Phyre 2 alignment of P0A8U0 with c1z5sD_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A8U0
Confidence | 30.02% | Date | Thu Jan 5 11:08:44 GMT 2012
Rank | 7 | Aligned Residues | 19
% Identity | 53% | Template | c1z5sD_
PDB info | PDB header:ligase | Chain: D: PDB Molecule:ran-binding protein 2; | PDBTitle: crystal structure of a complex between ubc9, sumo-1,2 rangap1 and nup358/ranbp2
Resolution | 3.01 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 124 | . | . | . | . | . | 130 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | K | R | L | K | L | P | P | T | L | F | I | . | . | . | . | . | A | T | L | E | E | E | L | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | K | L | K | L | P | P | T | F | F | C | Y | K | N | R | P | D | Y | V | S | E | E | E | E
Template Known Secondary structure |  |  |  | T | T |  |  | S | S | S | T | T | T | T | T | S | S | S | S |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2649 | 2650 | . | . | . | . | . | . | . | . | . | 2660 | . | . | . | . | . | . | . | . | . | 2670 | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions