Phyre 2 alignment of P0A8U0 with d1ub4c_

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Job Description | P0A8U0
Confidence | 4.91% | Date | Thu Jan 5 11:08:44 GMT 2012
Rank | 62 | Aligned Residues | 38
% Identity | 26% | Template | d1ub4c_
SCOP info | Double-split beta-barrel | AbrB/MazE/MraZ-like | Kis/PemI addiction antidote
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | E | E | E | L | E | V | I | S | V | C | N | L | S | G | E | V | C | K | E | T | L | G | T | R | K | R | T | H | L | A | S | N | L | A | E | F | L | N | Q | L | K | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | N | I | D | D | E | V | K | . | I | D | L | V | D | G | K | L | I | I | E | P | V | R | K | E | P | V | . | . | . | . | F | T | L | A | E | L | V | N | D | I | T | P
Template Known Secondary structure |  |  |  | T | T |  |  |  |  | . |  |  |  | B | T | T | B |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 427 | . | . | 430 | . | . | . | . |  | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . |  |  |  |  | . | . | . | . | . | . | . | 460 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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