81 c3nlcA_ Probab=99.36   E-value=5.8e-12  Score=96.15  Aligned_columns=185  Identities=21%

Q ss_pred             CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99887742018999884999999999998898499996774467735012322056444575525899999999999998
Q batch____         1 MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKR   80 (542)
Q Consensus         1 m~~~~~~~~DViIIGaGiaG~s~A~~La~~Gl~V~LiE~~d~a~GaS~~~~g~i~~g~~~~~~~~~~~~~~~~~~~~l~~   80 (542)
                      .....+...+|+|||||++||++|+.|+++|++|+|||+++..+|.+....+....+......            .....
T Consensus        86 ~~~~~~~~~~~vVVGaG~AGL~AA~~La~~G~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~------------~~~~~  153 (534)
T c3nlcA_          86 AKAPENLTERPIVIGFGPCGLFAGLVLAQXGFNPIIVERGKEVRERTKDTFGFWRKRTLNPES------------NVQFG  153 (534)
T ss_dssp             CCCCTTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTS------------SSSSS
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCC------------CCCCH
T ss_conf             667656688679988968999999999976981999978887564300024555642014334------------44310


Q ss_pred             HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHH
Q ss_conf             70233001885899418989999999999888639873212626765542025555540664165100078886999999
Q batch____        81 IARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD  160 (542)
Q Consensus        81 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (542)
                      .........+.+........ ........+....+.+........                 ...+..........+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~  215 (534)
T c3nlcA_         154 EGGAGTFSDGKLYSQVKDPN-FYGRKVITEFVEAGAPEEILYVSK-----------------PHIGTFKLVTXIEKXRAT  215 (534)
T ss_dssp             TTGGGTTSCCCCCCCSCCTT-CHHHHHHHHHHHTTCCGGGGTBSS-----------------CCCCHHHHHHHHHHHHHH
T ss_pred             HHHCHHCCCCCEEEEHHHHC-CCHHHHHHHHHHCCCCCCCCCCCC-----------------CCCCCCCCHHHHHHHHHH
T ss_conf             11000002575011000101-567899999997699830024785-----------------231322203689999999


Q ss_pred             HHHCCCEEECCCEEEEEEEECCEEEEEEEEECCCCCEEEEECCEEEECCCCCHHHHHHHC
Q ss_conf             987296896183689999939879999887614763123414538988882536678752
Q batch____       161 AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYA  220 (542)
Q Consensus       161 ~~~~G~~~~~~~~v~~l~~~~~~v~~v~~~~~~t~~~~~i~a~~vVnAaG~~a~~l~~~~  220 (542)
                      +...|+.+++++.+..+..++..+..+..     .....+.++.||.|+|..+.....++
T Consensus       216 ~~~~g~~i~~~~~v~~~~~~~~~~~~~~~-----~~~~~i~A~aVIlAtGg~a~~~~~~l  270 (534)
T c3nlcA_         216 IIELGGEIRFSTRVDDLHXEDGQITGVTL-----SNGEEIKSRHVVLAVGHSARDTFEXL  270 (534)
T ss_dssp             HHHTTCEEESSCCEEEEEESSSBEEEEEE-----TTSCEEECSCEEECCCTTCHHHHHHH
T ss_pred             HHHCCCEEEECCEEEECCCCCCEEEEEEE-----CCCEEEECCEEEECCCCCHHHHHHHH
T ss_conf             98689799958786101036640254673-----27608977879982885324678788