HHsearch 1.5 NAME batch____ FAM FILE query COM //bmm/www/servers/phyre2/HH/hhmake -i /bmm/www/servers/phyre2/public_html/phyre2_output/34f020e34f773283/query.a3m -o /bmm/www/servers/phyre2/public_html/phyre2_output/34f020e34f773283/query.hhm DATE Tue Jan 17 11:21:02 2012 LENG 86 match states, 86 columns in multiple alignment FILT 6 out of 8 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.3 EVD 0.4329 0.5380 SEQ >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC >ss_conf 95589999999984257899999999999999999999964308999999999888515877889963499999999999855388 >Consensus MKNLixELLlkLAQKEEESkeLxAQVEaLExivtxMLRNMAxneqqxxixQvExALxgvkpdasxpdxdxellrxyvkkllxhprx >batch____ MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ >UniRef50_A8AK82(1-85:86) Anti-adapter protein iraP n=63 Tax=Enterobacteriaceae RepID=IRAP_CITK8 E=3e-32 s/c=1.64 id=83% cov=100% MKNLISELLLRLAQKEEESKELVAQVEALEIIVTAMLRNMAQNEQQKLIHQVEDALDGVKPDASVPDYDTELLRQYVKKLLRHPR- >UniRef50_D2TKW6(20-105:105) Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D2TKW6_CITRO E=2e-27 s/c=1.43 id=86% cov=100% MKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQNEQDTLIQQVEGALDGVKPDASIPDDDRELLRQYVQKLLKHPR- >UniRef50_UPI00019F15AA(1-59:81) hypothetical protein CATC2_11565 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F15AA E=2e-13 s/c=1.30 id=62% cov=70% MKNLVTELLLKLAQKEEESQELAAQVETLEQVITEMLRNMAWHERQIQLRQIEAALAGV--------------------------- >UniRef50_C1M7J8(1-58:80) Predicted protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7J8_9ENTR E=1e-16 s/c=1.55 id=64% cov=69% MKNLVTELLLKLAQKEEESQDLAAQVETLERVIIEMLRNMAWNDRQIFIRQIEGALAG---------------------------- >UniRef50_B5EWR4(1-86:86) Anti-adapter protein iraP n=39 Tax=Enterobacteriaceae RepID=IRAP_SALA4 E=8e-25 s/c=1.68 id=84% cov=101% MKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQNEQEMLIRQVEGALEGVKPDASVPDHDTELLRQYVKKLLRHPRH # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1400 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 1400 0 0 N 3 * * * * * * * * * * * 0 * * * * * * * * 3 0 * * * * * * 1400 0 0 L 4 * * * * * * * * * 0 * * * * * * * * * * 4 0 * * * * * * 1400 0 0 I 5 * * * * * * * 678 * * * * * * * * * 1416 * * 5 0 * * * * * * 1400 0 0 A 6 1105 * * * * * * * * * * * * * * 2643 1416 * * * 6 0 * * * * * * 1400 0 0 E 7 * * * 0 * * * * * * * * * * * * * * * * 7 0 * * * * * * 1400 0 0 L 8 * * * * * * * * * 0 * * * * * * * * * * 8 0 * * * * * * 1400 0 0 L 9 * * * * * * * * * 0 * * * * * * * * * * 9 0 * * * * * * 1400 0 0 F 10 * * * * 2582 * * * * 264 * * * * * * * * * * 10 0 * * * * * * 1400 0 0 K 11 * * * * * * * * 252 * * * * * 2643 * * * * * 11 0 * * * * * * 1400 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 1400 0 0 A 13 0 * * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1400 0 0 Q 14 * * * * * * * * * * * * * 0 * * * * * * 14 0 * * * * * * 1400 0 0 K 15 * * * * * * * * 0 * * * * * * * * * * * 15 0 * * * * * * 1400 0 0 E 16 * * * 0 * * * * * * * * * * * * * * * * 16 0 * * * * * * 1400 0 0 E 17 * * * 0 * * * * * * * * * * * * * * * * 17 0 * * * * * * 1400 0 0 E 18 * * * 0 * * * * * * * * * * * * * * * * 18 0 * * * * * * 1400 0 0 S 19 * * * * * * * * * * * * * * * 0 * * * * 19 0 * * * * * * 1400 0 0 K 20 * * * * * * * * 678 * * * * 1416 * * * * * * 20 0 * * * * * * 1400 0 0 E 21 * * 2424 298 * * * * * * * * * * * * * * * * 21 0 * * * * * * 1400 0 0 L 22 * * * * * * * * * 0 * * * * * * * * * * 22 0 * * * * * * 1400 0 0 C 23 1416 2582 * * * * * * * * * * * * * * * 1126 * * 23 0 * * * * * * 1400 0 0 A 24 0 * * * * * * * * * * * * * * * * * * * 24 0 * * * * * * 1400 0 0 Q 25 * * * * * * * * * * * * * 0 * * * * * * 25 0 * * * * * * 1400 0 0 V 26 * * * * * * * * * * * * * * * * * 0 * * 26 0 * * * * * * 1400 0 0 E 27 * * * 0 * * * * * * * * * * * * * * * * 27 0 * * * * * * 1400 0 0 A 28 678 * * * * * * * * * * * * * * * 1416 * * * 28 0 * * * * * * 1400 0 0 L 29 * * * * * * * * * 0 * * * * * * * * * * 29 0 * * * * * * 1400 0 0 E 30 * * * 0 * * * * * * * * * * * * * * * * 30 0 * * * * * * 1400 0 0 I 31 * * * * * * * 678 * * * * * 2407 2424 * * * * * 31 0 * * * * * * 1400 0 0 I 32 * * * * * * * 678 * * * * * * * * * 1416 * * 32 0 * * * * * * 1400 0 0 V 33 * * * * * * * 1416 * * * * * * * * * 678 * * 33 0 * * * * * * 1400 0 0 T 34 * * * * * * * 2424 * * * * * * * * 298 * * * 34 0 * * * * * * 1400 0 0 A 35 678 * * 1416 * * * * * * * * * * * * * * * * 35 0 * * * * * * 1400 0 0 M 36 * * * * * * * * * * 0 * * * * * * * * * 36 0 * * * * * * 1400 0 0 L 37 * * * * * * * * * 0 * * * * * * * * * * 37 0 * * * * * * 1400 0 0 R 38 * * * * * * * * * * * * * * 0 * * * * * 38 0 * * * * * * 1400 0 0 N 39 * * * * * * * * * * * 0 * * * * * * * * 39 0 * * * * * * 1400 0 0 M 40 * * * * * * * * * * 0 * * * * * * * * * 40 0 * * * * * * 1400 0 0 A 41 0 * * * * * * * * * * * * * * * * * * * 41 0 * * * * * * 1400 0 0 Q 42 * * * * * * * * * * * * * 678 * * * * 1416 * 42 0 * * * * * * 1400 0 0 N 43 * * * * * * 2407 * * * * 301 * * * * * * * * 43 0 * * * * * * 1400 0 0 D 44 * * 1501 629 * * * * * * * * * * * * * * * * 44 0 * * * * * * 1400 0 0 Q 45 * * * * * * * * * * * * * 678 1416 * * * * * 45 0 * * * * * * 1400 0 0 Q 46 * * 2743 2750 * * * * * * * * * 511 * * * * * * 46 0 * * * * * * 1400 0 0 R 47 * * * * * * * 1416 2643 * 2750 * * * 2582 * 2743 * * * 47 0 * * * * * * 1400 0 0 L 48 * * * * 2424 * * * * 678 * * * 2407 * * * * * * 48 0 * * * * * * 1400 0 0 I 49 * * * * * * * 301 * 2407 * * * * * * * * * * 49 0 * * * * * * 1400 0 0 D 50 * * 2582 * * * 2643 * * * * * * 2743 934 * * * * * 50 0 * * * * * * 1400 0 0 Q 51 * * * * * * * * * * * * * 0 * * * * * * 51 0 * * * * * * 1400 0 0 V 52 * * * * * * * 1416 * * * * * * * * * 678 * * 52 0 * * * * * * 1400 0 0 E 53 * * * 0 * * * * * * * * * * * * * * * * 53 0 * * * * * * 1400 0 0 G 54 2407 * 2643 * * 618 * * * * * * * * * * * * * * 54 0 * * * * * * 1400 0 0 A 55 0 * * * * * * * * * * * * * * * * * * * 55 0 * * * * * * 1400 0 0 L 56 * * * * * * * * * 0 * * * * * * * * * * 56 0 * * * * * * 1400 0 0 Y 57 1416 * 1692 2750 * * * * * * * * * * * * * * * 2582 57 0 * * * * * * 1400 0 0 E 58 * * * 2582 * 264 * * * * * * * * * * * * * * 58 0 * * * * * * 1400 0 0 V 59 * * * * * * * * * * * * * * * * * 0 * * 59 0 * * * * * * 1348 0 0 K 60 * * * * * * * * 0 * * * * * * * * * * * 60 0 * * * * * * 1164 0 0 P 61 * * * * * * * * * * * * 0 * * * * * * * 61 0 * * * * * * 1164 0 0 D 62 * * 0 * * * * * * * * * * * * * * * * * 62 0 * * * * * * 1164 0 0 A 63 0 * * * * * * * * * * * * * * * * * * * 63 0 * * * * * * 1164 0 0 S 64 * * * * * * * * * * * * * * * 0 * * * * 64 0 * * * * * * 1164 0 0 I 65 * * * * * * * 983 * * * * * * * * * 1017 * * 65 0 * * * * * * 1164 0 0 P 66 * * * * * * * * * * * * 0 * * * * * * * 66 0 * * * * * * 1164 0 0 D 67 * * 0 * * * * * * * * * * * * * * * * * 67 0 * * * * * * 1164 0 0 D 68 * * 983 * * * 2040 * * * * * * * * * * * * 1994 68 0 * * * * * * 1164 0 0 D 69 * * 0 * * * * * * * * * * * * * * * * * 69 0 * * * * * * 1164 0 0 T 70 * * * * * * * * * * * * * * 2017 * 409 * * * 70 0 * * * * * * 1164 0 0 E 71 * * * 0 * * * * * * * * * * * * * * * * 71 0 * * * * * * 1164 0 0 L 72 * * * * * * * * * 0 * * * * * * * * * * 72 0 * * * * * * 1164 0 0 L 73 * * * * * * * * * 0 * * * * * * * * * * 73 0 * * * * * * 1164 0 0 R 74 * * * * * * * * * * * * * * 0 * * * * * 74 0 * * * * * * 1164 0 0 D 75 * * 1950 * * * * * * * * * * 432 * * * * * * 75 0 * * * * * * 1164 0 0 Y 76 * * * * * * * * * * * * * * * * * * * 0 76 0 * * * * * * 1164 0 0 V 77 * * * * * * * * * * * * * * * * * 0 * * 77 0 * * * * * * 1164 0 0 K 78 * * * * * * * * 409 * * * * 2017 * * * * * * 78 0 * * * * * * 1164 0 0 K 79 * * * * * * * * 0 * * * * * * * * * * * 79 0 * * * * * * 1164 0 0 L 80 * * * * * * * * * 0 * * * * * * * * * * 80 0 * * * * * * 1164 0 0 L 81 * * * * * * * * * 0 * * * * * * * * * * 81 0 * * * * * * 1164 0 0 K 82 * * * * * * * * 983 * * * * * 1017 * * * * * 82 0 * * * * * * 1164 0 0 H 83 * * * * * * 0 * * * * * * * * * * * * * 83 0 * * * * * * 1164 0 0 P 84 * * * * * * * * * * * * 0 * * * * * * * 84 0 * * * * * * 1164 0 0 R 85 * * * * * * * * * * * * * * 0 * * * * * 85 0 * * * * * * 1164 0 0 Q 86 * * * * * * 1000 * * * * * * 1000 * * * * * * 86 0 * * 0 * * * 1110 0 0 //