Phyre 2 alignment of P0A8U0 with d1pyya4

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Job Description | P0A8U0
Confidence | 4.64% | Date | Thu Jan 5 11:08:44 GMT 2012
Rank | 65 | Aligned Residues | 35
% Identity | 11% | Template | d1pyya4
SCOP info | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | beta-Lactamase/D-ala carboxypeptidase
Resolution | 2.42

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | V | Q | E | N | L | I | G | H | L | V | T | Q | K | R | L | K | L | P | P | T | L | F | I | A | T | L | E | E | E | L | E | V | I | S | V | C | N | L | S | G | E | V | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | L | Q | S | . | . | F | M | E | T | Q | M | D | A | F | Q | E | K | V | K | . | . | . | . | . | . | . | G | K | Y | M | T | A | T | L | V | S | A | K | T | G | E | I | L
Template Known Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  | S |  |  |  |  |  |  |  |  | T | T | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 268 | . | 270 | . |  |  | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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