Phyre 2 Results for P0A8U0

Email | l.a.kelley@imperial.ac.uk
Description | P0A8U0
Date | Thu Jan 5 11:08:44 GMT 2012
Unique Job ID | 34463450d2d53420

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3ffvA_ |
|  | 100.0 | 100 | PDB header:protein binding Chain: A: PDB Molecule:protein syd; PDBTitle: crystal structure analysis of syd
2 | c3d5pB_ |
|  | 97.7 | 13 | PDB header:gene regulation Chain: B: PDB Molecule:putative glucan synthesis regulator of smi1/knr4 family; PDBTitle: crystal structure of a putative glucan synthesis regulator of2 smi1/knr4 family (bf1740) from bacteroides fragilis nctc 9343 at 1.453 a resolution
3 | d2prva1 |
|  | 97.1 | 10 | Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like
4 | d2icga1 |
|  | 96.2 | 11 | Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like
5 | d2paga1 |
|  | 83.0 | 15 | Fold:SMI1/KNR4-like Superfamily:SMI1/KNR4-like Family:SMI1/KNR4-like
6 | c1hf9B_ |
|  | 32.2 | 26 | PDB header:atpase inhibitor Chain: B: PDB Molecule:atpase inhibitor (mitochondrial); PDBTitle: c-terminal coiled-coil domain from bovine if1
7 | c1z5sD_ |
|  | 30.0 | 53 | PDB header:ligase Chain: D: PDB Molecule:ran-binding protein 2; PDBTitle: crystal structure of a complex between ubc9, sumo-1,2 rangap1 and nup358/ranbp2
8 | c3o27B_ |
|  | 28.5 | 5 | PDB header:dna binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the crystal structure of c68 from the hybrid virus-plasmid pssvx
9 | d2bv3a4 |
|  | 23.6 | 17 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V
10 | c2wryA_ |
|  | 20.1 | 22 | PDB header:immune system Chain: A: PDB Molecule:interleukin-1beta; PDBTitle: crystal structure of chicken cytokine interleukin 1 beta
11 | d1e2wa2 |
|  | 19.3 | 15 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
12 | d1ci3m2 |
|  | 17.2 | 10 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
13 | c3kepA_ |
|  | 16.4 | 17 | PDB header:protein transport, rna binding protein Chain: A: PDB Molecule:nucleoporin nup145; PDBTitle: crystal structure of the autoproteolytic domain from the2 nuclear pore complex component nup145 from saccharomyces3 cerevisiae
14 | c1q2lA_ |
|  | 14.3 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:protease iii; PDBTitle: crystal structure of pitrilysin
15 | c2jbuB_ |
|  | 13.9 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:insulin-degrading enzyme; PDBTitle: crystal structure of human insulin degrading enzyme2 complexed with co-purified peptides.
16 | c3dx5A_ |
|  | 12.2 | 16 | PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis
17 | c2wk3A_ |
|  | 11.7 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:insulin degrading enzyme; PDBTitle: crystal structure of human insulin-degrading enzyme in2 complex with amyloid-beta (1-42)
18 | d1j83a_ |
|  | 11.5 | 31 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 17 carbohydrate binding module, CBM17
19 | c3lgeF_ |
|  | 11.4 | 11 | PDB header:lyase/protein binding Chain: F: PDB Molecule:sorting nexin-9; PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
20 | c3lgeG_ |
|  | 11.4 | 11 | PDB header:lyase/protein binding Chain: G: PDB Molecule:sorting nexin-9; PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
21 | c3d22A_ |
| not modelled | 11.2 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin h-type; PDBTitle: crystal structure of a poplar thioredoxin h mutant,2 pttrxh4c61s
22 | d1ilr1_ |
| not modelled | 10.9 | 30 | Fold:beta-Trefoil Superfamily:Cytokine Family:Interleukin-1 (IL-1)
23 | c1m45B_ |
| not modelled | 10.6 | 25 | PDB header:cell cycle protein Chain: B: PDB Molecule:iq2 motif from myo2p, a class v myosin; PDBTitle: crystal structure of mlc1p bound to iq2 of myo2p, a class v2 myosin
24 | c2j57J_ |
| not modelled | 10.5 | 18 | PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin.
25 | d2a6qb1 |
| not modelled | 10.5 | 14 | Fold:YefM-like Superfamily:YefM-like Family:YefM-like
26 | d1st9a_ |
| not modelled | 10.4 | 34 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
27 | d8i1ba_ |
| not modelled | 10.1 | 30 | Fold:beta-Trefoil Superfamily:Cytokine Family:Interleukin-1 (IL-1)
28 | d2bg1a1 |
| not modelled | 10.1 | 17 | Fold:beta-lactamase/transpeptidase-like Superfamily:beta-lactamase/transpeptidase-like Family:beta-Lactamase/D-ala carboxypeptidase
29 | c2kllA_ |
| not modelled | 10.0 | 33 | PDB header:cytokine Chain: A: PDB Molecule:interleukin-33; PDBTitle: solution structure of human interleukin-33
30 | c2hlwA_ |
| not modelled | 9.2 | 15 | PDB header:ligase, signaling protein Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 1; PDBTitle: solution structure of the human ubiquitin-conjugating2 enzyme variant uev1a
31 | c2a7oA_ |
| not modelled | 8.9 | 16 | PDB header:transcription Chain: A: PDB Molecule:huntingtin interacting protein b; PDBTitle: solution structure of the hset2/hypb sri domain
32 | d1smya1 |
| not modelled | 8.8 | 24 | Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain
33 | d1md6a_ |
| not modelled | 8.0 | 17 | Fold:beta-Trefoil Superfamily:Cytokine Family:Interleukin-1 (IL-1)
34 | d2v0ea1 |
| not modelled | 7.8 | 16 | Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like
35 | c3psiA_ |
| not modelled | 7.6 | 11 | PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)
36 | d1tu2b2 |
| not modelled | 7.6 | 26 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
37 | c2nogA_ |
| not modelled | 7.1 | 6 | PDB header:dna binding protein Chain: A: PDB Molecule:iswi protein; PDBTitle: sant domain structure of xenopus remodeling factor iswi
38 | c3kh7A_ |
| not modelled | 7.0 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of the periplasmic soluble domain of reduced ccmg2 from pseudomonas aeruginosa
39 | c3iu6A_ |
| not modelled | 6.8 | 9 | PDB header:transcription Chain: A: PDB Molecule:protein polybromo-1; PDBTitle: crystal structure of the sixth bromodomain of human poly-bromodomain2 containing protein 1 (pb1)
40 | c2jciA_ |
| not modelled | 6.8 | 17 | PDB header:drug-binding protein Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: structural insights into the catalytic mechanism and the2 role of streptococcus pneumoniae pbp1b
41 | c2j04C_ |
| not modelled | 6.6 | 13 | PDB header:transcription Chain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic
42 | d1qy9a1 |
| not modelled | 6.1 | 20 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
43 | d1ii2a2 |
| not modelled | 6.0 | 32 | Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain
44 | c3uinD_ |
| not modelled | 5.9 | 70 | PDB header:ligase/isomerase/protein binding Chain: D: PDB Molecule:e3 sumo-protein ligase ranbp2; PDBTitle: complex between human rangap1-sumo2, ubc9 and the ir1 domain from2 ranbp2
45 | d1wb9a3 |
| not modelled | 5.6 | 20 | Fold:Ribonuclease H-like motif Superfamily:DNA repair protein MutS, domain II Family:DNA repair protein MutS, domain II
46 | d1zyma2 |
| not modelled | 5.6 | 14 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
47 | d1yrva1 |
| not modelled | 5.5 | 21 | Fold:UBC-like Superfamily:UBC-like Family:UBC-related
48 | c3b79A_ |
| not modelled | 5.5 | 20 | PDB header:nucleotide binding protein Chain: A: PDB Molecule:toxin secretion atp-binding protein; PDBTitle: crystal structure of the n-terminal peptidase c39 like2 domain of the toxin secretion atp-binding protein from3 vibrio parahaemolyticus
49 | c1n2dC_ |
| not modelled | 5.5 | 25 | PDB header:cell cycle Chain: C: PDB Molecule:iq2 and iq3 motifs from myo2p, a class v myosin; PDBTitle: ternary complex of mlc1p bound to iq2 and iq3 of myo2p, a2 class v myosin
50 | c2o3oD_ |
| not modelled | 5.5 | 23 | PDB header:signaling protein Chain: D: PDB Molecule:yyci protein; PDBTitle: crystal structure of the sensor histidine kinase regulator yyci from2 bacillus subtitlis
51 | d1tf5a1 |
| not modelled | 5.4 | 22 | Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA
52 | c1mzwB_ |
| not modelled | 5.4 | 38 | PDB header:isomerase Chain: B: PDB Molecule:u4/u6 snrnp 60kda protein; PDBTitle: crystal structure of a u4/u6 snrnp complex between human2 spliceosomal cyclophilin h and a u4/u6-60k peptide
53 | c2wadB_ |
| not modelled | 5.3 | 17 | PDB header:peptide binding protein Chain: B: PDB Molecule:penicillin-binding protein 2b; PDBTitle: penicillin-binding protein 2b (pbp-2b) from streptococcus2 pneumoniae (strain 5204)
54 | d2olua2 |
| not modelled | 5.2 | 8 | Fold:beta-lactamase/transpeptidase-like Superfamily:beta-lactamase/transpeptidase-like Family:beta-Lactamase/D-ala carboxypeptidase
55 | c1ezaA_ |
| not modelled | 5.2 | 14 | PDB header:phosphotransferase Chain: A: PDB Molecule:enzyme i; PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure
56 | c1qy9B_ |
| not modelled | 5.1 | 19 | PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ydde; PDBTitle: crystal structure of e. coli se-met protein ydde
57 | d2gw6a1 |
| not modelled | 5.1 | 22 | Fold:Restriction endonuclease-like Superfamily:tRNA-intron endonuclease catalytic domain-like Family:tRNA-intron endonuclease catalytic domain-like
58 | d1s1qa_ |
| not modelled | 5.1 | 19 | Fold:UBC-like Superfamily:UBC-like Family:UEV domain
59 | c3udiA_ |
| not modelled | 5.1 | 17 | PDB header:penicillin-binding protein/antibiotic Chain: A: PDB Molecule:penicillin-binding protein 1a; PDBTitle: crystal structure of acinetobacter baumannii pbp1a in complex with2 penicillin g