143 c1jscA_ Probab=44.86   E-value=17  Score=14.69  Aligned_columns=137  Identities=9%

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCH-
Q ss_conf             999999999999999874965599981687631-457799999998639651116654342144346650667877885-
Q batch____       164 QELNQLIAAANVWTIKTYGPDRVAGFSPIPAMS-MVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPES-  241 (1246)
Q Consensus       164 DEAld~IA~kl~~~~~~yGp~sI~~~~~~~~~~-~~~~~~~~r~~~~~G~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-  241 (1246)
                      .++++.+++.|..      .++.....+.+... .........|...+|.+.......-+..+..++...|.-...... 
T Consensus       195 ~~~~~~~~~~l~~------ak~pvi~~G~~~~~~~~~~~~l~~lae~~~~pv~~t~~~~~~~~~~~p~~~g~~g~~~~~~  268 (541)
T c1jscA_         195 MQSINKAADLINL------AKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCAT  268 (541)
T ss_dssp             HHHHHHHHHHHHH------CSSEEEEECGGGGSSTTHHHHHHHHHHHTTCCEEECTTTTTSSCTTSTTEEEECSTTSCHH
T ss_pred             HHHHHHHHHHHHC------CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             8899999999860------7973999778766897899999999998089788320007566888874202102457989


Q ss_pred             --HHHHCCCEEEEECCCHHHHCHHHH-----HHHHHHHHCCCEEEEECCCCCHHHHHCCEEECCCCCCHHHH
Q ss_conf             --588539899997688867044789-----99999998698799987997865884073416678828999
Q batch____       242 --ADWYNSSYIIAWGSNVPQTRTPDA-----HFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQGTDSAL  306 (1246)
Q Consensus       242 --~D~~na~~Ii~wG~N~aet~~~~~-----~~~~eAr~rGaKvVvVDPr~t~TA~~AD~WipIRPGTD~AL  306 (1246)
                        .-+.++|+||..|+...+...-.+     ..-.......+++|.||.+.......-..-++|.--....|
T Consensus       269 ~~~~l~~aD~il~iG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~i~~d~~~~l  340 (541)
T c1jscA_         269 ANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNL  340 (541)
T ss_dssp             HHHHHHHCSEEEEESCCCCHHHHSSGGGSSHHHHHHHHTTSCEEEEEESCGGGTTSSSCCSEEEESCHHHHH
T ss_pred             HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCEEEEECCHHHHH
T ss_conf             999986398899978876822025654336521012336786189984893780974465047730799999