 |
| Job Description | P31667 | | Confidence | 36.29% | Date | Thu Jan 5 11:48:30 GMT 2012 |
| Rank | 39 | Aligned Residues | 21 |
| % Identity | 14% | Template | d1ku2a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma3 domain
|
| Resolution | 2.90 |
|
|   |   |
272 | . | . | . | . | . | . | . | 280 | . | |
|
. | . | . | . | . | . | . | . | 290 | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | L | A | D | I | M | R | F | T | G | . |
. |
L | S | E | E | E | L | A | A | A | S | Q |
| Query Conservation |   |
  |   |
|   |
|
|   |   |
|
| . | . |
|
|   |
|
|
|
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |
| Template Sequence |   |
S | Y | E | E | I | A | E | A | M | G | P | G | W | D | A | K | R | V | E | E | T | L | K |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  | G | G |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|