75 c1ltxR_ Probab=99.39   E-value=1.3e-11  Score=93.80  Aligned_columns=204  Identities=15%

Q ss_pred             CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH-------------------------------------
Q ss_conf             4201899988499999999999889849999677446773501-------------------------------------
Q batch____         7 QSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGR-------------------------------------   49 (542)
Q Consensus         7 ~~~DViIIGaGiaG~s~A~~La~~Gl~V~LiE~~d~a~GaS~~-------------------------------------   49 (542)
                      .+|||+|||||++|+++|++|+++|++|+|+|+++..+|...-                                     
T Consensus         6 ~~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (494)
T c1ltxR_           6 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPLSS   85 (494)
T ss_dssp             SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEBCS
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             43788999898889999999998798099996788997127998527704321463225654212222234420011332


Q ss_pred             --------------------------HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH----
Q ss_conf             --------------------------23220564445755258999999999999987023300188589941898----
Q batch____        50 --------------------------NHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPED----   99 (542)
Q Consensus        50 --------------------------~~g~i~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~l~~~~~~~----   99 (542)
                                                ............+..+..................-.+......+......    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (494)
T c1ltxR_          86 KDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQV  165 (494)
T ss_dssp             SCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             23333323311114655543122232110100233312134440148889764428565565564442102001402114


Q ss_pred             -------------------------------------------------------HHHHHHHHHHHHHHCCCCCEECCHH
Q ss_conf             -------------------------------------------------------9999999999888639873212626
Q batch____       100 -------------------------------------------------------DLSFQATFIRACEEAGISAEAIDPQ  124 (542)
Q Consensus       100 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  124 (542)
                                                                             .........................
T Consensus       166 p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (494)
T c1ltxR_         166 PCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSTSCTVDGLK  245 (494)
T ss_dssp             CCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSSCCHHHHHHHHTTTSCCCCCBHHHHHH
T ss_pred             CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             58967872165643034443456777752356675886432159688999883899999999999997514788247999


Q ss_pred             HHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHCCCEEECCCEEEEEEE--ECCEEEEEEEEECCCCCEEEEEC
Q ss_conf             7655420255555406641651000788869999999872968961836899999--39879999887614763123414
Q batch____       125 QARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIR--EGATVCGVRVRNHLTGETQALHA  202 (542)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~v~~l~~--~~~~v~~v~~~~~~t~~~~~i~a  202 (542)
                      ................+.++.+....  +...+.+.....|+.+.++++|..|..  ++..+.++..     .....+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~gG~~~--l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~-----~~g~~~~a  318 (494)
T c1ltxR_         246 ATKKFLQCLGRYGNTPFLFPLYGQGE--LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID-----QFGQRIIS  318 (494)
T ss_dssp             HHHHHHTTTTSSSSSSEEEETTCTTH--HHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEE-----TTCCEEEC
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCHHH--HHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEE-----CCCCEEEE
T ss_conf             99999999653066855886488789--999999997404870883042269998388976999993-----79839990


Q ss_pred             CEEEECCCCCHHHHH
Q ss_conf             538988882536678
Q batch____       203 PVVVNAAGIWGQHIA  217 (542)
Q Consensus       203 ~~vVnAaG~~a~~l~  217 (542)
                      +.||.++..+.....
T Consensus       319 ~~VI~a~~~~~~~~~  333 (494)
T c1ltxR_         319 KHFIIEDSYLSENTC  333 (494)
T ss_dssp             SEEEEEGGGBCTTTT
T ss_pred             CEEEECCCCCCHHHH
T ss_conf             789986840363643