Phyre 2 alignment of P0A8U0 with c2j04C_

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Job Description | P0A8U0
Confidence | 6.61% | Date | Thu Jan 5 11:08:44 GMT 2012
Rank | 41 | Aligned Residues | 46
% Identity | 13% | Template | c2j04C_
PDB info | PDB header:transcription | Chain: C: PDB Molecule:hypothetical protein ypl007c; | PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic
Resolution | 3.2 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | P | T | L | F | I | A | T | L | E | E | E | L | E | V | I | S | V | C | N | L | S | G | E | V | C | K | E | T | L | G | T | R | K | R | T | H | L | A | S | N | L | A | E | F | L | N | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | F | H | I | I | P | L | N | H | E | K | E | S | T | I | L | L | M | S | N | K | T | S | Y | K | V | L | . | . | L | E | D | E | L | H | V | T | A | D | N | I | I | A | P | Y | L | E | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | . | . |  | S | S | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . |  |  | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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