15/01/2012 00:45:31 : INFO  : Run start: Sun Jan 15 00:45:29 GMT 2012
15/01/2012 00:45:41 : INFO  : Initialised job
15/01/2012 00:45:44 : INFO  : Renaming log file 'phyre2_20120115_004528.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/phyre_20120115_004528.log'
15/01/2012 00:45:46 : INFO  : Initialised job:
Sequence
>batch____
MDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQELKNYLKLNVKEKNIQIADQVIID
ETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNYAFIRPGTIISNGVKIGFATEIKNAV
IEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYI
GQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD

15/01/2012 00:45:48 : INFO  : Checked sequence
15/01/2012 00:45:54 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 00:45:56 : INFO  : PSI-BLAST 3 iterations
15/01/2012 00:47:18 : INFO  : PSI-BLAST 5 iterations
15/01/2012 00:49:21 : INFO  : Finished PSI-BLAST
15/01/2012 00:49:25 : INFO  : Running Buildali to generate a3m file
15/01/2012 00:58:30 : INFO  : Converting to HMM
15/01/2012 00:58:34 : INFO  : Calibrating HMM
15/01/2012 00:58:50 : INFO  : Searching HMM database
15/01/2012 01:03:12 : INFO  : Finished buildali
15/01/2012 01:03:14 : INFO  : Predicting secondary structure
15/01/2012 01:03:27 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 01:03:30 : INFO  : Predicting Disordered regions
15/01/2012 01:03:37 : INFO  : Predicted Disorder (Disopred)
15/01/2012 01:03:40 : INFO  : Running memsat_svm check
15/01/2012 01:08:12 : INFO  : Globular protein
15/01/2012 01:08:14 : INFO  : Predicted Transmembrane (memsat_svm) ID '337f6db310112e43'
15/01/2012 01:08:16 : INFO  : Initialising fold library search
15/01/2012 01:08:22 : INFO  : Initialised search input
15/01/2012 01:08:25 : INFO  : Building Ensemble models
15/01/2012 01:08:30 : INFO  : Building hh.c1hm8A_.model.1.pdb
15/01/2012 01:08:54 : INFO  : Building hh.c3i3aC_.model.2.pdb
15/01/2012 01:09:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/hh.c3i3aC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/c3i3aC_.2.pdb
15/01/2012 01:09:19 : INFO  : Building hh.c2iu9C_.model.3.pdb
15/01/2012 01:09:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/hh.c2iu9C_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/c2iu9C_.3.pdb
15/01/2012 01:09:44 : INFO  : Building hh.c2v0hA_.model.4.pdb
15/01/2012 01:10:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/hh.c2v0hA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/c2v0hA_.4.pdb
15/01/2012 01:10:11 : INFO  : Building hh.d1j2za_.model.5.pdb
15/01/2012 01:10:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/hh.d1j2za_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/d1j2za_.5.pdb
15/01/2012 01:10:34 : INFO  : Building hh.c3pmoA_.model.6.pdb
15/01/2012 01:10:52 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/hh.c3pmoA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/337f6db310112e43/c3pmoA_.6.pdb
15/01/2012 01:10:58 : INFO  : Building c1hm8A_.1.pdb
15/01/2012 01:11:21 : INFO  : Building c3i3aC_.2.pdb
15/01/2012 01:11:43 : INFO  : Building c2iu9C_.3.pdb
15/01/2012 01:12:04 : INFO  : Building c2v0hA_.4.pdb
15/01/2012 01:12:26 : INFO  : Building d1j2za_.5.pdb
15/01/2012 01:12:49 : INFO  : Building c3pmoA_.6.pdb
15/01/2012 01:13:12 : INFO  : Building c3eh0C_.7.pdb
15/01/2012 01:13:35 : INFO  : Building d2jf2a1.8.pdb
15/01/2012 01:13:57 : INFO  : Building c3r0sA_.9.pdb
15/01/2012 01:14:20 : INFO  : Building c2oi6A_.10.pdb
15/01/2012 01:14:44 : INFO  : Building c2ggqA_.11.pdb
15/01/2012 01:15:06 : INFO  : Building c1yp3C_.12.pdb
15/01/2012 01:15:30 : INFO  : Building c3fsbB_.13.pdb
15/01/2012 01:15:52 : INFO  : Building d1qrea_.14.pdb
15/01/2012 01:16:16 : INFO  : Building c1qreA_.15.pdb
15/01/2012 01:16:39 : INFO  : Building d2oi6a1.16.pdb
15/01/2012 01:17:04 : INFO  : Building c3mqhD_.17.pdb
15/01/2012 01:17:28 : INFO  : Building c3d98A_.18.pdb
15/01/2012 01:17:53 : INFO  : Building d1g97a1.19.pdb
15/01/2012 01:18:16 : INFO  : Building c2qkxA_.20.pdb
15/01/2012 01:21:06 : INFO  : Finished HH model building
15/01/2012 01:21:08 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 01:22:27 : INFO  : html domain output complete ID '337f6db310112e43'
15/01/2012 01:51:41 : INFO  : Run end  : Sun Jan 15 01:51:40 GMT 2012
