA+FG+ + LSV+VLG Sbjct: 196 VAQAKFVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLG 255 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 DESGY + QK KLAAIEA WET+ APA FT FGIP+Q N +AI+IPY +G+IATR Sbjct: 256 DESGYAASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATR 315 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 S+D P+ G+ EL+ + E RIR G AY L+++R+ D R F++ +DLG+GLLLK Sbjct: 316 SLDEPIPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLK 375 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 RY ++ +AT QI QA D++PRV PL++ FRIM A G L+A A++FW ++ E Sbjct: 376 RYRDDIGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQE 435 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 K+W L AL+ +PLPWIA+E GWFVAEYGRQPWA+ VLPT A S L +++ ++V Sbjct: 436 KRWFLSLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGF 495 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSL 504 LYT LV + L K GP L Sbjct: 496 TALYTTLLVIAIKLSLKTINKGPEVL 521 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 256/507 (50%), Positives = 342/507 (67%), Gaps = 8/507 (1%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V+LSR QFALTA+YHF+FVPLTLG+ F+LA METVYV++G+QIYKDM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATG+TMEF+FGTNWS YSH+ GD+FG PLAIEGLMAFF+ESTFVGL FFGWDRL Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+LVALGSNLSALWIL+AN M P + F+ ETMRM+ SF LV NP AQ Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHT +GYV+ AMF++GISA+Y+L+G+ FA RSF +AA FG+ + ++VI LGD G Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q TK+AAIE W T P + L +PD ++ N F + +P L + T + D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 P+ G+ EL RIR+G++A S L + +D A F ++D+GYGLL R+ Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSD-ADLTLFTQHEQDMGYGLLAARHA 365 Query: 362 PNVADATEAQ------IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 PN + ++ D +P V +++FR MV A+ A+S + ++ R Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 + K LL+ ++ IPLP +A E GW AE GRQPW + LPT ++ SS ++FS+ Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPS 502 + LY++F+ AEL+LMFKFARLGP Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGPE 512 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 244/511 (47%), Positives = 354/511 (69%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V LSR QFALTA++HFLFVPLTLG+ ++L IM +VYV +G IYKDMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG+T+EF+FG NW+Y+S +G F LA+EG+ AF LE+T GLFFF W+++G Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+L+ALG++LS + IL AN WMQ P A+ FN++ M +E+ S L LN +AQ+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H G++TG++F++G+SA+Y+L GRD FAKRSFA+ FG+ L+V GD++G Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ + K+AAIEA+W+TQ PA+++L P Q+E+ N F I IPYAL +IAT S+ Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 V G ELM +++RI NGM AY + ++ R +N K DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 V ++T A+I+ AT+D+IP +A +++FR M L+L ++ F+ RN + + + Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 LR ALY IPLP++A E GW +AE GRQPW++ E+LPT ++ S+++ ++ S++ Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 + V ELFLMFK+AR GPSSL+TGRY+FE+ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLETGRYYFER 516 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 499 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 198/508 (38%), Positives = 295/508 (58%), Gaps = 16/508 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR QF +TA YHFLFVPLTLG+A ++AI++T+Y+ + + Y ++ F KLF I Sbjct: 1 MDLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATGLTMEF+FGTNW YS VGDIFGAPLAIEGLMAFFLESTF+GLF FG DR+ Sbjct: 61 NFAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN--FETMRMEMVSFSELVLNPV 179 V H W+VALGS LSALWIL+AN WMQ P ++ + +F E LN Sbjct: 121 SDVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++F+H V +GY+ G F++G+ A+Y+LKG+ AK A F + I+ GD Sbjct: 181 SIIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 GY++ + Q K+A +E +WET+ A+ L G+ DQE++ + ++IPY L I++ Sbjct: 241 IHGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHD 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQ-LRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 + G+K+L+ +++++ + +LEQ L+ A +++ +K DL Sbjct: 300 PNAEFKGIKDLVKEYQQKAQEASARIPVLEQKLKELEATNASQEEIQKVKDDLAMAK--- 356 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 ++A+ T + +P VA ++ F +MV GF ++ + + + Sbjct: 357 ---------SQAKAYNITFNDLPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 K L L IPLP+IA GW AE GRQPW + VL T S +++FS++ Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKT 506 +YTL + + M K + GP + K+ Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKS 495 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 262/576 (45%), Positives = 359/576 (62%), Gaps = 63/576 (10%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V+L+RLQF LTA +HFLFVPLTLG+ ++L ME +Y+ +GK++YKDM KFWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 LG+ TGLTMEF+FGTNWSYYS VGDIFG PLAIEGL AF LESTF GLFFFGWD+L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 QH+ T+ +A+GS+ SAL ILVANG+MQ+P+ S+F TMRME VS +L LN AQ F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H + +GY T A+F++GISA+Y+++GRD AFAKRS AI FG+ + I+ GD +G + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 VQ K+AAIEAEW+T APAAF +P Q+E+ N F + IP LG+IAT S DT + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 IGLKELMVQHEE-------------------------------------------RIRNG 321 G+K ++ + I+ G Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIKEG 375 Query: 322 MKAYSLLEQLR----SGSTDQAVRDQFN--SMKKDLGYG-LLLKRYTPNVADATEAQIQQ 374 AY+ L + R SG T + +N + +K +G+G +L++ A A I + Sbjct: 376 GLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATIAK 435 Query: 375 ATKDS----------IPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE---KKW 421 A D +P VA ++++FRIMV GF + +I + + RN + ++ Sbjct: 436 AANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFSRF 495 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 +LR ++ IPLP+IA AGW+V E+GRQPW + + LPT++++S+LTA D+ SM + + Sbjct: 496 ILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFFLI 555 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 T +FLMFK+ARLGPSSL TG+Y+FEQ+ + Sbjct: 556 DTALFAVMVFLMFKYARLGPSSLGTGKYYFEQNKKS 591 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 193/522 (36%), Positives = 292/522 (55%), Gaps = 32/522 (6%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++LSR QFA TA+ HF+FVPLTLG++ +AI++T+ + Y + F KLF + Sbjct: 1 MDLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA GVATGLTMEF+FGTNW YS +VGDIFGAPLAIEGLMAFFLESTF+G+F FG DR+ Sbjct: 61 NFAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF--NFETMRMEMVSFSELVLNPV 179 H W+VALGSNLSALWIL+AN WMQ P + +R E+ +F E V+N Sbjct: 121 SDGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKIVQTPQGIRAELTNFWEAVINHT 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 ++ +HTV +G +T F++G+ A+++L+ ++ AK +A F + +S I++GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 +G+ + + Q KLA +E +W T+ PA+ +FG DQ + IQIP L ++ + Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTEQ-PASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 D V G+ +L+ ++++ +N LE + + + A++D+ Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDKI--------------- 344 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 VAD A+ + +P + ++ F IMV GF + + + + Sbjct: 345 ----VADKAYAKAYNISLKDLPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 K L+ LY IPLP+IA E GW AE GRQPW + VL TA A S + +++FS++ Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPA 521 +Y L + M K + + + + +T PA Sbjct: 461 TIYILLFYVYVTTMIKKVKE----------YEDTEAPSTAPA 492 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 214/516 (41%), Positives = 308/516 (59%), Gaps = 36/516 (6%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 ++ SR QFALTA+YH+LFVPLTLG+A ++ I+ET Y + KQ +K+ + FW KLFGINF Sbjct: 35 TIDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQKLFGINF 94 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+EG++AFF+ESTFV + FFGW ++ Sbjct: 95 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFFGWKKVSA 154 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL LG+ +SA WILVAN WMQ P+ FN +TMR EM SF ++ L+P A K Sbjct: 155 GFHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVALSPFAVDK 214 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F HTV S ++ GA+F++G+S+WY+LKGR+ A +S I G+ A L + GD S Y Sbjct: 215 FFHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAALTGDNSAY 274 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEE------ETNKFAIQIPYALGIIAT 297 ++ VQ KLAA+EA + + + G+P + + + I +P AL ++AT Sbjct: 275 QVAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPKALSVLAT 334 Query: 298 RSVDTPVIGLKELMVQH-----------EERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 D V G+ L+ + E+++ G A + L+Q R+G D+A R Sbjct: 335 HDFDGYVPGINNLIDGYVKEDGTKEPSVAEKMQRGRMAITALQQYRAGKKDEATRKTLTD 394 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 K GYG + ++ +P + +++FR+MV G L + + Sbjct: 395 NIKYFGYGYV-----------------KSADQIVPNIPLNFWSFRVMVGLGILFILFFLI 437 Query: 407 SFWSVIRNRIGEK--KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS 464 S R I EK +WL +A+ +PL ++A EAGW VAE GRQPW I ++LPT VA S Sbjct: 438 SGHVSWRKDISEKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDMLPTWVAVS 497 Query: 465 SLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLG 500 L AG ++ + L L+T L E+ ++FK + G Sbjct: 498 DLNAGSVMITFFLFLALFTTMLAVEINILFKQIKKG 533 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 201/522 (38%), Positives = 300/522 (57%), Gaps = 23/522 (4%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 +V SR QFALTAMYH+LFVPLTLG+ ++AI+ET+Y +GK +K +FW KLFGINF Sbjct: 8 LVSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINF 67 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ K Sbjct: 68 AIGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSK 127 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL +G++LSA+WIL+AN WMQ P+ FN +TMR EM F LV + A K Sbjct: 128 GFHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINK 187 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKG--RDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F HT++S + G++F LG+ Y+L+ + FA ++ I A FG+AA L GD S Sbjct: 188 FWHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTS 247 Query: 242 GYEMGDVQKTKLAAIEAEWETQ----------PAPAAFTLFGI-------PDQEEETNKF 284 Y + Q KLAA+E +++ +LFGI P ++E F Sbjct: 248 AYNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLF 307 Query: 285 AIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQF 344 + +P L ++ TR+ V G+ ++ + +G A + ++ G + + Sbjct: 308 NVSVPRVLSVLGTRNPSGYVPGINNILEGGYVK-ADGTTAIPVDSMMQRGRRAIMALNDY 366 Query: 345 NSMKK--DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLA 402 + K+ D+ L K Q D +P + Y++FRIMV G L + Sbjct: 367 SKAKQAGDMEAALQHKSVIDENFPYFGYSYIQHKNDIVPPIGLTYYSFRIMVGLGMLFIL 426 Query: 403 IIALSFWSVIR-NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV 461 + +++ + + + +W A+ +PL W+A ++GW VAE GRQPW I ++LP Sbjct: 427 LFLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPWTIQDLLPVQA 486 Query: 462 ANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 A S L AG +I + + L++ LVAEL +M K + GP + Sbjct: 487 AVSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPET 528 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 208/510 (40%), Positives = 297/510 (58%), Gaps = 11/510 (2%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+ + AIMET+Y +G + +K +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGWD++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL +G+ LSALWIL+AN WMQ P+ FN +T+R EM F + L+PVA Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV SG++ GA+F+LGIS WY+LK R+ FA S ++A FG+ A + +I GD S Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQ-------EEETNKFAIQIPYALGII 295 Y++ Q KLAA+E +E GI + + F I+ P L + Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNG-VGLVGIGILNPAKTSYLDNQNAFIFDIKFPKLLSFL 306 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 A R ++ V G+ L+ + G A S E++ G + KD Sbjct: 307 AERDINAYVPGIVNLI-EGGYTTNKGTVALSAKEKIEKGKAAIKALADYRKAVKDKDTAA 365 Query: 356 LLKRYTPNVADATEAQIQQA--TKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 + + + IP V +++FR+MV G + + ++ + Sbjct: 366 AGQYRVTLEENFPYFGYGYIKDPAELIPHVGLTFYSFRVMVILGCFFILLFIITLIWDKK 425 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIF 473 +I +WL L+ IPL +IA +AGW VAE GRQPWAI ++LPT+ + S L + Sbjct: 426 GKIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQPWAIQDILPTSASISKLNPSSVQT 485 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLGPSS 503 + L L+T+ L+AE+ +M K + GP + Sbjct: 486 TFYLFLILFTILLIAEIGIMVKAIKKGPEA 515 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 215/516 (41%), Positives = 299/516 (57%), Gaps = 34/516 (6%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V+ SR QFALTA+YH+LFVPLTLG+A ++ IMET Y + K+ ++ +FW +LFGINF Sbjct: 12 TVDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINF 71 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+ESTFV + FFGW ++ Sbjct: 72 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSA 131 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL LG+ LSA WILVAN WMQ PI FN ETMR EM SF ++ L+P A K Sbjct: 132 GFHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDK 191 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F HTV S +V GA F +G+S WY+L+ R AK+S I + G+ A L G ES Y Sbjct: 192 FTHTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAY 251 Query: 244 EMGDVQKTKLAAIEAEWETQ-----PAPAAFTLFGIPD-QEEETNKFAIQIPYALGIIAT 297 + Q KLAA+EA +E A F PD E + +P L I+AT Sbjct: 252 MVAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILAT 311 Query: 298 RSVDTPVIGLKELMVQH-----------EERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 +S V G+++++ + +E+ G KA L+ R+G ++ + Sbjct: 312 KSTTGYVPGVRDIIKGYTKADGTKEPSLKEKQERGKKAIQALKDYRAGKDKESNEKILDH 371 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 K GYG + + +P + ++AFRIMV G L + + A+ Sbjct: 372 DMKYFGYGYI-----------------KDANQLVPFIPINFWAFRIMVGLGGLFILVFAV 414 Query: 407 SFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSL 466 + + + I +WL + IPL +IA E+GW VAE+GRQPW I ++LPT A S L Sbjct: 415 MLFLLYKKDITRPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDL 474 Query: 467 TAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 ++G + F+ L L+T L AE+ +M K + GP+ Sbjct: 475 SSGGIAFTFFLFLVLFTAMLTAEVSIMCKQIKKGPA 510 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 179/510 (35%), Positives = 267/510 (52%), Gaps = 52/510 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +DI++++R QF +T +YHFLFVPLT+G+ L+A+MET ++ + + + + KF+GKL I Sbjct: 1 MDILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLV LG+ SA +IL AN WMQ+P+ ++N +T R E+ F ++ N V Sbjct: 121 PRKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG---RDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + F H + + Y+T A FILGISAW RD + + + A + A L V V G Sbjct: 181 ITFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAP-AAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 D G M DVQ K+AA EA ++T A F++F I + ++ K+++ +P L +A Sbjct: 241 DIQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAE 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+ +L +++E Sbjct: 301 GDTDATVEGIDDLRAEYQETYGQ------------------------------------- 323 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 + D P + Y++FR+M+ G L+ A AL W + R Sbjct: 324 ----------DPGAAYYSPGDYTPYIPVTYWSFRLMIGLGALMAAGAALVLWLTRKGRAP 373 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMV 476 +W L L +A GW E GRQPWA+ ++ TA S ++ + S+V Sbjct: 374 TARWFAPMVLSLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKT 506 ++ LY + V E+ L+ K+ R G + Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKGADPFEE 463 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 178/502 (35%), Positives = 262/502 (52%), Gaps = 59/502 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + + L+R+QFA T ++HFLFVP+++G+ F++A+MET+Y++ ++Y M KFWG LF I Sbjct: 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLAIE L+AFF+ES F+GL+ FGWDRL Sbjct: 61 NFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H WLV+ G+ +S+ WIL AN +MQ P+ F + R EM F L+ NP Sbjct: 121 PKKIHALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLW 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 V+F H + TGA FI G+SA+ +LK ++ F K+SF +A G+ A L V + G Sbjct: 179 VEFPHVIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + + Q K+AA E WE PAA+T F D + E + I++PYAL +A + Sbjct: 239 AEHLMESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFS 298 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V G+K L ++E+ G V+ F S + + Sbjct: 299 GSVKGMKTLQAEYEKIYGKGDYIPP-------------VKTTFWSFRIMV---------- 335 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 G +++ W R ++ KW Sbjct: 336 ---------------------------------GAGVVMILAALGGLWLNRRKKLENSKW 362 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICG 480 LR + I P++A AGW + E GRQPW + ++ TA + S +TAG L+FS++ Sbjct: 363 YLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGV 422 Query: 481 LYTLFLVAELFLMFKFARLGPS 502 +Y + +FL + + G Sbjct: 423 MYMILGALLVFLFIREIKKGAE 444 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 212/506 (41%), Positives = 301/506 (59%), Gaps = 15/506 (2%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+A ++ +MET YV +GK+ +K+ KFW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL LG+ +SA WILVAN WMQ P+ FN ET+R EMV F+ + L+P+A Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV S ++ GA+F++GIS WY+L+ R FA S +AA+ G+ A L GD SG Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ VQ K+AA E FT+ G ++IP L I+AT +D Sbjct: 248 VQVAKVQPMKMAAAEGL-HDGGNGVPFTIAG-----------DLKIPKMLSILATHDIDG 295 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK--DLGYGLLLKRY 360 V G+ L+ + ++ +G A S E+++ G A D F K D ++ Sbjct: 296 YVPGINNLL-EGGYQMPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 + +P V +++FRIMV G + + + ++ + + Sbjct: 355 LDENVKYFGYGYIKDPAHLVPNVGLTFWSFRIMVGLGGYFILFFIIVLIVSKKEKLADMR 414 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WL R AL+ IPL +I +AGW VAE GRQPWAI ++LP A S L G + + + Sbjct: 415 WLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFIFLL 474 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKT 506 L+T+ L AE+ +M K + GP +K Sbjct: 475 LFTVLLFAEIGIMLKAIKKGPEGIKN 500 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 197/509 (38%), Positives = 274/509 (53%), Gaps = 47/509 (9%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 +D V L+R+QFALTAMYHFLFVP+TLG++ LLAI+ T + Y+ + +F+ Sbjct: 1 MDAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INFA GV G+ +EF+FGTNWS YS VGDIFGAPLAIE + AFFLES F+G+ FG Sbjct: 61 LFAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 DR+ + TW+VA+G+NLSALWILVAN W Q P F E + + SF + V+N Sbjct: 121 RDRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTPKG--FYLEGGKAYLASFFDAVVN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 +FVH +G +TGA+F+ GISA+Y+LK + AK SF IA + GM A L I+ Sbjct: 179 YSTPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIA 238 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD GY++ Q KLA +E +WET+ + G I+IP L I+A Sbjct: 239 GDLHGYQVARTQPLKLAMMEDKWETESGAGLEIVPG------------IEIPKLLSILAY 286 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+K+L+ ++ + L +L A R Sbjct: 287 HDPDAKVYGIKDLVQTFQKIAKGEEVGEDELPELWLDPRQFAGR---------------- 330 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Q T++ IP +++ R MV GF I +L F +++ I Sbjct: 331 -------------QSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIE 377 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +++WLL+ Y IPLP +A GW VAE GRQPW + +L T A S L AG ++ S++L Sbjct: 378 QRRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIIL 437 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKT 506 +Y + + L LM + GP + Sbjct: 438 FSSIYFIVFLIFLGLMVQKVIKGPKRPEE 466 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 198/518 (38%), Positives = 303/518 (58%), Gaps = 19/518 (3%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++E +R QFA+TA++HF FVP TLGM+F++A ET+YV +GK +K++T+FW +FGIN Sbjct: 5 SMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLIFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+EG++AFFLE+TF + FFGW R+ Sbjct: 65 FAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGWKRVS 124 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIA--SDFNFETMRMEMVSFSELVLNPVA 180 K H+ +WL+A+GSNLSALWIL+ANG+MQ+P + +N + R+EM F ++ PVA Sbjct: 125 KGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMITQPVA 184 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 QVKF+H V+S Y A+F+LGIS+ Y+L+G+ FAK+S +AA+FG+ A + V+GDE Sbjct: 185 QVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAVIGDE 244 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP--------DQEEETNKFAIQIPYAL 292 YE+ + Q TK+AA E + A GIP + +E F I++P L Sbjct: 245 HAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIELPGML 303 Query: 293 GIIATRSVDTPVIGLKELMV--------QHEERIRNGMKAYSLLEQLRSGSTDQAVRDQF 344 ++ R ++ V GLK+L+ E+ G KA L+ + + Sbjct: 304 SLLGKRDINAFVPGLKDLVNGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANGDKAGME 363 Query: 345 NSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAII 404 + + + AD P VAP++++F IMVA GF + + Sbjct: 364 AAKAEFYKVVADVNGVKVTRADLMGYGYLTDPTKLYPPVAPVFYSFHIMVALGFWFILLF 423 Query: 405 ALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS 464 L++ S+++ + + A+ +PLPWI GW AE GRQPW + VLPT+ + + Sbjct: 424 LLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVFGVLPTSESVT 483 Query: 465 SLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 + ++ + L + + +AEL ++F + GP Sbjct: 484 PIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPK 521 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 192/500 (38%), Positives = 268/500 (53%), Gaps = 60/500 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R QF +T++YHFLFVPLTLG++ L+AIMET+YV +G + YK+M +FWG+LF I Sbjct: 1 MDALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EF FG NWS YS +VGDIFGAPLA+E L AFFLESTF+GL+ FGW++L Sbjct: 61 NFAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLVA SNLSA WILVAN +MQ P+ F R EM F L+ NP Sbjct: 121 SPALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F HTV +G+VT A F++GISA+++L+ +RSF +A G+ L V +G Sbjct: 179 YQFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q K+AA EA W++ PA L + DQE + N I+IP +A S Sbjct: 239 GQHLVATQPMKMAAAEALWDSA-DPAPLALVALVDQENQQNNLEIKIPALTSFLAYNSFR 297 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GLKEL E+ G+ V F S + + Sbjct: 298 GEVKGLKELQAAAAEQYGP-------------GNYIPPVAPVFWSFRLMI---------- 334 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 A G L+ + S + + + + Sbjct: 335 ---------------------------------AAGLWLILLSLYSLYLWRKGLLESRPL 361 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICG 480 +L+A L+ IP+P++A AGWFVAE GR PW + + A S ++A ++ ++V Sbjct: 362 VLKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTTLVAFTL 421 Query: 481 LYTLFLVAELFLMFKFARLG 500 LY L V +++L+ K+AR G Sbjct: 422 LYGLLAVVDVYLLAKYARQG 441 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 173/537 (32%), Positives = 264/537 (49%), Gaps = 80/537 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+FVPLT+G+A +LA+M+T +V++ + +T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS +VGDIFGAPLA EGL+AFF ESTF+GL+ FGW RL Sbjct: 61 NFAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 ++ H+ W+VA+ N SA +I+ AN +MQ+P+ + +N E+ R E+ F L+ N A Sbjct: 121 PRLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAV 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD-----FAFAKRSFAIAAS----FGMAAVL 232 F H VA +T F+ G+SA+ M++ + A+ + AA + A + Sbjct: 181 WAFQHAVAGALLTAGAFVAGVSAFLMVRAQRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYAL 292 + V GD G M D Q K+A+ E+ +T P L ++ + +PY L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GIIATRSVDTP-VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +A + G+ +L Q+EER G Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERFGPG------------------------------ 330 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 Y PN+ A FR M+ + +A ++ W Sbjct: 331 -------DYRPNLFVTYWA-------------------FRAMIGLLLVPVAFALVTVWLT 364 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV--------LPTAVAN 463 R RI ++W A + IP P++A AGW E GRQPW + + Sbjct: 365 RRGRIPHQRWYGWAGVLTIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRMTVQDGV 424 Query: 464 SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 S+ +AG ++FS+V+ +Y V LM ++ GP H + + ++P Sbjct: 425 SNHSAGMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQE------HDSEPAPPSKP 475 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 267/419 (63%), Positives = 343/419 (81%) Query: 98 IEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS 157 IEGLMAFFLESTFVGLFFFGW+RL K +H+ T+ VA GSN SALWILVANGWMQNPIAS Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 DFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAK 217 +FNFETMRME+ SFSELVLNPV Q KF+H YV GA+F+LGIS++Y+LKGRD FAK Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQ 277 RSF++ ASFG+ A++SV+++GDESGYE+G Q TKLAA+E E+ETQPAPAA+ F IP+ Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 EEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTD 337 E N+F+I IPYA GIIATRS+D + GLK++ V +E+R+R GM AY LLE+LRSG+ Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 QAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG 397 +A ++ F +++KDLG+GLLLK+YTPNV DATE QIQ+A ++IP V P ++AFR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 FLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 FL+L +I +F +R ++ ++LLR L+G+PLPWIA+E+GWF+AEYGRQPWAI E+L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 P V+NS+LT GDL F++ L+CGLYTLFLV E++LMFK+ RLGPS+LKTGRY+FEQS+ Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQSTK 419 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 152/520 (29%), Positives = 240/520 (46%), Gaps = 68/520 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++L+R+QFA T +H +F L++G+A +A++E ++ +GK YK + FW K+F + Sbjct: 153 SALDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAVA 212 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F +GV +G+ M +QFGTNWS +S + G + G L E + AFFLE+ F+G+ FGW+R+ Sbjct: 213 FGMGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRVS 272 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H T +VA+G+ +S WIL +N WMQ P F ++ + ++ NP Sbjct: 273 PRAHFGATLMVAIGTLISTFWILASNSWMQTPQG--FEIVDGQVVPTDWFAIIFNPSFPY 330 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H + +V A+ + +AW++LKGR K+ F+++ + V+GD+ G Sbjct: 331 RLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQHG 390 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 Q KLAAIE WET+P A LFGIPD + +T ++A+ IP+ +I T S D Sbjct: 391 INTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYAVSIPHLGSLILTHSWDG 450 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GLK Q F S + +G GL Sbjct: 451 EIRGLKSFPPQDRP----------------------NSTVVFWSFRIMVGLGL------- 481 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 M+ AL++ R R+ E KW Sbjct: 482 -----------------------------AMIGL-------AALAWLLRRRGRLYEAKWF 505 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 R AL P ++++ AGW E GRQPW + V+ T+ A S L+ + S++ +Y Sbjct: 506 HRFALAMGPTGFVSLLAGWVTTEVGRQPWVVYGVMRTSHAVSPLSTQQVSVSLMTFVVVY 565 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 L ++ M K R GP+ + + AR Sbjct: 566 FLVFGTGVYYMLKLMRKGPALPGD-TPDDAHDARPERTAR 604 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 160/500 (32%), Positives = 262/500 (52%), Gaps = 55/500 (11%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD + L+R+QFA T ++HF FVP+T+GM FL+AI E++YV +G + YK +TKF+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EFQFG NWS YS +VGD+FG LAIE L+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN---FETMRMEMVSFSELVLN 177 + K H+ WLV++G+ +SA WIL AN +MQ+P+ + + EM+ F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P +F H V GA I GI++W ML+ + +++F ++ + L + V Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + K+AA EA +E A F++ DQ+++ + +++P L +A Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + + G+K L + +E+ + + K + Y Sbjct: 301 DKFEGSLKGMKSLQKEMDEKY-------------------------YPVVGKHIDY---- 331 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 P V +Y++FRIM +L+ + L + Sbjct: 332 ----------------------TPHVPTIYYSFRIMSGSVGILILMALLGTIYSFKRTET 369 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +K+W L+ + + + +A GW +AE GRQP+ I V+ T S + ++FS+++ Sbjct: 370 KKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLFSLLV 429 Query: 478 ICGLYTLFLVAELFLMFKFA 497 C LYT+ + + ++ F++A Sbjct: 430 FCVLYTILGITQ-YIAFRYA 448 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 187/504 (37%), Positives = 269/504 (53%), Gaps = 61/504 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M + V+L+RLQFALT++YH+LFVP TLGM +A +E YV +GK++YK M KFWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+E LMAFFLESTF+G++ FGWDR Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 L K H V VALG+NLSA WILVAN +MQ+P+ F R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H V +G +T + I+ ISAW++L+ F +RS + + G Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALAGHH 238 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + VQ K+AA+EA WETQ PA F+L D + + N A++IP L + S Sbjct: 239 QGQYITKVQPMKMAAMEALWETQ-DPAPFSLVANIDTKAQKNTGALEIPGGLSFLTQNSF 297 Query: 301 -DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 V G+K+L + E + G Sbjct: 298 TSGKVEGIKDLQAKSEAQYGPGNYIP---------------------------------- 323 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 +P + + R+MVA G L+L + + ++++ E Sbjct: 324 -------------------DVPAIFWTF---RVMVAAGSLMLLVAFVGLILNAKDKLVEN 361 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLI 478 + L+ + +PLP+IA GWFVAE GRQPW + + TA S S+TA +++ +++ Sbjct: 362 RTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTTIIGF 421 Query: 479 CGLYTLFLVAELFLMFKFARLGPS 502 +Y + +A ++L + + GP Sbjct: 422 TLVYIVAAIAAIYLAVEHIKKGPD 445 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 168/549 (30%), Positives = 259/549 (47%), Gaps = 84/549 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A L+A+M+T++V++GK + +TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGD+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K+ H+ WLVA+G N SA +I+ AN +MQ+P+ + +N ET R E+ S L+ N A Sbjct: 121 PKLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK--------------GRDFAFAKRSFA----IA 223 F H VA ++T F+ G+ W+M++ + A+ F +A Sbjct: 181 AAFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKHEETARTMFRPVTILA 240 Query: 224 ASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNK 283 +A+ + + + GD G M + Q K+A+ E+ T+ L E+ Sbjct: 241 LWVMVASGIGLAITGDIQGKLMFEQQPMKMASAESLCHTETGADFSILTVGTQNNCESIT 300 Query: 284 FAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQ 343 I+IP +A + D+ V G+ E+ ++EE G Sbjct: 301 QLIKIPGLTSFLADGTFDSTVEGVTEIQARYEEMYGPG---------------------- 338 Query: 344 FNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAI 403 Y PN+ FR M+ + Sbjct: 339 ---------------NYKPNLFVTYW-------------------TFRAMIGWAAGSALL 364 Query: 404 IALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV------- 456 + W R+ +KKW ++ IP P++ AGW E GRQPW + Sbjct: 365 AVVGLWMTRGGRVPDKKWFGWLSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPNPTGVDMI 424 Query: 457 -LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRY--HFEQ 513 L S+ + + S++ +Y V L+ ++ GP ++ Sbjct: 425 RLTVDQGVSNHSPWTVWVSLITFTVVYGALAVVWFTLIRRYTVEGPLEHDAHPPGDDHDE 484 Query: 514 SSTTTQPAR 522 +P + Sbjct: 485 PEEPGKPEQ 493 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 172/518 (33%), Positives = 267/518 (51%), Gaps = 58/518 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + ++R QF +T +YHFLFVP+T+GMAF +AI ET +V + K +Y TKFWGK+F I Sbjct: 1 MDPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLV++G+ LSA +I+ AN +MQ+P+ N + R EM ++ P+ Sbjct: 121 SPRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNM 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H +A ++GA GI++++++K RD + + + L+VIV GD Sbjct: 181 WAYSHVIAGAILSGAAMFAGIASYFLMKKRDVEVFRPAVRFGLVGMLIGSLAVIVTGDLL 240 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 M DVQ K+AA EA W+T A+F+LF I + + F+I++P L +AT S Sbjct: 241 AKVMTDVQPMKMAAAEALWDT-TEGASFSLFTIGTLDGSSEVFSIRVPGVLSFMATESFS 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V G+ ++ Q EE+ G + + + +G Sbjct: 300 GTVEGINDVQAQFEEQYGP-------------GDYRPIIPVAYWMFRIMMG--------- 337 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 GF++L + + W + R+ E K Sbjct: 338 ----------------------------------AGFVMLLVSIVGLWLTRKGRLPESKT 363 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV-ANSSLTAGDLIFSMVLICG 480 + R A++ I P + AGW E GRQPW + + T + S++ G ++ S+++ Sbjct: 364 VWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLIIFTL 423 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 LY + V E+ L+ K+ ++GP S + + + Sbjct: 424 LYGILAVVEVGLVVKYVKIGPPSEQEALASIRRGKPRS 461 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 167/506 (33%), Positives = 275/506 (54%), Gaps = 23/506 (4%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSR+QFALTA YH++FVP ++GMAF++ ++ T+ ++ ++ + KF+ K GI Sbjct: 1 MDPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F LGV TG+ MEF+FG NWS YS +VG IFG PL +EGL AF LESTF+G+ FG DRL Sbjct: 61 FFVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + ++ V +GS+LS LWIL+AN W Q P + + R E+ F V NP+ Sbjct: 121 PRAITWISSFFVFIGSSLSGLWILIANSWQQTPTG--YIIQNGRAELTDFMGAVFNPLLV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV-LGDE 240 ++ HT+ S +TGA + + A+Y+LK R A+ + AI + + + G Sbjct: 179 SQYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVVVLAISAVIQLYPTGHA 238 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + Q TKLAA E ++T+ A +FGI D++ + K AI IP L ++ Sbjct: 239 EGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGDW 297 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V+GL + Y EQ+ + + +D+ ++ + Sbjct: 298 NAEVMGLHD------------AARYVWYEQVLNNPNFASEKDRKEFIET----LMKAHGV 341 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 PN DA E Q+ + ++++P VA +++A+R+M+ G L + I + ++ ++ + + Sbjct: 342 DPNAPDANE-QMVKVLEEALP-VAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGKLYDAR 399 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLIC 479 W L+ + +PLPW+A EAGWF E GR PW + ++ T S ++A ++ +++ Sbjct: 400 WFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLITLIGFV 459 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLK 505 +Y++ L + K R GP ++ Sbjct: 460 VVYSVLFYIWLHFVRKLIREGPEPVE 485 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 170/543 (31%), Positives = 255/543 (46%), Gaps = 87/543 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++++R QF +T +YHFL VPLT+G+ L+A+++T ++ + K Y MTKFWGKLF I Sbjct: 1 MEALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FGAPLA+E L+AFF+ESTF+GL+ FGW +L Sbjct: 61 NFILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ LGS +SA +ILVAN WMQ+P+ R M + N A Sbjct: 121 PAKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVG--VTVVDGRPRMTDAWAVFTNNTAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR------------------------------ 211 V F HT+ F+LGIS +++ K R Sbjct: 179 VAFPHTIFGALAVAGGFLLGISWYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPGR 238 Query: 212 ---DFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAA 268 D RS I A M A + GD G M + Q K+AA EA + + + Sbjct: 239 DKTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNGTSFSV 298 Query: 269 FTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLL 328 ++ + + I+IP L +A T V G+ L+ +++ + + Sbjct: 299 LSIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPEYQAKYGTNL------ 352 Query: 329 EQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYF 388 + +P +A Y+ Sbjct: 353 -----------------------------------PDNPIYGDRAGQPIQYVPVMAVTYW 377 Query: 389 AFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGR 448 FR+M+ G + ++F+ R + E KWL+R A++GI P+ A AGW E GR Sbjct: 378 GFRMMIGFGGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFTELGR 437 Query: 449 QPWAIGE-----------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFA 497 QP+ + + A + ++ G+LIFS+V +Y + L+ E+FL+FK+ Sbjct: 438 QPFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLLFKYV 497 Query: 498 RLG 500 R G Sbjct: 498 RGG 500 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 163/572 (28%), Positives = 256/572 (44%), Gaps = 108/572 (18%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A ++AIM+TV+ ++G + + TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +V D+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WL A+G SA +I+ AN WMQ+P+ +++ E R M F ++ N Sbjct: 121 PRKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA--------------------------- 214 F H +A ++T F+ + W+M + A Sbjct: 181 AAFPHVLAGAWLTAGTFVAAVGIWWMARNTWRAKKLREAIETGDTSGMPKTTSPSQIDAT 240 Query: 215 ----------FAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQP 264 + + M + +++ + GD M Q K+A+ E+ ++ Sbjct: 241 PEDLERDARQLWRPVTRFSLWIIMISGVALFITGDLQAQIMFKQQPMKMASAESLCDSTT 300 Query: 265 APAAFTLFGIPDQEEETN-KFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMK 323 A A F++ I Q N ++IP L +A DTP+ G+ +L VQ++E ++ Sbjct: 301 AGAPFSVLSIGRQNNCDNVDHVVEIPGMLSFLADHRFDTPLQGVNQLQVQYQEALQ---- 356 Query: 324 AYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRV 383 + + + PN+ Sbjct: 357 -------------------------------MPGQNFAPNLFVTY--------------- 370 Query: 384 APLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFV 443 + FR M+ + + W R R+ E + AL IP P++A +GW Sbjct: 371 ----WGFRAMITWALGSVVVALGGLWLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIF 426 Query: 444 AEYGRQPWAIGE-----------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFL 492 E GRQPW + + A S+ TA + +++ LY V L Sbjct: 427 TEMGRQPWVVAPNWQDNLDPTRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFML 486 Query: 493 MFKFARLGPSS-----LKTGRYHFEQSSTTTQ 519 ++ GP++ H + S Q Sbjct: 487 QRRYVIEGPATYDAIPPDEPSAHDDDSDEPKQ 518 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 175/522 (33%), Positives = 263/522 (50%), Gaps = 50/522 (9%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++R QF +T +YHF FVP+T+ ++ L+A+M+TV++ + Y +TKF+GKLF I Sbjct: 1 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFF+ESTFVGL+ FGW++L Sbjct: 61 NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ +L A+G+ +SA++IL AN WMQNP+ + +N T R E+ F ++ NPV + Sbjct: 121 PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYM---LKGR------------DFAFAKRSFAIAASF 226 FVH ++S Y I I+ W++ +GR + + A Sbjct: 181 ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV 240 Query: 227 GMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 + A + V++ GD G M D Q K+AA EA ++ F++ I +++ +A+ Sbjct: 241 LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNTSD---FSVLTIGNKDGSEEVWAL 297 Query: 287 QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 +IP LG + + V G+ EL K S S + N Sbjct: 298 KIPGMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQNVLRQKIDANG 357 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 +K + P V Y+ FRIM+ G + I + Sbjct: 358 IKLE------------------------------PNVPLSYWTFRIMITLGMIGGLIGLV 387 Query: 407 SFWSVIRNRIGE-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS 465 ++ R + WL + LP A+ GW E GRQPW + VLPT A S Sbjct: 388 MLIAMRGGRNPKPHGWLTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTAAVSP 447 Query: 466 -LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKT 506 ++AG ++FS + +Y + V E+ L +K + G L T Sbjct: 448 NVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELST 489 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 162/527 (30%), Positives = 257/527 (48%), Gaps = 72/527 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+R QFA+T +YHF+ VPLT+G+A L+A M+T +V++ + + +TKF+GKL I Sbjct: 1 METLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG WS YS +VGD+FGAPLA+E L AFF+ESTF+GL+ FGWDRL Sbjct: 61 NFALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ WL+A+ +NLSA +IL AN WMQ+P+ + +N T R EM S ++ N Sbjct: 121 SKKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK------GRDFAFAKRSFAIAASFGMAAVL--- 232 F HT+++ ++ F+ GI+ W+M++ A A+ ++ A G +L Sbjct: 181 AAFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSG 240 Query: 233 -SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPY 290 V + GD G M + Q K++A E E++ A + G + + I +P Sbjct: 241 IGVGISGDVQGRLMYEQQPGKMSAAEGLCESEEGAAFSLLTVGPWNPTCDDLTRVISVPG 300 Query: 291 ALGIIATRSVDTP---VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 + T P + G+ ++ + E R +A Sbjct: 301 VASFLGTGHFSGPESALPGVNDVQREMEARFGATDEA----------------------- 337 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 P + Y++FR+M+ A+ + Sbjct: 338 --------------------------GNPISYTPPLGITYWSFRLMIGLAAFSAALALWA 371 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE---------VLP 458 W+ R R + WL R A+ IP P++A GW E GRQPW + +L Sbjct: 372 LWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPNPTGIDQVRLLT 431 Query: 459 TAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 ++++ G ++ S+++ LY V L+ ++A G + Sbjct: 432 ERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYAIEGVPQVH 478 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 153/521 (29%), Positives = 234/521 (44%), Gaps = 69/521 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + ++L+R+QFA T +H +F +T+G+A L ++E +++ +G+++YKD+ +W K+FG+ Sbjct: 4 ISALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKIFGV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGWSRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G H+ T +VALG+ +SA WIL +N WMQ P F + V + ++ NP Sbjct: 124 GPGLHLFSTAMVALGTLISATWILASNSWMQTPQG--FEILDGVVVPVDWWAIIFNPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + VH + ++ A+ + AW++LKG+ + ++A + V+GD Sbjct: 182 YRLVHMGIAAFLATALIVGAAGAWHILKGQKTEATRTMLSMAMWMLVVVAPLQAVVGDLH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q KLAA+E WE LFG+PD E ET +FA+ IP+ +I T S D Sbjct: 242 GLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTHSWD 301 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V LK+ + F S + +G G+L Sbjct: 302 GQVPALKDFPPEDRP----------------------NASIIFWSFRVMVGLGML----- 334 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 M+A G S R + + Sbjct: 335 -------------------------------MIALG-------LWSLCLRYRGSLYSHQG 356 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 LR L+ P IA+ AGWF E GRQPW + ++ TA A S+ L S+ L + Sbjct: 357 FLRMTLWMGPAGVIAILAGWFTTEIGRQPWVVYGIMRTADAVSNHDISSLAASLALFIIV 416 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 Y + + RL P + QP R Sbjct: 417 YFFVFGIGISYLMHLMRL-PVQHRAPEPEGGPGQPR-QPMR 455 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 176/501 (35%), Positives = 260/501 (51%), Gaps = 58/501 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGK--QIYKDMTKFWGKLF 59 +D+VELSR QFA T+++HF FV LT+G+AFL+A+MET + ++Y MT F+G LF Sbjct: 1 MDVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLF 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 INFA+GV TG+ EFQFG NWS YS++VG+IFG PLA+E LMAFFLESTF+GL++FG D Sbjct: 61 LINFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKD 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 RL + WLVA+G+ +SA WI++AN WM +P+ + + + F +V N Sbjct: 121 RLKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVGYEV--VDGQARLTDFGAVVFNYK 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 A + F H S +V F+LGISA+++L+ +D RS I F + +V G Sbjct: 179 AWLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGH 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q K AA+EA+WET +PA ++L + DQE N +++IPY I+A S Sbjct: 239 TEAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 ++ G+ +L Q++E G V + S + + G LL Sbjct: 299 LEGRYEGINQLEEQYDE-------------AYGEGDYVPPVAWVYWSFRIMVAIGSLL-- 343 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 L A + L W R + Sbjct: 344 ---------------------------------------LATAFLGLFLWWRRRQGLDGT 364 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 +W LRA + IPLPWIA GW V E GRQP+ + +L S+ + G+++ +V + Sbjct: 365 RWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVGLW 424 Query: 480 GLYTLFLVAELFLMFKFARLG 500 +Y + +++L+ AR G Sbjct: 425 VVYLALIGLDVYLLTVTARAG 445 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 162/497 (32%), Positives = 254/497 (51%), Gaps = 59/497 (11%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V LSR QFA T +YHFLFVP+T+G+ ++AI++T SG Y+ + F+GKLF INF Sbjct: 6 TVLLSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINF 65 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ EFQFG NWS YS YVG+IFG PLAIEGL+AFF+ESTF+G++ FG DR+ + Sbjct: 66 AIGVVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPR 125 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ WLV++G+ LSA +IL AN WMQ+P+ + T + M +F ++ N + V Sbjct: 126 RVHLASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVT 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDF-AFAKRSFAIAASFGMAAVLSVIVLGDESG 242 HT+ + ++TG+ +LGIS W + + ++ + + L + + G G Sbjct: 186 LFHTLLASFLTGSALVLGISLWQYHRSTETREVFAAGARVSLIVMLISALLMGLDGHIDG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + + Q KLAA EA + T A+ ++ I + ++ F+I IP+ L ++AT + Sbjct: 246 QVIAETQPMKLAAGEALYNTSRG-ASESILTIGNLHDKP-IFSIGIPHVLSLLATDHWNG 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 V G+ +L +++ Q GS V + S + G G Sbjct: 304 VVQGINQLQA-------------AMVRQYGPGSYIPPVALDYWSFRIMAGIGA------- 343 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 +++ I W + +R+ + +W Sbjct: 344 ------------------------------------VIILIALWGGWLLYHHRLEQSRWF 367 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 + AL+ IPLP+IA GW E GRQPW + +L T+ S L+ + ++V LY Sbjct: 368 AKVALWTIPLPFIANTTGWIYTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTVLY 427 Query: 483 TLFLVAELFLMFKFARL 499 + V ++ LM ++ R Sbjct: 428 GILAVVDISLMVRYGRR 444 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 410 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 154/515 (29%), Positives = 244/515 (47%), Gaps = 71/515 (13%) Query: 7 LSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 LSR+QFA T +H LF ++G++ L I E +++++ Y + KFW K+F + F +G Sbjct: 7 LSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFALTFGMG 66 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 V +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R+ K H Sbjct: 67 VVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGRINKYVH 126 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + + G LSA WIL AN WMQ P N+ + E+ S+ ++ NP +++H Sbjct: 127 FLANFTIFAGVTLSAFWILSANSWMQTPDG--VNYINGKFEVYSWYHVIFNPSVIPRYIH 184 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 + + Y++ M ILG+SA+Y++K + +FAK + + + + +GD+ G E+ Sbjct: 185 MLMAAYLSTLMVILGVSAYYIIKDKHHSFAKTCIKFSIVSILILSVGQLAVGDDVGREVH 244 Query: 247 DVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIG 306 + Q K AAIE W+TQ A F +F P + +E N F+I+IP +I T +D +IG Sbjct: 245 EHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHELDGELIG 303 Query: 307 LKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVAD 366 LK + + V F S + +G G L+ Sbjct: 304 LKSVPEKDRP----------------------VVAVVFYSFRIMVGIGTLMI-------- 333 Query: 367 ATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAA 426 +M G +LLA R ++ KW LR Sbjct: 334 -------------------------LMGVVGTILLA----------RKKLQTSKWFLRLC 358 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 PL ++A+ GWF AE+GRQPW + +L T + S + + S+ I +Y + Sbjct: 359 TLTTPLGFVAIITGWFTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIIIVYFVIF 418 Query: 487 VAELF-LMFKFARLGPSSLKTGR--YHFEQSSTTT 518 F +F+ GPS+ R Y + QS T Sbjct: 419 GFFYFRYLFRIINGGPSTGGEERMPYSYFQSVEKT 453 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 410 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 165/532 (31%), Positives = 254/532 (47%), Gaps = 43/532 (8%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QF +T +YHF+FVPLT+G+A L+A+M+T + ++ K + T+F+G + + Sbjct: 16 LDTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLV 75 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS VGD+FG PLA+EGL+AFF+ES F+G++ FGW R+ Sbjct: 76 NFAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRI 135 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W VAL NLSA +I+VAN +MQ+P+ ++FN ET R E+ L+ NP A Sbjct: 136 PTWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTAL 195 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H VA ++T F+LG+S W+++K A AK A G+A D + Sbjct: 196 AAFPHAVAGSFLTAGTFVLGVSGWWLIKD---ARAKAKTATTTQDGLAL--------DNA 244 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEET-NKFAIQIPYALGIIATRSV 300 T AA + AP++ D + + ++ A+++ I+++ V Sbjct: 245 PAAEASASGTNTAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGV 304 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGS-------TDQAVRDQFNSMKKD--- 350 + G + + ++ A SL S T + +K Sbjct: 305 --FITGDIQAKLMFVQQPMKMASAESLCHTETDPSFSILTIGTHNNCESVIHVLKAPFVL 362 Query: 351 --LGYGLLLKRYTPNVADATE-AQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 L G V D E A+ + P + Y++FR M+ LA+ + Sbjct: 363 PFLAEGKFSGVTLQGVMDLQEKAEALYGPGNYSPNLFVTYWSFRAMIGLMVGSLALAFFA 422 Query: 408 FWSVIRNRIGEKKW---LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV-------- 456 + + R+ + KW L IP P++A +GW E GRQPW I Sbjct: 423 WLFTRKGRLPKGKWATIFSWGCLAAIPFPFLANSSGWIFTEMGRQPWVIHPNPESVGDPR 482 Query: 457 -----LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 + S +I ++V +Y + V +L+ + GP + Sbjct: 483 TESIRMLVDHGGSGHEPWVVIVTLVGFTLIYGILAVVWFWLIRRVVLDGPPA 534 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 161/524 (30%), Positives = 256/524 (48%), Gaps = 68/524 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I L+R QFA+T ++HF FVP T+G F++AIMET+YV++ + YK MTKFWG + + Sbjct: 1 MTIETLARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD-- 119 +FA+GV TG+ EFQFG NWS YS +VGDIFGAPLAIE L+AFF+ESTF+GL+ F WD Sbjct: 61 SFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNK 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 ++ K H+ WLV GS +SA+WIL+AN +MQ+P+ + R +M F L+ N Sbjct: 121 KISKKLHVTFIWLVVFGSLMSAMWILIANSFMQHPVGYEV--VNGRAQMTDFFALINNHQ 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF-----AKRSFAIAASFGMAAVLSV 234 + +F H + G + I G+SA+ +LK + K+S + + +SV Sbjct: 179 FRYEFGHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISV 238 Query: 235 IVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGI 294 + +GD + + Q K AA+E ++E PAA+T+ ++ ++ F I+IPY L I Sbjct: 239 MGVGDLQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSI 298 Query: 295 IATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYG 354 ++ V G+ + + +D + M L YG Sbjct: 299 LSYGKPSGSVKGMDTANKELVAKYG---------------------QDNYFPMVNLLFYG 337 Query: 355 LLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRN 414 FR M A G ++L + AL + Sbjct: 338 -----------------------------------FRTMAAFGTMMLGVSALGLFLTRPK 362 Query: 415 R--IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDL 471 + + + KW+L P+++ GW + E GR PW + + + S ++ L Sbjct: 363 KPILYDHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVSVASL 422 Query: 472 IFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 +FS + L++ ++L+ + + GP + +SS Sbjct: 423 LFSNTVYFLLFSCLGAMMVYLVIRELQKGPEHEEVLLQGLAKSS 466 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 160/521 (30%), Positives = 259/521 (49%), Gaps = 63/521 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V+++R QF +T +YHFL VPLT+G+ L+A+M T++V +GK + MT+FWG+++ I Sbjct: 6 IDVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLI 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FG+ LA+E L+AFFLESTF+GL+ FGW R+ Sbjct: 66 NFVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRI 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GS +SA +I+ AN WMQ+P+ + + T R V F ++ N A Sbjct: 126 PKELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTAL 185 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR---------DFAFAKRSFAIAASFGMAAVL 232 F H V + + ++GI W++ + D A +RS + +AA + Sbjct: 186 AAFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFV 245 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP--DQEEETNKFAIQIPY 290 V + GD G M + Q K+++ EA ET+ APA F++ E + +I IP Sbjct: 246 LVALTGDWQGKLMYEQQPLKMSSAEALCETE-APAPFSVLAWSKLGSNECDDVHSITIPG 304 Query: 291 ALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKD 350 + +A + V G+ +L ++ G T +F ++ + Sbjct: 305 LVSFLAHGDFSSAVPGVNQLQEEYAAVY---------------GETYPDDPSRFGALAGE 349 Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 D P +A Y++FR+M+ G + + A + W+ Sbjct: 350 -------------------------EIDYTPLLAVSYWSFRLMIGMGAVSAGVAAYALWA 384 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE-----------VLPT 459 + R+ + + +L + P++A GW E GRQP+ + Sbjct: 385 TRKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQTYFFTA 444 Query: 460 AVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLG 500 + +TA ++ S+ L+ +Y V EL+L+ +F R G Sbjct: 445 QAVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRG 485 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 166/551 (30%), Positives = 270/551 (49%), Gaps = 70/551 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 +LD ++L+R QF +T +YHF+ VP T+GM+ L+A+MET++ +GK+ + T+F+GKLF Sbjct: 8 LLDSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFL 67 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFALGVATG+ EFQFG WS YS +VGDIFGAPLA E L++FF+ESTF+G++ FGW + Sbjct: 68 VNFALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGK 127 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMV---SFSELVLN 177 + K H+ V WLV G N S LWI+ AN WMQ P+ + FN ET R E+ +F +V N Sbjct: 128 ISKKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTN 187 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKG---------RDFAFAKRSFAIAASFGM 228 + +H V S + A + GIS W+M++ + + + Sbjct: 188 STMWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIML 247 Query: 229 AAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFG-IPDQ-------EEE 280 AA L + G G + Q K+AA E + A F PD E Sbjct: 248 AAGLLTVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGENS 307 Query: 281 TNKFAIQ------IPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG 334 +K+ + IP LG +A S + G+ + + + + N K + Sbjct: 308 GSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF--------- 358 Query: 335 STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV 394 +D+ ++ GL R +VA + A+ P V P++++FR+M+ Sbjct: 359 ------KDKAPNIDTTNTSGL---RGKGDVAGYSWAK-------YAPSVLPVFWSFRLMM 402 Query: 395 ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 G + A+ L + R+ + L AL +P+P++ V GW + E GRQP+ + Sbjct: 403 GVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFIVY 462 Query: 455 E-------------------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFK 495 +L + ++ + + S+V+ LY + + L+ + Sbjct: 463 PNQDAFNADMTVQNAGAGVYMLTGDGLSGVVSPVEFLISLVVFTLLYLVLGIIWFKLLVR 522 Query: 496 FARLGPSSLKT 506 +++ G ++ + Sbjct: 523 YSKEGINTPAS 533 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 157/541 (29%), Positives = 258/541 (47%), Gaps = 78/541 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++++R QF +T +YHF+FVPLT+G+A L+A+M+T + ++GK+ + T+F+G + I Sbjct: 1 MDVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+EGL+AFFLES F+GL+ FGW ++ Sbjct: 61 NFAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W+VA+ +N+SA +I+VAN +MQ+P+ + +N ET R E+ L+ NP A Sbjct: 121 PGWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFG----MAAVLSVIVL 237 F H VA +T F++GI W++++ + F A G + A+++V V Sbjct: 181 AAFPHAVAGSLLTAGTFVVGICGWWLIRASKQESHR-MFRPALWMGWWTTVIALIAVAVT 239 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD M Q K+A+ E+ T+ P L + ++ I++P+ L +A Sbjct: 240 GDIQAKLMFQQQPMKMASAESLCHTETDPNFSILTIGTHNDCDSVIHLIEMPWVLPFLAE 299 Query: 298 RSVDTP-VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + G+++L + E G A +L + S + +G Sbjct: 300 GRFTGVTLEGVQDLQAKAESLYGPGNYAPNLFVT-------------YWSFRAMIG---- 342 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 +MV LAI +S+ + + R Sbjct: 343 -----------------------------------LMVGS----LAIAFISWLLLRKGRT 363 Query: 417 GE---KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV-------------LPTA 460 +W +L IP+P++A AGW E GRQPW + + Sbjct: 364 PTGRIARWFAWGSLAVIPMPFLANSAGWIFTEMGRQPWVVHPNPESVGDPRTEMIRMTVD 423 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 + S + +++ LY + V +L+ + +GP QS+ Sbjct: 424 MGVSDHAPWVVWVTLIGFTLLYFILFVIWFWLIRRAVLIGPPHESGPVGDASQSNQPGPS 483 Query: 521 A 521 A Sbjct: 484 A 484 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 156/527 (29%), Positives = 257/527 (48%), Gaps = 74/527 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ EL+R QF +T +YHF VPLT+G++ L+A+M+T SG ++ T F+GK+ I Sbjct: 1 MEAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFFLESTF+GL+ FG +RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVS---FSELVLNP 178 H WL+A+G+ LS +IL AN +MQNP + N +T R+E+ F ++ + Sbjct: 121 SPRLHNMCIWLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFSE 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDF----AFAKRSFAIAASFGMAAVLSV 234 + F HT+++ ++ + G+ W+M + R A++ + AA G+ A+L Sbjct: 181 TSLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLVS 240 Query: 235 IVLGDESGYEMGDV----QKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPY 290 + SG+ MG Q K AA+ E+ + + + + + + + P Sbjct: 241 SCIAIGSGHFMGQHVKDIQPAKAAAMMGVCESGESHD--LVIAMWTSDCDGPQLTLPFPG 298 Query: 291 AL-GIIATRSVDT---PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 L +AT + GL ++ + + + Sbjct: 299 GLESFMATNHFSGKESFLKGLDDVNAELKAKY---------------------------- 330 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 A + + +D P + +++FR M+ GFL LA+ Sbjct: 331 -----------------------ADVYGSDQDYRPNLTVAFWSFRAMMGIGFLGLAMSIF 367 Query: 407 SFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE------VLPTA 460 +S+ ++I + + + R L IPLP++ GW + E GRQPW + ++ Sbjct: 368 GLYSLRGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQ 427 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 ++S++ G ++ SM + LY+ V + L+ ++A G + K Sbjct: 428 GLSNSVSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEGIDTRKKA 474 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 155/499 (31%), Positives = 239/499 (47%), Gaps = 59/499 (11%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++LSR QFA T+++H+ FVP T+G A ++AI++T+ +G +++T+F+G LF IN Sbjct: 8 SALDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG+ EFQFG NW +S++VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 68 FAVGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKIP 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + W+VALG+ +SA WI++AN WMQ+P+ F + R M +V NP Sbjct: 128 AWLSLASIWIVALGTTVSAFWIIIANAWMQHPVG--FEIKNGRAVMTDAWAIVTNPKGLE 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 F H A GA F+L +SA+++ + + + SF +A + VI G G Sbjct: 186 WFAHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 Q K AA A WET +L +P N+F I +PY +A + Sbjct: 246 QSAVRDQPMKYAAFSALWETPAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNFT 305 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 GL EL ++E R G+ V + + + +G G L+ Sbjct: 306 GKAKGLNELQAEYEARYGP-------------GNYIPFVWPVYWAFRVMVGLGFLM---- 348 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 LL+A+ + W + ++ + Sbjct: 349 -------------------------------------LLVAL--VYVWRWRQGKLDDPGR 369 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L L P +A GW E GRQPW + +L T A S+L ++ S+V + Sbjct: 370 LYPLLLAMPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWVV 429 Query: 482 YTLFLVAELFLMFKFARLG 500 Y + ++FL+ + AR G Sbjct: 430 YLTLIGLDVFLLTRTARAG 448 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 148/522 (28%), Positives = 234/522 (44%), Gaps = 69/522 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 L+ ++L+R+QFA T +H LF +T+G+A LA++E +++ + +Y+D+ FW K+F + Sbjct: 4 LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW+R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H T +VA+G+ +S WIL +N WMQ P F R+ + +V NP Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQG--FEIIDGRVIPTDWFAVVFNPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H + +V A F+ +AW++L+GRD ++ ++A + V+GD Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPA-PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G Q K+AAIE WE P LFGIPD +EE K+A++IPY +I T S+ Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSL 301 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 D V LKE + ++ ++ L + + + L Sbjct: 302 DKQVPALKEFKPEDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTL--------- 352 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 +S P + + M G + + Sbjct: 353 ----------------YNSRPFLYLALW----MGPSGLIAIL------------------ 374 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 W E G RQPW + ++ TA A+S + + ++VL Sbjct: 375 -----------AGWFTTEIG-------RQPWVVYGLMRTADASSGHSVAQMSITLVLFVV 416 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 +Y + L M + R GP + H T PAR Sbjct: 417 VYFVLFGTGLGYMMRLVRKGPKAYVEHVPHGGPGQQRT-PAR 457 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 168/513 (32%), Positives = 257/513 (50%), Gaps = 65/513 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYK----DMTKFWGK 57 +D + LSR QFA+T +YHFLFVP+TLG++ +A++ET YV + + +K + +F+G Sbjct: 1 MDALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+E L AFFLESTF+G++ FG Sbjct: 61 LFVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WD+L + H W+VA SNLSA WILVAN +MQ+P+ F R EM F LV N Sbjct: 121 WDKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVG--FAVRNGRAEMTDFFALVTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIV 236 P ++ HT+ S T ++ +SAW +L ++ A F + + + + Sbjct: 179 PYVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMG 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 G + V KL+++EA WET+ PA F + D++ N F + +P A + Sbjct: 239 SGHLQAQYIAQVNPMKLSSVEALWETE-DPAPFAIVADIDEDMHKNNFELTVPGAFSFML 297 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + V G+ ++ + E+ Sbjct: 298 YNTPTGAVPGINQIQKDYSEKYGP------------------------------------ 321 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 Y P+V L+++FRIM+ G L++ + + + NR Sbjct: 322 -DEYRPDVTG-------------------LFWSFRIMIGLGGLMILLGLAAAYFGFTNRP 361 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSM 475 L+ + +PLP++A GW+VAE GRQPW + + T+ A S LT D+ +M Sbjct: 362 LACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVWLTM 421 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 LY + +A L++ +F + S + GR Sbjct: 422 AGFTVLYLVLAIAALWIAMRFIKKTQISFEEGR 454 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 168/508 (33%), Positives = 271/508 (53%), Gaps = 10/508 (1%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL-FGIN 62 + + +RL+FAL+ M H +FVPL +G+ + AI ET+YV YK +F GKL I Sbjct: 6 LTDSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIV 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM---AFFLESTFVGLFFFGWD 119 F L + LT +W ++ +F + + G + L T V LF+ GW Sbjct: 66 FVLIITGILTPPMP--EDWQQLDIFINSVFSEYVGLLGTIVSTGMMLWLTAVSLFYVGWR 123 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS-DFNFETMRMEMVSFSELVLNP 178 L H+ +TWL+ + L ++V NGWM +P ++ F+ TM + S E+V P Sbjct: 124 YLPAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIVSTP 183 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 +A +F H ++ G + ++ +S +Y+ K R AFA+ I AS G+ L I G Sbjct: 184 MASTRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAIFSG 243 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D G ++ Q KLA +EA W+TQ A LF +PDQ+ E N+F ++IP LG + + Sbjct: 244 DIHGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWMLSG 303 Query: 299 SVDT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + DT PV G+K+L ++ +RIRNG+ A+ + S S QA R+ + ++DLGY L+ Sbjct: 304 TDDTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYAELV 363 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++Y P++ + TE QI+ A D++ V L+F+FR+MV G +L + + + I+ R+ Sbjct: 364 RKYNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKGRVN 423 Query: 418 E-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDL-IFSM 475 LL+ + Y +P+P+IA +GW ++EYGRQPW I V+PT S G F + Sbjct: 424 SVSTRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQTNGFQL 483 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSS 503 + Y + ++ ++ + GP Sbjct: 484 PTLLMSYAALFLILGVILARWIKQGPKP 511 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 158/508 (31%), Positives = 248/508 (48%), Gaps = 60/508 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I+ L+R QFA+T +YHF FVP ++G AF++AIME++YV + + YK M KFWG +F + Sbjct: 1 MTILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TGL EFQFG NWS YS ++GDIFGAPLA+E L++FF+ESTF+GL+ F W ++ Sbjct: 61 SFAVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ + GS SALWIL AN +MQ+P+ + + R MV+F L+ NP Sbjct: 121 KPGLHLFFIWMTSFGSLTSALWILTANSFMQHPVGYEI--KGGRAVMVNFGALLKNPQLW 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-----DFAFAKRSFAIAASFGMAAVLSVIV 236 +F H + + + G + I G++A+ +LK + + F K+S + + + I Sbjct: 179 YEFGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIA 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 LGD + Q K AA E + T A +T+ GI D ++ K I IPYAL I++ Sbjct: 239 LGDAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILS 298 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 V G+ EL Q++++ + Y + L + + +G + Sbjct: 299 YHKTTGAVTGMNELNAQYKKKYGKNLDYYPPVNTLFYSFRIMCAVGAWIFLVSLVGLIMT 358 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 ++ +A + W Sbjct: 359 REKSKKPLAQRR-------------------------------------WALW------- 374 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSM 475 LP+I AGWFV E+GR PW + + A + S ++ G L+ S Sbjct: 375 --------CIAITTFLPFIGNTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLLTSN 426 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSS 503 ++ L+T + ++L+ R PS Sbjct: 427 IVYFVLFTTLAITLIWLIVLELRKDPSE 454 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 176/514 (34%), Positives = 252/514 (49%), Gaps = 69/514 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V L+RLQFA TA YHF+FVPLT+G+ +LAI ET Y S TKFW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA E L+AFFLESTF+G+ FG R+ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 +M WLV GS LSALWIL+AN WMQ P ++ + + + + F +NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 ++ HT+ + + GA + +SAWY++K R FA ++ + A G+ ++V S Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + + Q TKLA +E ++++ FG D+E + IP +AT + DT Sbjct: 246 VTVAEEQPTKLAMMEGMYDSE--VPPLYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 GL +L E YG L P Sbjct: 304 EYEGLNQLAASAE-------------------------------------YGALDPETAP 326 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC-GFLLLAIIALSFWSVIRNRIGEKKW 421 V ++ + +MVA G ++L +I +++ +I KW Sbjct: 327 --------------------VNFVFQTYHLMVAMYGLIMLTVILALVFTLRGGKIQNMKW 366 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE---------VLPTAVANSSLTAGDLI 472 L R L P IA++AGWF AE GRQPW + +L + S++A +L+ Sbjct: 367 LQRLVLISPVFPLIAIQAGWFTAEVGRQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELV 426 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGPSSLKT 506 +MVL +Y +VA M +F + GP + Sbjct: 427 ITMVLFLVVYAFLMVAWARTMGRFIKEGPVAEHE 460 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 162/507 (31%), Positives = 247/507 (48%), Gaps = 65/507 (12%) Query: 20 FLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGT 79 L+ LT GMA L ++E +++ + Y +FW KL+ +NF +GVA+GL M FQFG Sbjct: 1 MLWPVLTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGL 60 Query: 80 NWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNL 139 NW+ +S VGD FG L EG MAF LE++F+G+ FGWDR+ V H T LVA G+NL Sbjct: 61 NWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANL 120 Query: 140 SALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFI 199 S WIL AN W+Q P +F + + + + + NP F+HT + T I Sbjct: 121 STFWILSANSWLQTPAGGEF--IAGKFVVQDYFQAIANPFMVNSFLHTFFATLETSLFVI 178 Query: 200 LGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAE 259 GISAWY++ R F RSF + + + + +G S ++ Q KLAA+EA+ Sbjct: 179 GGISAWYIINQRRTEFFLRSFKVILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQ 238 Query: 260 WETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGII--ATRSVDTPVIGLKELMVQHE 315 WET PA PA ++L +P+ + E N++ I++P AL + +D PV GLKE ++ Sbjct: 239 WETVPAGEPADWSLLAVPNNKVEKNEWEIKVPGALSYLLELKSKLDQPVKGLKEWEPKNR 298 Query: 316 ERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQA 375 ++ + + S + +G GL L Sbjct: 299 PQMVGLI---------------------YYSFRIMVGIGLFL------------------ 319 Query: 376 TKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWI 435 G +L+ +I + I ++KWL+RA ++ PL +I Sbjct: 320 --------------------AGLMLITVIQWLSGKLSTTTITQQKWLMRAWIFAGPLGYI 359 Query: 436 AVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFK 495 AVE GW V GRQPW + L T A S + G+++FS+V + +Y +F VA L+ + Sbjct: 360 AVETGWIVRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGSR 419 Query: 496 FARLGPSSLKTGRYHFEQSSTTTQPAR 522 R GP+ + + +PA+ Sbjct: 420 IIRKGPNLELPAPRTIIKPAIDIEPAQ 446 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 69/500 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H +F T+G+A +A ET++ + I++ ++KFW ++F + Sbjct: 3 LDPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAV 62 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV +G+ M FQFGTNWS +S+ + G L+ E + AFFLE+ F+G+ FG D++ Sbjct: 63 VFGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKV 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ +VA G+ +S+ WIL AN MQ P + S+++ + P Sbjct: 123 PQGVHLFAAIMVATGTFISSFWILAANSLMQTPQG--LELINGMYYVTSWADSLFTPSFG 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F H + ++T ++ + G+SAW++L+ R+ K++ +IA F + V+GD Sbjct: 181 YRFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWFLLVLAPLQAVVGDFH 240 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q K+AA+E WET + LF IPD+E + N F + IP + T D Sbjct: 241 GLNTLKHQPMKVAAMEGNWET-SSQVPLLLFAIPDKESQKNHFEVAIPGLASYVLTHDWD 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL E+ ++ + + F S + +G GLL Sbjct: 300 GVVPGLNEVPIEEQPPVFI----------------------VFWSFRIMVGLGLL----- 332 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 M+A G + RI Sbjct: 333 -------------------------------MIAFG-------VWGLVLRRKGRIYHNNI 354 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICG 480 L + P+IAV AGW V E GR PW I + A SLT G +F+++ Sbjct: 355 FLNGLRFMSLSPFIAVLAGWVVTETGRAPWLIYGQMTHAQGLTPSLTGGMALFTLIGYIV 414 Query: 481 LYTLFLVAELFLMFKFARLG 500 +Y+ A ++ + + + G Sbjct: 415 VYSCVFSAGVYYLLQVFKGG 434 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 146/529 (27%), Positives = 232/529 (43%), Gaps = 70/529 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD V SR+QFALT + H +F +++G+A L + S +Y+ + +FW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+EG+MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRM--EMVSFSELVLNP 178 + + + V LG+ LSA+WIL+AN WMQ P + E + +V LNP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-------DFAFAKRSFAIAASFGMAAV 231 FVH + + A+ + GI+A+Y+ + + F +++ IA + Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 232 LSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYA 291 + GD + + Q K AA+EA WET + P ++ Sbjct: 241 PLQAIHGDLYARHIVETQPQKFAAMEAIWETDSY-VPEYIVAFPTSIQD----------- 288 Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 ++ + G L SG QA N + Sbjct: 289 -------------------LLDLRAKEIFGFGIPGGASWLASGGDPQATIQGLNEFEGP- 328 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 P VA ++++FRIMVA GF + + + Sbjct: 329 ----------------------------QPPVAIVFWSFRIMVALGFWFILLAFWGVYRW 360 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGD 470 R + E L +A + PL +AVE GW V E GRQPW I V+ T+ + S LT + Sbjct: 361 WRGELYEDDLLHKALMLSAPLGLVAVELGWIVTEVGRQPWVIQGVMKTSDSVSPGLTGAE 420 Query: 471 LIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 ++V +Y L +++ + R GP S ++ Sbjct: 421 ATATLVGFAIVYLCLLTLYTYVIVRIIRAGPPDGDELTTTESSSPPQSE 469 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 150/504 (29%), Positives = 221/504 (43%), Gaps = 64/504 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + D V LSRLQFALT +H F L++G+ L I+E +++ +G Y +FW F Sbjct: 4 LTDPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFA 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ TG+ +EFQFGTNW +S +G+ FG L EG MAF LE+ F + FGW R Sbjct: 64 INFAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKR 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G H T +VA ++LSA WIL AN WMQ P + E + + + +P Sbjct: 124 VGPKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGG--HIENGVFIVDDYLAAIFSPDL 181 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F+H + + +S +++ G++ AF +SF IAA + ++GD+ Sbjct: 182 PFAFLHMHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGDQ 241 Query: 241 SGYEMGDVQKTKLAAIEAEWETQP--APAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 +G E+ +Q K+A IEA WET P A + L PD E E N F+I+IPY L ++ T Sbjct: 242 NGLEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVTH 301 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 S V GLKE + I ++ + + A+ + K L Sbjct: 302 SPTGTVPGLKEFPKEDRPPIIIPFYSFRFMVGIGFAMVGVALWTVWEWRKGGL------- 354 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 + FR Sbjct: 355 --------------------RPENAPGRVWLFR--------------------------- 367 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 A ++AV GW E GRQPW + ++ TA +S+LT G L S+ Sbjct: 368 ------AWGAMALGGYLAVILGWITREVGRQPWMLYGLIRTADGHSNLTVGQLWTSLAGF 421 Query: 479 CGLYTLFLVAELFLMFKFARLGPS 502 YT+ + M K + GP Sbjct: 422 VVAYTILGCVFVIFMAKLFKKGPD 445 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 167/544 (30%), Positives = 252/544 (46%), Gaps = 95/544 (17%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+R QF +T +YHFLFVPLT+G+ +A ++T + +GK+ Y +TKF+GKLF I Sbjct: 1 MDALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GSNLSA +IL AN WM++P+ + + M ++ N A Sbjct: 121 PKRVHLATIWAAVIGSNLSAYFILAANAWMKHPVGYEV--VDGKARMTDLWAVLTNSSAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD-------------FAFAKRSFAIAASFGM 228 + H V + +V F+L + +++L+ R + A Sbjct: 179 AQVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTA 238 Query: 229 AAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQI 288 A + V GD S + + Q KLAA E A A F+ +++ Sbjct: 239 IAGVVVAGSGDMSAKLLYEQQPMKLAAAEGLRH-DTAGAPFSPV-----------PGVEV 286 Query: 289 PYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMK 348 P L +AT V G ++L + E+ G Sbjct: 287 PMLLSFLATNDPSAVVHGTEDLQARFEKEFGPG--------------------------- 319 Query: 349 KDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSF 408 Y PN+ +FR+M+ G +A+ L Sbjct: 320 ----------DYRPNLPVVFW-------------------SFRVMITFGMATVALSVLGL 350 Query: 409 WSVIRNRIGEK------KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA 462 W + R + WL RA + +PLP IA+ +GW ++E GRQPW + L TA + Sbjct: 351 WLTRKRRRDPRPPRELPTWLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAAS 410 Query: 463 NSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG-----RYHFEQSST 516 S ++ ++ S+ + LY + +AE L+ + + GP G E S+ Sbjct: 411 VSPGVSLTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPEPAAPGPLTPPSRDDEDSAA 470 Query: 517 TTQP 520 QP Sbjct: 471 RLQP 474 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 162/506 (32%), Positives = 236/506 (46%), Gaps = 65/506 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QFALTA++H L+ LT GM+ L ++E +++ + Y +FW KL+ + Sbjct: 6 LDTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYIL 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GVA+GL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ Sbjct: 66 NFGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRV 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 V H T VA G+NLS WIL AN W+Q P F + + + + + NP Sbjct: 126 PPVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVF--VEGKFRVQDYFQAIANPFMV 183 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H + T I GISAWY+L+ R F +S + + + +G S Sbjct: 184 KSFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMALVIAPLQVFVGHLS 243 Query: 242 GYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 ++ Q KLAA+EA WET PA PA +++ +P++ ETN F ++IP L + Sbjct: 244 AEQVYHYQPAKLAAMEALWETVPAGTPADWSVIALPNEAAETNTFEVKIPALLSYLLALR 303 Query: 300 V--DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 DTP++GLKE + + + S + + GL L Sbjct: 304 PKLDTPILGLKEWAPSDRPHLVGLI---------------------YYSFRLMVAIGLYL 342 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 A + + + + R R Sbjct: 343 A------------------------------------ALAIVTIFVWWRTGLEGDRLRNY 366 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 + W ++ PL ++AVEAGW V GRQPW + L TA A S L ++FS+ Sbjct: 367 QWLW--WGWIFAGPLGYLAVEAGWIVRCVGRQPWIVYGQLRTAEAASDLPPQVVLFSLSG 424 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSS 503 + LYT+F A LF + + GP+ Sbjct: 425 LVALYTIFFFAALFFGSRIIQKGPNV 450 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 145/497 (29%), Positives = 220/497 (44%), Gaps = 70/497 (14%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + LSR+QFAL +H LF +T+ + ++L + + LS I+ +FW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG +R+ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H T +VA+G+ LSA WIL N WM P F S+ +++ NP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTPAG--FEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H + + +T + + G+SA+ +LKG K + A I +GD G Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGDTKRAPKLALHTAIVLAGILAPLQIFVGDLHG 262 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + Q K++AIE W T+ A LF +P+++ + N +A+ IP +I T Sbjct: 263 LNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTHDAQG 321 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GL H V F S + + G+L+ Sbjct: 322 EIKGLDTFDGNHPP-----------------------VAPVFWSFRIMVATGMLM----- 353 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 +A A A K PR+ + MV F Sbjct: 354 -LASAWLGCFYLARKKPFPRLYL-----KAMVGLTF------------------------ 383 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 W+A AGW+V E GRQPW + +L T A ++L AG++ FS+ + Y Sbjct: 384 ---------SGWVATLAGWYVTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVYAVTY 434 Query: 483 TLFLVAELFLMFKFARL 499 + L+A + + A Sbjct: 435 AVLLLAYIHTLKVMANK 451 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 380 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 132/525 (25%), Positives = 226/525 (43%), Gaps = 69/525 (13%) Query: 1 MLD---IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGK 57 MLD L+R+QFA T +H +F ++G+A LA++ +++ + Q Y + +W K Sbjct: 39 MLDSFSAETLARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKK 98 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 +F + F +GV +G+ M +QFGTNWS +S G + G +A E L AFFLE+ F+G+ FG Sbjct: 99 IFAVAFGMGVVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFG 158 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 +R+G+ HM T +VA G+ +SA WIL N WMQ P E + + ++V N Sbjct: 159 RERVGEKLHMFATAMVAFGTLMSATWILSVNSWMQTPAGFSIA-ENGQFIPEDWWQIVFN 217 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P + VH V + ++T ++ + + A ++L+ R A+R F++A I Sbjct: 218 PSFPYRLVHMVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMAMWMAAIVTPLQIYA 277 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD G + Q K+ A+E +E+ P A LFGI +Q E +A++IP +I Sbjct: 278 GDMHGLNTLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILK 337 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 S++ P+ GL + E + ++ ++ L + + + L Sbjct: 338 HSLNAPLDGLDTIPDDEEPPVAIVFYSFRVMVGLGFAMLGLGLWSLWARYRGTLF----- 392 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 L+ A +M GF+ + Sbjct: 393 ------------------------TTPWLHRAAILMGPTGFIAVL--------------- 413 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 WI E G RQP+ + +L T+ + + + A + S+V Sbjct: 414 --------------AGWITTEVG-------RQPYTVYGLLRTSDSLAPVAAPAVATSLVA 452 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 +Y A + + K P++ + G + PA+ Sbjct: 453 FIIVYFFVFGAGTYYLLKMMNKRPATPRLGLRDGPIRTAGITPAQ 497 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 161/500 (32%), Positives = 247/500 (49%), Gaps = 64/500 (12%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R QFA+ ++HF FVP+T+G+ L+A++ T+ ++ +T+F+ +F I+ Sbjct: 2 ALFLARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISM 61 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ +EFQFG NWS YS +VG+IFGAPLAIEGL+AFFLESTF+GL+ FG DRL Sbjct: 62 AVGVVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPP 121 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ WLV++G+ LSA +IL AN WMQ+P+ + E + + +F ++ N Sbjct: 122 RVHLATIWLVSIGTLLSAFFILAANAWMQHPVG--YRVENGKAVLTNFWAVLGNSTLWWS 179 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFA----IAASFGMAAVLSVIVLGD 239 F HTV + TG +LGI+ + + D ++ +F +AA AA + V GD Sbjct: 180 FAHTVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTAVSGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 M Q K+AA EA ++T A+F+L I D F I++P L +IAT + Sbjct: 240 GQARLMDTQQPMKMAAAEALYDTTRG-ASFSLLTIGDLSGNP-IFQIRVPGLLSLIATLN 297 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V+G+ ++ + R SGS + + S + +G Sbjct: 298 PEGEVLGIHQIQQAEQARYG-------------SGSYVPVIWLTYWSFRIMVG------- 337 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 G LL+ + W + R E Sbjct: 338 ------------------------------------AGILLVLLPLWILWRMRRRTGFEG 361 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 +WL R AL GI LP +A AGW E GRQPW + ++ TA S++ D+ ++ Sbjct: 362 RWLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSFV 421 Query: 480 GLYTLFLVAELFLMFKFARL 499 +YT+ L+ + AR Sbjct: 422 AVYTILGFIAAVLIARAARR 441 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 218/498 (43%), Gaps = 50/498 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H LF +T+ + ++L + + + +M +FW K+F + Sbjct: 4 LDTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFAL 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 64 SFAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 HM T LVA G+ +SA WI+V N WM P F + ++ NP Sbjct: 124 PGWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQG--FEMIDGVAFATDWWAIIFNPSMP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F H + +T A I G+SA+ L G + + + S G + I LGD Sbjct: 182 YRFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVRTALKVGVSIGALLIPVQIFLGDLH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q K+AA+E WET LF IPD+ N I IP +I T S D Sbjct: 242 GLNTKEYQPAKVAAMEGLWETGT-NVPLILFAIPDEAARENHAEIGIPGLASLILTHSWD 300 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + GL + + + + V F S + +G G+ + Sbjct: 301 GELQGLNDFVAEDGTVLHPP------------------VAPIFYSFRVMVGTGMAMLAL- 341 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + P ++ LA+ L K Sbjct: 342 ----SWFGVFMMWKRRRMHPNPGACHW------------LAVEGL------------PKI 373 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L A + W+A AGW+ E GRQPW + V+ T +A + + A + ++V + Sbjct: 374 YLWALVPMAFSGWVATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAGTLVGYLVV 433 Query: 482 YTLFLVAELFLMFKFARL 499 Y L L A + ++ AR Sbjct: 434 YGLLLFAYISVIVYLARK 451 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 160/437 (36%), Positives = 231/437 (52%), Gaps = 19/437 (4%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD++ LSRLQF TA+ H++F+PLT+G+A +A ME Y + +Y M +FW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA EG+ AFFLESTF+GL FG D+ Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + + +VA+G++LS WI+ AN W Q P N E R EMVSF+E++ NP Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 V+++H + ++T AMFI+ ISA++++K ++ AKRS + G+ + G Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 +G+ Q KLAA EA WET+ A A LF IPD E E N+F I IP L + V Sbjct: 241 HAQLVGETQPEKLAAYEAHWETE-ANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDV 299 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V GLKE + + A+ ++ + + K +L L + Sbjct: 300 NAEVTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKT 359 Query: 361 T----PNVADATEAQIQQATKDSIPRVAPLYFAFR------------IMVACGFLLLAII 404 P A A A P ++ R +M++ G + Sbjct: 360 AFWMLPLPYIANTAGWIVAEWGRQP--WAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYS 417 Query: 405 ALSFWSVIRNRIGEKKW 421 L + V + +K+ Sbjct: 418 FLVWLMVYLMKKEVRKF 434 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%) Query: 309 ELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADAT 368 +L+ + + +A+ E + + ++G +L T + +A Sbjct: 243 QLVGETQPEKLAAYEAHWETEANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDVNAE 302 Query: 369 EAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALY 428 +++ + P V + AFR+MV G +L+ + W + + EK+ L++ A + Sbjct: 303 VTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKTAFW 362 Query: 429 GIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVA 488 +PLP+IA AGW VAE+GRQPWA+ VL T A S LTA +++ S+ L +Y+ + Sbjct: 363 MLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYSFLVWL 422 Query: 489 ELFLMFKFARLGPSSLKTGRYHFEQSST 516 ++LM K R ++T H + Sbjct: 423 MVYLMKKEVRK--FDMETSMKHLDHPKE 448 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 160/516 (31%), Positives = 249/516 (48%), Gaps = 60/516 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ +EL+RLQF T + HF + +++G+ F +A M+T + +G + + +T+F+GKL + Sbjct: 1 MNSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+EGL AFF+E+ F+GL+ FGW RL Sbjct: 61 SFAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VA + +SA ILVAN WMQ+P+ + + ++ N Sbjct: 121 PRRLHLACVWIVAGATVVSAYAILVANSWMQHPVG--YELVDGSARLTDIVPVLFNLTVG 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H V+ + G + +L I+A+++L+GRD A +A G+ A LS G Sbjct: 179 LTVAHVVSGALLAGTVVVLAIAAFHLLRGRDSAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQ-PAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G Q K+AA EA +ET+ PA + G +++P AL Sbjct: 239 GMLAMKQQPMKMAAAEALYETEKPAGLSLFALGGLSTNPGELIVDLKVPAAL-------- 290 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 SL+ QL + ST + + D Sbjct: 291 -------------------------SLINQLSTQSTVRGINDL----------------- 308 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 TEA+ + D +P V +Y++FR MV G L+AI+AL W +R+R+ + Sbjct: 309 ------QTEAEQRYGPGDYVPVVGLMYWSFRTMVGGGTALIAIMALGCWLAVRDRLAGSR 362 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLIC 479 L+ AL LP++A GW + E GRQPW I +L T VA + ++ A + S+ Sbjct: 363 RFLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANSPNVGAWTVGLSLAGFA 422 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 Y + R G + GR + Sbjct: 423 VFYGAVFFFAGRVAAHEVREGLEAPADGRASDSPPA 458 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 155/332 (46%), Positives = 214/332 (64%), Gaps = 4/332 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA+T M+HF+FVPLTLG++ ++A MET Y ++G + + MT+FWGKLF I Sbjct: 1 MDTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+TMEFQFG NW+ YS YVGDIFGAPLAIE +AFFLES F+GL+ FGWD++ Sbjct: 61 NFALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLVA+ +NLS L IL+AN WMQNP+ + R EM F ++ NP Sbjct: 121 SQKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +KF H + + Y A F++GISAW++L+ + F KRSF AA FG+A L ++GD S Sbjct: 179 IKFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLS 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKF-AIQIPYALGIIATRSV 300 E+ VQ K AA+E+ WET+ A L +PD++ E N A IP + ++A R Sbjct: 239 SVEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPDEKNERNSLEAFSIPNMISLLAFRDA 297 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLR 332 + V GLK + + ++ ++ L Sbjct: 298 NAEVTGLKSFPRELRPPVLPVFLSFRVMVGLG 329 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 138/397 (34%), Positives = 218/397 (54%), Gaps = 9/397 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ L+R+QFALT M+H+++ L++G+ ++ I+E +Y+ + IY M +FW K+F + Sbjct: 1 MDVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ + FGW+R+ Sbjct: 61 TFAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 H T +V LG++ SA+WI++AN WMQ P E M R E+ F E+V NP Sbjct: 121 SPKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++ H + ++ GA ++ ISA+Y+LK + FA++S I + GD Sbjct: 181 SMIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 SG + Q TKLAA+EA ++T+ TLFG+ + EE+ +AIQIP L ++ Sbjct: 241 SSGKVVAKYQPTKLAAMEALYQTESG-VPLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGD 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGL 355 + + GL ++ + + Y L+ + + ++ + KK L G Sbjct: 300 FNAEMKGLDQVNPEDWPNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYKKTLENHRGILW 359 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI 392 L+ A +A A P +Y RI Sbjct: 360 LMVFSAIYAQVANQAGWYSAETGRYP--WLVYGLLRI 394 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 84/196 (42%), Gaps = 1/196 (0%) Query: 309 ELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADAT 368 +++ +++ M+A E + V + + + LL + +A Sbjct: 244 KVVAKYQPTKLAAMEALYQTESGVPLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGDFNAE 303 Query: 369 EAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALY 428 + Q + P V ++ +R+M+A L+ ++ + + + + +L ++ Sbjct: 304 MKGLDQVNPEDWPNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYKKTLENHRGILWLMVF 363 Query: 429 GIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICGLYTLFLV 487 +A +AGW+ AE GR PW + +L + S S+ A ++ S+++ +Y L + Sbjct: 364 SAIYAQVANQAGWYSAETGRYPWLVYGLLRISEGLSKSVKANQVLGSIIMFMCVYLLLFI 423 Query: 488 AELFLMFKFARLGPSS 503 ++++ + + GP Sbjct: 424 LFVYMLNEKVKHGPEE 439 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 156/523 (29%), Positives = 235/523 (44%), Gaps = 63/523 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSRLQFA T M+H+LF PLT+G+ +L +E +++ + IY+ +FW K+FG+ Sbjct: 1 MDVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ L FGWDR+ Sbjct: 61 NFALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFET------MRMEMVSFSELV 175 G H T +VA+G S++WI VAN W Q P + +R E+V F +V Sbjct: 121 GPKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMV 180 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 NP + +H +V GA F++ ISAWY+LK R FAK+SF A F + + Sbjct: 181 FNPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQL 240 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 G + Q KLAA+E + TQ A LFG PD + + K+ I IP L ++ Sbjct: 241 ASGHFQAEGVAHHQPAKLAAMEGLYTTQK-QAPVYLFGWPDSQTKQVKYGIPIPGMLSLM 299 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 T + V GL +L V F + + G+ Sbjct: 300 VTGDSNQEVRGLDQLDPIWGTPP---------------------VWITFQAYHIMIAIGM 338 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 + T+ ++ A G LA + Sbjct: 339 IFIVSCTYSCFLLYRGTLYETR--WVLWYHVF-------ALGLAFLANEM----GWVSAE 385 Query: 416 IGEKKWLLR-AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFS 474 +G + W++ + G+P + A + ++ A ++ S Sbjct: 386 VGRQPWIVYPTLVDGLPTGGLRTSA---------------------ALSEAVIAEQVLGS 424 Query: 475 MVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 ++ +Y L V + L+ + GP +S Sbjct: 425 IIFFAIVYGLLFVLWITLLHQKISHGPDDHAKESGEHPRSDQP 467 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 150/333 (45%), Positives = 205/333 (61%), Gaps = 4/333 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D++ LSR QFA+T YHFLFVPLT+G+ L+A MET +V + +Y+ M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLAIE L+AFFLESTF+G++ FG D+ Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + W+VALG+N+SALWI+ ANG+MQNP+ + R+E+ +F E+V NP A Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVG--YIERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 FVHTV S Y+ GA F++ +SAW++L+ + F K+SF G+ A + +G + Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGHK 256 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFA-IQIPYALGIIATRS 299 S +Q K AA+EA WET F + IPD + E N + IP T S Sbjct: 257 SASFAAKMQPAKGAALEAVWET-KESLPFHIVQIPDPKNERNIVEFLTIPKLGSYFYTHS 315 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLR 332 D V+G ++ + ++ L+ L Sbjct: 316 FDGKVVGFDQIPKDERPNVNIVFYSFRLMVALG 348 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 3/229 (1%) Query: 278 EEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTD 337 ++ F Y L + + TP IG K + + G ++ E S Sbjct: 226 KQHVEFFKKSFKYGLILGLIAATATPFIGHKSASFAAKMQPAKGAALEAVWETKESLPFH 285 Query: 338 QA---VRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV 394 ++ + L L + + D Q KD P V ++++FR+MV Sbjct: 286 IVQIPDPKNERNIVEFLTIPKLGSYFYTHSFDGKVVGFDQIPKDERPNVNIVFYSFRLMV 345 Query: 395 ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 A G +A+ F+ +N++ E + L+ +Y + LP++A+ AGW VAE GRQPW + Sbjct: 346 ALGLYFVALFWYGFYLYRKNKLVESQRFLKLVMYSVLLPYVAINAGWVVAEVGRQPWTVY 405 Query: 455 EVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSS 503 ++ TA A S ++ +IFS+V + YT+ L+A+++LM K+A+ GP + Sbjct: 406 GLMRTAEAVSPISLSQIIFSLVSLVLFYTILLIADVYLMLKYAKKGPYT 454 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 158/506 (31%), Positives = 233/506 (46%), Gaps = 65/506 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + + V LSRLQFA+TA++H L+ LT GM L I+E +++ + Y +FW +L+ Sbjct: 5 LSNTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYV 64 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NF +GVATGL M FQFG NW+ +S VGD FG L EG MAF LE++F+G+ FGWDR Sbjct: 65 LNFGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDR 124 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + + H T LVA+G+NLS WIL AN W+Q P F + + + + NP Sbjct: 125 VPPLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIF--VDGKFVVQDYFAAIANPFM 182 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F+H + T I GISAW +L GR F RS + MA I +G Sbjct: 183 VNSFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHL 242 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 S ++ Q KLAA+EA WET PA PAA+++ +P+ + E N + + IP AL I Sbjct: 243 SAEQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSIPGALSYILEL 302 Query: 299 SV--DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 D P+ GLK+ R+ + + S + + GL Sbjct: 303 KPQLDKPIQGLKDWAPVDRPRMVGLI---------------------YYSFRIMVAIGLF 341 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 + S + + F G+L + Sbjct: 342 FAALMAVTVLQWLRGKLKPEIISQQKWLLRAWVFAA--PLGYLAV--------------- 384 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 E W++R GRQPW + + TA + S+L G+++FS+ Sbjct: 385 -ETGWIVRCV--------------------GRQPWIVYGEMRTAESASNLPPGEILFSLT 423 Query: 477 LICGLYTLFLVAELFLMFKFARLGPS 502 + +Y +FL+A L+ + R GP Sbjct: 424 GLSVMYIVFLIATLYFGSRIIRNGPD 449 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 159/504 (31%), Positives = 248/504 (49%), Gaps = 63/504 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+RLQFA T++YHF FVP+T+GMA L+A++ T + G K + +F+G L I Sbjct: 1 MDQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + ++GV TGL EFQFG NWS YS +VGD+FGAPLA+EGL AFFLESTF+GL+ FG++ L Sbjct: 61 SISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VALG+ LSAL+I+ AN WMQNP N +T R ++ S ++ NPV Sbjct: 121 PRRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFI 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSF----AIAASFGMAAVLSVIVL 237 ++H + + G +L +SAW + + F + + + + + Sbjct: 181 WGYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHV 240 Query: 238 GDESGYEMGDVQKTKLAAIEAEWET-QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 G + G Q K+AA EA W+T QP + G ++ K I+IP+ L ++A Sbjct: 241 GGQLGINETSYQPMKIAAAEANWQTCQPCSFSMLQIGGWTADDPPTKI-IEIPHLLSLLA 299 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 T + + V GL L Q++++ G V Q+ SM+ L Sbjct: 300 TGTWNGEVQGLTPLNEQYQQQYGP-------------GEYVPNVFIQYWSMRVMAYLATL 346 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 + + + + W R ++ Sbjct: 347 VALF-----------------------------------------GVWGIWLW--WRKKL 363 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSM 475 + L A + + P++ AGWF+ E GRQPW + ++ T S S +AG ++ S+ Sbjct: 364 ATARVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVSL 423 Query: 476 VLICGLYTLFLVAELFLMFKFARL 499 ++ LYT V LM + AR Sbjct: 424 SIVVVLYTTIGVIAAILMLRHARQ 447 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 165/456 (36%), Positives = 245/456 (53%), Gaps = 14/456 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V LSR+QFA+TA +HF+F PLT+G+A+L+ +M+T Y+ +G+++Y+ M++FW K+F I Sbjct: 1 MDVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA E + AFFLES F+G+ +G DR+ Sbjct: 61 SFVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K + + +VA+GS LSALWI++AN W Q P ++ R E++ F +LN Sbjct: 121 SKKVYWFSSLMVAVGSTLSALWIIIANSWQQTPAG--YHIVNGRAELIDFKAALLNASTV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +++HTV +TGA F++ ISAWY+L+ R+ AFAK+S A + A L+ I +G Sbjct: 179 PRYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMH 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAAIE +ET+ A+ LFGIPD++ F + IP AL ++AT D Sbjct: 239 AVQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIPKALSLLATGDPD 297 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GLK + + + L+ L + ++ + K L L + Sbjct: 298 GEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRLFLKLA 357 Query: 362 ----PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC----GFLLLAIIALSFWSVIR 413 P A E A P +Y R + + + F + Sbjct: 358 LWSVPLPFIANEVGWIAAEVGRQP--WIVYKLLRTVDGISYTVPAWQILASIILFVLIYS 415 Query: 414 NRIGEKKWLLRAALYGIPLPWI-AVEAGWFVAEYGR 448 +LLR L P + A E GR Sbjct: 416 LLFVVWFYLLRKKLAAGPEAFATANGVAKSGTEVGR 451 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 1/159 (0%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 LG L D ++ ++ P V + F +MVA G L + W Sbjct: 282 LGIPKALSLLATGDPDGEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWL 341 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAG 469 + + + + + L+ AL+ +PLP+IA E GW AE GRQPW + ++L T S ++ A Sbjct: 342 MSKGTLQDNRLFLKLALWSVPLPFIANEVGWIAAEVGRQPWIVYKLLRTVDGISYTVPAW 401 Query: 470 DLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 ++ S++L +Y+L V +L+ K GP + T Sbjct: 402 QILASIILFVLIYSLLFVVWFYLLRKKLAAGPEAFATAN 440 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 355 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 198/332 (59%), Gaps = 4/332 (1%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + LSR+QFA+TA +HFL+ PLT+G+A ++ ME YV SG + Y+ MTKFW KLF Sbjct: 4 DALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAAT 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA EG+ AFFLES F+ + FGWDR+ Sbjct: 64 FSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRVS 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFET--MRMEMVSFSELVLNPVA 180 H+ + +V GS +SA WI+VAN WMQ P A E MR E+V F +V NP Sbjct: 124 PKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPST 183 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H + ++ G ++ I+A+Y+LK R FAK+SF +A + + +V+G Sbjct: 184 VSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGHR 243 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 S + + Q +KLAA+E ++T+ A LFG P +E E I IP L + + Sbjct: 244 SAEVVAEYQPSKLAALEGLFKTEDG-APLYLFGHPSEETEETI-GIAIPGMLSFLVHQDF 301 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLR 332 V GL + + + +AY ++ L Sbjct: 302 SATVTGLDKFAKEDRPPVWITFQAYHIMVALG 333 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 2/204 (0%) Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKD-LGYGLLLKRYTP 362 V+G + V E + L + + + + +L Sbjct: 239 VVGHRSAEVVAEYQPSKLAALEGLFKTEDGAPLYLFGHPSEETEETIGIAIPGMLSFLVH 298 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 AT + + K+ P V + A+ IMVA G + I + + R + E K++ Sbjct: 299 QDFSATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFM 358 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICGL 481 L+ ++ + P+IA + GW AE GRQPW + +L TA A S S++ +++ S+ L L Sbjct: 359 LQVFIFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAISKSVSGAEVLTSLFLFTLL 418 Query: 482 YTLFLVAELFLMFKFARLGPSSLK 505 Y L L +F+M + + GP + Sbjct: 419 YFLLLFVWVFIMDRKIKAGPEDVD 442 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 352 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 203/500 (40%), Gaps = 68/500 (13%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R QFA T +H + LT+G+A L ++E +++ +QIY D+ K+W K+F +N Sbjct: 18 ALLLARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNV 77 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ MEFQFG NW S G + G + +E L+AFFLE+ F+G+ FG ++ Sbjct: 78 AVGVVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRP 137 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T +VA GS SA WIL AN WMQ P R + V + ++ NP + Sbjct: 138 WVHFLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGP-DGRFQPVDWWAVIFNPSFPYR 196 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 +H + + A + + AW++LK A+R F+ +A V+GD G Sbjct: 197 LMHMSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHGE 256 Query: 244 EMGDVQKTKLAAIEAEWE--TQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 D Q KLAA+E W LF IPD E N + IP + ++ Sbjct: 257 NTRDHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIPSVGSLYLRHNLT 316 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + L + V F + + +G G L+ + Sbjct: 317 GTIHSLNQFPPDE----------------------LPWVPGVFFAFRAMVGLGFLMIFF- 353 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + R+ + R MVA Sbjct: 354 ---------GVAGLVVRLRGRLWEARWLQRGMVA-------------------------- 378 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 P IA+ AGW V E GRQPW I L T + S + ++ S V I + Sbjct: 379 -------MAPAGVIAMLAGWVVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVV 431 Query: 482 YTLFLVAELFLMFKFARLGP 501 Y L + M + P Sbjct: 432 YLLVFALGMGFMLRLLAKPP 451 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 146/335 (43%), Positives = 199/335 (59%), Gaps = 4/335 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR+QFALT M+H+LF PLT+G+A ++A++ Y+ + +Y FW LF Sbjct: 1 MDVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAA 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA EG+ AFFLES F+ + FGWDR+ Sbjct: 61 NFAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 H LVA GS SA+WI+VAN W Q P E R E+ F + VLNP Sbjct: 121 SPRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + V+ +HT+ YV GA F+L ISA+Y+L+GR FAKRSF++A F L ++V GD Sbjct: 181 SVVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 S + + Q KLAA+E +E PA LFG+P EE + IP L ++ R Sbjct: 241 MSARVVAEHQPAKLAAMEGHFE--DGPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRD 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG 334 D P+ GL + + A+ L+ L + Sbjct: 299 PDAPIQGLASVPPDARPPVTVPFHAFHLMVALGTA 333 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 6/229 (2%) Query: 267 AAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYS 326 +AF L +E F++ +P+A S+ V G V E + Sbjct: 204 SAFYLLRGRHEEFAKRSFSVALPFAAVF----SLLLLVTGDMSARVVAEHQPAKLAAMEG 259 Query: 327 LLEQ-LRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAP 385 E R + + + L DA + D+ P V Sbjct: 260 HFEDGPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRDPDAPIQGLASVPPDARPPVTV 319 Query: 386 LYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAE 445 + AF +MVA G +A+ + W + + +WLL ++ + + + + GW VAE Sbjct: 320 PFHAFHLMVALGTAFIAVTLVGLWLKRKGTLFRTRWLLWIFVFAVLGTYASNQLGWIVAE 379 Query: 446 YGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICGLYTLFLVAELFLM 493 GRQPW + +L T + + S+TAG ++ S++L +Y L+ L++M Sbjct: 380 VGRQPWTVWNLLRTEHSFSPSVTAGQVLQSVILFGLVYFGLLLVWLYVM 428 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 350 bits (898), Expect = 8e-95, Method: Composition-based stats. Identities = 134/500 (26%), Positives = 207/500 (41%), Gaps = 79/500 (15%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR+QF T H LF L++G+A + + +G + Y + FW K+F + F +G Sbjct: 31 SRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAVGFVMGT 90 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 TG+ M FQFGTN+ +S G++ G PLA E MAFFLE+ F+G+ FG +++ + Sbjct: 91 VTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKVSDRTYF 150 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPVAQVKFV 185 + L G+ LS WILV N WMQ P + ++ P +V Sbjct: 151 LSSVLTGFGAWLSGFWILVVNAWMQTPQGYEMITRNGMEVAKLTDPIAAFFTPRMTWMYV 210 Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 H + + ++ A+ + G++A+ + K RD + IA + A V GD G + Sbjct: 211 HMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLLLIVAAPLQAVHGDAYGRHV 270 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEE------ETNKFAIQIPYALGIIAT-R 298 D Q K AA+EA +ET A LF IP + E N FAI +P +A+ Sbjct: 271 EDTQPQKFAAMEAHYETGT--ADLHLFAIPTSPDAIMNPSEENLFAISLPRVGSFLASGG 328 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 D V GL E + V F S + +G G L Sbjct: 329 DFDAVVKGLDEYEQ------------------------NPPVPLVFWSFRIMVGLGFLF- 363 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 + ++ + + R+R+ + Sbjct: 364 ------------------------IGLAFW------------------GGYLIYRDRLSD 381 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVL 477 LRA + PL + A+ GW+V E GRQPW + L T A SS L++ + S+ Sbjct: 382 SSLYLRAMIAASPLGYAALLTGWYVTEIGRQPWVVQGELKTGEAVSSTLSSTEATLSLAA 441 Query: 478 ICGLYTLFLVAELFLMFKFA 497 +Y +VA L+ + Sbjct: 442 FVVIYIGLVVAALYTLRWLI 461 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 131/481 (27%), Positives = 203/481 (42%), Gaps = 68/481 (14%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L R QFA T H + T+G+A L ++E +++ + +++Y D+ +W KLF + Sbjct: 7 ALLLVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTT 66 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A GV TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG ++G Sbjct: 67 AAGVVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGH 126 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T +VALGS +SA WIL AN W+ P V + ++ NP + Sbjct: 127 RVHFFATCMVALGSLVSAFWILSANSWLHTPAGFA-RAADGNFLPVDWLRIIFNPSFPWR 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 +H + + A I + AW++L+ A+ F++ ++ GD G Sbjct: 186 MLHMSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMGLWVIAIVAPLQLLAGDLHGR 245 Query: 244 EMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q KLAAIE W+ PA LF IPD + + N+ + IP + + Sbjct: 246 NTLEHQPQKLAAIEGSWQRPPAGEGEPLRLFAIPDMQAQRNRHELAIPRLGSLYLRHNWT 305 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + GL+E + F + + +G GLLL Sbjct: 306 GTIAGLREFPRSDLPPVPI----------------------VFFAFRAMVGLGLLL---- 339 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 +A G L L + R R+ E +W Sbjct: 340 --------------------------------IAVGMLSLVL-------RARGRLYEARW 360 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L R + P +A+ GW V E GRQP+ + +L TA + S L+ + S V I L Sbjct: 361 LQRVVVVMAPSGMLAMLCGWVVTEVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVL 420 Query: 482 Y 482 Y Sbjct: 421 Y 421 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 129/330 (39%), Positives = 192/330 (58%), Gaps = 4/330 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D V LSRLQFA+T M+H++F P+T+G+ +L +E +++ + +Y KFW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA EG+ AFFLES F+ + FGWD+ Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMR--MEMVSFSELVLNP 178 +G H + +VALG++ SA+WI+VAN WMQ P + + SF ++V NP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + H +A ++ GA +L +SAWY+LK R +++SF +A G+ V + + G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D S E+ Q K AA+E E+ AP L G + I IPY L ++ Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMES-GAPQDLHLIGWMNPSTHEVT-GISIPYLLTLLTHH 298 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLL 328 +DT + G+ ++ I ++ L+ Sbjct: 299 DLDTSITGMNDIPQDERPPILPVFYSFHLM 328 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 90/232 (38%), Gaps = 8/232 (3%) Query: 272 FGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQL 331 F ++ I + G+ T + + + A L + Sbjct: 214 FTGGSEKSFKVALVIGLIGVAGMGITGDSSAREVSVHQPAKFAAMEGVMESGAPQDLHLI 273 Query: 332 RSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFR 391 + + LL T + D + + +D P + P++++F Sbjct: 274 GWMNPS-------THEVTGISIPYLLTLLTHHDLDTSITGMNDIPQDERPPILPVFYSFH 326 Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 +M+ G L A+ W R + +K+WLL ++ + P IA +AGW VAE GRQPW Sbjct: 327 LMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFSVLGPQIANQAGWAVAELGRQPW 386 Query: 452 AIGEVLPTAVANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 + +L T A S LTA + + S+ + +Y L L L+ + GP Sbjct: 387 IVYGILRTEHAVSPTLTAAEALSSLGMFFVIYALLLALFLYQITHKIHKGPD 438 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 137/504 (27%), Positives = 218/504 (43%), Gaps = 62/504 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + + L+R QF AM+H ++ PLT+G+A +L ME +V + Y KFW KLF Sbjct: 4 LQNPEFLARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFL 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF +GV +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R Sbjct: 64 INFGVGVISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGR 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G H+ T +VA GS LSA WI+VAN WMQ P + + ++ + V NP Sbjct: 124 VGPKMHLFATGMVAFGSTLSAFWIMVANSWMQTPAG--VKLVDGKFAITNWYDAVFNPDL 181 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F H + + + G+SA+Y+LK R F + +F A I +GD Sbjct: 182 PYGFGHMFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVISLFIVAPLQIFIGDS 241 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 +G + + Q KLAAIEA W T A + L IP+Q+++ N +A++IP L +I T+ Sbjct: 242 AGSSLAETQPAKLAAIEAHWHTNKPGEGAPWALLAIPNQKDQKNDWALEIPDGLSMIVTK 301 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 ++ V+GL + + A+ ++ A + +K Sbjct: 302 TMTGKVVGLDHFKPDDQPPVWIPFYAFRVMVAAGVFVAFMAFWTLWMLWRK--------- 352 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 + A ++ + + + V +Y A + +G Sbjct: 353 --RERMTAARISENKWLLRGWLLAVPAIYAAVEA-----------------GWMTREVGR 393 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 + W++ + T+ S+L A +++S+ + Sbjct: 394 QPWIVYGM------------------------------MRTSQGVSNLPADTVLWSLAMY 423 Query: 479 CGLYTLFLVAELFLMFKFARLGPS 502 Y + V + R GPS Sbjct: 424 MLFYGVIGVTAFVFAARMIRKGPS 447 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 341 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 152/532 (28%), Positives = 239/532 (44%), Gaps = 78/532 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGK---------QIYKDMT 52 + I L+RLQFA+T +YH+LFVPL++ +A A+++T ++ + Y ++ Sbjct: 1 MSIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLS 60 Query: 53 KFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVG 112 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+EG++AFFLE+TF+G Sbjct: 61 LLTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLG 120 Query: 113 LFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFS 172 L++FG DRL + H+ W+VA+G+ +SA IL AN +MQNP+A + T R + SF Sbjct: 121 LWWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFR 180 Query: 173 ELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG------RDFAFAKRSFAIAASF 226 +L+LN V F HT A + G ++ + W++L+G DFA + A Sbjct: 181 DLLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFAAFRALSRFGAWA 240 Query: 227 GMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 +A V GD G + +VQ K+AA E +ET A F++F + FAI Sbjct: 241 TLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRPTFAI 299 Query: 287 QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 ++P L +A S V+GLK+L + + +G + F S Sbjct: 300 EVPGMLSFLAKGSFSAEVLGLKDLQDAYAAQFG-------------AGDYTPWIPVAFWS 346 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 + +G G L + + Sbjct: 347 FRLMIG-------------------------------------------VGMLAALVALV 363 Query: 407 SFWSVIRNRIGE-----KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV 461 W ++ + + + +L LP A GW E RQPW + + TA Sbjct: 364 HLWVTRKSAVLDPDPRLARGILWTLPVLPLLPLFANSFGWIFTETARQPWLVFGLFKTAD 423 Query: 462 ANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFE 512 S L+ ++ S+ +Y A L+ + R G L + E Sbjct: 424 GVSPGLSFAEVALSLAAFTLVYGALAWAWTLLVTRLVRRGLPELPVPQREDE 475 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 340 bits (873), Expect = 6e-92, Method: Composition-based stats. Identities = 126/515 (24%), Positives = 205/515 (39%), Gaps = 66/515 (12%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V LSRL FA H L+ P+T+GM++LL +E ++ +G + + + +F+ K+F INF Sbjct: 8 PVLLSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINF 67 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 GVATG+TME FG + +S VG FG L E + AF E+ F+GL FGW ++ K Sbjct: 68 GAGVATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSK 127 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T+ V L S LSA+WILVAN WMQ+P + ++ ++ +LN Sbjct: 128 GMHAFATFNVGLSSTLSAMWILVANSWMQSPNG--VVLKNGLFQVTNWWNAILNENFTWG 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F H + +S+W++LK R+ + + I +GD G Sbjct: 186 FPHMWVATVELALFVFAAVSSWFILKNRNADLFTKLLKPTLLALLIVAPIQIFIGDTLGR 245 Query: 244 EMGDVQKTKLAAIEAEWET----QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 ++ Q T LAA+E + T + L P+ + + N FAI IP+ L ++ T + Sbjct: 246 DVAMTQPTSLAAMEGHYHTYLPNGKVNTGWHLIAFPNAKNDGNSFAITIPHVLSLLETHT 305 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V G+ + + A+ + + A+ + ++ L K Sbjct: 306 WNGKVTGMDSFPAKDRPDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALRKH 365 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 + R +V GF Sbjct: 366 P---------------------------WFLRSVVFSGF--------------------- 377 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 LP++A+ GW+ E GRQPW + ++ T S ++ G IF Sbjct: 378 ------------LPYLAIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIFWFAGYI 425 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS 514 + + + G + F Sbjct: 426 VFELVVWSGAWYFFSRVIAKGVDDIAPSDTLFHHP 460 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 340 bits (873), Expect = 7e-92, Method: Composition-based stats. Identities = 116/482 (24%), Positives = 208/482 (43%), Gaps = 72/482 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R Q A + +H +F + +GM L+ I E +++ + ++ Y + + W K + Sbjct: 1 MDELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G I G A+EG AFF+E+ F+GL+ +GWD+L Sbjct: 61 LFAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + VAL S + +L AN WMQ+P F + + + + NP Sbjct: 120 PPKIHWLCGFPVALSGLASGVLVLSANAWMQSPTG--FELVGGQPTNIDPVKALFNPAWG 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 V +H+ S Y+ A + + A+ +L+G+ + +R+ IA + + L + + GD S Sbjct: 178 VMALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDAS 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q KLAA+E + ++ A ++ G PD E E ++A++IP L +A + Sbjct: 238 ARSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL + + A+ ++ +G G+ L Sbjct: 297 ALVRGLDSVPRDQWPNVVVVRAAFQVM----------------------VGLGIFL---- 330 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 V+ Y+A R FW + + Sbjct: 331 -------------------VVVSVWYWASR----------------FWRRLHTKW----- 350 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L A + + A+EAGW V E GRQPW I ++ T+ A + + +++ + + Sbjct: 351 LYIALVLSGIAGYTALEAGWIVTEVGRQPWIIYGIMRTSEAVT--PTEGVFETLIAVVAI 408 Query: 482 YT 483 Y Sbjct: 409 YA 410 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 125/503 (24%), Positives = 197/503 (39%), Gaps = 66/503 (13%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + +L+RL F H L+ PLT+G+A L E ++ + + +T+F+ KLF INF Sbjct: 7 MTDLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINF 66 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW ++ K Sbjct: 67 GAGVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISK 126 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ T+ VA S LSA+WILVAN WMQ+P + E + ++ + NP Sbjct: 127 KMHLFATFNVAFSSMLSAMWILVANSWMQSPTG--VHLEKGLFLVDDWTAAIFNPNFLTA 184 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F H + G F+ GISAW + K R R+ + + + +GDE G Sbjct: 185 FPHMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRTLTASLMALVIVAPLQVYIGDELGR 244 Query: 244 EMGDVQKTKLAAIEAEWET----QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + + LAA+E W T ++ L PD+E+ TN F I IP+ L ++ Sbjct: 245 TVAEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVLSLLEDHK 304 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V GL + + + A+ ++ A + K L +R Sbjct: 305 WVSTVKGLDQFKPEDRPPVLAPFYAFRIMVAAGGILMLVAFWALYLRYKGKFNALELQRR 364 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 + R ++ L I +W Sbjct: 365 P---------------------------WFLRAVIFSAILPYVAIWTGWW---------- 387 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 E RQPW + ++ T+ S ++ I + Sbjct: 388 -----------------------TREIARQPWIVHGMMRTSEGVSQMSISAEIAWFIGFV 424 Query: 480 GLYTLFLVAELFLMFKFARLGPS 502 + + + K R GP Sbjct: 425 FFDLVVWIGAWYFFSKVVRRGPD 447 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 117/518 (22%), Positives = 198/518 (38%), Gaps = 67/518 (12%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V+L+R Q A + +H F +G+ +LL E ++ +G ++ +TK W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+G +G + F+FG W + G G +EG AFF E+ FVG++ +GW RL Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEG-FAFFTEAIFVGMYLYGWKRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H W +A+ LS L+I+ N WM P + ++ ++P Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRG--IVEQNGKLLEAKPYAPFISPGTPP 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + VH + + + + I A ML+GR + +R I + +A +++GD + Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIGLAVVLACAPLQLIVGDWAA 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 G Q KLAA+E + T + A F L GI D + ++ ++IP L ++ S Sbjct: 245 RVAGANQPFKLAAMEGLYHT-GSHAPFALGGIYDNKTGEIRYGLEIPGGLSLLEGFSTGH 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GL + +G G L + Sbjct: 304 VIKGLDGAPPDERP----------------------NGTLVHGAFTTMVGAGSALIGLSL 341 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 + ++ + +P + Sbjct: 342 ITGFVVLRRRRRGERPLLP------------------------------------TSRPW 365 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 L AA P +A+ GW V E GRQPW +G+ + +T GD + M + Sbjct: 366 LIAAACTGPAAMLAMLTGWEVTEGGRQPWIVGDHMR---VVEGVTGGDAVAPMFAGTLVL 422 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 L L L L+ + G S + R Q + + P Sbjct: 423 YLGLAGALLLILRKMATGGPSGEQLRP--GQPAGPSAP 458 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 182/323 (56%), Gaps = 5/323 (1%) Query: 1 MLDIV-ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF 59 MLD V LSR QFA+TA++H L+ LT+ ++ L ++E +++ +G +Y +FW KL Sbjct: 1 MLDHVANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLL 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +NFA+GV +G+ MEFQFGTNW+ +S Y G G L EG MAF LE+ FVG+ GW Sbjct: 61 VLNFAVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWG 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 R+ + H+ T +VALGS++SA WI+VAN WMQ P + ++E+ + + NP Sbjct: 121 RVPRGVHLFATSMVALGSSISAFWIMVANSWMQTPAG--YAVVNGKIEVTDYLVAIFNPD 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 H + TG I GISA+ + + R F RSF IA S + A I LGD Sbjct: 179 MVWGVSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIALSVLVVAAPLQIWLGD 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWET--QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 SG + + Q K AAIE W T A+++L PDQ+ + N +++++P L ++ T Sbjct: 239 SSGVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDWSLEVPGMLSVLGT 298 Query: 298 RSVDTPVIGLKELMVQHEERIRN 320 S+ V GL + + + + Sbjct: 299 HSLHGQVKGLTDFAREDQPPMIP 321 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 181/329 (55%), Gaps = 4/329 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA T YH L+ T+G+A+ + ++ +++ + +Y+ + +FW K+F + Sbjct: 1 MDQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV TG+ + +Q G NWS Y+ D G +E L AFFLE+ F+G+ +G +R+ Sbjct: 61 AFGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H +VA+G+ LSA WI+ AN WMQ P A R F +V NP Sbjct: 121 GEKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFT-TTADGRFVATDFWGVVFNPSMP 179 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR--DFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + H + + ++TG + G++A+++ +GR D A+++F+I + + + +++GD Sbjct: 180 YRLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + G Q KLAAIEA W+T L PD++ E N +A++IP +I T S Sbjct: 240 QHGLNTRKYQPMKLAAIEARWDTARR-VPINLIAWPDEKAERNDYALEIPLLGSLILTHS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLL 328 ++ V GLKE+ + A+ ++ Sbjct: 299 LNGEVKGLKEVPPSERPPVLPVFLAFRVM 327 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 138/507 (27%), Positives = 223/507 (43%), Gaps = 58/507 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYV--LSGKQIYKDMTKFWGKLF 59 L + LSR+QFA+TA+ HFLFV T+GM I E +Y + Y +T F+ ++F Sbjct: 10 LAVTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIF 69 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +F GV TGL MEFQFG NWS ++ +GD+ G PLAIE +++FF+EST +GL+ F W Sbjct: 70 FFSFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWG 129 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 +L K H + + S S +WI+ N +MQNP F E R + S L+ NP Sbjct: 130 KLPKRAHAWLGVGMLGASLFSIVWIIAINAFMQNP--YGFRLEGGRARLTSLITLLQNPQ 187 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + +F+H + + +TG GI+AW +L RD + K + I + A GD Sbjct: 188 YRPEFLHVLFAILITGGFLTAGIAAWQILHKRDTSAFKIAVQIGLLIALPAAFLQPAQGD 247 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAP---AAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 + G +Q K AIE +ET+ +P A + + + +++ T K A+ IP Sbjct: 248 DQGAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIPNMGTYFG 306 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + + G+ + + + Sbjct: 307 KNTFTGTMPGMNAVAKMYHAKF-------------------------------------- 328 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR- 415 D T A+ P V L++ +MV G+ + + R + Sbjct: 329 ---------DKTVAKSYDGQMTYYPPVTLLFWTMHLMVYAGYFFTMFALFATIMLHRRQS 379 Query: 416 -IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIF 473 I + LR + + LP++ +GW VAE GR P+ + +L A S S+T + Sbjct: 380 AIEDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSVTVTEAGT 439 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLG 500 S+ L + +++ + + G Sbjct: 440 SLALFLMADIFLVTTMIYISHRTVKRG 466 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 160/522 (30%), Positives = 237/522 (45%), Gaps = 55/522 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYK----DMTKFWGK 57 +D +EL+RLQFA T H+LFV LTLG+ L+AI+ T V + + + KFWG+ Sbjct: 1 MDTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 L+ IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FG Sbjct: 61 LYVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL + WLV L + SA WILVANG+MQ+P+ + R + F+ + N Sbjct: 121 WDRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVGYEV--REGRAYLTDFAAQLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYML-KGRDFAFAKRSFAIAASFGMAAVLSVIV 236 P A V F H + + +TG +F+ G+SA+++L + R+ F + A+ V + Sbjct: 179 PNATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAAASTFPVYM 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 LG + D Q KLA L G E + + P Sbjct: 239 LGAAQFAVLADSQPMKLA---------------LLAGEGTSELQKDMVERHGPG------ 277 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 V H + + L L + R + ++ L G L Sbjct: 278 -----DYVPPEWIETWLHTMANIGYLVSTLALCALLVLFRARFTRSRLLAIVMVLAVGGL 332 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 Y + T + IM AC I + RI Sbjct: 333 FGLYLGSYLFDTPGPYNEI----------------IMPAC------IALAAVVLGFGGRI 370 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 + L + IPLP++A GW E GRQPW + L + A S ++ G ++ S+V Sbjct: 371 RRWRGLGWLLVVAIPLPFVASVGGWLFREVGRQPWIVYGELKVSDAVSPVSFGHMLTSLV 430 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 + G+ V L+ +FAR GP++ + G E T Sbjct: 431 IFVGVLGALAVTNWTLIARFARRGPAASQLGVARDEVPVLET 472 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 119/496 (23%), Positives = 216/496 (43%), Gaps = 70/496 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +R Q A++ +H +F + + M F + I +Y+ +G +IYK +TK W + I Sbjct: 14 MDDFIAARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAI 73 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA G +G + F+ G W + + G IFG P ++EG AFF+E+ +G F +GW+R Sbjct: 74 LFATGAVSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWNRF 132 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H +V + S + ++ AN WM +P F++ + + + + N Sbjct: 133 NRWFHWATGLVVGISGIASGILVVAANAWMNSPAG--FDYVDGKYINIDPIQAMFNDAWF 190 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + + +V + G+ A ++K ++ +F +F I+A A L + GD S Sbjct: 191 SQALHMMLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDIS 250 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++G Q KLAA+EA +ET+ A A+F + GIPD+E T K+ I++P L +A +D Sbjct: 251 AKDVGKRQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKYGIKVPGLLSFLAYGDID 309 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 PV GL ++ + A+ ++ +G G+LL + Sbjct: 310 KPVTGLHDIPRDEWPPVAITHYAFQIM----------------------IGLGMLLVLLS 347 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 A + + FR L + I L + ++ Sbjct: 348 ILYFIALFKKKSWLKST---------WLFR-------LFVIAIPLGYIALEAGW------ 385 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 V E GRQPW I ++ T A + + + +S + + Sbjct: 386 --------------------VVTEVGRQPWIIYGIMRTIDAVTPMPG--IAYSFYVFTAV 423 Query: 482 YTLFLVAELFLMFKFA 497 + VA ++L+++ Sbjct: 424 FVSLSVAVIYLLYRQI 439 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 126/507 (24%), Positives = 220/507 (43%), Gaps = 67/507 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M +++ R+QFA T +H+LF LT+G++ ++ + Y+ + + Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LA+EG+ +FFLES+F+GLF FG Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LG H L+ +GS S I+ + WMQNP+ + E + + +F L LNP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV-LGD 239 ++H A+ VT + + GI A+Y+L ++ +F K FG+ + + V V GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q AA+E + T+ + L G PD +++ I +P L + + Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDKKLDNKIAVPNILSFLTYGN 312 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + + GL + +G+ + + +G G + Sbjct: 313 WEQEIKGLDQFEEDLHPTNISGL---------------------YYAYHIMVGLGTV--- 348 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 + Q + + + + ++ M + + +G + Sbjct: 349 ----FIGLMVISLFQLIRGKLFQTKWILWSLMFM------MPFPYIANTTGWYTAELGRQ 398 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLI 478 WL + ++ TA S +++G+ +F+++ Sbjct: 399 PWL------------------------------VYNLMRTAAGASPTVSSGNTLFTLLGF 428 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLK 505 GLY L + L L+ K GP ++ Sbjct: 429 IGLYLLLGMLFLLLVGKIINKGPHNVD 455 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 126/334 (37%), Positives = 196/334 (58%), Gaps = 3/334 (0%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M++++ LSRLQFA+TA +HFLFVPLTLG+A L+A+MET+Y + + ++ M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLA+E L AFFLE TF+G + F Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + W+VALG+N+S+LWIL ANG+MQ+P+ + + ++ M F L+ N Sbjct: 121 -RQKLKAFSMWMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITNGYV 179 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +HT+ + Y+ + ++GI A++ LKG + K+SF IA +A + + VLG Sbjct: 180 WYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVLGHG 239 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFA-IQIPYALGIIATRS 299 + +Q TK AA++A WET+ + L +PD +N + IP + T S Sbjct: 240 YAQYVTALQPTKGAAMDAIWETRSS-VPMYLIQVPDSSTGSNSVQLLGIPGLASFLYTGS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRS 333 + GL +L + ++ L+ L S Sbjct: 299 FSGTITGLNQLPQDELPPVEMIFWSFRLMTILGS 332 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 76/150 (50%) Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 + LG L T + Q +D +P V ++++FR+M G L + + L Sbjct: 282 VQLLGIPGLASFLYTGSFSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLG 341 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 + ++ K L+ ++ IPLP++ + AGW VAE GRQPW + +L TA SS+ Sbjct: 342 LYLQKSGKLYTSKKYLKLLMWSIPLPYLTITAGWIVAEVGRQPWMVYGLLRTANGVSSVP 401 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFA 497 D++ S+ LI Y + L+ E++L+ K Sbjct: 402 TSDVLLSISLISAFYMVLLIFEIYLIKKTV 431 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 117/332 (35%), Positives = 177/332 (53%), Gaps = 4/332 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + L+R+QFAL +H+LFVP++LG++ ++ +ME +Y+ + K IYK +T FW K+F + Sbjct: 1 MSAEILARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV TGL F FG NWS ++ Y G++FG L EG+ AFFLES F+G+ FG ++ Sbjct: 61 TFVVGVVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 K H +VALG+++SA WI+ AN WMQ P + +M SF VL+P Sbjct: 121 SKKMHFFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 A +F H V +++G +L +SA Y+ K R FA + I+ + + D Sbjct: 181 ALQRFTHVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSAD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + + Q KLAA E ++TQ L GI D ++E I IP L ++ R+ Sbjct: 241 VTARGVAKHQPAKLAAFEGVFKTQ-GHTPIYLLGIVDMKKERVI-GIPIPSGLSLLVHRN 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQL 331 TPV GL + + + Y L+ L Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLMVML 330 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 1/140 (0%) Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 A + Q KD P VA ++ + +MV +++ + ++F + KK +L Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSWSCKKGILW 358 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICGLYT 483 + + P + E GW E GRQPW + +L T A S + AG + S++L ++ Sbjct: 359 ILSFSVLCPELCNEIGWISTEVGRQPWVVYGLLKTKDATSPIVNAGQIWQSLILFSIIFI 418 Query: 484 LFLVAELFLMFKFARLGPSS 503 L + L+ K GP Sbjct: 419 CLLSVFVSLLLKKIGEGPDE 438 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 311 bits (796), Expect = 5e-83, Method: Composition-based stats. Identities = 108/427 (25%), Positives = 196/427 (45%), Gaps = 23/427 (5%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +RLQ A + +H +F + + M F +++ ++ + K +Y+D+TK W K I Sbjct: 1 MDDFLAARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA G +G + F+ G W + + G IFG P ++EG AFF+E+ +G + +GW++L Sbjct: 61 FFATGAVSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEG-TAFFIEAIALGFYLYGWNKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H +V + LS + ++ AN WM +P F++ + + + + N Sbjct: 120 NPWFHWATGVVVGVSGLLSGILVVAANAWMNSPAG--FDYINGQYLNIDPIKAMFNEAWF 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + +V+ + G+ A +LKG++ AF ++F IAA FG A + GD S Sbjct: 178 SQSLHMCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDIS 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAA+EA + T+ A + GIPD + +A++IP L +AT + Sbjct: 238 AKDVAKRQPEKLAAMEAHFHTEKF-APLIIGGIPDTANKKVDYALKIPGLLSFMATGDFN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK------------ 349 V GL + + + + A+ ++ L A+ KK Sbjct: 297 GEVKGLDAVPKEDQPPVAVTHYAFQVMVGLGMAMVGIAILYFIALWKKKQWLDSKWLLKL 356 Query: 350 -----DLGYGLLLKRYTPNVADATEAQIQQA--TKDSIPRVAPLYFAFRIMVACGFLLLA 402 LG+ L +T I+ T D++ + + ++F + A L Sbjct: 357 FVAATPLGFIALEAGWTVTEVGRQPWIIRGVMRTADAVTPMPGIVYSFYLFTAVYISLAI 416 Query: 403 IIALSFW 409 I++L + Sbjct: 417 IVSLLLY 423 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 115/510 (22%), Positives = 197/510 (38%), Gaps = 75/510 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R F T +H +F L +G+ ++ + E +Y + Y M K W K + Sbjct: 1 MDDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + TG Q W + +G + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + V +G+ SA+ I + + P F ++ V NP Sbjct: 120 SPAMRIVAVFFVLVGAAASAVLITNVHAFEGTPAG--FKILNGKITDVDPWAAFFNPSFF 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA----FAKRSFAIAASFGMAAVLSVIVL 237 + H V S ++TGA + ++A+ M++ R F +++ +A + G L + Sbjct: 178 ITAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G ES + + Q KLA E +ET + A + G D EE K+AI+IP+AL +A Sbjct: 238 GHESAQMLYEYQPEKLAGAEGLFET-RSHAPLAIGGFTDPNEEKVKWAIEIPWALSFLAA 296 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 DT V GL R + FN+M +G G+LL Sbjct: 297 NRFDTVVKGLNAFP--------------------RDEWPPLFIHTLFNAM---VGVGMLL 333 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Y+ + KD P + F Sbjct: 334 ILYS----IIGVVWRKVLKKDRFPTWLLIIF----------------------------- 360 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 + P I +E GW A GRQPW I +L T+ ++ + ++F + Sbjct: 361 ---------MTAGPFSLIGIEFGWIFACTGRQPWVIYHLLKTSDVVTTTGSIGVLF--LF 409 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 +Y + A ++++ + R P Sbjct: 410 FTFVYAVLGAAVVYVLLYYFRKHPVDEDLN 439 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 133/498 (26%), Positives = 212/498 (42%), Gaps = 69/498 (13%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + LSR+Q A T +H +F T+G+A LA++E + + +G ++Y+ + +FW K+FG+ F Sbjct: 5 ALLLSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAF 64 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 +GV +G+ M FQFGTNWS S G I G L E AF LE+TF G+ G R+ Sbjct: 65 GMGVVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRP 124 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 ++ LVA G+ +SA WILV N WMQ+P+ + + ++ ++ N V V+ Sbjct: 125 WFYLTSCILVAAGTTMSAFWILVNNSWMQHPVG--YVVQNGIFVPTDWAAIIFNHVVWVR 182 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F H + Y+T A + + A Y+LK R A ++ + A V I+ G +G Sbjct: 183 FPHMLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGD 242 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 + D Q K AA+E W T PAA +F IPD E N+F ++P +IA+ + D+ Sbjct: 243 YLHDDQPAKFAAVEGRW-TDEQPAAEVIFAIPDAAHERNRFEWKVPVLGSLIASGTADSR 301 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 +GL + + A+ ++ G +L + Sbjct: 302 EVGLTDFAAADRPPVLIPFFAFRVM--------------------AGCGLIMLALAWAGT 341 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423 VA ++ +AC F L I L+ W +G + W + Sbjct: 342 VAARRGRLERRRWLLWP-------------LACSFPLGFIAILAGWFTA--EVGRQPWTV 386 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICGLY 482 VL TA A LTA ++ L +Y Sbjct: 387 W------------------------------GVLRTADALTPGLTAHFAAATLALFVAIY 416 Query: 483 TLFLVAELFLMFKFARLG 500 ++ + + R G Sbjct: 417 AFIFCFGVYYIVRIVRRG 434 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 117/504 (23%), Positives = 211/504 (41%), Gaps = 73/504 (14%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V SR+ LT +H ++ + +G+ ++AI + V + Y + + W + F I Sbjct: 5 DPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVIT 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 A+GV TG + Q W ++ G + PL +E AFF E+ F+G++ + WDR Sbjct: 65 VAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFMET-FAFFFEAIFLGIYLYTWDRFE 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + +H+ + VA+GS+ SA++I + N +M P F + + + + NP Sbjct: 124 NQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQG--FALKNGEIVNIDPIAAMFNPAMP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 K H +A+ Y+T A + I+AW++LKG + +++ + + ++ ++GD S Sbjct: 182 TKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGDLS 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q KLAA E +ET + A FG+ +E+ K+A++IPYAL ++A Sbjct: 242 GKFLAVYQPEKLAAAEWHFET-SSHAPLVFFGML-EEDGEVKYALKIPYALSVLAHNHPG 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL ++ + + G+ L Sbjct: 300 AIVTGLNDIPKDERPPLY-----------------------IHYLFDMMVAIGVFLMLVA 336 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + + TK + F ++ A G L + I ++ Sbjct: 337 TAYWLGSVFRWKWTTKK---------WFFGLLAAGGPLSMIAIEAGWYL----------- 376 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 AE GRQPW + + TA A +S D++ +VL C L Sbjct: 377 ----------------------AEVGRQPWILRGYMKTAEAATSSAHVDMM--LVLFCLL 412 Query: 482 YTLFLVAELFLMFKFARLGPSSLK 505 Y + +A + ++ + R P + Sbjct: 413 YLVLGIASVIVLVRLFRRNPVERE 436 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 111/514 (21%), Positives = 190/514 (36%), Gaps = 74/514 (14%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +R Q + +H + +GM L + +G Y+ + + W + G+ FA Sbjct: 18 LVAARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFA 77 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G +G + F+ G W GD+ G P +EG AFF+E+ F+G++ + WDRL Sbjct: 78 VGAVSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEG-FAFFIEAIFLGIYLYAWDRLPPR 136 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H+ V L SA +++ AN WM P F+ + V E + NP + Sbjct: 137 VHLLTGVPVVLAGVASAFFVVTANAWMNQPRG--FDLVDGEVVGVRPWEAMFNPATPPQT 194 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 VH + + ++ + + A + +GR + F + +F Sbjct: 195 VHMIVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVPFTFAAVLA------------- 241 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 ++A + L I E + A P +LG I T Sbjct: 242 -----PVQVAVGDWAAHFLGQYQPLKLAAI----EGLARTAPGAPLSLGGIYTGG----- 287 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 + + LL + P Sbjct: 288 --------------------------------------ELRYALEIPNALSLLAHWDP-- 307 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR-IGEKKWLL 423 DA + QA P V ++ +F++MV GF L+ + S R R + +W L Sbjct: 308 -DAIVLGLDQAPPRFQPPVNVVHLSFQVMVGIGFALVLLGIWLGVSWWRRRDLPRSRWFL 366 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483 A+ P +A+EAGW V E GRQPW + +VL T A + L ++ + +Y Sbjct: 367 LASAAAGPAAVVAMEAGWVVTEVGRQPWIVYDVLLTRDAVNPQPG--LWAGLLTVLVVYA 424 Query: 484 LFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 + A + ++ + ARLGP ++ Sbjct: 425 VLTAATVHVLRRLARLGPVPVRGLAPQEHAPRPP 458 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 130/525 (24%), Positives = 203/525 (38%), Gaps = 84/525 (16%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 +L SR+QF T H +F L++G+A + V + +Q Y + FW K+F Sbjct: 17 LLSPEIASRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFA 76 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 + F +G TG+ M FQFGTN+ ++ G++ G PLA E MAFFLE+ F+G+ +G +R Sbjct: 77 VGFVMGTVTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRER 136 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNP 178 + ++ + LV +G+ LS WILV N WMQ P + ++ L P Sbjct: 137 VADRTYVLSSVLVGVGAWLSGFWILVVNAWMQTPRGYEMVTRNGMEVAKLTDPVAAFLTP 196 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 +VH + + ++ A+ + G+SA+ + K D + +A + + V G Sbjct: 197 RMPWMYVHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHG 256 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP------DQEEETNKFAIQIPYAL 292 D G + D Q K AA+EA +ET A L P N F + +P Sbjct: 257 DAYGRHVEDTQPQKFAAMEAHYET--GSADLHLLAFPKSLDALTDPRTENLFTVSLPGIG 314 Query: 293 GIIAT-RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +A+ D VIGL E + V F S + + Sbjct: 315 SFLASGGDFDAEVIGLNEYEE------------------------NPPVALVFWSFRFMV 350 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 G G L T + + M+A A + ++ Sbjct: 351 GLGFLFIGLALWGGYLTYRGRLTESTRYLKS----------MIAASPFGYAALLTGWY-- 398 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGD 470 V E GRQPW I L T+ A SS LT + Sbjct: 399 -------------------------------VTEIGRQPWVIQGELKTSEAVSSTLTGTE 427 Query: 471 LIFSMVLICGLYTLFLVAELFLMFKFAR-----LGPSSLKTGRYH 510 ++V LY ++ L+++ R LG GR+ Sbjct: 428 ATLTLVGFVVLYIALILTALYVLKWLIRGELRSLGVQESSAGRWR 472 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 183/416 (43%), Gaps = 11/416 (2%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +RLQ A T +H +F + +G+ L+ + E + + +G +++ + K W K F + FA Sbjct: 22 LLPARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFA 81 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G +G + F+ G W + G + G P +EG AFF E FVG++ +GW+RL Sbjct: 82 VGAVSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEG-FAFFTEGIFVGIYLYGWNRLAPF 140 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H +AL +SA +++ N +M P + ++ V +LNP + Sbjct: 141 HHWLCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDA-DGKLLDVQPWTAMLNPATGAQT 199 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H + + Y+ + AW +L+GR+ + +R+ + G L +G +G+ Sbjct: 200 THMIVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHV 259 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q KLAA+E +WET+ A + GIPD E +T +AI+IP L ++A + V Sbjct: 260 VAVTQPIKLAAMEGQWETETY-APLRIGGIPDPETKTTPYAIEIPGMLSVLAYDNPAAEV 318 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQF------NSMKKDLGYGLLLK 358 GL A+ ++ + + + + ++ + + L L Sbjct: 319 QGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGKSAWHERRWWLLTLL 378 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV--ACGFLLLAIIALSFWSVI 412 P A EA P + + + V A G + + +S + V+ Sbjct: 379 ASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVTQAPGVWFIFAVTMSIYLVL 434 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 +L + A + +D P ++ AF+IMV G LL+ I S + + + Sbjct: 305 MLSVLAYDNPAAEVQGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGK 364 Query: 416 --IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIF 473 E++W L L PL +A+EAGW V E GRQPW + L T A + A + F Sbjct: 365 SAWHERRWWLLTLLASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVT--QAPGVWF 422 Query: 474 SMVLICGLYTLFLVAELFLMFKFARL 499 + +Y + V + ++ A+ Sbjct: 423 IFAVTMSIYLVLTVGCISVLRILAKQ 448 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 115/499 (23%), Positives = 197/499 (39%), Gaps = 73/499 (14%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D ++ +R A++ H + ++ +E +Y+ +G +Y+ + + W ++ Sbjct: 19 DHLDQARQMQAMSFAVHIPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIMVAL 78 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG + F+ G W + GD+FG AIEG AFFLE+ F+ ++ +GWDRL Sbjct: 79 FAVGVVTGTILSFELGMLWPEFMGTFGDVFGLGFAIEG-FAFFLEAIFIAIYVYGWDRLP 137 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL-NPVAQ 181 H + + L A ++ NGWM NP F V E + N Sbjct: 138 PKWHFASGFPIVFTGVLGATMVIAVNGWMNNPGG--FRLVNGEAVDVKPWEALFGNSFFW 195 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK-GRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 + VH + Y+ + + AW L+ GR + + + AI + A +++GD Sbjct: 196 HEVVHMYVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVGDW 255 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 + E+ Q KLAAIE T + A+ +FG D++ + I+IP L ++A Sbjct: 256 AAREVAVHQPVKLAAIEGLQRT-TSGASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFHDP 314 Query: 301 DTPVIGLKELMVQHEERIRNGMK-AYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V GL + + N ++ A+ + + SG AV +K Sbjct: 315 NATVRGLDSVPPEDRPGPINTVRFAFQAMVLIGSGLAMLAVFVLLVRWRKG--------- 365 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 R+ + +R +V G Sbjct: 366 ----------------------RLPRSVWFYRALVLAG---------------------- 381 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 A+ + W E GRQPW + V+ T A + AG + L+ Sbjct: 382 ----PGAVVALICGW-------ITTEVGRQPWVVYNVMRTDEAVTG--AGGVPVGYGLLA 428 Query: 480 GLYTLFLVAELFLMFKFAR 498 +Y LVA +++ + AR Sbjct: 429 LVYVGLLVAVWWILRRLAR 447 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 294 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 120/426 (28%), Positives = 187/426 (43%), Gaps = 73/426 (17%) Query: 96 LAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI 155 E L AFF+E+ +G+ FGW R+ K H + + G LSA WIL AN WMQ P Sbjct: 2 FTYEVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTPD 61 Query: 156 ASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF 215 N+ + E+ S+ ++ NP +++H + + Y++ M ILG+SA+Y++K + +F Sbjct: 62 G--VNYVNSKFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSF 119 Query: 216 AKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP 275 AK + + +S +++GD+ G E+ + Q K AAIE W+TQ A LF P Sbjct: 120 AKTCIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYP 178 Query: 276 DQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGS 335 + +E N FAI+IP +I T +D +IGLK + + + Sbjct: 179 SEAQEKNLFAIEIPKLASLINTHELDGELIGLKSVPEKDRPVVAV--------------- 223 Query: 336 TDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVA 395 F S + +G G L+ I++ Sbjct: 224 -------VFYSFRIMVGIGTLM----------------------------------ILIG 242 Query: 396 C-GFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 G LLLA R +I KW L+ PL ++A GWF AE+GRQPW + Sbjct: 243 LVGTLLLA----------RKKIESSKWFLKLCTLTTPLGFVATITGWFTAEFGRQPWVVY 292 Query: 455 EVLPTAVANSSLTAGDLIFSMVLICGLYTLFL-VAELFLMFKFARLGPSSLKTGR--YHF 511 +L T + S L+ + S+ I +Y + +F+ GPS+ R Y + Sbjct: 293 NILRTEYSVSDLSFWQVFSSLASIIIVYFIIFGYFYFKYLFRIINGGPSTDGEERMPYSY 352 Query: 512 EQSSTT 517 QS Sbjct: 353 FQSVEK 358 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 121/331 (36%), Positives = 171/331 (51%), Gaps = 3/331 (0%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA H L LT+G+A +A +E + +G+ +Y+ ++ FW ++F + Sbjct: 4 IDALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG R+ Sbjct: 64 SFGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H LVALG+ LS+ WIL N WMQ P F R S ++L+P Sbjct: 124 PQWAHALAAALVALGTLLSSFWILAVNSWMQTPSGYRF--VDGRFYPESIVAVLLSPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + HTV + VT A +LG A Y+L R A ++ +A F AV I LGD Sbjct: 182 YRLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKMALGFLAIAVPVQIALGDAH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q KLAA+E W+T A TLF IPD ETN+F + IP + T + Sbjct: 242 GLNTLAHQPVKLAAMEGLWDTGRGVRA-TLFAIPDGARETNRFELAIPTLGSLYLTHDPN 300 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLR 332 V GLK+ + A+ L+ L Sbjct: 301 GLVRGLKDWPRDERPPVAVVFFAFRLMVGLG 331 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 350 DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFW 409 +L L Y + + ++ +D P VA ++FAFR+MV G ++LAI+ Sbjct: 284 ELAIPTLGSLYLTHDPNGLVRGLKDWPRDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLT 343 Query: 410 SVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVAN-SSLTA 468 R+ ++ L P+ ++AV AGW E GRQPW + ++ TA + SLT Sbjct: 344 LWRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTT 403 Query: 469 GDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 D+ S+ Y A L+ + RLGP Sbjct: 404 TDVALSLAAYVLCYLAMFGAGFVLLLRLVRLGPP 437 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 112/471 (23%), Positives = 189/471 (40%), Gaps = 77/471 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D V L+R F + +H +F L +G+ ++ + E + ++ + Y + K W K I Sbjct: 1 MDNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + +G + W Y VG + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + VALG+ SA+ I A+ WM P F++ + V E V NP Sbjct: 120 SPTMRIITVFFVALGATASAVLITDAHAWMNTPRG--FDYVDGVVSNVRPLEAVFNPSIY 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG----RDFAFAKRSFAIAASFGMAAVLSVIVL 237 V +H + S Y+TGA + ++A+ + +G R+ + K+ ++ + Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLMLSLGVALVMSFYTANN 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G ++ + + KLAA E +ETQ A + G PD E Sbjct: 238 GHDTAIMLHEEIPVKLAAAEGLFETQ-DNAPLAILGTPDPEAG----------------- 279 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 R+ G++ +L L +GST Sbjct: 280 -------------------RVIGGIEIPGMLSWLATGST--------------------- 299 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 D + +D P + ++ F +MV G +LL + + + R Sbjct: 300 --------DGVVQGLNDFPRDEWPPL-FVHTLFNVMVGIGTVLLGLAGIFWVIWFLGRKK 350 Query: 418 EK---KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS 465 +K KWLL A + PL I +E GW + GRQPW I V TA A ++ Sbjct: 351 QKAFPKWLLGALILCGPLSMIGIETGWIFSCTGRQPWTIFGVQRTAEAATN 401 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 118/468 (25%), Positives = 199/468 (42%), Gaps = 68/468 (14%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL 71 A + +H +F L +GM LLA + +++ + + Y+ + K W + + FA+G +G Sbjct: 1 MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT 60 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F+ G W + H+ G G +EG AFF E+ F+GL+ +G +R+ V H Sbjct: 61 GIAFELGLLWPEFMHFAGSTVGPAFTLEG-YAFFTEAIFIGLYLYGRERMRPVAHWLTAV 119 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 VA+ S+ + AN W QNP+ + E ++ + +NP V VH+ + Sbjct: 120 AVAVSGAASSFLVTAANAWQQNPVG--VDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIAC 177 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKT 251 Y + G+ AW ML+GR +++ IA + G+ A +++ + GD S + Q Sbjct: 178 YAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPE 237 Query: 252 KLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELM 311 KLAA+EA + TQ A A + G+P+ EE T A+ +P L +A +D V GL + Sbjct: 238 KLAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVP 296 Query: 312 VQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQ 371 Q + ++ L+ +G G+ + A + Sbjct: 297 RQEWPNVPLVHISFQLM----------------------VGAGIAMVLVGLYYAWVRWRR 334 Query: 372 IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIP 431 +Q +D W + P Sbjct: 335 PEQVPRDRR--------------------------LLWL---------------LVLSSP 353 Query: 432 LPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 L ++A+EAGW V+E GRQPW I +V+ TA A + + + SM Sbjct: 354 LGYLALEAGWIVSETGRQPWTIWKVMLTADAVTP-SGSTMALSMAGFT 400 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 106/500 (21%), Positives = 193/500 (38%), Gaps = 70/500 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ + +R Q L+ +H +F + + ++ I + ++ +G + Y + +K K I Sbjct: 1 MNSLLYARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + G++ G P ++EG AFF E+ F+G++ +G +L Sbjct: 61 LFAVGAVSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEG-FAFFTEAIFLGIYLYGRGKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ LVAL LSA ++++ N M +P F R + + +P + Sbjct: 120 SPRLHLLSGALVALSGALSAFFVILVNACMNDPAG--FTMVDGRPANIDPVAAMFSPPWK 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + + Y A + GI A +L+ +++FA+ + L+ ++G + Sbjct: 178 HETLHGILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAVTLAIAGVTALAQPLVGHYA 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 E+G Q KLAA+EA +ET A A + G+PD E +AI+IP L + D Sbjct: 238 AVEVGRGQPAKLAAMEAHFET-SARAPLLVGGLPDVERGEVDYAIEIPAGLSVFLHADPD 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL + + ++ ++ S AV Sbjct: 297 AVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAV--------------------- 335 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + IP P +A + G + Sbjct: 336 -------VGAVLAWRRRGIPDQRPFLWAAILASPLGIV---------------------- 366 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 + W+ E G RQPW + + T A + L L Sbjct: 367 -------AMEAGWLVTELG-------RQPWIVRGAMRTRDAVTPFP--HLAAPFWTFTAL 410 Query: 482 YTLFLVAELFLMFKFARLGP 501 Y V ++L+ + R P Sbjct: 411 YVFLGVVVVYLLVRQLRAAP 430 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 113/463 (24%), Positives = 184/463 (39%), Gaps = 74/463 (15%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V LSRL LT +H +F + +G+ ++ E + + Y + + W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 A+GV TG + Q W G PL +E AFF E+ F+G++ + WDR Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFMET-FAFFFEAIFLGIYLYTWDRFK 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + V +G+ LSA +I N +M +P F + + + + N Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSPEG--FKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-----DFAFAKRSFAIAASFGMAAVLSVIV 236 K H + S Y+T A + I+A+++L+ + + A+ K++ + G+ S + Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 +GD SG + Q KLAA E +ET A +FG Sbjct: 241 VGDFSGKYLAKYQPEKLAAAEWHFETT--NEAELIFG----------------------- 275 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 G+ + I+ +K L L G+ D V K+D Sbjct: 276 ---------GILDEQADGSYEIKGAVKIPYALSILAGGAPDTEVIGLNEFAKEDQAPLF- 325 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 +++ F IMV+ G L AI AL + ++ Sbjct: 326 -----------------------------VHYFFDIMVSIGMYLAAISALFILAFRLKKL 356 Query: 417 GE-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLP 458 KWLLR G PL +++EAGW AE GRQPW + ++ Sbjct: 357 NPYNKWLLRGIFIGGPLAIVSIEAGWMYAEIGRQPWTLYGIMR 399 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 151/268 (56%), Positives = 192/268 (71%), Gaps = 2/268 (0%) Query: 251 TKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKEL 310 KLAAIE+EWETQPAPA+FTL GIP+Q+EE +AI+IPYALG+IATRS+D PVIGL+EL Sbjct: 1 MKLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLREL 60 Query: 311 MVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEA 370 EE I++GM AY L++++ G T +A R F+ K+ LGYGL+LK++TPNV DAT Sbjct: 61 AKLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPE 120 Query: 371 QIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI--GEKKWLLRAALY 428 QI+ A K +IP VAP++F+FRIMVA GFL +A +FW R + ++W LR A++ Sbjct: 121 QIKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVW 180 Query: 429 GIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVA 488 IPLPWIA+E GW VAE GRQPW I VLPT ++ SSL DL S+ YT V Sbjct: 181 AIPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVI 240 Query: 489 ELFLMFKFARLGPSSLKTGRYHFEQSST 516 E+ LMFK+ARLGPSSL TGRYH E ++ Sbjct: 241 EIKLMFKYARLGPSSLHTGRYHHEIAAA 268 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 82/327 (25%), Positives = 155/327 (47%), Gaps = 4/327 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R ++ +H ++ + +G+ LL + E + + +G + + ++ + W + + Sbjct: 1 MDDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G + G ++EG AFF E+ F+ L+ +G RL Sbjct: 61 LFAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEG-FAFFTEAIFLALYSYGEQRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + T + + S +SA++++ ANGWM P F + N Sbjct: 120 SRRAQFFCTVPMVVASAISAVFVISANGWMNTPSG--FRMVNGVASDIHPLVAFANQAWP 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + VH + YV + G A +L+GR K++ ++ + G A+ +++ GD + Sbjct: 178 HQAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPLMLMSGDWA 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + + QK KLAA EA ++T A A + G PD E T ++AI+IP L +A + Sbjct: 238 AEALAEHQKAKLAAAEAHFKTMAA-APLVIGGWPDPETGTVRYAIKIPKLLSYLANGDAN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLL 328 + V GL + R + L+ Sbjct: 297 SVVQGLDAFPLGSTPDPRIVHPFFDLM 323 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 146/510 (28%), Positives = 215/510 (42%), Gaps = 82/510 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 +DI++L+RLQFA+T H+LFV LTLG+ L+AIM+T + + ++ MT+FWG+ Sbjct: 1 MDILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 ++ IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FG Sbjct: 61 IYVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL H+ + WLV + SA W+LVANG+MQ P+ S + F L+ N Sbjct: 121 WDRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVV--RDGVAYLTDFGALLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P A V H + +TG +F+ G+SA ++ +GR+ + V Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGRED--FRGPLRTGVLVAAVVTFPVYAA 236 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + Q K A ++ P I + Y LGI+A Sbjct: 237 GGLQYPIIAATQPAKTAMMD----------------EPGWVLWGQYVMIGLGYLLGILAL 280 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + L+V E +R + A + + + FN G LL Sbjct: 281 AAF---------LVVFREPLLRRRLPAVVAVALTAYPAGEYFGGFLFNEPGPYRGPIYLL 331 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 L + A+ + + Sbjct: 332 -----------------------------------------WFLIMGAVLLSRPVGPLLR 350 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMV 476 L+ L WI+ E G RQPW + L TA A + LT +I S+ Sbjct: 351 LLPILIPLPLVASLGGWISREIG-------RQPWIVYGRLTTAQALSPGLTRTMIISSLA 403 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKT 506 + V L+ + AR G T Sbjct: 404 GFVVVLGALAVTNWVLIARTARRGLEPAPT 433 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 101/492 (20%), Positives = 176/492 (35%), Gaps = 65/492 (13%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +R A T H L VP + + F+ +M + + + + W + + FA Sbjct: 16 LLPARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFA 75 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G+ TG + F+FG W GD+FG +E AFFLE+ + ++ +GW RL Sbjct: 76 IGIITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPW 134 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H + + L + + A I+ AN WM P + + + V + + P+ ++ Sbjct: 135 THFWLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQ-GKPIHVDVRQAIFTPMFGPEY 193 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H V + +T + G+ A L+GR + + F + + +LGD + Sbjct: 194 WHFVVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTLPFTVAAILTPVQFMLGDSAARA 253 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q K AA E W+T +FG + + T ++IP I+A T V Sbjct: 254 VFHKQPIKFAATEIVWKTDT-HVPEYMFGRLNSD-GTISGGLKIPQLDSILAGFKPSTQV 311 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 GL + A+ + + G LL + Sbjct: 312 TGLTSVPASDRPTAVQATIAH-------------------WAFDIMVTIGSLL------I 346 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 A P + +R G Sbjct: 347 LLALWYAWSWWRHRDNP---GSRWFYRCAALAGL-------------------------- 377 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTL 484 A L + WI E GRQPW + + + + A +S AG L + ++ +Y Sbjct: 378 ACLVTVECGWI-------TTEVGRQPWIVYQHMRVSEAVTSTRAGSLWAMLGIVVVVYVA 430 Query: 485 FLVAELFLMFKF 496 + A L ++ K Sbjct: 431 VIGAFLAVVLKM 442 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 20/335 (5%) Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 HTV ++T +F +G+ A+Y++K R AK F AA+F + A ++ +++GD GYE+ Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVI 305 Q KLA +E ++ET+ A+ LFGI DQE + ++ ++IP L ++ + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVA 365 G+ EL+ ++ + + +LEQ + + + + Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQAQTPEEKQKIKDQLAEA-------------- 165 Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 +A + +P + ++ F +MV GF + I L++W + + + K L Sbjct: 166 -KVKAHAFNIKYEDLPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKGFLWL 224 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLF 485 + IPLP++A GW AE GRQPW + +L T S + A + S+ + +YT+F Sbjct: 225 LVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTIYTIF 284 Query: 486 LVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 + L+L+FK GP+ E+S P Sbjct: 285 FIVFLYLIFKTIGKGPNITT----AKEESVPPVNP 315 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 156/260 (60%), Gaps = 4/260 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++L+RLQF +TA HFLFV LTLG+A ++A+M T +V +G + + MT+FWG+++ + Sbjct: 1 MDVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+ALG+ TGL MEFQFG +WS +HY GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 61 NYALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+V L + SA WI+VAN ++QNP + + R+ + L+ N Sbjct: 121 PRRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVTGD--RLALTDAGALLTNKALV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK--GRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 F H + +G TGA ++G SA+ + + G D RS + V + G Sbjct: 179 FSFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVLAVHGVPIAVAFGF 238 Query: 240 ESGYEMGDVQKTKLAAIEAE 259 + + + AA Sbjct: 239 AQFATVPEGKFDGAAASTGL 258 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 +M+ G LL L +I+ + +W + PLP+ A GW E GR PW Sbjct: 260 VMILIGEALLMATLLFLLPLIK-VLPHWRWTHPLLMALTPLPFAAAILGWIAREMGRYPW 318 Query: 452 AIGEVLPTAVA-NSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARL 499 I + L A A + LT G + S+ + TL V + L+ K R Sbjct: 319 MIRDRLTVADALSPGLTPGMITASLAGFTTVLTLLAVIDYALIAKIVRR 367 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 107/261 (40%), Positives = 164/261 (62%), Gaps = 6/261 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+RLQFALTA HFLFV LTLG+A L+A+M+T L+G ++ MT+FWG+L+ I Sbjct: 1 METLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+A+G+ TGL MEFQFG W+ +H+ G++ GA LA+E L+AFF+ESTF+GL+ FGWDRL Sbjct: 61 NYAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ V W+V L + SA WI+V+NG++QNP+ ++ + + + ++ NP A Sbjct: 121 NRWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEVA--GGVLRLTDAAAVLANPAAI 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F H + + F+ G+SA ++ KG + F +RS I + AV++ LG Sbjct: 179 TAFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALG-- 236 Query: 241 SGYEMGDVQKTKLAAIEAEWE 261 G + Q K+A E Sbjct: 237 -GAQFDTAQPMKIAVYAGRTE 256 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 1/211 (0%) Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 ++ V E+ + L + A+ + + Sbjct: 187 GALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALGGAQFDTAQPM 246 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL-SFWS 410 + R E D IP + + M+ L++A+ L + + Sbjct: 247 KIAVYAGRTEEVARLQAEMVAAHGPGDYIPPAGLVQGSGTAMMIIFALMMAVAWLSALLA 306 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGD 470 + + + IPLP+ A+ AGW E GRQPW + +L T A S L+ G Sbjct: 307 LFPRAVHRLRIWHVLLTAMIPLPFAAMLAGWVFREVGRQPWTVYGLLTTEDALSDLSPGA 366 Query: 471 LIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 + FS+ L+ L +V +L+ + AR GP Sbjct: 367 IRFSLAAFTLLFGLLVVVNTWLLARNARQGP 397 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 101/504 (20%), Positives = 202/504 (40%), Gaps = 49/504 (9%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M+++V + H L V + + + +++I E V + ++Y + K Sbjct: 1 MVNLVLFDAGLMGYSLAVHILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALI 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I FA+G A+G+ + + W + +G + PL +E + AFF E+ F+G++ + W++ Sbjct: 61 IFFAVGTASGVVVAIELFVLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNK 119 Query: 121 L-GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFE--TMRMEMVSFSELVLN 177 +++H ++ +A+G+ +S ++I + N +M P + + T ++ V+ ++ Sbjct: 120 FKSRMKHWLLSVFIAIGAVMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNT 179 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYML--KGRDFAFAKRSFAIAASFGMAAVLSVI 235 P V+ H + S GA F L A+ +L KG + + K++ IAA+ + +++ + Sbjct: 180 PTTWVEIGHVIGSTIFAGAAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTV 239 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 ++G ES ++ Q K AA+E + + P A + G +I IP + + Sbjct: 240 IIGIESITDLMLYQPEKFAALEMNFNSGPHVA-EVIGGF--LVNNKTVDSINIPGLMSFL 296 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 AT S + + L ST V N+ +G G+ Sbjct: 297 ATGSFNGAIASNDSLAA-------------------YPKSTWPPVAVVHNTFDIMVGIGV 337 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 L+ I++ + I + Sbjct: 338 LIGVVMIIFLLIWLLNIRKIRDKFESN-------------------HFFNKILSNKIFSD 378 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 + +L+ + L +E GW E GRQPW I V+ + A + T+ ++ Sbjct: 379 PFDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAAAN--TSPSIVPIG 436 Query: 476 VLICGLYTLFLVAELFLMFKFARL 499 + I Y + L A L + + Sbjct: 437 IAIIAFYIVVLPATLLFVRNVIKK 460 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 95/255 (37%), Positives = 151/255 (59%), Gaps = 5/255 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 + V+++RLQFA+T H++FV +TLG+ +L ++T L+ + + MT++WG Sbjct: 1 MTAVDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGL 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 ++ IN+++G+A+G+ MEFQFGTNWS SH VGD+FGAPLA+E L+AF ESTF+ L+ FG Sbjct: 61 IYVINYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 W +L H + WLVA + SA W+LVANG+MQNP + + R + S + L N Sbjct: 121 WGKLPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNN 179 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P FVH + + G + ++ +SA ++ + ++ F RSF + G+ ++ Sbjct: 180 PSTIWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGLFGMIWAFGT 239 Query: 238 GDESGYEMGDVQKTK 252 G + +Q K Sbjct: 240 GWAQYGFVNQIQPAK 254 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Query: 389 AFRIMVACGFL----LLAIIALSFWSVIRNRIGEKKWLLRAALY-GIPLPWIAVEAGWFV 443 AF IM+ L +L + + W ++ K W + +P P+ A AGW Sbjct: 265 AFHIMMLTAELATPIMLLLSPIVIW-----KLPAKLWFFMPLFWLALPFPFAAAIAGWVF 319 Query: 444 AEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 E GRQPW + V T A S + L S L L L L+ +L+ + A GP+ Sbjct: 320 REMGRQPWIVYGVQKTEDAVSDIGVTTLWTSFWLFTVLLGLLLLTNWWLITRHAVRGPN 378 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 95/509 (18%), Positives = 184/509 (36%), Gaps = 88/509 (17%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVAT 69 FA T H LFV L++ +A + I E + + + Y + K I FA+G A+ Sbjct: 11 AMFAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTAS 70 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMC 128 G M + W + VG + P +E + +F LE+ + ++ + W D + +H Sbjct: 71 GTVMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWA 129 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVS--FSELVLNPVAQVKFVH 186 ++ V +G+ LSA + N WM P + + + +++ P + +H Sbjct: 130 LSLAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELH 189 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAF---AKRSFAIAASFGMAAVLSVIVLGDESGY 243 + Y G + ILG A+ LK + + +R I A F + ++ + G Sbjct: 190 MSGAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVFAILDIIYLGATGSNELS 249 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 + ++ K AA+E + A +FG+ + + +P A ++A Sbjct: 250 TLLVIEPLKYAALEQDMVPVTYGAPEHIFGVI--INGHPAYYVNLPLAQSLLAY------ 301 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 G L S + +++ +G+G+L+ Sbjct: 302 -------------PFTFGHGYIPGLSSYPSSVWPPSF--VHDTLDLMVGFGILM------ 340 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423 GF L ++ + F ++ + +L Sbjct: 341 ---------------------------------GFFWLIVVIMYF---MKKDPLSRPLIL 364 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWA------------IGEVLPTAVANSSLTAGDL 471 + + L + +E GW+ AE GR P+ + V+ A S+ + Sbjct: 365 KLTMAVAVLGVLTMEDGWYTAEVGRVPFIIKAPVGGTGIPGVYGVMTIGQAASTSP---V 421 Query: 472 IFSM-VLICGLYTLFLVAELFLMFKFARL 499 +F + + I Y + L + FK +L Sbjct: 422 VFPLGIAIIIFYIVLLPLTFYYAFKVMKL 450 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 89/253 (35%), Positives = 132/253 (52%), Gaps = 3/253 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + D + L+RLQFALTA H++FV LTLG+A L + V L G + +FWG L+ Sbjct: 2 LEDPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYL 61 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +N+ +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGWDR Sbjct: 62 VNYGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDR 121 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G+ H+ +V + SA W+LV+NG+++NP+ F + L+ NP A Sbjct: 122 MGRWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAA 179 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFA-FAKRSFAIAASFGMAAVLSVIVLGD 239 + F H V + GA+ + SA+++++ D +R A + V G Sbjct: 180 VLAFGHIVTGSLLVGALVVAATSAYHLVRRDDAHGVFRRGIRHATLVLCVVPIPVAAFGG 239 Query: 240 ESGYEMGDVQKTK 252 G T Sbjct: 240 VQFGLFGQDPPTS 252 Score = 81.3 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 48/130 (36%) Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 +M+ L+ + L + + +W L + LP++A GW E RQPW Sbjct: 284 VMMTSWALVFLLGPLMLLAWPLGGLDRWRWFLAPLVVTPFLPYLASVGGWVFRETNRQPW 343 Query: 452 AIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHF 511 + L TA A + L+ + S + +L+ ++AR GP Sbjct: 344 TVVHHLTTADAVTPLSPVAAVASFGFFTAAFAALAAVTYWLLVRYARRGPEGGPLAEQRT 403 Query: 512 EQSSTTTQPA 521 + +P Sbjct: 404 QPPEGPAEPG 413 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 2/250 (0%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + +RLQFALT+ H++FV TLGMA L+ + + +L + +FWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + +GV +GL ME Q NWS + G +F APLA+E + AFF ESTF+GL+ FGWDR+ Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + H+ +V L + LSA W+LVANG+++NP+ F + LV NP A + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 F H S + G + + G+SA+++ +G D R + L + Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFPTPAAGGAQ 241 Query: 243 YEMGDVQKTK 252 Y + T Sbjct: 242 YSLAGAPPTS 251 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 5/219 (2%) Query: 286 IQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFN 345 + P AL A + ++G + +R G + + A F Sbjct: 174 VTNPAALLAFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFP 233 Query: 346 ---SMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLA 402 + ++ A A+I+ A +S +A + + F L+ Sbjct: 234 TPAAGGAQYSLAGAPPTSGLTLSSAEIAEIEAARPESTMVLAEVGNGVMTLCWTVFFLVL 293 Query: 403 IIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA 462 +AL W V R + +WL L +A AGW E GRQPWA+ + TA A Sbjct: 294 PVALLAWLVRR--LDRWRWLHWLLSVMPVLALLAGVAGWLYRELGRQPWAVWHHMTTAEA 351 Query: 463 NSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 + L+ + S V+ G + + +L+ ++AR GP Sbjct: 352 ITPLSVPHAVASFVVFTGAFAVLAGITWWLLVRYARRGP 390 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 93/508 (18%), Positives = 179/508 (35%), Gaps = 77/508 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++I RL FA + H L V +++G++ +L ++E + + Y +T+ K + Sbjct: 1 MNIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYIAIKYKDVYYDLLTRRVAKALVM 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G A+G M + + + + + P E + AFFLE+ + +++ WD Sbjct: 61 FFAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDVF 119 Query: 122 -GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL--NP 178 ++ H +T+ VA G+ SA++I + N WM P + ++ +++ + + P Sbjct: 120 KNRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFITALTP 179 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFA---FAKRSFAIAASFGMAAVLSVI 235 + H V G M + A+ L+ + + + M ++ Sbjct: 180 STGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKTEEAKTLYMKGLKVTFPMNMFLIIMAG 239 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEET--NKFAIQIPYALG 293 + G + Q K AA++ A LFG ++ I+IP+ Sbjct: 240 LSGTLEMSGLLTYQPEKYAALDLNPYPIARDAPEHLFGTIVEKNGHYYVLGGIKIPFVQS 299 Query: 294 IIA-TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLG 352 ++A +++TPV GL + S AV D F+ Sbjct: 300 LLAGNGNLNTPVPGLSQFP--------------------TSTWPPLAVHDTFD------- 332 Query: 353 YGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 L++ T I K Y + MVA + I + + Sbjct: 333 --LMVIGGTLLGLFLLSVLIAWILKKKP------YESKGFMVAQILFAILTIPIYIGGWV 384 Query: 413 RNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLI 472 + +G + W I V+ A + +I Sbjct: 385 TDEVGRQPW------------------------------IIYNVMTVYQAANYSP--SII 412 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLG 500 LI YT+ + + F+ + G Sbjct: 413 VPGYLIMAFYTILMPFSYWYAFRLMKQG 440 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 3/313 (0%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R+QF + + LF+ L L +++LL + +G + +FW + F ++F Sbjct: 5 PLLLARIQFTASLSFLALFMALALALSWLLLFFKLRAHRTGLPGWTAAYRFWVRFFALSF 64 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 L +A L + Q G+ W +G++ G + L F L+S F+G+ FG R+ + Sbjct: 65 VLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLSVFILKSCFLGVMLFGQRRVSE 124 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H ++VA+G ++ W+L W+Q P + R ++ + V NP Sbjct: 125 RVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGA--TLIDARYQVYDWYAAVFNPSLGWN 182 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 T + A ILG++A L+ + +F A +AA L + D +G Sbjct: 183 LGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKTALVVAVAASLLQAPVLDGAGR 242 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 M + Q K AA W + P +TLFG PD + N+ A+ +P A G R Sbjct: 243 VMAEHQPAKAAAAAGYWHSGAEPG-WTLFGWPDARAQANRAALALPGAGGAWLGRDAQGV 301 Query: 304 VIGLKELMVQHEE 316 GL + Sbjct: 302 YQGLDKFSGMRPP 314 Score = 43.1 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 3/130 (2%) Query: 380 IPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK---WLLRAALYGIPLPWIA 436 P VA ++A R+ + G +L + ++ R + + W LR + + + Sbjct: 312 RPPVALTFWALRVALLLGAAMLLVSCVTLALTARRGLDPAQLPAWWLRVIVGMLYAGGLT 371 Query: 437 VEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKF 496 V AG + G QP+A+ + + L S+ LY L L A ++F Sbjct: 372 VLAGGVFSLVGMQPYAVNAAITQTEVLGVTSTPTLAASLAGYLVLYGLLLAAFNGMLFHA 431 Query: 497 ARLGPSSLKT 506 AR G ++ Sbjct: 432 ARYGVVPVRK 441 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 94/519 (18%), Positives = 173/519 (33%), Gaps = 93/519 (17%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVAT 69 FA T H L V L++G+A + I E + + + Y + K I FA+G A+ Sbjct: 15 AMFAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTAS 74 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMC 128 G M + W + VG++ P +E + +F LE+ + ++ + W D + +H Sbjct: 75 GTVMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWG 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFN--FETMRMEMVSFSELVLNPVAQVKFVH 186 ++ V +G+ LSA + N WM P D T + V+ + + +H Sbjct: 134 LSLAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFITASTAAEELH 193 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAF---AKRSFAIAASFGMAAVLSVIVLGDESGY 243 + Y G ILG + LK + + +R I A F + ++ + + G Sbjct: 194 MSGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVFMILDIIYLGITGSNELS 253 Query: 244 EMGDVQKTKLAAIEAEWETQPAP-----AAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 + ++ K A+E + A +FG+ +A PY ++A Sbjct: 254 TLMVIEPIKYTALELDLHATIGTSFATMAPEHIFGV--LINHKLAYAPSFPYIQSLLA-- 309 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQF---NSMKKDLGYGL 355 G + G TD V + +++ +G+G+ Sbjct: 310 ---------------FPLTFGKGSIPGLIPLTTYKGVTDYGVWPPYIVHDTLDLMVGFGV 354 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 L+ Y + + FR + Sbjct: 355 LMGLY---------------------WLYVVVQYFR---------------------KKD 372 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI---------------GEVLPTA 460 ++ L + + +E GW+ AE GR P+ I + A Sbjct: 373 PLSHRFTLLGGIAVAIMGVFTMEDGWYTAEVGRVPYIIRSPVPGGFVVDGVKHYGTMTIA 432 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARL 499 A S+ + + I Y + K +L Sbjct: 433 QAASTSPLVFPLG--IAIIIFYLAVFPLTFYFAGKVMKL 469 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 97/548 (17%), Positives = 178/548 (32%), Gaps = 95/548 (17%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 ++ L R AL +H +++ LT G+ + +M + +G ++Y + + Sbjct: 60 IMPNPNLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLA 119 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFALG TG +EF W + + PLA+E L+AF E F+ LF R Sbjct: 120 VNFALGAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGR 178 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN-------------------- 160 + + + A + LS + I N WMQ P Sbjct: 179 VRPPVSIAILAAYAGFAYLSGVLITTVNSWMQAPWGVGPVAKALYPFMPEYGPNVVDVQK 238 Query: 161 ------------------------FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGA 196 ET+ + + + + +P A V H + + + G Sbjct: 239 LVALKLAAVATGSPISLIIEKPGFAETVGIVLKDPNVALYSPYALVSMFHNILAAILIGM 298 Query: 197 MFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAI 256 A+ K + + K +A +F + V+ ++ G + + TK A + Sbjct: 299 AVATAGWAYKYFKTGNEEYLKIVKPLAGAFAVIFVIQAPIVAHFMGEMVVEYNPTKFALM 358 Query: 257 EAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEE 316 E T P + ++A + P++G + Sbjct: 359 EGAVTTFNDP------------------------IIALVAYGDPNKPIVGFDQFEK---- 390 Query: 317 RIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQAT 376 + L + D A ++ + G + L Q Sbjct: 391 ---------ACLSHGNATVGDLAKTLGIPTVLQLAGQTVDLNGIASLKLSDLCLADLQKA 441 Query: 377 KDSIPRVAPLYFAFRIMVACGFLLLAIIALSFW----------SVIRNRIGEKKWLLRAA 426 +P V Y+ G L A++ F+ ++ R E++ + A Sbjct: 442 MSYMPLVHTTYYVKVAFAIIGGLAAAVLLFYFYKVPGLSSLAAAIARILGDERRRVFILA 501 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 L + I GW V E GR+PW + +L + + + S + Y + L Sbjct: 502 LLLVLGTVIPAVGGWAVREIGRKPWTVYGLLYPSEVVTPVP---YATSPGFLAVTYLVIL 558 Query: 487 VAELFLMF 494 L +F Sbjct: 559 AVNLGGLF 566 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 4/207 (1%) Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLR----SGSTDQAVRDQFNSM 347 +G+I TRS+ + + G+ +L+ + E+ IRNG++AY LE +R +G + F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 LGY LLLKRY + AT+AQI QA D++P V PL++AFRIMV G +A+ A Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 FW +R R+ W+L+ A+ IPLPWIA E GW VAE GRQPW I VLPTA+A S+L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMF 494 AG L+ ++ +Y++ V E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLMI 207 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Query: 36 METVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAP 95 ME +++ + +IY + KFW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI 155 + +E + AFFLE+ F+G+ FGW R H+ T LV LG++ SA WIL N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTPD 120 Query: 156 ASDFNFETMRMEMVSFSEL 174 + + + + ++ Sbjct: 121 G--ISVIDGSIRIHDWLKI 137 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 CGLYTLFLVAEL 490 CGLYTLFLVAEL Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 104/278 (37%), Gaps = 67/278 (24%) Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD G Q TK+AA+E WET+ A LF PDQ+ E N + I+IP +I T Sbjct: 1 GDRHGLNTLKHQPTKIAAMEGIWETEKG-AGLLLFAYPDQQNEINHYEIKIPNLASLILT 59 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 V GLKE + + F S + +G G+L Sbjct: 60 HDFLGEVKGLKEWKKEDRPPVVW----------------------VFWSFRVMVGVGIL- 96 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 M+ G +S +R ++ Sbjct: 97 -----------------------------------MIIIGS-------VSVIQYLRGKLF 114 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMV 476 + +L + +P +IA+ AGWF E GRQP+ + ++ T + +S++T + +S++ Sbjct: 115 QSCFLHGWWISMMPSGFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLI 174 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS 514 +YTL A + + K G +K ++ Sbjct: 175 AFIVMYTLIFGAGSYYILKLIYKGIPVIKEEEQFYKHG 212 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 110/352 (31%), Gaps = 64/352 (18%) Query: 145 LVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISA 204 + AN WM P + + V V P+ ++ H V +T + G+ A Sbjct: 1 MAANAWMNTPRGFTLDA-SGNPVNVDVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQP 264 +L GR + + F + S +LGD + Q K AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTVPFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKTGT 119 Query: 265 APAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKA 324 +FG + + I+IP I+A SV+T V GL + A Sbjct: 120 -HMPEYMFGRLRSD-GSISGGIKIPQLDSILAGFSVNTKVTGLSSVPASDRPTATQATIA 177 Query: 325 YSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVA 384 + + + G LL V A +PR Sbjct: 178 H-------------------WAFDIMVTIGSLL------VLLALWYGWCWLRHRGLPRSP 212 Query: 385 PLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVA 444 + R A + VE GW Sbjct: 213 WFF------------------------------------RCAAVAGAACLLTVECGWITT 236 Query: 445 EYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKF 496 E GRQPW + + + + A + A L + ++ +Y L L A L ++ K Sbjct: 237 EVGRQPWIVYQNMRVSEAVTDTRASSLWAMLGIVVVVYVLVLGAFLAVLLKM 288 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 102/285 (35%), Gaps = 16/285 (5%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++ +R A+ + H LG + I E +Y++ + + D + + + I Sbjct: 13 STLDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIF 72 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 F +G A G +EF T WS + +G P +E L AF E + L+ F W ++ Sbjct: 73 FGVGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTWGKVR 131 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWM---------QNPIASDFNFETMRMEMVSFS 172 H + A G SA IL + QN AS+ + +V+++ Sbjct: 132 NGWVHWVIGLAAAFGGYWSAYNILAVMASLSMRPPGMIIQNLAASNETIAGLTSYLVTWA 191 Query: 173 EL--VLNPVAQVK---FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFG 227 + N H + + + + I + ++ AK I Sbjct: 192 KPTDAWNMFWWGANVFIFHGILAAAILTWSVVGAIYLYGYVREHRPDQAKVLKVIIPGVA 251 Query: 228 MAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLF 272 + + +LG + G + KLAAIE + F Sbjct: 252 VMTAIEGFILGHDQGELVLQFDPLKLAAIEGMFWKGLKVDPLLSF 296 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%) Query: 151 MQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG 210 M P F + +M V E + NP V+ H + + +T A I I+A+ +L+ Sbjct: 1 MNTPAG--FELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 R---DFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPA 267 R D + K++ ++ G + L ++ GD S + Q KLAA E ++T + A Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDT-SSHA 117 Query: 268 AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERI 318 LFG+ D++ + K AI++P L +A SV T V GL + + Sbjct: 118 KLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPM 168 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 3/158 (1%) Query: 9 RLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVA 68 R+ + H+ + +G++FL I +Y + + ++ + K F I FA+G A Sbjct: 17 RVLSLIGIEAHWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVFAVGAA 76 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG EF W + G PL E + AF LE F+ L ++GW + GK + Sbjct: 77 TGTASEFGLVLLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGKSAMVV 135 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASD--FNFETM 164 + +L +G SA I+ N +M P ++ T Sbjct: 136 LLFLSFIGPWYSAAMIVSVNSYMVAPTGIVPAYDPNTG 173 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 87/328 (26%), Gaps = 74/328 (22%) Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISA-----WYMLKGRDFAFAKRSFAIAASFGMAAV 231 +PV +H + + + I+ A + + +F AA + + Sbjct: 287 SPVYLASILHVIGAALTVSSFTIMAAYAMRIKSYGKSPKEYKDYVNAAFKFAAVSALVTI 346 Query: 232 LSVIVL-GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPY 290 + G E G + K AA+EA + G Sbjct: 347 AIQGFVFGHEMGTSIAHYNPEKFAAMEATTDQITPVTKILPGGE---------------K 391 Query: 291 ALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKD 350 + ++A + P+ ++ + Sbjct: 392 LVALLAYGDPNAPLPNYDKIPSDY------------------------------------ 415 Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 Q A S +++ + G L+ + Sbjct: 416 -------------CFFPATLQEDAARIGSCKPPLIIHYLYYAKTGLGILMGLYALAIVFY 462 Query: 411 VIRNRIGEK--KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLP--TAVANSSL 466 + R + EK +WLL A I + GW V E GR+PW I V+ A + Sbjct: 463 LWRTKDPEKTPRWLLSVAPLSIIIIQFVSFLGWAVREIGRKPWTIYGVMTPDVAHTVNPP 522 Query: 467 TAGDLIFSMVLICGLYTLFLVAELFLMF 494 + G + + + + ++ Sbjct: 523 SVGAVTLVAIFFLAILAALGYSVYRFLW 550 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 65/145 (44%), Positives = 97/145 (66%) Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 S YE+ +Q KLAA+E EW+T+PAPA F L P QE+E N FA++IP LGI+AT S Sbjct: 1 SSAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHS 60 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 +DTPV GLK LM R++ G +A+ L++++ G+ V + F++++ DLGYG+LL + Sbjct: 61 LDTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAK 120 Query: 360 YTPNVADATEAQIQQATKDSIPRVA 384 Y P++ T Q + A + +IP+VA Sbjct: 121 YAPDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 2/136 (1%) Query: 170 SFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMA 229 ++ +V NP + VH + ++ A F+ G++AW++L+ R+ A+ +++ + Sbjct: 2 NWWAIVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALL 61 Query: 230 AVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQ--PAPAAFTLFGIPDQEEETNKFAIQ 287 A ++ GD G + Q ++AA+E +W+ + + LF IPD E N + + Sbjct: 62 AAPLQLLAGDRQGENTLEHQPQRVAAMEGDWDARAPGSGEPMVLFAIPDMRERRNHYEVS 121 Query: 288 IPYALGIIATRSVDTP 303 IP + ++ Sbjct: 122 IPRVASLYLRHNLSGV 137 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 69/76 (90%), Positives = 73/76 (96%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQ 76 MYHFLFVPLTLG++FLLAIM T YVL+GKQIYKDMTKFWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSYYSHYVGDIF 92 FGTNWSYYSHYVGDIF Sbjct: 61 FGTNWSYYSHYVGDIF 76 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 7/155 (4%) Query: 368 TEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAAL 427 + +++ P V ++++FR+MV+ G L+L + S + + ++ E L R AL Sbjct: 48 PLNGLDTVPRENWPPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHRFAL 107 Query: 428 YGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLV 487 P ++AV AGW E GRQP+ + +L TA + S L+ + S++ +Y Sbjct: 108 TMGPAGFVAVVAGWITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIYFAVFG 167 Query: 488 AELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 + + P Y E P R Sbjct: 168 MGVLYILHLMAKSP-------YRGEHGIEPGAPIR 195 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Query: 403 IIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV------ 456 + W R RI ++KW R L +P P++A +GW E GRQPW + Sbjct: 10 LALAGLWVTRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWVVVPNPNGDQS 69 Query: 457 --LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 L A A S + + FS+V +Y + + L+ ++ GP Sbjct: 70 IRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 51/82 (62%), Positives = 68/82 (82%) Query: 435 IAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMF 494 + +E GWF+AEYGRQPWAI E+LP V+ S+L+ GDL FS+ LIC LY F++ E++LMF Sbjct: 1 MPIECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMF 60 Query: 495 KFARLGPSSLKTGRYHFEQSST 516 K+ARLGPS+LKTG+Y+FEQS+ Sbjct: 61 KYARLGPSALKTGKYYFEQSAK 82 >UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome bd quinol oxidase (CydA) n=2 Tax=Bacteria RepID=Q1PZE5_9BACT Length = 699 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 97/255 (38%), Gaps = 19/255 (7%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR+ + + H +F LG+ I+E V SG Y M K + KL FA Sbjct: 97 SRVVVWIVSELHLMFAAFVLGVPIFAVIVEIVGFKSGDIKYDKMAKEFTKLLSAAFATTA 156 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL-----G 122 + G + F + + ++ +F + + LM FF E+ + +++ WD L Sbjct: 157 SLGGLLAFCLFGLYPEFMSHLTSVFAPTMYVYSLM-FFGEAFTLYGYYYSWDVLKGTSTK 215 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGW---MQNPIASDFNFETMRMEMVSFSELVLNPV 179 K H+ + ++ L ++I N W M +P + +T R ++S E N + Sbjct: 216 KWCHIALGIMLNLFGT-GLMFIT--NSWATYMMSPSG--VSMKTGR--LLSLYEAFYNEL 268 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLK---GRDFAFAKRSFAIAASFGMAAVLSVIV 236 +H + + G + +A L + A + G+ A++ + Sbjct: 269 WMPVNLHRLIANVCFGGFVVGAYAAVKFLNSKTKEERAHYDWMGYVGNFIGIGALIPLPF 328 Query: 237 LGDESGYEMGDVQKT 251 G G E+ Sbjct: 329 AGYWLGREVYSASPV 343 >UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive n=4 Tax=Burkholderia pseudomallei RepID=Q3JLJ0_BURP1 Length = 572 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Query: 410 SVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVAN-SSLTA 468 R+ ++ L P+ ++AV AGW E GRQPW + ++ TA + SLT Sbjct: 435 LWRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTT 494 Query: 469 GDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 D+ S+ Y A L+ + RLGP Sbjct: 495 TDVALSLAAYVLCYLAMFGAGFVLLLRLLRLGPP 528 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 4/96 (4%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++IV L+R QFA+T ++HF FVP ++G F++AIME++YV +GK YK MTKFWG +F + Sbjct: 8 MNIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLL 67 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLA 97 +FA+GV TG+ F F +S YS I PL Sbjct: 68 SFAVGVVTGI---FCFFIGYS-YSSGPRPISSLPLG 99 >UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=2 Tax=Archaea RepID=A1S0C2_THEPD Length = 396 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 87/234 (37%), Gaps = 5/234 (2%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL 71 AL H + V + + ++ ++ ++ G + + + + K++ + L G Sbjct: 8 MALVFGVHIVAVNIGIALSTIVPLLVKRSRALGDKGLEGVARSLFKVYAATYGLAGVMGT 67 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + + + G++ P I +++ L + F++GWDR H V W Sbjct: 68 AFTVFLASFYPEFVGVAGNLTMVPFGI-SIVSIMLHFFAIVAFWYGWDRFSPKVHEAVGW 126 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 L+A + L ++ P ++ + +LNP ++ +V Sbjct: 127 LLAATAYTIPLGFRAVFAFLNTPAG----LVLGEKPSLNVVQALLNPTFPPLYLKSVVGA 182 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 V G +F+ + A+ L+ + + + + + +++ LG + Sbjct: 183 LVAGFLFVAAVLAFKGLRTALTDAERGLYVFSLRYASMLLFAMMFLGAWYAVSL 236 >UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ62_DESAD Length = 821 Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 84/266 (31%), Gaps = 18/266 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATGL 71 A+ A H +G L + E + + D K K F + G TG+ Sbjct: 18 AVIATIHVFVAQFAVGGGLFLVVTEKLAYKTESGELLDYVKKHSKFFLLLTMVFGGGTGV 77 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F + + F A E + F E + ++++ WD++ + H+ + W Sbjct: 78 ALWFTMALLSPQGTLVLVREFLFAWATEWVW-FVGEIVALLIYYYYWDKMNRRDHLIIGW 136 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 + + LS I +M P + E SF + + NP A Sbjct: 137 FYFIFAFLSLFTINGVVSFMLTPGVWE--------ETRSFWDAIFNPTFWPALFFRTALC 188 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKT 251 + +F +A + +D + + ++ + G + Q Sbjct: 189 GMLAGLFGFVTAA----RIKDKDLRCMLVRFCGIWTLTGLVLTVFSGYWYMGSIPAEQIM 244 Query: 252 ----KLAAIEAEWETQPAPAAFTLFG 273 K + E A LFG Sbjct: 245 LVVHKSHRVAYFMEVFKYTAPVLLFG 270 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 39/71 (54%), Positives = 52/71 (73%) Query: 378 DSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAV 437 D++PRV PL++ RIM A G L+A A++ WS ++ EK+W LR AL+ +PLPWIA+ Sbjct: 2 DTVPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIAI 61 Query: 438 EAGWFVAEYGR 448 E GWFVAEYGR Sbjct: 62 ECGWFVAEYGR 72 >UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales RepID=C7LSV8_DESBD Length = 881 Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 10/197 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG-INFALGVA 68 L AL A++H +G L + E + D TK K F + LG Sbjct: 15 LLIALIAVFHVYIAHFAVGGGLFLVLTEHLGYRRQSPAILDYTKRHTKFFLLVTMVLGGI 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F AIE + F E + ++F+ + ++G+ H+ Sbjct: 75 TGVGIWFIISLVAPAATSQLIHTFVFAWAIEWVF-FLCEIVSLFIYFYTFGKMGRRNHLT 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 + WL +S I G+M P +E F + + NP Sbjct: 134 MGWLYFFFGWMSLFMINGIIGFMLTP--------GDWLETKDFWDGLFNPSFWPALAFRT 185 Query: 189 ASGYVTGAMFILGISAW 205 + ++ + W Sbjct: 186 FIALILAGLYGFVTATW 202 >UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like protein n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASZ4_RUBXD Length = 448 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 82/246 (33%), Gaps = 15/246 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 A+ H L L LG + + E + +++ + Y+ + +L I FA G A +T Sbjct: 18 AVLVQTHILIATLILGASLIAPTAEYLGMVTKQPRYERFARNLARLIVILFATGSALAIT 77 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL--GKVQHMCVT 130 T + + Y+ +IF +E + F + ++ WD+L K H+ Sbjct: 78 FVLALVTLFPIFFSYLQNIFFWVFLVEAFL-FLGVIIVLYAWYSVWDKLAYRKSLHVVFG 136 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 ++ + I V +M P + + LNP +H Sbjct: 137 FVAGGIGLIQMTMINVIASYMLTP---------SEAPVTDVASTYLNPTFVPLNMHRFVG 187 Query: 191 GYVTGAMFILGISAWYMLKG---RDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 I G +AW L+ D + +G +L V+G + + Sbjct: 188 NLSYVGFLIAGWAAWRYLRSTGEEDREYYDWMGHFGLLWGFGFLLLQPVVGYGYLKAIRE 247 Query: 248 VQKTKL 253 Sbjct: 248 SSPEAF 253 >UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB8_9DELT Length = 837 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 82/243 (33%), Gaps = 14/243 (5%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATGL 71 AL A H +G L + E SG + K K F + A G +G+ Sbjct: 18 ALIATVHVYVAHFAVGGGLFLILTERAAYRSGNPHLLEYAKKHTKFFLLLTMAFGAVSGV 77 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F + + F A E + F E + ++++ W+ + + H+ V Sbjct: 78 AIWFTIALLAPQATITLIHNFVFAWAAEWVC-FTGEIVALIIYYYTWETMNRRDHLMVGT 136 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 L + S I G+M P ++ F + + NP V Sbjct: 137 LYFIFGWFSLFLINGIVGFMLTP--------GEWLQTRDFWDGIFNPTFWSSLVFRSFFS 188 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKT 251 +F S + D A + +++ +A VL+V+ G ++ Q Sbjct: 189 AACAGLF----SFVTATRISDEATRTQVLRTCSAWTIAGVLAVVATGFWYMADLPPAQYE 244 Query: 252 KLA 254 +A Sbjct: 245 LVA 247 >UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD1_CALMQ Length = 417 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 119/364 (32%), Gaps = 5/364 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M+ V + A H V LG+ +LL +E + SG++ Y D+ Sbjct: 1 MVSPVVATVALIAWAFSVHLPLVYTVLGLGWLLPTLELLGYRSGRRTYIDIAHGLSSYLI 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +A+G G + +++ G + I + + +G ++ ++R Sbjct: 61 AVYAIGGVFGTIVTVFLAGLLPVFTNIAGALLWPVWGIAIVFGVAIALPLIGFYYRSFNR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNF----ETMRMEMVSFSELVL 176 L ++H+ V + +A+ + + + ++ P T V+ +E + Sbjct: 121 LSPMRHVAVGYGMAITLTVIPVMFRLVFAFINYPAGVAIAPSSTSNTGFTLSVNLTEALS 180 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 NP + T+ ++ + I W R + + I + G+ + + Sbjct: 181 NPTYPPLLLATLFGAIAMTSILVSSIHGWRYASSR-SEYHELGHRIGNTVGLIFGILYSI 239 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 Y + T +I + A + L+ I + + I+ Sbjct: 240 FAAWYLYTVYQYSPTVAWSIFGHPPSYLPSAFYGLYKPTFNLSWMLYMNIALGAVILILL 299 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 S+ ++ L + + + + + L + + L + L Sbjct: 300 VVSIKVTSKPIEVLKLILTPMLMDSAEVMNGLAHVPYAIVPPVAAAEALIKAYGLSFALN 359 Query: 357 LKRY 360 + ++ Sbjct: 360 VAKW 363 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 81.3 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 41/63 (65%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V L+R QFA +HF+F ++G+A L ++E +++ +G+ +Y ++ ++W K+F + Sbjct: 5 LDPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAV 64 Query: 62 NFA 64 F Sbjct: 65 VFG 67 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 37/79 (46%), Positives = 54/79 (68%) Query: 393 MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWA 452 M+A G L+ + +F +RN++ + LL+ L+G+PLPWIA+E GWF+AEYGRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IGEVLPTAVANSSLTAGDL 471 I E+LP V+ S+L + Sbjct: 61 IYEILPVGVSASNLNTNTI 79 >UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU5_HYPBU Length = 403 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 83/233 (35%), Gaps = 15/233 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 AL +H + V L + +A + ++ SG + + K + + + Sbjct: 9 ALVFAFHIVMVNLGIFLALYVPYLKRKADNSGDEDLDKVAHKLMKFYAATYGVAGVYATA 68 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMA---FFLESTFVGLFFFGWDRLGKVQHMCV 129 + + + G + P + LM FF + F ++GWDR + H Sbjct: 69 FTVFLLSFYPDFLGLAGHLTLIPFGLAILMIVVHFFSITGF----YYGWDRWSRRVHYFF 124 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVA 189 L+AL + L ++ P+ ++ + L NP ++ ++ Sbjct: 125 GALLALSALLIPFAFRAVFAFLNIPVG--LELSGGKLSLNVAKALTGNPTYWPLYLKSLI 182 Query: 190 SGYVTGAMFILGISAWYMLKGRDFAFAK------RSFAIAASFGMAAVLSVIV 236 + GA I+G A+ +K D + + + + G+ ++ + + Sbjct: 183 AAVTAGAFAIVGGLAYSYVKATDEGYKRAVSQVVKELTPIIAIGLVLMIVMGL 235 >UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XLC6_DESMR Length = 877 Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 30/234 (12%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQ----IYKDMTKFWGKLFGINFALGVAT 69 L A+ H +G L + E + +G + T+F+ + G + Sbjct: 19 LIAVLHVYVAHFAVGGGLFLVLTEAMARRTGSRPLLTYLHRHTRFF---LLLTMVFGGLS 75 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFL-ESTFVGLFFFGWDRLGKVQHMC 128 G+ + + + F A E AFF E + ++++G+DRL +HM Sbjct: 76 GVGIWLTISLLSPQATLILVRSFAWGWAAE--WAFFAGEIGALLIYYYGYDRLDPKRHML 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V WL + LS I G+M P F + NP V Sbjct: 134 VGWLYFAFAFLSLFTINGIIGFMLTP--------GDWPATRDFWDGFFNPTFWPSLVLRF 185 Query: 189 ASGYVTGAMF----ILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 A G + +F LGI D + ++ + +AA ++V G Sbjct: 186 ALGLMLAGLFGFATALGIG--------DEEARETMLRASSRWAVAAAPVLLVSG 231 >UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F9_9DELT Length = 880 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 77/230 (33%), Gaps = 20/230 (8%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQ----IYKDMTKFWGKLFGINFALGVA 68 AL A+ H +G L + E +G T+F+ + G Sbjct: 18 ALIAVLHVFVAHFAVGGGLFLVLTEAKARKAGSAPIMAYLHRHTRFF---LLLTMVFGAL 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 +G+ + F + + F A E F E + ++++G+DRL +H Sbjct: 75 SGVGIWFTISVLSPQATLVLIRTFVWGWATEWTF-FAGEIAALLVYYYGFDRLEPARHQL 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V + L + LS + G+M P F + + NP V Sbjct: 134 VGFFYFLFAWLSLFTVNGIIGFMLTPGQWPVTL--------DFWDGLFNPTFLPSLVLRT 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 A + +F G + L RD + A + + A +++ G Sbjct: 186 AMALLLAGLFGFGTA----LGIRDEEARETMLRAACRWVVYAAPVLLLSG 231 >UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like protein (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLC8_9BACT Length = 569 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 98/256 (38%), Gaps = 23/256 (8%) Query: 19 HFLFVPLTLGMAFLLAIMETVYVLSGKQ----IYKDMTKFWGKLFGINFALGVATGLTME 74 H + L + +E ++S + Y + + K+ ++L G + Sbjct: 30 HLYYGSFVLAVPIFCMCIEFAGLVSKDKAMAKKYDQLAYDFVKISLTAYSLTAILGGILI 89 Query: 75 FQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG----KVQHMCVT 130 F F T + + Y+ IF + I LM F ES + ++++GWD++ K H ++ Sbjct: 90 FTFLTLYPAFFGYLSSIFRPVMHIYALM-FVAESGTLYIYYYGWDKMKDGLLKWLHCSMS 148 Query: 131 WLVALGSNLSALWILVANGW---MQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 ++ + + + + +AN W M +P D E R + + ++ + VH Sbjct: 149 VVLNV---IGTVLMFLANSWIGFMMSPAGVD---EQGRF-LGNIWHVLHTALWNPLNVHR 201 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAF---AKRSFAIAASFGMAAVLSVIVLGDESGYE 244 + G + +A+ L ++ IA S G+A ++ + G E Sbjct: 202 ILGNMAFGGGVVAAYAAYRFLSAKNDEERAHFDWMGYIAMSLGVAFLIPLPFAGYWLMRE 261 Query: 245 MGDV-QKTKLAAIEAE 259 + Q+ + + Sbjct: 262 VYAYRQQMGITLMGGL 277 >UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C6_DESRD Length = 897 Score = 75.5 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 14/227 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATGL 71 AL A+ H +G L + E + + T+ K F + G TG+ Sbjct: 18 ALMAIVHVFVAHFAVGGGLFLVLTERKAYRENSKSILEYTRKHAKFFLLLTMVFGGLTGV 77 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F + + F A E + F +E + ++F+ + ++ + +H+ V W Sbjct: 78 GIWFTISVLSPGATSVLIHNFLYGWATEWVF-FVVEIVALFVYFYTFGKMDQQRHLTVGW 136 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 + + S I +M P +T +F NP V Sbjct: 137 IYFGAAWASLFLINGIIAFMLTP---GEWLQTG-----NFWHGFFNPTFWSSLVFRTFMA 188 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 V +F ++A +M +D + A + + ++ ++ G Sbjct: 189 IVLAGVF-GFVTATFM---KDQQARAQLIRYNARWLLVPMVFLVASG 231 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 55/62 (88%), Positives = 59/62 (95%) Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 +ANSSLT GDL+FSM LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS+ T+QP Sbjct: 1 MANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSTVTSQP 60 Query: 521 AR 522 AR Sbjct: 61 AR 62 >UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1E9_PELCD Length = 430 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 14/227 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFAL-GVATGL 71 A A+ H +G F L ++ET + Q T+ + +LF + + G TG+ Sbjct: 18 AAIAVSHVFISHFAVGGGFWLVLLETRALRHRDQPLYRFTQSFARLFVLTTLIFGALTGV 77 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F + + F A E ++ F +E + ++ + L +H+ V Sbjct: 78 GIWFAISLVQPAGTSALIHRFVFIWAAEWVL-FLVEVVAITVYLHSFGHLAPRRHLIVGR 136 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 + S LS I +M P + + R NP Sbjct: 137 VYCAASWLSLFAINGIITFMLTPGMASQHSGLPR--------AFFNPSFWPSLALRTCLA 188 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + +F+ +A+ D A R + A + + A+ + G Sbjct: 189 GLISGLFVAIFAAFLA----DRDLASRLIRMTAGWSLLALCGALPAG 231 >UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698A02 Length = 287 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 17/181 (9%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR + A H F L L + + ++E V V SG + Y M + K+ F++ Sbjct: 91 SRAVVWILAQMHLFFGALVLAVPLFVLVIELVGVTSGDERYDSMAHEFMKISLTGFSITA 150 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAP-LAIEGLMAFFLESTFVGLFFFGWDRLG---- 122 G ++ + + Y+ +FGA L GL FFLES F+ +++GW+ + Sbjct: 151 IFGGSLALALFLLYPDFMGYMMHVFGAQWLVYAGL--FFLESFFLYTYYYGWNAMRYGNA 208 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGW---MQNPIASDFNFETMRMEMVSFSELVLNPV 179 K H+ + L+ ++++N W M P + + + E++ P+ Sbjct: 209 KWVHLSLGLLLNGAGMT---IMVMSNSWATFMMAPSGVNEVG----AVIGNIWEVMKGPL 261 Query: 180 A 180 Sbjct: 262 W 262 >UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H2_DESAC Length = 655 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 78/230 (33%), Gaps = 14/230 (6%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF-GINFALGVA 68 L A+ A+ H +G L + E + K K F + G Sbjct: 15 LLIAIMAVTHVFVSHFAVGGGLYLVMTEHKARRENDDQLLEFVKKHAKFFMLLTMVFGGV 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F G + + F A E + F +E + ++++ +D + + H+ Sbjct: 75 TGVGIWFTIGLIQPDATSKLIHTFVFGWAAEWVW-FLVEIIALIIYYYKFDSMDERTHLK 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V W+ + LS I G+M P N F NP Sbjct: 134 VGWIYFAAAWLSLFLINGIIGFMLTP-GEWVN-------NHQFFSGFFNPTFWPSLWFRF 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 A + +F +A+ AF + ++ + + +++ VI G Sbjct: 186 AISTLLAGVFAFFTTAFI----DVEAFRLKMTRYSSLWCLLSLVVVIPTG 231 >UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3EB84_GEOLS Length = 585 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 14/230 (6%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF-GINFALGVA 68 L AL A+ H +G L + E + Q D K K F + G Sbjct: 15 LLIALVAIVHVFVSHFAVGGGLYLVLAERKAIKEKSQAIMDFVKKHTKFFMLLTMVFGGL 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F A E + F +E + ++F+ + ++ H Sbjct: 75 TGVAIWFVISLIHPAATSLLIHTFVFGWAAEWVF-FLVEIVALFVYFYAFGKMDDRTHQT 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 + W+ + +S I +M P + +F NP Sbjct: 134 IGWIYFGAAWMSLFLINGIIDFMLTP--------GSWISTSNFWSGFFNPTFWPSLFFRS 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 ++ + G LK + R + + + +++ + G Sbjct: 186 FMSFMLAGCY--GFLTATFLKDEEAR--HRMIRYSGVWALVSLILSVPAG 231 >UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like n=2 Tax=Desulfovibrio RepID=Q316Q4_DESDG Length = 841 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 86/265 (32%), Gaps = 18/265 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALGVATGL 71 A+ A+ H +G F L + E V D + + F + G TG+ Sbjct: 18 AIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGV 77 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFL-ESTFVGLFFFGWDRLGKVQHMCVT 130 + F + + F A E AFFL E + ++ + +D + + H+ V Sbjct: 78 GIWFTISVLSPTVTSTLTHSFAFGWAAE--WAFFLGEIAALLVYHYYFDSMPRKAHIKVG 135 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 W+ A + +S + I M P + F + N A Sbjct: 136 WVYAFFAFMSLVVINGIITVMLTP--------GKWAQTHLFWDGFFNVSFWPSLSLRFAL 187 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQK 250 + +F ++A ++ +R AA + + + G Y + Sbjct: 188 CLMFAGLF-AFVTA---IRIPHEETRERMVRRAAMWVGLPFAAAALSGIW--YLLILPDP 241 Query: 251 TKLAAIEAEWETQPAPAAFTLFGIP 275 + +E +T AF GI Sbjct: 242 QQSMVMERSTQTPHLVQAFIPLGIV 266 >UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3P6_DESDA Length = 459 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 14/227 (6%) Query: 13 ALTAMYHFLFV-PLTLGMAFLLAIMETVYVLSGKQIYKDMTK-FWGKLFGINFALGVATG 70 AL A+ H + L +G+ ++ + +T+ + + + +++ G + ++G TG Sbjct: 18 ALDAVLHVIISHGLAIGLMTMIILFQTLTWMGKGEHWAKISRSLLGPTVVVITSVGAVTG 77 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL---GKVQHM 127 + + F + +F P IE AF E + ++++ WDRL + Sbjct: 78 VGIWFITSILAPEGIGSLIHLFFWPWFIE-WGAFTSEVILLLIYYYLWDRLAEKQPGKLA 136 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHT 187 + W + + SA+ I G+M P F + NP + Sbjct: 137 ALGWGYVVMAVFSAILISGILGFMLTP--------DGWPWGQDFDQAYFNPTFAPQVFLR 188 Query: 188 VASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSV 234 +A+G G++ + AW + + AV V Sbjct: 189 LAAGLAIGSLLLTAWIAWRFKGTAQERGSALRLSGGVFLACVAVAGV 235 >UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B0F5_9RHOB Length = 152 Score = 64.7 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 213 FAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLF 272 +F KR + G+ + GD G + Q K+ IE WET P L Sbjct: 1 MSFHKRIY-----LGIKGFIPETGRGDMRGLNTLEYQPAKVTEIEGNWETDP-NIPLLLL 54 Query: 273 GIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKA 324 IP+Q +N F I IP +I + G + +++ + + A Sbjct: 55 AIPNQGTRSNNFEIAIPNGAPLILKHKANGLAPGHNDFVLEDSTIMHPRVSA 106 >UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V8T0_SULSY Length = 455 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 19/244 (7%) Query: 4 IVELSRLQFALTAMYHFLFV-PLTLGMAFLLAIMETVYVLSGKQIYKDMT-KFWGKLFGI 61 V RL FA+ A+ H L +G + +LA+ + + + Q D+T K LF Sbjct: 10 PVLGHRLIFAIDAILHVLISHGAAVGGSIVLALTQWYAIKTNDQKLYDLTYKILFVLFIA 69 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFF-----F 116 A+G TG+ + + +F E ++ F +E F+ +F + Sbjct: 70 ATAIGALTGIGIWIHANIIDPPAIGSLLRVFFWKWFTEWIV-FNVELIFLLAWFLTWKTY 128 Query: 117 GWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL 176 GW++ K + + VA S L+ + I G+M P ++ + + + Sbjct: 129 GWEKRTKNLKFGIVYAVA--SWLTMVIITAILGFMLTP--GNWLKSDFPAQP-DYIASLF 183 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLK--GRDFAFAKRSFAIAASFGMAAVLSV 234 NP + + IS ++ D A +++ +A + Sbjct: 184 NPSWIPSL---MFRTFFAIGFA-AAISMYWTWWFTRNDLALREKAERWFGRIVLATIPIT 239 Query: 235 IVLG 238 I+ G Sbjct: 240 IIFG 243 >UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWM7_HALO1 Length = 490 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 10/183 (5%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKD-MTKFWGKLFGINFALGVATGLTMEF 75 ++H +G LL E + M F+ L ++F LG TG+ M F Sbjct: 33 IFHVFLAQFAIGGGMLLCYFEHLRASGKVPAAAHFMDGFFKVLVLVSFVLGALTGVGMWF 92 Query: 76 QFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVAL 135 + + D F A+E F LE F+ DRL + ++ Sbjct: 93 TSIQTSARTIGLMVDAFHWLWAVEWTF-FLLEVVTGYTFYRYGDRLPDRLRQRLLIFYSI 151 Query: 136 GSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTG 195 + S WI W P +E + NP ++ Sbjct: 152 AAWGSLFWINGILSWQLTP--------GAWLENGNVWAGFFNPSFFPSLLYRTLVSMTIA 203 Query: 196 AMF 198 A+ Sbjct: 204 ALV 206 >UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibium RepID=B2V8T1_SULSY Length = 457 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 11/227 (4%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 ++ + H +F+ + LG + L I + L + Y + I+ +G G+ Sbjct: 39 VSFLVHIVFINVLLGSSVLSVINNWIGHLKNDKNYDKVAYLLTTPVTISENMGALWGVAP 98 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL--GKVQHMCVTW 131 ++ + Y + +P + + + L+ F W +L K H Sbjct: 99 LLIVSVMYTAF-FYSASVMNSPQWLHIIWGNVVAFLISYLYKFTWHKLEDHKALH----- 152 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 + +G+ + L++ + +M + T F ++V P + H Sbjct: 153 -ITIGAIAAILFLSLPPVFMST-VQLYITPSTWTP-NTHFWDVVSRPDVLFRLAHFYLGA 209 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + MF+L + KG+D A ++ + + + +G Sbjct: 210 FAVNGMFMLLYGVYKKSKGQDLEAANILIRQGKAWFLVPTVLNLFVG 256 >UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea RepID=A4WI49_PYRAR Length = 368 Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 8/217 (3%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 L H LF +TLG + A + + + K+ ++ G Sbjct: 13 GLAVTLHILFTAMTLGTGLIAAYYRWLAYRKNDAWSELFARKAFKVLIVSELFSGVWGTI 72 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWL 132 + ++ + + P+AI + + + + + ++ W ++ H + W+ Sbjct: 73 ITVFLAGFFTALTTLATNALFIPIAI-AIASIMVRIPTIAISWYTWGKIHPKTHSLIMWV 131 Query: 133 VALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGY 192 +AL + NP+A + +T E NP+ ++HTVA+ Sbjct: 132 MALSGFGIPFGFRAIFAEINNPVAVGYYLQTGNNPGFMPYE---NPLFWTLYLHTVAAVI 188 Query: 193 VTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMA 229 TG + + +D + I MA Sbjct: 189 STGGFVAASLMSL----EKDPKGISTALKIGFLVLMA 221 >UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHW0_THEYD Length = 883 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 22/240 (9%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGK---QIYKDMTKFWGKLFGINFALGVAT 69 A+ A++H +G L + + V G + Y ++ L + F G T Sbjct: 18 AIIAVFHVFISHFAVGGGIFLWLTDLKSVREGNISLRQYVRKHVWFFLLLTMVF--GGVT 75 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCV 129 G+ + F + + + + F AIE + F +E + ++ + ++ L + + Sbjct: 76 GVGIWFIIALSSPWATSLLIHTFVFAWAIEWVF-FIVEIVSLLIYHYKFETLSDKNRLRI 134 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVA 189 ++ A + LS I +M P + SF + NP V A Sbjct: 135 AFIYAASAWLSLFVINGIITFMLTP--------GQWLRTHSFWDGFFNPTNLPGLVFRTA 186 Query: 190 SGYVTGAM--FILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + + F+ + ++ + + + +I+ G Y + + Sbjct: 187 ICIMFAGLFGFVTAVF------EKEDKLRQEFLRYCVKWLYIPLPFLIISGLWYFYSIPE 240 >UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARV9_RUBXD Length = 450 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 89/265 (33%), Gaps = 14/265 (5%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 +R+ L + H F L +G A +++ +G + + + F+ G Sbjct: 27 ARVITGLVMLIHIFFAELFVGFALAAPVLQYWGARTGTPRMDRLAHSLVRFNVLTFSTGA 86 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR---LGKV 124 + + + + F L + +++ L + +++ WDR L K Sbjct: 87 TFAVLFLVLLVGLYPQVTASLFTHF-FYLVVIAMLSMLLALWGMYTYYYKWDRYSVLNKG 145 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSE---LVLNPVAQ 181 +H+ + + + + + + + +M + + SF + NP+ Sbjct: 146 RHIAFGFSMGVFIWIWMVIMTGIDTFMVTGGGAR-TPGISAENVASFGAALQAMFNPMFV 204 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR---DFAFAKRSFAIAASFGMAAVLSVIVLG 238 +H + A + +A+ + + D AF + ++ +G ++ G Sbjct: 205 EMSLHRTFANLSWPAFAMAAWAAFMYARSKTPEDRAFFDWTTSVGLIWGAGLLMLQPFSG 264 Query: 239 DESGYEM---GDVQKTKLAAIEAEW 260 Y M V AA + Sbjct: 265 FAIAYAMKLSAPVDPVSGAAEGGAY 289 >UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU9_CHIPD Length = 499 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 87/240 (36%), Gaps = 24/240 (10%) Query: 9 RLQFALTAMYHFLFV-PLTLGMAFLLAIMETVYVLSG------KQIYKDMTKFWGKL-FG 60 R A+ A+ H + L +G L+ +E V + + + K+ F Sbjct: 14 RFLIAMIAIIHVIINHGLAVGFIPLVTWLEQKGVKNSHAMEITDLSWDKLAWKMMKVGFI 73 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I LG TG+ + F + +F E ++ F E + ++F W+ Sbjct: 74 ITTTLGAMTGVGIWFSVALVSPASIGSLIRVFYWAWFTEWIV-FVTEVVLILIYFLSWEN 132 Query: 121 LGKVQ-----HMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV 175 K H+ W +++ S ++ + I+ G+M +P + + S Sbjct: 133 ANKSLTSKLRHIRFGWFLSIFSWITMVIIVSILGFMMDPGNWNTH--------HSLLNGF 184 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 NP+ + + + V G +F G+ + + KR+ A+++ + + Sbjct: 185 TNPIYIPQLLFRTPTAMVVGGVF--GLMLITLFTENGTSIRKRAIRSASAWILCWAPLSL 242 >UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK9_ARCB4 Length = 466 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 84/243 (34%), Gaps = 15/243 (6%) Query: 9 RLQFALTAMYHFLFVPLT--LGMAFLLAIMETVYVLSGK-QIYKDMTKFWGKLFGINFAL 65 R+ A+ A+ H +FV +G + +LA + Q Y + K F I+ ++ Sbjct: 17 RMLMAINAIIH-VFVSHGGAVGGSVVLAALAWWANKKNDMQAYNLIYKVVMVFFIISTSV 75 Query: 66 GVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR----- 120 G TG+ M + +F IE ++ F E + L F W + Sbjct: 76 GALTGVGMWIHANILSPNAIGGLIRVFFWKWFIEWIV-FNFEVVLLLLLFMTWKKNQQTP 134 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI--ASDFNFETMRMEMVSFSELVLNP 178 G+ + + A+ S L+ + I +M P + + V ++ + NP Sbjct: 135 EGRAKTVRFGVYYAISSWLTMVIITAILAFMLTPNFDGQPWVDPEVYPGNVDYNNALFNP 194 Query: 179 VAQVKFV-HTVASGYVTGAMFIL--GISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 T S A+ I+ I A + D R A+ + V Sbjct: 195 TWWPSLAFRTFTSIAFAAALAIMWTWIIATFSKNEEDKEAKARLIKFLAAIMLITVPISA 254 Query: 236 VLG 238 + G Sbjct: 255 IFG 257 >UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK8_ARCB4 Length = 441 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 80/227 (35%), Gaps = 20/227 (8%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQ 76 + H F+ + +G + I + V Y ++ +G G+ Sbjct: 32 VVHICFIYMLIGASTASVIYNIMGVFKKDSNYDKFAYRMTNYTTVSENMGALWGVAPLLV 91 Query: 77 FGTNWSYYSHYVGDIFGAPL---AIEGLMAFFLESTFVGLFFFGWDRLG--KVQHMCVTW 131 ++ + + + ++AF L + F W L K H+ + Sbjct: 92 ISVLFTGFFYTAILKISPHILHIIYGNIIAFLLS----YAYKFSWHALQNHKGFHIAIGL 147 Query: 132 -LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 V L +++ ++N +MQ P + + E++ PV + ++ + Sbjct: 148 SAVLAFFTLPFIFMSMSNLYMQ-PELF--------ASINNIWEIMFTPVTGFRLLNFFLT 198 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 ++ + ++ I A ++ +G D K S + + + A IV+ Sbjct: 199 AFMATGIVMIFIGARWVKRG-DTEIGKISISQGKKWFLLATPLNIVV 244 >UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales RepID=D1AZW3_SULD5 Length = 445 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 4/192 (2%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALG 66 S +T H LF ++G A L A + + Y K +G I + LG Sbjct: 17 SAWMMGITGTIHILFSHTSVGAAMLFAFLAHKAYKENRSDYYPYMKKYGMFLLIFSYVLG 76 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 TG + + + F A E + F E V + + +++ K H Sbjct: 77 SITGPGIWYTATAASPRGISALIHNFVWVWATEWVF-FIYEVIGVFVLVYFMNKIDKKTH 135 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + +T+ A+ S + I+ +M P + + T +F + P ++ Sbjct: 136 LQLTYTFAIASVGTLALIIGIISFMMWP-GTQAYYATGSAS-DAFFGINTFPHMFLRVGF 193 Query: 187 TVASGYVTGAMF 198 + V G + Sbjct: 194 MIMMSGVIGLLI 205 >UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibrio vulgaris RepID=A1VBG6_DESVV Length = 430 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 64/190 (33%), Gaps = 10/190 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVA 68 L A+ ++ H +G FLL T +G K + + F + + G Sbjct: 15 LLVAIISVLHVFVAQFAVGGGFLLVHAATRAERAGSAEATFWVKRFTRFFLLLSMVFGGV 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 +G+ + + + F A E + F E + ++++G+ ++ H Sbjct: 75 SGVGIWVIISLISPAATSLLVHRFVYAWATEWVF-FLGEIVALLVYYYGFGKMRFEDHRN 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V L L + LS I +M P M+ F + NP + Sbjct: 134 VGLLYGLFAYLSLFMINGIITFMLTP--------GAWMQTQGFWDGFFNPTFWPSLLFRS 185 Query: 189 ASGYVTGAMF 198 A + +F Sbjct: 186 ALCAMLSGLF 195 >UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME3_THISH Length = 473 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 12/225 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALGVA 68 L A H LF ++G A A + T+ + K +G + + G Sbjct: 19 WVVGLIATIHVLFSHTSVGAAIFFAFLATIAYRRNQPELLTFIKKYGLFLLVFAYVAGSI 78 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + + + F A E + F +E V + + ++ + H+ Sbjct: 79 TGVGIWYSTTVASPRGISALIHSFVWKWATEWVF-FVIEVVGVYMVVYLVGKVDQRTHLR 137 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 +TW+ AL S + L I+ +M P + E + + Sbjct: 138 ITWIFALASYATMLIIIGILSFMLWPGKEAWFAEGG------YLNGFYGSNTFAQLA-MR 190 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLS 233 ++ T + GI A + D + A G+ + ++ Sbjct: 191 SAFMFTMTAVVGGIVASRL---TDLDLRREIIRKLAWLGIVSTIT 232 >UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I0Y1_THIIN Length = 493 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 66/194 (34%), Gaps = 4/194 (2%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALGVA 68 + H L ++G A L A++E+ V K K +G + + G Sbjct: 20 WVMGIIGTIHVLASNTSVGAAVLFALLESRSVRENKPEIMQYIKKYGMFLLVFSYIWGSV 79 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG + + + F A E + F +E V + ++ H+ Sbjct: 80 TGPGIWYSTTVASPRGISALIHNFVWAWATEWVF-FTVEVIGVYALVYTIGKIDPKTHLK 138 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 +TW + S + + I+ +M P + + + +F L + + Sbjct: 139 ITWTFVVSSVATLVLIIGILSFMMWPGSDRWYLTGSVFD--AFYNLNFAAQLADRGFLML 196 Query: 189 ASGYVTGAMFILGI 202 S V G++ + I Sbjct: 197 TSAAVVGSIIVAAI 210 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/34 (67%), Positives = 28/34 (82%) Query: 111 VGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWI 144 +GLFFFGWDRL K +H+ T+ VA GSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWI 34 >UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B63 Length = 474 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 15/201 (7%) Query: 2 LDIVELSRLQFALTAMYHFLFV-PLTLGMAFLLAIMETVYVLSGKQIYKDMTKFW-GKLF 59 LD V RL L A H L PL +G +L ME + + +F Sbjct: 8 LDHVAGGRLIIGLIASLHVLINHPLAVGAYPILTWMEWWAHKHQRPDIDRLAYRVTSVVF 67 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 + +G TG+ + + + +F E L+ F E + +F W Sbjct: 68 IVTTTVGALTGVGIWVSTSLFAPFAIGSLLRVFFWGWFAEWLV-FISEVGLIMWWFLSWK 126 Query: 120 RLG----KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV 175 + K +H+ + +++ S + I+ G+M P + +F + + Sbjct: 127 QANTPEKKRRHIKIGVALSVMSWFTMALIVAVLGFMMKPGEWS--------QTRAFLDAM 178 Query: 176 LNPVAQVKFVHTVASGYVTGA 196 +NP+ + +TGA Sbjct: 179 VNPLYLPQLGFRTFFALMTGA 199 >UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chloroflexaceae RepID=B8G4R1_CHLAD Length = 470 Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 12/193 (6%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI-YKDMTKFWGKLFGINFALGVATGL 71 A+ + +H L LT+ A+ +E V + Y + + L + G G+ Sbjct: 17 AIVSAFHVLASHLTVAAAWFNLYLERRAVYEQRPELYVYLKRSALGLLVFAYVFGAMAGV 76 Query: 72 -TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + N S + + F E M F ++ + +++ +DR+ H+ + Sbjct: 77 GIWQTTTAANPRGISTLIHN-FVFYWGAEWYM-FLIDVVGIIAYYYSFDRVSPRIHLRLA 134 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 W++ALG + I+ + P ET NP + + + Sbjct: 135 WILALGGTGTLTIIVGILSFKLTP---GLWLETGNS-----LNGFFNPTFWPQILLRFSL 186 Query: 191 GYVTGAMFILGIS 203 + A + L IS Sbjct: 187 MFTITAAWALLIS 199 >UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU8_CHIPD Length = 446 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 31/197 (15%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 ++ + H +FV L +G + L E + + Y K +N +L V G+ Sbjct: 32 ISFLAHIVFVNLMVGGSLLTLWAEIKGLK--DKDYDKFAYEMAKTITVNKSLAVVLGVAP 89 Query: 74 EFQFGTNWSYYSHYVGDIFGA------PLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHM 127 T +S Y + + G PL +AF L L + W +L + + Sbjct: 90 LLSINTLYSVYFYSANALTGLMWISVIPL---VTIAFLL----TYLHKYSWYKLSDNKAL 142 Query: 128 CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRM-----EMVSFSELVLNPVAQV 182 + + A A+ I ++ P+ N M + F ++ P Sbjct: 143 HIAIVGA------AVLI-----FLFIPLIFLVNINLMLFPEKWGTVGGFLSALVLPNVFP 191 Query: 183 KFVHTVASGYVTGAMFI 199 +++H + + +F+ Sbjct: 192 RYLHFIFASLGVTGLFV 208 >UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n=2 Tax=Geobacillus RepID=C9RX36_GEOSY Length = 65 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG 44 D V LSR+ LT +H ++ + +G+ ++AI + V + S Sbjct: 5 DPVWLSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRSK 46 >UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcus capsulatus RepID=Q609P5_METCA Length = 455 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 2/146 (1%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALGVA 68 + A+ H L ++G A + + TV V + + + +G + + LG Sbjct: 23 WVLGIIAVVHVLASHTSVGAALVSTWLATVAVRRNRPELLEYVRRYGVFLLVFSYVLGSI 82 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG + F + + A E + FF+E + L + ++ ++ Sbjct: 83 TGPGIWFSATVASPRGLSALIHSYVWWWATEWVF-FFIEVIGIYLLVYLAGKVDGRSYLK 141 Query: 129 VTWLVALGSNLSALWILVANGWMQNP 154 + W+ L S + L I+ +M P Sbjct: 142 IAWIFGLASWATMLIIVGILSFMMWP 167 >UniRef50_D1XIB5 General substrate transporter n=1 Tax=Streptomyces sp. ACTE RepID=D1XIB5_9ACTO Length = 447 Score = 41.2 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 171 FSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLK---GRDFAFAKRSFAIAASFG 227 V + + T + G ++ G+ A L+ GR FA S IA Sbjct: 247 PIADVFTHAWRQIVLVTFLGALIVGGYYVAGVYAASYLQTEGGRSADFAFTSTCIAMVAA 306 Query: 228 MAAVLSVIVLGDESGY 243 + ++ +GD G Sbjct: 307 VISLPIAGYVGDRIGR 322 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 T... 512 e-143 UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 T... 502 e-140 UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192... 459 e-127 UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 T... 447 e-124 UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 445 e-123 UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 443 e-123 UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 443 e-122 UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subun... 428 e-118 UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Ta... 418 e-115 UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax... 413 e-114 UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Ta... 412 e-113 UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Ta... 408 e-112 UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax... 407 e-112 UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 ... 402 e-110 UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 400 e-110 UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Ta... 400 e-110 UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex a... 399 e-109 UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 394 e-108 UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 387 e-106 UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 386 e-105 UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 384 e-105 UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA... 382 e-104 UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=9... 382 e-104 UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I ... 381 e-104 UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 377 e-103 UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 374 e-102 UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 372 e-101 UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 371 e-101 UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacte... 371 e-101 UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 369 e-100 UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment... 368 e-100 UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Ta... 366 e-99 UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax... 364 4e-99 UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 362 2e-98 UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria... 362 2e-98 UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Ta... 361 4e-98 UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 360 9e-98 UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 T... 359 2e-97 UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 358 3e-97 UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Ta... 358 4e-97 UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 356 1e-96 UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 ... 355 3e-96 UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 T... 354 3e-96 UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit ... 354 4e-96 UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bac... 354 5e-96 UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 353 8e-96 UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111... 352 1e-95 UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 352 2e-95 UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 350 1e-94 UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Ta... 349 2e-94 UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 T... 349 2e-94 UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosyn... 348 3e-94 UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 ... 346 1e-93 UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 345 2e-93 UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 342 2e-92 UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 T... 342 3e-92 UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 339 1e-91 UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 338 2e-91 UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 ... 337 5e-91 UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 333 7e-90 UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 333 8e-90 UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 ... 333 1e-89 UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 332 1e-89 UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 327 5e-88 UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I... 327 5e-88 UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 T... 326 1e-87 UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 324 6e-87 UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n... 323 8e-87 UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 323 1e-86 UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 322 2e-86 UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 T... 320 1e-85 UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii o... 318 2e-85 UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 317 7e-85 UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Ta... 317 9e-85 UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronoba... 316 1e-84 UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14... 313 8e-84 UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 312 3e-83 UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 304 4e-81 UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 303 8e-81 UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Ta... 303 1e-80 UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Ta... 302 3e-80 UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Ta... 298 4e-79 UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit ... 296 1e-78 UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Ta... 295 4e-78 UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 293 8e-78 UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of sub... 293 1e-77 UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit ... 285 2e-75 UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Ta... 285 2e-75 UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Ta... 283 2e-74 UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Strept... 281 6e-74 UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax... 278 3e-73 UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Ta... 278 3e-73 UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Ta... 275 3e-72 UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I... 275 3e-72 UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Ta... 272 2e-71 UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase ... 267 7e-70 UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax... 266 1e-69 UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 263 1e-68 UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax... 262 3e-68 UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 253 9e-66 UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Ta... 248 4e-64 UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 244 7e-63 UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 T... 237 6e-61 UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Ta... 230 1e-58 UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax... 229 2e-58 UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 225 3e-57 UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I ... 216 2e-54 UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella... 212 3e-53 UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 T... 209 2e-52 UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax... 209 3e-52 UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 T... 205 3e-51 UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like... 203 2e-50 UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 202 2e-50 UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 200 8e-50 UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase... 195 3e-48 UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Ta... 193 2e-47 UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales ... 190 1e-46 UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalob... 190 1e-46 UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like... 181 4e-44 UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulf... 179 2e-43 UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like... 179 3e-43 UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like... 178 4e-43 UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like... 177 6e-43 UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like... 177 1e-42 UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibri... 172 3e-41 UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cyto... 168 4e-40 UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like... 157 6e-37 UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms Rep... 157 6e-37 UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter c... 149 4e-34 UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like... 144 6e-33 UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax... 143 2e-32 UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome b... 143 2e-32 UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichop... 141 9e-32 UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibri... 140 1e-31 UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensi... 137 7e-31 UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobac... 137 1e-30 UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp... 135 5e-30 UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfuri... 133 2e-29 UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfo... 132 4e-29 UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like... 129 3e-28 UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales R... 128 5e-28 UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1... 127 1e-27 UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like... 126 2e-27 UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax... 125 3e-27 UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibiu... 125 6e-27 UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like... 125 6e-27 UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidas... 123 2e-26 UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas in... 123 2e-26 UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 ... 122 3e-26 UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like... 122 5e-26 UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=... 120 2e-25 UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chlorof... 116 2e-24 UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 115 5e-24 UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Ta... 114 6e-24 UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 T... 114 7e-24 UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubroba... 112 2e-23 UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I ... 108 5e-22 UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=... 107 1e-21 UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobac... 105 4e-21 UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive... 100 2e-19 UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1... 98 9e-19 UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea Rep... 97 1e-18 UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinens... 92 5e-17 UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactoba... 83 3e-14 UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Ga... 83 3e-14 UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 T... 72 4e-11 UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like... 72 6e-11 UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax... 70 2e-10 UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax... 69 3e-10 UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I... 59 4e-07 Sequences not found previously or not previously below threshold: UniRef50_D0L1U5 Cytochrome c class I n=2 Tax=Proteobacteria RepI... 117 7e-25 UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcu... 113 2e-23 UniRef50_UPI0001744B64 putative Cytochrome-c oxidase n=1 Tax=Ver... 73 2e-11 UniRef50_C7LSV7 Putative uncharacterized protein n=1 Tax=Desulfo... 52 4e-05 UniRef50_C8X0C5 Putative uncharacterized protein n=1 Tax=Desulfo... 52 5e-05 UniRef50_Q1K0H3 Putative uncharacterized protein n=1 Tax=Desulfu... 50 2e-04 UniRef50_C0GRA3 Putative uncharacterized protein n=1 Tax=Desulfo... 50 2e-04 UniRef50_B8DQZ1 Putative uncharacterized protein n=1 Tax=Desulfo... 48 0.001 UniRef50_B8J3P7 Putative uncharacterized protein n=1 Tax=Desulfo... 47 0.002 UniRef50_D1UBB9 Putative uncharacterized protein n=1 Tax=Desulfo... 47 0.002 UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Ha... 45 0.009 UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n... 44 0.019 UniRef50_A8X399 C. briggsae CBR-UNC-32 protein n=4 Tax=Caenorhab... 42 0.067 UniRef50_C6BZ61 Putative uncharacterized protein n=1 Tax=Desulfo... 42 0.078 >UniRef50_P0ABK0 Cytochrome d ubiquinol oxidase subunit 1 n=263 Tax=Bacteria RepID=CYDA_ECOL6 Length = 522 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG Sbjct: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR Sbjct: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 >UniRef50_Q09049 Cytochrome d ubiquinol oxidase subunit 1 n=172 Tax=Bacteria RepID=CYDA_AZOVI Length = 537 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 358/511 (70%), Positives = 430/511 (84%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +V+LSRLQFA+TA+YHFLFVPLTLGM FLLAIME+VYV++GKQ+YKDM KFWGKLFGIN Sbjct: 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV TG+TMEFQFGTNW+YYSHYVGDIFGAPLAIEGL AFFLESTF+G+FFFGWDRL Sbjct: 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K+QH+ VTWLVALGSNLSALWILVANGWMQ+P+ ++FNFETMRME+V F L+LNPVAQV Sbjct: 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHTVASGYVTGA+F+L IS++Y+LK RD FA+RSFAIA++FGMA++LSVIVLGDESG Sbjct: 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 YE+G+VQK KLAAIEAEWET PAPA+FTL G P++EE+ FA++IP+ LGIIATRS+D Sbjct: 245 YEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLDE 304 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 VIG+K+L+ HE RIRNGM Y LLE+LR+G+ FN +K DLGYGLLLK+YTP Sbjct: 305 QVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLKKYTP 364 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 NV DA+E QI+QA KD+IP VA ++++FR MV GF +L + +FW+ R K WL Sbjct: 365 NVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWL 424 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 L+ ALY +PLPWIA + GWFVAE+GRQPW IG VLPT ++ SSL+ GDL S++ + Y Sbjct: 425 LKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFY 484 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 TL LV E++LM +FARLGPSSL TGRYHFEQ Sbjct: 485 TLLLVVEMYLMIRFARLGPSSLHTGRYHFEQ 515 >UniRef50_Q3BSJ7 Cytochrome D ubiquinol oxidase, subunit II n=192 Tax=cellular organisms RepID=Q3BSJ7_XANC5 Length = 555 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 299/513 (58%), Positives = 382/513 (74%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 +VELSRLQFA+TAMYHF+F PLT+G++FLL IME+VYV++GKQI++ MT FWG LFGINF Sbjct: 21 VVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVLFGINF 80 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ MEF+FG NWSYYSHYVGDIFGAPLAIEGLMAFFLE+TF+GLFF GW+RL K Sbjct: 81 AMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGWNRLSK 140 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 VQH+ TWLVALGSN SALWIL+ANGWMQNP + FN +TMRME+V F ++ NPVAQ K Sbjct: 141 VQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNPVAQAK 200 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 FVHTV++GYV GA+F++ ISA+Y+L+G+ A+RSFA+AA+FG+ + LSV+VLGDESGY Sbjct: 201 FVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLGDESGY 260 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 + QK KLAAIEA WET+ APA FT FGIP+Q N +AI+IPY +G+IATRS+D P Sbjct: 261 AASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATRSLDEP 320 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 + G+ EL+ + E RIR G AY L+++R+ D R F++ +DLG+GLLLKRY + Sbjct: 321 IPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLKRYRDD 380 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423 + +AT QI QA D++PRV PL++ FRIM A G L+A A++FW ++ EK+W L Sbjct: 381 IGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQEKRWFL 440 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483 AL+ +PLPWIA+E GWFVAEYGRQPWA+ VLPT A S L +++ ++V LYT Sbjct: 441 SLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGFTALYT 500 Query: 484 LFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 LV + L K GP L + Sbjct: 501 TLLVIAIKLSLKTINKGPEVLFPPMPPNALPAA 533 >UniRef50_C7JB74 Cytochrome bd ubiquinol oxidase subunit I n=10 Tax=Proteobacteria RepID=C7JB74_ACEP3 Length = 537 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 256/524 (48%), Positives = 345/524 (65%), Gaps = 8/524 (1%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V+LSR QFALTA+YHF+FVPLTLG+ F+LA METVYV++G+QIYKDM +FWGKLFGIN Sbjct: 7 NVVDLSRFQFALTALYHFMFVPLTLGLTFMLAAMETVYVVTGRQIYKDMAQFWGKLFGIN 66 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATG+TMEF+FGTNWS YSH+ GD+FG PLAIEGLMAFF+ESTFVGL FFGWDRL Sbjct: 67 FAIGVATGITMEFEFGTNWSMYSHFFGDMFGTPLAIEGLMAFFMESTFVGLMFFGWDRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+LVALGSNLSALWIL+AN M P + F+ ETMRM+ SF LV NP AQ Sbjct: 127 KQAHLAITYLVALGSNLSALWILIANAGMNMPEGAHFDPETMRMQFESFVNLVFNPDAQA 186 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KFVHT +GYV+ AMF++GISA+Y+L+G+ FA RSF +AA FG+ + ++VI LGD G Sbjct: 187 KFVHTSVAGYVSAAMFVMGISAFYLLRGQHRQFAARSFRMAALFGIISTVAVITLGDVLG 246 Query: 243 YEMGDVQKTKLAAIEAEWETQPAP-AAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q TK+AAIE W T P + L +PD ++ N F + +P L + T + D Sbjct: 247 RLDYEKQPTKIAAIEGLWHTSKPPFEPWILAALPDDAKQENHFEVGVPLVLTPLITHTFD 306 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 P+ G+ EL RIR+G++A S L + +D A F ++D+GYGLL R+ Sbjct: 307 QPITGMHELEDAAGPRIRSGIEAVSALRRYGVTHSD-ADLTLFTQHEQDMGYGLLAARHA 365 Query: 362 PNVADATEAQ------IQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 PN + ++ D +P V +++FR MV A+ A+S + ++ R Sbjct: 366 PNQDVTNIPENQIDTVVKATQPDILPNVFVTFWSFRFMVFLSLWFFALFAISAYVSLKRR 425 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 + K LL+ ++ IPLP +A E GW AE GRQPW + LPT ++ SS ++FS+ Sbjct: 426 LEHNKLLLKLCMWSIPLPILATEFGWITAEAGRQPWTVFGWLPTFLSASSHGVSYMVFSL 485 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 + LY++F+ AEL+LMFKFARLGP + + + Sbjct: 486 IGFVLLYSVFIAAELYLMFKFARLGPEHDSMEPHAQHDAPKPSA 529 >UniRef50_C1DWD9 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Sulfurihydrogenibium RepID=C1DWD9_SULAA Length = 516 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 198/510 (38%), Positives = 295/510 (57%), Gaps = 16/510 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR QF +TA YHFLFVPLTLG+A ++AI++T+Y+ + + Y ++ F KLF I Sbjct: 1 MDLLTLSRFQFGMTAFYHFLFVPLTLGLALIIAILKTIYLKTKDKRYDNLAMFLMKLFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATGLTMEF+FGTNW YS VGDIFGAPLAIEGLMAFFLESTF+GLF FG DR+ Sbjct: 61 NFAVGVATGLTMEFEFGTNWFKYSILVGDIFGAPLAIEGLMAFFLESTFIGLFLFGRDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN--FETMRMEMVSFSELVLNPV 179 V H W+VALGS LSALWIL+AN WMQ P ++ + +F E LN Sbjct: 121 SDVVHTFSAWMVALGSTLSALWILIANSWMQTPAGYKIVESPHGVKAVLTAFFEAALNHS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++F+H V +GY+ G F++G+ A+Y+LKG+ AK A F + I+ GD Sbjct: 181 SIIRFLHCVDAGYIVGGFFVMGVMAYYLLKGKHVEIAKVGLKFALIFTAVVSIFQIIFGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 GY++ + Q K+A +E +WET+ A+ L G+ DQE++ + ++IPY L I++ Sbjct: 241 IHGYQVSNTQPLKMAMMEGKWETEKG-ASLDLLGVVDQEKQETRVILKIPYLLSILSYHD 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQ-LRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 + G+K+L+ +++++ + +LEQ L+ A +++ +K DL Sbjct: 300 PNAEFKGIKDLVKEYQQKAQEASARIPVLEQKLKELEATNASQEEIQKVKDDLAMA---- 355 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 ++A+ T + +P VA ++ F +MV GF ++ + + + Sbjct: 356 --------KSQAKAYNITFNDLPSVATVFTTFHLMVYLGFFFAFVVIWGLILLKKGTLYT 407 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 K L L IPLP+IA GW AE GRQPW + VL T S +++FS++ Sbjct: 408 NKAFLWTVLLSIPLPFIASNLGWISAEIGRQPWLVQGVLLTKDGVSFHPTVNVLFSVIFF 467 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 +YTL + + M K + GP + K+ Sbjct: 468 MVIYTLIYIVFFYAMVKAIKKGPDTSKSEP 497 >UniRef50_A9KD51 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Coxiella burnetii RepID=A9KD51_COXBN Length = 516 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 244/511 (47%), Positives = 354/511 (69%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++V LSR QFALTA++HFLFVPLTLG+ ++L IM +VYV +G IYKDMT+FW KL IN Sbjct: 6 ELVNLSRFQFALTALFHFLFVPLTLGLTWILVIMVSVYVKTGNVIYKDMTQFWSKLLAIN 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG+T+EF+FG NW+Y+S +G F LA+EG+ AF LE+T GLFFF W+++G Sbjct: 66 FAMGVLTGITLEFEFGQNWAYFSRMIGGSFAPVLAVEGITAFMLEATMFGLFFFSWNKVG 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+L+ALG++LS + IL AN WMQ P A+ FN++ M +E+ S L LN +AQ+ Sbjct: 126 KKAHLGITFLMALGASLSIVNILAANSWMQKPTATTFNYQNMSLELHSIIALYLNSLAQI 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H G++TG++F++G+SA+Y+L GRD FAKRSFA+ FG+ L+V GD++G Sbjct: 186 RISHVAFGGFLTGSIFVMGVSAFYILVGRDIEFAKRSFAVGVGFGLICALAVAFYGDQNG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ + K+AAIEA+W+TQ PA+++L P Q+E+ N F I IPYAL +IAT S+ Sbjct: 246 LQVAKYEPEKMAAIEAQWQTQKPPASWSLIAFPSQKEQKNYFVISIPYALSLIATHSLKG 305 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 V G ELM +++RI NGM AY + ++ R +N K DLG+G LL RY P Sbjct: 306 VVPGALELMKGYKQRIENGMLAYGAMRKMLEAKATPQDRSLYNRYKNDLGFGFLLDRYNP 365 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 V ++T A+I+ AT+D+IP +A +++FR M L+L ++ F+ RN + + + Sbjct: 366 RVVNSTPAEIEAATRDTIPNMAIAFWSFRFMFGLWGLMLLLLIFGFFYCYRNTLTQHRLF 425 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 LR ALY IPLP++A E GW +AE GRQPW++ E+LPT ++ S+++ ++ S++ Y Sbjct: 426 LRCALYAIPLPFLAAEFGWILAESGRQPWSVHEILPTFMSVSTISVSTVMTSLLGYIAFY 485 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 + V ELFLMFK+AR GPSSL+TGRY+FE+ Sbjct: 486 SSLFVIELFLMFKYARRGPSSLETGRYYFER 516 >UniRef50_B4U7P6 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7P6_HYDS0 Length = 514 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 193/522 (36%), Positives = 292/522 (55%), Gaps = 32/522 (6%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++LSR QFA TA+ HF+FVPLTLG++ +AI++T+ + Y + F KLF + Sbjct: 1 MDLLDLSRFQFAFTAIVHFIFVPLTLGLSVFIAIVKTIAYKTKDPKYDKLAMFLMKLFAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA GVATGLTMEF+FGTNW YS +VGDIFGAPLAIEGLMAFFLESTF+G+F FG DR+ Sbjct: 61 NFAAGVATGLTMEFEFGTNWFTYSKFVGDIFGAPLAIEGLMAFFLESTFIGVFLFGKDRI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF--NFETMRMEMVSFSELVLNPV 179 H W+VALGSNLSALWIL+AN WMQ P + +R E+ +F E V+N Sbjct: 121 SDGMHTFSAWMVALGSNLSALWILIANSWMQTPAGYKIVQTPQGIRAELTNFWEAVINHT 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 ++ +HTV +G +T F++G+ A+++L+ ++ AK +A F + +S I++GD Sbjct: 181 TVIRLLHTVTAGQITAGFFVMGVMAYFLLRNKNIDMAKAGLKVALIFTVIVSVSEIIIGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 +G+ + + Q KLA +E +W T+ PA+ +FG DQ + IQIP L ++ + Sbjct: 241 TAGHLVAEYQPLKLAMMEGKWNTE-QPASLDVFGYVDQSAQKTYPFIQIPGLLSFLSYHN 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 D V G+ +L+ ++++ +N LE + + + A++D+ Sbjct: 300 FDAKVYGINDLITMYDQKAQNYANEEKTLEAQYASNPNPALKDKI--------------- 344 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 VAD A+ + +P + ++ F IMV GF + + + + Sbjct: 345 ----VADKAYAKAYNISLKDLPPINLVFMPFHIMVGLGFFFAFVTLWGLYLYKKGTLYTN 400 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 K L+ LY IPLP+IA E GW AE GRQPW + VL TA A S + +++FS++ Sbjct: 401 KAFLKTVLYSIPLPFIASELGWMTAEIGRQPWIVTGVLKTADAVSFNSTSNVMFSVLTFV 460 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPA 521 +Y L + M K + + + + +T PA Sbjct: 461 TIYILLFYVYVTTMIKKVKE----------YEDTEAPSTAPA 492 >UniRef50_Q14JG5 Cytochrome d terminal oxidase, polypeptide subunit I n=43 Tax=cellular organisms RepID=Q14JG5_FRAT1 Length = 592 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 257/576 (44%), Positives = 351/576 (60%), Gaps = 63/576 (10%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V+L+RLQF LTA +HFLFVPLTLG+ ++L ME +Y+ +GK++YKDM KFWGKL GINFA Sbjct: 16 VDLARLQFGLTASFHFLFVPLTLGLTWILFTMELMYIRTGKEVYKDMVKFWGKLLGINFA 75 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 LG+ TGLTMEF+FGTNWSYYS VGDIFG PLAIEGL AF LESTF GLFFFGWD+L K Sbjct: 76 LGIITGLTMEFEFGTNWSYYSQSVGDIFGTPLAIEGLAAFMLESTFAGLFFFGWDKLTKK 135 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 QH+ T+ +A+GS+ SAL ILVANG+MQ+P+ S+F TMRME VS +L LN AQ F Sbjct: 136 QHLLSTFCLAIGSSFSALLILVANGYMQHPVGSEFVASTMRMETVSLLDLFLNHTAQTNF 195 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H + +GY T A+F++GISA+Y+++GRD AFAKRS AI FG+ + I+ GD +G + Sbjct: 196 GHVMTAGYTTAAIFVIGISAFYLIRGRDIAFAKRSIAIGLGFGLITCIVAIIFGDANGVD 255 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 VQ K+AAIEAEW+T APAAF +P Q+E+ N F + IP LG+IAT S DT + Sbjct: 256 AFRVQPLKMAAIEAEWDTSKAPAAFNAVALPSQKEQKNNFDVPIPAVLGLIATHSTDTEI 315 Query: 305 IGLKEL------------------------------MVQHEERIRNGMKAYSLLEQLRSG 334 G+K + K S L ++ G Sbjct: 316 PGIKAILYGKKTADGTRDPNLAYYRDIKTGQTADVSPEDAAADPSKYEKVPSALVMIKEG 375 Query: 335 STDQAVRDQF-------------------NSMKKDLGYG-LLLKRYTPNVADATEAQIQQ 374 A ++ + +K +G+G +L++ A A I + Sbjct: 376 GLAYADLLKWRETGHSGDTPDSSYTNYNNPTYQKYMGFGKMLVQAAQEKYGVADSATIAK 435 Query: 375 ATKD----------SIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE---KKW 421 A D +P VA ++++FRIMV GF + +I + + RN + ++ Sbjct: 436 AANDPELVRAVATNMVPDVASVFWSFRIMVFIGFFMFTLIVVGLILLARNALTSNAFSRF 495 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 +LR ++ IPLP+IA AGW+V E+GRQPW + + LPT++++S+LTA D+ SM + + Sbjct: 496 ILRVMIWSIPLPYIACIAGWYVTEHGRQPWTVYDQLPTSISSSALTAADVGTSMAIFFLI 555 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 T +FLMFK+ARLGPSSL TG+Y+FEQ+ + Sbjct: 556 DTALFAVMVFLMFKYARLGPSSLGTGKYYFEQNKKS 591 >UniRef50_B2RJL5 Cytochrome d ubiquinol oxidase subunit I n=45 Tax=Bacteria RepID=B2RJL5_PORG3 Length = 529 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 201/522 (38%), Positives = 299/522 (57%), Gaps = 23/522 (4%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 V SR QFALTAMYH+LFVPLTLG+ ++AI+ET+Y +GK +K +FW KLFGINFA Sbjct: 9 VSWSRAQFALTAMYHWLFVPLTLGLGVIMAIVETIYYRNGKPEWKRYAQFWQKLFGINFA 68 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ K Sbjct: 69 IGVATGIILEFEFGTNWSNYSLFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVSKG 128 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H+ TWL +G++LSA+WIL+AN WMQ P+ FN +TMR EM F LV + A KF Sbjct: 129 FHLSATWLTIIGASLSAVWILIANAWMQEPVGMTFNPDTMRNEMTDFWALVFSSTAINKF 188 Query: 185 VHTVASGYVTGAMFILGISAWYMLKG--RDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 HT++S + G++F LG+ Y+L+ + FA ++ I A FG+AA L GD S Sbjct: 189 WHTISSCWTLGSVFALGVCGIYLLRKDDKHKDFALKNIKIIAPFGLAASLITAFTGDTSA 248 Query: 243 YEMGDVQKTKLAAIEAEWETQ----------PAPAAFTLFGI-------PDQEEETNKFA 285 Y + Q KLAA+E +++ +LFGI P ++E F Sbjct: 249 YNVAQKQPMKLAAMEGLYDSGQTDKDGLTADGKGLPLSLFGILNPAKETPQDDKEAFLFN 308 Query: 286 IQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFN 345 + +P L ++ TR+ V G+ + ++ +G A + ++ G + ++ Sbjct: 309 VSVPRVLSVLGTRNPSGYVPGINNI-LEGGYVKADGTTAIPVDSMMQRGRRAIMALNDYS 367 Query: 346 SMKK--DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAI 403 K+ D+ L K Q D +P + Y++FRIMV G L + + Sbjct: 368 KAKQAGDMEAALQHKSVIDENFPYFGYSYIQHKNDIVPPIGLTYYSFRIMVGLGMLFILL 427 Query: 404 IALSFWSVIRN-RIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA 462 +++ + + + +W A+ +PL W+A ++GW VAE GRQPW I ++LP A Sbjct: 428 FLMAWLLSFKPEKFSKMRWFHMIAIVCMPLAWVASQSGWIVAEVGRQPWTIQDLLPVQAA 487 Query: 463 NSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSL 504 S L AG +I + + L++ LVAEL +M K + GP + Sbjct: 488 VSKLEAGSVIITFFVFLVLFSALLVAELNIMRKAIKKGPETE 529 >UniRef50_D1QN73 Cytochrome D ubiquinol oxidase subunit 1 n=4 Tax=Prevotella RepID=D1QN73_9BACT Length = 539 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 208/510 (40%), Positives = 306/510 (60%), Gaps = 14/510 (2%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 ++ SR QFALTA+YH+LFVPLTLG+A ++ I+ET Y + KQ +K+ + FW KLFGINF Sbjct: 35 TIDWSRAQFALTAIYHWLFVPLTLGLALIMGIVETCYYRTRKQFWKEASMFWQKLFGINF 94 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLA+EG++AFF+ESTFV + FFGW ++ Sbjct: 95 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAVEGILAFFMESTFVAVMFFGWKKVSA 154 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL LG+ +SA WILVAN WMQ P+ FN +TMR EM SF ++ L+P A K Sbjct: 155 GFHLASTWLTGLGATISAWWILVANAWMQYPVGQTFNPDTMRFEMNSFFDVALSPFAVDK 214 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F HTV S ++ GA+F++G+S+WY+LKGR+ A +S I G+ A L + GD S Y Sbjct: 215 FFHTVTSSWIIGAIFVVGVSSWYLLKGREKQLAVKSMKIGTIVGLCASLLAALTGDNSAY 274 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEE------ETNKFAIQIPYALGIIAT 297 ++ VQ KLAA+EA + + + G+P + + + I +P AL ++AT Sbjct: 275 QVAQVQPMKLAAMEALYNGGKTQSLSLVAGVPFGGQPDYRNVDEPPYKIGMPKALSVLAT 334 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+ L+ + + +G K S+ E+++ G Q+ + KKD Sbjct: 335 HDFDGYVPGINNLIDGYVKE--DGTKEPSVAEKMQRGRMAITALQQYRAGKKDEAT---- 388 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++ + ++ +P + +++FR+MV G L + +S R I Sbjct: 389 RKTLTDNIKYFGYGYVKSADQIVPNIPLNFWSFRVMVGLGILFILFFLISGHVSWRKDIS 448 Query: 418 E--KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 E +WL +A+ +PL ++A EAGW VAE GRQPW I ++LPT VA S L AG ++ + Sbjct: 449 EKRWRWLHISAIVLVPLAYVASEAGWVVAEMGRQPWTIQDMLPTWVAVSDLNAGSVMITF 508 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSSLK 505 L L+T L E+ ++FK + G + Sbjct: 509 FLFLALFTTMLAVEINILFKQIKKGMEAPA 538 >UniRef50_A6LFA3 Cytochrome D ubiquinol oxidase subunit I n=24 Tax=Bacteria RepID=A6LFA3_PARD8 Length = 518 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 208/512 (40%), Positives = 297/512 (58%), Gaps = 11/512 (2%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+ + AIMET+Y +G + +K +FW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYRTGNEAWKKTAQFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGWD++ Sbjct: 68 FAIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL +G+ LSALWIL+AN WMQ P+ FN +T+R EM F + L+PVA Sbjct: 128 KRFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAIN 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV SG++ GA+F+LGIS WY+LK R+ FA S ++A FG+ A + +I GD S Sbjct: 188 KFFHTVLSGWIVGALFVLGISCWYLLKKRNTEFALSSIKVSAIFGLVASILIIWTGDGSA 247 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQ-------EEETNKFAIQIPYALGII 295 Y++ Q KLAA+E +E GI + + F I+ P L + Sbjct: 248 YQVAQKQPMKLAAMEGLYEGGNGVG-LVGIGILNPAKTSYLDNQNAFIFDIKFPKLLSFL 306 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 A R ++ V G+ L+ + G A S E++ G + KD Sbjct: 307 AERDINAYVPGIVNLI-EGGYTTNKGTVALSAKEKIEKGKAAIKALADYRKAVKDKDTAA 365 Query: 356 LLKR--YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 + + + IP V +++FR+MV G + + ++ + Sbjct: 366 AGQYRVTLEENFPYFGYGYIKDPAELIPHVGLTFYSFRVMVILGCFFILLFIITLIWDKK 425 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIF 473 +I +WL L+ IPL +IA +AGW VAE GRQPWAI ++LPT+ + S L + Sbjct: 426 GKIANTRWLQYVGLWSIPLGYIAGQAGWIVAEVGRQPWAIQDILPTSASISKLNPSSVQT 485 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 + L L+T+ L+AE+ +M K + GP + Sbjct: 486 TFYLFLILFTILLIAEIGIMVKAIKKGPEAAA 517 >UniRef50_P94364 Cytochrome d ubiquinol oxidase subunit 1 n=83 Tax=Firmicutes RepID=CYDA_BACSU Length = 468 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 179/503 (35%), Positives = 264/503 (52%), Gaps = 59/503 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + + L+R+QFA T ++HFLFVP+++G+ F++A+MET+Y++ ++Y M KFWG LF I Sbjct: 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLAIE L+AFF+ES F+GL+ FGWDRL Sbjct: 61 NFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H WLV+ G+ +S+ WIL AN +MQ P+ F + R EM F L+ NP Sbjct: 121 PKKIHALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLW 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 V+F H + TGA FI G+SA+ +LK ++ F K+SF +A G+ A L V + G Sbjct: 179 VEFPHVIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + + Q K+AA E WE PAA+T F D + E + I++PYAL +A + Sbjct: 239 AEHLMESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFS 298 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V G+K L ++E+ G V+ F S + +G G+++ Sbjct: 299 GSVKGMKTLQAEYEKIYGKGDYI-------------PPVKTTFWSFRIMVGAGVVM---- 341 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + W R ++ KW Sbjct: 342 ---------------------------------------ILAALGGLWLNRRKKLENSKW 362 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICG 480 LR + I P++A AGW + E GRQPW + ++ TA + S +TAG L+FS++ Sbjct: 363 YLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGV 422 Query: 481 LYTLFLVAELFLMFKFARLGPSS 503 +Y + +FL + + G Sbjct: 423 MYMILGALLVFLFIREIKKGAEH 445 >UniRef50_C9MLX1 Cytochrome D ubiquinol oxidase subunit 1 n=3 Tax=Prevotella RepID=C9MLX1_9BACT Length = 511 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 211/504 (41%), Positives = 294/504 (58%), Gaps = 12/504 (2%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V+ SR QFALTA+YH+LFVPLTLG+A ++ IMET Y + K+ ++ +FW +LFGINF Sbjct: 12 TVDWSRAQFALTAIYHWLFVPLTLGLAVIMGIMETCYYRTRKEFWRSAAQFWQRLFGINF 71 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GVATG+ +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+ESTFV + FFGW ++ Sbjct: 72 AMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMESTFVAVMFFGWSKVSA 131 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ TWL LG+ LSA WILVAN WMQ PI FN ETMR EM SF ++ L+P A K Sbjct: 132 GFHLASTWLTGLGATLSAWWILVANAWMQYPIGCTFNPETMRNEMTSFLDVALSPFAIDK 191 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F HTV S +V GA F +G+S WY+L+ R AK+S I + G+ A L G ES Y Sbjct: 192 FTHTVTSAWVLGAAFTVGVSCWYLLRKRHVELAKQSIKIGSIVGLVASLLAASTGHESAY 251 Query: 244 EMGDVQKTKLAAIEAEWETQ-----PAPAAFTLFGIPD-QEEETNKFAIQIPYALGIIAT 297 + Q KLAA+EA +E A F PD E + +P L I+AT Sbjct: 252 MVAQTQPMKLAAMEALYEGGNSQSLTGIAMVNPFSQPDYMNESEPPMRVAVPNMLSILAT 311 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 +S V G+++++ + + +G K SL E+ G + + K Sbjct: 312 KSTTGYVPGVRDIIKGYTK--ADGTKEPSLKEKQERGKKAIQALKDYRAGKDKES----N 365 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++ + + +P + ++AFRIMV G L + + A+ + + + I Sbjct: 366 EKILDHDMKYFGYGYIKDANQLVPFIPINFWAFRIMVGLGGLFILVFAVMLFLLYKKDIT 425 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +WL + IPL +IA E+GW VAE+GRQPW I ++LPT A S L++G + F+ L Sbjct: 426 RPRWLQYLGIALIPLAYIASESGWLVAEFGRQPWTIQDMLPTWAAVSDLSSGGIAFTFFL 485 Query: 478 ICGLYTLFLVAELFLMFKFARLGP 501 L+T L AE+ +M K + GP Sbjct: 486 FLVLFTAMLTAEVSIMCKQIKKGP 509 >UniRef50_A1SF80 Cytochrome bd ubiquinol oxidase, subunit I n=22 Tax=Actinomycetales RepID=A1SF80_NOCSJ Length = 484 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 176/512 (34%), Positives = 263/512 (51%), Gaps = 52/512 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +DI++++R QF +T +YHFLFVPLT+G+ L+A+MET ++ + + + + KF+GKL I Sbjct: 1 MDILDVARWQFGITTVYHFLFVPLTIGLTLLVAVMETNWLRTARPEWLRLAKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALG+ TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFALGLVTGIVQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLV LG+ SA +IL AN WMQ+P+ ++N +T R E+ F ++ N V Sbjct: 121 PRKLHVGCMWLVHLGTLASAWFILAANSWMQHPVGYEYNPDTGRAELTDFWAVMTNKVQL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG---RDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + F H + + Y+T A FILGISAW RD + + + A + A L V V G Sbjct: 181 ITFPHVILAAYMTSAAFILGISAWLYANKRFERDRSMYRMGIRMGAWVALVAGLGVAVSG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAP-AAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 D G M DVQ K+AA EA ++T A F++F I + ++ K+++ +P L +A Sbjct: 241 DIQGKIMTDVQPMKMAAAEALYQTDSDGCAPFSVFTIGTPDGKSEKWSLTVPCVLSFLAE 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+ +L +++E G + + S + Sbjct: 301 GDTDATVEGIDDLRAEYQETYGQ----DPGAAYYSPGDYTPYIPVTYWSFR--------- 347 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 +M+ G L+ A AL W + R Sbjct: 348 ----------------------------------LMIGLGALMAAGAALVLWLTRKGRAP 373 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMV 476 +W L L +A GW E GRQPWA+ ++ TA S ++ + S+V Sbjct: 374 TARWFAPMVLSLPVLTVLANSFGWIFTEMGRQPWAVFGLMTTAHGVSPGVSQLEAWISIV 433 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 ++ LY + V E+ L+ K+ R G + Sbjct: 434 VLTLLYAVLAVIEVGLLVKYVRKGADPFEEPP 465 >UniRef50_Q2RGQ2 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Bacteria RepID=Q2RGQ2_MOOTA Length = 461 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 191/515 (37%), Positives = 266/515 (51%), Gaps = 60/515 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R QF +T++YHFLFVPLTLG++ L+AIMET+YV +G + YK+M +FWG+LF I Sbjct: 1 MDALLLARWQFGITSVYHFLFVPLTLGLSILVAIMETIYVRTGDETYKNMARFWGRLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EF FG NWS YS +VGDIFGAPLA+E L AFFLESTF+GL+ FGW++L Sbjct: 61 NFAMGVVTGIVQEFHFGMNWSEYSRFVGDIFGAPLAVEALAAFFLESTFLGLWIFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLVA SNLSA WILVAN +MQ P+ F R EM F L+ NP Sbjct: 121 SPALHAACIWLVAFASNLSAFWILVANSFMQEPVG--FTLRNGRAEMTDFFALLTNPHVL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F HTV +G+VT A F++GISA+++L+ +RSF +A G+ L V +G Sbjct: 179 YQFPHTVLAGFVTAAFFVMGISAYHLLRQSQLEPFRRSFRLALIMGLIGSLLVAGIGHLQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q K+AA EA W++ PA L + DQE + N I+IP +A S Sbjct: 239 GQHLVATQPMKMAAAEALWDS-ADPAPLALVALVDQENQQNNLEIKIPALTSFLAYNSFR 297 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GLKEL E+ G V F S + + Sbjct: 298 GEVKGLKELQAAAAEQYGPGNYI-------------PPVAPVFWSFRLMIA--------- 335 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 G L+ + S + + + + Sbjct: 336 ----------------------------------AGLWLILLSLYSLYLWRKGLLESRPL 361 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICG 480 +L+A L+ IP+P++A AGWFVAE GR PW + + A S ++A ++ ++V Sbjct: 362 VLKALLWSIPIPYLANTAGWFVAEVGRYPWIVYGLQRLEAAVSPGVSATAILTTLVAFTL 421 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 LY L V +++L+ K+AR G Sbjct: 422 LYGLLAVVDVYLLAKYARQGVVEQPPAGKMHPSGE 456 >UniRef50_A6L431 Cytochrome D ubiquinol oxidase subunit I n=10 Tax=Bacteroidales RepID=A6L431_BACV8 Length = 500 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 212/505 (41%), Positives = 301/505 (59%), Gaps = 15/505 (2%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 +++ SR QFALTAMYH+LFVPLTLG+A ++ +MET YV +GK+ +K+ KFW KLFGIN Sbjct: 8 SLIDWSRAQFALTAMYHWLFVPLTLGLAVIMGLMETFYVTTGKEFWKNTAKFWMKLFGIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIEG++AFF+E+TF+ + FFGW+++ Sbjct: 68 FAVGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWNKVS 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ TWL LG+ +SA WILVAN WMQ P+ FN ET+R EMV F+ + L+P+A Sbjct: 128 KRFHLASTWLTGLGATISAWWILVANAWMQYPVGMAFNPETVRNEMVDFAAVALSPMAIA 187 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 KF HTV S ++ GA+F++GIS WY+L+ R FA S +AA+ G+ A L GD SG Sbjct: 188 KFFHTVLSSWILGAVFVVGISCWYLLRNRQKEFALSSIKVAAAVGLFASLVTAWTGDISG 247 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 ++ VQ K+AA E FT+ G ++IP L I+AT +D Sbjct: 248 VQVAKVQPMKMAAAEGL-HDGGNGVPFTIAG-----------DLKIPKMLSILATHDIDG 295 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK--DLGYGLLLKRY 360 V G+ L ++ ++ +G A S E+++ G A D F K D ++ Sbjct: 296 YVPGINNL-LEGGYQMPDGTTALSAEEKIKRGQIAIAALDAFRKAHKAGDEASAAAARKT 354 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 + +P V +++FRIMV G + + + ++ + + Sbjct: 355 LDENVKYFGYGYIKDPAHLVPNVGLTFWSFRIMVGLGGYFILFFIIVLIVSKKEKLADMR 414 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 WL R AL+ IPL +I +AGW VAE GRQPWAI ++LP A S L G + + + Sbjct: 415 WLQRVALWTIPLAYIGSQAGWVVAEVGRQPWAIQDMLPVGAAISKLQTGSVQLTFFIFLL 474 Query: 481 LYTLFLVAELFLMFKFARLGPSSLK 505 L+T+ L AE+ +M K + GP +K Sbjct: 475 LFTVLLFAEIGIMLKAIKKGPEGIK 499 >UniRef50_O67370 Cytochrome oxidase d subunit I n=1 Tax=Aquifex aeolicus RepID=O67370_AQUAE Length = 468 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 196/509 (38%), Positives = 273/509 (53%), Gaps = 47/509 (9%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 +D V L+R+QFALTAMYHFLFVP+TLG++ LLAI+ T + Y+ + +F+ Sbjct: 1 MDAVLLARIQFALTAMYHFLFVPITLGLSLLLAIIWTKWAREEDDERHILYERIGEFFTT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INFA GV G+ +EF+FGTNWS YS VGDIFGAPLAIE + AFFLES F+G+ FG Sbjct: 61 LFAINFAAGVVAGIVLEFEFGTNWSEYSKTVGDIFGAPLAIEAIFAFFLESVFLGVLLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 DR+ + TW+VA+G+NLSALWILVAN W Q P F E + + SF + V+N Sbjct: 121 RDRVSPKFYAFSTWMVAIGTNLSALWILVANSWQQTPKG--FYLEGGKAYLASFFDAVVN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 +FVH +G +TGA+F+ GISA+Y+LK + AK SF IA + GM A L I+ Sbjct: 179 YSTPYRFVHMFLAGVITGAIFVAGISAYYILKRKHLDVAKESFRIAVTIGMIASLLQIIA 238 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD GY++ Q KLA +E +WET+ + G I+IP L I+A Sbjct: 239 GDLHGYQVARTQPLKLAMMEDKWETESGAGLEIVPG------------IEIPKLLSILAY 286 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 D V G+K+L+ ++ + L +L A Sbjct: 287 HDPDAKVYGIKDLVQTFQKIAKGEEVGEDELPELWLDPRQFA------------------ 328 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Q T++ IP +++ R MV GF I +L F +++ I Sbjct: 329 -----------GRQSLYITEEEIPPTWIPFWSLRGMVFLGFFFAFITSLGFIFTVQDTIE 377 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +++WLL+ Y IPLP +A GW VAE GRQPW + +L T A S L AG ++ S++L Sbjct: 378 QRRWLLKLFFYSIPLPIVANILGWIVAEVGRQPWVVYYILKTKDAASPLPAGQILTSIIL 437 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKT 506 +Y + + L LM + GP + Sbjct: 438 FSSIYFIVFLIFLGLMVQKVIKGPKRPEE 466 >UniRef50_B9L7C2 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Nautiliaceae RepID=B9L7C2_NAUPA Length = 524 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 198/521 (38%), Positives = 303/521 (58%), Gaps = 19/521 (3%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++E +R QFA+TA++HF FVP TLGM+F++A ET+YV +GK +K++T+FW +FGIN Sbjct: 5 SMLEWARAQFAMTALFHFFFVPFTLGMSFIVAFFETIYVKTGKAEWKEITQFWQLIFGIN 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+G++TG+ EF+FGTNWS YS VGD+FGAPLA+EG++AFFLE+TF + FFGW R+ Sbjct: 65 FAIGLSTGIIHEFEFGTNWSTYSWVVGDLFGAPLAVEGIVAFFLEATFAAIAFFGWKRVS 124 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIA--SDFNFETMRMEMVSFSELVLNPVA 180 K H+ +WL+A+GSNLSALWIL+ANG+MQ+P + +N + R+EM F ++ PVA Sbjct: 125 KGVHLTSSWLLAIGSNLSALWILIANGFMQHPTSEFYKYNIDNARLEMTDFFAMITQPVA 184 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 QVKF+H V+S Y A+F+LGIS+ Y+L+G+ FAK+S +AA+FG+ A + V+GDE Sbjct: 185 QVKFLHVVSSAYTLAAVFVLGISSLYLLRGKHKDFAKKSATVAAAFGLVASIFTAVIGDE 244 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP--------DQEEETNKFAIQIPYAL 292 YE+ + Q TK+AA E + A GIP + +E F I++P L Sbjct: 245 HAYEVANTQPTKIAAAEGLIVGEKG-APIVAIGIPKTVDPRNTNSNDEAFAFKIELPGML 303 Query: 293 GIIATRSVDTPVIGLKELM--------VQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQF 344 ++ R ++ V GLK+L+ E+ G KA L+ + + Sbjct: 304 SLLGKRDINAFVPGLKDLVNGNEKYGIWPFEKLHAEGAKAIEALKAYHTAKANGDKAGME 363 Query: 345 NSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAII 404 + + + AD P VAP++++F IMVA GF + + Sbjct: 364 AAKAEFYKVVADVNGVKVTRADLMGYGYLTDPTKLYPPVAPVFYSFHIMVALGFWFILLF 423 Query: 405 ALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS 464 L++ S+++ + + A+ +PLPWI GW AE GRQPW + VLPT+ + + Sbjct: 424 LLAYVSILKGTFENNTLVQKLAVLSVPLPWIGTSFGWMTAEIGRQPWTVFGVLPTSESVT 483 Query: 465 SLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 + ++ + L + + +AEL ++F + GP Sbjct: 484 PIALQNVQATFFLFLTAFVILGIAELKILFTVVKHGPKGAH 524 >UniRef50_C8XG67 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XG67_NAKMY Length = 484 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 172/518 (33%), Positives = 267/518 (51%), Gaps = 58/518 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + ++R QF +T +YHFLFVP+T+GMAF +AI ET +V + K +Y TKFWGK+F I Sbjct: 1 MDPLGIARWQFGITTVYHFLFVPITIGMAFFIAITETAWVRTRKPVYLRATKFWGKIFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAIGVVTGIVQEFQFGMNWSSYSRFVGDVFGAPLAMEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H WLV++G+ LSA +I+ AN +MQ+P+ N + R EM ++ P+ Sbjct: 121 SPRLHCACIWLVSIGTMLSAFFIMSANSFMQHPVGVTVNADRSRAEMNDIWAVLTQPLNM 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H +A ++GA GI++++++K RD + + + L+VIV GD Sbjct: 181 WAYSHVIAGAILSGAAMFAGIASYFLMKKRDVEVFRPAVRFGLVGMLIGSLAVIVTGDLL 240 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 M DVQ K+AA EA W+T A+F+LF I + + F+I++P L +AT S Sbjct: 241 AKVMTDVQPMKMAAAEALWDT-TEGASFSLFTIGTLDGSSEVFSIRVPGVLSFMATESFS 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V G+ ++ Q EE+ G + + + +G Sbjct: 300 GTVEGINDVQAQFEEQYGPGDYR-------------PIIPVAYWMFRIMMG--------- 337 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 GF++L + + W + R+ E K Sbjct: 338 ----------------------------------AGFVMLLVSIVGLWLTRKGRLPESKT 363 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV-ANSSLTAGDLIFSMVLICG 480 + R A++ I P + AGW E GRQPW + + T + S++ G ++ S+++ Sbjct: 364 VWRLAMFAIAGPVVGHSAGWIFTEMGRQPWTVVGLYRTEESVSPSVSGGSVLTSLIIFTL 423 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 LY + V E+ L+ K+ ++GP S + + + Sbjct: 424 LYGILAVVEVGLVVKYVKIGPPSEQEALASIRRGKPRS 461 >UniRef50_D1BLA4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Veillonella RepID=D1BLA4_VEIPT Length = 462 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 184/504 (36%), Positives = 265/504 (52%), Gaps = 61/504 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M + V+L+RLQFALT++YH+LFVP TLGM +A +E YV +GK++YK M KFWGKLF Sbjct: 1 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVTVAALEWTYVSTGKEVYKKMAKFWGKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EF FG NW+ YS ++GDIFGAPLA+E LMAFFLESTF+G++ FGWDR Sbjct: 61 INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 L K H V VALG+NLSA WILVAN +MQ+P+ F R EM +F +V N Sbjct: 121 LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVG--FVLRNGRAEMENFLTIVQNGYV 178 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H V +G +T + I+ ISAW++L+ F +RS + + G Sbjct: 179 PGQFFHIVLNGLLTAGVIIMAISAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALAGHH 238 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + VQ K+AA+EA WETQ PA F+L D + + N A++IP L + S Sbjct: 239 QGQYITKVQPMKMAAMEALWETQ-DPAPFSLVANIDTKAQKNTGALEIPGGLSFLTQNSF 297 Query: 301 -DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 V G+K+L + E + G V F + + + Sbjct: 298 TSGKVEGIKDLQAKSEAQYGPGNYI-------------PDVPAIFWTFRVMVA------- 337 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 G L+L + + ++++ E Sbjct: 338 ------------------------------------AGSLMLLVAFVGLILNAKDKLVEN 361 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLI 478 + L+ + +PLP+IA GWFVAE GRQPW + + TA S S+TA +++ +++ Sbjct: 362 RTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTTIIGF 421 Query: 479 CGLYTLFLVAELFLMFKFARLGPS 502 +Y + +A ++L + + GP Sbjct: 422 TLVYIVAAIAAIYLAVEHIKKGPD 445 >UniRef50_Q6ABD3 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Propionibacterium acnes RepID=Q6ABD3_PROAC Length = 506 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 174/522 (33%), Positives = 260/522 (49%), Gaps = 50/522 (9%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++R QF +T +YHF FVP+T+ ++ L+A+M+TV++ + Y +TKF+GKLF I Sbjct: 1 MDAQLIARWQFGITTVYHFFFVPITIALSMLVAVMQTVWLKTRNDRYLRLTKFYGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ EFQFG NWS YS +VGDIFGAPLA+E L+AFF+ESTFVGL+ FGW++L Sbjct: 61 NFALGVVTGIVQEFQFGMNWSEYSRFVGDIFGAPLALEALVAFFMESTFVGLWVFGWEKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ +L A+G+ +SA++IL AN WMQNP+ + +N T R E+ F ++ NPV + Sbjct: 121 PKGVHLACIYLTAIGTMISAVFILAANSWMQNPVGASYNPVTHRAELTDFGAVLSNPVFK 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK---------------GRDFAFAKRSFAIAASF 226 FVH ++S Y I I+ W++ K + + A Sbjct: 181 ATFVHQISSSYTVAGALIAAIAFWHLAKVARGRTTSQISDAEEVESVRTWRWASKFGAWV 240 Query: 227 GMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 + A + V++ GD G M D Q K+AA EA ++ F++ I +++ +A+ Sbjct: 241 LIVACVGVVLSGDYQGKVMTDAQPMKMAAAEAAYQNTSD---FSVLTIGNKDGSEEVWAL 297 Query: 287 QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 +IP LG + + V G+ EL K S S + N Sbjct: 298 KIPGMLGFLGNGKWGSQVKGINELKSYQVHEYTYHRKDGSQTPLQASYQNVLRQKIDANG 357 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 +K P V Y+ FRIM+ G + I + Sbjct: 358 IK------------------------------LEPNVPLSYWTFRIMITLGMIGGLIGLV 387 Query: 407 SFWSVIRNRIGE-KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS 465 ++ R + WL + LP A+ GW E GRQPW + VLPT A S Sbjct: 388 MLIAMRGGRNPKPHGWLTLFMIALPLLPLFAISFGWIFTEMGRQPWIVAGVLPTTAAVSP 447 Query: 466 -LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKT 506 ++AG ++FS + +Y + V E+ L +K + G L T Sbjct: 448 NVSAGSVLFSTIAYTVVYGILAVVEVGLFWKALKEGLPELST 489 >UniRef50_C5A673 Cytochrome bd ubiquinol oxidase, subunit I (CydA) n=2 Tax=Thermococcus RepID=C5A673_THEGJ Length = 503 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 162/520 (31%), Positives = 264/520 (50%), Gaps = 23/520 (4%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSR+QFALTA YH++FVP ++GMAF++ ++ T+ ++ ++ + KF+ K GI Sbjct: 1 MDPILLSRIQFALTAGYHWIFVPASIGMAFMVFLLWTMAAITNEKQWHKAAKFFSKWLGI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F LGV TG+ MEF+FG NWS YS +VG IFG PL +EGL AF LESTF+G+ FG DRL Sbjct: 61 FFVLGVPTGIVMEFEFGANWSQYSVFVGSIFGPPLMLEGLFAFALESTFLGVLLFGMDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + ++ V +GS+LS LWIL+AN W Q P + R E+ F V NP+ Sbjct: 121 PRAITWISSFFVFIGSSLSGLWILIANSWQQTPTGYII--QNGRAELTDFMGAVFNPLLV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI-VLGDE 240 ++ HT+ S +TGA + + A+Y+LK R A+ + AI + + + G Sbjct: 179 SQYTHTINSAILTGAYIVAAVGAYYLLKKRHVQVARSAVAIGVVVLAISAVIQLYPTGHA 238 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G + Q TKLAA E ++T+ A +FGI D++ + K AI IP L ++ Sbjct: 239 EGQVIAKYQPTKLAADEGLFKTEKG-APMIIFGIVDEKNQEVKAAIGIPKLLSWLSFGDW 297 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V+GL + + K+ + + Sbjct: 298 NAEVMGLHDAARYVWYEQVLNNPNF----------------ASEKDRKEFIETLMKAHGV 341 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 PN DA E ++ + VA +++A+R+M+ G L + I + ++ ++ + + Sbjct: 342 DPNAPDANEQMVKVLEEAL--PVAFMFYAYRVMIGLGTLFILIGLIGVLLLLLGKLYDAR 399 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLIC 479 W L+ + +PLPW+A EAGWF E GR PW + ++ T S ++A ++ +++ Sbjct: 400 WFLKVLVVTVPLPWLASEAGWFTHEVGRMPWMVWGMVTTNTGVSPNVSATHVLITLIGFV 459 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 +Y++ L + K R GP ++ + + Sbjct: 460 VVYSVLFYIWLHFVRKLIREGPEPVEGDVTAKPTPAVSVA 499 >UniRef50_B7GK14 Cytochrome bd-type quinol oxidase, subunit 1 n=93 Tax=Bacteria RepID=B7GK14_ANOFW Length = 467 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 187/513 (36%), Positives = 275/513 (53%), Gaps = 67/513 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D++ LSR QFA+T YHFLFVPLT+G+ L+A MET +V + +Y+ M FWGKLF Sbjct: 19 MSDVLLLSRFQFAITVFYHFLFVPLTIGLIVLIAWMETQHVRTKNPLYRQMADFWGKLFA 78 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF LGV TG+TMEFQFGTNWS YS Y+GDIFG+PLAIE L+AFFLESTF+G++ FG D+ Sbjct: 79 INFVLGVVTGITMEFQFGTNWSEYSKYMGDIFGSPLAIEALVAFFLESTFMGIWLFGKDK 138 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + W+VALG+N+SALWI+ ANG+MQNP+ R+E+ +F E+V NP A Sbjct: 139 ISPKLRAFSIWMVALGTNISALWIITANGFMQNPVGYI--ERNGRIELQNFWEVVTNPYA 196 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 FVHTV S Y+ GA F++ +SAW++L+ + F K+SF G+ A + +G Sbjct: 197 WHMFVHTVVSCYIVGAFFVMAVSAWHLLRKQHVEFFKKSFKYGLILGLIAATATPFIGH- 255 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 K A+ A+ + A L + + +E +QIP Sbjct: 256 -----------KSASFAAKMQPAKGAA---LEAVWETKESLPFHIVQIP----------- 290 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 ++ + L L + Sbjct: 291 ---------------------------------------DPKNERNIVEFLTIPKLGSYF 311 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 + D Q KD P V ++++FR+MVA G +A+ F+ +N++ E + Sbjct: 312 YTHSFDGKVVGFDQIPKDERPNVNIVFYSFRLMVALGLYFVALFWYGFYLYRKNKLVESQ 371 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 L+ +Y + LP++A+ AGW VAE GRQPW + ++ TA A S ++ +IFS+V + Sbjct: 372 RFLKLVMYSVLLPYVAINAGWVVAEVGRQPWTVYGLMRTAEAVSPISLSQIIFSLVSLVL 431 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ 513 YT+ L+A+++LM K+A+ GP + + Q Sbjct: 432 FYTILLIADVYLMLKYAKKGPYTSAATKGGEIQ 464 >UniRef50_C1ATB3 Cytochrome bd-type menaquinol oxidase subunit I n=13 Tax=Actinomycetales RepID=C1ATB3_RHOOB Length = 498 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 161/549 (29%), Positives = 254/549 (46%), Gaps = 84/549 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A L+A+M+T++V++GK + +TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPLIAVMQTMWVVTGKDHWYRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGD+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEGLVAFFLESTFLGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K+ H+ WLVA+G N SA +I+ AN +MQ+P+ + +N ET R E+ S L+ N A Sbjct: 121 PKLVHLATIWLVAIGVNASAYFIITANSFMQHPVGAVYNPETGRAELTSIWTLLTNNTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK--------------GRDFAFAKRSFA----IA 223 F H VA ++T F+ G+ W+M++ + A+ F +A Sbjct: 181 AAFPHVVAGAFLTAGTFVAGVGGWWMVRSMRKAKEATEPEVAKKHEETARTMFRPVTILA 240 Query: 224 ASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNK 283 +A+ + + + GD G M + Q K+A+ E+ T+ L E+ Sbjct: 241 LWVMVASGIGLAITGDIQGKLMFEQQPMKMASAESLCHTETGADFSILTVGTQNNCESIT 300 Query: 284 FAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQ 343 I+IP +A + D+ V G+ E+ ++EE G +L Sbjct: 301 QLIKIPGLTSFLADGTFDSTVEGVTEIQARYEEMYGPGNYKPNLFVT------------- 347 Query: 344 FNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAI 403 + + + +G + A + +P + Sbjct: 348 YWTFRAMIG-------WAAGSALLAVVGLWMTRGGRVPDKKWFGW--------------- 385 Query: 404 IALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV------- 456 ++ IP P++ AGW E GRQPW + Sbjct: 386 ---------------------LSIAVIPTPFLGNSAGWVFTEMGRQPWVVAPNPTGVDMI 424 Query: 457 -LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQ-- 513 L S+ + + S++ +Y V L+ ++ GP + Sbjct: 425 RLTVDQGVSNHSPWTVWVSLITFTVVYGALAVVWFTLIRRYTVEGPLEHDAHPPGDDHDE 484 Query: 514 SSTTTQPAR 522 +P + Sbjct: 485 PEEPGKPEQ 493 >UniRef50_C5NY61 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY61_9BACL Length = 460 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 152/502 (30%), Positives = 248/502 (49%), Gaps = 54/502 (10%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD + L+R+QFA T ++HF FVP+T+GM FL+AI E++YV +G + YK +TKF+G LF Sbjct: 1 MLDPLLLARIQFAATTVFHFFFVPITIGMVFLIAIFESIYVKTGDEHYKRITKFFGHLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+GV TG+ EFQFG NWS YS +VGD+FG LAIE L+AF+LESTF+G++ F W++ Sbjct: 61 INFAVGVVTGILQEFQFGMNWSEYSSFVGDVFGPSLAIEALLAFYLESTFIGIWIFSWEK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM---RMEMVSFSELVLN 177 + K H+ WLV++G+ +SA WIL AN +MQ+P+ + + + EM+ F +V N Sbjct: 121 INKKLHVMCIWLVSIGTLMSAFWILSANSFMQHPVGVKYVENGVIGKKAEMIDFFAIVKN 180 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P +F H V GA I GI++W ML+ + +++F ++ + L + V Sbjct: 181 PYLWNQFPHVVTMALTVGAFTIAGIASWKMLRKHEVEMFRKAFKVSIVAALIGSLGLFVT 240 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + K+AA EA +E A F++ DQ+++ + +++P L +A Sbjct: 241 GHSQMQYLVREYPMKVAAAEALYEDTGNSAPFSVLATIDQKQQKAEHYLEVPGMLSFLAY 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + + G+K L + +E+ + + V + S + G Sbjct: 301 DKFEGSLKGMKSLQKEMDEKYYPVVGKH--------IDYTPHVPTIYYSFRIMSGS---- 348 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 V L+ + + Sbjct: 349 ------------------------------------VGILILMALL---GTIYSFKRTET 369 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +K+W L+ + + + +A GW +AE GRQP+ I V+ T S + ++FS+++ Sbjct: 370 KKRWFLQLMPWTLLVAEVATACGWIMAEMGRQPFLIFGVMATESGVSPNSGASVLFSLLV 429 Query: 478 ICGLYTLFLVAELFLMFKFARL 499 C LYT+ + + Sbjct: 430 FCVLYTILGITQYIAFRYAMNK 451 >UniRef50_D1BV46 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Actinomycetales RepID=D1BV46_XYLCX Length = 499 Score = 374 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 157/532 (29%), Positives = 254/532 (47%), Gaps = 72/532 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+R QFA+T +YHF+ VPLT+G+A L+A M+T +V++ + + +TKF+GKL I Sbjct: 1 METLDLARWQFAITTVYHFILVPLTIGLAPLVAGMQTAWVVTKNERWLRLTKFFGKLLLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG WS YS +VGD+FGAPLA+E L AFF+ESTF+GL+ FGWDRL Sbjct: 61 NFALGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALAAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ WL+A+ +NLSA +IL AN WMQ+P+ + +N T R EM S ++ N Sbjct: 121 SKKVHLACIWLLAIATNLSAYFILAANSWMQHPVGTVYNEATGRAEMESIGAILTNSTLL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD----------FAFAKRSFAIAASFGMAAV 231 F HT+++ ++ F+ GI+ W+M++ + + + A + + Sbjct: 181 AAFPHTISAAFLVAGTFVSGIATWWMVRLVRSKKPELVALARDTYRPAVVLGAIVMLVSG 240 Query: 232 LSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTL-FGIPDQEEETNKFAIQIPY 290 + V + GD G M + Q K++A E E++ A L G + + I +P Sbjct: 241 IGVGISGDVQGRLMYEQQPGKMSAAEGLCESEEGAAFSLLTVGPWNPTCDDLTRVISVPG 300 Query: 291 ALGIIATRSVDTP---VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 + T P + G+ ++ + E R +A + + + + S Sbjct: 301 VASFLGTGHFSGPESALPGVNDVQREMEARFGATDEAGNPIS------YTPPLGITYWSF 354 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 R+M+ A+ + Sbjct: 355 -------------------------------------------RLMIGLAAFSAALALWA 371 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE---------VLP 458 W+ R R + WL R A+ IP P++A GW E GRQPW + +L Sbjct: 372 LWATRRGRTSDNPWLSRLAIVAIPAPFLASSFGWIFTEVGRQPWVVAPNPTGIDQVRLLT 431 Query: 459 TAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYH 510 ++++ G ++ S+++ LY V L+ ++A G + Sbjct: 432 ERGVSTAVPPGVVLASLIVFTLLYAALGVVWYRLIHRYAIEGVPQVHDESPE 483 >UniRef50_A1UHI1 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Actinomycetales RepID=A1UHI1_MYCSK Length = 487 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 166/537 (30%), Positives = 258/537 (48%), Gaps = 80/537 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+FVPLT+G+A +LA+M+T +V++ + +T+F+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFIFVPLTIGLAPILAVMQTAWVVTDNPAWYRLTRFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS +VGDIFGAPLA EGL+AFF ESTF+GL+ FGW RL Sbjct: 61 NFAIGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEGLVAFFFESTFIGLWIFGWSRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 ++ H+ W+VA+ N SA +I+ AN +MQ+P+ + +N E+ R E+ F L+ N A Sbjct: 121 PRLVHLACIWIVAIAVNASAYFIIAANSFMQHPVGARYNPESGRAELTDFGALLTNNTAV 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD-----FAFAKRSFAIAAS----FGMAAVL 232 F H VA +T F+ G+SA+ M++ + A+ + AA + A + Sbjct: 181 WAFQHAVAGALLTAGAFVAGVSAFLMVRAQRNVTEPTVEARTMYRPAAIGGSLLALVAAV 240 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYAL 292 + V GD G M D Q K+A+ E+ +T P L ++ + +PY L Sbjct: 241 GLFVTGDVQGKLMFDQQPMKMASAESLCDTATDPDFSILTVGTHNNCDSVIHVLDVPYVL 300 Query: 293 GIIATRSVDT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +A + G+ +L Q+EER G +L + + + + Sbjct: 301 PFLAEGQFSGVTLEGVNDLQAQYEERFGPGDYRPNLFVT-------------YWAFRAMI 347 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 G L+ + T + IP +A Sbjct: 348 GLLLVPVAFALVTVWLT-------RRGRIPHQRWYGWA---------------------- 378 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV--------LPTAVAN 463 + IP P++A AGW E GRQPW + + Sbjct: 379 --------------GVLTIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRMTVQDGV 424 Query: 464 SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 S+ +AG ++FS+V+ +Y V LM ++ GP H + + ++P Sbjct: 425 SNHSAGMVLFSLVMFTLVYGALAVVWFGLMRRYVLKGPQE------HDSEPAPPSKP 475 >UniRef50_D2S6J7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S6J7_9ACTO Length = 474 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 176/501 (35%), Positives = 259/501 (51%), Gaps = 58/501 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI--YKDMTKFWGKLF 59 +D+VELSR QFA T+++HF FV LT+G+AFL+A+MET + + Y MT F+G LF Sbjct: 1 MDVVELSRFQFASTSIFHFFFVSLTVGLAFLIAVMETFAFVRSDRRELYGKMTNFFGHLF 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 INFA+GV TG+ EFQFG NWS YS++VG+IFG PLA+E LMAFFLESTF+GL++FG D Sbjct: 61 LINFAVGVVTGIVQEFQFGMNWSEYSYFVGNIFGVPLALEVLMAFFLESTFIGLWWFGKD 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 RL + WLVA+G+ +SA WI++AN WM +P+ + + + F +V N Sbjct: 121 RLKPWMRLGAIWLVAIGTQISAFWIVLANAWMHHPVGYEVV--DGQARLTDFGAVVFNYK 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 A + F H S +V F+LGISA+++L+ +D RS I F + +V G Sbjct: 179 AWLYFAHVQGSAWVVAGFFVLGISAFHLLRRQDTDVYSRSLRIGLVFAAVGTVFSVVSGH 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q K AA+EA+WET +PA ++L + DQE N +++IPY I+A S Sbjct: 239 TEAQVAREDQPMKFAAMEAQWETSESPAPWSLVALIDQEARENTVSLEIPYVGSILAYNS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 ++ G+ +L Q++ E G V + S + + G LL Sbjct: 299 LEGRYEGINQLEEQYD-------------EAYGEGDYVPPVAWVYWSFRIMVAIGSLL-- 343 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 L A + L W R + Sbjct: 344 ---------------------------------------LATAFLGLFLWWRRRQGLDGT 364 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 +W LRA + IPLPWIA GW V E GRQP+ + +L S+ + G+++ +V + Sbjct: 365 RWFLRALVLFIPLPWIANFTGWMVTEMGRQPFMVYGLLTVEEGVSANSLGEVLAGLVGLW 424 Query: 480 GLYTLFLVAELFLMFKFARLG 500 +Y + +++L+ AR G Sbjct: 425 VVYLALIGLDVYLLTVTARAG 445 >UniRef50_Q3JHM6 Ubiquinol oxidase family protein n=382 Tax=Bacteria RepID=Q3JHM6_BURP1 Length = 617 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 136/520 (26%), Positives = 225/520 (43%), Gaps = 68/520 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++L+R+QFA T +H +F L++G+A +A++E ++ +GK YK + FW K+F + Sbjct: 153 SALDLARVQFAFTVSFHIVFPALSIGLASFIAVLEYRWLKTGKAYYKSLCLFWSKIFAVA 212 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F +GV +G+ M +QFGTNWS +S + G + G L E + AFFLE+ F+G+ FGW+R+ Sbjct: 213 FGMGVVSGVVMAYQFGTNWSGFSSFAGSVTGPLLMYEVMTAFFLEAGFLGIMLFGWNRVS 272 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H T +VA+G+ +S WIL +N WMQ P + ++ + ++ NP Sbjct: 273 PRAHFGATLMVAIGTLISTFWILASNSWMQTPQGFEIV--DGQVVPTDWFAIIFNPSFPY 330 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H + +V A+ + +AW++LKGR K+ F+++ + V+GD+ G Sbjct: 331 RLAHMAIAAFVVAALVVAATAAWHLLKGRRDKAVKKMFSMSLWLLLVLAPLQAVIGDQHG 390 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 Q KLAAIE WET+P A LFGIPD + +T ++A+ IP+ +I T S D Sbjct: 391 INTLRHQPAKLAAIEGLWETEPGGTALNLFGIPDMKAQTTRYAVSIPHLGSLILTHSWDG 450 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GLK Q F S + +G GL + Sbjct: 451 EIRGLKSFPPQDRP----------------------NSTVVFWSFRIMVGLGLAMIGLAA 488 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 K + R +A G + + +G + W+ Sbjct: 489 LAWLLRRRGRLYEAK----------WFHRFALAMGPTGFVSLLAG---WVTTEVGRQPWV 535 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 + V+ T+ A S L+ + S++ +Y Sbjct: 536 ------------------------------VYGVMRTSHAVSPLSTQQVSVSLMTFVVVY 565 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 L ++ M K R GP+ + + AR Sbjct: 566 FLVFGTGVYYMLKLMRKGPALPGD-TPDDAHDARPERTAR 604 >UniRef50_D0L441 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinomycetales RepID=D0L441_GORB4 Length = 523 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 155/571 (27%), Positives = 243/571 (42%), Gaps = 106/571 (18%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +++SR QF +T +YHF+ VPLT+G+A ++AIM+TV+ ++G + + TKF+GKLF I Sbjct: 1 MDALDVSRWQFGITTVYHFILVPLTIGLAPMIAIMQTVWHVTGNEQWLRATKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +V D+FGAPLA+EGL+AFFLESTF+GL+ FGW RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVADVFGAPLALEGLVAFFLESTFIGLWIFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WL A+G SA +I+ AN WMQ+P+ +++ E R M F ++ N Sbjct: 121 PRKVHLACIWLAAIGVTASAYFIIAANSWMQHPVGVEWDPERGRPAMNDFWAVITNNTTL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA--------------------------- 214 F H +A ++T F+ + W+M + A Sbjct: 181 AAFPHVLAGAWLTAGTFVAAVGIWWMARNTWRAKKLREAIETGDTSGMPKTTSPSQIDAT 240 Query: 215 ----------FAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQP 264 + + M + +++ + GD M Q K+A+ E+ ++ Sbjct: 241 PEDLERDARQLWRPVTRFSLWIIMISGVALFITGDLQAQIMFKQQPMKMASAESLCDSTT 300 Query: 265 APAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKA 324 A A F++ I Q N + G+ + H Sbjct: 301 AGAPFSVLSIGRQNNCDNV---------------DHVVEIPGMLSFLADHR--------- 336 Query: 325 YSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVA 384 ++ Q+ + G ++ P + Sbjct: 337 -----FDTPLQGVNQLQVQYQEALQMPG------------------------QNFAPNLF 367 Query: 385 PLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVA 444 Y+ FR M+ + + W R R+ E + AL IP P++A +GW Sbjct: 368 VTYWGFRAMITWALGSVVVALGGLWLTRRKRVVESRRFGFIALLMIPTPFLANSSGWIFT 427 Query: 445 EYGRQPWAIGE-----------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLM 493 E GRQPW + + A S+ TA + +++ LY V L Sbjct: 428 EMGRQPWVVAPNWQDNLDPTRIHMLVADGVSNHTAATVWVTLIGFTLLYGALGVVWFMLQ 487 Query: 494 FKFARLGPS-----SLKTGRYHFEQSSTTTQ 519 ++ GP+ H + S Q Sbjct: 488 RRYVIEGPATYDAIPPDEPSAHDDDSDEPKQ 518 >UniRef50_A0FKM8 Cytochrome D ubiquinol oxidase subunit (Fragment) n=3 Tax=Pasteurellaceae RepID=A0FKM8_PASHA Length = 419 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 267/419 (63%), Positives = 343/419 (81%) Query: 98 IEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAS 157 IEGLMAFFLESTFVGLFFFGW+RL K +H+ T+ VA GSN SALWILVANGWMQNPIAS Sbjct: 1 IEGLMAFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIAS 60 Query: 158 DFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAK 217 +FNFETMRME+ SFSELVLNPV Q KF+H YV GA+F+LGIS++Y+LKGRD FAK Sbjct: 61 EFNFETMRMELSSFSELVLNPVTQSKFLHNCNRSYVCGAIFVLGISSYYILKGRDLGFAK 120 Query: 218 RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQ 277 RSF++ ASFG+ A++SV+++GDESGYE+G Q TKLAA+E E+ETQPAPAA+ F IP+ Sbjct: 121 RSFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPNT 180 Query: 278 EEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTD 337 E N+F+I IPYA GIIATRS+D + GLK++ V +E+R+R GM AY LLE+LRSG+ Sbjct: 181 AEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSGNYT 240 Query: 338 QAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG 397 +A ++ F +++KDLG+GLLLK+YTPNV DATE QIQ+A ++IP V P ++AFR+M+ G Sbjct: 241 EADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRVMMLSG 300 Query: 398 FLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 FL+L +I +F +R ++ ++LLR L+G+PLPWIA+E+GWF+AEYGRQPWAI E+L Sbjct: 301 FLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQPWAIYEML 360 Query: 458 PTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 P V+NS+LT GDL F++ L+CGLYTLFLV E++LMFK+ RLGPS+LKTGRY+FEQS+ Sbjct: 361 PVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGRYYFEQSTK 419 >UniRef50_A9WS17 Cytochrome d ubiquinol oxidase subunit I n=10 Tax=Actinobacteria (class) RepID=A9WS17_RENSM Length = 536 Score = 366 bits (940), Expect = e-99, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 251/560 (44%), Gaps = 91/560 (16%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++++R QF +T +YHFL VPLT+G+ L+A+++T ++ + K Y MTKFWGKLF I Sbjct: 1 MEALDIARWQFGITTVYHFLMVPLTIGLGLLIAVLQTFWLRNKKPEYLRMTKFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FGAPLA+E L+AFF+ESTF+GL+ FGW +L Sbjct: 61 NFILGVATGLVQEFQFGLAWSEYSRFVGDVFGAPLAMEALLAFFVESTFLGLWIFGWKKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ LGS +SA +ILVAN WMQ+P+ R M + N A Sbjct: 121 PAKIHLVCLWIAVLGSVVSAYFILVANSWMQHPVG--VTVVDGRPRMTDAWAVFTNNTAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR------------------------------ 211 V F HT+ F+LGIS +++ K R Sbjct: 179 VAFPHTIFGALAVAGGFLLGISWYHLWKRRKLGIDTVDAKKRVVVGESAVVNGKVQHPGR 238 Query: 212 ---DFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAA 268 D RS I A M A + GD G M + Q K+AA EA + + + Sbjct: 239 DKTDHKVWIRSLRIGAVVAMIAFAGTAISGDLQGRLMFEQQPMKMAAAEAACQNGTSFSV 298 Query: 269 FTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRN--GMKAYS 326 ++ + + I+IP L +A T V G+ L+ +++ + Sbjct: 299 LSIGDVGAKNCNDVAAVIEIPGLLSFLAHGDFSTEVKGVNSLLPEYQAKYGTNLPDNPIY 358 Query: 327 LLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPL 386 + + + + +G+ Sbjct: 359 GDRAGQPIQYVPVMAVTYWGFRMMIGF--------------------------------- 385 Query: 387 YFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEY 446 G + ++F+ R + E KWL+R A++GI P+ A AGW E Sbjct: 386 ----------GGIAALAAFVAFFIARRGTVPESKWLMRLAVFGILAPFGANSAGWIFTEL 435 Query: 447 GRQPWAIGE-----------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFK 495 GRQP+ + + A + ++ G+LIFS+V +Y + L+ E+FL+FK Sbjct: 436 GRQPFVVAPNPQMTGIDPVFMFTAAAVSPGVSVGELIFSLVAFVAVYAVLLIVEVFLLFK 495 Query: 496 FARLGPSSLKTGRYHFEQSS 515 + R G S S Sbjct: 496 YVRGGVLSAMPELATPPDSE 515 >UniRef50_C9D1Z8 Cytochrome D ubiquinol oxidase subunit 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D1Z8_9RHOB Length = 512 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 129/520 (24%), Positives = 223/520 (42%), Gaps = 66/520 (12%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 L+R+QFA T +H +F ++G+A LA++ +++ + Q Y + +W K+F + Sbjct: 44 SAETLARIQFAFTVSFHIIFPAFSIGLASFLAVLNGLWMKTRDQTYLTLFNYWKKIFAVA 103 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F +GV +G+ M +QFGTNWS +S G + G +A E L AFFLE+ F+G+ FG +R+G Sbjct: 104 FGMGVVSGIVMSYQFGTNWSVFSDKAGPVVGPLMAYEVLSAFFLEAGFLGIMLFGRERVG 163 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + HM T +VA G+ +SA WIL N WMQ P E + + ++V NP Sbjct: 164 EKLHMFATAMVAFGTLMSATWILSVNSWMQTPAGFSI-AENGQFIPEDWWQIVFNPSFPY 222 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + VH V + ++T ++ + + A ++L+ R A+R F++A I GD G Sbjct: 223 RLVHMVLAAFLTTSLVVGAVGALHLLRDRSDQEARRMFSMAMWMAAIVTPLQIYAGDMHG 282 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + Q K+ A+E +E+ P A LFGI +Q E +A++IP +I S++ Sbjct: 283 LNTLEYQPAKVMAMEGHYESHPDGAPLILFGIVNQAERQIDYALEIPKLSSLILKHSLNA 342 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 P+ GL + E + ++ ++ L + + + L Sbjct: 343 PLDGLDTIPDDEEPPVAIVFYSFRVMVGLGFAMLGLGLWSLWARYRGTLFT--------- 393 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 L+ A +M GF+ + Sbjct: 394 --------------------TPWLHRAAILMGPTGFIAVL-------------------- 413 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 WI E G RQP+ + +L T+ + + + A + S+V +Y Sbjct: 414 ---------AGWITTEVG-------RQPYTVYGLLRTSDSLAPVAAPAVATSLVAFIIVY 457 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 A + + K P++ + G + PA+ Sbjct: 458 FFVFGAGTYYLLKMMNKRPATPRLGLRDGPIRTAGITPAQ 497 >UniRef50_Q1J2Z6 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Bacteria RepID=Q1J2Z6_DEIGD Length = 470 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 150/513 (29%), Positives = 227/513 (44%), Gaps = 59/513 (11%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++LSR QFA T+++H+ FVP T+G A ++AI++T+ +G +++T+F+G LF IN Sbjct: 8 SALDLSRFQFATTSIFHYFFVPFTVGFALIIAILQTIAYRTGDPKMENLTRFFGHLFFIN 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG+ EFQFG NW +S++VG+IFG PLA+E LMAFFLESTF+GL++FG ++ Sbjct: 68 FAVGVVTGIVQEFQFGMNWQGFSNFVGNIFGVPLALEVLMAFFLESTFLGLWWFGKGKIP 127 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + W+VALG+ +SA WI++AN WMQ+P+ + + R M +V NP Sbjct: 128 AWLSLASIWIVALGTTVSAFWIIIANAWMQHPVGFEI--KNGRAVMTDAWAIVTNPKGLE 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 F H A GA F+L +SA+++ + + + SF +A + VI G G Sbjct: 186 WFAHIWAGSLTVGAFFVLAVSAYHLRRRHNVEAFRVSFRVALLTALIGSAGVIAAGHTQG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 Q K AA A WET +L +P N+F I +PY +A + Sbjct: 246 QSAVRDQPMKYAAFSALWETPAGNQMPESLVALPSNTLRENRFEITVPYLGSFLAFNNFT 305 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 GL EL ++E R G V + + + +G G L+ Sbjct: 306 GKAKGLNELQAEYEARYGPGNYI-------------PFVWPVYWAFRVMVGLGFLMLLVA 352 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 P Sbjct: 353 LVYVWRWRQGKLDDPGRLYP---------------------------------------- 372 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L P +A GW E GRQPW + +L T A S+L ++ S+V + Sbjct: 373 ---LLLAMPLAPHLANFTGWIATEMGRQPWIVQGLLRTQDAVSNLPVQMVLLSLVAFWVV 429 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS 514 Y + ++FL+ + AR G Sbjct: 430 YLTLIGLDVFLLTRTARAGMHEPDVETPSLPAP 462 >UniRef50_P73159 Cytochrome oxidase d subunit I n=32 Tax=Bacteria RepID=P73159_SYNY3 Length = 483 Score = 362 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 169/518 (32%), Positives = 243/518 (46%), Gaps = 65/518 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + + V LSRLQFA+TA++H L+ LT GM L I+E +++ + Y +FW +L+ Sbjct: 5 LSNTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYV 64 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NF +GVATGL M FQFG NW+ +S VGD FG L EG MAF LE++F+G+ FGWDR Sbjct: 65 LNFGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDR 124 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + + H T LVA+G+NLS WIL AN W+Q P F + + + + NP Sbjct: 125 VPPLIHYLATILVAIGANLSTFWILSANSWLQTPAGGIFV--DGKFVVQDYFAAIANPFM 182 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F+H + T I GISAW +L GR F RS + MA I +G Sbjct: 183 VNSFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHL 242 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 S ++ Q KLAA+EA WET PA PAA+++ +P+ + E N + + IP AL I Sbjct: 243 SAEQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSIPGALSYILEL 302 Query: 299 SV--DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 D P+ GLK+ R+ V + S + + GL Sbjct: 303 KPQLDKPIQGLKDWAPVDRPRM---------------------VGLIYYSFRIMVAIGLF 341 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 + I Sbjct: 342 FAALMAVTVLQWLRGKLKPEI--------------------------------------I 363 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 ++KWLLRA ++ PL ++AVE GW V GRQPW + + TA + S+L G+++FS+ Sbjct: 364 SQQKWLLRAWVFAAPLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEILFSLT 423 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS 514 + +Y +FL+A L+ + R GP E S Sbjct: 424 GLSVMYIVFLIATLYFGSRIIRNGPDLTLPAPRGSEAS 461 >UniRef50_D0YUT7 Cytochrome D ubiquinol oxidase, subunit 1 n=3 Tax=Mobiluncus RepID=D0YUT7_9ACTO Length = 548 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 163/551 (29%), Positives = 262/551 (47%), Gaps = 70/551 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 +LD ++L+R QF +T +YHF+ VP T+GM+ L+A+MET++ +GK+ + T+F+GKLF Sbjct: 8 LLDSLDLARWQFGVTTVYHFILVPFTIGMSLLVALMETLWYRTGKEYWLKATRFFGKLFL 67 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFALGVATG+ EFQFG WS YS +VGDIFGAPLA E L++FF+ESTF+G++ FGW + Sbjct: 68 VNFALGVATGIVQEFQFGMGWSEYSRFVGDIFGAPLAFEALLSFFMESTFLGVWIFGWGK 127 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMV---SFSELVLN 177 + K H+ V WLV G N S LWI+ AN WMQ P+ + FN ET R E+ +F +V N Sbjct: 128 ISKKAHVVVAWLVMAGVNTSMLWIIGANSWMQRPVGAVFNPETGRAELNGALAFFSVVTN 187 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLK---------GRDFAFAKRSFAIAASFGM 228 + +H V S + A + GIS W+M++ + + + Sbjct: 188 STMWLAVLHVVTSSILLAATVVAGISIWWMVRAASQGGIGETEAREVWRPIARWGMTIML 247 Query: 229 AAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGI-PDQ-------EEE 280 AA L + G G + Q K+AA E + A F PD E Sbjct: 248 AAGLLTVASGHLQGQHLVYYQPAKMAAAEGLCAGESGNLALFAFSECPDPVLKEGAGENS 307 Query: 281 TNKFAIQ------IPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG 334 +K+ + IP LG +A S + G+ + + + + N K + Sbjct: 308 GSKYEVTEVGIGRIPGLLGFVAHNSFSRTIAGVADSSDRTQAMLENAQKYF--------- 358 Query: 335 STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV 394 KD + + A A P V P++++FR+M+ Sbjct: 359 --------------KDKAPNIDTTNTSGLRGKGDVAGYSWA--KYAPSVLPVFWSFRLMM 402 Query: 395 ACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 G + A+ L + R+ + L AL +P+P++ V GW + E GRQP+ + Sbjct: 403 GVGIFMAALAMLGLYQTRGGRVSTSRGLKNLALITLPMPFLGVSFGWIMTEIGRQPFIVY 462 Query: 455 E-------------------VLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFK 495 +L + ++ + + S+V+ LY + + L+ + Sbjct: 463 PNQDAFNADMTVQNAGAGVYMLTGDGLSGVVSPVEFLISLVVFTLLYLVLGIIWFKLLVR 522 Query: 496 FARLGPSSLKT 506 +++ G ++ + Sbjct: 523 YSKEGINTPAS 533 >UniRef50_D2L7C7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7C7_9DELT Length = 462 Score = 360 bits (923), Expect = 9e-98, Method: Composition-based stats. Identities = 149/521 (28%), Positives = 221/521 (42%), Gaps = 64/521 (12%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + D V LSRLQFALT +H F L++G+ L I+E +++ +G Y +FW F Sbjct: 4 LTDPVFLSRLQFALTTAFHITFPTLSIGLGLYLVIVEWLWLRTGDLDYYRQFRFWSGPFA 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ TG+ +EFQFGTNW +S +G+ FG L EG MAF LE+ F + FGW R Sbjct: 64 INFAVGIVTGIPLEFQFGTNWGPFSATIGNFFGHVLGFEGSMAFMLEAAFFYIMLFGWKR 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G H T +VA ++LSA WIL AN WMQ P + E + + + +P Sbjct: 124 VGPKMHFFSTIMVAFAASLSAFWILAANSWMQTPTGG--HIENGVFIVDDYLAAIFSPDL 181 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F+H + + +S +++ G++ AF +SF IAA + ++GD+ Sbjct: 182 PFAFLHMHLACLEVSLFVVGAVSGLWIVWGKNVAFFLKSFRIAAIAALVCAPLQALVGDQ 241 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 +G E+ +Q K+A IEA WET P A + L PD E E N F+I+IPY L ++ T Sbjct: 242 NGLEIARLQPAKVAGIEAHWETNPPGTGAFWNLVAWPDTENERNSFSIRIPYMLSLLVTH 301 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 S V GLKE + I ++ + + A+ + K L Sbjct: 302 SPTGTVPGLKEFPKEDRPPIIIPFYSFRFMVGIGFAMVGVALWTVWEWRKGGL------- 354 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 + FR A + L Sbjct: 355 --------------------RPENAPGRVWLFRAWGAMALGGYLAVILG----------- 383 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 W E GRQPW + ++ TA +S+LT G L S+ Sbjct: 384 ----------------------WITREVGRQPWMLYGLIRTADGHSNLTVGQLWTSLAGF 421 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 YT+ + M K + GP + + T Sbjct: 422 VVAYTILGCVFVIFMAKLFKKGPDMEELPPPGHARGRVTAA 462 >UniRef50_C8NKU6 Cytochrome D ubiquinol oxidase, subunit I n=23 Tax=Actinomycetales RepID=C8NKU6_COREF Length = 505 Score = 359 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 151/538 (28%), Positives = 247/538 (45%), Gaps = 72/538 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++++R QF +T +YHF+FVPLT+G+A L+A+M+T + ++GK+ + T+F+G + I Sbjct: 1 MDVIDIARWQFGITTVYHFIFVPLTIGLAPLVALMQTFWQVTGKEHWYRATRFFGTILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+G+ATG+ EFQFG NWS YS +VGD+FG PLA+EGL+AFFLES F+GL+ FGW ++ Sbjct: 61 NFAIGIATGIVQEFQFGMNWSEYSRFVGDVFGGPLALEGLIAFFLESVFLGLWIFGWGKI 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W+VA+ +N+SA +I+VAN +MQ+P+ + +N ET R E+ L+ NP A Sbjct: 121 PGWLHTASIWIVAIATNISAYFIIVANSFMQHPVGAVYNPETGRAELTDIVALLTNPTAL 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFG----MAAVLSVIVL 237 F H VA +T F++GI W++++ + F A G + A+++V V Sbjct: 181 AAFPHAVAGSLLTAGTFVVGICGWWLIRASKQESHR-MFRPALWMGWWTTVIALIAVAVT 239 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD M Q K+A+ E+ T+ P L + ++ I++P+ L +A Sbjct: 240 GDIQAKLMFQQQPMKMASAESLCHTETDPNFSILTIGTHNDCDSVIHLIEMPWVLPFLAE 299 Query: 298 RSVDT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + G+++L + E G A +L + S + +G Sbjct: 300 GRFTGVTLEGVQDLQAKAESLYGPGNYAPNLFVT-------------YWSFRAMIGL--- 343 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 K P + Sbjct: 344 ----MVGSLAIAFISWLLLRKGRTPTGRIARW---------------------------- 371 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV-------------LPTAVAN 463 +L IP+P++A AGW E GRQPW + + + Sbjct: 372 -----FAWGSLAVIPMPFLANSAGWIFTEMGRQPWVVHPNPESVGDPRTEMIRMTVDMGV 426 Query: 464 SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPA 521 S + +++ LY + V +L+ + +GP QS+ A Sbjct: 427 SDHAPWVVWVTLIGFTLLYFILFVIWFWLIRRAVLIGPPHESGPVGDASQSNQPGPSA 484 >UniRef50_C7HZB3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZB3_THIIN Length = 494 Score = 358 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 146/523 (27%), Positives = 226/523 (43%), Gaps = 62/523 (11%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + + L+R QF AM+H ++ PLT+G+A +L ME +V + Y KFW KLF Sbjct: 4 LQNPEFLARAQFGFIAMFHIMWPPLTIGLALVLFGMEAAWVKTKNVFYFHQVKFWTKLFL 63 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF +GV +G+ MEF FGTNW +S GD G L E MAF LE+ F+G+ FGW R Sbjct: 64 INFGVGVISGIPMEFSFGTNWGPFSTSAGDFMGNILGFETAMAFMLEAGFLGIMLFGWGR 123 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G H+ T +VA GS LSA WI+VAN WMQ P + + ++ + V NP Sbjct: 124 VGPKMHLFATGMVAFGSTLSAFWIMVANSWMQTPAG--VKLVDGKFAITNWYDAVFNPDL 181 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F H + + + G+SA+Y+LK R F + +F A I +GD Sbjct: 182 PYGFGHMFTAAIELSLVVMAGVSAYYLLKKRHVDFFRPAFKWAVISLFIVAPLQIFIGDS 241 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 +G + + Q KLAAIEA W T A + L IP+Q+++ N +A++IP L +I T+ Sbjct: 242 AGSSLAETQPAKLAAIEAHWHTNKPGEGAPWALLAIPNQKDQKNDWALEIPDGLSMIVTK 301 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 ++ V+GL + + A+ ++ A + +K Sbjct: 302 TMTGKVVGLDHFKPDDQPPVWIPFYAFRVMVAAGVFVAFMAFWTLWMLWRK--------- 352 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 + A ++ + + + V + Sbjct: 353 --RERMTAARISENKWLLRGWLLAVPAI-------------------------------- 378 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 + AVEAGW E GRQPW + ++ T+ S+L A +++S+ + Sbjct: 379 ---------------YAAVEAGWMTREVGRQPWIVYGMMRTSQGVSNLPADTVLWSLAMY 423 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPA 521 Y + V + R GPS + A Sbjct: 424 MLFYGVIGVTAFVFAARMIRKGPSFEDPPAAPGQGGKPEHAAA 466 >UniRef50_C9KPM6 Cytochrome D ubiquinol oxidase, subunit 1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPM6_9FIRM Length = 456 Score = 358 bits (918), Expect = 4e-97, Method: Composition-based stats. Identities = 165/513 (32%), Positives = 250/513 (48%), Gaps = 65/513 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYK----DMTKFWGK 57 +D + LSR QFA+T +YHFLFVP+TLG++ +A++ET YV + + +K + +F+G Sbjct: 1 MDALILSRWQFAITTVYHFLFVPVTLGLSIFVALLETCYVRTKRPAWKEASRKLVRFFGT 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 LF INF++GV TG+ EF FG NWS YS ++GDIFGAPLA+E L AFFLESTF+G++ FG Sbjct: 61 LFVINFSMGVVTGIVQEFHFGMNWSEYSRFMGDIFGAPLALEALTAFFLESTFLGIWLFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WD+L + H W+VA SNLSA WILVAN +MQ+P+ R EM F LV N Sbjct: 121 WDKLSEKVHCLCIWIVAFASNLSAFWILVANSFMQHPVGFAV--RNGRAEMTDFFALVTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIV 236 P ++ HT+ S T ++ +SAW +L ++ A F + + + + Sbjct: 179 PYVIGEYTHTLFSAIATAGFLVIAVSAWKVLHDEASRRAFTQTLKAGAVFMLFGLFATMG 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 G + V KL+++EA WET+ PA F + D++ N F + +P A + Sbjct: 239 SGHLQAQYIAQVNPMKLSSVEALWETE-DPAPFAIVADIDEDMHKNNFELTVPGAFSFML 297 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + V G+ ++ + E+ V F S Sbjct: 298 YNTPTGAVPGINQIQKDYSEKYGPDEYR-------------PDVTGLFWSF--------- 335 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 RIM+ G L++ + + + NR Sbjct: 336 ----------------------------------RIMIGLGGLMILLGLAAAYFGFTNRP 361 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSM 475 L+ + +PLP++A GW+VAE GRQPW + + T+ A S LT D+ +M Sbjct: 362 LACPCYLKVLPWLLPLPYLANSVGWYVAEAGRQPWIVFGLQKTSDAVSPNLTGADVWLTM 421 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 LY + +A L++ +F + S + GR Sbjct: 422 AGFTVLYLVLAIAALWIAMRFIKKTQISFEEGR 454 >UniRef50_B9DSY4 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Bacilli RepID=B9DSY4_STRU0 Length = 475 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 155/524 (29%), Positives = 252/524 (48%), Gaps = 68/524 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I L+R QFA+T ++HF FVP T+G F++AIMET+YV++ + YK MTKFWG + + Sbjct: 1 MTIETLARFQFAMTTVFHFFFVPFTIGTCFVVAIMETLYVVTKNEEYKKMTKFWGNIMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD-- 119 +FA+GV TG+ EFQFG NWS YS +VGDIFGAPLAIE L+AFF+ESTF+GL+ F WD Sbjct: 61 SFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAIEALLAFFMESTFLGLWMFTWDNK 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 ++ K H+ WLV GS +SA+WIL+AN +MQ+P+ + R +M F L+ N Sbjct: 121 KISKKLHVTFIWLVVFGSLMSAMWILIANSFMQHPVGYEVV--NGRAQMTDFFALINNHQ 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRD-----FAFAKRSFAIAASFGMAAVLSV 234 + +F H + G + I G+SA+ +LK + K+S + + +SV Sbjct: 179 FRYEFGHVITGAITMGGIVIAGMSAFKLLKKEELTESVQKIYKKSLRLGLLVSLLGSISV 238 Query: 235 IVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGI 294 + +GD + + Q K AA+E ++E PAA+T+ ++ ++ F I+IPY L I Sbjct: 239 MGVGDLQMKALINDQPMKFAAMEGDYEDSGDPAAWTVIAWANEAKKEQVFGIKIPYMLSI 298 Query: 295 IATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYG 354 ++ V G+ + L+ + + V F + + Sbjct: 299 LSYGKPSGSVKGMDTANKE-------------LVAKYGQDNYFPMVNLLFYGFRTMAAF- 344 Query: 355 LLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRN 414 G ++L + AL + Sbjct: 345 ------------------------------------------GTMMLGVSALGLFLTRPK 362 Query: 415 R--IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDL 471 + + + KW+L P+++ GW + E GR PW + + + S ++ L Sbjct: 363 KPILYDHKWMLAIVALTTVAPFLSNTFGWIITEQGRYPWTVYGLFKIKDSVSPNVSVASL 422 Query: 472 IFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 +FS + L++ ++L+ + + GP + +SS Sbjct: 423 LFSNTVYFLLFSCLGAMMVYLVIRELQKGPEHEEVLLQGLAKSS 466 >UniRef50_Q4ZNG0 Cytochrome bd ubiquinol oxidase, subunit I n=15 Tax=Proteobacteria RepID=Q4ZNG0_PSEU2 Length = 479 Score = 355 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 143/522 (27%), Positives = 232/522 (44%), Gaps = 69/522 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 L+ ++L+R+QFA T +H LF +T+G+A LA++E +++ + +Y+D+ FW K+F + Sbjct: 4 LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW+R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H T +VA+G+ +S WIL +N WMQ P + R+ + +V NP Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQGFEI--IDGRVIPTDWFAVVFNPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H + +V A F+ +AW++L+GRD ++ ++A + V+GD Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPA-PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G Q K+AAIE WE P LFGIPD +EE K+A++IPY +I T S+ Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSL 301 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 D V LKE + ++ ++ L + + + L Sbjct: 302 DKQVPALKEFKPEDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTL--------- 352 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 +S P + + M G + + IG + Sbjct: 353 ----------------YNSRPFLYLALW----MGPSGLIAILAG------WFTTEIGRQP 386 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480 W++ ++ TA A+S + + ++VL Sbjct: 387 WVVYG------------------------------LMRTADASSGHSVAQMSITLVLFVV 416 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 +Y + L M + R GP + H T PAR Sbjct: 417 VYFVLFGTGLGYMMRLVRKGPKAYVEHVPHGGPGQQRT-PAR 457 >UniRef50_B0TEW6 Cytochrome bd ubiquinol oxidase, subunit i n=5 Tax=Bacteria RepID=B0TEW6_HELMI Length = 451 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 165/456 (36%), Positives = 246/456 (53%), Gaps = 14/456 (3%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V LSR+QFA+TA +HF+F PLT+G+A+L+ +M+T Y+ +G+++Y+ M++FW K+F I Sbjct: 1 MDVVLLSRIQFAVTAGFHFIFPPLTIGLAWLIVLMQTRYLQTGEELYQKMSRFWLKIFAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GVATG+TMEFQFGTNWS YS +VGDIFG PLA E + AFFLES F+G+ +G DR+ Sbjct: 61 SFVVGVATGITMEFQFGTNWSEYSRFVGDIFGGPLAAEAIFAFFLESAFMGVLIWGADRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K + + +VA+GS LSALWI++AN W Q P ++ R E++ F +LN Sbjct: 121 SKKVYWFSSLMVAVGSTLSALWIIIANSWQQTPAG--YHIVNGRAELIDFKAALLNASTV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +++HTV +TGA F++ ISAWY+L+ R+ AFAK+S A + A L+ I +G Sbjct: 179 PRYLHTVDGALITGAFFVIAISAWYLLRRREVAFAKKSMKYALFLALVASLAQIPIGHMH 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAAIE +ET+ A+ LFGIPD++ F + IP AL ++AT D Sbjct: 239 AVQVAQTQPEKLAAIEGLFETEKG-ASLLLFGIPDEKAGVTHFRLGIPKALSLLATGDPD 297 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GLK + + + L+ L + ++ + K L L + Sbjct: 298 GEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWLMSKGTLQDNRLFLKLA 357 Query: 362 ----PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGF----LLLAIIALSFWSVIR 413 P A E A P +Y R + + + + F + Sbjct: 358 LWSVPLPFIANEVGWIAAEVGRQP--WIVYKLLRTVDGISYTVPAWQILASIILFVLIYS 415 Query: 414 NRIGEKKWLLRAALYGIPLPWI-AVEAGWFVAEYGR 448 +LLR L P + A E GR Sbjct: 416 LLFVVWFYLLRKKLAAGPEAFATANGVAKSGTEVGR 451 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 1/167 (0%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 LG L D ++ ++ P V + F +MVA G L + W Sbjct: 282 LGIPKALSLLATGDPDGEVQGLKAFPEEERPPVFLPFVTFHLMVALGTLFILFSIWGIWL 341 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAG 469 + + + + + L+ AL+ +PLP+IA E GW AE GRQPW + ++L T S ++ A Sbjct: 342 MSKGTLQDNRLFLKLALWSVPLPFIANEVGWIAAEVGRQPWIVYKLLRTVDGISYTVPAW 401 Query: 470 DLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 ++ S++L +Y+L V +L+ K GP + T + + Sbjct: 402 QILASIILFVLIYSLLFVVWFYLLRKKLAAGPEAFATANGVAKSGTE 448 >UniRef50_UPI0001C15DA7 Cytochrome bd ubiquinol oxidase, subunit I n=2 Tax=Nostocaceae RepID=UPI0001C15DA7 Length = 458 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 161/507 (31%), Positives = 242/507 (47%), Gaps = 65/507 (12%) Query: 20 FLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGT 79 L+ LT GMA L ++E +++ + Y +FW KL+ +NF +GVA+GL M FQFG Sbjct: 1 MLWPVLTTGMAIYLVVIEGLWLKTHNLEYYHHARFWSKLYVLNFGIGVASGLPMAFQFGL 60 Query: 80 NWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNL 139 NW+ +S VGD FG L EG MAF LE++F+G+ FGWDR+ V H T LVA G+NL Sbjct: 61 NWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVPPVIHWISTILVAFGANL 120 Query: 140 SALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFI 199 S WIL AN W+Q P +F + + + + + NP F+HT + T I Sbjct: 121 STFWILSANSWLQTPAGGEFIA--GKFVVQDYFQAIANPFMVNSFLHTFFATLETSLFVI 178 Query: 200 LGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAE 259 GISAWY++ R F RSF + + + + +G S ++ Q KLAA+EA+ Sbjct: 179 GGISAWYIINQRRTEFFLRSFKVILAIAIVIAPLQVFIGHLSAEQVYHYQPAKLAAMEAQ 238 Query: 260 WETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGII--ATRSVDTPVIGLKELMVQHE 315 WET PA PA ++L +P+ + E N++ I++P AL + +D PV GLKE ++ Sbjct: 239 WETVPAGEPADWSLLAVPNNKVEKNEWEIKVPGALSYLLELKSKLDQPVKGLKEWEPKNR 298 Query: 316 ERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQA 375 ++ V + S + +G GL L + Sbjct: 299 PQM---------------------VGLIYYSFRIMVGIGLFLAGLMLITVIQWLSGKLST 337 Query: 376 TKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWI 435 T I ++KWL+RA ++ PL +I Sbjct: 338 T--------------------------------------TITQQKWLMRAWIFAGPLGYI 359 Query: 436 AVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFK 495 AVE GW V GRQPW + L T A S + G+++FS+V + +Y +F VA L+ + Sbjct: 360 AVETGWIVRCVGRQPWIVYGELRTVDAASHIPPGEVLFSLVGLMSMYAVFFVAALYFGSR 419 Query: 496 FARLGPSSLKTGRYHFEQSSTTTQPAR 522 R GP+ + + +PA+ Sbjct: 420 IIRKGPNLELPAPRTIIKPAIDIEPAQ 446 >UniRef50_A8VUL6 Aspartate-semialdehyde dehydrogenase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VUL6_9BACI Length = 452 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 160/435 (36%), Positives = 229/435 (52%), Gaps = 15/435 (3%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD++ LSRLQF TA+ H++F+PLT+G+A +A ME Y + +Y M +FW KLF Sbjct: 1 MLDVLLLSRLQFTFTAVVHYIFIPLTIGLAVFIAYMEFRYWRTKDPLYDKMARFWTKLFL 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INF +GVATG+TMEFQFGTNW+ YS +VGD+FGAPLA EG+ AFFLESTF+GL FG D+ Sbjct: 61 INFGVGVATGITMEFQFGTNWAAYSRFVGDVFGAPLAAEGVFAFFLESTFIGLLVFGRDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + + +VA+G++LS WI+ AN W Q P N E R EMVSF+E++ NP Sbjct: 121 ISRGMRFFAALMVAVGTSLSGFWIIAANSWQQTPQGHIINEELNRAEMVSFAEVIFNPST 180 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 V+++H + ++T AMFI+ ISA++++K ++ AKRS + G+ + G Sbjct: 181 MVRYLHVMEGAFITAAMFIVAISAYFIIKKKNLPLAKRSMKMGIVVGLVFSVLQAFSGHS 240 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 +G+ Q KLAA EA WET+ A A LF IPD E E N+F I IP L + V Sbjct: 241 HAQLVGETQPEKLAAYEAHWETE-ANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDV 299 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V GLKE + + A+ ++ + + K +L L + Sbjct: 300 NAEVTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKT 359 Query: 361 T----PNVADATEAQIQQATKDSIPRVAPL----------YFAFRIMVACGFLLLAIIAL 406 P A A A P A +M++ G + L Sbjct: 360 AFWMLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYSFL 419 Query: 407 SFWSVIRNRIGEKKW 421 + V + +K+ Sbjct: 420 VWLMVYLMKKEVRKF 434 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%) Query: 309 ELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADAT 368 +L+ + + +A+ E + + ++G +L T + +A Sbjct: 243 QLVGETQPEKLAAYEAHWETEANAPLLLFAIPDHENERNRFEIGIPGMLSFLTYDDVNAE 302 Query: 369 EAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALY 428 +++ + P V + AFR+MV G +L+ + W + + EK+ L++ A + Sbjct: 303 VTGLKEFAAEDRPPVLGNFIAFRVMVTAGIILIGFFMVMAWQWRKGNLFEKEKLMKTAFW 362 Query: 429 GIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVA 488 +PLP+IA AGW VAE+GRQPWA+ VL T A S LTA +++ S+ L +Y+ + Sbjct: 363 MLPLPYIANTAGWIVAEWGRQPWAVFGVLRTEDAVSHLTAVEVMISLGLFIAIYSFLVWL 422 Query: 489 ELFLMFKFARLGPSSLKTGRYHFEQSST 516 ++LM K R ++T H + Sbjct: 423 MVYLMKKEVRK--FDMETSMKHLDHPKE 448 >UniRef50_D2S1W7 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1W7_9EURY Length = 474 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 146/529 (27%), Positives = 230/529 (43%), Gaps = 70/529 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 MLD V SR+QFALT + H +F +++G+A L + S +Y+ + +FW ++F Sbjct: 1 MLDPVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDNAVYEQLRRFWTRIFA 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 ++FA G TGL +EF+FGTN++ +S G++FG PLA+EG+MAF LE+TF+G+F FG +R Sbjct: 61 VSFATGTVTGLVLEFEFGTNFAAFSTTAGELFGGPLALEGMMAFMLEATFLGIFVFGRER 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRM--EMVSFSELVLNP 178 + + + V LG+ LSA+WIL+AN WMQ P + E + +V LNP Sbjct: 121 VSDRLYFLSSVAVGLGTWLSAVWILIANSWMQTPRGFEVVMEDGQPIVHLVDPIAAYLNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGR-------DFAFAKRSFAIAASFGMAAV 231 FVH + + A+ + GI+A+Y+ + + F +++ IA + Sbjct: 181 RFPWMFVHMQNAAVESVALIMAGIAAYYVFRHHIWKYPIDNIEFWEKTLKIALVALVITA 240 Query: 232 LSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYA 291 + GD + + Q K AA+EA WET + P ++ Sbjct: 241 PLQAIHGDLYARHIVETQPQKFAAMEAIWETDSYV-PEYIVAFPTSIQDLL--------- 290 Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 + G L SG QA N + Sbjct: 291 ---------------------DLRAKEIFGFGIPGGASWLASGGDPQATIQGLNEFEGP- 328 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 P VA ++++FRIMVA GF + + + Sbjct: 329 ----------------------------QPPVAIVFWSFRIMVALGFWFILLAFWGVYRW 360 Query: 412 IRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGD 470 R + E L +A + PL +AVE GW V E GRQPW I V+ T+ + S LT + Sbjct: 361 WRGELYEDDLLHKALMLSAPLGLVAVELGWIVTEVGRQPWVIQGVMKTSDSVSPGLTGAE 420 Query: 471 LIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 ++V +Y L +++ + R GP S ++ Sbjct: 421 ATATLVGFAIVYLCLLTLYTYVIVRIIRAGPPDGDELTTTESSSPPQSE 469 >UniRef50_A5VIU9 Cytochrome bd ubiquinol oxidase, subunit I n=111 Tax=Bacilli RepID=A5VIU9_LACRD Length = 472 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 157/513 (30%), Positives = 248/513 (48%), Gaps = 60/513 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + I+ L+R QFA+T +YHF FVP ++G AF++AIME++YV + + YK M KFWG +F + Sbjct: 1 MTILSLARFQFAMTTVYHFFFVPFSIGTAFIVAIMESMYVSTKDETYKKMAKFWGNIFLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TGL EFQFG NWS YS ++GDIFGAPLA+E L++FF+ESTF+GL+ F W ++ Sbjct: 61 SFAVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLALEALLSFFIESTFIGLWVFTWKKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ W+ + GS SALWIL AN +MQ+P+ + + R MV+F L+ NP Sbjct: 121 KPGLHLFFIWMTSFGSLTSALWILTANSFMQHPVGYEI--KGGRAVMVNFGALLKNPQLW 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-----DFAFAKRSFAIAASFGMAAVLSVIV 236 +F H + + + G + I G++A+ +LK + + F K+S + + + I Sbjct: 179 YEFGHVILNAIMMGGIIIAGLTAFQLLKNQKLSEANKKFYKKSMRLGLLVSLIFSIGGIA 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 LGD + Q K AA E + T A +T+ GI D ++ K I IPYAL I++ Sbjct: 239 LGDAQMQYLIKEQPMKFAATEDVFTTTGKHAPWTIVGIADMKDHEVKGNIDIPYALSILS 298 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 V G+ EL Q++++ + Y + L + + +G + Sbjct: 299 YHKTTGAVTGMNELNAQYKKKYGKNLDYYPPVNTLFYSFRIMCAVGAWIFLVSLVGLIMT 358 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 ++ +A A A +P + Sbjct: 359 REKSKKPLAQRRWALWCIAITTFLPFIG-------------------------------- 386 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSM 475 AGWFV E+GR PW + + A + S ++ G L+ S Sbjct: 387 --------------------NTAGWFVTEFGRIPWTVYGLFTIAESVSPNVSVGSLLTSN 426 Query: 476 VLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 ++ L+T + ++L+ R PS + Sbjct: 427 IVYFVLFTTLAITLIWLIVLELRKDPSEAIEPK 459 >UniRef50_D2R730 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R730_9PLAN Length = 490 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 157/532 (29%), Positives = 235/532 (44%), Gaps = 81/532 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSRLQFA T M+H+LF PLT+G+ +L +E +++ + IY+ +FW K+FG+ Sbjct: 1 MDVLLLSRLQFAFTIMFHYLFPPLTIGLGIMLVYLEGMFLWTKTPIYETAARFWTKVFGL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ L FGWDR+ Sbjct: 61 NFALGVVTGIVMEFEFGTNWAAYSRYVGDVFGSALAAEGIFAFFLESGFLSLLLFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFET------MRMEMVSFSELV 175 G H T +VA+G S++WI VAN W Q P + +R E+V F +V Sbjct: 121 GPKMHFFATCMVAIGGIFSSVWITVANSWQQTPAGHVIREQVINGHVFLRAEIVDFWAMV 180 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 NP + +H +V GA F++ ISAWY+LK R FAK+SF A F + + Sbjct: 181 FNPSTVNRLIHVWLGAFVLGAFFVMSISAWYLLKKRHLEFAKKSFGGALIFATVSSYLQL 240 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 G + Q KLAA+E + TQ A LFG PD + + K+ I IP L ++ Sbjct: 241 ASGHFQAEGVAHHQPAKLAAMEGLYTTQKQ-APVYLFGWPDSQTKQVKYGIPIPGMLSLM 299 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 T + V GL +L V F + + G+ Sbjct: 300 VTGDSNQEVRGLDQLDPIW---------------------GTPPVWITFQAYHIMIAIGM 338 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 + T+ + + + FL Sbjct: 339 IFIVSCTYSCFLLYRGTLYETR-------WVLWYHVFALGLAFL---------------- 375 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG----------EVLPTAVANSS 465 + W++ E G RQPW + + +A + + Sbjct: 376 -------------ANEMGWVSAEVG-------RQPWIVYPTLVDGLPTGGLRTSAALSEA 415 Query: 466 LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 + A ++ S++ +Y L V + L+ + GP +S Sbjct: 416 VIAEQVLGSIIFFAIVYGLLFVLWITLLHQKISHGPDDHAKESGEHPRSDQP 467 >UniRef50_B1VE36 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Bacteria RepID=B1VE36_CORU7 Length = 571 Score = 350 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 158/594 (26%), Positives = 247/594 (41%), Gaps = 129/594 (21%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QF +T +YHF+FVPLT+G+A L+A+M+T + ++ K + T+F+G + + Sbjct: 16 LDTVALSRWQFGITTVYHFIFVPLTIGLAPLVALMQTFWAVTKKPHWYRATRFFGVVLLV 75 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ EFQFG NWS YS VGD+FG PLA+EGL+AFF+ES F+G++ FGW R+ Sbjct: 76 NFAMGVATGIVQEFQFGMNWSEYSRMVGDVFGGPLALEGLVAFFMESVFLGIWIFGWGRI 135 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H W VAL NLSA +I+VAN +MQ+P+ ++FN ET R E+ L+ NP A Sbjct: 136 PTWLHTLSIWAVALAVNLSAYFIIVANSFMQHPVGAEFNPETGRAELTDIVALLTNPTAL 195 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD----------------------------- 212 F H VA ++T F+LG+S W+++K Sbjct: 196 AAFPHAVAGSFLTAGTFVLGVSGWWLIKDARAKAKTATTTQDGLALDNAPAAEASASGTN 255 Query: 213 -----------------------FAFAKRSFAIAASFGM----AAVLSVIVLGDESGYEM 245 A G+ + + V + GD M Sbjct: 256 TAATDTAPSKATAPSSENTAATSDDDRHSMHRPAMKVGLWTTILSSIGVFITGDIQAKLM 315 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT-PV 304 Q K+A+ E+ T+ P+ L E+ ++ P+ L +A + Sbjct: 316 FVQQPMKMASAESLCHTETDPSFSILTIGTHNNCESVIHVLKAPFVLPFLAEGKFSGVTL 375 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 G+ +L + E G + +L + S + +G Sbjct: 376 QGVMDLQEKAEALYGPGNYSPNLFVT-------------YWSFRAMIG------------ 410 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW--- 421 +MV LA+ ++ + R+ + KW Sbjct: 411 ---------------------------LMVGS----LALAFFAWLFTRKGRLPKGKWATI 439 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEV-------------LPTAVANSSLTA 468 L IP P++A +GW E GRQPW I + S Sbjct: 440 FSWGCLAAIPFPFLANSSGWIFTEMGRQPWVIHPNPESVGDPRTESIRMLVDHGGSGHEP 499 Query: 469 GDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 +I ++V +Y + V +L+ + GP + +S+ + + Sbjct: 500 WVVIVTLVGFTLIYGILAVVWFWLIRRVVLDGPPAESGPEAVASESTEDDEEKQ 553 >UniRef50_D0WNB9 Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNB9_9ACTO Length = 487 Score = 349 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 148/527 (28%), Positives = 246/527 (46%), Gaps = 74/527 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ EL+R QF +T +YHF VPLT+G++ L+A+M+T SG ++ T F+GK+ I Sbjct: 1 MEAFELARWQFGITTVYHFYQVPLTIGLSTLVAVMQTKARRSGDPAWQKATDFFGKILLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGVATG+ EFQFG NWS YS +VGDIFGAPLA E L+AFFLESTF+GL+ FG +RL Sbjct: 61 NFALGVATGIVQEFQFGMNWSEYSRFVGDIFGAPLAFEALLAFFLESTFLGLWIFGKNRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMV---SFSELVLNP 178 H WL+A+G+ LS +IL AN +MQNP + N +T R+E+ F ++ + Sbjct: 121 SPRLHNMCIWLLAIGTMLSGFFILAANSFMQNPTGAVVNRQTGRLELDGVGGFFRVLFSE 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDF--------AFAKRSFAIAASFGMAA 230 + F HT+++ ++ + G+ W+M + R + K + + + + Sbjct: 181 TSLYTFAHTISAAFLVAGGLVAGLCFWWMARSRRKTGSEEEARKYWKPAAKVGLVAMLVS 240 Query: 231 VLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPY 290 I G G + D+Q K AA+ E+ + + + + + + + P Sbjct: 241 SCIAIGSGHFMGQHVKDIQPAKAAAMMGVCESGESHD--LVIAMWTSDCDGPQLTLPFPG 298 Query: 291 AL-GIIATRSVDTP---VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 L +AT + GL ++ + + + + + + F S Sbjct: 299 GLESFMATNHFSGKESFLKGLDDVNAELKAKYADVYGSDQ--------DYRPNLTVAFWS 350 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 + +G GFL LA+ Sbjct: 351 FRAMMGI-------------------------------------------GFLGLAMSIF 367 Query: 407 SFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE------VLPTA 460 +S+ ++I + + + R L IPLP++ GW + E GRQPW + ++ Sbjct: 368 GLYSLRGDKIEKSERMGRLWLLAIPLPFLGNSFGWLLTEMGRQPWIVNPGKNGIMLMTNQ 427 Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 ++S++ G ++ SM + LY+ V + L+ ++A G + K Sbjct: 428 GLSNSVSGGTVLTSMAVFTLLYSALGVVWIALLRRYALEGIDTRKKA 474 >UniRef50_Q6MAP5 Putative cytochrome bd-I oxidase subunit I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAP5_PARUW Length = 465 Score = 349 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 138/401 (34%), Positives = 218/401 (54%), Gaps = 9/401 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ L+R+QFALT M+H+++ L++G+ ++ I+E +Y+ + IY M +FW K+F + Sbjct: 1 MDVLILARIQFALTIMFHYIYPVLSIGLGLIMVIVEGLYIKTKNPIYLRMAQFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+GVATG+ MEF+FGTNW+ YS YVGD+FG+ LA EG+ AFFLES F+ + FGW+R+ Sbjct: 61 TFAIGVATGIVMEFEFGTNWATYSRYVGDVFGSALAAEGVFAFFLESGFLAVVIFGWNRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 H T +V LG++ SA+WI++AN WMQ P E M R E+ F E+V NP Sbjct: 121 SPKFHFFATTMVCLGAHFSAIWIVIANSWMQTPAGFKIAGEGMNARAEITEFWEMVFNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + ++ H + ++ GA ++ ISA+Y+LK + FA++S I + GD Sbjct: 181 SMIRLGHVILGCWLAGAFLVISISAYYLLKKKHQIFARKSIIIGLWVAFITSILQAYSGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 SG + Q TKLAA+EA ++T+ TLFG+ + EE+ +AIQIP L ++ Sbjct: 241 SSGKVVAKYQPTKLAAMEALYQTESGV-PLTLFGVVNTEEKKIDYAIQIPKLLSFLSFGD 299 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGL 355 + + GL ++ + + Y L+ + + ++ + KK L G Sbjct: 300 FNAEMKGLDQVNPEDWPNVPVIFNVYRLMIAMWALMFSLSIAGLYLWYKKTLENHRGILW 359 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC 396 L+ A +A A P +Y RI Sbjct: 360 LMVFSAIYAQVANQAGWYSAETGRYP--WLVYGLLRISEGL 398 >UniRef50_Q8DII4 Cytochrome oxidase d subunit I n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DII4_THEEB Length = 481 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 160/505 (31%), Positives = 232/505 (45%), Gaps = 65/505 (12%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V LSR QFALTA++H L+ LT GM+ L ++E +++ + Y +FW KL+ + Sbjct: 6 LDTVVLSRWQFALTAIFHMLWPVLTTGMSIYLVVIEGLWLKTKNLTYYHHARFWSKLYIL 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GVA+GL M FQFG NW+ +S VGD FG L E MAF LE++F+G+ FGW R+ Sbjct: 66 NFGIGVASGLPMAFQFGLNWAPFSESVGDFFGTLLGFEATMAFMLEASFLGIMIFGWQRV 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 V H T VA G+NLS WIL AN W+Q P F + + + + + NP Sbjct: 126 PPVMHWISTICVAFGANLSTFWILSANSWLQTPTGGVFVE--GKFRVQDYFQAIANPFMV 183 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 F H + T I GISAWY+L+ R F +S + + + +G S Sbjct: 184 KSFAHMFFATLETSLFVIGGISAWYLLQNRLPNFFTKSLKVVLVMALVIAPLQVFVGHLS 243 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAA--FTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 ++ Q KLAA+EA WET PA +++ +P++ ETN F ++IP L + Sbjct: 244 AEQVYHYQPAKLAAMEALWETVPAGTPADWSVIALPNEAAETNTFEVKIPALLSYLLALR 303 Query: 300 V--DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 DTP++GLKE + V + S + + GL L Sbjct: 304 PKLDTPILGLKEWAPSDRPHL---------------------VGLIYYSFRLMVAIGLYL 342 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 + +R+ Sbjct: 343 AALAIVTIFVWWR--------------------------------------TGLEGDRLR 364 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +WL ++ PL ++AVEAGW V GRQPW + L TA A S L ++FS+ Sbjct: 365 NYQWLWWGWIFAGPLGYLAVEAGWIVRCVGRQPWIVYGQLRTAEAASDLPPQVVLFSLSG 424 Query: 478 ICGLYTLFLVAELFLMFKFARLGPS 502 + LYT+F A LF + + GP+ Sbjct: 425 LVALYTIFFFAALFFGSRIIQKGPN 449 >UniRef50_A1AN70 Cytochrome bd ubiquinol oxidase, subunit I n=13 Tax=Bacteria RepID=A1AN70_PELPD Length = 448 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 236/420 (56%), Gaps = 10/420 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA+T M+HF+FVPLTLG++ ++A MET Y ++G + + MT+FWGKLF I Sbjct: 1 MDTLLLSRLQFAVTCMFHFIFVPLTLGLSIMVAWMETRYCMTGDETWLRMTRFWGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFALGV TG+TMEFQFG NW+ YS YVGDIFGAPLAIE +AFFLES F+GL+ FGWD++ Sbjct: 61 NFALGVVTGITMEFQFGMNWAEYSRYVGDIFGAPLAIEATVAFFLESVFIGLWIFGWDKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ WLVA+ +NLS L IL+AN WMQNP+ + R EM F ++ NP Sbjct: 121 SQKVHLLSIWLVAIATNLSGLVILLANAWMQNPVG--YVLRNNRAEMTDFIAVLTNPYGL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +KF H + + Y A F++GISAW++L+ + F KRSF AA FG+A L ++GD S Sbjct: 179 IKFGHQITAAYTLAAFFVMGISAWHLLRNNELDFFKRSFRQAALFGLAGCLLAAMVGDLS 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKF-AIQIPYALGIIATRSV 300 E+ VQ K AA+E+ WET+ A L +PD++ E N A IP + ++A R Sbjct: 239 SVEVAKVQPAKFAAMESVWETKKG-ADLNLLQVPDEKNERNSLEAFSIPNMISLLAFRDA 297 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLG----YGLL 356 + V GLK + + ++ ++ L ++ S K + L Sbjct: 298 NAEVTGLKSFPRELRPPVLPVFLSFRVMVGLGVYFILASLIAVIISFKGHPERHRLFLTL 357 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRV--APLYFAFRIMVACGFLLLAIIALSFWSVIRN 414 L P A + A P + L A + + +AI F + Sbjct: 358 LVFSLPLPYIANQLGWLVAEMGRQPWIVYGVLKTADAVSTSVSATQVAISLAGFTLLYGG 417 >UniRef50_D2SBT9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D2SBT9_9ACTO Length = 521 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 155/546 (28%), Positives = 253/546 (46%), Gaps = 71/546 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+V+++R QF +T +YHFL VPLT+G+ L+A+M T++V +GK + MT+FWG+++ I Sbjct: 6 IDVVDIARWQFGITTVYHFLMVPLTIGLGVLVAVMHTLWVRTGKPEWLRMTRFWGRIYLI 65 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF LGVATGL EFQFG WS YS +VGD+FG+ LA+E L+AFFLESTF+GL+ FGW R+ Sbjct: 66 NFVLGVATGLVQEFQFGLAWSEYSRFVGDVFGSLLALEALLAFFLESTFLGLWIFGWGRI 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GS +SA +I+ AN WMQ+P+ + + T R V F ++ N A Sbjct: 126 PKELHLAALWAAVIGSIVSAYFIIAANSWMQHPVGVEVDDTTGRPVQVDFLAVLTNNTAL 185 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR---------DFAFAKRSFAIAASFGMAAVL 232 F H V + + ++GI W++ + D A +RS + +AA + Sbjct: 186 AAFSHAVVAALMVAGALLVGIGLWHLRRRALAGQPTTDVDHAVWRRSVRLGGWVSLAAFV 245 Query: 233 SVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGI--PDQEEETNKFAIQIPY 290 V + GD G M + Q K+++ EA ET+ APA F++ E + +I IP Sbjct: 246 LVALTGDWQGKLMYEQQPLKMSSAEALCETE-APAPFSVLAWSKLGSNECDDVHSITIPG 304 Query: 291 ALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG---STDQAVRDQFNSM 347 + +A + V G+ +L ++ +G + + S Sbjct: 305 LVSFLAHGDFSSAVPGVNQLQEEYAAVYGETYPDDPSRFGALAGEEIDYTPLLAVSYWSF 364 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 + +G G + + A + Sbjct: 365 RLMIG-------------------------------------------MGAVSAGVAAYA 381 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE-----------V 456 W+ + R+ + + +L + P++A GW E GRQP+ + Sbjct: 382 LWATRKGRVPTSQIGVYGSLLAVAAPFVANATGWVFTEMGRQPFVVHPNPDVPVGEQTYF 441 Query: 457 LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 + +TA ++ S+ L+ +Y V EL+L+ +F R G ++ + Sbjct: 442 FTAQAVSPGVTAAEVWTSLTLLTLVYGALAVVELWLITRFVRRGVTTGDHAP--DHPAPA 499 Query: 517 TTQPAR 522 PA Sbjct: 500 PGTPAE 505 >UniRef50_A0LSG3 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSG3_ACIC1 Length = 459 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 161/500 (32%), Positives = 245/500 (49%), Gaps = 64/500 (12%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R QFA+ ++HF FVP+T+G+ L+A++ T+ ++ +T+F+ +F I+ Sbjct: 2 ALFLARWQFAIVTIFHFFFVPVTIGLGVLVAVLATLAHRHRGSDWERLTRFFSHIFLISM 61 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ +EFQFG NWS YS +VG+IFGAPLAIEGL+AFFLESTF+GL+ FG DRL Sbjct: 62 AVGVVTGIVLEFQFGLNWSRYSVFVGNIFGAPLAIEGLLAFFLESTFIGLWVFGRDRLPP 121 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ WLV++G+ LSA +IL AN WMQ+P+ E + + +F ++ N Sbjct: 122 RVHLATIWLVSIGTLLSAFFILAANAWMQHPVGYRV--ENGKAVLTNFWAVLGNSTLWWS 179 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFA----IAASFGMAAVLSVIVLGD 239 F HTV + TG +LGI+ + + D ++ +F +AA AA + V GD Sbjct: 180 FAHTVFAALATGGALMLGIAVYRSRRDSDDPPSRLAFRKAAMLAAGVTAAAGILTAVSGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 M Q K+AA EA ++T A+F+L I D F I++P L +IAT + Sbjct: 240 GQARLMDTQQPMKMAAAEALYDT-TRGASFSLLTIGDL-SGNPIFQIRVPGLLSLIATLN 297 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V+G+ ++ + R SGS + + S + Sbjct: 298 PEGEVLGIHQIQQAEQARY-------------GSGSYVPVIWLTYWSFRIM--------- 335 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 V G LL+ + W + R E Sbjct: 336 ----------------------------------VGAGILLVLLPLWILWRMRRRTGFEG 361 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 +WL R AL GI LP +A AGW E GRQPW + ++ TA S++ D+ ++ Sbjct: 362 RWLQRIALAGIALPLVANTAGWIFTEAGRQPWIVYGLMTTASGVSTVPVADVAATLGSFV 421 Query: 480 GLYTLFLVAELFLMFKFARL 499 +YT+ L+ + AR Sbjct: 422 AVYTILGFIAAVLIARAARR 441 >UniRef50_Q28UF9 Cytochrome bd ubiquinol oxidase subunit I n=54 Tax=Proteobacteria RepID=Q28UF9_JANSC Length = 478 Score = 342 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 141/498 (28%), Positives = 215/498 (43%), Gaps = 50/498 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H LF +T+ + ++L + + + +M +FW K+F + Sbjct: 4 LDTLILSRIQFAANISFHILFPTITIALGWVLFFFRVRFAQTQDDKWMNMYRFWVKIFAL 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV +G+TM FQFGTNW + VG+I G LA E L AFFLE+ F+G+ FG+ R+ Sbjct: 64 SFAMGVVSGITMSFQFGTNWPGFMETVGNIAGPLLAYEVLTAFFLEAVFIGIMLFGFSRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 HM T LVA G+ +SA WI+V N WM P F + ++ NP Sbjct: 124 PGWLHMLATGLVAFGTTVSAFWIIVLNSWMHTPQG--FEMIDGVAFATDWWAIIFNPSMP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F H + +T A I G+SA+ L G + + + S G + I LGD Sbjct: 182 YRFAHMWIASGLTVAFLIAGVSAFRWLLGDRSRDVRTALKVGVSIGALLIPVQIFLGDLH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q K+AA+E WET LF IPD+ N I IP +I T S D Sbjct: 242 GLNTKEYQPAKVAAMEGLWETGT-NVPLILFAIPDEAARENHAEIGIPGLASLILTHSWD 300 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + GL + + + + V F S + +G G+ + Sbjct: 301 GELQGLNDFVAEDGTVL------------------HPPVAPIFYSFRVMVGTGMAM---- 338 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + P ++ G K Sbjct: 339 -LALSWFGVFMMWKRRRMHPNPGACHWL------------------------AVEGLPKI 373 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 L A + W+A AGW+ E GRQPW + V+ T +A + + A + ++V + Sbjct: 374 YLWALVPMAFSGWVATLAGWYTTEIGRQPWLVQGVMTTEMAVADVPAPMVAGTLVGYLVV 433 Query: 482 YTLFLVAELFLMFKFARL 499 Y L L A + ++ AR Sbjct: 434 YGLLLFAYISVIVYLARK 451 >UniRef50_C7M392 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Actinobacteria (class) RepID=C7M392_ACIFD Length = 463 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 157/513 (30%), Positives = 245/513 (47%), Gaps = 59/513 (11%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V LSR QFA T +YHFLFVP+T+G+ ++AI++T SG Y+ + F+GKLF INF Sbjct: 6 TVLLSRWQFAATTIYHFLFVPVTIGLGLIVAILQTAAYRSGDDRYERVLDFFGKLFLINF 65 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ EFQFG NWS YS YVG+IFG PLAIEGL+AFF+ESTF+G++ FG DR+ + Sbjct: 66 AIGVVTGIVQEFQFGMNWSAYSAYVGNIFGPPLAIEGLLAFFMESTFLGVWLFGKDRVPR 125 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H+ WLV++G+ LSA +IL AN WMQ+P+ + T + M +F ++ N + V Sbjct: 126 RVHLASIWLVSIGTMLSAAFILAANSWMQHPVGYRIDPATHQAVMTNFWAILTNELFLVT 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDF-AFAKRSFAIAASFGMAAVLSVIVLGDESG 242 HT+ + ++TG+ +LGIS W + + ++ + + L + + G G Sbjct: 186 LFHTLLASFLTGSALVLGISLWQYHRSTETREVFAAGARVSLIVMLISALLMGLDGHIDG 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + + Q KLAA EA + T A+ ++ I + + F+I IP+ L ++AT + Sbjct: 246 QVIAETQPMKLAAGEALYNTSRG-ASESILTIGNL-HDKPIFSIGIPHVLSLLATDHWNG 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 V G+ +L +++ Q GS V + S + G G ++ Sbjct: 304 VVQGINQLQA-------------AMVRQYGPGSYIPPVALDYWSFRIMAGIGAVIILIAL 350 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 L + R+ + F +A+ W Sbjct: 351 WG-------------------GWLLYHHRLEQSRWFAKVAL-----------------WT 374 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 + WI E GRQPW + +L T+ S L+ + ++V LY Sbjct: 375 IPLPFIANTTGWI-------YTETGRQPWIVYGLLKTSQGASHLSPWSVGITLVGFTVLY 427 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 + V ++ LM ++ R E S Sbjct: 428 GILAVVDISLMVRYGRRSLEPGADTETEHEVGS 460 >UniRef50_D0L0A6 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Gammaproteobacteria RepID=D0L0A6_HALNC Length = 483 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 126/505 (24%), Positives = 198/505 (39%), Gaps = 66/505 (13%) Query: 6 ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFAL 65 +L+RL F H L+ PLT+G+A L E ++ + + +T+F+ KLF INF Sbjct: 9 DLARLDFGWITTMHILYPPLTIGLASFLLYSEWRWMKTDNDEWYRLTRFFEKLFIINFGA 68 Query: 66 GVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQ 125 GVATG+TME FG ++ +S G FG L E + AF E+ F+GL FGW ++ K Sbjct: 69 GVATGVTMEMSFGILFAPFSQAAGPFFGNILGYETITAFMYEAGFIGLMIFGWGKISKKM 128 Query: 126 HMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFV 185 H+ T+ VA S LSA+WILVAN WMQ+P + E + ++ + NP F Sbjct: 129 HLFATFNVAFSSMLSAMWILVANSWMQSPTG--VHLEKGLFLVDDWTAAIFNPNFLTAFP 186 Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 H + G F+ GISAW + K R R+ + + + +GDE G + Sbjct: 187 HMFIAAIEIGLFFVAGISAWMIYKNRHAQMFMRTLTASLMALVIVAPLQVYIGDELGRTV 246 Query: 246 GDVQKTKLAAIEAEWET----QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + LAA+E W T ++ L PD+E+ TN F I IP+ L ++ Sbjct: 247 AEHDPAALAAMEGHWHTYNADGTPNTSWNLVAWPDEEKGTNTFQIGIPHVLSLLEDHKWV 306 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + V GL + + + A+ ++ A + K L +R Sbjct: 307 STVKGLDQFKPEDRPPVLAPFYAFRIMVAAGGILMLVAFWALYLRYKGKFNALELQRRP- 365 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + R ++ L I Sbjct: 366 --------------------------WFLRAVIFSAILPYVAIW---------------- 383 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 GW+ E RQPW + ++ T+ S ++ I + Sbjct: 384 -----------------TGWWTREIARQPWIVHGMMRTSEGVSQMSISAEIAWFIGFVFF 426 Query: 482 YTLFLVAELFLMFKFARLGPSSLKT 506 + + + K R GP + Sbjct: 427 DLVVWIGAWYFFSKVVRRGPDMHEE 451 >UniRef50_D2B3T7 Cytochrome bd ubiquinol oxidase (Subunit I) n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3T7_STRRD Length = 478 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 160/538 (29%), Positives = 245/538 (45%), Gaps = 83/538 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+R QF +T +YHFLFVPLT+G+ +A ++T + +GK+ Y +TKF+GKLF I Sbjct: 1 MDALDLARWQFGVTTVYHFLFVPLTIGLGVFVAGLQTAWHRTGKEQYLRLTKFFGKLFLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GV TG+ EFQFG NWS YS +VGD+FGAPLA+E L+AFFLESTF+GL+ FGWD+L Sbjct: 61 NFAMGVVTGIVQEFQFGMNWSDYSIFVGDVFGAPLALEALLAFFLESTFLGLWIFGWDKL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K H+ W +GSNLSA +IL AN WM++P+ + + M ++ N A Sbjct: 121 PKRVHLATIWAAVIGSNLSAYFILAANAWMKHPVGYEVV--DGKARMTDLWAVLTNSSAL 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRD-------------FAFAKRSFAIAASFGM 228 + H V + +V F+L + +++L+ R + A Sbjct: 179 AQVPHVVGAAFVVAGGFVLAVCGYHVLRERRADPDRTTPMRRGATDMWRTPMRAALVMTA 238 Query: 229 AAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQI 288 A + V GD S + + Q KLAA E A A F+ +++ Sbjct: 239 IAGVVVAGSGDMSAKLLYEQQPMKLAAAEGLRH-DTAGAPFSPV-----------PGVEV 286 Query: 289 PYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMK 348 P L +AT V G ++L + E+ G + F S + Sbjct: 287 PMLLSFLATNDPSAVVHGTEDLQARFEKEFGPGDYR-------------PNLPVVFWSFR 333 Query: 349 KDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSF 408 + +G+ + T + + Sbjct: 334 VMITFGMATVALSVLGLWLTRKRRRDPRPPRELPT------------------------- 368 Query: 409 WSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LT 467 WL RA + +PLP IA+ +GW ++E GRQPW + L TA + S ++ Sbjct: 369 ------------WLARACVLALPLPTIAMISGWLLSEIGRQPWTVQGELLTAASVSPGVS 416 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR-----YHFEQSSTTTQP 520 ++ S+ + LY + +AE L+ + + GP G E S+ QP Sbjct: 417 LTEVAISLAIFTALYGVLALAEAVLIVRHVKTGPEPAAPGPLTPPSRDDEDSAARLQP 474 >UniRef50_B2JUZ1 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Burkholderia RepID=B2JUZ1_BURP8 Length = 467 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 151/505 (29%), Positives = 225/505 (44%), Gaps = 64/505 (12%) Query: 1 MLDIV-ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF 59 MLD V LSR QFA+TA++H L+ LT+ ++ L ++E +++ +G +Y +FW KL Sbjct: 1 MLDHVANLSRAQFAMTAIFHILWPILTISLSAFLVLVEALWIKTGDVMYYRQARFWSKLL 60 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +NFA+GV +G+ MEFQFGTNW+ +S Y G G L EG MAF LE+ FVG+ GW Sbjct: 61 VLNFAVGVVSGIPMEFQFGTNWAGFSQYSGQFIGNILGFEGAMAFMLEAGFVGVMLLGWG 120 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 R+ + H+ T +VALGS++SA WI+VAN WMQ P ++E+ + + NP Sbjct: 121 RVPRGVHLFATSMVALGSSISAFWIMVANSWMQTPAGYAVV--NGKIEVTDYLVAIFNPD 178 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 H + TG I GISA+ + + R F RSF IA S + A I LGD Sbjct: 179 MVWGVSHMWVAAIETGMFVIAGISAYNLFRKRHPEFFARSFKIALSVLVVAAPLQIWLGD 238 Query: 240 ESGYEMGDVQKTKLAAIEAEWET--QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 SG + + Q K AAIE W T A+++L PDQ+ + N +++++P L ++ T Sbjct: 239 SSGVSVFETQPAKGAAIEGHWHTNASGTGASWSLLAWPDQKAQRNDWSLEVPGMLSVLGT 298 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 S+ V GL + + + + + + + G GL Sbjct: 299 HSLHGQVKGLTDFAREDQPPMIP---------------------LLYYAFRAMAGIGLCF 337 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 A A R L + I Sbjct: 338 MLLAFWTAYALRKARGSLDALLARRKLLLAWVLCI------------------------- 372 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 + WI E G RQPW + +L T+ A S++ + SM + Sbjct: 373 ------PLPYVAVEAGWIVREVG-------RQPWVVYGLLRTSQAASTVAPSAVSLSMAM 419 Query: 478 ICGLYTLFLVAELFLMFKFARLGPS 502 Y + LV L ++ R GP Sbjct: 420 FFAFYAVLLVTFFVLACRWLRKGPD 444 >UniRef50_A8H1K9 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Shewanella RepID=A8H1K9_SHEPA Length = 552 Score = 333 bits (855), Expect = 8e-90, Method: Composition-based stats. Identities = 169/506 (33%), Positives = 269/506 (53%), Gaps = 10/506 (1%) Query: 6 ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKL-FGINFA 64 + +RL+FAL+ M H +FVPL +G+ + AI ET+YV YK +F GKL I F Sbjct: 8 DSARLEFALSMMVHQIFVPLFIGLMLVTAIFETLYVTKSNAEYKSAAQFIGKLCLPIVFV 67 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM---AFFLESTFVGLFFFGWDRL 121 L + LT +W ++ +F + + G + L T V LF+ GW L Sbjct: 68 LIITGILTPPMP--EDWQQLDIFINSVFSEYVGLLGTIVSTGMMLWLTAVSLFYVGWRYL 125 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPI-ASDFNFETMRMEMVSFSELVLNPVA 180 H+ +TWL+ + L ++V NGWM +P A F+ TM + S E+V P+A Sbjct: 126 PAKVHLFITWLLPFICAYTELPVIVLNGWMHDPSSAMQFDINTMTYQASSLLEIVSTPMA 185 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H ++ G + ++ +S +Y+ K R AFA+ I AS G+ L I GD Sbjct: 186 STRFAHMFTGAFLIGGVTLISLSCYYLQKNRQQAFAQTGVVIGASIGLCFSLFAIFSGDI 245 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G ++ Q KLA +EA W+TQ A LF +PDQ+ E N+F ++IP LG + + + Sbjct: 246 HGRDVHQAQPMKLAQLEALWKTQQDGADLVLFALPDQQAEENRFEVKIPKVLGWMLSGTD 305 Query: 301 DT-PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 DT PV G+K+L ++ +RIRNG+ A+ + S S QA R+ + ++DLGY L+++ Sbjct: 306 DTQPVKGIKQLRAENMQRIRNGLLAHQAIAAYSSSSNKQAKRELIQAHQQDLGYAELVRK 365 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE- 418 Y P++ + TE QI+ A D++ V L+F+FR+MV G +L + + + I+ R+ Sbjct: 366 YNPDLIEVTEEQIRLAANDTVNNVCLLFFSFRVMVGAGIFILLLSSYWIYLAIKGRVNSV 425 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDL-IFSMVL 477 LL+ + Y +P+P+IA +GW ++EYGRQPW I V+PT S G F + Sbjct: 426 STRLLKLSTYALPIPFIAYLSGWLLSEYGRQPWVIYGVMPTLQGAGSFATGQTNGFQLPT 485 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSS 503 + Y + ++ ++ + GP Sbjct: 486 LLMSYAALFLILGVILARWIKQGPKP 511 >UniRef50_Q21LD9 Cytochrome bd ubiquinol oxidase, subunit I n=17 Tax=Bacteria RepID=Q21LD9_SACD2 Length = 479 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 140/503 (27%), Positives = 217/503 (43%), Gaps = 70/503 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + LSR+QFAL +H LF +T+ + ++L + + LS I+ +FW K+F ++ Sbjct: 25 DTLFLSRIQFALNISFHILFPTITIALCWILFYFKLRFNLSNNPIWMRAYRFWVKVFALS 84 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FALGV +G+TM FQFGTNW Y VG+I G L E L AFFLE+TF+G+ FG +R+ Sbjct: 85 FALGVVSGVTMSFQFGTNWPGYMATVGNIAGPLLGYEVLTAFFLEATFLGIMLFGVNRVS 144 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H T +VA+G+ LSA WIL N WM P F S+ +++ NP Sbjct: 145 NRLHTFATAVVAIGTTLSAFWILALNSWMHTPAG--FEMRDGVAHATSWWDIIFNPSFMH 202 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + H + + +T + + G+SA+ +LKG K + A I +GD G Sbjct: 203 RLTHVLIASGLTSSFLVAGLSAYRILKGDTKRAPKLALHTAIVLAGILAPLQIFVGDLHG 262 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + Q K++AIE W T+ A LF +P+++ + N +A+ IP +I T Sbjct: 263 LNSFENQPAKISAIEGVWHTEQG-APLLLFALPNEQTQRNDWAVGIPKLASLILTHDAQG 321 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GL H V F S + + G+L+ Sbjct: 322 EIKGLDTFDGNHPP-----------------------VAPVFWSFRIMVATGMLM----- 353 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 +A A A K PR+ + MV F ++ Sbjct: 354 -LASAWLGCFYLARKKPFPRLYL-----KAMVGLTFSGWVATLAGWY------------- 394 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 V E GRQPW + +L T A ++L AG++ FS+ + Y Sbjct: 395 --------------------VTEIGRQPWLVTGILKTQDAVTNLPAGNVQFSLTVYAVTY 434 Query: 483 TLFLVAELFLMFKFARLGPSSLK 505 + L+A + + A + + Sbjct: 435 AVLLLAYIHTLKVMANKAVNVEE 457 >UniRef50_B3QXC0 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacteria RepID=B3QXC0_CHLT3 Length = 466 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 142/387 (36%), Positives = 209/387 (54%), Gaps = 8/387 (2%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + LSR+QFA+TA +HFL+ PLT+G+A ++ ME YV SG + Y+ MTKFW KLF Sbjct: 4 DALMLSRIQFAVTAGFHFLYPPLTIGLALIMVSMEAFYVYSGDKFYEKMTKFWVKLFAAT 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F++GVATG+ +EF+FGTNW+ YS +VGDIFG+PLA EG+ AFFLES F+ + FGWDR+ Sbjct: 64 FSVGVATGIVLEFEFGTNWATYSRFVGDIFGSPLAAEGIFAFFLESGFLAVLLFGWDRVS 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFET--MRMEMVSFSELVLNPVA 180 H+ + +V GS +SA WI+VAN WMQ P A E MR E+V F +V NP Sbjct: 124 PKMHLFASSMVLFGSIMSAFWIIVANSWMQTPAAYHIVGEGSAMRAEIVDFWAMVFNPST 183 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +F H + ++ G ++ I+A+Y+LK R FAK+SF +A + + +V+G Sbjct: 184 VSRFAHVILGSFLEGGFVVMSITAYYILKNRHLEFAKQSFRVAIVVSAVSAILQLVVGHR 243 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 S + + Q +KLAA+E ++T+ A LFG P +E E I IP L + + Sbjct: 244 SAEVVAEYQPSKLAALEGLFKTE-DGAPLYLFGHPSEETEETI-GIAIPGMLSFLVHQDF 301 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 V GL + + + +AY ++ L + F + L + + Sbjct: 302 SATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFMLQV 361 Query: 361 TPNVAD----ATEAQIQQATKDSIPRV 383 A + A P + Sbjct: 362 FIFSVFGPYIANQTGWLSAEIGRQPWI 388 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 2/219 (0%) Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK-DLGYGLLLKRYTP 362 V+G + V E + L + + + + +L Sbjct: 239 VVGHRSAEVVAEYQPSKLAALEGLFKTEDGAPLYLFGHPSEETEETIGIAIPGMLSFLVH 298 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 AT + + K+ P V + A+ IMVA G + I + + R + E K++ Sbjct: 299 QDFSATVTGLDKFAKEDRPPVWITFQAYHIMVALGMYFIFITLFGLFLLWRGTLFENKFM 358 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANS-SLTAGDLIFSMVLICGL 481 L+ ++ + P+IA + GW AE GRQPW + +L TA A S S++ +++ S+ L L Sbjct: 359 LQVFIFSVFGPYIANQTGWLSAEIGRQPWIVYNMLRTADAISKSVSGAEVLTSLFLFTLL 418 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 Y L L +F+M + + GP + + P Sbjct: 419 YFLLLFVWVFIMDRKIKAGPEDVDGDIPILDAGGAEVLP 457 >UniRef50_C6NYS6 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Gammaproteobacteria RepID=C6NYS6_9GAMM Length = 488 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 125/520 (24%), Positives = 202/520 (38%), Gaps = 66/520 (12%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 V LSRL FA H L+ P+T+GM++LL +E ++ +G + + + +F+ K+F INF Sbjct: 8 PVLLSRLDFAWITSMHILWTPMTIGMSWLLFALEIAWLKTGDERWYKLNRFFEKIFIINF 67 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 GVATG+TME FG + +S VG FG L E + AF E+ F+GL FGW ++ K Sbjct: 68 GAGVATGVTMEMAFGILYGPFSQAVGPFFGNILGFETITAFMYEAGFIGLMVFGWGKVSK 127 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T+ V L S LSA+WILVAN WMQ+P + ++ ++ +LN Sbjct: 128 GMHAFATFNVGLSSTLSAMWILVANSWMQSPNG--VVLKNGLFQVTNWWNAILNENFTWG 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F H + +S+W++LK R+ + + I +GD G Sbjct: 186 FPHMWVATVELALFVFAAVSSWFILKNRNADLFTKLLKPTLLALLIVAPIQIFIGDTLGR 245 Query: 244 EMGDVQKTKLAAIEAEWET----QPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 ++ Q T LAA+E + T + L P+ + + N FAI IP+ L ++ T + Sbjct: 246 DVAMTQPTSLAAMEGHYHTYLPNGKVNTGWHLIAFPNAKNDGNSFAITIPHVLSLLETHT 305 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V G+ + + A+ + + A+ + ++ L K Sbjct: 306 WNGKVTGMDSFPAKDRPDVWVPFYAFRAMVAIGFFLFFVALWGNWLRLRGQFNAQALRKH 365 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 + R +V GFL Sbjct: 366 P---------------------------WFLRSVVFSGFLPYL----------------- 381 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 A+ GW+ E GRQPW + ++ T S ++ G IF Sbjct: 382 ----------------AIWCGWWTREIGRQPWVVYNLMRTYQGVSHMSVGQEIFWFAGYI 425 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 + + + G + F Sbjct: 426 VFELVVWSGAWYFFSRVIAKGVDDIAPSDTLFHHPDAGEA 465 >UniRef50_UPI0001C321DF cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321DF Length = 471 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 153/516 (29%), Positives = 239/516 (46%), Gaps = 60/516 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ +EL+RLQF T + HF + +++G+ F +A M+T + +G + + +T+F+GKL + Sbjct: 1 MNSLELARLQFGFTTLVHFAVIGVSIGLVFWVAAMQTRWHRTGDEKWLRLTRFYGKLMLL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +FA+GV TG+ FQFG NWS +S YVGD+FGAPLA+EGL AFF+E+ F+GL+ FGW RL Sbjct: 61 SFAVGVLTGIMQTFQFGMNWSRFSAYVGDVFGAPLALEGLGAFFVEAVFLGLWMFGWGRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VA + +SA ILVAN WMQ+P+ + + ++ N Sbjct: 121 PRRLHLACVWIVAGATVVSAYAILVANSWMQHPVGYE--LVDGSARLTDIVPVLFNLTVG 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + H V+ + G + +L I+A+++L+GRD A +A G+ A LS G Sbjct: 179 LTVAHVVSGALLAGTVVVLAIAAFHLLRGRDSAAFGAVARVAVFVGLFAALSTATFGHFQ 238 Query: 242 GYEMGDVQKTKLAAIEAEWETQPA-PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 G Q K+AA EA +ET+ + G +++P AL +I S Sbjct: 239 GMLAMKQQPMKMAAAEALYETEKPAGLSLFALGGLSTNPGELIVDLKVPAALSLINQLST 298 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 + V G+ +L + E+R G V + S + +G Sbjct: 299 QSTVRGINDLQTEAEQRYGPG-------------DYVPVVGLMYWSFRTMVG-------- 337 Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420 G L+AI+AL W +R+R+ + Sbjct: 338 -----------------------------------GGTALIAIMALGCWLAVRDRLAGSR 362 Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLIC 479 L+ AL LP++A GW + E GRQPW I +L T VANS + A + S+ Sbjct: 363 RFLQLALAATALPFLAQAGGWLLREGGRQPWVIDGLLRTDVANSPNVGAWTVGLSLAGFA 422 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 Y + R G + GR + Sbjct: 423 VFYGAVFFFAGRVAAHEVREGLEAPADGRASDSPPA 458 >UniRef50_Q1H2D2 Cytochrome bd ubiquinol oxidase, subunit I n=9 Tax=root RepID=Q1H2D2_METFK Length = 476 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 6/386 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + ++L+R+QFA T +H +F +T+G+A L ++E +++ +G+++YKD+ +W K+FG+ Sbjct: 4 ISALDLARIQFAFTVSFHIIFPAITIGLASYLFVLEALWLKTGREVYKDLYHYWLKIFGV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NF +GV +GL M +QFGTNWS +S + G + G L E L AFFLE+ F+G+ FGW R+ Sbjct: 64 NFGMGVVSGLVMAYQFGTNWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMMFGWSRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G H+ T +VALG+ +SA WIL +N WMQ P + + V + ++ NP Sbjct: 124 GPGLHLFSTAMVALGTLISATWILASNSWMQTPQGFEI--LDGVVVPVDWWAIIFNPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + VH + ++ A+ + AW++LKG+ + ++A + V+GD Sbjct: 182 YRLVHMGIAAFLATALIVGAAGAWHILKGQKTEATRTMLSMAMWMLVVVAPLQAVVGDLH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q KLAA+E WE LFG+PD E ET +FA+ IP+ +I T S D Sbjct: 242 GLNTLKHQPAKLAAMEGHWEHHEGGVPLLLFGLPDMEAETTRFAVGIPHLGSLILTHSWD 301 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGLLL 357 V LK+ + ++ ++ L + + L G+ + Sbjct: 302 GQVPALKDFPPEDRPNASIIFWSFRVMVGLGMLMIALGLWSLCLRYRGSLYSHQGFLRMT 361 Query: 358 KRYTPNVADATEAQIQQATKDSIPRV 383 P A A P V Sbjct: 362 LWMGPAGVIAILAGWFTTEIGRQPWV 387 >UniRef50_A7HAW3 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Bacteria RepID=A7HAW3_ANADF Length = 472 Score = 324 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 168/495 (33%), Positives = 241/495 (48%), Gaps = 70/495 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D++ LSR+QFALT M+H+LF PLT+G+A ++A++ Y+ + +Y FW LF Sbjct: 1 MDVLTLSRVQFALTIMFHYLFPPLTIGLAGVIAVLLWRYLRTKDPVYHSAAHFWTALFAA 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 NFA+GVATG+ MEFQFGTNWS YS +VGDIFG+ LA EG+ AFFLES F+ + FGWDR+ Sbjct: 61 NFAIGVATGVVMEFQFGTNWSRYSTFVGDIFGSALAAEGIFAFFLESGFLAVLVFGWDRV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 H LVA GS SA+WI+VAN W Q P E R E+ F + VLNP Sbjct: 121 SPRMHFIAATLVAAGSVFSAVWIVVANSWQQTPAGFRLAGEGAARRAEITGFWDAVLNPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + V+ +HT+ YV GA F+L ISA+Y+L+GR FAKRSF++A F L ++V GD Sbjct: 181 SVVRLLHTLNGAYVLGAFFVLSISAFYLLRGRHEEFAKRSFSVALPFAAVFSLLLLVTGD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 S + + Q KLAA+E +E PA LFG+P EE + IP L ++ R Sbjct: 241 MSARVVAEHQPAKLAAMEGHFE--DGPADLHLFGVPRPEEGRVALGVAIPGGLSLLVHRD 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 D P+ GL + + A+ L+ L + + + Sbjct: 299 PDAPIQGLASVPPDARPPVTVPFHAFHLMVALGTAFIAVTLVGLWLK------------- 345 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 K ++ R L + F V L A + I +G + Sbjct: 346 ----------------RKGTLFRTRWLLWIFVFAV------LGTYASNQLGWIVAEVGRQ 383 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLI 478 W + L T + + S+TAG ++ S++L Sbjct: 384 PWTVWNLL------------------------------RTEHSFSPSVTAGQVLQSVILF 413 Query: 479 CGLYTLFLVAELFLM 493 +Y L+ L++M Sbjct: 414 GLVYFGLLLVWLYVM 428 >UniRef50_Q0RT31 Cytochrome d (Bd-I) terminal oxidase subunit I n=4 Tax=Actinomycetales RepID=Q0RT31_FRAAA Length = 790 Score = 323 bits (829), Expect = 8e-87, Method: Composition-based stats. Identities = 114/518 (22%), Positives = 195/518 (37%), Gaps = 67/518 (12%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V+L+R Q A + +H F +G+ +LL E ++ +G ++ +TK W + F + Sbjct: 8 DAVDLARAQTAFSLAFHICFAVFGVGLPWLLIYTERRWLKTGDPVWLALTKKWSRAFAVL 67 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+G +G + F+FG W + G G +EG AFF E+ FVG++ +GW RL Sbjct: 68 FAVGAVSGTVLSFEFGLLWPAFMSKYGGALGLSFTMEG-FAFFTEAIFVGMYLYGWKRLS 126 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H W +A+ LS L+I+ N WM P + ++ ++P Sbjct: 127 PRAHWLTLWPIAISGTLSTLFIITVNAWMNVPRG--IVEQNGKLLEAKPYAPFISPGTPP 184 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + VH + + + + I A ML+GR + +R I + +A +++GD + Sbjct: 185 QLVHMLLAALMCAGGVVAAIYAVGMLRGRRDTYHQRGLKIGLAVVLACAPLQLIVGDWAA 244 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 G Q KLAA+E + T + A F L GI D + ++ ++IP L ++ S Sbjct: 245 RVAGANQPFKLAAMEGLYHTG-SHAPFALGGIYDNKTGEIRYGLEIPGGLSLLEGFSTGH 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + GL + +G G L + Sbjct: 304 VIKGLDGAPPDERP----------------------NGTLVHGAFTTMVGAGSALIGLSL 341 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 + ++ + +P R + Sbjct: 342 ITGFVVLRRRRRGERPLLP-----------------------------TSRPWLIAAACT 372 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 AA+ + W V E GRQPW +G+ + +T GD + M + Sbjct: 373 GPAAMLAMLTGW-------EVTEGGRQPWIVGDHMRV---VEGVTGGDAVAPMFAGTLVL 422 Query: 483 TLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 L L L L+ + G S + R Q + + P Sbjct: 423 YLGLAGALLLILRKMATGGPSGEQLRP--GQPAGPSAP 458 >UniRef50_C8WK00 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Coriobacteriaceae RepID=C8WK00_EGGLE Length = 489 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 161/514 (31%), Positives = 236/514 (45%), Gaps = 67/514 (13%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V L+RLQFA TA YHF+FVPLT+G+ +LAI ET Y S TKFW K+F Sbjct: 6 DPVLLARLQFACTAAYHFIFVPLTIGLGLILAINETRYYRSRDPKDAAATKFWVKIFTAT 65 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 F LG+ATG+TMEF FGTNW+ YS +VGDIFGAPLA E L+AFFLESTF+G+ FG R+ Sbjct: 66 FVLGLATGITMEFSFGTNWADYSRFVGDIFGAPLAAEALLAFFLESTFLGVLLFGRKRVS 125 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 +M WLV GS LSALWIL+AN WMQ P ++ + + + + F +NP Sbjct: 126 PKFYMVSAWLVWFGSALSALWILIANSWMQTPAGAELSADGSKAVITDFLTAAMNPSVWP 185 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 ++ HT+ + + GA + +SAWY++K R FA ++ + A G+ ++V S Sbjct: 186 RYSHTIVAVLIMGAFVAMAVSAWYLIKNRHKEFAMKTMKLGAVVGIVVSCVMLVTAHSSA 245 Query: 243 YEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDT 302 + + Q TKLA +E ++++ FG D+E + IP +AT + DT Sbjct: 246 VTVAEEQPTKLAMMEGMYDSEVP--PLYAFGWVDEENQKVITPFSIPGGTSFLATGTWDT 303 Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 GL +L E + A V F + + L+ Sbjct: 304 EYEGLNQLAASAEYGALDPETAP--------------VNFVFQTYHLMVAMYGLIMLTVI 349 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWL 422 T + + + + R+++ L I + Sbjct: 350 LALVFTLRGGK---------IQNMKWLQRLVLISPVFPLIAIQAGW-------------- 386 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGE---------VLPTAVANSSLTAGDLIF 473 F AE GRQPW + +L + S++A +L+ Sbjct: 387 -------------------FTAEVGRQPWVVYPSATSPEGVSLLTNEGVSQSVSAPELVI 427 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 +MVL +Y +VA M +F + GP + Sbjct: 428 TMVLFLVVYAFLMVAWARTMGRFIKEGPVAEHEP 461 >UniRef50_C8XGQ0 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGQ0_NAKMY Length = 471 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 152/523 (29%), Positives = 245/523 (46%), Gaps = 61/523 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D ++L+RLQFA T++YHF FVP+T+GMA L+A++ T + G K + +F+G L I Sbjct: 1 MDQLDLARLQFATTSVYHFFFVPITMGMAILVAVLHTRWFRRGTPELKRVLRFFGGLMLI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + ++GV TGL EFQFG NWS YS +VGD+FGAPLA+EGL AFFLESTF+GL+ FG++ L Sbjct: 61 SISVGVVTGLVQEFQFGLNWSAYSRFVGDVFGAPLAMEGLAAFFLESTFLGLWLFGFNVL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+VALG+ LSAL+I+ AN WMQNP N +T R ++ S ++ NPV Sbjct: 121 PRRVHLLTAWMVALGACLSALFIIAANSWMQNPRGYTINPDTGRAQLTSIGDVFTNPVFI 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF----AKRSFAIAASFGMAAVLSVIVL 237 ++H + + G +L +SAW + + + + + + + + Sbjct: 181 WGYLHVLLVALIFGGGMLLAVSAWQLRRRATTDGTVAEFTGTAKLGLTALLIGTVLQFHV 240 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + G Q K+AA EA W+T + L ++ I+IP+ L ++AT Sbjct: 241 GGQLGINETSYQPMKIAAAEANWQTCQPCSFSMLQIGGWTADDPPTKIIEIPHLLSLLAT 300 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + + V GL L Q++++ G ++ Q + SM+ L+ Sbjct: 301 GTWNGEVQGLTPLNEQYQQQYGPGEYVPNVFIQ-------------YWSMRVMAYLATLV 347 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 + ++ Sbjct: 348 ALFGVWGIWLWWR-------------------------------------------KKLA 364 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSL-TAGDLIFSMV 476 + L A + + P++ AGWF+ E GRQPW + ++ T S +AG ++ S+ Sbjct: 365 TARVFLWIASWIMITPFLMSTAGWFLTESGRQPWVVQGLMLTKDGLSGSGSAGQIVVSLS 424 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 ++ LYT V LM + AR + ++ T Sbjct: 425 IVVVLYTTIGVIAAILMLRHARQPLPAEPLTPDRPADAAEPTP 467 >UniRef50_A5FA90 Cytochrome bd ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A5FA90_FLAJ1 Length = 461 Score = 320 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 128/510 (25%), Positives = 220/510 (43%), Gaps = 67/510 (13%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M +++ R+QFA T +H+LF LT+G++ ++ + Y+ + + Y T FW K+F Sbjct: 14 MEEMLFYDRMQFAFTITFHYLFPQLTMGLSLIIVYFKWKYLKTNNEQYNHATHFWMKIFA 73 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFA+GV TG+ MEFQFGTNW+ +S G I G LA+EG+ +FFLES+F+GLF FG Sbjct: 74 LNFAMGVVTGIPMEFQFGTNWAKFSELTGGIIGQTLAMEGMFSFFLESSFLGLFLFGEKL 133 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 LG H L+ +GS S I+ + WMQNP+ + E + + +F L LNP Sbjct: 134 LGHKWHFVTGLLIMIGSWASGYLIIATHSWMQNPVGYEI-LENGKFVLNNFQALFLNPWL 192 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV-LGD 239 ++H A+ VT + + GI A+Y+L ++ +F K FG+ + + V V GD Sbjct: 193 WPSYLHNQAASLVTSSFVVAGIGAFYILSKKNVSFGKLFLKTGVIFGLISSVIVAVPTGD 252 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + Q AA+E + T+ + L G PD +++ I +P L + + Sbjct: 253 LLAKNVVKYQPVTFAAMEGIFHTEKKGSEIVLIGQPDVKDKKLDNKIAVPNILSFLTYGN 312 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + + GL + +G + + +G G + Sbjct: 313 WEQEIKGLDQFEEDLHPTNISG---------------------LYYAYHIMVGLGTVFIG 351 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 + Q + + + + ++ M + + + Sbjct: 352 L-------MVISLFQLIRGKLFQTKWILWSLMFM------MPFPYIANTTGWYTAEL--- 395 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLI 478 GRQPW + ++ TA S +++G+ +F+++ Sbjct: 396 ---------------------------GRQPWLVYNLMRTAAGASPTVSSGNTLFTLLGF 428 Query: 479 CGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 GLY L + L L+ K GP ++ Sbjct: 429 IGLYLLLGMLFLLLVGKIINKGPHNVDLSS 458 >UniRef50_UPI0000E0EEC5 putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EEC5 Length = 465 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 123/516 (23%), Positives = 216/516 (41%), Gaps = 69/516 (13%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD + LSR+QFA +H +F T+G+A +A ET++ + I++ ++KFW ++F + Sbjct: 3 LDPLTLSRIQFAFVVCFHAIFPVFTIGLASTIAGFETLHYKTNNPIWQKLSKFWIQVFAV 62 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV +G+ M FQFGTNWS +S+ + G L+ E + AFFLE+ F+G+ FG D++ Sbjct: 63 VFGIGVVSGIVMSFQFGTNWSNFSYATANFLGPVLSYEVVTAFFLEAAFLGVLLFGRDKV 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ +VA G+ +S+ WIL AN MQ P + + S+++ + P Sbjct: 123 PQGVHLFAAIMVATGTFISSFWILAANSLMQTPQGLE--LINGMYYVTSWADSLFTPSFG 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 +F H + ++T ++ + G+SAW++L+ R+ K++ +IA F + V+GD Sbjct: 181 YRFAHMALASFLTASLVVAGVSAWFILQKRELEANKKALSIALWFLLVLAPLQAVVGDFH 240 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q K+AA+E WET + LF IPD+E + N F + IP + T D Sbjct: 241 GLNTLKHQPMKVAAMEGNWET-SSQVPLLLFAIPDKESQKNHFEVAIPGLASYVLTHDWD 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL E+ ++ + + ++ ++ L V K Sbjct: 300 GVVPGLNEVPIEEQPPVFIVFWSFRIMVGLGLLMIAFGVWGLVLRRKGR----------- 348 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 +Y + F+ L+ + G W Sbjct: 349 ------------------------IYHNNIFLNGLRFMSLSPFIAVLAGWVVTETGRAPW 384 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICG 480 L I + A + LT G +F+++ Sbjct: 385 L------------------------------IYGQMTHAQGLTPSLTGGMALFTLIGYIV 414 Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 +Y+ A ++ + + + G E Sbjct: 415 VYSCVFSAGVYYLLQVFKGGLEKANAPHELEEVERP 450 >UniRef50_B2UM69 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM69_AKKM8 Length = 459 Score = 317 bits (812), Expect = 7e-85, Method: Composition-based stats. Identities = 134/389 (34%), Positives = 203/389 (52%), Gaps = 8/389 (2%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M D V LSRLQFA+T M+H++F P+T+G+ +L +E +++ + +Y KFW ++FG Sbjct: 1 MDDPVLLSRLQFAITIMFHYIFPPMTIGLGVVLVALEGLWLKTKNDLYHKQAKFWTRIFG 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I FALGVA+G+ MEFQFGTNW+ YS VGDIFG+PLA EG+ AFFLES F+ + FGWD+ Sbjct: 61 IIFALGVASGIVMEFQFGTNWADYSRCVGDIFGSPLAAEGIFAFFLESGFLAILLFGWDK 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMR--MEMVSFSELVLNP 178 +G H + +VALG++ SA+WI+VAN WMQ P + + SF ++V NP Sbjct: 121 VGPKMHFLSSCMVALGAHFSAIWIIVANSWMQTPAGYKLVEVNGKIQAHITSFYDVVFNP 180 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 + H +A ++ GA +L +SAWY+LK R +++SF +A G+ V + + G Sbjct: 181 STVDRLTHALAGCWLAGATLVLSVSAWYILKKRFTGGSEKSFKVALVIGLIGVAGMGITG 240 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 D S E+ Q K AA+E E+ AP L G + I IPY L ++ Sbjct: 241 DSSAREVSVHQPAKFAAMEGVMESG-APQDLHLIGWMNPSTHEVT-GISIPYLLTLLTHH 298 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYG 354 +DT + G+ ++ I ++ L+ + + + + L Sbjct: 299 DLDTSITGMNDIPQDERPPILPVFYSFHLMILIGCALAALFLAGLWGWKRGWLFQKRWLL 358 Query: 355 LLLKRYTPNVADATEAQIQQATKDSIPRV 383 A +A A P + Sbjct: 359 WCFVFSVLGPQIANQAGWAVAELGRQPWI 387 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 8/238 (3%) Query: 272 FGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQL 331 F ++ I + G+ T + + + A L + Sbjct: 214 FTGGSEKSFKVALVIGLIGVAGMGITGDSSAREVSVHQPAKFAAMEGVMESGAPQDLHLI 273 Query: 332 RSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFR 391 + + LL T + D + + +D P + P++++F Sbjct: 274 GWMNPST-------HEVTGISIPYLLTLLTHHDLDTSITGMNDIPQDERPPILPVFYSFH 326 Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 +M+ G L A+ W R + +K+WLL ++ + P IA +AGW VAE GRQPW Sbjct: 327 LMILIGCALAALFLAGLWGWKRGWLFQKRWLLWCFVFSVLGPQIANQAGWAVAELGRQPW 386 Query: 452 AIGEVLPTAVANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR 508 + +L T A S LTA + + S+ + +Y L L L+ + GP Sbjct: 387 IVYGILRTEHAVSPTLTAAEALSSLGMFFVIYALLLALFLYQITHKIHKGPDQEAGED 444 >UniRef50_B3QK50 Cytochrome bd ubiquinol oxidase subunit I n=2 Tax=Rhodopseudomonas palustris RepID=B3QK50_RHOPT Length = 465 Score = 317 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 119/443 (26%), Positives = 205/443 (46%), Gaps = 9/443 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA T YH L+ T+G+A+ + ++ +++ + +Y+ + +FW K+F + Sbjct: 1 MDQLLLSRLQFAFTIGYHILWPAFTIGIAWFIVMLSALWLRTHNPVYQHLVRFWTKVFAL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV TG+ + +Q G NWS Y+ D G +E L AFFLE+ F+G+ +G +R+ Sbjct: 61 AFGMGVVTGVVISYQLGLNWSGYARATADAIGPLFVMEVLTAFFLEAGFIGVMLYGQERV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 G+ H +VA+G+ LSA WI+ AN WMQ P A R F +V NP Sbjct: 121 GEKLHFVACLIVAIGTVLSAFWIISANSWMQTPTAFT-TTADGRFVATDFWGVVFNPSMP 179 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR--DFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + H + + ++TG + G++A+++ +GR D A+++F+I + + + +++GD Sbjct: 180 YRLAHMITASFITGGFVVTGVAAFWIWRGRPADQPAARKAFSICLALLAVLMPAQMLIGD 239 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + G Q KLAAIEA W+T L PD++ E N +A++IP +I T S Sbjct: 240 QHGLNTRKYQPMKLAAIEARWDTARRV-PINLIAWPDEKAERNDYALEIPLLGSLILTHS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGL 355 ++ V GLKE+ + A+ ++ A + + L Y + Sbjct: 299 LNGEVKGLKEVPPSERPPVLPVFLAFRVMVGCGMLLLLVAFTGLYLRWRGRLYTTRWYQI 358 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRV-APLYFAFRIMVACGFLLLAIIALSFWSVIRN 414 P AT A P V + + +A + + Sbjct: 359 ACMGCVPLGFIATLAGWVVTEVGRQPYVIYGHFRTAEAVSPIATGAVASSMAIAFVLYNC 418 Query: 415 RIGEKKWLLRAALYGIPLPWIAV 437 + W + P+ + Sbjct: 419 LLLGFFWYAGRLAWRGPMSGLPT 441 >UniRef50_C9XX17 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX17_CROTZ Length = 481 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 129/500 (25%), Positives = 197/500 (39%), Gaps = 68/500 (13%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R QFA T +H + LT+G+A L ++E +++ +QIY D+ K+W K+F +N Sbjct: 18 ALLLARSQFAFTIGFHIVLAALTIGLAQWLMLLEGLWLWRRQQIYLDLYKYWSKVFALNV 77 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A+GV TG+ MEFQFG NW S G + G + +E L+AFFLE+ F+G+ FG ++ Sbjct: 78 AVGVVTGVLMEFQFGANWGELSSRAGAVMGPLMYMEVLVAFFLEAGFMGVVLFGMGKVRP 137 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T +VA GS SA WIL AN WMQ P R + V + ++ NP + Sbjct: 138 WVHFLATCVVAAGSLFSAFWILSANSWMQTPAGFIIGP-DGRFQPVDWWAVIFNPSFPYR 196 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 +H + + A + + AW++LK A+R F+ +A V+GD G Sbjct: 197 LMHMSIAALLATACLVAAVGAWHLLKRPQQPGARRMFSWGLWLLLALAPLQAVVGDLHGE 256 Query: 244 EMGDVQKTKLAAIEAEWE--TQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 D Q KLAA+E W LF IPD E N + IP + ++ Sbjct: 257 NTRDHQPVKLAAMEGSWNPPPPGEGEPLRLFAIPDMEARRNHLEVAIPSVGSLYLRHNLT 316 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 + L + V F + + +G G L+ + Sbjct: 317 GTIHSLNQFPPDELP----------------------WVPGVFFAFRAMVGLGFLMIFFG 354 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + R MVA + + + Sbjct: 355 VAGLVVRLRGRLWEAR----------WLQRGMVAMAPAGVIAMLAGW------------- 391 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 V E GRQPW I L T + S + ++ S V I + Sbjct: 392 --------------------VVTETGRQPWTIYGQLLTRESASPIAPSLVLGSFVAIVVV 431 Query: 482 YTLFLVAELFLMFKFARLGP 501 Y L + M + P Sbjct: 432 YLLVFALGMGFMLRLLAKPP 451 >UniRef50_B0TWW6 Cytochrome bd-II terminal oxidase subunit I n=14 Tax=Gammaproteobacteria RepID=B0TWW6_FRAP2 Length = 458 Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats. Identities = 121/412 (29%), Positives = 201/412 (48%), Gaps = 8/412 (1%) Query: 6 ELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFAL 65 LSR+QFA T +H LF ++G++ L I E +++++ Y + KFW K+F + F + Sbjct: 6 ILSRIQFAFTVSFHILFPAFSIGLSTFLMIFEALWLITKNDKYLSIVKFWTKVFALTFGM 65 Query: 66 GVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQ 125 GV +G+ MEFQFG NW+ ++ VG + G+ E L AFF+E+ +G+ FGW R+ K Sbjct: 66 GVVSGIVMEFQFGANWAGFAEKVGPVLGSLFTYEVLTAFFIEAGALGIMIFGWGRINKYV 125 Query: 126 HMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFV 185 H + + G LSA WIL AN WMQ P N+ + E+ S+ ++ NP +++ Sbjct: 126 HFLANFTIFAGVTLSAFWILSANSWMQTPDG--VNYINGKFEVYSWYHVIFNPSVIPRYI 183 Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 H + + Y++ M ILG+SA+Y++K + +FAK + + + + +GD+ G E+ Sbjct: 184 HMLMAAYLSTLMVILGVSAYYIIKDKHHSFAKTCIKFSIVSILILSVGQLAVGDDVGREV 243 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVI 305 + Q K AAIE W+TQ A F +F P + +E N F+I+IP +I T +D +I Sbjct: 244 HEHQPLKTAAIEGVWDTQKG-APFVVFAYPSESQEKNLFSIEIPKLASLINTHELDGELI 302 Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGLLLKRYT 361 GLK + + + ++ ++ + + V +K L + L T Sbjct: 303 GLKSVPEKDRPVVAVVFYSFRIMVGIGTLMILMGVVGTILLARKKLQTSKWFLRLCTLTT 362 Query: 362 PNVADATEAQIQQATKDSIPR-VAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 P A A P V + + F + + V Sbjct: 363 PLGFVAIITGWFTAEFGRQPWTVYNILRTEYSVSDINFWQVFSSLAAIIIVY 414 >UniRef50_A6W8I9 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=A6W8I9_KINRD Length = 486 Score = 312 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 152/532 (28%), Positives = 240/532 (45%), Gaps = 78/532 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGK---------QIYKDMT 52 + I L+RLQFA+T +YH+LFVPL++ +A A+++T ++ + Y ++ Sbjct: 1 MSIESLTRLQFAVTTLYHYLFVPLSISLALFTALLQTAHLRVRARTAPGDRAAERYGRLS 60 Query: 53 KFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVG 112 GKL + FA+GV TGL EFQFG +WS ++ + GD+FG LA+EG++AFFLE+TF+G Sbjct: 61 LLTGKLLMVTFAVGVVTGLVQEFQFGLSWSAFARFYGDVFGPTLAVEGMLAFFLEATFLG 120 Query: 113 LFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFS 172 L++FG DRL + H+ W+VA+G+ +SA IL AN +MQNP+A + T R + SF Sbjct: 121 LWWFGRDRLPALVHLATIWIVAVGTAISAFVILAANSFMQNPVAYTIDETTGRARLGSFR 180 Query: 173 ELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG------RDFAFAKRSFAIAASF 226 +L+LN V F HT A + G ++ + W++L+G DFA + A Sbjct: 181 DLLLNEVNLAAFPHTYAGAVMAGGALVMAVGVWHLLRGGHAVGSEDFAAFRALSRFGAWA 240 Query: 227 GMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAI 286 +A V GD G + +VQ K+AA E +ET A F++F + FAI Sbjct: 241 TLAGGALVAASGDLLGKVITEVQPMKMAAAEGLYETTTG-APFSIFSYAPLGSDRPTFAI 299 Query: 287 QIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS 346 ++P L +A S V+GLK+L + + +G + F S Sbjct: 300 EVPGMLSFLAKGSFSAEVLGLKDLQDAYAAQF-------------GAGDYTPWIPVAFWS 346 Query: 347 MKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL 406 + +G G+L + + Sbjct: 347 FRLMIGVGMLA-------------------------------------------ALVALV 363 Query: 407 SFWSVIRNRIGE-----KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAV 461 W ++ + + + +L LP A GW E RQPW + + TA Sbjct: 364 HLWVTRKSAVLDPDPRLARGILWTLPVLPLLPLFANSFGWIFTETARQPWLVFGLFKTAD 423 Query: 462 ANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFE 512 S L+ ++ S+ +Y A L+ + R G L + E Sbjct: 424 GVSPGLSFAEVALSLAAFTLVYGALAWAWTLLVTRLVRRGLPELPVPQREDE 475 >UniRef50_C2FUE2 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUE2_9SPHI Length = 457 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 118/496 (23%), Positives = 214/496 (43%), Gaps = 70/496 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +R Q A++ +H +F + + M F + I +Y+ +G +IYK +TK W + I Sbjct: 14 MDDFIAARSQMAMSLGFHIIFACVGMVMPFFMCIAHYLYLKTGNEIYKGLTKAWSRGVAI 73 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA G +G + F+ G W + + G IFG P ++EG AFF+E+ +G F +GW+R Sbjct: 74 LFATGAVSGTMLSFELGLLWPGFMKHAGPIFGMPFSLEGT-AFFIEAIALGFFLYGWNRF 132 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H +V + S + ++ AN WM +P F++ + + + + N Sbjct: 133 NRWFHWATGLVVGISGIASGILVVAANAWMNSPAG--FDYVDGKYINIDPIQAMFNDAWF 190 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + + +V + G+ A ++K ++ +F +F I+A A L + GD S Sbjct: 191 SQALHMMLAAFVATGFAVAGVHALMIIKKKNVSFHTAAFRISALAACIAALLQPISGDIS 250 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++G Q KLAA+EA +ET+ A A+F + GIPD+E T K+ I++P L +A +D Sbjct: 251 AKDVGKRQPAKLAAMEAHFETE-ARASFLIGGIPDEENGTVKYGIKVPGLLSFLAYGDID 309 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 PV GL ++ + A+ ++ +G G+LL + Sbjct: 310 KPVTGLHDIPRDEWPPVAITHYAFQIM----------------------IGLGMLLVLLS 347 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 A + + FR+ V L + + Sbjct: 348 ILYFIALFKKKSWLKST---------WLFRLFVIAIPLGYIALEAGW------------- 385 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 V E GRQPW I ++ T A + + + +S + + Sbjct: 386 --------------------VVTEVGRQPWIIYGIMRTIDAVTPMPG--IAYSFYVFTAV 423 Query: 482 YTLFLVAELFLMFKFA 497 + VA ++L+++ Sbjct: 424 FVSLSVAVIYLLYRQI 439 >UniRef50_C4DN92 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DN92_9ACTO Length = 477 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 156/522 (29%), Positives = 233/522 (44%), Gaps = 55/522 (10%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 +D +EL+RLQFA T H+LFV LTLG+ L+AI+ T V + + KFWG+ Sbjct: 1 MDTLELARLQFATTTGIHWLFVMLTLGLVPLVAIVNTRAVFTRDADKREGLVRLAKFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 L+ IN+ALG+ TGL MEFQFG +WS S + G++FGAPLA+E ++AFF ESTF+G++ FG Sbjct: 61 LYVINYALGIVTGLVMEFQFGLSWSGLSEFAGNVFGAPLALETMIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL + WLV L + SA WILVANG+MQ+P+ + R + F+ + N Sbjct: 121 WDRLRLGTQAVLIWLVCLTAYASAFWILVANGFMQSPVGYEV--REGRAYLTDFAAQLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYML-KGRDFAFAKRSFAIAASFGMAAVLSVIV 236 P A V F H + + +TG +F+ G+SA+++L + R+ F + A+ V + Sbjct: 179 PNATVAFGHILTAALLTGGLFVAGVSAFHLLRRTREREFFRTGLRTGVIAAAASTFPVYM 238 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 LG + D Q KLA L G E + + P Sbjct: 239 LGAAQFAVLADSQPMKLA---------------LLAGEGTSELQKDMVERHGPG------ 277 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 V H + + L L + R + ++ L G L Sbjct: 278 -----DYVPPEWIETWLHTMANIGYLVSTLALCALLVLFRARFTRSRLLAIVMVLAVGGL 332 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 Y + T + + I + RI Sbjct: 333 FGLYLGSYLFDTPGPYNEI----------------------IMPACIALAAVVLGFGGRI 370 Query: 417 GEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMV 476 + L + IPLP++A GW E GRQPW + L + A S ++ G ++ S+V Sbjct: 371 RRWRGLGWLLVVAIPLPFVASVGGWLFREVGRQPWIVYGELKVSDAVSPVSFGHMLTSLV 430 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 + G+ V L+ +FAR GP++ + G E T Sbjct: 431 IFVGVLGALAVTNWTLIARFARRGPAASQLGVARDEVPVLET 472 >UniRef50_C6XT46 Cytochrome bd ubiquinol oxidase subunit I n=7 Tax=Bacteroidetes RepID=C6XT46_PEDHD Length = 442 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 191/428 (44%), Gaps = 23/428 (5%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D +RLQ A + +H +F + + M F +++ ++ + K +Y+D+TK W K I Sbjct: 1 MDDFLAARLQMAFSLGFHIVFACIGMVMPFFMSVAHFYWLKTKKVVYRDVTKAWSKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA G +G + F+ G W + + G IFG P ++EG AFF+E+ +G + +GW++L Sbjct: 61 FFATGAVSGTVLSFELGLLWPKFMEHAGPIFGMPFSLEGT-AFFIEAIALGFYLYGWNKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H +V + LS + ++ AN WM +P F++ + + + + N Sbjct: 120 NPWFHWATGVVVGVSGLLSGILVVAANAWMNSPAG--FDYINGQYLNIDPIKAMFNEAWF 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + +V+ + G+ A +LKG++ AF ++F IAA FG A + GD S Sbjct: 178 SQSLHMCVAAFVSTGFAVAGVHALMILKGKNVAFHSKAFKIAAVFGTVAACLQPLSGDIS 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 ++ Q KLAA+EA + T+ A + GIPD + +A++IP L +AT + Sbjct: 238 AKDVAKRQPEKLAAMEAHFHTEK-FAPLIIGGIPDTANKKVDYALKIPGLLSFMATGDFN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKD-----LGYGLL 356 V GL + + + + A+ ++ L A+ KK L Sbjct: 297 GEVKGLDAVPKEDQPPVAVTHYAFQVMVGLGMAMVGIAILYFIALWKKKQWLDSKWLLKL 356 Query: 357 LKRYTPNVADATEAQIQQATKDSIP--------------RVAPLYFAFRIMVACGFLLLA 402 TP A EA P + + ++F + A L Sbjct: 357 FVAATPLGFIALEAGWTVTEVGRQPWIIRGVMRTADAVTPMPGIVYSFYLFTAVYISLAI 416 Query: 403 IIALSFWS 410 I++L + Sbjct: 417 IVSLLLYR 424 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 3/148 (2%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFW- 409 L LL + + K+ P VA ++AF++MV G ++ I L F Sbjct: 281 LKIPGLLSFMATGDFNGEVKGLDAVPKEDQPPVAVTHYAFQVMVGLGMAMVGIAILYFIA 340 Query: 410 SVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAG 469 + + + KWLL+ + PL +IA+EAGW V E GRQPW I V+ TA A + + Sbjct: 341 LWKKKQWLDSKWLLKLFVAATPLGFIALEAGWTVTEVGRQPWIIRGVMRTADAVTPMPG- 399 Query: 470 DLIFSMVLICGLYTLFLVAELFLMFKFA 497 +++S L +Y + L+++ Sbjct: 400 -IVYSFYLFTAVYISLAIIVSLLLYRQI 426 >UniRef50_C9RTT3 Cytochrome bd ubiquinol oxidase subunit I n=8 Tax=Bacillales RepID=C9RTT3_GEOSY Length = 448 Score = 302 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 121/507 (23%), Positives = 215/507 (42%), Gaps = 73/507 (14%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V SR+ LT +H ++ + +G+ ++AI + V + Y + + W + F I Sbjct: 5 DPVWFSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRKNDMHYVLLARRWTRGFVIT 64 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 A+GV TG + Q W ++ G + PL +E AFF E+ F+G++ + WDR Sbjct: 65 VAVGVVTGTAIGLQLSLLWPHFMQLAGQVISLPLFME-TFAFFFEAIFLGIYLYTWDRFE 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + +H+ + VA+GS+ SA++I + N +M P F + + + + NP Sbjct: 124 NQKKHLLLLIPVAVGSSASAMFITMVNAFMNTPQG--FALKNGEIVNIDPIAAMFNPAMP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 K H +A+ Y+T A + I+AW++LKG + +++ + + ++ ++GD S Sbjct: 182 TKVAHVLATAYMTSAFVLASIAAWHLLKGNRHIYHRKALHLTMKAALIFSIASALVGDLS 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G + Q KLAA E +ET + A FG+ +E+ K+A++IPYAL ++A Sbjct: 242 GKFLAVYQPEKLAAAEWHFET-SSHAPLVFFGML-EEDGEVKYALKIPYALSVLAHNHPG 299 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL ++ + + G+ L Sbjct: 300 AIVTGLNDIPKDERPPLY-----------------------IHYLFDMMVAIGVFLMLVA 336 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + + TK + F ++ A G L + I Sbjct: 337 TAYWLGSVFRWKWTTKK---------WFFGLLAAGGPLSMIAI----------------- 370 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 EAGW++AE GRQPW + + TA A +S D++ +VL C L Sbjct: 371 ----------------EAGWYLAEVGRQPWILRGYMKTAEAATSSAHVDMM--LVLFCLL 412 Query: 482 YTLFLVAELFLMFKFARLGPSSLKTGR 508 Y + +A + ++ + R P + Sbjct: 413 YLVLGIASVIVLVRLFRRNPVERELAE 439 >UniRef50_Q46G85 Cytochrome d ubiquinol oxidase, subunit I n=2 Tax=Methanosarcina RepID=Q46G85_METBF Length = 438 Score = 298 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 135/388 (34%), Positives = 207/388 (53%), Gaps = 7/388 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M++++ LSRLQFA+TA +HFLFVPLTLG+A L+A+MET+Y + + ++ M FWG +F Sbjct: 1 MIELLLLSRLQFAITAAFHFLFVPLTLGLALLVAVMETMYYRNKDETWRKMADFWGNIFK 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 INFA+G+ +G+T+ FQ GTNW Y+ ++GD+FG PLA+E L AFFLE TF+G + F Sbjct: 61 INFAIGLVSGITLTFQLGTNWGAYAEFMGDVFGPPLAMEALFAFFLEGTFLGAWIFLGHN 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 + W+VALG+N+S+LWIL ANG+MQ+P+ + + ++ M F L+ N Sbjct: 121 -RQKLKAFSMWMVALGTNISSLWILTANGFMQHPVGYEMAADGSKVVMTDFLALITNGYV 179 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 +HT+ + Y+ + ++GI A++ LKG + K+SF IA +A + + VLG Sbjct: 180 WYMLIHTLLAAYLLTSFVVMGICAYHFLKGNNNEVFKKSFNIAVIIALATAVMLPVLGHG 239 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFA-IQIPYALGIIATRS 299 + +Q TK AA++A WET + L +PD +N + IP + T S Sbjct: 240 YAQYVTALQPTKGAAMDAIWET-RSSVPMYLIQVPDSSTGSNSVQLLGIPGLASFLYTGS 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGL 355 + GL +L + ++ L+ L S A+ + L Y Sbjct: 299 FSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLGLYLQKSGKLYTSKKYLK 358 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRV 383 LL P A A P + Sbjct: 359 LLMWSIPLPYLTITAGWIVAEVGRQPWM 386 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 76/150 (50%) Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 + LG L T + Q +D +P V ++++FR+M G L + + L Sbjct: 282 VQLLGIPGLASFLYTGSFSGTITGLNQLPQDELPPVEMIFWSFRLMTILGSLFIIVALLG 341 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 + ++ K L+ ++ IPLP++ + AGW VAE GRQPW + +L TA SS+ Sbjct: 342 LYLQKSGKLYTSKKYLKLLMWSIPLPYLTITAGWIVAEVGRQPWMVYGLLRTANGVSSVP 401 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFA 497 D++ S+ LI Y + L+ E++L+ K Sbjct: 402 TSDVLLSISLISAFYMVLLIFEIYLIKKTV 431 >UniRef50_A3ZTY1 Putative cytochrome d ubiquinol oxidase subunit I n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTY1_9PLAN Length = 457 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 99/414 (23%), Positives = 180/414 (43%), Gaps = 11/414 (2%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +RLQ A T +H +F + +G+ L+ + E + + +G +++ + K W K F + FA Sbjct: 22 LLPARLQMAFTLGFHIIFACIGMGLPILIVLAEWLSLRNGDPVWRTLAKRWSKGFAVLFA 81 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G +G + F+ G W + G + G P +EG AFF E FVG++ +GW+RL Sbjct: 82 VGAVSGTVLSFELGLLWPEFMGKFGPVVGLPFTLEG-FAFFTEGIFVGIYLYGWNRLAPF 140 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H +AL +SA +++ N +M P + ++ V +LNP + Sbjct: 141 HHWLCGLPIALAGTMSAWFVVTTNSFMNCPQGFQLDA-DGKLLDVQPWTAMLNPATGAQT 199 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H + + Y+ + AW +L+GR+ + +R+ + G L +G +G+ Sbjct: 200 THMIVAAYMVTGFLVASFYAWEILRGRNGLYQRRALTLGVLLGGFFALVQGPVGHWAGHV 259 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q KLAA+E +WET+ A + GIPD E +T +AI+IP L ++A + V Sbjct: 260 VAVTQPIKLAAMEGQWETETY-APLRIGGIPDPETKTTPYAIEIPGMLSVLAYDNPAAEV 318 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFN------SMKKDLGYGLLLK 358 GL A+ ++ + + + + + + + L L Sbjct: 319 QGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYLLKWGKSAWHERRWWLLTLL 378 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMV--ACGFLLLAIIALSFWS 410 P A EA P + + + V A G + + +S + Sbjct: 379 ASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVTQAPGVWFIFAVTMSIYL 432 Score = 94.8 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 4/151 (2%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 + +L + A + +D P ++ AF+IMV G LL+ I S + Sbjct: 300 IEIPGMLSVLAYDNPAAEVQGLNAFPEDLHPPTPIVHVAFQIMVGIGTLLIFIGLWSGYL 359 Query: 411 VIRNR--IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTA 468 + + E++W L L PL +A+EAGW V E GRQPW + L T A + A Sbjct: 360 LKWGKSAWHERRWWLLTLLASGPLTVLAMEAGWTVTEVGRQPWIVQGFLRTKDAVT--QA 417 Query: 469 GDLIFSMVLICGLYTLFLVAELFLMFKFARL 499 + F + +Y + V + ++ A+ Sbjct: 418 PGVWFIFAVTMSIYLVLTVGCISVLRILAKQ 448 >UniRef50_C4PLL5 Cytochrome d ubiquinol oxidase subunit I n=13 Tax=Chlamydiaceae RepID=C4PLL5_CHLTZ Length = 446 Score = 295 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 187/388 (48%), Gaps = 8/388 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 + L+R+QFAL +H+LFVP++LG++ ++ +ME +Y+ + K IYK +T FW K+F + Sbjct: 1 MSAEILARVQFALFIGFHYLFVPISLGLSMMIVLMEGLYLFTKKSIYKQLTWFWIKIFTL 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +GV TGL F FG NWS ++ Y G++FG L EG+ AFFLES F+G+ FG ++ Sbjct: 61 TFVVGVVTGLMQIFSFGANWSRFAEYTGNVFGMFLGSEGMFAFFLESGFLGVLLFGRYKV 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 K H +VALG+++SA WI+ AN WMQ P + +M SF VL+P Sbjct: 121 SKKMHFFSACMVALGAHMSAFWIVCANSWMQTPSGYEMVMRNGMLVPQMTSFWAAVLSPS 180 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 A +F H V +++G +L +SA Y+ K R FA + I+ + + D Sbjct: 181 ALQRFTHVVLGAWLSGIFLVLSVSAHYLRKERHKDFANQGLKISMFCAFLVLALQLWSAD 240 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRS 299 + + Q KLAA E ++TQ L GI D ++E I IP L ++ R+ Sbjct: 241 VTARGVAKHQPAKLAAFEGVFKTQ-GHTPIYLLGIVDMKKERVI-GIPIPSGLSLLVHRN 298 Query: 300 VDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK----DLGYGL 355 TPV GL + + + Y L+ L A+ KK G Sbjct: 299 AKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYKKKSWSCKKGILW 358 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRV 383 +L E P V Sbjct: 359 ILSFSVLCPELCNEIGWISTEVGRQPWV 386 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 1/154 (0%) Query: 353 YGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 L A + Q KD P VA ++ + +MV +++ + ++F Sbjct: 287 IPSGLSLLVHRNAKTPVTGLDQFPKDEWPNVAFVFQTYHLMVMLWGVMVLLALIAFAVYK 346 Query: 413 RNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDL 471 + KK +L + + P + E GW E GRQPW + +L T A S + AG + Sbjct: 347 KKSWSCKKGILWILSFSVLCPELCNEIGWISTEVGRQPWVVYGLLKTKDATSPIVNAGQI 406 Query: 472 IFSMVLICGLYTLFLVAELFLMFKFARLGPSSLK 505 S++L ++ L + L+ K GP Sbjct: 407 WQSLILFSIIFICLLSVFVSLLLKKIGEGPDEQD 440 >UniRef50_D1CB61 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB61_THET1 Length = 441 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 174/385 (45%), Gaps = 7/385 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R Q A + +H +F + +GM L+ I E +++ + ++ Y + + W K + Sbjct: 1 MDELLAARFQMAFSLAFHMIFAAMGIGMPVLMLIAEGLWLRTREKDYLHLARKWAKATAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G I G A+EG AFF+E+ F+GL+ +GWD+L Sbjct: 61 LFAIGAVSGTVLSFELGLLWPKFMEFAGGIIGVAFALEG-YAFFIEAIFLGLYLYGWDKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + VAL S + +L AN WMQ+P F + + + + NP Sbjct: 120 PPKIHWLCGFPVALSGLASGVLVLSANAWMQSPTG--FELVGGQPTNIDPVKALFNPAWG 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 V +H+ S Y+ A + + A+ +L+G+ + +R+ IA + + L + + GD S Sbjct: 178 VMALHSTLSTYIASAFAVSAVYAFAILRGKSEKYHQRALNIAMAVAAISALLMPLSGDAS 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q KLAA+E + ++ A ++ G PD E E ++A++IP L +A + Sbjct: 238 ARSVAIRQPAKLAAMEGLFHSERG-AGLSIGGWPDLEREQLRYAVEIPKLLSFLAFHDPN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVR---DQFNSMKKDLGYGLLLK 358 V GL + + A+ ++ L +V +F + L Sbjct: 297 ALVRGLDSVPRDQWPNVVVVRAAFQVMVGLGIFLVVVSVWYWASRFWRRLHTKWLYIALV 356 Query: 359 RYTPNVADATEAQIQQATKDSIPRV 383 A EA P + Sbjct: 357 LSGIAGYTALEAGWIVTEVGRQPWI 381 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 3/133 (2%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 + LL + +A + +D P V + AF++MV G L+ + + S Sbjct: 281 VEIPKLLSFLAFHDPNALVRGLDSVPRDQWPNVVVVRAAFQVMVGLGIFLVVVSVWYWAS 340 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGD 470 R+ KWL A + + A+EAGW V E GRQPW I ++ T+ A + Sbjct: 341 RFWRRLHT-KWLYIALVLSGIAGYTALEAGWIVTEVGRQPWIIYGIMRTSEAVT--PTEG 397 Query: 471 LIFSMVLICGLYT 483 + +++ + +Y Sbjct: 398 VFETLIAVVAIYA 410 >UniRef50_Q03D44 Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 n=16 Tax=Bacteria RepID=Q03D44_LACC3 Length = 829 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 137/507 (27%), Positives = 222/507 (43%), Gaps = 58/507 (11%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYV--LSGKQIYKDMTKFWGKLF 59 L + LSR+QFA+TA+ HFLFV T+GM I E +Y + Y +T F+ ++F Sbjct: 10 LAVTNLSRMQFAVTAITHFLFVTTTIGMLLTTMIFEFMYAYGRGDTEKYGRLTLFFSRIF 69 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 +F GV TGL MEFQFG NWS ++ +GD+ G PLAIE +++FF+EST +GL+ F W Sbjct: 70 FFSFGTGVVTGLIMEFQFGMNWSAFTRLMGDVAGVPLAIESMISFFVESTIIGLWRFTWG 129 Query: 120 RLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 +L K H + + S S +WI+ N +MQNP F E R + S L+ NP Sbjct: 130 KLPKRAHAWLGVGMLGASLFSIVWIIAINAFMQNPYG--FRLEGGRARLTSLITLLQNPQ 187 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 + +F+H + + +TG GI+AW +L RD + K + I + A GD Sbjct: 188 YRPEFLHVLFAILITGGFLTAGIAAWQILHKRDTSAFKIAVQIGLLIALPAAFLQPAQGD 247 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAP---AAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 + G +Q K AIE +ET+ +P A + + + +++ T K A+ IP Sbjct: 248 DQGAATAALQPMKFTAIEGRYETEGSPTTGAPWAMAALINEDTHTTK-AVSIPNMGTYFG 306 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 + + G+ + + + Sbjct: 307 KNTFTGTMPGMNAVAKMYHAKF-------------------------------------- 328 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR- 415 D T A+ P V L++ +MV G+ + + R + Sbjct: 329 ---------DKTVAKSYDGQMTYYPPVTLLFWTMHLMVYAGYFFTMFALFATIMLHRRQS 379 Query: 416 -IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIF 473 I + LR + + LP++ +GW VAE GR P+ + +L A S +T + Sbjct: 380 AIEDHPKTLRTLGWVLWLPYLTFTSGWIVAEVGRYPFVVYGLLTQYDAVSPSVTVTEAGT 439 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLG 500 S+ L + +++ + + G Sbjct: 440 SLALFLMADIFLVTTMIYISHRTVKRG 466 >UniRef50_C0SP90 Putative cytochrome d ubiquinol oxidase subunit 1-like protein ythA n=90 Tax=Bacillales RepID=YTHA_BACSU Length = 443 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 112/513 (21%), Positives = 190/513 (37%), Gaps = 75/513 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + L+R F T +H +F L +G+ ++ + E +Y + Y M K W K + Sbjct: 1 MDDLVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + TG Q W + +G + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIE-IYAFFVEALFMSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + V +G+ SA+ I + + P F ++ V NP Sbjct: 120 SPAMRIVAVFFVLVGAAASAVLITNVHAFEGTPAG--FKILNGKITDVDPWAAFFNPSFF 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFA----FAKRSFAIAASFGMAAVLSVIVL 237 + H V S ++TGA + ++A+ M++ R F +++ +A + G L + Sbjct: 178 ITAGHVVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALN 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G ES + + Q KLA E +ET + A + G D EE K+AI+IP+AL +A Sbjct: 238 GHESAQMLYEYQPEKLAGAEGLFET-RSHAPLAIGGFTDPNEEKVKWAIEIPWALSFLAA 296 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 DT V GL + +G G+LL Sbjct: 297 NRFDTVVKGLNAFPRDEWPPLFIHTL-----------------------FNAMVGVGMLL 333 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 Y+ + KD P + I + G L Sbjct: 334 ILYSIIG----VVWRKVLKKDRFPT-----WLLIIFMTAGPFSLI--------------- 369 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 +E GW A GRQPW I +L T+ + T G + + Sbjct: 370 ------------------GIEFGWIFACTGRQPWVIYHLLKTSDVVT--TTGSIGVLFLF 409 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTGRYH 510 +Y + A ++++ + R P Sbjct: 410 FTFVYAVLGAAVVYVLLYYFRKHPVDEDLNTAE 442 >UniRef50_C7NNR1 Cytochrome bd ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=C7NNR1_HALUD Length = 489 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 122/527 (23%), Positives = 197/527 (37%), Gaps = 77/527 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 L SR+QF T H LF L++G+A + + +G + Y + FW K+F + Sbjct: 25 LPAEFASRVQFGWTISVHILFAALSIGLAPFIIYFTWKDIRTGSERYARLRSFWLKVFAV 84 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 F +G TG+ M FQFGTN+ +S G++ G PLA E MAFFLE+ F+G+ FG +++ Sbjct: 85 GFVMGTVTGIPMSFQFGTNFPGFSALAGELIGGPLAFEAKMAFFLEAVFLGVLLFGREKV 144 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPV 179 + + L G+ LS WILV N WMQ P + ++ P Sbjct: 145 SDRTYFLSSVLTGFGAWLSGFWILVVNAWMQTPQGYEMITRNGMEVAKLTDPIAAFFTPR 204 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 +VH + + ++ A+ + G++A+ + K RD + IA + A V GD Sbjct: 205 MTWMYVHMINASVISVALLVAGVAAYIVWKKRDAKAWHTALKIAVLLLIVAAPLQAVHGD 264 Query: 240 ESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD------QEEETNKFAIQIPYALG 293 G + D Q K AA+EA +ET A LF IP E N FAI +P Sbjct: 265 AYGRHVEDTQPQKFAAMEAHYETGT--ADLHLFAIPTSPDAIMNPSEENLFAISLPRVGS 322 Query: 294 IIAT-RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLG 352 +A+ D V GL E + + ++ ++ L A + + L Sbjct: 323 FLASGGDFDAVVKGLDEY--EQNPPVPLVFWSFRIMVGLGFLFIGLAFWGGYLIYRDRLS 380 Query: 353 YGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 L R M+A L A + ++ Sbjct: 381 DSSL--------------------------------YLRAMIAASPLGYAALLTGWYVT- 407 Query: 413 RNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLI 472 IG + W+++ L +S+L++ + Sbjct: 408 --EIGRQPWVVQGELKTG-----------------------------EAVSSTLSSTEAT 436 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519 S+ +Y +VA L+ + L + Sbjct: 437 LSLAAFVVIYIGLVVAALYTLRWLIEDELDELGAEPAPDDHWYGPIP 483 >UniRef50_A9G2A7 Cytochrome d ubiquinol oxidase, subunit I n=9 Tax=Bacteria RepID=A9G2A7_SORC5 Length = 460 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 106/500 (21%), Positives = 193/500 (38%), Gaps = 70/500 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ + +R Q L+ +H +F + + ++ I + ++ +G + Y + +K K I Sbjct: 1 MNSLLYARAQMGLSLAFHMIFAAAGVALPLIMVIADALWHRTGDRDYLEFSKRMAKGTAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + G++ G P ++EG AFF E+ F+G++ +G +L Sbjct: 61 LFAVGAVSGTVLSFELGLLWPSFMGTFGEVIGLPFSLEG-FAFFTEAIFLGIYLYGRGKL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H+ LVAL LSA ++++ N M +P F R + + +P + Sbjct: 120 SPRLHLLSGALVALSGALSAFFVILVNACMNDPAG--FTMVDGRPANIDPVAAMFSPPWK 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +H + + Y A + GI A +L+ +++FA+ + L+ ++G + Sbjct: 178 HETLHGILACYQATAFVMTGIHALVLLRHPSSPLFRKAFAVTLAIAGVTALAQPLVGHYA 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 E+G Q KLAA+EA +ET A A + G+PD E +AI+IP L + D Sbjct: 238 AVEVGRGQPAKLAAMEAHFET-SARAPLLVGGLPDVERGEVDYAIEIPAGLSVFLHADPD 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT 361 V GL + + ++ ++ S AV Sbjct: 297 AVVTGLDAIPRDEWPPVTATHLSFQVMVGAGSAMALLAV--------------------- 335 Query: 362 PNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKW 421 + + IP P +A + G + Sbjct: 336 -------VGAVLAWRRRGIPDQRPFLWAAILASPLGIV---------------------- 366 Query: 422 LLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGL 481 + W+ E G RQPW + + T A + L L Sbjct: 367 -------AMEAGWLVTELG-------RQPWIVRGAMRTRDAVTPFP--HLAAPFWTFTAL 410 Query: 482 YTLFLVAELFLMFKFARLGP 501 Y V ++L+ + R P Sbjct: 411 YVFLGVVVVYLLVRQLRAAP 430 >UniRef50_B5HKZ5 Cytochrome bd-I oxidase subunit I n=2 Tax=Streptomyces RepID=B5HKZ5_9ACTO Length = 495 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 102/492 (20%), Positives = 175/492 (35%), Gaps = 65/492 (13%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +R A T H L VP + + F+ +M + + + + W + + FA Sbjct: 16 LLPARELMAFTLATHILLVPFGVALPFITLLMHHRALRRDDAVALKLARRWSAVMAVQFA 75 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G+ TG + F+FG W GD+FG +E AFFLE+ + ++ +GW RL Sbjct: 76 IGIITGTVLSFEFGLLWPGMMGRWGDVFGLGFGVEA-WAFFLEAVLIAIYLYGWRRLKPW 134 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H + + L + + A I+ AN WM P + + + V + + P+ ++ Sbjct: 135 THFWLAVPLPLAALMGAFGIIAANSWMNTPQGFSLDSQ-GKPIHVDVRQAIFTPMFGPEY 193 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 H V + +T + G+ A L+GR + + F + + +LGD + Sbjct: 194 WHFVVAMLLTAGYVVAGVYAVGWLRGRRDRYHRLGFTLPFTVAAILTPVQFMLGDSAARA 253 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 + Q K AA E W+T +FG + + T ++IP I+A T V Sbjct: 254 VFHKQPIKFAATEIVWKTDT-HVPEYMFGRLNSD-GTISGGLKIPQLDSILAGFKPSTQV 311 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 GL + A + + G LL + Sbjct: 312 TGLTSVPASDRPTAVQATIA-------------------HWAFDIMVTIGSLL------I 346 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 A P +W R Sbjct: 347 LLALWYAWSWWRHRDNP------------------------------------GSRWFYR 370 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTL 484 A + VE GW E GRQPW + + + + A +S AG L + ++ +Y Sbjct: 371 CAALAGLACLVTVECGWITTEVGRQPWIVYQHMRVSEAVTSTRAGSLWAMLGIVVVVYVA 430 Query: 485 FLVAELFLMFKF 496 + A L ++ K Sbjct: 431 VIGAFLAVVLKM 442 >UniRef50_B0RQW3 Cytochrome d ubiquinol oxidase subunit 1 n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQW3_XANCB Length = 457 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 106/416 (25%), Positives = 174/416 (41%), Gaps = 8/416 (1%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L R QFA T H + T+G+A L ++E +++ + +++Y D+ +W KLF + Sbjct: 7 ALLLVRGQFAFTIGMHIVLAAFTMGLANFLVVLEALWLRTRRRVYMDVYNYWLKLFSLTT 66 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 A GV TG+ MEF FG +W S G + G + E L+AFFLE+ F+G+ FG ++G Sbjct: 67 AAGVVTGIPMEFVFGLHWGRLSGAAGAVIGPLMFFEVLVAFFLEAGFLGIMLFGMKKVGH 126 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H T +VALGS +SA WIL AN W+ P V + ++ NP + Sbjct: 127 RVHFFATCMVALGSLVSAFWILSANSWLHTPAGFA-RAADGNFLPVDWLRIIFNPSFPWR 185 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 +H + + A I + AW++L+ A+ F++ ++ GD G Sbjct: 186 MLHMSLAALLATAAIIAAVGAWHVLRDTRNPGARLMFSMGLWVIAIVAPLQLLAGDLHGR 245 Query: 244 EMGDVQKTKLAAIEAEWETQPA--PAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + Q KLAAIE W+ PA LF IPD + + N+ + IP + + Sbjct: 246 NTLEHQPQKLAAIEGSWQRPPAGEGEPLRLFAIPDMQAQRNRHELAIPRLGSLYLRHNWT 305 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY- 360 + GL+E + A+ + L + + L L+R Sbjct: 306 GTIAGLREFPRSDLPPVPIVFFAFRAMVGLGLLLIAVGMLSLVLRARGRLYEARWLQRVV 365 Query: 361 ---TPNVADATEAQIQQATKDSIP-RVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 P+ A P V L ++A +++ + Sbjct: 366 VVMAPSGMLAMLCGWVVTEVGRQPFTVYGLLRTAHSTSPLSLPMVASSSVAILVLY 421 >UniRef50_A9ASF6 Cytochrome bd ubiquinol oxidase subunit I n=5 Tax=Proteobacteria RepID=A9ASF6_BURM1 Length = 476 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 126/498 (25%), Positives = 203/498 (40%), Gaps = 69/498 (13%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + LSR+Q A T +H +F T+G+A LA++E + + +G ++Y+ + +FW K+FG+ F Sbjct: 5 ALLLSRIQLAATVSFHIIFPSFTIGLAAWLAVLEAMSIATGNRVYRRVFEFWLKIFGVAF 64 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 +GV +G+ M FQFGTNWS S G I G L E AF LE+TF G+ G R+ Sbjct: 65 GMGVVSGIVMAFQFGTNWSELSRASGPIQGPLLTYESFTAFALEATFFGVMLLGRARVRP 124 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 ++ LVA G+ +SA WILV N WMQ+P+ + ++ ++ N V V+ Sbjct: 125 WFYLTSCILVAAGTTMSAFWILVNNSWMQHPVGYVV--QNGIFVPTDWAAIIFNHVVWVR 182 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 F H + Y+T A + + A Y+LK R A ++ + A V I+ G +G Sbjct: 183 FPHMLLGAYLTTAFCVAAVGAAYLLKDRYRVEATLMVRMSVTLAAALVPLQILFGHLTGD 242 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 + D Q K AA+E W T PAA +F IPD E N+F ++P +IA+ + D+ Sbjct: 243 YLHDDQPAKFAAVEGRW-TDEQPAAEVIFAIPDAAHERNRFEWKVPVLGSLIASGTADSR 301 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 +GL + + A+ ++ G +L + Sbjct: 302 EVGLTDFAAADRPPVLIPFFAFRVMAG--------------------CGLIMLALAWAGT 341 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423 VA ++ +G + W + Sbjct: 342 VAARRGRLERRRWLLWP---------------LACSFPLGFIAILAGWFTAEVGRQPWTV 386 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICGLY 482 VL TA A + LTA ++ L +Y Sbjct: 387 W------------------------------GVLRTADALTPGLTAHFAAATLALFVAIY 416 Query: 483 TLFLVAELFLMFKFARLG 500 ++ + + R G Sbjct: 417 AFIFCFGVYYIVRIVRRG 434 >UniRef50_A3NKU0 Cytochrome D ubiquinol oxidase subunit I n=41 Tax=Proteobacteria RepID=A3NKU0_BURP6 Length = 481 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 129/386 (33%), Positives = 182/386 (47%), Gaps = 7/386 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + LSRLQFA H L LT+G+A +A +E + +G+ +Y+ ++ FW ++F + Sbjct: 4 IDALLLSRLQFAWVIALHILLPALTVGLACYVATLEALAWATGRDVYRRLSAFWLRIFAV 63 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 +F +GV +G+ M FQFGTNWS + ++ G +A E L AFFLES F+G+ FG R+ Sbjct: 64 SFGMGVVSGIVMPFQFGTNWSRFVAATSNVIGGFMAYEVLTAFFLESAFLGVLLFGRRRV 123 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H LVALG+ LS+ WIL N WMQ P F R S ++L+P Sbjct: 124 PQWAHALAAALVALGTLLSSFWILAVNSWMQTPSGYRFV--DGRFYPESIVAVLLSPSFP 181 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + HTV + VT A +LG A Y+L R A ++ +A F AV I LGD Sbjct: 182 YRLAHTVVAFVVTTAFVVLGTGAHYLLSARAQAESRVMVKMALGFLAIAVPVQIALGDAH 241 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 G Q KLAA+E W+T A TLF IPD ETN+F + IP + T + Sbjct: 242 GLNTLAHQPVKLAAMEGLWDTGRGVRA-TLFAIPDGARETNRFELAIPTLGSLYLTHDPN 300 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL----GYGLLL 357 V GLK+ + A+ L+ L +R L G+ Sbjct: 301 GLVRGLKDWPRDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTLWRGGRLYVRRGWLATC 360 Query: 358 KRYTPNVADATEAQIQQATKDSIPRV 383 + TP A A P Sbjct: 361 RAATPIGFVAVLAGWTTTEAGRQPWT 386 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 1/153 (0%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 L L Y + + ++ +D P VA ++FAFR+MV G ++LAI+ Sbjct: 285 LAIPTLGSLYLTHDPNGLVRGLKDWPRDERPPVAVVFFAFRLMVGLGLVMLAIVIRGLTL 344 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAG 469 R+ ++ L P+ ++AV AGW E GRQPW + ++ TA + + LT Sbjct: 345 WRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSLTTT 404 Query: 470 DLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 D+ S+ Y A L+ + RLGP Sbjct: 405 DVALSLAAYVLCYLAMFGAGFVLLLRLVRLGPP 437 >UniRef50_UPI0001C31BDB cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDB Length = 458 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 109/499 (21%), Positives = 194/499 (38%), Gaps = 73/499 (14%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D ++ +R A++ H + ++ +E +Y+ +G +Y+ + + W ++ Sbjct: 19 DHLDQARQMQAMSFAVHIPLTCFGVAFPAVVLFVEWLYLRTGDPLYRRLARRWSRIMVAL 78 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 FA+GV TG + F+ G W + GD+FG AIEG AFFLE+ F+ ++ +GWDRL Sbjct: 79 FAVGVVTGTILSFELGMLWPEFMGTFGDVFGLGFAIEG-FAFFLEAIFIAIYVYGWDRLP 137 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL-NPVAQ 181 H + + L A ++ NGWM NP F V E + N Sbjct: 138 PKWHFASGFPIVFTGVLGATMVIAVNGWMNNPGG--FRLVNGEAVDVKPWEALFGNSFFW 195 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK-GRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 + VH + Y+ + + AW L+ GR + + + AI + A +++GD Sbjct: 196 HEVVHMYVAAYIVVGFLLAAVYAWGKLRHGRWGRYERTALAIPLTIAAFAAPVQLLVGDW 255 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 + E+ Q KLAAIE T + A+ +FG D++ + I+IP L ++A Sbjct: 256 AAREVAVHQPVKLAAIEGLQRT-TSGASEHIFGWYDKDTGEIDYGIEIPKLLSLLAFHDP 314 Query: 301 DTPVIGLKELMVQHEE-RIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKR 359 + V GL + + I A+ + + SG AV +K Sbjct: 315 NATVRGLDSVPPEDRPGPINTVRFAFQAMVLIGSGLAMLAVFVLLVRWRKG--------- 365 Query: 360 YTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK 419 R+ + +R +V G + + + + +G + Sbjct: 366 ----------------------RLPRSVWFYRALVLAGPGAVVALICGWITT---EVGRQ 400 Query: 420 KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 W++ V+ T A + AG + L+ Sbjct: 401 PWVVY------------------------------NVMRTDEAVTG--AGGVPVGYGLLA 428 Query: 480 GLYTLFLVAELFLMFKFAR 498 +Y LVA +++ + AR Sbjct: 429 LVYVGLLVAVWWILRRLAR 447 >UniRef50_A4FDV8 Cytochrome d ubiquinol oxidase, subunit I n=6 Tax=Bacteria RepID=A4FDV8_SACEN Length = 471 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 97/513 (18%), Positives = 187/513 (36%), Gaps = 72/513 (14%) Query: 5 VELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFA 64 + +R Q + +H + +GM L + +G Y+ + + W + G+ FA Sbjct: 18 LVAARTQMGFSLGWHIVIACFGVGMPGLTLFAQWRGQRTGDPAYESLARTWARAMGVLFA 77 Query: 65 LGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV 124 +G +G + F+ G W GD+ G P +EG AFF+E+ F+G++ + WDRL Sbjct: 78 VGAVSGTILSFEMGLLWPGLMGEFGDVIGLPFTLEG-FAFFIEAIFLGIYLYAWDRLPPR 136 Query: 125 QHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKF 184 H+ V L SA +++ AN WM P F+ + V E + NP + Sbjct: 137 VHLLTGVPVVLAGVASAFFVVTANAWMNQPRG--FDLVDGEVVGVRPWEAMFNPATPPQT 194 Query: 185 VHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYE 244 VH + + ++ + + A + +GR + F + +F + +GD + + Sbjct: 195 VHMIVAAFMVAGFGMASVYAVALARGRRDRHHRLGFLVPFTFAAVLAPVQVAVGDWAAHF 254 Query: 245 MGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPV 304 +G Q KLAAIE T P A +L GI ++A++IP AL ++A D V Sbjct: 255 LGQYQPLKLAAIEGLARTAPG-APLSLGGIYT--GGELRYALEIPNALSLLAHWDPDAIV 311 Query: 305 IGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNV 364 +GL + + + + ++ ++ + + Sbjct: 312 LGLDQAPPRFQPPVNVVHLSFQVMVGIGFALVLLGIW----------------------- 348 Query: 365 ADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLR 424 + + +PR ++A A + + +G + W++ Sbjct: 349 -----LGVSWWRRRDLPRSRW------FLLASAAAGPAAVVAMEAGWVVTEVGRQPWIVY 397 Query: 425 AALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTL 484 L A + L ++ + +Y + Sbjct: 398 DVLLT------------------------------RDAVNPQPG--LWAGLLTVLVVYAV 425 Query: 485 FLVAELFLMFKFARLGPSSLKTGRYHFEQSSTT 517 A + ++ + ARLGP ++ Sbjct: 426 LTAATVHVLRRLARLGPVPVRGLAPQEHAPRPP 458 >UniRef50_UPI0001C428CF cytochrome d (bd-type) ubiquinol oxidase subunit I n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C428CF Length = 447 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 116/513 (22%), Positives = 196/513 (38%), Gaps = 73/513 (14%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D V L+R F + +H +F L +G+ ++ + E + ++ + Y + K W K I Sbjct: 1 MDNVLLARSLFGSSMAFHIIFATLGVGITLMILLAEILRLIKKDEDYGLLAKRWTKGVAI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + + +G + W Y VG + P IE + AFF+E+ F+ ++ + DRL Sbjct: 61 LLGVAIPSGTIVAVMLSLLWPGYMEIVGQVIALPFQIE-IFAFFIEALFLSIYVYAADRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + + VALG+ SA+ I A+ WM P F++ + V E V NP Sbjct: 120 SPTMRIITVFFVALGATASAVLITDAHAWMNTPRG--FDYVDGVVSNVRPLEAVFNPSIY 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKG----RDFAFAKRSFAIAASFGMAAVLSVIVL 237 V +H + S Y+TGA + ++A+ + +G R+ + K+ ++ + Sbjct: 178 VTAMHVLGSAYMTGAFMLGSVAAYKLFRGGLTARETTYHKKGLMLSLGVALVMSFYTANN 237 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G ++ + + KLAA E +ETQ A + G PD E I+IP L +AT Sbjct: 238 GHDTAIMLHEEIPVKLAAAEGLFETQ-DNAPLAILGTPDPEAGRVIGGIEIPGMLSWLAT 296 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 S D V GL + + +G G +L Sbjct: 297 GSTDGVVQGLNDFPRDEWPPLF-----------------------VHTLFNVMVGIGTVL 333 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 ++ + + P+ Sbjct: 334 LGLAGIFWVIWFLGRKK--QKAFPKW---------------------------------- 357 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVL 477 LL A + PL I +E GW + GRQPW I V TA A ++ +G+L L Sbjct: 358 ----LLGALILCGPLSMIGIETGWIFSCTGRQPWTIFGVQRTAEAATN--SGNLGMLFFL 411 Query: 478 ICGLYTLFLVAELFLMFKFARLGPSSLKTGRYH 510 LY LV +M+ + + P + + Sbjct: 412 FLTLYLSLLVLTGLVMYFYFKRNPVTHELHSTT 444 >UniRef50_B0R8N5 Cytochrome d ubiquinol oxidase subunit I n=4 Tax=Halobacteriaceae RepID=B0R8N5_HALS3 Length = 482 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 117/468 (25%), Positives = 191/468 (40%), Gaps = 35/468 (7%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 +L SR+QF T H +F L++G+A + V + +Q Y + FW K+F Sbjct: 17 LLSPEIASRMQFGWTISVHIIFASLSIGLAPFIIYFTWKDVRTNEQRYARLRSFWVKVFA 76 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 + F +G TG+ M FQFGTN+ ++ G++ G PLA E MAFFLE+ F+G+ +G +R Sbjct: 77 VGFVMGTVTGIPMSFQFGTNFPQFATIAGELIGGPLAFEAKMAFFLEAVFLGVLLYGRER 136 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNP 178 + ++ + LV +G+ LS WILV N WMQ P + ++ L P Sbjct: 137 VADRTYVLSSVLVGVGAWLSGFWILVVNAWMQTPRGYEMVTRNGMEVAKLTDPVAAFLTP 196 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLG 238 +VH + + ++ A+ + G+SA+ + K D + +A + + V G Sbjct: 197 RMPWMYVHMMNASVISVALLVAGVSAYLVWKKPDADAWNSALKLAVVLLLVSAPFQAVHG 256 Query: 239 DESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP------DQEEETNKFAIQIPYAL 292 D G + D Q K AA+EA +ET A L P N F + +P Sbjct: 257 DAYGRHVEDTQPQKFAAMEAHYET--GSADLHLLAFPKSLDALTDPRTENLFTVSLPGIG 314 Query: 293 GIIAT-RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 +A+ D VIGL E + + ++ + L A+ + + + L Sbjct: 315 SFLASGGDFDAEVIGLNEY--EENPPVALVFWSFRFMVGLGFLFIGLALWGGYLTYRGRL 372 Query: 352 G----YGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC------GFLLL 401 Y + +P A P V V+ L L Sbjct: 373 TESTRYLKSMIAASPFGYAALLTGWYVTEIGRQPWVIQGELKTSEAVSSTLTGTEATLTL 432 Query: 402 AIIALSFWSVIRNRIGEKKWLLRAAL------------YGIPLPWIAV 437 + + ++I + KWL+R L + PLPW+ Sbjct: 433 VGFVVLYIALILTALYVLKWLIRGELRSLGVQESSAGRWRGPLPWVTS 480 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 6/145 (4%) Query: 376 TKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWI 435 + P VA ++++FR MV GFL + + + R R+ E L++ + P + Sbjct: 332 EYEENPPVALVFWSFRFMVGLGFLFIGLALWGGYLTYRGRLTESTRYLKSMIAASPFGYA 391 Query: 436 AVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMF 494 A+ GW+V E GRQPW I L T+ A SS LT + ++V LY ++ L+++ Sbjct: 392 ALLTGWYVTEIGRQPWVIQGELKTSEAVSSTLTGTEATLTLVGFVVLYIALILTALYVLK 451 Query: 495 KFAR-----LGPSSLKTGRYHFEQS 514 R LG GR+ Sbjct: 452 WLIRGELRSLGVQESSAGRWRGPLP 476 >UniRef50_B5ECJ4 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Geobacter RepID=B5ECJ4_GEOBB Length = 441 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 99/428 (23%), Positives = 182/428 (42%), Gaps = 9/428 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D + +R ++ +H ++ + +G+ LL + E + + +G + + ++ + W + + Sbjct: 1 MDDLLAARALMGVSLAFHIVYATIGIGLPLLLMLAEGLALKTGDEEWHEVARRWIRPAAV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G +G + F+ G W + + G + G ++EG AFF E+ F+ L+ +G RL Sbjct: 61 LFAIGAVSGTILSFELGLLWPKFMVFAGPMIGLAFSMEG-FAFFTEAIFLALYSYGEQRL 119 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + T + + S +SA++++ ANGWM P F + N Sbjct: 120 SRRAQFFCTVPMVVASAISAVFVISANGWMNTPSG--FRMVNGVASDIHPLVAFANQAWP 177 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + VH + YV + G A +L+GR K++ ++ + G A+ +++ GD + Sbjct: 178 HQAVHGTFAAYVATGFAMAGFYAADLLRGRKTTQVKKALTLSLAVGTLALPLMLMSGDWA 237 Query: 242 GYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVD 301 + + QK KLAA EA ++T A A + G PD E T ++AI+IP L +A + Sbjct: 238 AEALAEHQKAKLAAAEAHFKTMAA-APLVIGGWPDPETGTVRYAIKIPKLLSYLANGDAN 296 Query: 302 TPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKK-----DLGYGLL 356 + V GL + R + L+ A + ++ G +L Sbjct: 297 SVVQGLDAFPLGSTPDPRIVHPFFDLMVGSSFVMAAAAAWFWWLRWREKEVTLKRGALIL 356 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI 416 + P A E+ P + Y V LL I A + + Sbjct: 357 VLIAAPFGMIALESGWMVTEFGRQPWIIQGYLRTSEAVTPNGGLLLIFATFLMVYLALSV 416 Query: 417 GEKKWLLR 424 G + LLR Sbjct: 417 GILRLLLR 424 Score = 84.8 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 70/193 (36%), Gaps = 5/193 (2%) Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNS--MKKDLGYGLLLKRYTPN 363 G E + A + + + + + ++ + LL Sbjct: 234 GDWAAEALAEHQKAKLAAAEAHFKTMAAAPLVIGGWPDPETGTVRYAIKIPKLLSYLANG 293 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS-VIRNRIGEKKWL 422 A++ + S P ++ F +MV F++ A A +W + K+ Sbjct: 294 DANSVVQGLDAFPLGSTPDPRIVHPFFDLMVGSSFVMAAAAAWFWWLRWREKEVTLKRGA 353 Query: 423 LRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLY 482 L L P IA+E+GW V E+GRQPW I L T+ A + G L+ +Y Sbjct: 354 LILVLIAAPFGMIALESGWMVTEFGRQPWIIQGYLRTSEAVTPN--GGLLLIFATFLMVY 411 Query: 483 TLFLVAELFLMFK 495 V L L+ + Sbjct: 412 LALSVGILRLLLR 424 >UniRef50_Q67NR6 Cytochrome D ubiquinol oxidase subunit I n=1 Tax=Symbiobacterium thermophilum RepID=Q67NR6_SYMTH Length = 420 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 175/403 (43%), Gaps = 10/403 (2%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL 71 A + +H +F L +GM LLA + +++ + + Y+ + K W + + FA+G +G Sbjct: 1 MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT 60 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + F+ G W + H+ G G +EG AFF E+ F+GL+ +G +R+ V H Sbjct: 61 GIAFELGLLWPEFMHFAGSTVGPAFTLEG-YAFFTEAIFIGLYLYGRERMRPVAHWLTAV 119 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 VA+ S+ + AN W QNP+ + E ++ + +NP V VH+ + Sbjct: 120 AVAVSGAASSFLVTAANAWQQNPVG--VDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIAC 177 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKT 251 Y + G+ AW ML+GR +++ IA + G+ A +++ + GD S + Q Sbjct: 178 YAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPE 237 Query: 252 KLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELM 311 KLAA+EA + TQ A A + G+P+ EE T A+ +P L +A +D V GL + Sbjct: 238 KLAAMEALFVTQ-ARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVP 296 Query: 312 VQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMK------KDLGYGLLLKRYTPNVA 365 Q + ++ L+ + + + +D LL +P Sbjct: 297 RQEWPNVPLVHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGY 356 Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSF 408 A EA + P V +A+ F Sbjct: 357 LALEAGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGF 399 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 9/205 (4%) Query: 277 QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGST 336 Q+ A+ + A+ + T + V + +H+ M+A + + Sbjct: 203 QKALRIALAMGLIAAVTMPLTGDLSAKV------VARHQPEKLAAMEALFVTQARAPLLI 256 Query: 337 DQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVAC 396 + ++ + LL DA A + + + P V ++ +F++MV Sbjct: 257 GGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEWPNVPLVHISFQLMVGA 316 Query: 397 GFLLLAIIALSFWSVIRN--RIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIG 454 G ++ + W R ++ + LL + PL ++A+EAGW V+E GRQPW I Sbjct: 317 GIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGWIVSETGRQPWTIW 376 Query: 455 EVLPTAVANSSLTAGDLIFSMVLIC 479 +V+ TA A + + + SM Sbjct: 377 KVMLTADAVTP-SGSTMALSMAGFT 400 >UniRef50_D2B3E9 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3E9_STRRD Length = 443 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 150/519 (28%), Positives = 218/519 (42%), Gaps = 82/519 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 +DI++L+RLQFA+T H+LFV LTLG+ L+AIM+T + + ++ MT+FWG+ Sbjct: 1 MDILDLARLQFAVTTGVHWLFVILTLGLVPLVAIMQTRSLRARDRVRRAALDRMTRFWGQ 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 ++ IN+ALG+ TGL MEFQFG WS Y G++FGAPLA+E L+AFF ESTF+G++ FG Sbjct: 61 IYVINYALGIVTGLVMEFQFGLTWSGLGKYTGNVFGAPLALETLIAFFAESTFLGMWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 WDRL H+ + WLV + SA W+LVANG+MQ P+ S + F L+ N Sbjct: 121 WDRLRPGLHVTLIWLVTATAYTSAFWVLVANGYMQAPVGSVV--RDGVAYLTDFGALLTN 178 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P A V H + +TG +F+ G+SA ++ +GR+ + V Sbjct: 179 PSALVPLAHVSLAALLTGGLFVAGVSAHHLRRGRED--FRGPLRTGVLVAAVVTFPVYAA 236 Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 G + Q K A ++ P I + Y LGI+A Sbjct: 237 GGLQYPIIAATQPAKTAMMD----------------EPGWVLWGQYVMIGLGYLLGILAL 280 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 + L+V E +R + A + + + FN G LL Sbjct: 281 AAF---------LVVFREPLLRRRLPAVVAVALTAYPAGEYFGGFLFNEPGPYRGPIYLL 331 Query: 358 KRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG 417 L + A+ + + Sbjct: 332 -----------------------------------------WFLIMGAVLLSRPVGPLLR 350 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-LTAGDLIFSMV 476 IPLP +A GW E GRQPW + L TA A S LT +I S+ Sbjct: 351 -------LLPILIPLPLVASLGGWISREIGRQPWIVYGRLTTAQALSPGLTRTMIISSLA 403 Query: 477 LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSS 515 + V L+ + AR G T + Sbjct: 404 GFVVVLGALAVTNWVLIARTARRGLEPAPTEPAAEPVPA 442 >UniRef50_A8V4U1 Cytochrome oxidase d subunit I (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4U1_9AQUI Length = 330 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 20/335 (5%) Query: 186 HTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 HTV ++T +F +G+ A+Y++K R AK F AA+F + A ++ +++GD GYE+ Sbjct: 1 HTVDGAFITAGIFAMGVLAFYLIKRRYVEMAKTGFKFAATFTVIATIAQVIIGDLHGYEV 60 Query: 246 GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVI 305 Q KLA +E ++ET+ A+ LFGI DQE + ++ ++IP L ++ + V Sbjct: 61 AHQQPLKLAMVEGKFETEKC-ASLDLFGIIDQENKQSRMLLKIPCLLSFLSYHDFNAEVK 119 Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVA 365 G+ EL+ ++ + + +LEQ + + + Sbjct: 120 GIDELINDYQNKSKEYANLIPVLEQKLQQAQTPEEKQKIKD---------------QLAE 164 Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 +A + +P + ++ F +MV GF + I L++W + + + K L Sbjct: 165 AKVKAHAFNIKYEDLPSIPLVFTTFHLMVYLGFYFVLIALLAWWFAKKGTLEKHKGFLWL 224 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLF 485 + IPLP++A GW AE GRQPW + +L T S + A + S+ + +YT+F Sbjct: 225 LVLSIPLPYMANLLGWMSAEVGRQPWIVFGMLLTRDGVSFVPASQVALSIAVFTTIYTIF 284 Query: 486 LVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 + L+L+FK GP+ E+S P Sbjct: 285 FIVFLYLIFKTIGKGPNI----TTAKEESVPPVNP 315 >UniRef50_D2EF73 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF73_9EURY Length = 471 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 99/504 (19%), Positives = 199/504 (39%), Gaps = 49/504 (9%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M+++V + H L V + + + +++I E V + ++Y + K Sbjct: 1 MVNLVLFDAGLMGYSLAVHILLVTVGMTLPIMMSIAEFVSIKYKIKLYDVLAKRLANALI 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I FA+G A+G+ + + W + +G + PL +E + AFF E+ F+G++ + W++ Sbjct: 61 IFFAVGTASGVVVAIELFVLWPKFISVLGQVGILPLYME-IFAFFTEAIFLGIYIYFWNK 119 Query: 121 L-GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF--NFETMRMEMVSFSELVLN 177 +++H ++ +A+G+ +S ++I + N +M P + T ++ V+ ++ Sbjct: 120 FKSRMKHWLLSVFIAIGAVMSGVFITMINAFMNTPNGFNIPYYLSTGKIIDVNPFAVLNT 179 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR--DFAFAKRSFAIAASFGMAAVLSVI 235 P V+ H + S GA F L A+ +LK + + + K++ IAA+ + +++ + Sbjct: 180 PTTWVEIGHVIGSTIFAGAAFFLAYFAYKLLKTKGMEREYYKKAAKIAAAIVIISIILTV 239 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGII 295 ++G ES ++ Q K AA+E + + P A +I IP + + Sbjct: 240 IIGIESITDLMLYQPEKFAALEMNFNSGPHVAEVI---GGFLVNNKTVDSINIPGLMSFL 296 Query: 296 ATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGL 355 AT S + + L ST V N+ +G G+ Sbjct: 297 ATGSFNGAIASNDSLAA-------------------YPKSTWPPVAVVHNTFDIMVGIGV 337 Query: 356 LLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNR 415 L+ I++ + I + Sbjct: 338 LIGVVMIIFLLIWLLNIRKIRDKFESN-------------------HFFNKILSNKIFSD 378 Query: 416 IGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSM 475 + +L+ + L +E GW E GRQPW I V+ + A + T+ ++ Sbjct: 379 PFDNPLVLKGLIVIGVLAGFLLEDGWVTDEVGRQPWIIYNVMTVSAAAN--TSPSIVPIG 436 Query: 476 VLICGLYTLFLVAELFLMFKFARL 499 + I Y + L A L + + Sbjct: 437 IAIIAFYIVVLPATLLFVRNVIKK 460 >UniRef50_B1YJ89 Cytochrome bd ubiquinol oxidase subunit I n=85 Tax=Bacillales RepID=B1YJ89_EXIS2 Length = 462 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 115/523 (21%), Positives = 198/523 (37%), Gaps = 80/523 (15%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D V LSRL LT +H +F + +G+ ++ E + + Y + + W + + + Sbjct: 4 DPVMLSRLLTGLTLAFHIIFATIGVGVPLMVLAAEYIGIKRKDSDYILLARRWTRGYIVT 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 A+GV TG + Q W G PL +E AFF E+ F+G++ + WDR Sbjct: 64 VAVGVVTGTAIGLQLSLLWPSLMQVAGQTIALPLFME-TFAFFFEAIFLGIYLYTWDRFK 122 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 H + V +G+ LSA +I N +M +P F + + + + N Sbjct: 123 NPWLHWLIGIPVVIGATLSAFFITTVNSFMNSPEG--FKIVNGTLTQIEPLKAMFNTATP 180 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-----DFAFAKRSFAIAASFGMAAVLSVIV 236 K H + S Y+T A + I+A+++L+ + + A+ K++ + G+ S + Sbjct: 181 TKATHVIVSAYLTVAFILAAIAAFHLLRKKTLSAAETAYHKKALRLTVMAGLIFAFSTAL 240 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEE---TNKFAIQIPYALG 293 +GD SG + Q KLAA E +ET A GI D++ + K A++IPYAL Sbjct: 241 VGDFSGKYLAKYQPEKLAAAEWHFET-TNEAELIFGGILDEQADGSYEIKGAVKIPYALS 299 Query: 294 IIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGY 353 I+A + DT VIGL E + + + + Sbjct: 300 ILAGGAPDTEVIGLNEFAKEDQAPLF-----------------------VHYFFDIMVSI 336 Query: 354 GLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIR 413 G+ L + A + + R + G L + I + Sbjct: 337 GMYLAAISALFILAFRLKKLN---------PYNKWLLRGIFIGGPLAIVSIEAGW----- 382 Query: 414 NRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIF 473 AE GRQPW + ++ TA A + T+ + Sbjct: 383 ----------------------------MYAEIGRQPWTLYGIMRTADA--ATTSTAVGP 412 Query: 474 SMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 ++L LY L ++ + + P + H + Sbjct: 413 MLILFSLLYLLLGTICTVVLLRMFKNNPVGKELADDHHTRGEA 455 >UniRef50_D1A756 Cytochrome bd ubiquinol oxidase subunit I n=3 Tax=Actinomycetales RepID=D1A756_THECD Length = 394 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 155/260 (59%), Gaps = 4/260 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 +D+++L+RLQF +TA HFLFV LTLG+A ++A+M T +V +G + + MT+FWG+++ + Sbjct: 1 MDVLDLARLQFGVTAGLHFLFVVLTLGLAPVVAVMNTRWVRTGDPLQERMTRFWGQIYIV 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+ALG+ TGL MEFQFG +WS +HY GD+FGAPLA+E ++AFFLESTF+GL+ FGW RL Sbjct: 61 NYALGIVTGLVMEFQFGLSWSGLTHYAGDVFGAPLAVETMVAFFLESTFLGLWIFGWHRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ W+V L + SA WI+VAN ++QNP + R+ + L+ N Sbjct: 121 PRRAHLACIWIVTLTAYASAFWIMVANSFLQNPAGAAVT--GDRLALTDAGALLTNKALV 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLK--GRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 F H + +G TGA ++G SA+ + + G D RS + V + G Sbjct: 179 FSFPHVIGAGLTTGAFMVIGASAYRLWRHPGEDRELFTRSLRTGVVLAVHGVPIAVAFGF 238 Query: 240 ESGYEMGDVQKTKLAAIEAE 259 + + + AA Sbjct: 239 AQFATVPEGKFDGAAASTGL 258 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 2/112 (1%) Query: 389 AFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGR 448 +M+ G LL L +I+ + +W + PLP+ A GW E GR Sbjct: 257 GLGVMILIGEALLMATLLFLLPLIK-VLPHWRWTHPLLMALTPLPFAAAILGWIAREMGR 315 Query: 449 QPWAIGEVLPTAVANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARL 499 PW I + L A A S LT G + S+ + TL V + L+ K R Sbjct: 316 YPWMIRDRLTVADALSPGLTPGMITASLAGFTTVLTLLAVIDYALIAKIVRR 367 >UniRef50_Q97AR6 Cytochrome d ubiquinol oxidase subunit I n=5 Tax=Thermoplasma RepID=Q97AR6_THEVO Length = 458 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 93/508 (18%), Positives = 175/508 (34%), Gaps = 77/508 (15%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++I RL FA + H L V +++G++ +L ++E + + Y +T+ K + Sbjct: 1 MNIGTFDRLLFAYSIGSHILIVLMSIGLSVILPVLEYIAIKYKDVYYDLLTRRVAKALVM 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 FA+G A+G M + + + + + P E + AFFLE+ + +++ WD Sbjct: 61 FFAVGTASGAVMAVELIDLFPKFMTIIAVVGVLPFYYE-IFAFFLETIMLVSYYYYWDVF 119 Query: 122 -GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNF--ETMRMEMVSFSELVLNP 178 ++ H +T+ VA G+ SA++I + N WM P + ++ +T ++ V+ L P Sbjct: 120 KNRMHHWLLTFGVAGGTLASAVFITMINAWMNTPNGFNISYYEKTGKLIDVNPFITALTP 179 Query: 179 VAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF---AKRSFAIAASFGMAAVLSVI 235 + H V G M + A+ L+ + + + M ++ Sbjct: 180 STGREVFHVVIVTAFAGLMVLGAFFAYQYLRAKTEEAKTLYMKGLKVTFPMNMFLIIMAG 239 Query: 236 VLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEET--NKFAIQIPYALG 293 + G + Q K AA++ A LFG ++ I+IP+ Sbjct: 240 LSGTLEMSGLLTYQPEKYAALDLNPYPIARDAPEHLFGTIVEKNGHYYVLGGIKIPFVQS 299 Query: 294 IIAT-RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLG 352 ++A +++TPV GL + + ++ +KK Sbjct: 300 LLAGNGNLNTPVPGLSQFPTSTWPPLAVHDTFDLMVIGGTLLGLFLLSVLIAWILKKK-- 357 Query: 353 YGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 Y + MVA + I + Sbjct: 358 ---------------------------------PYESKGFMVAQILFAILTIPIYIGGW- 383 Query: 413 RNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLI 472 E GRQPW I V+ A + +I Sbjct: 384 -----------------------------VTDEVGRQPWIIYNVMTVYQAANYSP--SII 412 Query: 473 FSMVLICGLYTLFLVAELFLMFKFARLG 500 LI YT+ + + F+ + G Sbjct: 413 VPGYLIMAFYTILMPFSYWYAFRLMKQG 440 >UniRef50_B1T2Z3 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T2Z3_9BURK Length = 273 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 151/268 (56%), Positives = 192/268 (71%), Gaps = 2/268 (0%) Query: 251 TKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKEL 310 KLAAIE+EWETQPAPA+FTL GIP+Q+EE +AI+IPYALG+IATRS+D PVIGL+EL Sbjct: 1 MKLAAIESEWETQPAPASFTLIGIPNQKEERTDYAIKIPYALGLIATRSIDEPVIGLREL 60 Query: 311 MVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEA 370 EE I++GM AY L++++ G T +A R F+ K+ LGYGL+LK++TPNV DAT Sbjct: 61 AKLSEEHIQSGMVAYGALQKIKQGDTSEATRALFDQHKQYLGYGLMLKQFTPNVTDATPE 120 Query: 371 QIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRI--GEKKWLLRAALY 428 QI+ A K +IP VAP++F+FRIMVA GFL +A +FW R + ++W LR A++ Sbjct: 121 QIKAAAKKTIPPVAPVFFSFRIMVALGFLFVATFVAAFWFCARRELLQDNRRWFLRYAVW 180 Query: 429 GIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVA 488 IPLPWIA+E GW VAE GRQPW I VLPT ++ SSL DL S+ YT V Sbjct: 181 AIPLPWIAIEFGWIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVI 240 Query: 489 ELFLMFKFARLGPSSLKTGRYHFEQSST 516 E+ LMFK+ARLGPSSL TGRYH E ++ Sbjct: 241 EIKLMFKYARLGPSSLHTGRYHHEIAAA 268 >UniRef50_UPI000038E145 cytochrome d ubiquinol oxidase subunit I n=2 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E145 Length = 502 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 95/540 (17%), Positives = 171/540 (31%), Gaps = 89/540 (16%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVAT 69 FA T H L V L++G+A + I E + + + Y + K I FA+G A+ Sbjct: 15 AMFAYTISAHILLVSLSMGLAITVTIAEFLALKKKDKYYDTLAYKLSKALVIFFAVGTAS 74 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMC 128 G M + W + VG++ P +E + +F LE+ + ++ + W D + +H Sbjct: 75 GTVMAMELFLFWPSFMKLVGEVAMGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWG 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFN--FETMRMEMVSFSELVLNPVAQVKFVH 186 ++ V +G+ LSA + N WM P D T + V+ + + +H Sbjct: 134 LSLAVTIGTYLSAFTVTEINAWMNTPNGFDVAKFVTTGAVTNVNPFAPFITASTAAEELH 193 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAF---AKRSFAIAASFGMAAVLSVIVLGDESGY 243 + Y G ILG + LK + + +R I A F + ++ + + G Sbjct: 194 MSGAVYYAGIAMILGYLIYKYLKTTNMSEKMIYRRGINITAVFMILDIIYLGITGSNELS 253 Query: 244 EMGDVQKTKLAAIEAEWETQPAP-----AAFTLFGIPDQEEETNKFAIQIPYALGIIATR 298 + ++ K A+E + A +FG+ +A PY ++A Sbjct: 254 TLMVIEPIKYTALELDLHATIGTSFATMAPEHIFGVL--INHKLAYAPSFPYIQSLLA-- 309 Query: 299 SVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLK 358 G + G TD V + Sbjct: 310 ---------------FPLTFGKGSIPGLIPLTTYKGVTDYGVWPPY-------------- 340 Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIG- 417 ++ +MV G L+ R + Sbjct: 341 --------------------------IVHDTLDLMVGFGVLMGLYWLYVVVQYFRKKDPL 374 Query: 418 EKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI---------------GEVLPTAVA 462 ++ L + + +E GW+ AE GR P+ I + A A Sbjct: 375 SHRFTLLGGIAVAIMGVFTMEDGWYTAEVGRVPYIIRSPVPGGFVVDGVKHYGTMTIAQA 434 Query: 463 NSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 S+ + + I Y + K +L + + AR Sbjct: 435 ASTSPLVFPLG--IAIIIFYLAVFPLTFYFAGKVMKLSNVDEDLKLGEDDIKMEDERKAR 492 >UniRef50_A7NEE2 Cytochrome ubiquinol oxidase n=4 Tax=Francisella tularensis RepID=A7NEE2_FRATF Length = 364 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 7/292 (2%) Query: 96 LAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI 155 E L AFF+E+ +G+ FGW R+ K H + + G LSA WIL AN WMQ P Sbjct: 2 FTYEVLTAFFIEAGTLGIMIFGWGRINKYVHFLANFTIFAGVTLSAFWILSANSWMQTPD 61 Query: 156 ASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF 215 N+ + E+ S+ ++ NP +++H + + Y++ M ILG+SA+Y++K + +F Sbjct: 62 G--VNYVNSKFEVYSWYHVIFNPSVIPRYIHMLMAAYLSTLMVILGVSAYYLIKDKYHSF 119 Query: 216 AKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP 275 AK + + +S +++GD+ G E+ + Q K AAIE W+TQ A LF P Sbjct: 120 AKTCIKFSLISILILSISQLMIGDDVGREVHEHQPLKTAAIEGVWDTQKG-APLVLFAYP 178 Query: 276 DQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGS 335 + +E N FAI+IP +I T +D +IGLK + + + ++ ++ + + Sbjct: 179 SEAQEKNLFAIEIPKLASLINTHELDGELIGLKSVPEKDRPVVAVVFYSFRIMVGIGTLM 238 Query: 336 TDQAVRDQFNSMKKDL----GYGLLLKRYTPNVADATEAQIQQATKDSIPRV 383 + +K + + L TP AT A P V Sbjct: 239 ILIGLVGTLLLARKKIESSKWFLKLCTLTTPLGFVATITGWFTAEFGRQPWV 290 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 351 LGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWS 410 + L + D ++ + P VA ++++FRIMV G L++ I + Sbjct: 189 IEIPKLASLINTHELDGELIGLKSVPEKDRPVVAVVFYSFRIMVGIGTLMILIGLVGTLL 248 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGD 470 + R +I KW L+ PL ++A GWF AE+GRQPW + +L T + S L+ Sbjct: 249 LARKKIESSKWFLKLCTLTTPLGFVATITGWFTAEFGRQPWVVYNILRTEYSVSDLSFWQ 308 Query: 471 LIFSMVLICGLYTLFL-VAELFLMFKFARLGPSSLKTGR--YHFEQSSTTTQ 519 + S+ I +Y + +F+ GPS+ R Y + QS Sbjct: 309 VFSSLASIIIVYFIIFGYFYFKYLFRIINGGPSTDGEERMPYSYFQSVEKNA 360 >UniRef50_D2B5X5 Cytochrome bd ubiquinol oxidase, subunit I n=3 Tax=Actinomycetales RepID=D2B5X5_STRRD Length = 415 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 108/273 (39%), Positives = 166/273 (60%), Gaps = 6/273 (2%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++ ++L+RLQFALTA HFLFV LTLG+A L+A+M+T L+G ++ MT+FWG+L+ I Sbjct: 1 METLDLARLQFALTAGAHFLFVALTLGLATLVALMQTRATLTGSAVHMRMTRFWGRLYVI 60 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 N+A+G+ TGL MEFQFG W+ +H+ G++ GA LA+E L+AFF+ESTF+GL+ FGWDRL Sbjct: 61 NYAMGIVTGLVMEFQFGLAWNGLTHFAGNVLGASLAMETLVAFFVESTFLGLWIFGWDRL 120 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ V W+V L + SA WI+V+NG++QNP+ ++ + + + ++ NP A Sbjct: 121 NRWAHLGVLWVVTLTAYASAYWIMVSNGFLQNPVGAEV--AGGVLRLTDAAAVLANPAAI 178 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGR-DFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 F H + + F+ G+SA ++ KG + F +RS I + AV++ LG Sbjct: 179 TAFGHILCGALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALG-- 236 Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFG 273 G + Q K+A E A + Sbjct: 237 -GAQFDTAQPMKIAVYAGRTEEVARLQAEMVAA 268 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 76/228 (33%), Gaps = 1/228 (0%) Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 ++ V E+ + L + A+ + + Sbjct: 187 GALLVAGFFVAGVSAHHLRKGTGEQEFFRRSLRIGVFTALPAVMATAALGGAQFDTAQPM 246 Query: 352 GYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIAL-SFWS 410 + R E D IP + + M+ L++A+ L + + Sbjct: 247 KIAVYAGRTEEVARLQAEMVAAHGPGDYIPPAGLVQGSGTAMMIIFALMMAVAWLSALLA 306 Query: 411 VIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGD 470 + + + IPLP+ A+ AGW E GRQPW + +L T A S L+ G Sbjct: 307 LFPRAVHRLRIWHVLLTAMIPLPFAAMLAGWVFREVGRQPWTVYGLLTTEDALSDLSPGA 366 Query: 471 LIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 + FS+ L+ L +V +L+ + AR GP E Sbjct: 367 IRFSLAAFTLLFGLLVVVNTWLLARNARQGPVDTAAAPASAEPLPAPV 414 >UniRef50_Q6L1F8 Cytochrome d ubiquinol oxidase subunit I n=2 Tax=Picrophilus torridus RepID=Q6L1F8_PICTO Length = 482 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 89/496 (17%), Positives = 173/496 (34%), Gaps = 62/496 (12%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVAT 69 FA T H LFV L++ +A + I E + + + Y + K I FA+G A+ Sbjct: 11 AMFAYTISSHILFVTLSMALAITITIAEFLALRKKDKYYDTLAYKLSKGLVIFFAVGTAS 70 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGW-DRLGKVQHMC 128 G M + W + VG + P +E + +F LE+ + ++ + W D + +H Sbjct: 71 GTVMAMELFLFWPNFMKIVGQVSIGPFYVE-VFSFLLEAIALPMYVYFWKDFKNRWEHWA 129 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETM--RMEMVSFSELVLNPVAQVKFVH 186 ++ V +G+ LSA + N WM P + + + ++ V+ P + +H Sbjct: 130 LSLAVTIGTYLSAFTVTEINAWMNTPNGFNVKYYLLHNKIIDVNPLAPFWTPSTFAEELH 189 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFA---FAKRSFAIAASFGMAAVLSVIVLGDESGY 243 + Y G + ILG A+ LK + + +R I A F + ++ + G Sbjct: 190 MSGAVYYAGIVVILGYLAYKYLKTSNMSEKMVYRRGINITAVFAILDIIYLGATGSNELS 249 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 + ++ K AA+E + A +FG+ + + +P A ++A Sbjct: 250 TLLVIEPLKYAALEQDMVPVTYGAPEHIFGVI--INGHPAYYVNLPLAQSLLAY------ 301 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 G L S + +++ +G+G+L+ Sbjct: 302 -------------PFTFGHGYIPGLSSYPSSVWPPSF--VHDTLDLMVGFGILMG----- 341 Query: 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423 I K + + G L + +G +++ Sbjct: 342 -FFWLIVVIMYFMKKDPLSRPLILKLTMAVAVLGVLTMEDG------WYTAEVGRVPFII 394 Query: 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483 +A + G +P + V+ A S+ + + I Y Sbjct: 395 KAPVGGTGIPG------------------VYGVMTIGQAASTSPVVFPLG--IAIIIFYI 434 Query: 484 LFLVAELFLMFKFARL 499 + L + FK +L Sbjct: 435 VLLPLTFYYAFKVMKL 450 >UniRef50_A4WI50 Cytochrome bd ubiquinol oxidase, subunit I n=4 Tax=Archaea RepID=A4WI50_PYRAR Length = 597 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 97/548 (17%), Positives = 178/548 (32%), Gaps = 95/548 (17%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 ++ L R AL +H +++ LT G+ + +M + +G ++Y + + Sbjct: 60 IMPNPNLLRPLSALGVYFHGVYISLTFGLPVAIGVMLWKWWRTGDKVYYRAARLMTAVLA 119 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +NFALG TG +EF W + + PLA+E L+AF E F+ LF R Sbjct: 120 VNFALGAITGTLVEFGLVQIWPGVNLAIATFAFVPLALE-LIAFSNEIAFLILFIVTLGR 178 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN-------------------- 160 + + + A + LS + I N WMQ P Sbjct: 179 VRPPVSIAILAAYAGFAYLSGVLITTVNSWMQAPWGVGPVAKALYPFMPEYGPNVVDVQK 238 Query: 161 ------------------------FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGA 196 ET+ + + + + +P A V H + + + G Sbjct: 239 LVALKLAAVATGSPISLIIEKPGFAETVGIVLKDPNVALYSPYALVSMFHNILAAILIGM 298 Query: 197 MFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAI 256 A+ K + + K +A +F + V+ ++ G + + TK A + Sbjct: 299 AVATAGWAYKYFKTGNEEYLKIVKPLAGAFAVIFVIQAPIVAHFMGEMVVEYNPTKFALM 358 Query: 257 EAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEE 316 E T P + ++A + P++G + Sbjct: 359 EGAVTTFNDP------------------------IIALVAYGDPNKPIVGFDQFEK---- 390 Query: 317 RIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQAT 376 + L + D A ++ + G + L Q Sbjct: 391 ---------ACLSHGNATVGDLAKTLGIPTVLQLAGQTVDLNGIASLKLSDLCLADLQKA 441 Query: 377 KDSIPRVAPLYFAFRIMVACGFLLLAIIALSFW----------SVIRNRIGEKKWLLRAA 426 +P V Y+ G L A++ F+ ++ R E++ + A Sbjct: 442 MSYMPLVHTTYYVKVAFAIIGGLAAAVLLFYFYKVPGLSSLAAAIARILGDERRRVFILA 501 Query: 427 LYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFL 486 L + I GW V E GR+PW + +L + + + S + Y + L Sbjct: 502 LLLVLGTVIPAVGGWAVREIGRKPWTVYGLLYPSEVVTPVP---YATSPGFLAVTYLVIL 558 Query: 487 VAELFLMF 494 L +F Sbjct: 559 AVNLGGLF 566 >UniRef50_C6BZ62 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ62_DESAD Length = 821 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 18/271 (6%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATG 70 A+ A H +G L + E + + D K K F + G TG Sbjct: 17 IAVIATIHVFVAQFAVGGGLFLVVTEKLAYKTESGELLDYVKKHSKFFLLLTMVFGGGTG 76 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + + F + + F A E + F E + ++++ WD++ + H+ + Sbjct: 77 VALWFTMALLSPQGTLVLVREFLFAWATEWVW-FVGEIVALLIYYYYWDKMNRRDHLIIG 135 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 W + + LS I +M P + E SF + + NP A Sbjct: 136 WFYFIFAFLSLFTINGVVSFMLTP--------GVWEETRSFWDAIFNPTFWPALFFRTAL 187 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQK 250 + +F +A + +D + + ++ + G + Q Sbjct: 188 CGMLAGLFGFVTAA----RIKDKDLRCMLVRFCGIWTLTGLVLTVFSGYWYMGSIPAEQI 243 Query: 251 T----KLAAIEAEWETQPAPAAFTLFGIPDQ 277 K + E A LFG Sbjct: 244 MLVVHKSHRVAYFMEVFKYTAPVLLFGGLFM 274 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 84/313 (26%), Gaps = 27/313 (8%) Query: 167 EMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGIS---AWYMLKGRDFAFAKRSFAIA 223 + +F +A + +H + + G L ++ A+ G + K+ Sbjct: 7 HLTTFGGGFW--IAVIATIHVFVAQFAVGGGLFLVVTEKLAYKTESGELLDYVKKHSKFF 64 Query: 224 ASFGMAAVLSVIVLGDE-------SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD 276 M V G + + A E W A + D Sbjct: 65 LLLTMVFGGGTGVALWFTMALLSPQGTLVLVREFLFAWATEWVWFVGEIVALLIYYYYWD 124 Query: 277 QEEETNKFAIQ-IPYALGIIATRSVDTPV-----IGLKE-----LMVQHEERIRNGMKAY 325 + + I + ++ +++ V G+ E + Sbjct: 125 KMNRRDHLIIGWFYFIFAFLSLFTINGVVSFMLTPGVWEETRSFWDAIFNPTFWPALFFR 184 Query: 326 SLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPR--- 382 + L + +G + +T T SIP Sbjct: 185 TALCGMLAGLFGFVTAARIKDKDLRCMLVRFCGIWTLTGLVLTVFSGYWY-MGSIPAEQI 243 Query: 383 VAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWF 442 + ++ + R+ L F + ++ +A+ + + + + F Sbjct: 244 MLVVHKSHRVAYFMEVFKYTAPVLLFGGLFMAICAPRRVNFSSAMVMLVVALMFYGSFEF 303 Query: 443 VAEYGRQPWAIGE 455 + E GR+P+ + Sbjct: 304 MREAGRKPYVVWG 316 >UniRef50_C4DV23 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV23_9ACTO Length = 407 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 95/255 (37%), Positives = 151/255 (59%), Gaps = 5/255 (1%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI----YKDMTKFWGK 57 + V+++RLQFA+T H++FV +TLG+ +L ++T L+ + + MT++WG Sbjct: 1 MTAVDVARLQFAVTTSIHWMFVLVTLGLVVVLVTLQTRAALTRNPVKRALHFRMTRYWGL 60 Query: 58 LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFG 117 ++ IN+++G+A+G+ MEFQFGTNWS SH VGD+FGAPLA+E L+AF ESTF+ L+ FG Sbjct: 61 IYVINYSVGIASGIIMEFQFGTNWSGLSHLVGDVFGAPLAVETLVAFVAESTFLALWIFG 120 Query: 118 WDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 W +L H + WLVA + SA W+LVANG+MQNP + + R + S + L N Sbjct: 121 WGKLPVWIHTLLIWLVAASAYASAFWVLVANGFMQNPTGFELT-DDGRANLTSAAALFNN 179 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P FVH + + G + ++ +SA ++ + ++ F RSF + G+ ++ Sbjct: 180 PSTIWAFVHILGAALTAGGVILVVVSAAHLFRRKEKDFFTRSFRLGYLMGLFGMIWAFGT 239 Query: 238 GDESGYEMGDVQKTK 252 G + +Q K Sbjct: 240 GWAQYGFVNQIQPAK 254 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 63/179 (35%), Gaps = 2/179 (1%) Query: 345 NSMKKDLGYGLLLKRYTPNVADATEAQIQQA-TKDSIPRVAPLYFAFRIMVACGFLLLAI 403 S + GL + A + Q + + + AF IM+ L I Sbjct: 220 RSFRLGYLMGLFGMIWAFGTGWAQYGFVNQIQPAKELGKGLGVEPAFHIMMLTAELATPI 279 Query: 404 IALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVAN 463 + L VI + + + +P P+ A AGW E GRQPW + V T A Sbjct: 280 MLLLSPIVIWKLPAKLWFFMPLFWLALPFPFAAAIAGWVFREMGRQPWIVYGVQKTEDAV 339 Query: 464 SSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG-RYHFEQSSTTTQPA 521 S + L S L L L L+ +L+ + A GP+ G PA Sbjct: 340 SDIGVTTLWTSFWLFTVLLGLLLLTNWWLITRHAVRGPNREIFGIEPDAGYGKPAAAPA 398 >UniRef50_C1YQX6 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX6_NOCDA Length = 422 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 89/253 (35%), Positives = 132/253 (52%), Gaps = 3/253 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 + D + L+RLQFALTA H++FV LTLG+A L + V L G + +FWG L+ Sbjct: 2 LEDPLLLARLQFALTAATHYMFVALTLGLAPYLLATQLVAALRGDRSRTTAVRFWGGLYL 61 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +N+ +GV +GL ME Q NWS G F APLA+E + AFF+ESTF+GL+ FGWDR Sbjct: 62 VNYGMGVLSGLVMELQLALNWSGLHGMFGYTFAAPLALETMTAFFVESTFLGLWIFGWDR 121 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180 +G+ H+ +V + SA W+LV+NG+++NP+ F + L+ NP A Sbjct: 122 MGRWAHLACFAVVTATAYASAWWVLVSNGFLRNPVG--FEMVDGVAHLTDPVALMTNPAA 179 Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAF-AKRSFAIAASFGMAAVLSVIVLGD 239 + F H V + GA+ + SA+++++ D +R A + V G Sbjct: 180 VLAFGHIVTGSLLVGALVVAATSAYHLVRRDDAHGVFRRGIRHATLVLCVVPIPVAAFGG 239 Query: 240 ESGYEMGDVQKTK 252 G T Sbjct: 240 VQFGLFGQDPPTS 252 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 48/130 (36%) Query: 392 IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPW 451 +M+ L+ + L + + +W L + LP++A GW E RQPW Sbjct: 284 VMMTSWALVFLLGPLMLLAWPLGGLDRWRWFLAPLVVTPFLPYLASVGGWVFRETNRQPW 343 Query: 452 AIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHF 511 + L TA A + L+ + S + +L+ ++AR GP Sbjct: 344 TVVHHLTTADAVTPLSPVAAVASFGFFTAAFAALAAVTYWLLVRYARRGPEGGPLAEQRT 403 Query: 512 EQSSTTTQPA 521 + +P Sbjct: 404 QPPEGPAEPG 413 >UniRef50_Q47RW3 Highly similar to cytochrome D ubiquinol oxidase subunit I n=1 Tax=Thermobifida fusca YX RepID=Q47RW3_THEFY Length = 412 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 2/250 (0%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 D + +RLQFALT+ H++FV TLGMA L+ + + +L + +FWG L+ +N Sbjct: 4 DPLLWARLQFALTSGVHYMFVAFTLGMAPLILVAQGSALLRRDEARLAAVRFWGGLYVVN 63 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + +GV +GL ME Q NWS + G +F APLA+E + AFF ESTF+GL+ FGWDR+ Sbjct: 64 YGMGVLSGLVMELQLALNWSGLNDVFGHVFSAPLAVETVAAFFTESTFLGLWIFGWDRMN 123 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 + H+ +V L + LSA W+LVANG+++NP+ F + LV NP A + Sbjct: 124 RWLHLACFGVVTLTAYLSAFWVLVANGFLKNPVG--FALRDGVAVLTDPVALVTNPAALL 181 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 F H S + G + + G+SA+++ +G D R + L + Sbjct: 182 AFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFPTPAAGGAQ 241 Query: 243 YEMGDVQKTK 252 Y + T Sbjct: 242 YSLAGAPPTS 251 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 84/234 (35%), Gaps = 5/234 (2%) Query: 286 IQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFN 345 + P AL A + ++G + +R G + + A F Sbjct: 174 VTNPAALLAFAHVATSALLVGGLVMAGVSAYHLRRGNDPDGMFRRGVRRGVVVASLALFP 233 Query: 346 ---SMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLA 402 + ++ A A+I+ A +S +A + +M C + Sbjct: 234 TPAAGGAQYSLAGAPPTSGLTLSSAEIAEIEAARPESTMVLAEVGNG--VMTLCWTVFFL 291 Query: 403 IIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA 462 ++ ++ + + R+ +WL L +A AGW E GRQPWA+ + TA A Sbjct: 292 VLPVALLAWLVRRLDRWRWLHWLLSVMPVLALLAGVAGWLYRELGRQPWAVWHHMTTAEA 351 Query: 463 NSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516 + L+ + S V+ G + + +L+ ++AR GP + Sbjct: 352 ITPLSVPHAVASFVVFTGAFAVLAGITWWLLVRYARRGPHGGPLAPAPSGDDAP 405 >UniRef50_A9I8C6 Putative transmembrane cytochrome oxidase n=5 Tax=Bordetella RepID=A9I8C6_BORPD Length = 447 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 4/368 (1%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63 + L+R+QF + + LF+ L L +++LL + +G + +FW + F ++F Sbjct: 5 PLLLARIQFTASLSFLALFMALALALSWLLLFFKLRAHRTGLPGWTAAYRFWVRFFALSF 64 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 L +A L + Q G+ W +G++ G + L F L+S F+G+ FG R+ + Sbjct: 65 VLTLAAALPVLIQVGSLWPGLMDKIGNVAGPLIGFGVLSVFILKSCFLGVMLFGQRRVSE 124 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183 H ++VA+G ++ W+L W+Q P + R ++ + V NP Sbjct: 125 RVHTLAVFMVAVGQAVALFWVLALQSWVQTPAGA--TLIDARYQVYDWYAAVFNPSLGWN 182 Query: 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243 T + A ILG++A L+ + +F A +AA L + D +G Sbjct: 183 LGLTALWSALAAAFLILGVTALQALRRPLDDGERCAFKTALVVAVAASLLQAPVLDGAGR 242 Query: 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303 M + Q K AA W + P +TLFG PD + N+ A+ +P A G R Sbjct: 243 VMAEHQPAKAAAAAGYWHSGAEPG-WTLFGWPDARAQANRAALALPGAGGAWLGRDAQGV 301 Query: 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363 GL + + A + L + + + ++ L L + Sbjct: 302 YQGLDKFSGM-RPPVALTFWALRVALLLGAAMLLVSCVTLALTARRGLDPAQLPAWWLRV 360 Query: 364 VADATEAQ 371 + A Sbjct: 361 IVGMLYAG 368 Score = 44.7 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 4/208 (1%) Query: 303 PVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTP 362 + G +M +H+ Y + + + + L + Sbjct: 236 VLDGAGRVMAEHQPAKAAAAAGYWHSGAEPGWTLFGWPDARAQANRAALALPGAGGAWLG 295 Query: 363 NVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK-- 420 A + + P VA ++A R+ + G +L + ++ R + + Sbjct: 296 RDAQGVYQGLDKF-SGMRPPVALTFWALRVALLLGAAMLLVSCVTLALTARRGLDPAQLP 354 Query: 421 -WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLIC 479 W LR + + + V AG + G QP+A+ + + L S+ Sbjct: 355 AWWLRVIVGMLYAGGLTVLAGGVFSLVGMQPYAVNAAITQTEVLGVTSTPTLAASLAGYL 414 Query: 480 GLYTLFLVAELFLMFKFARLGPSSLKTG 507 LY L L A ++F AR G ++ Sbjct: 415 VLYGLLLAAFNGMLFHAARYGVVPVRKP 442 >UniRef50_C7LSV8 Cytochrome c class I n=2 Tax=Desulfovibrionales RepID=C7LSV8_DESBD Length = 881 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 100/295 (33%), Gaps = 21/295 (7%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG-INFALGVA 68 L AL A++H +G L + E + D TK K F + LG Sbjct: 15 LLIALIAVFHVYIAHFAVGGGLFLVLTEHLGYRRQSPAILDYTKRHTKFFLLVTMVLGGI 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F AIE + F E + ++F+ + ++G+ H+ Sbjct: 75 TGVGIWFIISLVAPAATSQLIHTFVFAWAIEWVF-FLCEIVSLFIYFYTFGKMGRRNHLT 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 + WL +S I G+M P +E F + + NP Sbjct: 134 MGWLYFFFGWMSLFMINGIIGFMLTP--------GDWLETKDFWDGLFNPSFWPALAFRT 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDV 248 + ++ + W +D + A++ +A +++ G + + + Sbjct: 186 FIALILAGLYGFVTATW----EKDPKTRETLVRYCATWLLAPFAFLLLSGWWYVHVLPEG 241 Query: 249 QKTKLAAIEAEWETQPAPAAFT-----LFGIPDQEEETNKFAIQIPYALGIIATR 298 + + A E P F LF AI+ P AL ++ Sbjct: 242 P--QAMVLGANPEIAPYLQGFLWISVVLFAGGLIMAVRMPAAIKRPMALVLLVIG 294 >UniRef50_C8X0C6 Cytochrome c family protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C6_DESRD Length = 897 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 14/237 (5%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATG 70 AL A+ H +G L + E + + T+ K F + G TG Sbjct: 17 IALMAIVHVFVAHFAVGGGLFLVLTERKAYRENSKSILEYTRKHAKFFLLLTMVFGGLTG 76 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + + F + + F A E + F +E + ++F+ + ++ + +H+ V Sbjct: 77 VGIWFTISVLSPGATSVLIHNFLYGWATEWVF-FVVEIVALFVYFYTFGKMDQQRHLTVG 135 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 W+ + S I +M P ++ +F NP V Sbjct: 136 WIYFGAAWASLFLINGIIAFMLTPGEW--------LQTGNFWHGFFNPTFWSSLVFRTFM 187 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 V +F + + +D + A + + ++ ++ G + + Sbjct: 188 AIVLAGVFGFVTATFM----KDQQARAQLIRYNARWLLVPMVFLVASGWWYLQSVPE 240 Score = 41.6 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 75/330 (22%), Gaps = 35/330 (10%) Query: 151 MQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG 210 M P+ F P+A + VH + + G L ++ + Sbjct: 1 MNYPVWELFAAGGGL------------PIALMAIVHVFVAHFAVGGGLFLVLTERKAYRE 48 Query: 211 RDF---AFAKRSFAIAASFGMAAVLSVIVLGDES-------GYEMGDVQKTKLAAIEAEW 260 + ++ M V + + A E + Sbjct: 49 NSKSILEYTRKHAKFFLLLTMVFGGLTGVGIWFTISVLSPGATSVLIHNFLYGWATEWVF 108 Query: 261 ETQPAPAAF---TLFGIPDQEEETNKFAIQIPY-ALGIIATRSVDTPV--IGLKELMVQH 314 A F FG DQ+ I + + + G Sbjct: 109 FVVEIVALFVYFYTFGKMDQQRHLTVGWIYFGAAWASLFLINGIIAFMLTPGEWLQTGNF 168 Query: 315 EERIRNGM----KAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEA 370 N + + V F ++ + V Sbjct: 169 WHGFFNPTFWSSLVFRTFMAIVLAGVFGFVTATFMKDQQARAQLIRYNARWLLVPMVFLV 228 Query: 371 QIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK---KWLLRAAL 427 S+P A R + + + + + +W A Sbjct: 229 ASGWWYLQSVPEPARELILDRSPELVPYFKAFLWLSGAVFLGGLLLTARGGRRWQRPLAF 288 Query: 428 YGIPLPWIAVEAGWFVAEYGRQPWAIGEVL 457 + L + + ++ E GR P+ I + + Sbjct: 289 VLMALALGYMGSFEYIREAGRHPYLIYDYM 318 >UniRef50_D1UBB8 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB8_9DELT Length = 837 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 14/244 (5%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATG 70 AL A H +G L + E SG + K K F + A G +G Sbjct: 17 IALIATVHVYVAHFAVGGGLFLILTERAAYRSGNPHLLEYAKKHTKFFLLLTMAFGAVSG 76 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + + F + + F A E + F E + ++++ W+ + + H+ V Sbjct: 77 VAIWFTIALLAPQATITLIHNFVFAWAAEWVC-FTGEIVALIIYYYTWETMNRRDHLMVG 135 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 L + S I G+M P ++ F + + NP V Sbjct: 136 TLYFIFGWFSLFLINGIVGFMLTPGEW--------LQTRDFWDGIFNPTFWSSLVFRSFF 187 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQK 250 +F S + D A + +++ +A VL+V+ G ++ Q Sbjct: 188 SAACAGLF----SFVTATRISDEATRTQVLRTCSAWTIAGVLAVVATGFWYMADLPPAQY 243 Query: 251 TKLA 254 +A Sbjct: 244 ELVA 247 Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 66/302 (21%), Gaps = 29/302 (9%) Query: 180 AQVKFVHTVASGYVTGAMFILGI---SAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 A + VH + + G L + +A+ +AK+ MA V Sbjct: 18 ALIATVHVYVAHFAVGGGLFLILTERAAYRSGNPHLLEYAKKHTKFFLLLTMAFGAVSGV 77 Query: 237 LGDE-------SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQ-- 287 A E T A + + + + Sbjct: 78 AIWFTIALLAPQATITLIHNFVFAWAAEWVCFTGEIVALIIYYYTWETMNRRDHLMVGTL 137 Query: 288 --IPYALGIIATRSVDTPV--IGLKELMVQHE-----ERIRNGMKAYSLLEQLRSGSTDQ 338 I + + + G + + S +G Sbjct: 138 YFIFGWFSLFLINGIVGFMLTPGEWLQTRDFWDGIFNPTFWSSLVFRSFFSAACAGLFSF 197 Query: 339 AVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPL-----YFAFRIM 393 + + +T A A D P L + M Sbjct: 198 VTATRISDEATRTQVLRTCSAWTIAGVLAVVATGFWYMADLPPAQYELVALKSHRVAGFM 257 Query: 394 VACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 + +R L L + + E F+ E GR+P+ I Sbjct: 258 RWFWIFAGLTLMGGLILALRLPRLMTFPLALIVLLAGQGLFGSFE---FIREAGRKPYLI 314 Query: 454 GE 455 + Sbjct: 315 WD 316 >UniRef50_B5YHW0 Cytochrome c family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHW0_THEYD Length = 883 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 79/238 (33%), Gaps = 14/238 (5%) Query: 11 QFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVAT 69 A+ A++H +G L + + V G + + F + G T Sbjct: 16 LVAIIAVFHVFISHFAVGGGIFLWLTDLKSVREGNISLRQYVRKHVWFFLLLTMVFGGVT 75 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCV 129 G+ + F + + + + F AIE + F +E + ++ + ++ L + + Sbjct: 76 GVGIWFIIALSSPWATSLLIHTFVFAWAIEWVF-FIVEIVSLLIYHYKFETLSDKNRLRI 134 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVA 189 ++ A + LS I +M P + SF + NP V A Sbjct: 135 AFIYAASAWLSLFVINGIITFMLTPGQW--------LRTHSFWDGFFNPTNLPGLVFRTA 186 Query: 190 SGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + +F + + ++ + + + +I+ G Y + + Sbjct: 187 ICIMFAGLFGFVTAVF----EKEDKLRQEFLRYCVKWLYIPLPFLIISGLWYFYSIPE 240 >UniRef50_Q316Q4 Cytochrome bd-type quinol oxidase subunit 1-like n=2 Tax=Desulfovibrio RepID=Q316Q4_DESDG Length = 841 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 16/267 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN-FALGVA 68 L A+ A+ H +G F L + E V D + + F + G Sbjct: 15 LVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGL 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F A E F E + ++ + +D + + H+ Sbjct: 75 TGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAF-FLGEIAALLVYHYYFDSMPRKAHIK 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V W+ A + +S + I M P + F + N Sbjct: 134 VGWVYAFFAFMSLVVINGIITVMLTP--------GKWAQTHLFWDGFFNVSFWPSLSLRF 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDV 248 A + +F + ++ +R AA + + + G + D Sbjct: 186 ALCLMFAGLFAFVTA----IRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD- 240 Query: 249 QKTKLAAIEAEWETQPAPAAFTLFGIP 275 + +E +T AF GI Sbjct: 241 -PQQSMVMERSTQTPHLVQAFIPLGIV 266 >UniRef50_Q1K0H2 Cytochrome bd-type quinol oxidase subunit 1-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H2_DESAC Length = 655 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 14/247 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF-GINFALGVA 68 L A+ A+ H +G L + E + K K F + G Sbjct: 15 LLIAIMAVTHVFVSHFAVGGGLYLVMTEHKARRENDDQLLEFVKKHAKFFMLLTMVFGGV 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F G + + F A E + F +E + ++++ +D + + H+ Sbjct: 75 TGVGIWFTIGLIQPDATSKLIHTFVFGWAAEWVW-FLVEIIALIIYYYKFDSMDERTHLK 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V W+ + LS I G+M P F NP Sbjct: 134 VGWIYFAAAWLSLFLINGIIGFMLTPGEWV--------NNHQFFSGFFNPTFWPSLWFRF 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDV 248 A + +F +A+ AF + ++ + + +++ VI G + Sbjct: 186 AISTLLAGVFAFFTTAF----IDVEAFRLKMTRYSSLWCLLSLVVVIPTGYWYLQVLPSG 241 Query: 249 QKTKLAA 255 + L+A Sbjct: 242 PQEILSA 248 >UniRef50_D2L7F9 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F9_9DELT Length = 880 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 14/231 (6%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATG 70 AL A+ H +G L + E +G + F + G +G Sbjct: 17 IALIAVLHVFVAHFAVGGGLFLVLTEAKARKAGSAPIMAYLHRHTRFFLLLTMVFGALSG 76 Query: 71 LTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVT 130 + + F + + F A E F E + ++++G+DRL +H V Sbjct: 77 VGIWFTISVLSPQATLVLIRTFVWGWATEWTF-FAGEIAALLVYYYGFDRLEPARHQLVG 135 Query: 131 WLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 + L + LS + G+M P F + + NP V A Sbjct: 136 FFYFLFAWLSLFTVNGIIGFMLTPGQWPVTL--------DFWDGLFNPTFLPSLVLRTAM 187 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + +F G + L RD + A + + A +++ G Sbjct: 188 ALLLAGLFGFGTA----LGIRDEEARETMLRAACRWVVYAAPVLLLSGWWY 234 >UniRef50_B3EB84 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3EB84_GEOLS Length = 585 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 75/239 (31%), Gaps = 14/239 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF-GINFALGVA 68 L AL A+ H +G L + E + Q D K K F + G Sbjct: 15 LLIALVAIVHVFVSHFAVGGGLYLVLAERKAIKEKSQAIMDFVKKHTKFFMLLTMVFGGL 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F A E + F +E + ++F+ + ++ H Sbjct: 75 TGVAIWFVISLIHPAATSLLIHTFVFGWAAEWVF-FLVEIVALFVYFYAFGKMDDRTHQT 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 + W+ + +S I +M P + +F NP Sbjct: 134 IGWIYFGAAWMSLFLINGIIDFMLTP--------GSWISTSNFWSGFFNPTFWPSLFFRS 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 ++ + + + +D R + + + +++ + G + D Sbjct: 186 FMSFMLAGCYGFLTATFL----KDEEARHRMIRYSGVWALVSLILSVPAGWWYISVLPD 240 >UniRef50_C4XLC6 Cytochrome c family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XLC6_DESMR Length = 877 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 78/235 (33%), Gaps = 14/235 (5%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVATGLT 72 L A+ H +G L + E + +G + + F + G +G+ Sbjct: 19 LIAVLHVYVAHFAVGGGLFLVLTEAMARRTGSRPLLTYLHRHTRFFLLLTMVFGGLSGVG 78 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWL 132 + + + F A E F E + ++++G+DRL +HM V WL Sbjct: 79 IWLTISLLSPQATLILVRSFAWGWAAEWAF-FAGEIGALLIYYYGYDRLDPKRHMLVGWL 137 Query: 133 VALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGY 192 + LS I G+M P F + NP V A G Sbjct: 138 YFAFAFLSLFTINGIIGFMLTP--------GDWPATRDFWDGFFNPTFWPSLVLRFALGL 189 Query: 193 VTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + +F + L D + ++ + +AA ++V G + + Sbjct: 190 MLAGLFGFATA----LGIGDEEARETMLRASSRWAVAAAPVLLVSGWWYVDVLPE 240 >UniRef50_Q82LT7 Putative cytochrome bd-I oxidase subunit I (Cytochrome bd complex) n=1 Tax=Streptomyces avermitilis RepID=Q82LT7_STRAW Length = 344 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 108/352 (30%), Gaps = 64/352 (18%) Query: 145 LVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISA 204 + AN WM P + V V P+ ++ H V +T + G+ A Sbjct: 1 MAANAWMNTPRGFTLDAS-GNPVNVDVRRAVFTPMLGPEYWHFVVGVILTAGYVVAGVYA 59 Query: 205 WYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQP 264 +L GR + + F + S +LGD + Q K AA E W+T Sbjct: 60 VGLLWGRRDRYHRLGFTVPFSVAAILTPVQFILGDSIARSVFHKQPVKFAATEIVWKTGT 119 Query: 265 APAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKA 324 +FG + + I+IP I+A SV+T V GL + A Sbjct: 120 -HMPEYMFGRLRSD-GSISGGIKIPQLDSILAGFSVNTKVTGLSSVPASDRPTATQATIA 177 Query: 325 YSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVA 384 + + G LL V A +PR Sbjct: 178 -------------------HWAFDIMVTIGSLL------VLLALWYGWCWLRHRGLPRSP 212 Query: 385 PLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVA 444 + R A + VE GW Sbjct: 213 WFF------------------------------------RCAAVAGAACLLTVECGWITT 236 Query: 445 EYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKF 496 E GRQPW + + + + A + A L + ++ +Y L L A L ++ K Sbjct: 237 EVGRQPWIVYQNMRVSEAVTDTRASSLWAMLGIVVVVYVLVLGAFLAVLLKM 288 >UniRef50_A8MAD1 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD1_CALMQ Length = 417 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 57/415 (13%), Positives = 129/415 (31%), Gaps = 5/415 (1%) Query: 1 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60 M+ V + A H V LG+ +LL +E + SG++ Y D+ Sbjct: 1 MVSPVVATVALIAWAFSVHLPLVYTVLGLGWLLPTLELLGYRSGRRTYIDIAHGLSSYLI 60 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 +A+G G + +++ G + I + + +G ++ ++R Sbjct: 61 AVYAIGGVFGTIVTVFLAGLLPVFTNIAGALLWPVWGIAIVFGVAIALPLIGFYYRSFNR 120 Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNF----ETMRMEMVSFSELVL 176 L ++H+ V + +A+ + + + ++ P T V+ +E + Sbjct: 121 LSPMRHVAVGYGMAITLTVIPVMFRLVFAFINYPAGVAIAPSSTSNTGFTLSVNLTEALS 180 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIV 236 NP + T+ ++ + I W R + + I + G+ + + Sbjct: 181 NPTYPPLLLATLFGAIAMTSILVSSIHGWRYASSR-SEYHELGHRIGNTVGLIFGILYSI 239 Query: 237 LGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIA 296 Y + T +I + A + L+ I + + I+ Sbjct: 240 FAAWYLYTVYQYSPTVAWSIFGHPPSYLPSAFYGLYKPTFNLSWMLYMNIALGAVILILL 299 Query: 297 TRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLL 356 S+ ++ L + + + + + L + + L + L Sbjct: 300 VVSIKVTSKPIEVLKLILTPMLMDSAEVMNGLAHVPYAIVPPVAAAEALIKAYGLSFALN 359 Query: 357 LKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSV 411 + ++ T + S+ L LL I A W Sbjct: 360 VAKWLTISQLLTPQINALLSLVSVQPGLLLGSLVFFAFFNALLLYVIYAALSWRR 414 >UniRef50_B9P917 Predicted protein n=7 Tax=cellular organisms RepID=B9P917_POPTR Length = 462 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 4/210 (1%) Query: 292 LGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQL----RSGSTDQAVRDQFNSM 347 +G+I TRS+ + + G+ +L+ + E+ IRNG++AY LE + +G + F Sbjct: 1 MGLIGTRSLTSEIPGINDLVQRTEQYIRNGIEAYGALEAIRAAGPTGQVPAEAKAVFEDK 60 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALS 407 LGY LLLKRY + AT+AQI QA D++P V PL++AFRIMV G +A+ A Sbjct: 61 GGQLGYALLLKRYVDDPRQATDAQIAQAAWDTVPAVGPLFWAFRIMVGLGMFFIALTAAF 120 Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLT 467 FW +R R+ W+L+ A+ IPLPWIA E GW VAE GRQPW I VLPTA+A S+L Sbjct: 121 FWLSVRRRLDTHPWMLKLAVIAIPLPWIAAECGWIVAEVGRQPWIIEGVLPTALAVSNLG 180 Query: 468 AGDLIFSMVLICGLYTLFLVAELFLMFKFA 497 AG L+ ++ +Y++ V E+ LM Sbjct: 181 AGTLLLTIAGFIAIYSVLFVIEMKLMIVTM 210 >UniRef50_Q3A1E9 Cytochrome c family protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1E9_PELCD Length = 430 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 78/237 (32%), Gaps = 14/237 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF-ALGVA 68 A A+ H +G F L ++ET + Q T+ + +LF + G Sbjct: 15 AMIAAIAVSHVFISHFAVGGGFWLVLLETRALRHRDQPLYRFTQSFARLFVLTTLIFGAL 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG+ + F + + F A E ++ F +E + ++ + L +H+ Sbjct: 75 TGVGIWFAISLVQPAGTSALIHRFVFIWAAEWVL-FLVEVVAITVYLHSFGHLAPRRHLI 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V + S LS I +M P + + R NP Sbjct: 134 VGRVYCAASWLSLFAINGIITFMLTPGMASQHSGLPR--------AFFNPSFWPSLALRT 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 + +F+ +A+ D A R + A + + A+ + G + Sbjct: 186 CLAGLISGLFVAIFAAFL----ADRDLASRLIRMTAGWSLLALCGALPAGLWYLQSL 238 >UniRef50_A8MAD2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAD2_CALMQ Length = 474 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 107/333 (32%), Gaps = 38/333 (11%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 ++ +R A+ + H LG + I E +Y++ + + D + + + I Sbjct: 13 STLDAARWVSAIGILAHLSLASSFLGTILIAVIAEYLYLVKHDKDWYDKARMFSVVSTIF 72 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL- 121 F +G A G +EF T WS + +G P +E L AF E + L+ F W ++ Sbjct: 73 FGVGAAFGTLVEFGLVTIWSNFITIIGSAIVLPFYLE-LFAFLTEVILLPLYVFTWGKVR 131 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWM---------QNPIASDFNFETMRMEMVSFS 172 H + A G SA IL + QN AS+ + +V+++ Sbjct: 132 NGWVHWVIGLAAAFGGYWSAYNILAVMASLSMRPPGMIIQNLAASNETIAGLTSYLVTWA 191 Query: 173 EL--VLNPVAQVK---FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFG 227 + N H + + + + I + ++ AK I Sbjct: 192 KPTDAWNMFWWGANVFIFHGILAAAILTWSVVGAIYLYGYVREHRPDQAKVLKVIIPGVA 251 Query: 228 MAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQ 287 + + +LG + G + KLAAIE + Sbjct: 252 VMTAIEGFILGHDQGELVLQFDPLKLAAIEGMFWKGLKVDPL------------------ 293 Query: 288 IPYALGIIATRSVDTPVIGLKELMVQHEERIRN 320 L A + + G + Sbjct: 294 ----LSFFAYGTFNHAFWGYYSWPANVRPPLAP 322 >UniRef50_C2K9G3 Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Staphylococcus aureus subsp. aureus MN8 RepID=C2K9G3_STAAU Length = 304 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 127/369 (34%), Gaps = 71/369 (19%) Query: 151 MQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG 210 M P F + +M V E + NP V+ H + + +T A I I+A+ +L+ Sbjct: 1 MNTPAG--FELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRN 58 Query: 211 R---DFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPA 267 R D + K++ ++ G + L ++ GD S + Q KLAA E ++T + A Sbjct: 59 RQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDT-SSHA 117 Query: 268 AFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSL 327 LFG+ D++ + K AI++P L +A SV T V GL + + Sbjct: 118 KLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMI-------- 169 Query: 328 LEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLY 387 + G+L + + + + Sbjct: 170 ---------------VHYFFDLMVTMGILCFVISGVYVLTLMFKKLR-------NFSTHK 207 Query: 388 FAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYG 447 + ++ G + I ++ R + W++R Sbjct: 208 WMLYGILLTGPASMLAIEFGWFLTEMGR---QPWIVR----------------------- 241 Query: 448 RQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG 507 + A A + AG + F +L LYT+ + +++ + + P+ Sbjct: 242 -------GYMRVAEAAT--QAGGITFVTILFGILYTILMYTCAYVLIRMFKNKPAYEDVN 292 Query: 508 RYHFEQSST 516 R +Q Sbjct: 293 RLAKKQGGE 301 >UniRef50_Q1PZE5 Similar to subunit 1 of alternative cytochrome bd quinol oxidase (CydA) n=2 Tax=Bacteria RepID=Q1PZE5_9BACT Length = 699 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 13/259 (5%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR+ + + H +F LG+ I+E V SG Y M K + KL FA Sbjct: 97 SRVVVWIVSELHLMFAAFVLGVPIFAVIVEIVGFKSGDIKYDKMAKEFTKLLSAAFATTA 156 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL-----G 122 + G + F + + ++ +F + + LM FF E+ + +++ WD L Sbjct: 157 SLGGLLAFCLFGLYPEFMSHLTSVFAPTMYVYSLM-FFGEAFTLYGYYYSWDVLKGTSTK 215 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ + ++ L +M +P + +T R ++S E N + Sbjct: 216 KWCHIALGIMLNLFGTGLMFITNSWATYMMSPSG--VSMKTGR--LLSLYEAFYNELWMP 271 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLK---GRDFAFAKRSFAIAASFGMAAVLSVIVLGD 239 +H + + G + +A L + A + G+ A++ + G Sbjct: 272 VNLHRLIANVCFGGFVVGAYAAVKFLNSKTKEERAHYDWMGYVGNFIGIGALIPLPFAGY 331 Query: 240 ESGYEMGDVQKTKLAAIEA 258 G E+ + Sbjct: 332 WLGREVYSASPVMGNIMMG 350 >UniRef50_B3SF07 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SF07_TRIAD Length = 262 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Query: 36 METVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAP 95 ME +++ + +IY + KFW K+F + F +GV TG+ M FQFGTN+ +S G + G Sbjct: 1 MEIMWLKTNNKIYLSLYKFWVKIFALAFGMGVVTGIPMSFQFGTNFGKFSELAGSVIGPL 60 Query: 96 LAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI 155 + +E + AFFLE+ F+G+ FGW R H+ T LV LG++ SA WIL N WM P Sbjct: 61 IGVEVMTAFFLEAAFIGVMIFGWKRFSAKVHLIATILVVLGTHHSAFWILSLNSWMHTPD 120 Query: 156 ASDFNFETMRMEMVSFSEL 174 + + + + ++ Sbjct: 121 G--ISVIDGSIRIHDWLKI 137 >UniRef50_A1VBG6 Cytochrome c family protein n=3 Tax=Desulfovibrio vulgaris RepID=A1VBG6_DESVV Length = 430 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 84/266 (31%), Gaps = 14/266 (5%) Query: 10 LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-NFALGVA 68 L A+ ++ H +G FLL T +G K + + F + + G Sbjct: 15 LLVAIISVLHVFVAQFAVGGGFLLVHAATRAERAGSAEATFWVKRFTRFFLLLSMVFGGV 74 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 +G+ + + + F A E + F E + ++++G+ ++ H Sbjct: 75 SGVGIWVIISLISPAATSLLVHRFVYAWATEWVF-FLGEIVALLVYYYGFGKMRFEDHRN 133 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTV 188 V L L + LS I +M P A M+ F + NP + Sbjct: 134 VGLLYGLFAYLSLFMINGIITFMLTPGAW--------MQTQGFWDGFFNPTFWPSLLFRS 185 Query: 189 ASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDV 248 A + +F L ++ D + + + + + + V + Sbjct: 186 ALCAMLSGLFGLVWASL----IDDERARELMTGVTRLWALVPIPFMAVGAWWYIGALPAP 241 Query: 249 QKTKLAAIEAEWETQPAPAAFTLFGI 274 Q + A+ + L + Sbjct: 242 QLEMVLRRTADIRPFLEAFPWVLAAL 267 >UniRef50_C7PGU9 Putative cytochrome n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU9_CHIPD Length = 499 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 87/241 (36%), Gaps = 24/241 (9%) Query: 9 RLQFALTAMYHFLFVP-LTLGMAFLLAIMETVYVLSG------KQIYKDMTKFWGKL-FG 60 R A+ A+ H + L +G L+ +E V + + + K+ F Sbjct: 14 RFLIAMIAIIHVIINHGLAVGFIPLVTWLEQKGVKNSHAMEITDLSWDKLAWKMMKVGFI 73 Query: 61 INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120 I LG TG+ + F + +F E ++ F E + ++F W+ Sbjct: 74 ITTTLGAMTGVGIWFSVALVSPASIGSLIRVFYWAWFTEWIV-FVTEVVLILIYFLSWEN 132 Query: 121 LGKVQ-----HMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV 175 K H+ W +++ S ++ + I+ G+M +P + + S Sbjct: 133 ANKSLTSKLRHIRFGWFLSIFSWITMVIIVSILGFMMDPGNWNTH--------HSLLNGF 184 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 NP+ + + + V G +F G+ + + KR+ A+++ + + Sbjct: 185 TNPIYIPQLLFRTPTAMVVGGVF--GLMLITLFTENGTSIRKRAIRSASAWILCWAPLSL 242 Query: 236 V 236 Sbjct: 243 A 243 >UniRef50_A8EVK9 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK9_ARCB4 Length = 466 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 104/339 (30%), Gaps = 15/339 (4%) Query: 4 IVELSRLQFALTAMYHFLFVPLT-LGMAFLLAIMETVYVLSGK-QIYKDMTKFWGKLFGI 61 R+ A+ A+ H +G + +LA + Q Y + K F I Sbjct: 12 PFIGQRMLMAINAIIHVFVSHGGAVGGSVVLAALAWWANKKNDMQAYNLIYKVVMVFFII 71 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR- 120 + ++G TG+ M + +F IE ++ F E + L F W + Sbjct: 72 STSVGALTGVGMWIHANILSPNAIGGLIRVFFWKWFIEWIV-FNFEVVLLLLLFMTWKKN 130 Query: 121 ----LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPI--ASDFNFETMRMEMVSFSEL 174 G+ + + A+ S L+ + I +M P + + V ++ Sbjct: 131 QQTPEGRAKTVRFGVYYAISSWLTMVIITAILAFMLTPNFDGQPWVDPEVYPGNVDYNNA 190 Query: 175 VLNPVAQVKFVHTVASGYVTGAMFIL---GISAWYMLKGRDFAFAKRSFAIAASFGMAAV 231 + NP + A + I A + D R A+ + V Sbjct: 191 LFNPTWWPSLAFRTFTSIAFAAALAIMWTWIIATFSKNEEDKEAKARLIKFLAAIMLITV 250 Query: 232 LSVIVLGDESGYEM--GDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIP 289 + G E+ + A + +E + G+ T A P Sbjct: 251 PISAIFGYWYYTEIPAAALSMIPTAVMTRAFEDRFDLMYLMAIGVGGSIIVTTIIAYFSP 310 Query: 290 YALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLL 328 + +A + + L + E IR Y+ + Sbjct: 311 KRMPYLAASLMVAGFLVLWGYEERVREFIRKPFLIYNYM 349 >UniRef50_B8GME3 Cytochrome c class I n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME3_THISH Length = 473 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 80/247 (32%), Gaps = 12/247 (4%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 + S L A H LF ++G A A + T+ + K +G + Sbjct: 12 EPTIGSGWVVGLIATIHVLFSHTSVGAAIFFAFLATIAYRRNQPELLTFIKKYGLFLLVF 71 Query: 63 -FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 + G TG+ + + + F A E + F +E V + + ++ Sbjct: 72 AYVAGSITGVGIWYSTTVASPRGISALIHSFVWKWATEWVF-FVIEVVGVYMVVYLVGKV 130 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 + H+ +TW+ AL S + L I+ +M P + E + Sbjct: 131 DQRTHLRITWIFALASYATMLIIIGILSFMLWPGKEAWFAEGG------YLNGFYGSNTF 184 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 + ++ T + GI A + D + A G+ + ++ L Sbjct: 185 AQLA-MRSAFMFTMTAVVGGIVASRL---TDLDLRREIIRKLAWLGIVSTITGTALFSWY 240 Query: 242 GYEMGDV 248 + + Sbjct: 241 TSTLPEH 247 >UniRef50_B2V8T0 Putative uncharacterized protein n=2 Tax=Sulfurihydrogenibium RepID=B2V8T0_SULSY Length = 455 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 90/254 (35%), Gaps = 19/254 (7%) Query: 4 IVELSRLQFALTAMYHFLFVP-LTLGMAFLLAIMETVYVLSGKQIYKDMTKF-WGKLFGI 61 V RL FA+ A+ H L +G + +LA+ + + + Q D+T LF Sbjct: 10 PVLGHRLIFAIDAILHVLISHGAAVGGSIVLALTQWYAIKTNDQKLYDLTYKILFVLFIA 69 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFF-----F 116 A+G TG+ + + +F E ++ F +E F+ +F + Sbjct: 70 ATAIGALTGIGIWIHANIIDPPAIGSLLRVFFWKWFTEWIV-FNVELIFLLAWFLTWKTY 128 Query: 117 GWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVL 176 GW++ K + + A+ S L+ + I G+M P ++ + + Sbjct: 129 GWEKRTKN--LKFGIVYAVASWLTMVIITAILGFMLTPGNW---LKSDFPAQPDYIASLF 183 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLK--GRDFAFAKRSFAIAASFGMAAVLSV 234 NP + F IS ++ D A +++ +A + Sbjct: 184 NPSWIPSLMFRTFFAI----GFAAAISMYWTWWFTRNDLALREKAERWFGRIVLATIPIT 239 Query: 235 IVLGDESGYEMGDV 248 I+ G ++ Sbjct: 240 IIFGLWYYAQIPQE 253 >UniRef50_B8J3P6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3P6_DESDA Length = 459 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 83/228 (36%), Gaps = 14/228 (6%) Query: 12 FALTAMYHFLFVP-LTLGMAFLLAIMETVYVLSGKQIYKDMTK-FWGKLFGINFALGVAT 69 AL A+ H + L +G+ ++ + +T+ + + + +++ G + ++G T Sbjct: 17 IALDAVLHVIISHGLAIGLMTMIILFQTLTWMGKGEHWAKISRSLLGPTVVVITSVGAVT 76 Query: 70 GLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL---GKVQH 126 G+ + F + +F P IE AF E + ++++ WDRL + Sbjct: 77 GVGIWFITSILAPEGIGSLIHLFFWPWFIEW-GAFTSEVILLLIYYYLWDRLAEKQPGKL 135 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + W + + SA+ I G+M P F + NP + Sbjct: 136 AALGWGYVVMAVFSAILISGILGFMLTP--------DGWPWGQDFDQAYFNPTFAPQVFL 187 Query: 187 TVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSV 234 +A+G G++ + AW + + AV V Sbjct: 188 RLAAGLAIGSLLLTAWIAWRFKGTAQERGSALRLSGGVFLACVAVAGV 235 >UniRef50_Q1ASZ4 Cytochrome bd-type quinol oxidase subunit 1-like protein n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASZ4_RUBXD Length = 448 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 81/247 (32%), Gaps = 15/247 (6%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL 71 A+ H L L LG + + E + +++ + Y+ + +L I FA G A + Sbjct: 17 IAVLVQTHILIATLILGASLIAPTAEYLGMVTKQPRYERFARNLARLIVILFATGSALAI 76 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL--GKVQHMCV 129 T T + + Y+ +IF +E F + ++ WD+L K H+ Sbjct: 77 TFVLALVTLFPIFFSYLQNIFFWVFLVEA-FLFLGVIIVLYAWYSVWDKLAYRKSLHVVF 135 Query: 130 TWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVA 189 ++ + I V +M P + + LNP +H Sbjct: 136 GFVAGGIGLIQMTMINVIASYMLTP---------SEAPVTDVASTYLNPTFVPLNMHRFV 186 Query: 190 SGYVTGAMFILGISAWYMLK---GRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 I G +AW L+ D + +G +L V+G + Sbjct: 187 GNLSYVGFLIAGWAAWRYLRSTGEEDREYYDWMGHFGLLWGFGFLLLQPVVGYGYLKAIR 246 Query: 247 DVQKTKL 253 + Sbjct: 247 ESSPEAF 253 >UniRef50_D1AZW3 Cytochrome c class I n=2 Tax=Campylobacterales RepID=D1AZW3_SULD5 Length = 445 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 77/257 (29%), Gaps = 14/257 (5%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-N 62 S +T H LF ++G A L A + + Y K +G I + Sbjct: 13 PEYGSAWMMGITGTIHILFSHTSVGAAMLFAFLAHKAYKENRSDYYPYMKKYGMFLLIFS 72 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + LG TG + + + F A E + F E V + + +++ Sbjct: 73 YVLGSITGPGIWYTATAASPRGISALIHNFVWVWATEWVF-FIYEVIGVFVLVYFMNKID 131 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 K H+ +T+ A+ S + I+ +M P + + T F + P + Sbjct: 132 KKTHLQLTYTFAIASVGTLALIIGIISFMMWP-GTQAYYATGSASDA-FFGINTFPHMFL 189 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + + V G + ++ + + + + Sbjct: 190 RVGFMIMMSGVIGLLISSA------MRKENEELSNELSRKMGYVSIFGGFITLFFFVWYM 243 Query: 243 YEMGDVQKTKLAAIEAE 259 + A+ A Sbjct: 244 GTL----PDNAHAVFAF 256 >UniRef50_UPI0000DAEF89 hypothetical protein Wendoof_01000963 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAEF89 Length = 230 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 3/214 (1%) Query: 306 GLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVA 365 GL L H+ M+ E+ Q ++ L + Sbjct: 5 GLNTLK--HQPTKIAAMEGIWETEKGAGLLLFAYPDQQNEINHYEIKIPNLASLILTHDF 62 Query: 366 DATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRA 425 +++ K+ P V ++++FR+MV G L++ I ++S +R ++ + +L Sbjct: 63 LGEVKGLKEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFLHGW 122 Query: 426 ALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVA-NSSLTAGDLIFSMVLICGLYTL 484 + +P +IA+ AGWF E GRQP+ + ++ T + +S++T + +S++ +YTL Sbjct: 123 WISMMPSGFIALLAGWFTTEIGRQPYTVYGIMRTIESFSSAITGPQVAWSLIAFIVMYTL 182 Query: 485 FLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTT 518 A + + K G +K ++ + Sbjct: 183 IFGAGSYYILKLIYKGIPVIKEEEQFYKHGIGAS 216 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 5/148 (3%) Query: 238 GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIAT 297 GD G Q TK+AA+E WET+ A LF PDQ+ E N + I+IP +I T Sbjct: 1 GDRHGLNTLKHQPTKIAAMEGIWETEKG-AGLLLFAYPDQQNEINHYEIKIPNLASLILT 59 Query: 298 RSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLL 357 V GLKE + + ++ ++ + ++ L L Sbjct: 60 HDFLGEVKGLKEWKKEDRPPVVWVFWSFRVMVGVGILMIIIGSVSVIQYLRGKLFQSCFL 119 Query: 358 KRY----TPNVADATEAQIQQATKDSIP 381 + P+ A A P Sbjct: 120 HGWWISMMPSGFIALLAGWFTTEIGRQP 147 >UniRef50_D0LWM7 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWM7_HALO1 Length = 490 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 12/221 (5%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKD-MTKFWGKLFGINFALGVATGLTMEF 75 ++H +G LL E + M F+ L ++F LG TG+ M F Sbjct: 33 IFHVFLAQFAIGGGMLLCYFEHLRASGKVPAAAHFMDGFFKVLVLVSFVLGALTGVGMWF 92 Query: 76 QFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVAL 135 + + D F A+E F LE F+ DRL + ++ Sbjct: 93 TSIQTSARTIGLMVDAFHWLWAVEWTF-FLLEVVTGYTFYRYGDRLPDRLRQRLLIFYSI 151 Query: 136 GSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTG 195 + S WI W P A +E + NP ++ Sbjct: 152 AAWGSLFWINGILSWQLTPGAW--------LENGNVWAGFFNPSFFPSLLYRTLVSMTIA 203 Query: 196 AMFILGISAWY--MLKGRDFAFAKRSFAIAASFGMAAVLSV 234 A+ + + + + + A R+ + +L + Sbjct: 204 ALVACLVINFMSELSREQRHALIGRASHFLVPMALMPLLGL 244 >UniRef50_A2BMU6 Protein with universal conserved domains n=3 Tax=Archaea RepID=A2BMU6_HYPBU Length = 559 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 3/158 (1%) Query: 9 RLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVA 68 R+ + H+ + +G++FL I +Y + + ++ + K F I FA+G A Sbjct: 17 RVLSLIGIEAHWAILQYVVGLSFLSFIAYLIYAKTNDKKWERLAYTLFKGFVIVFAVGAA 76 Query: 69 TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMC 128 TG EF W + G PL E + AF LE F+ L ++GW + GK + Sbjct: 77 TGTASEFGLVLLWPNLTEAAGRYIYFPLYAE-VFAFLLEVVFIYLTYYGWKKFGKSAMVV 135 Query: 129 VTWLVALGSNLSALWILVANGWMQNPIAS--DFNFETM 164 + +L +G SA I+ N +M P ++ T Sbjct: 136 LLFLSFIGPWYSAAMIVSVNSYMVAPTGIVPAYDPNTG 173 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 87/330 (26%), Gaps = 74/330 (22%) Query: 175 VLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLK-----GRDFAFAKRSFAIAASFGMA 229 +PV +H + + + I+ A + + +F AA + Sbjct: 285 FKSPVYLASILHVIGAALTVSSFTIMAAYAMRIKSYGKSPKEYKDYVNAAFKFAAVSALV 344 Query: 230 AVLSVIVL-GDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQI 288 + + G E G + K AA+EA + G Sbjct: 345 TIAIQGFVFGHEMGTSIAHYNPEKFAAMEATTDQITPVTKILPGGE-------------- 390 Query: 289 PYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMK 348 + ++A + P+ ++ + Sbjct: 391 -KLVALLAYGDPNAPLPNYDKIPSDY---------------------------------- 415 Query: 349 KDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSF 408 Q A S +++ + G L+ Sbjct: 416 ---------------CFFPATLQEDAARIGSCKPPLIIHYLYYAKTGLGILMGLYALAIV 460 Query: 409 WSVIRNRIGEK--KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLP--TAVANS 464 + + R + EK +WLL A I + GW V E GR+PW I V+ A + Sbjct: 461 FYLWRTKDPEKTPRWLLSVAPLSIIIIQFVSFLGWAVREIGRKPWTIYGVMTPDVAHTVN 520 Query: 465 SLTAGDLIFSMVLICGLYTLFLVAELFLMF 494 + G + + + + ++ Sbjct: 521 PPSVGAVTLVAIFFLAILAALGYSVYRFLW 550 >UniRef50_B2V8T1 Cytochrome c class I n=2 Tax=Sulfurihydrogenibium RepID=B2V8T1_SULSY Length = 457 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 87/251 (34%), Gaps = 13/251 (5%) Query: 2 LDIVELSRLQFALTAMY--HFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLF 59 +D + + L + H +F+ + LG + L I + L + Y + Sbjct: 25 MDALLVPVFHILLVVSFLVHIVFINVLLGSSVLSVINNWIGHLKNDKNYDKVAYLLTTPV 84 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 I+ +G G+ ++ + + + +P + + + L+ F W Sbjct: 85 TISENMGALWGVAPLLIVSVMYTAFFYSA-SVMNSPQWLHIIWGNVVAFLISYLYKFTWH 143 Query: 120 RL--GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 +L K H+ + + A+ L++ + +M + T F ++V Sbjct: 144 KLEDHKALHITIGAIAAI------LFLSLPPVFMST-VQLYITPSTWTP-NTHFWDVVSR 195 Query: 178 PVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVL 237 P + H + MF+L + KG+D A ++ + + + + Sbjct: 196 PDVLFRLAHFYLGAFAVNGMFMLLYGVYKKSKGQDLEAANILIRQGKAWFLVPTVLNLFV 255 Query: 238 GDESGYEMGDV 248 G + ++ + Sbjct: 256 GTLAFFQFPNY 266 >UniRef50_A1S0C2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=2 Tax=Archaea RepID=A1S0C2_THEPD Length = 396 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 87/234 (37%), Gaps = 5/234 (2%) Query: 12 FALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL 71 AL H + V + + ++ ++ ++ G + + + + K++ + L G Sbjct: 8 MALVFGVHIVAVNIGIALSTIVPLLVKRSRALGDKGLEGVARSLFKVYAATYGLAGVMGT 67 Query: 72 TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 + + + G++ P I +++ L + F++GWDR H V W Sbjct: 68 AFTVFLASFYPEFVGVAGNLTMVPFGI-SIVSIMLHFFAIVAFWYGWDRFSPKVHEAVGW 126 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 L+A + L ++ P ++ + +LNP ++ +V Sbjct: 127 LLAATAYTIPLGFRAVFAFLNTPAG----LVLGEKPSLNVVQALLNPTFPPLYLKSVVGA 182 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEM 245 V G +F+ + A+ L+ + + + + + +++ LG + Sbjct: 183 LVAGFLFVAAVLAFKGLRTALTDAERGLYVFSLRYASMLLFAMMFLGAWYAVSL 236 >UniRef50_UPI00003836AC COG1271: Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003836AC Length = 215 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 7/177 (3%) Query: 346 SMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIA 405 +++ + L + + + +++ P V ++++FR+MV+ G L+L + Sbjct: 26 TVRYAVEVPKLSSLILKHGLNEPLNGLDTVPRENWPPVPVVFWSFRVMVSLGMLMLLLGM 85 Query: 406 LSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS 465 S + + ++ E L R AL P ++AV AGW E GRQP+ + +L TA + S Sbjct: 86 GSLVARYKGKLYEWVALHRFALTMGPAGFVAVVAGWITTEVGRQPFTVYGLLRTAESASP 145 Query: 466 LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR 522 L+ + S++ +Y + + P Y E P R Sbjct: 146 LSTPAVAASLIAFVLIYFAVFGMGVLYILHLMAKSP-------YRGEHGIEPGAPIR 195 Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 5/162 (3%) Query: 256 IEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHE 315 +E +++ P A LFG+PDQE T ++A+++P +I ++ P+ GL + ++ Sbjct: 1 MEGHYQSHPDGAPLILFGLPDQEAGTVRYAVEVPKLSSLILKHGLNEPLNGLDTVPRENW 60 Query: 316 ERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYT----PNVADATEAQ 371 + ++ ++ L + K L + L R+ P A A Sbjct: 61 PPVPVVFWSFRVMVSLGMLMLLLGMGSLVARYKGKLYEWVALHRFALTMGPAGFVAVVAG 120 Query: 372 IQQATKDSIP-RVAPLYFAFRIMVACGFLLLAIIALSFWSVI 412 P V L +A ++F + Sbjct: 121 WITTEVGRQPFTVYGLLRTAESASPLSTPAVAASLIAFVLIY 162 >UniRef50_C7I0Y1 Cytochrome c family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I0Y1_THIIN Length = 493 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 4/245 (1%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-N 62 + + H L ++G A L A++E+ V K K +G + + Sbjct: 14 PQIGTAWVMGIIGTIHVLASNTSVGAAVLFALLESRSVRENKPEIMQYIKKYGMFLLVFS 73 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + G TG + + + F A E + F +E V + ++ Sbjct: 74 YIWGSVTGPGIWYSTTVASPRGISALIHNFVWAWATEWVF-FTVEVIGVYALVYTIGKID 132 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H+ +TW + S + + I+ +M P + + + F L Sbjct: 133 PKTHLKITWTFVVSSVATLVLIIGILSFMMWPGSDRWYLTGSVFDA--FYNLNFAAQLAD 190 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + + S V G++ + I L+ R G + + + + Sbjct: 191 RGFLMLTSAAVVGSIIVAAIPKGDPLRRDVGQTVARLGLTGLIGGALSFMWYVATLPPNA 250 Query: 243 YEMGD 247 + Sbjct: 251 LVILK 255 >UniRef50_A1DYL3 Putative uncharacterized protein (Fragment) n=3 Tax=Bacteria RepID=A1DYL3_SALTI Length = 145 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 65/144 (45%), Positives = 97/144 (67%) Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300 S YE+ +Q KLAA+E EW+T+PAPA F L P QE+E N FA++IP LGI+AT S+ Sbjct: 2 SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL 61 Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360 DTPV GLK LM R++ G +A+ L++++ G+ V + F++++ DLGYG+LL +Y Sbjct: 62 DTPVPGLKNLMDDALPRLKRGREAWLLMQEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY 121 Query: 361 TPNVADATEAQIQQATKDSIPRVA 384 P++ T Q + A + +IP+VA Sbjct: 122 APDMNHVTPEQYRAAQRGAIPQVA 145 >UniRef50_D2MLC8 Cytochrome bd-type quinol oxidase subunit 1-like protein (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLC8_9BACT Length = 569 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 17/264 (6%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQ----IYKDMTKFWGKLFGINF 63 SR+ + H + L + +E ++S + Y + + K+ + Sbjct: 19 SRVLLWVANQQHLYYGSFVLAVPIFCMCIEFAGLVSKDKAMAKKYDQLAYDFVKISLTAY 78 Query: 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG- 122 +L G + F F T + + Y+ IF + I LM F ES + ++++GWD++ Sbjct: 79 SLTAILGGILIFTFLTLYPAFFGYLSSIFRPVMHIYALM-FVAESGTLYIYYYGWDKMKD 137 Query: 123 ---KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPV 179 K H ++ ++ + + G+M +P D E R + + ++ + Sbjct: 138 GLLKWLHCSMSVVLNVIGTVLMFLANSWIGFMMSPAGVD---EQGRF-LGNIWHVLHTAL 193 Query: 180 AQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFA---FAKRSFAIAASFGMAAVLSVIV 236 VH + G + +A+ L ++ IA S G+A ++ + Sbjct: 194 WNPLNVHRILGNMAFGGGVVAAYAAYRFLSAKNDEERAHFDWMGYIAMSLGVAFLIPLPF 253 Query: 237 LGDESGYEMGDV-QKTKLAAIEAE 259 G E+ Q+ + + Sbjct: 254 AGYWLMREVYAYRQQMGITLMGGL 277 >UniRef50_UPI0001744B63 hypothetical protein VspiD_06485 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B63 Length = 474 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 90/261 (34%), Gaps = 17/261 (6%) Query: 2 LDIVELSRLQFALTAMYHFLFV-PLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWG-KLF 59 LD V RL L A H L PL +G +L ME + + +F Sbjct: 8 LDHVAGGRLIIGLIASLHVLINHPLAVGAYPILTWMEWWAHKHQRPDIDRLAYRVTSVVF 67 Query: 60 GINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 119 + +G TG+ + + + +F E L+ F E + +F W Sbjct: 68 IVTTTVGALTGVGIWVSTSLFAPFAIGSLLRVFFWGWFAEWLV-FISEVGLIMWWFLSWK 126 Query: 120 RLG----KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELV 175 + K +H+ + +++ S + I+ G+M P + +F + + Sbjct: 127 QANTPEKKRRHIKIGVALSVMSWFTMALIVAVLGFMMKPGEWS--------QTRAFLDAM 178 Query: 176 LNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 +NP+ + +TGA+F+ S + + F M +L + Sbjct: 179 VNPLYLPQLGFRTFFALMTGAVFVWFSS--FFFTKGQRELRTWLVYRLSHFTMVGLLMTL 236 Query: 236 VLGDESGYEMGDVQKTKLAAI 256 + G + DV K A Sbjct: 237 LFGLWYWQSVPDVMKANSAVA 257 >UniRef50_D0L1U5 Cytochrome c class I n=2 Tax=Proteobacteria RepID=D0L1U5_HALNC Length = 493 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 12/240 (5%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI- 61 + S + A H LF +G A L + + + D K +G + Sbjct: 12 EPGIGSGWVIGIIATIHVLFSHTAVGAALLFTYLAYLGYRDDRPELLDFIKKYGLFLLVF 71 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121 ++ LG TG + + + F A E + F +E V + + ++ Sbjct: 72 SYILGSITGPGIWYSTTVGSPRGISALIHNFVWKWATEWVF-FVIEVVGVYMMVYLVGKV 130 Query: 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181 K ++ + + S + L I+ +M P D+ + ++ F Sbjct: 131 DKATYLRIAITFGMASFATMLAIVGILSFMMEPGMPDWAEKGG--YLLGFYGDNTFAQLA 188 Query: 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241 ++ V G + + G+ +D F A G+ + + I Sbjct: 189 IRIAFMFTMTAVVGGIVVAGL--------KDQVFKTWLARRLAVLGIVSTVVGIAFYPWY 240 >UniRef50_B8G4R1 Putative uncharacterized protein n=4 Tax=Chloroflexaceae RepID=B8G4R1_CHLAD Length = 470 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 10/197 (5%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQI-YKDMTKFWGKLFGINFALG 66 S + A+ + +H L LT+ A+ +E V + Y + + L + G Sbjct: 12 SAMYVAIVSAFHVLASHLTVAAAWFNLYLERRAVYEQRPELYVYLKRSALGLLVFAYVFG 71 Query: 67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQH 126 G+ + + F E M F ++ + +++ +DR+ H Sbjct: 72 AMAGVGIWQTTTAANPRGISTLIHNFVFYWGAEWYM-FLIDVVGIIAYYYSFDRVSPRIH 130 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + + W++ALG + I+ + P + +E + NP + + Sbjct: 131 LRLAWILALGGTGTLTIIVGILSFKLTP--------GLWLETGNSLNGFFNPTFWPQILL 182 Query: 187 TVASGYVTGAMFILGIS 203 + + A + L IS Sbjct: 183 RFSLMFTITAAWALLIS 199 >UniRef50_A2BMU5 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMU5_HYPBU Length = 403 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 6/236 (2%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 AL +H + V L + +A + ++ SG + + K + + + Sbjct: 9 ALVFAFHIVMVNLGIFLALYVPYLKRKADNSGDEDLDKVAHKLMKFYAATYGVAGVYATA 68 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWL 132 + + + G + P + LM + + F++GWDR + H L Sbjct: 69 FTVFLLSFYPDFLGLAGHLTLIPFGLAILM-IVVHFFSITGFYYGWDRWSRRVHYFFGAL 127 Query: 133 VALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGY 192 +AL + L ++ P+ + ++ + L NP ++ ++ + Sbjct: 128 LALSALLIPFAFRAVFAFLNIPVGLE--LSGGKLSLNVAKALTGNPTYWPLYLKSLIAAV 185 Query: 193 VTGAMFILGISAWYMLKGRDFAFAK---RSFAIAASFGMAAVLSVIVLGDESGYEM 245 GA I+G A+ +K D + + + ++ +IV+G + Sbjct: 186 TAGAFAIVGGLAYSYVKATDEGYKRAVSQVVKELTPIIAIGLVLMIVMGLWYAVSL 241 >UniRef50_B2JRW5 Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRW5_BURP8 Length = 234 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 4/230 (1%) Query: 170 SFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMA 229 ++ +V NP + VH + ++ A F+ G++AW++L+ R+ A+ +++ + Sbjct: 2 NWWAIVFNPSFPYRLVHMTLAAFLATAFFVGGVAAWHLLRDRNAHGARTMLSMSLWMALL 61 Query: 230 AVLSVIVLGDESGYEMGDVQKTKLAAIEAEWE--TQPAPAAFTLFGIPDQEEETNKFAIQ 287 A ++ GD G + Q ++AA+E +W+ + LF IPD E N + + Sbjct: 62 AAPLQLLAGDRQGENTLEHQPQRVAAMEGDWDARAPGSGEPMVLFAIPDMRERRNHYEVS 121 Query: 288 IPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSM 347 IP + ++ L +R A + + V Sbjct: 122 IPRVASLYLRHNLSGVFALL--AAGFVYAIVRRRAFAPLVFALVWFVFALFCVLYTIFPF 179 Query: 348 KKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACG 397 + P + ++ FR V Sbjct: 180 GLPPSITIAQGSSPPRTQAFVLGGSSVLVPAVLVYSTFAFWVFRGKVTSA 229 >UniRef50_D0VD73 Cytochrome d oxidase subunit I (Fragment) n=12 Tax=Gammaproteobacteria RepID=D0VD73_ECOLX Length = 132 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 359 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 418 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE Sbjct: 1 RYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGE 60 Query: 419 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 478 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI Sbjct: 61 KKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLI 120 Query: 479 CGLYTLFLVAEL 490 CGLYTLFLVAEL Sbjct: 121 CGLYTLFLVAEL 132 >UniRef50_Q609P5 Cytochrome c family protein n=1 Tax=Methylococcus capsulatus RepID=Q609P5_METCA Length = 455 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 12/245 (4%) Query: 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI-N 62 S + A+ H L ++G A + + TV V + + + +G + + Sbjct: 17 PALGSGWVLGIIAVVHVLASHTSVGAALVSTWLATVAVRRNRPELLEYVRRYGVFLLVFS 76 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG 122 + LG TG + F + + A E + FF+E + L + ++ Sbjct: 77 YVLGSITGPGIWFSATVASPRGLSALIHSYVWWWATEWVF-FFIEVIGIYLLVYLAGKVD 135 Query: 123 KVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 ++ + W+ L S + L I+ +M P + E Sbjct: 136 GRSYLKIAWIFGLASWATMLIIVGILSFMMWPGQERWFTEGGT------LNGFFGLYTFA 189 Query: 183 KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESG 242 + + + A+ I+A+ RD AF A G+ + V Sbjct: 190 QILSRTCFMLMAAALAGGLIAAYL----RDGAFRLEMTRKLAWVGILGAVLGAVFFQWGL 245 Query: 243 YEMGD 247 + + Sbjct: 246 TTLPE 250 >UniRef50_Q1ARV9 Putative uncharacterized protein n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARV9_RUBXD Length = 450 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 91/270 (33%), Gaps = 14/270 (5%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGIN 62 + +R+ L + H F L +G A +++ +G + + + Sbjct: 22 SSLGGARVITGLVMLIHIFFAELFVGFALAAPVLQYWGARTGTPRMDRLAHSLVRFNVLT 81 Query: 63 FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR-- 120 F+ G + + + + F L + +++ L + +++ WDR Sbjct: 82 FSTGATFAVLFLVLLVGLYPQVTASLFTHF-FYLVVIAMLSMLLALWGMYTYYYKWDRYS 140 Query: 121 -LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSF---SELVL 176 L K +H+ + + + + + + + +M + + SF + + Sbjct: 141 VLNKGRHIAFGFSMGVFIWIWMVIMTGIDTFMVTGGGAR-TPGISAENVASFGAALQAMF 199 Query: 177 NPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR---DFAFAKRSFAIAASFGMAAVLS 233 NP+ +H + A + +A+ + + D AF + ++ +G ++ Sbjct: 200 NPMFVEMSLHRTFANLSWPAFAMAAWAAFMYARSKTPEDRAFFDWTTSVGLIWGAGLLML 259 Query: 234 VIVLGDESGYEM---GDVQKTKLAAIEAEW 260 G Y M V AA + Sbjct: 260 QPFSGFAIAYAMKLSAPVDPVSGAAEGGAY 289 >UniRef50_UPI0001A4281E cytochrome d ubiquinol oxidase subunit I n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4281E Length = 145 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 69/77 (89%), Positives = 73/77 (94%) Query: 17 MYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQ 76 MYHFLFVPLTLG++FLLAIM T YVL+GKQIYKDMTKFWGKLF INFALGVATGLT+EFQ Sbjct: 1 MYHFLFVPLTLGLSFLLAIMNTTYVLTGKQIYKDMTKFWGKLFAINFALGVATGLTLEFQ 60 Query: 77 FGTNWSYYSHYVGDIFG 93 FGTNWSYYSHYVGDIF Sbjct: 61 FGTNWSYYSHYVGDIFW 77 >UniRef50_UPI0001698A02 hypothetical protein Epers_07948 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698A02 Length = 287 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 9/179 (5%) Query: 8 SRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGV 67 SR + A H F L L + + ++E V V SG + Y M + K+ F++ Sbjct: 91 SRAVVWILAQMHLFFGALVLAVPLFVLVIELVGVTSGDERYDSMAHEFMKISLTGFSITA 150 Query: 68 ATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG----K 123 G ++ + + Y+ +FGA + + FFLES F+ +++GW+ + K Sbjct: 151 IFGGSLALALFLLYPDFMGYMMHVFGAQWLVYAGL-FFLESFFLYTYYYGWNAMRYGNAK 209 Query: 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQV 182 H+ + L+ + +M P + + + E++ P+ Sbjct: 210 WVHLSLGLLLNGAGMTIMVMSNSWATFMMAPSGVNEVG----AVIGNIWEVMKGPLWNP 264 >UniRef50_A8EVK8 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVK8_ARCB4 Length = 441 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 84/262 (32%), Gaps = 24/262 (9%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 + + H F+ + +G + I + V Y ++ +G G+ Sbjct: 29 IVFVVHICFIYMLIGASTASVIYNIMGVFKKDSNYDKFAYRMTNYTTVSENMGALWGVAP 88 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL--GKVQHMCVTW 131 ++ + + + + + + + F W L K H+ + Sbjct: 89 LLVISVLFTGFFYTAILKISPHI-LHIIYGNIIAFLLSYAYKFSWHALQNHKGFHIAIGL 147 Query: 132 -LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVAS 190 V L +++ ++N +MQ + + + E++ PV + ++ + Sbjct: 148 SAVLAFFTLPFIFMSMSNLYMQ---------PELFASINNIWEIMFTPVTGFRLLNFFLT 198 Query: 191 GYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQK 250 ++ + ++ I A ++ +G D K S + + + A IV+ Sbjct: 199 AFMATGIVMIFIGARWVKRG-DTEIGKISISQGKKWFLLATPLNIVVMPLL--------P 249 Query: 251 TKLAA--IEAEWETQPAPAAFT 270 A EA T F Sbjct: 250 FVFTARISEALMHTGFIYLPFI 271 >UniRef50_Q3JLJ0 Ubiquinol oxidase subunit I, cyanide insensitive n=4 Tax=Burkholderia pseudomallei RepID=Q3JLJ0_BURP1 Length = 572 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Query: 408 FWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSS-L 466 R+ ++ L P+ ++AV AGW E GRQPW + ++ TA + + L Sbjct: 433 LTLWRGGRLYVRRGWLATCRAATPIGFVAVLAGWTTTEAGRQPWTVYGLMRTADSVTPSL 492 Query: 467 TAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPS 502 T D+ S+ Y A L+ + RLGP Sbjct: 493 TTTDVALSLAAYVLCYLAMFGAGFVLLLRLLRLGPP 528 >UniRef50_C2AKT9 Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKT9_TSUPA Length = 157 Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%) Query: 394 VACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAI 453 + + W R RI ++KW R L +P P++A +GW E GRQPW + Sbjct: 1 MGWSVGSGVLALAGLWVTRRKRIPDQKWFSRICLIALPTPFLANTSGWVFTEMGRQPWVV 60 Query: 454 GEV--------LPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGP 501 L A A S + + FS+V +Y + + L+ ++ GP Sbjct: 61 VPNPNGDQSIRLTVADAVSGHSTLMMAFSLVTFAAVYGVLYLLWFALLRRYVIEGP 116 >UniRef50_A4WI49 Cytochrome oxidase,subunit I n=4 Tax=Archaea RepID=A4WI49_PYRAR Length = 368 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 8/217 (3%) Query: 13 ALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLT 72 L H LF +TLG + A + + + K+ ++ G Sbjct: 13 GLAVTLHILFTAMTLGTGLIAAYYRWLAYRKNDAWSELFARKAFKVLIVSELFSGVWGTI 72 Query: 73 MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWL 132 + ++ + + P+AI + + + ++ W ++ H + W+ Sbjct: 73 ITVFLAGFFTALTTLATNALFIPIAIAIASI-MVRIPTIAISWYTWGKIHPKTHSLIMWV 131 Query: 133 VALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGY 192 +AL + NP+A + +T E NP+ ++HTVA+ Sbjct: 132 MALSGFGIPFGFRAIFAEINNPVAVGYYLQTGNNPGFMPYE---NPLFWTLYLHTVAAVI 188 Query: 193 VTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMA 229 TG + + +D + I MA Sbjct: 189 STGGFVAASLMSL----EKDPKGISTALKIGFLVLMA 221 >UniRef50_C7PGU8 Cytochrome c class I n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGU8_CHIPD Length = 446 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 13/192 (6%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 ++ + H +FV L +G + L E + + Y K +N +L V G+ Sbjct: 32 ISFLAHIVFVNLMVGGSLLTLWAEIKGLK--DKDYDKFAYEMAKTITVNKSLAVVLGVAP 89 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLG--KVQHMCVTW 131 T +S Y + + G + I + + L + W +L K H+ + Sbjct: 90 LLSINTLYSVYFYSANALTGL-MWISVIPLVTIAFLLTYLHKYSWYKLSDNKALHIAIVG 148 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 L L LV M P + F ++ P +++H + + Sbjct: 149 AAVLIFLFIPLIFLVNINLMLFPEKWG--------TVGGFLSALVLPNVFPRYLHFIFAS 200 Query: 192 YVTGAMFILGIS 203 +F+ + Sbjct: 201 LGVTGLFVFWYT 212 >UniRef50_C2HR41 Putative uncharacterized protein n=2 Tax=Lactobacillus RepID=C2HR41_LACAC Length = 132 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 ++IV L+R QFA+T ++HF FVP ++G F++AIME++YV +GK YK MTKFWG +F + Sbjct: 8 MNIVSLARFQFAMTTIFHFFFVPFSIGTVFVVAIMESMYVHTGKSEYKKMTKFWGNIFLL 67 Query: 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGL 113 +FA+GV TG+ F G ++S + + LA M F + V L Sbjct: 68 SFAVGVVTGI-FCFFIGYSYSSGPRPISSLPLGELASGFTMGFMIALLSVYL 118 >UniRef50_A4N210 Probable cytochrome oxidase subunit I n=5 Tax=Gammaproteobacteria RepID=A4N210_HAEIN Length = 82 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 51/82 (62%), Positives = 68/82 (82%) Query: 435 IAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMF 494 + +E GWF+AEYGRQPWAI E+LP V+ S+L+ GDL FS+ LIC LY F++ E++LMF Sbjct: 1 MPIECGWFLAEYGRQPWAIYEILPVGVSASNLSTGDLWFSIGLICALYLAFIIVEMYLMF 60 Query: 495 KFARLGPSSLKTGRYHFEQSST 516 K+ARLGPS+LKTG+Y+FEQS+ Sbjct: 61 KYARLGPSALKTGKYYFEQSAK 82 >UniRef50_UPI0001744B64 putative Cytochrome-c oxidase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B64 Length = 447 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 21/196 (10%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 L + H FV L +G +F++ E + + K + + K +N +L V G+ Sbjct: 38 LFFLLHIFFVNLMVGGSFMVVFFEYLGLRRKK--WDGLAYEVAKTVTVNKSLAVVLGIGP 95 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIE---GLMAFFLESTFVGLFFFGWDR----LGKVQH 126 ++ + + G + + AF L L + W K H Sbjct: 96 LLCINLVYTVQWYGANALTGHAWLLIVPTVISAFLLA----YLHKYTWHAWDHGWRKKLH 151 Query: 127 MCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVH 186 + V L+AL L L M P + ++ F + +++H Sbjct: 152 LAVGVLMALHFLFIPLIFLANVNLMLFPSEWE--------KVRGFFSSLQIGNVFPRYLH 203 Query: 187 TVASGYVTGAMFILGI 202 + + ++F++G Sbjct: 204 FLLASVALASLFMVGW 219 >UniRef50_B6B0F5 Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B0F5_9RHOB Length = 152 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 10/127 (7%) Query: 213 FAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLF 272 +F KR + G+ + GD G + Q K+ IE WET P L Sbjct: 1 MSFHKRIY-----LGIKGFIPETGRGDMRGLNTLEYQPAKVTEIEGNWETDP-NIPLLLL 54 Query: 273 GIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQH----EERIRNGMKAYSLL 328 IP+Q +N F I IP +I + G + +++ R+ ++ ++ Sbjct: 55 AIPNQGTRSNNFEIAIPNGAPLILKHKANGLAPGHNDFVLEDSTIMHPRVSAVFFSFRII 114 Query: 329 EQLRSGS 335 Sbjct: 115 IGTGVAM 121 >UniRef50_A7IBY2 Cytochrome bd-type quinol oxidase subunit 1-like protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IBY2_XANP2 Length = 103 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 41/63 (65%) Query: 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61 LD V L+R QFA +HF+F ++G+A L ++E +++ +G+ +Y ++ ++W K+F + Sbjct: 5 LDPVILARAQFAFPVSFHFIFPAFSIGLASYLMVLEALWLTTGRGVYANLYRYWIKIFAV 64 Query: 62 NFA 64 F Sbjct: 65 VFG 67 >UniRef50_B2SHX0 Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SHX0_XANOP Length = 87 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 39/72 (54%), Positives = 52/72 (72%) Query: 377 KDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIA 436 D++PRV PL++ RIM A G L+A A++ WS ++ EK+W LR AL+ +PLPWIA Sbjct: 1 MDTVPRVLPLFWTLRIMAAIGIYLIAFFAIAVWSACKHHFQEKRWFLRLALWTLPLPWIA 60 Query: 437 VEAGWFVAEYGR 448 +E GWFVAEYGR Sbjct: 61 IECGWFVAEYGR 72 >UniRef50_D1NHT7 Cytochrome oxidase, subunit I (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHT7_HAEIN Length = 136 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/79 (46%), Positives = 54/79 (68%) Query: 393 MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWA 452 M+A G L+ + +F +RN++ + LL+ L+G+PLPWIA+E GWF+AEYGRQPWA Sbjct: 1 MIAAGGLIALLTFGAFVQNLRNKVTQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWA 60 Query: 453 IGEVLPTAVANSSLTAGDL 471 I E+LP V+ S+L + Sbjct: 61 IYEILPVGVSASNLNTNTI 79 >UniRef50_UPI0001910E6C cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001910E6C Length = 62 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 55/62 (88%), Positives = 59/62 (95%) Query: 461 VANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQP 520 +ANSSLT GDL+FSM LICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS+ T+QP Sbjct: 1 MANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSTVTSQP 60 Query: 521 AR 522 AR Sbjct: 61 AR 62 >UniRef50_C7LSV7 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSV7_DESBD Length = 355 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 82/235 (34%), Gaps = 15/235 (6%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 LT + H L + + LG + + + + L GK + +TK A V G+ Sbjct: 26 LTFILHILVMNIMLGASVIALV----HHLRGKADTEALTKSISTKLPFTIAFAVNFGVAP 81 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKV-QHMCVTWL 132 + + Y + A + + + + + + + + + Sbjct: 82 LLFMQVLYGQFL-YTSSVLMAVYWLGIVG--LVIVAYASAYIYDFRYVPLGSLRTIFIAV 138 Query: 133 VALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGY 192 L ++A +M +P + F+ +++ S+ P +++H VAS Sbjct: 139 TTLCLLVTAFIFTNNMTFMLSPASWATYFDNPWGTLLNLSD----PTVLPRYLHFVASSI 194 Query: 193 VTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGD 247 + ++ +Y +K ++ A+R ++ + + LG + + Sbjct: 195 AVAGL---ALAIFYRIKVKNDPAAQRWVRHGMNWYAYTTMVQMALGLWFLSALPE 246 >UniRef50_C8X0C5 Putative uncharacterized protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0C5_DESRD Length = 357 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 18/231 (7%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 +T + H LF+ LG + + E G + + I F + + G+ Sbjct: 26 VTFVLHLLFMNTMLGAGIIAFVDELRGGAQGGEGTVAEALSHKLTYIIAFTVNL--GVAP 83 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLV 133 + + YV + A I + L L+ F + RL + + Sbjct: 84 LLFLQVLYGQFI-YVSSVLIAVYWIAVVFLVILAYYLAYLYNFRYQRLAGARKWVIG--- 139 Query: 134 ALGSNLSALWILVANGWMQNPIASDF-NFETMRMEMVSFSELVLN---PVAQVKFVHTVA 189 SA+++L+A G++ + E S ++LN P +++H + Sbjct: 140 ------SAVFLLLAVGFVFTNNMTLMLRPEAWERYFASPGGMLLNLSDPTLIPRYLHFMV 193 Query: 190 SGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 + G +F+ +A ++ + A L+ +V+G Sbjct: 194 ASVAVGGLFVALWAAKTA--QPSTEQREQRINRGMQWFTYATLAQMVIGIW 242 >UniRef50_Q1K0H3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0H3_DESAC Length = 352 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 65/206 (31%), Gaps = 8/206 (3%) Query: 35 IMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGA 94 ++ + +++ + ++ + A + G+ + + Y + Sbjct: 41 MLAIWAHFKREPVHERLAYKIAQVLPLLIAFAINFGVPPLLFVQVVYGHLI-YSSSVLMG 99 Query: 95 PLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNP 154 + + V ++ F + LG+ + + L + A M P Sbjct: 100 VFWLSVIPVLLTVYYAVYIYDFKFWSLGRRGLPILMFAGVLM-LMIAFLFSNNMTLMLTP 158 Query: 155 IASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFA 214 D F+ ++ +E P +++H + GA+ I + + +D Sbjct: 159 ETWDIYFKNSSGTFLNLAE----PTLWPRYLHMLVGATAIGALVIALLG--RLWAKQDAE 212 Query: 215 FAKRSFAIAASFGMAAVLSVIVLGDE 240 + + + +A I++G Sbjct: 213 VGELAQRVGLRVFLAVTCVQIMVGLW 238 >UniRef50_C0GRA3 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRA3_9DELT Length = 352 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 74/229 (32%), Gaps = 19/229 (8%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 LT + H L + LGM + + ++ SG + + K A + G+ Sbjct: 26 LTFIMHLLLMNSMLGMGIMALV---KHIKSGDKH-CPVCKDISLKLPYTIAFTINFGVAP 81 Query: 74 EFQFGTNWSYYSHYVGDIFGAPL--AIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTW 131 +S + + + G I L+ F+ + ++ F +D L + Sbjct: 82 FLFLQVLYSQFIYTSSVLMGMYWLPVIALLLIFYYSA---YIYDFKYDSLS-RLKLLFLA 137 Query: 132 LVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASG 191 + + + A M NP FE M++ + P +++H V + Sbjct: 138 VTVIFGLIIAFLFTNNMTLMLNPEKWTGYFENRSGTMLNLGD----PTLIPRYLHFVLAS 193 Query: 192 YVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240 G + I + + A S+ A L + +G Sbjct: 194 IAVGGLATAII-----WRFKKDPRATEYIREGLSWFSYATLVQVAVGVW 237 >UniRef50_B8DQZ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQZ1_DESVM Length = 381 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 6/188 (3%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 LT + H LF+ + LG + S + AL V G+ Sbjct: 30 LTFVVHLLFMNVVLGTGVITLFRSLRTPFSPNDQINVDIRETAAWVPRAMALAVNFGVPP 89 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLV 133 + + Y I A + + + L+ G LG + + V Sbjct: 90 LLFLQVLYGQFI-YPSSILMAVWWLGIVGFVMMAYYGFYLYGLGHAVLGPRRTLVAGISV 148 Query: 134 ALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYV 193 AL ++A + M +P + ++++ E P +++H V Sbjct: 149 AL-LLVNAFVLTNNATLMLDPARWTGYAASPGGTLLNWGE----PSLVPRYLHMVVGAVA 203 Query: 194 TGAMFILG 201 G +FI G Sbjct: 204 VGGLFIAG 211 >UniRef50_B8J3P7 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3P7_DESDA Length = 535 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 87/339 (25%), Gaps = 8/339 (2%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 ++ H LF L +G A L + L Q + + +L V G+ Sbjct: 24 ISFGLHLLFALLIVGTAILGFVFFLQDWLDRDQAGQAWNSRFMHTHLGLKSLAVVLGIAP 83 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLV 133 +S YS + A + + + + F +R + Sbjct: 84 LLLVQIRYS-YSFFTTTGLFAYAWLAVIPLLIVAFLLIDAFNHSMER-RAWLAFFCGVVG 141 Query: 134 ALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSEL-VLNPVAQVKFVHTVASGY 192 A M + + F+ + L P ++++H + + Sbjct: 142 VGALLTVPAVFTGALALM---ERQHLWAQFGQSGGQDFASMPALAPHWLLRYLHVIGAAL 198 Query: 193 VTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTK 252 V GA F L S + F + + + + + E + + Sbjct: 199 VLGAAFQLFFST-RNNPEKAPRLRNWIFGAILAQVLIGIPLLFTVAAELDWTIMTALMIG 257 Query: 253 LAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMV 312 A + P +L + + ++G + + Sbjct: 258 ALAALLALWVLRPGQP-APCAGAGTDAALRPAEAAAPRSLLWLLPLAFVAMLVGRQFIQD 316 Query: 313 QHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDL 351 Q + AY Q D + K + Sbjct: 317 QAMNPAQAANDAYRAERAKALDPFRQPALDGYAFKLKTV 355 >UniRef50_D1UBB9 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBB9_9DELT Length = 348 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 12/191 (6%) Query: 15 TAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTME 74 T H LF+ LG A + + + + + G AL + G+ Sbjct: 27 TFTAHILFMNALLGSAAIGLV---RALRGD----GGLARAVGMKSPPLLALTINLGVAPL 79 Query: 75 FQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVA 134 N+ YV + + + A + F FG+D + + + + Sbjct: 80 LFLQVNY-GLFDYVSSVLMGGWWLAVIAALMVSYYGFYAFKFGYDSMSPARRTLLLAVSL 138 Query: 135 LGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVT 194 G+ AL + M P F+ +++ + P +F+H + Sbjct: 139 AGTLYVALMLSTNMTLMLRPEYWPQYFDKAGAAFLNWGD----PTIYPRFLHFMVGAAAI 194 Query: 195 GAMFILGISAW 205 G +F+ + W Sbjct: 195 GGLFVALLGRW 205 >UniRef50_A4MVS9 Probable cytochrome oxidase subunit I n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MVS9_HAEIN Length = 49 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 23/36 (63%), Positives = 28/36 (77%) Query: 111 VGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILV 146 +GLFFFGWDRL K +H+ T+ VA GSNLSA+WI Sbjct: 1 MGLFFFGWDRLSKGKHLLATYCVAFGSNLSAMWIFG 36 >UniRef50_C9RX36 Cytochrome bd-type ubiquinol oxidase subunit I n=2 Tax=Geobacillus RepID=C9RX36_GEOSY Length = 65 Score = 43.6 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%) Query: 3 DIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG 44 D V LSR+ LT +H ++ + +G+ ++AI + V + S Sbjct: 5 DPVWLSRVLTELTLTFHIIYATIGVGIPLMIAIAQWVGIRSK 46 >UniRef50_A8X399 C. briggsae CBR-UNC-32 protein n=4 Tax=Caenorhabditis RepID=A8X399_CAEBR Length = 953 Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 59/181 (32%), Gaps = 19/181 (10%) Query: 65 LGVATGLT-MEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123 + V G+ M F ++ ++++ D+ + I ++ FL S F+ L L K Sbjct: 578 MSVLFGIAQMTFGVLLSYKNFTYFKSDLDVKYMFIPQMI--FLSSIFIYLCI---QILAK 632 Query: 124 VQHM------CVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLN 177 + + + +L I + N +M + F E + + Sbjct: 633 WLFFGSAPGSVLGYTYPGTNCAPSLLIGLINMFMMKSRNAGFVDEEGNIVPQCWLS---- 688 Query: 178 PVAQV--KFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVI 235 F T+ + ++ + Y L + + A+ + V+ + Sbjct: 689 -TWYPGQSFFETIFVLVAIACVPVMLFAKPYYLWKEEKERREGGHRQLATIEIVLVILAL 747 Query: 236 V 236 V Sbjct: 748 V 748 >UniRef50_C6BZ61 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ61_DESAD Length = 346 Score = 41.6 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 70/233 (30%), Gaps = 16/233 (6%) Query: 14 LTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTM 73 +T H L + G A ++ + + G I K+++K L AL + G+ Sbjct: 26 ITFSVHLLLMNAVFGGAAIVFV---HSLSGGTAISKNISKKLPTLL----ALAINAGVPP 78 Query: 74 EFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLV 133 + +S YV I A + + A + + +++LG V Sbjct: 79 LLFLQAVYGQFS-YVSSILMAVFWLAVIAALICGYYGLYFHNYRYEKLGVSGRSLTMLAV 137 Query: 134 ALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYV 193 + M P F F+ + +PV +F+H S Sbjct: 138 LCMIVYIGFMLSNKMTLMLRPEVWSEYFTD----PHGFNLNLSDPVLYPRFMHFAISALA 193 Query: 194 TGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMG 246 G +F+ + + F + + VL E+ Sbjct: 194 VGGLFVALVG----KRKGYSDFVDTGMKWFSRSTLVNVLMGFWFLVALPKEIM 242 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.131 0.361 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,840,070,103 Number of Sequences: 3077464 Number of extensions: 121225634 Number of successful extensions: 654899 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 464 Number of HSP's successfully gapped in prelim test: 756 Number of HSP's that attempted gapping in prelim test: 651501 Number of HSP's gapped (non-prelim): 2434 length of query: 522 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 389 effective length of database: 631,093,644 effective search space: 245495427516 effective search space used: 245495427516 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 95 (41.2 bits)