120 c1chuA_ Probab=99.20   E-value=1.5e-09  Score=80.31  Aligned_columns=146  Identities=23%

Q ss_pred             CCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH----CCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             887742018999884999999999998898499996774467735012322----0564445755258999999999999
Q batch____         3 TRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGL----LHSGARYAVTDAESARECISENQIL   78 (542)
Q Consensus         3 ~~~~~~~DViIIGaGiaG~s~A~~La~~Gl~V~LiE~~d~a~GaS~~~~g~----i~~g~~~~~~~~~~~~~~~~~~~~l   78 (542)
                      +.-..++||+|||+|++|+++|++|++.| +|+||||+..+++.+.-+-..    +.....+.......-..+....+.+
T Consensus         2 ~~~~~~~DViVIG~G~AGl~AA~~a~~~g-~V~viekg~~~~~~~~ds~~~~~~d~~~~~~~~~d~~lv~~~~~~a~~~i   80 (478)
T c1chuA_           2 TLPEHSCDVLIIGSGAAGLSLALRLADQH-QVIVLSKGPVTEFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCV   80 (478)
T ss_dssp             BCCSEECSEEEECCSHHHHHHHHHHTTTS-CEEEECSSCTTCCCSHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf             87861001789899689999999998729-89999568626668878999999989985278888899999998468999


Q ss_pred             HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHH
Q ss_conf             98702330018858994189899999999998886398732126267655420255555406641651000788869999
Q batch____        79 KRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANM  158 (542)
Q Consensus        79 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (542)
                      ..+....+.-.                                                                  .+.
T Consensus        81 ~~l~~~Gv~~~------------------------------------------------------------------~~~   94 (478)
T c1chuA_          81 QWLIDQGVLTT------------------------------------------------------------------LVS   94 (478)
T ss_dssp             HHHHHTTCCCC------------------------------------------------------------------CHH
T ss_pred             HHHHHCCCCHH------------------------------------------------------------------HHH
T ss_conf             99998698236------------------------------------------------------------------789


Q ss_pred             HHHHHCCCEEECCCEEEEEEEECC-------EEEEEEEEECCCCCEEEEECCEEEECCCCCHHH
Q ss_conf             999872968961836899999398-------799998876147631234145389888825366
Q batch____       159 LDAKEHGAVILTAHEVTGLIREGA-------TVCGVRVRNHLTGETQALHAPVVVNAAGIWGQH  215 (542)
Q Consensus       159 ~~~~~~G~~~~~~~~v~~l~~~~~-------~v~~v~~~~~~t~~~~~i~a~~vVnAaG~~a~~  215 (542)
                      ......+..++..+.+..+.....       .+.++...+..++....+.++.||+|+|.+...
T Consensus        95 ~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~VIlAtGg~~~~  158 (478)
T c1chuA_          95 KALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV  158 (478)
T ss_dssp             HHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred             HHHHCCCCEEEECCEEEEEEECCCEEEEECCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC
T ss_conf             8850149378627668887613743553011022114687479829998136653457865444