Content-Type: text/html

Reference sequence (query): batch____
Identities normalised by aligned length.
Colored by: property
HSP processing: ranked
Search cycle: 2
                                                                                             1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         . ] 212
   batch____                                       bits   E-value  N 100.0%  1:212             MKLSMKSLAALLMMLNGAVMASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHFGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRTVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK    
 1 UniRef50_P18473 Periplasmic protein trbC n=...   220     3e-56  1 100.0%  1:212   1:212     MKLSMKSLAALLMMLNGAVMASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHFGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRTVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK    
 2 UniRef50_A4TT00 Conjugative transfer protei...   185     8e-46  1  51.6% 19:206  65:252     ------------------CTALASGADEANSEFIRQQESFSQQLRGQDNAPLRQILEQQVRQNPLSADDARFIGELKQRQRENLQDKPTHGALYFVSFAIPQAGLKRMLTEARRYDIPATLRGMVNNDMKTTATAVMALVQDGSASGVAIDPTRFREYGITSVPSLVVYCEASHDVIRGNIHLKQALEKVVEKGECRDEAQQLLNK------    
 3 UniRef50_C8QEB4 Type-F conjugative transfer...   180     3e-44  1  35.4%  1:212   1:207     MKTFLMTALMLSAVFPCAatAVQPVVSGDDMAYMKQQQRDLELFKSQLQGM-----NITLPAAQEGRVAQLQNDIAASQADQNSASRTTPAAIYFVSLGIPEEGLLPMLADARRFGIPATLRGLLDNDFRKTASAMFELSKKDKQAGVQIDPTLYQQFGIKAVPALVVTCGGKFDVLYGSLPVKQALEEVKQRGDCAGIAAQLLKN-GEAAR    
 4 UniRef50_A4WGT4 Putative uncharacterized pr...   172     8e-42  1  38.0%  1:208   1:206     MHNTLFRALLLSVLFGGAQTveQASVSASDMAWMKQQQQPLDSLKQRLQGQTMSLPAEQ------QALISRLQGDLARQQAERESGEKRtpAMYFVSLGLPREGLLPMLKEANRYGVPATLRGLVNNDLRQTASAMFELAKEDKNIGVQIDPTLYTEYHITTIPALVVTCPGRFDVIRGSLPLKQALEKVAESGDCAATAKQILEDGK----    
 5 UniRef50_B6ICG3 TrbC protein n=1 Tax=Escher...   167     2e-40  1  40.9%  3:205   5:197     --VSVCSIAMTCMLSPGIVCASQ------------DSAAFIESLRDQSDMLRRQATVPEFLQQPAPGknDAWIQSLTRKSQQaaRSKKTPRALYFLSFSIPEEGLIRMLPEARALGIPALVNGLIDNDFRKTAEAVFRITREKNTGGVQIDPMQFAKYGITSVPALVVTCGERYDLIRGNIRLKAALERVAKEGECAPVAEAILR-------    
 6 UniRef50_Q6MB92 Putative F pilus assembly p...   165     1e-39  1  28.0% 13:212   1:198     ------------MLLNGGLWGEEMQHFALDSNWLKQAQQVDEKahWLKDHLKERLASENFLRNPLEEKGSQL--ATTQCQSAGMEVKEESPLYVFMSFSLDDRLWVQLSQELEKLGGIFVLRGLPQNSFKELANRIFTLQEQGVRVPIQIHPQLFQRFDIQLVPTIAVTEGEQYDKISGNLSIQGALEKMSLYGETQR-AKFLLQQWKEQQK    
 7 UniRef50_A4SUD7 TrbC protein n=1 Tax=Aeromo...   162     8e-39  1  46.9% 47:206  40:200     ----------------------------------------------SPEQMQQATALGHQANQRQLPENTEWANQLARQRdqTPQGKPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVKGDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPALVVTCNGQYDRIAGNLALREALTKIAESGDCADTAKAILAA------    
 8 UniRef50_Q4LC38 TrbC protein n=2 Tax=Sodali...   159     5e-38  1  48.9% 29:206  25:198     ----------------------------AERAWLREQERRSADLH--VATERPAFLRPQV---PLAPDDQRFIDRLAEKSRQAGDGkpAENAVYFVSFSMPLEGLAAMLQETRRFGIPATLRGMVNNDMRETVQRVMALVKNGGADGVQIDPQPFHAFGIQSVPALVVQCERGFDVIRGNLHIEDGLRRIANDGDCAPVAQALLDK------    
 9 UniRef50_B2VB15 Probable F pilus assembly p...   159     5e-38  1  33.7% 31:208   1:172     ------------------------------MDFMKQKQAELKDFKEKLSGM-----NINIPQSQQSLVDKNS-AEITSQQKQAVEENQEPKFIYFLSFSIPNVGLLSMVNDAKKYGITPTMRGLVNNDFRETAKKSFELSKEDKDFGFIIDPFLFRDYGINAVPAMVITCGEKHDLVYGSLPVKEALGKVAREGDCSEIAKKILAADK----    
10 UniRef50_D0Z538 Conjugative transfer protei...   158     1e-37  1  21.4%  1:206   1:216     MKPAKLALILLCSV--GLPVQAWTEQETHELQRQKEAQAASFFTPDTNTLNIESLLKAKQYKKMAQALNDEANNRIISTQNPNA---APPSVLIFASLNMPSASLKQLLYQANQYRLPVVIRGVLPGGFTQTVNMVQGLvaKKPLGGVSINPIWFKQFNIKQVSAFVVMkpDNYDVVYGNVSVFDALTTLGQRGQYADIANRVIAQ------    
11 UniRef50_Q8KNK6 TrbC n=1 Tax=Salmonella ent...   156     6e-37  1  36.9%  1:206   1:200     MKRVLISLALLLTC--GAGMAS---DHTENRQFIHDQLQLDRQ-------RFRALQTPEFLQQPRppQDQAFLDSQASQFRQAMQprPVDAALVFVSFSMPPDELKQRVKDAAELNIPVVIRGMVNGDMRTTANAGRSGEREQYRRGTDRSNT-FRKYNITAVPVLIVAcgDTVDRLQGDLTLHQALKRVAEEGDCADTARNLLRG------    
12 UniRef50_Q6LW85 Hypothetical conjugative tr...   152     8e-36  1  22.1%  5:208  13:234     ----RIAGLILLSALNCNLTAANTLGYSQTELKALQQREIAIQAPEHAPTLDLdwQNAKQFETDMRTTQHDALSPILKQANIGDNPNSakGVIIFASLTMPSTALKQLMMQSSDLQVPIIIRGVLPQGFPATVAAIQSLidEVINSGMAINPLWFKQLGIQRVPAFAVIKPgdFDVLVGNVSLYDALATLARDGDVPNIAQQVLSRRK----    
13 UniRef50_D0SGX9 Predicted protein n=1 Tax=A...   152     1e-35  1  26.0% 20:211  38:243     -------------------MLNENVFSENNADWQKAQEKAAEQ--RKAFDKVQMPERNSFPNVQVGQFSNIDVQKIAERYKknDEKKTISGVIGFASFSMPDSSLKKLIADTLKVNGTVVFIGFKNNDFKETAKEIRRL--DIRKGNIQINPNAFKQYKVDVVPSIVMVkpENYSKVTGDISVEYALEIMaeKGELQTLANDYLKQVKRGG-    
14 UniRef50_B2I3Z6 Putative uncharacterized pr...   151     2e-35  1  21.2%  1:212   1:235     MKKLILASICLLSCNVHSA------DFPSEQEIKKEMDKVKNQTFKKSDWEmkARKQIEIFKSVEARPNnnLDDIAARYKRKAENKKNVDGILAFASLSMPKDALNKLVTDVTKAGGVVVFRGFKDGNYMEMAKAISQIGVK--SANIQINPNAFKQYRVDSVPAIVLVkpENHSKITGDISLEYALEQmkETAELSQIAKRYLTFLKGANQ    
15 UniRef50_Q7MBM9 Putative conjugative transf...   150     3e-35  1  27.3%  3:207  12:234     --RSLLFLCLVVSLPSQAYTEEELKAFAKLEQELSQQSSATHSFrdQVQNQARAYQQEALDASrqALVKEESLSPLLgqKPTRNPDQAPKGVMVFVSLTMPENALKQLLMQSEHLGVPLVIRGVLTDGFPATAKRIESLikAPIKSGFSISPDWFKQFGITKVPAFVSVKPgdYDILYGNISLYQALDYLA-DGDAQQNVHPLLHTL-----    
16 UniRef50_Q5ZTS7 Putative conjugative transf...   149     5e-35  1  21.5%  1:209   2:221     MKTIRMNTSFLVALF-----LLSFPALAEDEAYIASIEANTKNRANAFTNEIKQIseTSEKSGQIAEFTGEMHQVIKTQEPIVTHLKKVSQVLVFLSFSMPEKSLKAWLLQCKKSGATPVIRGLIHNSFKETMTAIQTLSKKTG-IGMQLDPILFKTFDIAMVPAVVYVKDTpyDSLYGDVSLDYALEKMreQSEDPVLDQMILRLRGE---    
17 UniRef50_B2LS66 Putative conjugative transf...   147     3e-34  1  24.0%  4:207  12:233     ---FALWACALTSPLTHAYTKEELQAFQDIERRLAERPDAAIMAQSKTFHDqhRSEAQQASKAAGLKLNPQSLSPLLDTPSAQTNpqAPKGVMVFVSLTMPDTALTQLLKQSERTGIPLVIRGVLPQGFTATVTRIQTLINQgiRSGFSISPDWFRQFDIQQVPTFVSIKPgdYDVVTGNISLYQALETLAQ-GDTQQEVATLLRAL-----    
18 UniRef50_Q8D692 Putative uncharacterized pr...   146     5e-34  1  22.0%  1:209   1:232     MRSCLIGLLTLfaLANIGYTQNELKALAKLEQQTseQAQQAIETQQQASHEFIEHARQQAMQWQEKLDPSSLQDIIDIPTPTENPNAAPAGVMIFVSLTMPKSSLQALLKQSEIWQVPLVIRGVLPDGFMTTVNNIQSLlkKPINSGFAISPEWFQTFNILEVPTFVAVKPgdYDIVKGNVSLPNALEHLA-NGDNPDVVRQVLQRIKR---    
19 UniRef50_B4EQG7 Putative conjugative transf...   144     1e-33  1  22.7%  3:209  14:232     --VLAIIGLSASIIANAAGTVAAMPSDAQISAERARIERERKPMFADPNLG-RSTAGNAFPAIPTPPRAQLDPLAVAQRYAARAQSRKQEELLAFASLSMPAESLKRLVRDVARAGGAVVLRGFKDGSLKTTVSAIQALGVD--ASAVQVNPNAFKQYRITAVPAIVLVkpANFAGVTGDVTVAYALREIGRrsDYQPLADRILASLGE---    
20 UniRef50_D1RMN4 Type-F conjugative transfer...   141     1e-32  1  28.4% 24:206  15:217     -----------------------TSSHANVNDFLNEASAIGKTAHDSVSQ--DTLAHWNVASNQSIAQNKTLIDQIIEQSrvAQKGQTVDGAVLFVSFSMPESLLFSLSDEAASYKIPVVINGLIEGDFKKTITAFSKLHAKAKEsgVSVDPLWFEQFHITAVPALVVSkeQTYDVVYGNASLKKSLQLIAQKGDSaeVAQALLEN------    
21 UniRef50_A1WDE9 Putative uncharacterized pr...   141     2e-32  1  20.9% 16:211  48:258     ---------------NNPASKAKKGAMPNSADIDREMRRVDRERKQMFDPNNPATKNAafPNVPTPERAGIDIEALAKQYEQKAQARKMDDLMIFASFTMPAESLKRIVSQANRVGASVVLRGFKNNSLKDTALAIKELGEQG--GNVLVNPNAFTKYKVKAVPTMVLAkpDNFVAVAGDVSLDYALDEIVRRApfEAVASRYLRQIRGNQ-    
22 UniRef50_Q5NYF4 Similar to plasmid-like sex...   140     4e-32  1  20.5%  4:208   7:248     ---VLPALPFAVVLAASAQTLAQNPPLVTDADirREQPTISDQDIEQVRQRHRMPSDAELQAAPVPTPPHIdyASQAQEISRAEGLASGPGLLVFVSLSMPQPTLQRLIDQAARAQASIVLRGFADGSLRTTVARVQRLIG-DRQVAVQIDPQAFDRYAVTRVPAFVLVRDGafLRTSGDVSLDYALEYMQRSApfGSAADTFLKRIR----    
23 UniRef50_A5KZG3 Putative uncharacterized pr...   139     6e-32  1  28.1% 36:206  46:225     -----------------------------------HQSELTTLLERGQQHKQEALSMNQHLDNALQDSP---LASVLGVPQENPN-KKAQGVMVFVSLSMPDNALKQLLKQSQQYQVPLVIRGVLPEGMVPTTSRIMHLLeeAIEGGFAISPQWFRQFNITHVPVFVAicPKnyDVVHGNLSLPNAL-TILSQGDVGHIAKQVLNR------    
24 UniRef50_C5ANW6 Putative uncharacterized pr...   137     2e-31  1  19.2%  7:209  45:261     ------ATFDAAASGAARYHGAMPTDTAIDAEMARIQGDRQQQMRDAAAKAAHDGNDFPNLPTPARPAASADPLAIAKRYEGRMQRRVTDSFVAFASFSMPDASLVRLIKTMHIAGGTVVFRGFKDDSLKATAAEMQRLGVA--SGGIVVNPKAFTQYRVSRVPAFVVTQGGdfVSVSGDVTPGYALRQIVDHSPaaANAGRYLRALGD---    
25 UniRef50_C1SHA7 Type-F conjugative transfer...   137     2e-31  1  21.0%  1:210   1:240     MKVILLALFTLCSSFVSAETLKETIDD------IKKSAKPDISLPDNQEMREKAKAFIDTGYDALMNKVSEYKKQIAESNGYEIDKdpDKSLYIFISSSMPEKTLQNYSATARDlgSLLVINGVIgeQIMPTVDFVARISCGKGLAdvDINPYLFRAFNIKSVPAFVhiSEDSYTKIYGDVSVQYALEKFSDSG--ITVAKTMLQKLKQG--    
26 UniRef50_C4Z006 Putative type-F conjugative...   136     5e-31  1  19.1% 13:206  16:216     ------------SVFSTTSLGSFFVVSEKDIEFAEkqAQVQKIVNKGLKEKYQEY--EQISKNTAAAKNDKTLDV---ADTYAFLNDDNTRLRIFVSSSMSLNLLRSYYKEAQRYGGHLVFNGLPKGSFKELLKLAQEIVEGNDIGGLEIDDEAFSSFNAQHVPMIVLSKetQYDSIQGAVSIKYALEEFATRGDMSKEAKQRLER------    
27 UniRef50_B6ESY3 Putative uncharacterized pr...   134     3e-30  1  22.6%  2:200  22:247     -KKMRRLSSALVIVTLSSFTAHSNDGYSNEQLRALQQRevDRAIESSHAMRDKILAMSQQV-NQRITTDALSEGLYFPEPTTNPNANPT-GIIALVSLSMPDIALQQLLIQSEQYQIPLIIRGVLPEGFSATVARINHLLTKdiNSGIAINPQWFTQFNITQVPAFISIKeeDFDVLYGNISMGDALS-ILSKGDAKENA------------    
28 UniRef50_A5VGS0 Type-F conjugative transfer...   133     4e-30  1  25.3% 31:208  52:244     ------------------------------KDRGDQFREEAVAVREAGTENMRQVAAKDLPKGP---DGAIDFDEIVQGAAGNASVkeAPQFIVFASLSMPPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIvrQDEFANVGIDPRLFRAFNVQAVPTYVAVSSdpYDRMTGNVTVEYALSSFAdyGPGARVAAVGLSNMR----    
29 UniRef50_A8QYQ8 TrbC protein n=1 Tax=Fluori...   131     1e-29  1  38.4% 94:205  25:136     ---------------------------------------------------------------------------------------------VFVSFSMPGRLLEETLKESSRLHIPAYLNGLHHNSMKDTALKVMELSQRIPDLNLAIDPTLFERFGIQQVPALVVAEEKKFDVIYGHLTLQEGLSWIAGHGETHFTLHDARR-------    
30 UniRef50_A9L6J7 Type-F conjugative transfer...   131     1e-29  1  28.0% 50:206  56:243     -------------------------------------------------DELKALSMRERHTLPPLNVDQAALFDKARQFEAQSKGqdANGVMVFVSLGMPATSLQQLLMQSADLQVPLIVRGVLPQGFTATVKQMNHLIdkTIQSGFAINPQWFTQFGITQVPAFVAVRpdDFDVIYGNVSLYDALNLLAQHGSIPDVAAKTLAK------    
31 UniRef50_Q0F373 Putative uncharacterized pr...   131     2e-29  1  24.5% 15:210  19:232     --------------FPSDMAMKKTQQAGSDLPSADDVRDAARRARGKlqFNPDRVAVPSFPSLTRQPSVHADFNEVVRNAQKAGLGRDapGLLVFVSFSMPAESLKRLVRQAEQAHAAILLRGLVSdsFRATADAVRR----SGVDGVSINPVAFERFHVSNVPSFVlsCGDGFikISGDVSMDYALRAMkrRPEAQSRADAYLDRLKTG--    
32 UniRef50_A0B4P2 Putative uncharacterized pr...   131     2e-29  1  20.6% 21:209  58:260     --------------------GVMPSSDAIDAEMSRIQGSRDRQMAQAAAKAAHDGNAFPNLPTPAPAAAGADPFAVAKRYESRTQRRVTDSFVAFASFSMPAASLVRLVKTMNQAGGTVVFRGFKNDSLKATAAEMQRLGIA--SGGIVVNPKAFTQYRIARVPAYVVTRGGdyVSLSGDVTPAYALRQIVDHSPtgGIAERYLRALGD---    
33 UniRef50_C5SIL3 Type-F conjugative transfer...   131     2e-29  1  26.2%  1:202   7:233     LKTLACAVGALL-LLSGPTPAQENRFEIEDLVKSAQARSDAMKAdaSTVEKTKRYAQDAIqnRERLRTGLTYLGKQYDIDFFDTEAEVEGGvyVAVSLSMPREALRQLSADAQKAGAVLVIRGFVGGSFKTTRQILLKTFSEEAAAGVLIDPRVFQQYRIDRVPSFVAacEdpFDLVRGNIPLATALKVLAEKGDAAPRAAR----------    
34 UniRef50_Q58AH5 Sex pilus assembly and mati...   129     5e-29  1  19.9% 22:212  25:239     ---------------------AQSLSLPPEAEIQTEMAKHREEAAAVLGQNIktFKVEVPTIKAPPPVRTQSLDDIMQQYAEAKKGGPAPalIIFVSFSMPKPVLTELARQAKETGAVMVVRGFKDGSLKATKLAALEVNRAG--APWEIHPDLFKAFKVTAVPTFVVapETAYSAVAGNMSVELALDTIRRRAqiAKLAENRLAAIRAKNQ    
35 UniRef50_Q1N8Z3 Putative uncharacterized pr...   129     6e-29  1  22.2% 32:207  50:243     -------------------------------DVKRRDQEMKDQAEQIAQHAMTRISDPRLKGAAGDPSGAIDFDELVSGASekGGQGGAPMFMVFASTSMPAESLKPLINHTAAAGGVVVFRGFPGNSAKQFMAKLHEVvkDDTNVRIMVDPRLFRAFNVQVAPTFVVAGSdpSDRMAGNVTVRFALERFveKGPGARTAQVALSNL-----    
36 UniRef50_Q5WRY4 Putative uncharacterized pr...   129     7e-29  1  35.5% 89:209  39:159     ----------------------------------------------------------------------------------------AAQISVLVSFSIPETLLQETLKESAQLNIPAYLNGLYRDSMSETALKVMALSKHIPNLNLAIDPTLFERFGIQQVPAVIVDDGQTFDVIYGHLSIQEGLARMAGRGDVDFTPRDIRRVIGE---    
37 UniRef50_Q3IUV8 TrbC, sex pilus assembly an...   129     7e-29  1  25.3% 22:207  54:249     ---------------------AERRGEALARELTIQPPREGVEIEDLAGIRTRALNDPRVRALLGAPDAEEVAAETRARYGEA-------RAILFASFSMPDTSLRQMMREATAHDLTVVFRGFVNNSVFDTRARLEEVFAEDETgaFGIDPTLFRRFDIRSVPALVVLAEdrHDRVSGNVPLETALRViaGNGEAASVARSLLEQK-----    
38 UniRef50_A3VN15 Putative uncharacterized pr...   127     2e-28  1  27.3% 54:207  64:237     -----------------------------------------------------RWGEAAAPSDTTEPVddAMVADAGVVSAARQETSGPAGVLVFVSFSMPEQSLRQLVLDAHKAQVPVLLQGFVGGSLKETATRMRALLGADTggGVVIDPRAFRIFRVTEVPAFIaaPPPPHDRIAGNMSLGAALSALASEgdAALQARASLKRW-----    
39 UniRef50_C9NPU1 Putative uncharacterized pr...   122     6e-27  1  28.8% 92:209  60:191     -------------------------------------------------------------------------------------------LLVFISLTMPDASLRSLLKQSTQWQAPLLIRGPLPAGFTATAQRLMELLNAkiRAGVAIDPDAFHRFHVRDVPTFVLIkpDDHAKIKGNVSIRTALEALS-TSPLADVAETLLEAQRD---    
40 UniRef50_B4RLR3 TrbC n=9 Tax=Neisseria RepI...   122     1e-26  1  25.1% 17:207  47:247     ----------------GKVTRVKNPNVGDNRQ-QPEIPDLKGIKHRVPD--VRDYGNAKIKADPMSIAQKYRTASQ-----EARQAAEKADLMVFVSFSMPEASLKRIARETAKAGGVMVIRGFKDDSLKATVKAAEEL--AALQGDMLIHPELFDHYGITEVPVTVIARntEHVAVKGDVSLHSALEHLIRESelSDIANAKLAVL-----    
41 UniRef50_Q5NX40 Putative uncharacterized pr...   121     2e-26  1  20.4% 14:209  39:253     -------------LFDKADVKLKDDEAQLRVEGMDSMNKAMRAARALKGTNQLGVTTDAAAKKAAGEKDFSDLNELVKRYeeAAPTNSDGTLMLFVSFSMPPDVIREYSRQAQAAGATLVLRgyKGGTVRRTTE--QAGALNAGGAGWIINPEVFTGYKIDAVPALVLSRdgEYASVFGDISIIGSLEKISqkPEIRQLAAKRLAMIKE---    
42 UniRef50_A8F1T9 Conjugative transfer protei...   121     2e-26  1  26.0% 71:193  35:153     ----------------------------------------------------------------------NVLAEQEELLQEIIQPKTYNQIYIFVSLSMPDSALKSYYIEAEQAGARLVIRGLKNSSFLDTKAKADEI-----NISFDIDPNLFEEYQITSVPAIIvsEGKGVKRLTGHISLHDALEIMNKE-------------------    
43 UniRef50_C5V0C2 Type-F conjugative transfer...   118     1e-25  1  21.9% 19:210  20:217     ------------------QVGAETDMERSNRILKEVTERVVNQYRA-PAPRLDNMPQPAVKASPADMAEQFRQSPIAKQPPVAPE------LMVFVSFSMPRENLLRIVEQSERTGARLIFRGFTGDKLTDMSKRIADLLGSHRVEAV-VHPPAFTQFKVNQVPALVISQSdrYVKVTGDVSQDYALDYIERTSPksTVAATFNSKLQRS--    
44 UniRef50_B3EB54 Type-F conjugative transfer...   118     1e-25  1  18.7%  6:203  79:313     -----MSVPDLANTLAKADQLAERLAIPKSRN-DREMSDLAGTLDssDEFQLRVLSETERIKTEVFGDKVTGYYADKAKKESKGKLTNSERIYVFVSSAMPLQTIRNYAASVSRLgvTLVMRGFVDgkIQPTISFiqEGECEMIPTSLAVDPLLFRRYQIDRVPAVVYARgaDYHTAYGDARLEYLLDQIQRETGSQSLAALL---------    
45 UniRef50_A3WDD8 TrbC, sex pilus assembly an...   116     6e-25  1  21.4% 21:212  40:250     --------------------AAEHAVDAEALavRTKADTLAEDTRAAQQTAFDNRAGYAETAQATANAGPLDLDGMIRAQADAEVAadTPRFIAFASLAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIAAIWSDGDEAglGIDPRLFRAFDIKVTPSFVMIASdpHDRIAGNISVAEVLDTFASGGGPGAQLARLHSRRLEGER    
46 UniRef50_A0R7Q2 Putative uncharacterized pr...   116     6e-25  1  19.8% 12:193  95:313     -----------SMVLPKNAFEKEMQAKAAETIAVYRSPEYQAKLARETARIKREMFHEQLEAIPADRGGAKQVKALAKQEskRARLQDDERIYVFISSSMPMETIRNYAVSAGQYnvVLVMRGFIGgkIGPTTSFVADVlcDMVNTNVLIDPILFRRYGIREVPATVYAKggSFAVAYGDASLEYNLSKIAGS-------------------    
47 UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobac...   115     1e-24  1  25.5%  8:207  16:247     -------LVALMFSVAGGAYAQESPLTEQDKALIEQGKQIAQKAQkqNQHMDEAQAEAKAFFKQLQTTNPT-LKEMHRKQAEKG-IYSDHRILVFASLSLGEQGLDDVLTAVsqPDSVIVFRGIPEgnLGQGVKAIQALakKDPVPNIIINPTLFKTYNITAVPTIVMLEDEpvAQVsgDLGVKGPVEKISE-PDLIDVAKKRLANI-----    
48 UniRef50_A2SNI6 Sex pilus assembly and mati...   114     3e-24  1  23.2% 58:208  50:219     ---------------------------------------------------------PDAAGKKRDTPTGDNLEELVSKYNSALRGDAPKAvvVFVSLSMPKEVLTELSRQAKEMGAMLVLRGFKDGSVDKTRIAAQEVNPSG--APWEIHPDLFKAFKVNKVPTIVlaPEATYGSVSGNVSLELALNTLRLRgdIAKLAELRLADLR----    
49 UniRef50_Q1MY34 Putative uncharacterized pr...   114     3e-24  1  17.6% 16:208  36:244     ---------------SKEMTQNALKHERNTEIYREEIQRANQFFSKYENHANKETLGQAIESnnELMDDHFNSDTQAEAKDARA---IETNILIFVSFSMDVSDIFSLAKDAHDIGGHVVLNGFKK-DLETTLKIISEmtRADKPLPFLIDPTLFDRFSVQSVPHYVlvCHKPRSiaSGLVPIKYFLE-LAERNENSDVVEGLDEWIK----    
50 UniRef50_B0RKU4 Sex pilus assembly and mati...   113     3e-24  1  20.8%  1:192   1:222     MKKLLITISLALTA---------NLVHAQNIAISPEMMNAAQSahRVNNKEMNSFAENIASYSKSSEFKqaGLDPDKQQHEERPEL-VKDQLVLFVSSSMPIHTLRNYARDLSKVGGVMVLRGAVGGISrdTMKLSREIlcKMWSTQVLIDPVLFKQYDIKVVPALIFQPdkAETIIYGDASIAKMLEAMNR--------------------    
51 UniRef50_Q2LU04 Hypothetical cytosolic prot...   113     4e-24  1  22.7% 24:195  85:275     -----------------------NIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAEIERLK-GTVFKDTIDSYYGDSNGAEKDSvnERIYLFISSSVPIGTLRNYARDLDRLGDpmVLQGFVGgrVKPTMDFVRKIITEDADCDIqiDPLLFRKYGITRVPAAVYVP----DVRIMDVTLSEGMEGNAKTGD-----------------    
52 UniRef50_A0L2Z3 Putative uncharacterized pr...   113     5e-24  1  16.3%  2:203   8:235     -RQFLVSLFVAVSMSAIYFDAMATDDNQqiLDAKRQMDDVRSQIerQNNTQQPQGGLPAAWGQQSYISQAQMLTQQADAIRYQVLPKPEpeVFIFASFGMPAYTLKSALRAASQSQvtVVFRGLKDEslRDASNAIHRAIDedVTPRVIIDPRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFveGLLQSGSLGKLSDTY---------    
53 UniRef50_A7H3K1 Putative uncharacterized pr...   112     5e-24  1  14.0% 18:203  80:304     -----------------NQSAESNKSAKVISDMRRSDAFEKKIVDNQNYILYDKSMNFNEYLGEYSQNTKDMINQMENSksTNKYLNPNEKIFIIISSSMDKSSIQNYFkeNVKTDITFVLRGLVGNDArpTFSYLQDLLVKDPNnnIQINPKVTRRFNITKVPAVIFIkdEEYFVAYGEASINYALSEINKQAKSDGLARLI---------    
54 UniRef50_D2TZZ3 Conjugal transfer pilus ass...   112     6e-24  1  35.9% 83:185  55:161     ----------------------------------------------------------------------------------AEEGMPLEGItyFLSSSIPEKTLVPLLKSAQAKGIAVYFNGLIDNSMEKTARYLLNLIQKYQVAGIQVDPLRFDYYGITQVPALVKRCGKDFDIVYGSVALGG---------------------------    
55 UniRef50_C6YK86 Sex pilus assembly protein ...   112     1e-23  1  18.8% 43:202  55:216     ------------------------------------------QEPYPLSDEDKKIVEMSRSILQSVVDGSSEFIEPFSPIEQPASLKHNDEWLIFASSSLGDSSLKQLFKEASATGAIVLFRGIPEG--KTLGAAIRdmVGLDPVPQVRIDPKAFVHWRVTSVPAIFRIEDDKVTASALGVYSKDWLQRQIETGNTGSLGQR----------    
56 UniRef50_B7J843 Pilus assembly protein TraW...   109     5e-23  1  16.8% 14:198  41:232     -------------AAAETEMAVPKSDVQANNILQRYAQQYAPQSASAAQQWLRTRVnpVVPPNLHGKALQEYVDHTLMAKEENA-----AKTLVFISMDMPKAILRKWFAEVADNrtVFVLRGWPDngLPETVSKINRLmsAKKAANVEINPILFTDHKVNIVPVIIHQPggAWSVIVGDGdlQGAIRAINQGKDSPT--------------    
57 UniRef50_A5CC00 Conjugative transfer protei...   109     8e-23  1  30.2% 88:193  23:125     ---------------------------------------------------------------------------------------NQQKTFIFVSFSMSDEALKSYFNDSQKFGAQLVMRGLINNSFTQTKNKTMELG-----ISFDIDPSLFEQYKIDVVPVIVIDDEKrtKKLTGHIPLAIALEIMNEN-------------------    
58 UniRef50_C5F051 Putative uncharacterized pr...   108     1e-22  1  18.8% 29:193  80:284     ----------------------------ESKEAERHAKEIKEYSDSKGFKDLVEQNENHLLYDKEIDWGKYVATPQTEQQMQSTQPKnnDKIFIVISESMPKETILNYFRTLenTDVTFILRGVVGNdiTPTFNYVRDLLIKDKNgqVDINPKVTQKFKIQKVPAVIYisNERYYVAYGDVGIDYALREINKK-------------------    
59 UniRef50_C0QUV1 Putative uncharacterized pr...   108     2e-22  1  20.2% 32:194  62:234     -------------------------------ENLKEVGKFKSLTENKAdsEYKKLGENVNLKLLENIYGKNWLDIRLK-----LEGKPEKKNLIffSTSVPMQTVKNVFLASQKYE-NLEFYGVLRGISKKTWKYLNSLDEAMNNMTVKVNPLIFKAVDAEVVPAFVIacPErkAVLYGDVSLDFAVEKFKEEG------------------    
60 UniRef50_C4YZL4 Type-F conjugative transfer...   106     5e-22  1  27.5% 84:192  15:119     -----------------------------------------------------------------------------------GSIASASNRYIFVSFSMSDEALKAYYRESEELQAILVIRGLVNNNFLDTRQKALDL-----SINFNIDPELFENYHVTSVPVIIEDDktGIKKVSGHIPLSAALELFKQ--------------------    
61 UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteria...   104     2e-21  1  17.7% 21:195 117:301     --------------------QSNNSDAVNDIIRRRDeeAALKAVENKPEVMRGQSKNIEKLFGSSGITAADFERKMDSTREEA--LSTENGITIFASFSLPDYVLEDLLRTASEHKARVVFNGLKKGtlPETQAAINQMIVKGKFEsiTIDPDSFSQYQVTQVPTIISREQARFAKMVGSFNVEFFQRELAKKPD-----------------    
62 UniRef50_D2U0Q6 Conjugative transfer pilus ...   104     2e-21  1  13.9% 24:210  44:243     -----------------------NESALKDIERMREAASAQAKKQESNARQTVNKKNQMILDNASKFKDEEA--RILRQMARDGNGENPKkyYILVSASLDDKEILNIMDMAekENVELVVQGVKDktLVEEVKHWHELIkkEKIINFQIDPNIFIKYKAKTVPTIIHEKDGVMVAVVSGISNPKFLDglGTQGPAKSIVErmLDLIKEG--    
63 UniRef50_A9AU18 Putative uncharacterized pr...   104     2e-21  1  17.5% 71:207  11:156     ----------------------------------------------------------------------FAAAPVHGEPSLSETIAAPWNTYIFVSSRMPLQSIIQVTREASRAHAVIVLTGFAGetLTSTQRYAADINRatQPARWIVDPVLTRRYGVTAAPSFVIAhpGEFSKVAGDMSLSQALKFFAQNSRLPS-ARDYASKL-----    
64 UniRef50_Q8L272 Pilus biogenesis protein n=...   102     8e-21  1  11.2% 23:210  52:248     ----------------------QSDLNELLKIAKQKQAEYEKLSRDTVASSHKRLGEMPVPKTEHDIITDAVTGAIADSDMADGKQNKVTGDFYYvsSSLSDDEIRNIFSQYkrTDVAFVIRGVNDKdlQELTHWQQLVLDAGGGATVNLDPTIFKSYNVTSIPTIIHEKDGELVARVSGISNTGYLKDKKGdgPTKDISEISLLDIIEQ--    
65 UniRef50_Q1NGS4 Hypothetical cytosolic prot...    98     3e-19  1  18.3%  5:206   1:255     ----MLLLAFASLGVASPASATEPPTPTNAQAGPTSMPVPGEAIRRRAFDALGRRGRfaAEHDSMQARLYQALGLAIPDDPATPEPRPTPAnlIFASSSMPISTLRNYAAQLEKAGGVIAFRGVPggPMARLSARVLRlaCAMRNVQLVIDPILFRQHGVARVPAFAMVPGDpsHIVYGDAALSGLMEEYARLgeVSDAASRLSRR------    
66 UniRef50_C1MEJ2 Pilus biogenesis protein n=...    95     2e-18  1  16.1% 27:194  75:248     --------------------------DSLIKAARDNQNVATDQATDTVKDNRKMMGEMPEYKNTDELVDDAVRGALAKSDMTNEKQNKPVgiYILVSASLSDAEITDILKLYdrTDIALVVQGAKDknLLDELTHWQRLSFDSKSsaVNLDPTVFKNYNVSSVPTIIHEKDGevARVTGIYDIAYLKDKTGDLG------------------    
67 UniRef50_B7XGR9 Putative pilus assembly pro...    94     4e-18  1  15.6% 24:202  33:225     -----------------------KEFDPVLLEQVREISRNANAARAESGQDDMSWVSEMAEKAIIQAGDENVQQSDSGLASADGSDREKkrTLIFVSWSMGATALKDILLSFDGlgVGIVFRGIPDgsMGDAVTKMHLLTQETQsvSVLLDPLAFQRHSVSAVPTVALEAPNdiAKAAGSSSVSYIEGAVKerGDLGTIGST----------    
68 UniRef50_B1WUF3 Putative uncharacterized pr...    83     5e-15  1  21.1% 99:207   7:104     --------------------------------------------------------------------------------------------------SMVNSAMMNLFKNSKALLTVLTL-----GSVATTASATQALTLKVEVENLS--PLG----GVALTPVWVGFHDGSFDSYNGGLSSQRGLEQIAEDGDATTISQDFLNNL-----    
   consensus/100%                                                                              ..................................................................................................ths...h..h............h..........................h...s......th..hs.hh.............................................    
   consensus/90%                                                                               ...........................................................................................hhhhhS.shs...l.thh.p.tthth.hhhpGh..tth..hhthh.th..t....th.lsP.hFptatlp.lPshlh...t.h..h.Gth....hlp.h.t....................    
   consensus/80%                                                                                .................................................................................t...t...thhhFhS.ohPttsLhphhtpspphthshhhpGhhtsshttshthh.pl..t....sh.lsP.hFppatlptVPshlh.p.tthshhhGshslt.sLp.htpps......t.........      
   consensus/70%                                                                                   ...............................p..t....h.t..t....th.t.t.........tt...t.hhtt.ttt.t.t...thhlFlShSMPtpsLpphhtpspphssshlhRGhhssshppThpthtplhttt.tssltIsPphFppatlptVPshVhhpsttashlhGslslt.uLcthspputhtt.st.h.t....       

MView 1.51.1, Copyright © 1997-2009 Nigel P. Brown