BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (319 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 490 e-137 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 350 3e-95 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 310 4e-83 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 308 2e-82 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 267 5e-70 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 259 6e-68 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 244 2e-63 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 242 1e-62 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 238 2e-61 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 213 7e-54 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 198 2e-49 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 191 2e-47 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 186 7e-46 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 174 4e-42 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 169 1e-40 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 168 3e-40 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 127 5e-28 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 110 6e-23 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 108 2e-22 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 99 1e-19 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 95 3e-18 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 94 6e-18 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 94 9e-18 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 93 2e-17 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 93 2e-17 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 92 3e-17 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 86 2e-15 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 84 5e-15 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 79 2e-13 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 77 6e-13 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 77 1e-12 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 76 1e-12 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 75 2e-12 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 72 3e-11 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 71 5e-11 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 71 6e-11 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 70 9e-11 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 70 9e-11 UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 70 1e-10 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 70 1e-10 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 67 6e-10 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 67 1e-09 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 66 2e-09 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 65 2e-09 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 63 1e-08 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 63 2e-08 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 62 2e-08 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 61 4e-08 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 60 9e-08 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 60 9e-08 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 59 3e-07 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 56 1e-06 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 55 2e-06 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 54 5e-06 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 54 7e-06 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 52 2e-05 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 51 5e-05 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 47 7e-04 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 47 8e-04 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 46 0.001 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 45 0.004 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 45 0.004 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 45 0.005 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 44 0.005 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 44 0.011 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 43 0.018 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 43 0.018 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 42 0.023 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 42 0.037 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 41 0.046 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 41 0.053 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 229/320 (71%), Positives = 273/320 (85%), Gaps = 1/320 (0%) Query: 1 MKL-SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRV 59 MKL R+SAINWN + DDKD EVW+RLT NFWLPEKVP+SND+P+W TLT E+QLTMRV Sbjct: 6 MKLIDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRV 65 Query: 60 FTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVD 119 FTGLTLLDT+Q +GA SL+PDALTPHEEAV +NI+FME+VHA+SYSSIFSTLC T ++D Sbjct: 66 FTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEID 125 Query: 120 AAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 A+ WSEEN LQRKA+I+ ++YRGD+PLK+K+AS LESFLFYSGF+LPMY+SSR KLT Sbjct: 126 EAFRWSEENNNLQRKAKIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLT 185 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 NTAD+IRLIIRDEAVHGYYIGYK+Q+ + + +R ELK + ++LL ELYDNE++YT + Sbjct: 186 NTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQD 245 Query: 240 LYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 LY +DVK FL YNANKALMNLGYE LFP + +VNPAIL+ALSPNADENHDFFSG Sbjct: 246 LYDRVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSG 305 Query: 300 SGSSYVMGKAVETEDEDWNF 319 SGSSYV+GKAV TEDEDW+F Sbjct: 306 SGSSYVIGKAVVTEDEDWDF 325 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 350 bits (899), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 161/314 (51%), Positives = 217/314 (69%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 + ++NWN + D+KDLEVWNR+ NFWLPEK+P+SNDIP+W+ L+ Q L + FTGLTL Sbjct: 27 LRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTFTGLTL 86 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q IG + ALT HE+ + +N +FM VHARSY +IFSTLC ++ ++AA+ W Sbjct: 87 LDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINAAHEWV 146 Query: 126 EENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLI 185 LQ++A+ + +Y G+DPLK K+A+ + FL Y GF+LP Y SSR +L NT+D+I Sbjct: 147 VNTESLQKRAKALIPYYTGNDPLKSKVAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDII 206 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETP 245 RLI+RD+ +H YY GYKYQ+ +EK+ L +++E+K+F F+L+ L + E Y ELY Sbjct: 207 RLILRDKVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYLKELYEGFG 266 Query: 246 WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 DD F YNA K L NLGY+ F A + P I A LS ADENHDFFSG+GSSYV Sbjct: 267 IVDDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGSSYV 326 Query: 306 MGKAVETEDEDWNF 319 MG + ET D+DWNF Sbjct: 327 MGVSEETNDDDWNF 340 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 310 bits (794), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/312 (48%), Positives = 215/312 (68%), Gaps = 3/312 (0%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 AI+WN++ D D W +LT FWL ++P+SND+ W+TL+ E+ + +VF GLTLLD Sbjct: 34 AIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGGLTLLD 93 Query: 68 TLQNVIGAPSLMPDAL-TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 TLQ+ GA SLM D + T HEEAV +NI FME+VHA+SYS+IFSTL +++ + W+ Sbjct: 94 TLQSEEGA-SLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIFEWTN 152 Query: 127 ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 N LQ KA+ I + Y+ D LK K+AS LE+FLFYSGF+ P+Y+ KL N A++I+ Sbjct: 153 NNEYLQFKAKKINEIYQSKDALKMKVASTMLETFLFYSGFFTPLYYLGNNKLANVAEIIK 212 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 LIIRDE+VHG Y GYK+Q+ ++S ++EE+K + ++L LELY NE++YT +Y + W Sbjct: 213 LIIRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIYDQVGW 272 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 + VK F+ YNANKAL NLG++PLFP +V+P ++ +S NHDFFS G+ Y++ Sbjct: 273 TEKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTS-NHDFFSQVGNGYLL 331 Query: 307 GKAVETEDEDWN 318 G +DED++ Sbjct: 332 GSVEAMDDEDYS 343 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 152/318 (47%), Positives = 208/318 (65%), Gaps = 3/318 (0%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 +++ AINWN++SD D W +LT FWL ++P++ND+ W+ L Q VF G Sbjct: 9 VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGG 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q+ G +L D TPHE AVL+NI FME+VHA+SYS+IFSTL + + Sbjct: 69 LTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIF 128 Query: 123 AWSEENAPLQRKAQIIQQHYR--GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 WS+ LQ KA I Y DPLKKK+A+VFLE+FLFYSGF+ P+Y+ KL N Sbjct: 129 EWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFLFYSGFYTPLYYLGHNKLNN 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 A++I+LI+RDE+VHG YIGYK+Q + + Q++++K + ++ L ELYDNE +YT L Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 Y + W DDV F+ YNANKALMNLG +PLFP ++VNP ++ +S + NHDFFS Sbjct: 249 YDQVGWTDDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVVMNGISTST-SNHDFFSQV 307 Query: 301 GSSYVMGKAVETEDEDWN 318 G+ Y MG D D++ Sbjct: 308 GNGYRMGAVEAMNDSDYD 325 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 201/319 (63%), Gaps = 8/319 (2%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 + A+NWN+ DD L W + FW E++PLS+D W ++ E+ + V GLTL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q +G P ++ +AVL+ +S ME +HA+SYSSIF+TL T+++DA + W Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 126 EENAPLQRKAQIIQQHYRGDDP----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 E N LQ+KA ++ Y+G + K ASVFLES+LFYSGF+ P+Y + +GK+T++ Sbjct: 121 ETNEQLQKKATLVSSWYQGIETKQQLYKAMAASVFLESYLFYSGFFYPLYLAGQGKMTSS 180 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 ++I LI+RDE++HG Y+G Q+ + + ++ +LK F LL LY+NE+ YTD LY Sbjct: 181 GEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQAQLKEEVFALLNTLYENEVVYTDNLY 240 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + +DVKA++ YNANKALMNLG+EP FP E VNP + +S + + HDFFS G Sbjct: 241 SPIGLQEDVKAYVRYNANKALMNLGFEPYFPEE--PVNPIVFNGISTHTKQ-HDFFSKKG 297 Query: 302 SSYVMGKAVET-EDEDWNF 319 + YV +E DED+ F Sbjct: 298 NGYVRTVHIEQLRDEDFVF 316 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 259 bits (663), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 139/319 (43%), Positives = 201/319 (63%), Gaps = 10/319 (3%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 A NW+K DD +N+ FWLPE++ L+ D+ W+ L EQ M+V GLTLLD Sbjct: 7 AANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLD 66 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFME-AVHARSYSSIFSTLCQTKDVDAAYAWSE 126 T Q G P + +AVL+ ++ ME AVHA+SYS+IF TL T+ ++ + W + Sbjct: 67 TEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVK 126 Query: 127 ENAPLQRKAQIIQQHYRG---DDPL---KKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 +N LQ+KAQ+I Y+ DD + K +ASV+LESFLFYSGF+ P+YF +GKL Sbjct: 127 QNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQ 186 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 + ++I LI+RDEA+HG Y+G Q+ K + ++ EL+ FA DLL +LY+NEL+YT++L Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDL 246 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 Y + + DVK F+ YNANKALMNLG++P F E ++NP +L L+ ++HDFFS Sbjct: 247 YDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEE--DINPIVLNGLNTKT-KSHDFFSMK 303 Query: 301 GSSYVMGKAVETEDEDWNF 319 G+ Y +D+D+ F Sbjct: 304 GNGYKKATVEPLKDDDFYF 322 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/318 (40%), Positives = 195/318 (61%), Gaps = 11/318 (3%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 A+NWNK + + W++ W PE++ +S DI W++ Q +VF GLTLLD Sbjct: 4 AVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSFE--HQDTYKKVFAGLTLLD 61 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 T+Q IG + E+AVL+ EA+HA+SYS IF+TLC +++D + W ++ Sbjct: 62 TVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKK 121 Query: 128 NAPLQRKAQIIQQHY----RGDDP--LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 N LQ KA I Y GD K +SV LESFLFYSGF+ P+Y +G L N+ Sbjct: 122 NEYLQYKANKIADIYNSIEEGDAESLWKAMFSSVMLESFLFYSGFFYPLYLGGQGFLRNS 181 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 A++I LI+RDE++HG +G+ Q ++ S ++E L+ + ++LLL+LY NE++YT+++Y Sbjct: 182 AEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQEALQLWGYELLLDLYQNEMKYTEDIY 241 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 AET + +VKA++ YNANKALMN+G+E +FP E EVNP ++ + N +DFFS G Sbjct: 242 AETGLSPEVKAYVRYNANKALMNVGFEAMFPEE--EVNPIVMNGIR-NEGSTYDFFSQKG 298 Query: 302 SSYVMGKAVETEDEDWNF 319 ++Y K D+ +NF Sbjct: 299 ATYAKAKVAPITDDTFNF 316 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 9/237 (3%) Query: 91 LSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKK 150 + I FME VHA+SYSS+FSTL ++D+D A+AW E N Q K + + Y D + Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 151 KI---------ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGY 201 ++ +SV LESFLFY+GF+LP++F+S+GKLTNTADLIRLI+RDE VHGYY+GY Sbjct: 61 RVEYYGAIIRASSVLLESFLFYTGFYLPLHFASQGKLTNTADLIRLIMRDEGVHGYYLGY 120 Query: 202 KYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKA 261 K+QK ME +R+ +K +L L+ NE+ +E+Y + V+ FL YN NKA Sbjct: 121 KFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIYEPLGLSAQVQTFLRYNLNKA 180 Query: 262 LMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 + NLG E +FPAEM V P IL+ LS +++E HDFFSGSGSSYV+G+A ET D+DW+ Sbjct: 181 MQNLGLENVFPAEMTRVEPRILSQLSVDSEETHDFFSGSGSSYVIGQAEETTDDDWS 237 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 7/315 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRGDDPLK----KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 ++I LI+RDE++HG YIG Q+ + ++ L+ + +L L +NE++YT+ +Y Sbjct: 190 EIISLILRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYR 249 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E+ +V FL YNAN+AL NLG+E L+ + +NP +L LS + HDFFS G+ Sbjct: 250 ESGLEKEVVNFLKYNANRALENLGFEKLYTVDA--INPIVLNGLSTET-KTHDFFSTKGN 306 Query: 303 SYVMGKAVETEDEDW 317 Y G E EDED+ Sbjct: 307 GYQKGVYEELEDEDF 321 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 162/297 (54%), Gaps = 2/297 (0%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 SA NW+++ D + + + W E++P+++D W+ L+ E+ RV GL + Sbjct: 4 SATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLNAM 63 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DTLQ +G P L +A L+ +FME VHARSYS T + A+ W E Sbjct: 64 DTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEWIE 123 Query: 127 ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 LQRK + ++ Y D L + +AS LE+ LFYSGF+ P+Y + +GK+++ ++ Sbjct: 124 MQPHLQRKITVFRRLYEEGDALTRMLASCLLETALFYSGFFYPLYLAGQGKMSHMGEVFT 183 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 LI DEA+HG Y+G +Q+ + G++ +++ L E Y+NE YTDE+YAE Sbjct: 184 LICADEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVYAEVGL 243 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSS 303 A +VK F+ YN N NLG E LFP E EVNP +L + HDFFS G+ Sbjct: 244 ASEVKTFVRYNFNICCDNLGLERLFPEE--EVNPLVLNGIRATGGTTHDFFSIKGAG 298 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 116/321 (36%), Positives = 190/321 (59%), Gaps = 12/321 (3%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 A+NWN +D W + FW+ + S DI +W +L + + V GLTLLD Sbjct: 8 AVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLD 67 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 TLQ+ G P ++ + +VLS + ME +HA+SYS+IF+T+ T++++ + W +E Sbjct: 68 TLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQE 127 Query: 128 NAPLQRKAQIIQQHYRG-DDPLKKK-------IASVFLESFLFYSGFWLPMYFSSRGKLT 179 N LQ KA I +Y+ ++P K ASV+LE++LFYSGF+LP++ + +G++ Sbjct: 128 NPHLQYKANKIDTYYQKMNNPEASKRDIAMALAASVYLETYLFYSGFFLPLWLAGQGEMV 187 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 + D+I+ II DE++HG ++G +Q+ S ++ ++++ L+ +LY+NE +YTDE Sbjct: 188 ASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDE 247 Query: 240 LYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 +Y + +VK ++ YNANKALMNLG+E F E+ VNP +L L+ + HDFFS Sbjct: 248 IYGDLGLTGNVKEYIRYNANKALMNLGFEEEF--EVKNVNPIVLNGLNVETTQ-HDFFSK 304 Query: 300 SGSSYVMG-KAVETEDEDWNF 319 ++Y + V D+D+ F Sbjct: 305 KSTNYEKALEVVHLHDDDFKF 325 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 181/322 (56%), Gaps = 7/322 (2%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 MK +R AINWN++++ W++ FW+ E++P+S+D W TL E+ + +V Sbjct: 1 MKQNR-EAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVL 59 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 GLTLLDT Q +G P L + VL + ME +HA+SYSSIFS+L +D Sbjct: 60 GGLTLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDH 119 Query: 121 AYAWSEENAPLQRKAQIIQQHYRG-DDPL---KKKIASVFLESFLFYSGFWLPMYFSSRG 176 + W + Q K +I Y D + K SVFLE+FLFYSGF+ P+Y + +G Sbjct: 120 IFGWVKTYRNFQDKLDLILGKYNSIHDRMSLYKALCTSVFLETFLFYSGFFYPLYLAGQG 179 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ N+ ++I LI+RDE+VHG ++G Q+ K++ ++ + A +L LY E Y Sbjct: 180 KMVNSGEIINLILRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAY 239 Query: 237 TDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 T +LY+ V F+ YNA+KALMNLG++ F +VNP +L L N + HDF Sbjct: 240 TKDLYSSIGLEGAVDVFVRYNADKALMNLGFDSAFNIRDIDVNPLVLNGLRTNT-KTHDF 298 Query: 297 FSGSGSSYVMGKAVE-TEDEDW 317 FS G+ Y+ VE +D+D+ Sbjct: 299 FSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 174/325 (53%), Gaps = 14/325 (4%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 + A NW+K + L W + W E+ S D+ W+TL+ EQ+ ++ +GLT Sbjct: 6 KARATNWDK-DNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLT 64 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA- 123 LDT Q G P L V + +S ME +H +SYS IF++L + KD Sbjct: 65 GLDTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKE 124 Query: 124 WSEENAPLQRKAQIIQQHYRG---DDPLKKKI-----ASVFLESFLFYSGFWLPMYFSSR 175 W N L +K ++I +Y +P ++I +S+FLESFLF+SGF+ P+Y + + Sbjct: 125 WVPANKYLNKKTKLITTNYYKLLKPNPTDREIYVAMASSIFLESFLFFSGFYYPLYLAGQ 184 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ ++ ++IR II DE +HG GY Q +K S ++E+++ +L +LY NE++ Sbjct: 185 GKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEEQEDIRKELMELFDQLYFNEVE 244 Query: 236 YTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 Y LY + +DV ++ YN N+ALMNLG+E +F E NP + L + NHD Sbjct: 245 YAASLYDKLGLTEDVIRYIQYNGNRALMNLGWETVFNPE--PFNPIVENGLRTDTT-NHD 301 Query: 296 FFSGSGSSYVMG-KAVETEDEDWNF 319 FFS G Y + V D+D++F Sbjct: 302 FFSVKGDGYTLALNQVPLRDKDFDF 326 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/283 (32%), Positives = 155/283 (54%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 A NWN + + D W RL + P +VP+ D + L EQ + + F LTL Sbjct: 9 ANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLSS 68 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 TLQ + + DA E AV + + ++E+++ ++YS + + +K + AY W+ + Sbjct: 69 TLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQ 128 Query: 128 NAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRL 187 N LQ+K + + Y+ + ++KK A VFL + L++S F+ P+Y + KL TA+LI+ Sbjct: 129 NPYLQKKMKFLNTVYQSGNAIQKKAAHVFLSTGLYHSSFFGPLYLFGQHKLPRTAELIKY 188 Query: 188 IIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWA 247 +R ++G Y G K++++ K+S ++ ++ + +DL LYDNEL + LY T Sbjct: 189 ALRITTLNGIYTGIKFRRDFFKLSKKEQNKVHDWVYDLCDNLYDNELSHIKLLYQNTDLE 248 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 D V+ ++ Y NKALMNLG EP +P + ++P + L +A Sbjct: 249 DKVEHYIHYTLNKALMNLGQEPKYPENVETLDPILTTGLMESA 291 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRG----DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIG 200 ++I LI+RDE++HG YIG Sbjct: 190 EIISLILRDESLHGKYIG 207 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 88/290 (30%), Positives = 154/290 (53%), Gaps = 1/290 (0%) Query: 2 KLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFT 61 K S NWN + D D W RL + P +VP+ D + L EQ + + F Sbjct: 9 KKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLLHSFG 68 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDA 120 L L TLQ + + DA E AV + + ++E+++ ++Y + + + D Sbjct: 69 SLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNEQRDE 128 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 A+ W+ +N LQ+K +++ Y+ D+ ++KK A VF+ + L++S F+ P+Y + KL Sbjct: 129 AFNWANQNPYLQKKMRLLNTVYQSDNAIQKKAAHVFISTGLYHSSFFGPLYLFGQHKLPR 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 TA+LI+ +R ++G Y G K++++ +S +++ + + +DL LY NEL + L Sbjct: 189 TAELIKYALRITTLNGIYTGIKFRRDFFNLSKEEQKNIHKWVYDLCDRLYANELNHIHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 Y +T D V+ ++ Y NKALMNLG EP +P + ++P + L +A Sbjct: 249 YEDTGLEDKVEHYIHYTLNKALMNLGQEPKYPENVETLDPTLTTGLMESA 298 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 6/212 (2%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 AINW++ D D W +LT+NFWL +VP+++D P+W LT +Q G LL Sbjct: 8 AINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRALLS 67 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 Q+ +GAPSL T EEAVL+ I+FME+VH ++ ++IF L + A YAW++ Sbjct: 68 AFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTDEETTAAYYAWADG 127 Query: 128 NAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGF-WLPMYFSSRGKLTNTADLIR 186 APLQ + + GDD +++ + + + +GF W + ++ L T +++ Sbjct: 128 QAPLQAALTDLTKGIEGDDLMRRGL--FLIADTVLCAGFDWAVL---TQPALAQTNQMLK 182 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREEL 218 I+ + Y+ YK+++ + ++ ++E L Sbjct: 183 NILTGNLIFRDYLAYKFRQGIAELPFAKQEAL 214 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 16/311 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 S +NWN I+ + ++ +L SNFW+P+++ +S D+ W LT EQ R+ L++L Sbjct: 27 SIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQLTEREQDAFKRIIGLLSIL 86 Query: 67 DTLQN-VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 D++Q I S+ + H AVL+ I+ E VH +SYS + S+L + + + + Sbjct: 87 DSVQTRYILESSMFSSDSSVH--AVLAVIAQQEVVHNQSYSYVLSSLVPLAEQNRIFNIA 144 Query: 126 EENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL 178 +++ + ++ Q I Y ++ K +ASV LE FYSGF + K+ Sbjct: 145 KDDEMVMKRNQFILDLYEAFRETPNAENFAKSLVASVILEGINFYSGFAYFYNLARHQKM 204 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNM-EKISLGQREELKSFAFDLLLELYDNELQYT 237 T+ +I I RDE H Y+I + + E + + + F +D + E D E+++ Sbjct: 205 VGTSTMISYIQRDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWC 264 Query: 238 DELYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAAL--SPNADEN 293 + + + D +++ ++ Y ANK L +G L+ +V P I A S NA ++ Sbjct: 265 EYVLRDLDGLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKS 324 Query: 294 HDFFSGSGSSY 304 DFF SY Sbjct: 325 -DFFEQKSRSY 334 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 4/266 (1%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 AINWN + D+ D VW R TS FWL ++P+ ND W L + EQ + LT L Sbjct: 10 AINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTNLS 69 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 T Q++ + + E A+L+NI F+E V+ ++Y+ I T + +++ ++ W + Sbjct: 70 TNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVDN 129 Query: 128 NAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFS--SRGKLTNTADLI 185 ++ + I YR +KK+ ++ +E L Y+ +L F + N ++ Sbjct: 130 DSRVLEYLNDINTVYRESSLIKKRFIALCVEGLLNYA--YLSHLFELWINKEFNNLGTML 187 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETP 245 +IIR+E++H +Y +K + +++ + E K+++++ + L D+ Y Sbjct: 188 EMIIRNESLHCFYFSHKVKLLLKESDPKEVERFKAWSYETVNHFVKLGLNIIDDFYYLKE 247 Query: 246 WADDVKAFLCYNANKALMNLGYEPLF 271 K + AN LM +G + F Sbjct: 248 SKKIAKNLILQEANNILMGIGLKEQF 273 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 26/324 (8%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTL 69 W+ I + E+ + FW+P++V +S D W T + +EQ+L + L +LD++ Sbjct: 32 WDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWATEMNEMEQELFLNAIGILAVLDSI 91 Query: 70 QNV---IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 + A + A+ +A+++ ++ ME +H SY+ I S++ + + Sbjct: 92 ATYFDNVAAYYIRDSAI----KALMAFVAAMETIHNESYTYILSSVSSKAVSLDVFERPK 147 Query: 127 ENAPLQRKAQIIQ-------QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 +N + R+ +++ Q+ + K +A LE F +GF +F+ GK+ Sbjct: 148 KNEFMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMF 207 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 T +I+ I RDE H Y+ + + + EE F +D EL E ++ ++ Sbjct: 208 GTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCED 267 Query: 240 LYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI-LAALSPNADEN--H 294 LY TP D +VK ++ Y AN L NLG + +F A+ NP + A P+ N Sbjct: 268 LYKNTPDIDIEEVKEYIGYRANLILDNLGLDQIFSAKK---NPMPWITAFDPDNLNNTKR 324 Query: 295 DFFSGSGSSYVMGKAVETEDEDWN 318 DFF +Y GKA E ++ DW+ Sbjct: 325 DFFEDKEVNY--GKANEQKN-DWD 345 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 30/303 (9%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 +NFW+PE++ +S+D+ ++ L+ +E+ ++ + L LD++Q P++ Sbjct: 55 NNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTA-NLPNIGQYITANEI 113 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDV-DAAYAWSEENAPLQRKAQI--IQQHYRG 144 L+ +F EAVH++SYS + T+C ++ D Y W ++ L R I + ++ Sbjct: 114 NLCLTIQAFQEAVHSQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQD 173 Query: 145 DDP----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIG 200 D LK IA+ LE FYSGF K+ + IR I RDE H + Sbjct: 174 DKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTHLWLFR 233 Query: 201 YKYQKNMEKISLGQREELKSFAF-------DLLLELYDNELQYTDELYA-ETPWADD--V 250 Q+ Q+EE + F D++ E + E+++ D + + P + V Sbjct: 234 SIIQE-------LQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLNRHMV 286 Query: 251 KAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN---HDFFSGSGSSYVMG 307 ++ Y N NLG+EPL+ E V P ++ +S ++ N DFF ++Y Sbjct: 287 ADYIRYLGNLRCENLGFEPLY--EGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYAKS 344 Query: 308 KAV 310 A+ Sbjct: 345 SAM 347 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 17/320 (5%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I +++ L NFW P ++ +S+DI W L+ E+ + + L++LD+ Sbjct: 29 LNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDIKQWHALSERERDAFLHIIGLLSILDS 88 Query: 69 LQ-NVIGAPSLMPDALT-PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 +Q N IGA M + +T P +A+ S I E VH +SYS + +++ + + A+ + Sbjct: 89 VQPNFIGA---MKEYITDPSVKAIFSIIEQQEVVHNQSYSYVLASIEKLSEQHRAFEMAR 145 Query: 127 ENAPLQRKAQIIQQHYRG--DDP-----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 N + ++ + + + Y + P + +AS+ LE FYSGF + K+ Sbjct: 146 TNPHIYKRNEHVIRVYEAFREQPTVETFCRALVASLVLEGINFYSGFAFFYNLARNQKML 205 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNM-EKISLGQREELKSFAFDLLLELYDNELQYTD 238 T+ +I I +DE H Y+I + + E + + ++ +D + E E +++ Sbjct: 206 KTSTMISYINKDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSR 265 Query: 239 ELYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHD 295 + + D +++ ++ Y NK L LG + + A+ + P I N + D Sbjct: 266 FVLRDIDGIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSM-PWIRVFSDENVNLGKTD 324 Query: 296 FFSGSGSSYVMGKAVETEDE 315 FF SY V DE Sbjct: 325 FFEARPRSYTKTTDVNGFDE 344 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 151/319 (47%), Gaps = 22/319 (6%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 WN+I D +++ + +NFW+PE++ L+ D+ + LT E++ ++ L LD++Q Sbjct: 29 WNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFPYLTDYERRAFDKIIAFLNFLDSIQ 88 Query: 71 NVIGAPSLMPDALTPHEEAVLSNI-SFMEAVHARSYSSIFSTLCQTKDVDAAY-AWSEEN 128 + P+L +T E A L NI +F E +HA+SYS I T+ D Y W + Sbjct: 89 SE-NLPNL-SRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPITRDKIYDEWRTDK 146 Query: 129 APLQRKAQIIQQHYR-GDDP-----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 L+R I + R DDP + IA+ LE FYSGF + +GK+T T+ Sbjct: 147 TLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFYSGFSFFYTLARQGKMTATS 206 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE----ELKSFAFDLLLELYDNELQYTD 238 + + I RDE H +Q + ++ + + EL++ D++ + +NE+ + Sbjct: 207 TIFKYINRDEVTHLVL----FQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQ 262 Query: 239 ELYAETPWADD---VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 + + + ++ ++ Y AN L +G L+P E+ + + + S D Sbjct: 263 YITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYP-EIKDNPMEWIESFSNLNSTKTD 321 Query: 296 FFSGSGSSYVMGKAVETED 314 FF ++Y A + +D Sbjct: 322 FFEAKVTNYTKAAAFDFDD 340 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 8/182 (4%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++ + +NFW+PEKV L+ D ++ LTV E++ + + L LD++Q P++ Sbjct: 45 QLYRTMMANFWIPEKVDLTQDKNDYENLTVPEREAYDGILSFLIFLDSIQ-TNNIPNISD 103 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY-AWSEENAPLQRKAQI-- 137 P +L+ +F EA+H++SY I ++ + D Y W ++ +R + I Sbjct: 104 HVTAPEVNLLLAIQTFQEAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAK 163 Query: 138 IQQHY---RGDDPLKKKI-ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 I Q + + D+ K I A+ LES FY+GF +SR K+ T+D+IRLI RDE Sbjct: 164 IYQDFIDEQSDENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDEL 223 Query: 194 VH 195 H Sbjct: 224 SH 225 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 22/324 (6%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 + +NW+ + ++ + +NFW P ++ +S+D + TLT EQ+ ++ L L Sbjct: 28 NVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFL 87 Query: 67 DTLQ---NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 D++Q ++ A L +L A++S +SF E VH +SYS + S+L D + Sbjct: 88 DSVQTDYSMRAAEYLTDSSLA----ALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFE 143 Query: 124 WSEENAPLQRKAQIIQQHYRG--DDP-----LKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + + + L+ + + I Y D+P L+ + V LE FYSGF + Sbjct: 144 YWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLARNQ 203 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE--- 233 K+ +T+ +I I RDE +H Y +++ + + EE K+F L++ D E Sbjct: 204 KMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDW 263 Query: 234 LQYT--DELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD 291 +Y D++ P +D++ ++ + ANK + LG E +P I A N+ Sbjct: 264 FRYIIGDKIPGINP--EDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSG 321 Query: 292 ENHDFFSGSGSSYVMGKAVETEDE 315 ++ DFF Y A DE Sbjct: 322 KS-DFFEQKSRQYAKVSADNGFDE 344 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 27/280 (9%) Query: 9 INWNKISDDKDLEVW----NRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 +NWN D+D E+W L +NFW P ++ + D W +LT +EQ +RV T L Sbjct: 38 LNWN----DED-EIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALA 92 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFM----EAVHARSYSSIFSTLCQTKDVDA 120 LD+LQ + + + + L+NIS EA H SYS I S+L + + Sbjct: 93 CLDSLQ-----VKAILEVIRFTTNSALANISAFIAQQEATHTTSYSYITSSLVRLPVQNQ 147 Query: 121 AYAWSEENAPLQRKAQIIQQHYR--GDDP-----LKKKIASVFLESFLFYSGFWLPMYFS 173 + + ++ L ++ +++ Y ++P + + S+ LE FYSGF + + Sbjct: 148 YFNETMKHPVLAKRNKLVLDVYEDFAENPSLQNLFRMLVQSINLEGIYFYSGFAFFYWLA 207 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 S+ K+ ++ +I I RDE H Y+IG ++ + + +E + D L E E Sbjct: 208 SQQKMMKSSTMISYIQRDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATE 267 Query: 234 LQYTDELYAETPWAD--DVKAFLCYNANKALMNLGYEPLF 271 ++ E+ A+ D + ++ Y ANK + LG + ++ Sbjct: 268 KEWAGEILADIEGLDLEEFDHYIEYLANKRVRQLGMDNIY 307 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 16/296 (5%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 +NFW+PE++ LS D + L E+Q ++ + L LD++Q+ P + + +T +E Sbjct: 63 NNFWIPEEINLSQDRKDYGELLGKERQAYDKILSFLVFLDSIQSA-NLPCI-GEYITANE 120 Query: 88 -EAVLSNISFMEAVHARSYSSIFSTLCQ-TKDVDAAYAWSEENAPLQRKAQI------IQ 139 LS +F E VH++SYS + T+C K + Y W + L+R I Q Sbjct: 121 INLCLSIQTFQECVHSQSYSYMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQ 180 Query: 140 QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGY-Y 198 LK +A+ LE FYSGF S GK+ +A IR I RDE H + + Sbjct: 181 MKKDSFTLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDENTHLWLF 240 Query: 199 IGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA-ETPWADD--VKAFLC 255 Q E+ L +E +++ ++L+E + E+ + + + P + ++ Sbjct: 241 RNMILQLKEEEPELFTKENIQALK-EMLMEGVEQEIAWGHYVLGDDIPGISKEMITEYIK 299 Query: 256 YNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE-NHDFFSGSGSSYVMGKAV 310 Y N LG++ ++P E + NA+ DFF ++Y A+ Sbjct: 300 YLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYAKSTAL 355 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 40/318 (12%) Query: 22 VWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD 81 ++ ++ NFW+P+++ ++ D+ + LT E+ + + LT LD++Q P L Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYLTFLDSVQTC-NIPHLKSS 111 Query: 82 ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQH 141 P ++ E +H +SY + T+ T+ D Y + + L+ + + I Sbjct: 112 VTAPEISLCMAEQISQEGMHNQSYQYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAML 171 Query: 142 YRG--DDPLKKK-----IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAV 194 Y+ D P ++ +A LE FY+GF +SR + +AD+ ++I RDE Sbjct: 172 YQKYVDHPTQENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 195 HGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDV---- 250 H YQK + + ++ + + D + E++D +++ E W + + Sbjct: 232 HVRL----YQK-----LIPEAMQVFTHSTDQIYEMFDKAVEF------ECRWTNHIVGNN 276 Query: 251 ---------KAFLCYNANKALMNLGYEPLFPAEMAEVNPAI-LAALSPNADENH---DFF 297 + + Y AN L +G +PL+ +P L S E H +FF Sbjct: 277 ILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFF 336 Query: 298 SGSGSSYVMGKAVETEDE 315 + +SYVM V DE Sbjct: 337 EATVTSYVMSSGVSGWDE 354 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 20/310 (6%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I + L++NFW+P++V + D + L+ E+ + L LD+ Sbjct: 34 LNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGELSAREKNAYDAIIGLLATLDS 93 Query: 69 LQN--VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 Q + + D P A + I E +H SYS + +++ + + + + Sbjct: 94 PQTRFIYNVAEYITD---PAAHANAAIIGQQEVIHNESYSYVLASITDLANQNRVFEIAR 150 Query: 127 ENAP-LQRKAQIIQQHYRGDDPLKKK---------IASVFLESFLFYSGFWLPMYFSSRG 176 + L+R A I+Q + DD +++K I S LE FYSGF + Sbjct: 151 THPTILKRNAPIMQAY---DDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQN 207 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 ++T T +I I RDE H +I + + + Q + L + + E Q+ Sbjct: 208 RMTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQW 267 Query: 237 TDELYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 T E+ D ++ ++ Y ANK LG E L+ V P I A + Sbjct: 268 TGEVLNGIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKT 327 Query: 295 DFFSGSGSSY 304 DFF +SY Sbjct: 328 DFFEMRNASY 337 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 26 LTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTP 85 + NFW+PE+VPL +D + LT EQ R+ + + +D++ V P+L+ P Sbjct: 50 MLRNFWIPEEVPLLDDAKQYLELTADEQWAYDRMLSFVIFMDSILTV-SMPNLINYVTAP 108 Query: 86 HEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY-AWSEENAPLQRKAQIIQQ-HYR 143 LS +F EA+H++SY + ++ + Y W E+ L+R I Sbjct: 109 EINMCLSIHNFHEALHSKSYGYVLESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLF 168 Query: 144 GDDP-----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 D+P ++ +A LE FYSGF + GK+ TA I+ I RDE H Sbjct: 169 ADNPTDEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITH 225 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%) Query: 218 LKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAE 277 L+ + +L L +NE++YT+ +Y E+ +V FL YNAN+AL NLG+E L+ + Sbjct: 6 LEEKMYSILYSLMENEIEYTNVIYRESGLEKEVVNFLKYNANRALENLGFEKLYTVDA-- 63 Query: 278 VNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDW 317 +NP +L LS + HDFFS G+ Y G E EDED+ Sbjct: 64 INPIVLNGLSTET-KTHDFFSTKGNGYQKGVYEELEDEDF 102 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 9/175 (5%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 +N W PE+V ++ D + LT+ E+Q R L +D+LQ ++ P P Sbjct: 59 ANTWFPEEVNMNQDKRDYMELTLQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEI 118 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYR--GD 145 +L +F E++HA+SY+ + ++ + + D Y ++ L+ K I Y Sbjct: 119 NMLLVRQAFEESLHAQSYAVMVDSI--SANTDEIYQMWRKDDKLRSKNDYIADVYTDLAK 176 Query: 146 DP-----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 +P +K A+ LE FYSGF + GK+ N+A++IR I RDE H Sbjct: 177 NPTETNLIKAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITH 231 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 8/175 (4%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 +NFW+PE++ L D+ ++ L E++ ++ + L LD++Q+ P++ Sbjct: 51 NNFWIPEEINLGQDVKDYRQLPAAERRAYDKILSFLVFLDSVQSA-NLPNVSAYITANEV 109 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDV-DAAYAWSEENAPLQRKAQI------IQQ 140 + L+ SF E VH++SYS + T+ + + + W ++ L R I QQ Sbjct: 110 DLCLTIQSFQECVHSQSYSYMLDTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ 169 Query: 141 HYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 ++ L+ IA+ LE FYSGF G++ + IR I RDE H Sbjct: 170 EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENTH 224 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 31/316 (9%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I +++ L N W+ +++P++ D + L EQ+ + L +LD+ Sbjct: 27 LNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDAQQFALLDPEEQRTFKINISLLAVLDS 86 Query: 69 LQN--VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA-WS 125 +Q V D+ EA+ + I E VH +SYS + S++ ++ + W Sbjct: 87 MQTMFVGDVKRYFTDSSL---EAISAIIGQQEVVHNQSYSYVLSSIVSEQEQKEIFEYWK 143 Query: 126 EENAPLQRKAQI--IQQHYRGDDPLKKK-----IASVFLESFLFYSGFWLPMYFSSRGKL 178 + L R I I Q++R D+P + +A + LE FYS F + K+ Sbjct: 144 HDPVLLDRNKFIANIYQNFR-DEPTPQSFFEALVADLILEGIFFYSTFAFFYNLARDQKM 202 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAF---DLLLELYDNELQ 235 T+ +I I RDE H Y+ +++ + +E +A+ D +EL N Sbjct: 203 MGTSQMISYIQRDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAH 262 Query: 236 YTDELYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE- 292 YT P D ++ ++ Y ANK L +G E + A V+ + + P +DE Sbjct: 263 YT---LKNVPGIDLNELSDYIKYIANKRLTLMGLEKAY----AGVDINCMPWIKPFSDEA 315 Query: 293 ----NHDFFSGSGSSY 304 DFF +Y Sbjct: 316 LNATKTDFFEAKSRNY 331 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 11/174 (6%) Query: 28 SNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQ-NVIGAPSLMPDALTP 85 +NFW+PE++ + D ++T L+ E++ V + L LD+ Q +++ M A P Sbjct: 57 TNFWIPEEIQMLEDRKQYETVLSDYEKRAYELVLSFLIALDSFQVDMLKEFGRMITA--P 114 Query: 86 HEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRG- 144 E ++ F E+VHA SY I ++ D Y + E+ L + ++I + Y Sbjct: 115 EVEMAITAQEFQESVHAYSYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEF 174 Query: 145 ------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDE 192 ++ +K I + LES FYSGF +GK+ NT I+ I RDE Sbjct: 175 IRKPNEENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINRDE 228 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 8/182 (4%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 ++ + +N W+P+ L+ DI + T+ ++ + + LT LD+LQ + P LMP Sbjct: 43 HLFTEMRANIWIPQATDLTPDINNYVTMPPNMRRAFDGMLSYLTFLDSLQTRV-LPLLMP 101 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQ 140 P + E VH++SY+ I T+ T D Y E+ L ++ + IQ Sbjct: 102 VITAPEVSICMGEQLSQEQVHSQSYAYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQN 161 Query: 141 HY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 Y ++ ++ LE F+ GF L ++ ++ TAD+I+LI RDE Sbjct: 162 LYDRYIHEMTMENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQ 221 Query: 194 VH 195 H Sbjct: 222 TH 223 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 15/223 (6%) Query: 95 SFMEAVHARSYSSIFSTLCQTK--DVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKI 152 + AV S++ ++ + + D +A Y +E+ L R+ Q + + D K Sbjct: 99 TLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEELSRRIQFVGKSVNDPDDAKSFA 158 Query: 153 ASVFLESFLFYSGFWLPMYFSSR--GK--LTNTADLIRLIIRDEAVHGYYIGYKYQ---- 204 A F+E + YS F +F ++ GK + N + L + DE H +Q Sbjct: 159 AFTFIEGAVLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCR 218 Query: 205 KNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPWADDVKAFLCYNANKA 261 + EK R +LK+ ++ +++D+E D ++AE AD+++ F+ N Sbjct: 219 EMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFAEPIDGITADELRVFVKSRINLC 278 Query: 262 LMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSY 304 L NLGYEP+F E + + NA + HDFF+GSGS Y Sbjct: 279 LENLGYEPIFEIENNPIADWFYRTI--NAKKFHDFFTGSGSEY 319 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 43/218 (19%) Query: 16 DDKDLEVWNRLT----SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 D + E++ +L S FW PE+V LS D +Q L E+ + + TLLD++Q Sbjct: 30 DQQKYEIFEKLIEKQLSFFWRPEEVDLSRDYIDFQNLPQHEKHIFVSNLKYQTLLDSIQG 89 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQT---------------- 115 +L+P P E + SF E +H+RSY+ I + T Sbjct: 90 RSPNIALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINTPSLIFDDIIDNKNIAN 149 Query: 116 --KDVDAAY-----------AWSEENAPLQRKAQIIQQHYRGDDPLKKK-----IASVFL 157 KD+ Y + E + K I H LKKK I+ L Sbjct: 150 RAKDIAKYYDDLIELTSYWHLFGEGKHTINGKKIKIDLH-----ELKKKLYLCLISVNAL 204 Query: 158 ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 E+ FY F F+ R K+ A +IRLI RDEA+H Sbjct: 205 EAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEALH 242 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 41/265 (15%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 S FW PE+V +S D +Q L E+ + + TLLD++Q +L+P P Sbjct: 46 SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHY----- 142 E + +F E +H+RSY+ I + D + N +Q++A+ I +Y Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIE 163 Query: 143 ---------RGDDPLKKKIASV-----------------FLESFLFYSGFWLPMYFSSRG 176 G + K +V LE+ FY F F+ R Sbjct: 164 MTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE 223 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQ------REELKSFAFDLLLELY 230 + A +IRLI RDEA+H G ++ N+ + EE K +DL ++ Sbjct: 224 LMEGNAKIIRLIARDEALH--LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAA 281 Query: 231 DNELQYTDELYAETPWADDVKAFLC 255 E + D L+ + K LC Sbjct: 282 QQEKDWADYLFRDGSMIGLNKDILC 306 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 26/309 (8%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 + W+ WLPE+VPL++DI W+ LT E+ L ++F T D N Sbjct: 35 KAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIEVNNCYMKHY- 93 Query: 80 PDALTPHE-EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQII 138 P E + +LS S ME +H +YS + T+ + +E A ++ KA Sbjct: 94 ARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIGMPE--------TEYQAFMKYKAMKD 145 Query: 139 QQHY--RGDDPLKKKIASV------FLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 + Y R + K++IA+ F E ++ F + + F K+ +I +R Sbjct: 146 KYDYMQRFNVDNKEEIATTLAVFGAFTEGVQLFASFAILLNFPRYNKMKGMGQIITWSVR 205 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY----AETPW 246 DE +H I ++ +++ E+LKS ++ + E + D + E Sbjct: 206 DETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLE 265 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 A DVK ++ Y A++ L+ LG + + + E NP N E+ +FF + Y Sbjct: 266 ARDVKKYIRYIADRRLLQLGLKENY---LIEQNPLTWLDQILNGVEHTNFFENRVTEYTR 322 Query: 307 GKAVETEDE 315 + DE Sbjct: 323 SATTGSWDE 331 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 9/178 (5%) Query: 22 VWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD 81 + +R+ +N W P V +++D+ ++ L ++ + + L+ LD +Q ++ Sbjct: 14 ILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFNNINQNIAKH 73 Query: 82 ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQH 141 +P LS ++ EA+H +SY++I T+ + D + Y E + L +K Q I + Sbjct: 74 VTSPEVSMCLSRQAWEEALHVKSYATIIETV--SLDPMSVYMTFERDGLLAQKNQFILKQ 131 Query: 142 YR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDE 192 R + +++V LE F+SGF + +G++ +AD+IR I RDE Sbjct: 132 SRLLGEKFSAEGFALSCVSNVLLEGVYFFSGFLSFYLLADKGEMLGSADMIRYIQRDE 189 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/307 (23%), Positives = 126/307 (41%), Gaps = 34/307 (11%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++N+ +N W P ++ L D+ + +T E + + + L N A + P Sbjct: 23 DLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNKALAFGVYP 82 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI--- 137 L+ + EA H ++ + T D D AY + RK Sbjct: 83 YVNAAECHLYLAKQMWEEANHCMAFEYVLETF--PIDRDEAYRSHIHVPSMARKEAFEVA 140 Query: 138 -----------IQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKLTNTADLI 185 I D ++ IA ++ LE FYSGF + + F R L N LI Sbjct: 141 FIKRMTEQTLDITTVEGKQDFVRNLIAYNIILEGIWFYSGFMVALSFRQRNLLRNFGSLI 200 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAF-----DLLLELYDNELQYTDEL 240 ++RDE++H K+ N+ L + E+ + F D++++ + E QY ++ Sbjct: 201 DWVVRDESLH-----LKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDM 255 Query: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 AD V ++ Y A++ L LG+EP E VNPA A + + + +FF Sbjct: 256 LPRGILGMNADYVNDYVKYLADRRLEELGFEP----EYRVVNPAKWMATANDTLQVVNFF 311 Query: 298 SGSGSSY 304 + +SY Sbjct: 312 EATNTSY 318 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 34/308 (11%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 ++++++ +N W P ++ L DI ++ +T E+ + + + L N A + Sbjct: 24 MDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITFLMSYFNPNELLVNKALAFGVY 83 Query: 80 PDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI-- 137 P P L+ + EA H S+ + T D +AAY + + RK + Sbjct: 84 PYINAPECHLYLAKQMWEEANHCMSFEYVLETF--PIDREAAYNSHVDIPSMARKEEFEV 141 Query: 138 ------------IQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 I D ++ +A +V LE FYSGF + + F R L N L Sbjct: 142 KFIKRMTEQTLDITTTEGKKDFVRNLVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSL 201 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAF-----DLLLELYDNELQYTDE 239 + I+RDE++H K+ N+ L + +L++ F ++L+ + E QY + Sbjct: 202 MDWIVRDESLH-----LKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRD 256 Query: 240 LYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 L A+ + ++ Y A++ L LG+E AE NPA A + + + +F Sbjct: 257 LLPNGILGLNANYINQYVKYLADRRLEELGFE----AEYKVSNPAKWMATANDTLQLVNF 312 Query: 297 FSGSGSSY 304 F + +SY Sbjct: 313 FESTNTSY 320 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 9/196 (4%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 S + NKI +W + +N W E+V +++D + L+ E+ R L + Sbjct: 29 SMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQLIFM 88 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 D+LQ ++ P +P L ++ EA+H+ +Y+ + ++ + + + Y Sbjct: 89 DSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESI--SANTEEIYDMWR 146 Query: 127 ENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 + L+ K I Q Y ++ LK A+ LE FYSGF + GK+ Sbjct: 147 NDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARSGKML 206 Query: 180 NTADLIRLIIRDEAVH 195 +A +IR I RDE H Sbjct: 207 GSAQMIRFIQRDEVTH 222 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 + I N I + +++ + +NFW+PE++PL++D + L+ E++ +V + L + Sbjct: 53 NMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLLSDDERRSYNKVLSFLIFM 112 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 D+L P++ P L+ +F EAVH++SY + ++ D Y Sbjct: 113 DSLL-THNLPNINEYITAPEVNLCLTVHAFQEAVHSQSYGYVLDSVVNPATRDQIYNEWR 171 Query: 127 ENAPLQRKAQIIQQHYRG--DDP-----LKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 + L R+ Q I + ++P +K +A+ LE FY+GF +GK+ Sbjct: 172 NDDHLLRRNQFITDLFEEFIENPTDRNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKML 231 Query: 180 NTADLIRLIIRDEAVH 195 T I+ I RDE H Sbjct: 232 GTVSEIKFIQRDELTH 247 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 121/304 (39%), Gaps = 34/304 (11%) Query: 29 NFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL-TLLDTLQNVIGAPSLMPDALTPHE 87 N W PE+VPL +D+ W E++ + +F G +++L SL P Sbjct: 34 NTWFPEEVPLHDDVRDWHERLSDEERRAVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEA 93 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK----AQIIQQ--- 140 L+ ++ EA H ++ + TL D + + E+ + K Q+ +Q Sbjct: 94 RLYLARQAWEEANHVMAFEYVIKTL--PLDRERVFGLHVEHPAVAAKELFQRQLAEQWLV 151 Query: 141 -----HYRGDDPLKKKIASVF--LESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 G L + + F LE FYSGF L + F R L ++ +++DE+ Sbjct: 152 TPDVESVEGLQRLVRNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDES 211 Query: 194 VHGYYIGYKYQKNMEKISLGQREELKSFAF-----DLLLELYDNELQYTDELYAETPW-- 246 +H + ++ L + E+ S AF +L+L + E Y + E Sbjct: 212 LH-----LSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266 Query: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 AD + ++ Y A++ L LG P E NP + E +FF Y Sbjct: 267 DADVLNRYVRYIADRRLEELG----LPIAFGEPNPLRWMVAQVDMPEIVNFFEARNIHYE 322 Query: 306 MGKA 309 +G+A Sbjct: 323 VGRA 326 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 111/273 (40%), Gaps = 53/273 (19%) Query: 16 DDKDLEVWNRLT----SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 D + E + +L S FW PE+V +S D + L E+ + + TLLD++Q Sbjct: 30 DQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYAALPEHEKHIFISNLKYQTLLDSIQG 89 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 +L+P P E + +F E +H+RSY+ I + D + N + Sbjct: 90 RSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNI--VNDPSIVFDDIVTNEEI 147 Query: 132 QRKAQIIQQHYRGDD----------------------------PLKKKIASVF-----LE 158 ++AQ I +Y DD LKK++ LE Sbjct: 148 IKRAQDISSYY--DDLIRDSQLYGLYGEGTYTVDGKECVVTLRSLKKQLYLCLMSVNALE 205 Query: 159 SFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQ---- 214 + FY F F+ R + A +I+ I RDEA+H G ++ N+ ++ GQ Sbjct: 206 AIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEALH--LTGTQHILNI--MAAGQDDPE 261 Query: 215 ----REELKSFAFDLLLELYDNELQYTDELYAE 243 EE K A+DL + + E + D L+ + Sbjct: 262 MAEIAEECKQEAYDLFVAAAEQEKAWADYLFKD 294 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 124/315 (39%), Gaps = 38/315 (12%) Query: 29 NFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEE 88 N W E+V L +D+ L+ E+ L R+ DT+ +L +P Sbjct: 48 NTWTVEEVDLHSDLGDLAKLSSAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGR 107 Query: 89 AVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQRKAQII--------- 138 LS F EAVH + Y ++ T + K+ AA+A E + RKA+ Sbjct: 108 LYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVENIPSIARKAEFCFRWIDSIFE 167 Query: 139 -----QQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 Q R L + +E FY F + SRG L A + RDE+ Sbjct: 168 LRELRTQADRRAFLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDES 227 Query: 194 VHGYYIGYKYQKNMEKISLGQREELKSFAFDL-------LLELYDNELQYTDELYAETPW 246 +H + + + + EE F DL + E D E+Q+ ++L + Sbjct: 228 MHMAFA-------FDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVS 280 Query: 247 A---DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSS 303 D++ +L + A++ L+ LG P++ NP L + E +FF S+ Sbjct: 281 GLSLADMREYLQHVADRRLVTLGIAPMY----GSANPFAFMELQ-DVQELSNFFERRVSA 335 Query: 304 YVMG-KAVETEDEDW 317 Y MG T D+D+ Sbjct: 336 YQMGVSGSVTFDDDF 350 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 30/297 (10%) Query: 27 TSNFWLPEKVPLSNDIPAWQT-LTVVEQQ---LTMRVFTGLTLLDTLQNVIGAPSLMPDA 82 +S FW +++ + DI + +T E T+R+FT L+ +G ++ Sbjct: 26 SSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGRDYWLG--RVLKTF 83 Query: 83 LTPHEEAVLSNISFMEA-VHARSYSSIFSTL-CQTKDVDAAYAWSEENAP-LQRKAQIIQ 139 P E + + F E VHA Y+ I L T + AY N P L+ + + + Sbjct: 84 PRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYV----NDPILKERMEFVD 139 Query: 140 QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG--KLTNTADLIRLIIRDEAVHGY 197 DDPL A +E + YS F +F ++G KL N I +RDE +H Sbjct: 140 SLVEEDDPLYSLGAFSMVEGAVLYSSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCE 199 Query: 198 YIGYKYQKNMEKISLGQREELKSFAFDL---LLELYDNELQYTDELY----AETPWADDV 250 + Y ++I + +DL + ++E + D ++ E A+ + Sbjct: 200 GGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQM 259 Query: 251 KAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAAL---SPNADENHDFFSGSGSSY 304 K F+ N L LG EP+F EV+ I+A N HDFFSG G+SY Sbjct: 260 KTFVKSRVNICLAQLGIEPVF-----EVSNNIVAEWFYDGINGVMFHDFFSGIGNSY 311 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 60/301 (19%), Positives = 132/301 (43%), Gaps = 32/301 (10%) Query: 27 TSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG---APSLMPDAL 83 +N WLP ++P+ DI W++ + E + + + L T ++++G ++ Sbjct: 47 CANNWLPTEIPMGKDIELWKSDRLSEDERRV-ILLNLGFFSTAESLVGNNIVLAIFKHVT 105 Query: 84 TPHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAY-----AWSEENAPLQRKAQI 137 P L +F EAVH ++ I +L K++ AY ++++ ++ ++ Sbjct: 106 NPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKV 165 Query: 138 IQQHYRGD--DPLKKKIAS-----VFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 + ++R D + L++ + + + +E FYSGF + + F + K+ + + I+R Sbjct: 166 LDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILR 225 Query: 191 DEAVHGYY----IGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 DE +H + I ++N E + EL+ +L+ D E++Y + Sbjct: 226 DETIHLNFGIDLINGIKEENPEIWT----PELQQEIVELIKRAVDLEIEYAQDCLPRGIL 281 Query: 247 ADDVKAFLCYN---ANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSS 303 F+ Y A++ L +G +P++ + NP + + + ++ +FF Sbjct: 282 GLRASMFIDYVQHIADRRLERIGLKPIYHTK----NPFPWMSETIDLNKEKNFFETRVIE 337 Query: 304 Y 304 Y Sbjct: 338 Y 338 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 42/281 (14%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQL---TMRVFTGLTLLDTLQNVIGAPS 77 E++ + W PE++ + D+ +++LT E+ L ++ F LL +QNV+G Sbjct: 29 EIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELL--VQNVLGN-G 85 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 P P+ + S FME +H+ + I +T D Y + E+ L K ++ Sbjct: 86 FFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEM--DRKRIYNITLEDKLLMEKQEL 143 Query: 138 IQQ-----HYRGDDP----LKKKIASVFL------ESFLFYSGFWLPMYFSSRGKLTNTA 182 I + Y DP KK+I + L E FYS F GK+ N Sbjct: 144 IIRAVDRITYGKADPDTLEGKKQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVV 203 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKI--------SLGQREELKSFAFDLLLELYDNEL 234 + LI+ DE++H Q +E I + E+ + +++ + EL Sbjct: 204 SGVELILIDESLH-------LQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELEL 256 Query: 235 QYTDELYAETPW----ADDVKAFLCYNANKALMNLGYEPLF 271 Y + T +++ ++ Y A++ L LG++P F Sbjct: 257 NYLKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQF 297 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 26/308 (8%) Query: 27 TSNFWLPEKVPLSNDIPAWQ---TLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDAL 83 +N W+P+++ +S DI W+ LT E+++ R D+L Sbjct: 101 CANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 160 Query: 84 TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYR 143 P L +F EA+H +Y I +L + + A+ E + + +I + Sbjct: 161 APECRQFLLRQAFEEAIHTHAYQYIVESLG-LDEGEIFNAYHEVTSIRAKDEFLIPFIHT 219 Query: 144 GDDPLKKK--------------IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 DP K + + +E FY GF + + K+T A+ + I+ Sbjct: 220 LTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYIL 279 Query: 190 RDEAVH-GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 RDE++H + I Q +E L E ++ +L + + E +Y ++ Sbjct: 280 RDESMHCNFGIDLINQIKLENPHLWT-AEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338 Query: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 A K++L + +N+ +G +PLFP E NP + + + +FF Y Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEE---NPFPWMSEMIDLKKERNFFETRVIEYQ 395 Query: 306 MGKAVETE 313 G A+ E Sbjct: 396 TGGALSWE 403 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 24/240 (10%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 S FW PE+V ++ D + TLT E+++ T+LD++Q + P A TP Sbjct: 48 SQFWRPEEVDITKDKADYATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEM 107 Query: 88 EAVLSNISFMEAVHARSYSSIFS------------TLCQTKDVDAAYAWSEENAPLQRKA 135 + + + EA+H+ SY+ I L + VD A+ S + R + Sbjct: 108 QFAVLEWTRQEAIHSLSYTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDDMVRYS 167 Query: 136 --QIIQQHYRGDDPLKKK-------IASVFLESFLFYSGFWLPMYFSS-RGKLTNTADLI 185 ++ + + +D + K A+ LE FY F F+ + K+ A +I Sbjct: 168 GMRMAGRAFTREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKII 227 Query: 186 RLIIRDEAVHGYYIGYKYQK--NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE 243 R I RDE H + M+ REEL+ + L++ + E Q+ D L+ + Sbjct: 228 RQIARDEQDHLILTQTLLNRLPGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQD 287 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 18/188 (9%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPA-WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL 78 L ++ + +N+W+PE+ L+ND ++ L +E+ + + + + +G L Sbjct: 34 LNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHT---VGFFSSAEGWVGQNIL 90 Query: 79 -MPDALTPHEEAVLSNISFMEAV-HARSYSSIFSTL-CQTKDVDAAYAWSEENAPLQRKA 135 + + E + ME + H ++ I L + +V YA E ++RKA Sbjct: 91 EISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEV---YAMHENVKEIKRKA 147 Query: 136 --QIIQQHYRGDDPLKKK-IASVF-----LESFLFYSGFWLPMYFSSRGKLTNTADLIRL 187 ++ + ++P ++ I +F LE F+SGF P+ F RG L N A L+R Sbjct: 148 DFEVKRAMALCEEPTEENLIEDIFVYYAILEGLFFFSGFVTPLAFGRRGVLKNVAALVRW 207 Query: 188 IIRDEAVH 195 I++DE H Sbjct: 208 ILKDETRH 215 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/341 (21%), Positives = 131/341 (38%), Gaps = 50/341 (14%) Query: 23 WNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD 81 W++ + WLP +VP+ +D+ W+ L ++ +F T D +P Sbjct: 22 WDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVASAYYTQYLPF 81 Query: 82 ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQH 141 P ++ + E VH +YS + TL + + EE ++ K I++ Sbjct: 82 FKLPEVTMMMGGFAGREGVHIDAYSYLLETLGMPEATYKEFLMYEE---MKDKQDYIKKF 138 Query: 142 Y-------RGDDPL----KKKIA------SVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 +G++ L K+ IA S F E +S F + + F G + + Sbjct: 139 SDSRHILGKGEENLTTEDKEHIAAGIALFSGFTEGMQLFSTFAMLLIFPLNGFMKGMGQI 198 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE------------------ELKSFAFDLL 226 + I DE H + ++ +E+ G + L+ DL+ Sbjct: 199 VTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLEEAFIDLV 258 Query: 227 LELY-------DNELQYTD--ELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAE 277 + Y DN+L+ D + + TP +KA++ Y A++ L +GY+ +F E Sbjct: 259 FKKYKDEPINDDNDLETKDNKDFFGLTP--QRLKAYIKYIADRRLNLMGYKSIFNLEPYP 316 Query: 278 VNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 NP + NA + +FF + Y T E WN Sbjct: 317 TNPLPELEIMINAPTHTNFFENRSTDYANVSTKGTWSEIWN 357 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 35/308 (11%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQ--LTMRVFTGLTLLDTLQNVIGAPSL 78 E W + W+ E+VPL D+ W + V +Q+ L ++F T D + Sbjct: 36 EFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDVEVSDNYLKRY 95 Query: 79 MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQII 138 MP + +++ + ME +H +Y+ + +TL + +A+ + A ++ KA + Sbjct: 96 MPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLGMPRTEFSAF---RDYAAMRDKADYM 152 Query: 139 QQHYRG---DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 G D + F E ++ F + + F K+ ++ +RDE++H Sbjct: 153 HTFGVGTMADVSRTLAMFGAFTEGMALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLH 212 Query: 196 GYYIGYKYQK-NMEKISLGQREELKSFAFDLLLELYDNELQYTD---ELYA-ETPWADDV 250 I + + N E +L + ++ D+ + E ++ D EL A E A+D+ Sbjct: 213 CQGIIRLFHEWNRETGALTK--PVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDI 270 Query: 251 KAFLCYNANKALMNL--------------GYEPLFPAEMAEVNPAILAALSPNADENHDF 296 K+++ Y A+ L L GYE L P + P ++ L N E+ +F Sbjct: 271 KSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPL----PWLVEIL--NGVEHANF 324 Query: 297 FSGSGSSY 304 F + Y Sbjct: 325 FEQRSTEY 332 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 25/195 (12%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLT---MRVFTGLTLLDTLQNVIGA 75 E + + +N W PE+V + DI WQ LT E+QL + F+ L T N++ A Sbjct: 25 EYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESL-TANNIVLA 83 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 + P L ++ EAVH ++ I+ D + Y + + K Sbjct: 84 --IYEYVTAPECRQYLLRQAYEEAVHTDTF--IYCCDSLGFDPEHMYGMYDRIPSIAEKD 139 Query: 136 QIIQQHYRGDDPLKKKIAS---------------VFLESFLFYSGFWLPMYFSSRGKLTN 180 + + R D I + V +E FY+GF + + RGK+ Sbjct: 140 EFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFYVIMEGIFFYAGFAMMLALKRRGKMVG 199 Query: 181 TADLIRLIIRDEAVH 195 + I+RDE++H Sbjct: 200 VGEQFEYIMRDESLH 214 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 6/181 (3%) Query: 21 EVWN---RLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPS 77 E+W R ++FW E++ LS+D+ W LT E+ R+ D + N Sbjct: 52 EIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFLSRILAFFASSDGIVNENLVER 111 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQ-TKDVDAAYAWSEENAPLQRKAQ 136 + P +E VH+ +YS + T + ++ D + E +QRKA+ Sbjct: 112 FSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDPEERDFLFRAIETIPSIQRKAE 171 Query: 137 --IIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAV 194 + + ++ +A +E F F + RG L LI RDE + Sbjct: 172 WALTWTSDKSTTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGM 231 Query: 195 H 195 H Sbjct: 232 H 232 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 66/329 (20%), Positives = 130/329 (39%), Gaps = 51/329 (15%) Query: 28 SNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE 87 S FW ++ L D W L Q++T+ T D+ + ++MP P Sbjct: 44 SQFWTETEISLEADKKQWPNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPEL 103 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQ--TKDVDAAYAWSEENAPLQRKAQIIQQHY--- 142 E +L S+ E +H+R+YS+I + + +D+ E A + ++ + Y Sbjct: 104 EGMLKQWSYFEDLHSRAYSNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLG 163 Query: 143 ---------RGDDP--------LKKKIASVFLESFL---------FYSGFWLPMYFSSRG 176 RGD+ +K++ + L+++ FY+ F + Sbjct: 164 QYFIAVRDHRGDNTYPETEFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAEND 223 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 L A ++LI +DEA+H Q ++ +E + A LL+ E+++ Sbjct: 224 ILQGIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEW 283 Query: 237 TDELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVN----PAIL----- 283 ++ A+ ++ +L + A M++G E +P+ + + P I+ Sbjct: 284 GHFIFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVE--WPSHLPVITKNPIPWIMNWLDT 341 Query: 284 AALSPNADENHDFFSGSGSSYVMGKAVET 312 +L P E G++Y +G+ ET Sbjct: 342 TSLQPAPQEIQ-----IGAAYRVGQVTET 365 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 11/216 (5%) Query: 22 VWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 ++ + ++FW +++ LS D+ W + L E+ V D + A Sbjct: 107 MYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGADGIVVENLAERFCR 166 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIF-STLCQTKDVDAAYAWSEENAPLQRKAQIIQ 139 + P A ME +H +Y + S + KD + +A + +++KA+ Q Sbjct: 167 EVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPSVEKKARWAQ 226 Query: 140 QHYRGDDPLKKKIASVFLESFLFYSGFWLPMY-FSSRGKLTNTADLIRLIIRDEAVHGYY 198 ++ D +++ + +F+SG + ++ RG + LI RDE +H + Sbjct: 227 RYIGSDASFAERLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSF 286 Query: 199 IGYKYQKNMEKIS-------LGQREEL-KSFAFDLL 226 Y K K+S +G+ E+ K F D L Sbjct: 287 ACQLYSKLERKLSETDMHKLIGEAVEVEKGFVCDAL 322 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 27/312 (8%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 E W + + WL ++ + +DI W + LT E+ + + G +T V S M Sbjct: 20 EYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTET--EVGNYWSEM 77 Query: 80 PDALTPHEEAVLSNISF--MEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 P E + +F E +HA +YS + L +D +A+ E++ + + + Sbjct: 78 IPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDIL----GLDNFHAFLEDDVIMNKLKSL 133 Query: 138 I----QQHYR-GDDPLKKKIA--SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 + H + + + + +A S E +S F + + F +L I +R Sbjct: 134 MDVRNSDHGKYNKEEIARSVALFSAAAEGVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVR 193 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE----TPW 246 DE++H G K + + + G +E ++ + + NE + D+++ T Sbjct: 194 DESLHS-EAGCKIFRTFCEENKGLKEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIK 252 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 +++K F+ AN L LG+ + + ++ ++ + ++ DFF + Y Sbjct: 253 REELKNFMKDRANMKLRELGFFDSYHVDRRMLDNMNWFYITISGEQQTDFFDNRETGY-- 310 Query: 307 GKAVETEDEDWN 318 +EDWN Sbjct: 311 ----SKPNEDWN 318 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 39/323 (12%) Query: 23 WNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD 81 W+ W +++ + +D+ W L+ E+ +++ T D + +G + Sbjct: 65 WDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGD-VDVAVGYVQYLQL 123 Query: 82 ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQII-QQ 140 P +L + EA+H SYS + STL D Y + ++ K + + Sbjct: 124 FQQPEVRMMLFSFGAREAMHIASYSHLISTLNLP---DVTYQEFLKYKAMKDKHEFVFNS 180 Query: 141 HYR-------------GDDPLKKKIA------SVFLESFLFYSGFWLPMYFSSRGKLTNT 181 ++ G D ++IA S F+E +S F + + F+ G + Sbjct: 181 RFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGVQLFSSFIMLLNFTRHGLMKKM 240 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQ----KNMEKISLGQREELKSFAFDLLLELYDN--ELQ 235 +I+ I DE H + + +N I LG E +++L D +L Sbjct: 241 GQIIQWSIADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLA 300 Query: 236 YT-DELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 ++ E+ T ADDVK+++ Y N+ L +GY PL+ NP NA + Sbjct: 301 FSMGEMRQLT--ADDVKSYIRYITNRRLQTMGYLPLYSVVE---NPLPWVEDLLNAPSHT 355 Query: 295 DFFSGSGSSYVMGKAVETEDEDW 317 +FF + Y KA T D W Sbjct: 356 NFFENKPTEY--AKASLTGDWPW 376 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 70/321 (21%), Positives = 126/321 (39%), Gaps = 33/321 (10%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 E++ N W E++ L +D+ L+ E+ L R+ DT+ +L Sbjct: 54 EMFRDAIKNTWTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLY 113 Query: 80 PDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQRKA--- 135 +P LS F EAVH + Y ++ T + A+A E ++ KA Sbjct: 114 EHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFC 173 Query: 136 -----------QIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 Q+ + R L +E FY F + SRG L A Sbjct: 174 FTWIDSIENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASG 233 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE----ELKSFAFDLLLELYDNELQYTDEL 240 + RDE++H + + ++ +E + + + E+ +L+E D E Q+ ++L Sbjct: 234 TNWVFRDESMH---MAFAFEV-VETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDL 289 Query: 241 YAETPWA---DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 D++A+L A++ + LG ++ + NP L + E +FF Sbjct: 290 LGMGVAGLSVADMRAYLENVADRRAVQLGMPEIYGTK----NPLAFMELQ-DVQELSNFF 344 Query: 298 SGSGSSYVMG-KAVETEDEDW 317 S+Y +G + + DED+ Sbjct: 345 ERRVSAYQVGVEGSVSFDEDF 365 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 65/321 (20%), Positives = 128/321 (39%), Gaps = 34/321 (10%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG--APSL 78 +++ + +N W PE +P+ DI W+ V Q + G+ + ++G + Sbjct: 49 DLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSAAEGIVGDNIQHV 108 Query: 79 MPDALT-PHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAYAWSEENAPLQRKAQ 136 + +T P + VL + E +HA S + S+L + +A + E+ + RK + Sbjct: 109 TRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMF---EDIPTIVRKNE 165 Query: 137 IIQQHYRG-------DDPLKKKIAS--VFL-----ESFLFYSGFWLPMYFSSRGKLTNTA 182 + ++ R P K++ + +FL E FY F + + + K Sbjct: 166 FVVKNSRQLRRDLDLTQPENKQLLARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIG 225 Query: 183 DLIRLIIRDEAVH----GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 + R +RDE+ H + ++N E + G +EEL+ + + E E ++ Sbjct: 226 QMFRYTLRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELR----ETMREAVTLEKEFIR 281 Query: 239 ELYAETPWADDVKAFLC---YNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 + V FL Y A++ L +G P+ + NP A + + + Sbjct: 282 DCLPVNAVGLAVDEFLTYIDYIADRRLEGVGLAPISATPIK--NPLPWLAEMMDIKKEQN 339 Query: 296 FFSGSGSSYVMGKAVETEDED 316 FF G + Y ++ +D Sbjct: 340 FFEGRVTEYQKASSLAVTHDD 360 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 52/257 (20%), Positives = 100/257 (38%), Gaps = 20/257 (7%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 E + + ++FW E+V + D+ W L EQ+ V D + A M Sbjct: 189 EFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIKYVLAFFAASDGIVMENLAARFMS 248 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP-LQRKAQIIQ 139 D P A ME VH+ YS + + + + P + +KA+ Sbjct: 249 DIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPEERNQLFDAIHTIPTVAKKAEWAM 308 Query: 140 QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII-RDEAVHGYY 198 + + +++ + +SG + +++ + L ++I RDE +H + Sbjct: 309 RWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDF 368 Query: 199 IGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-------ADDVK 251 Y ++S RE +L++ D +Q DE E AD ++ Sbjct: 369 ACCLYSHLKNRLS---RER--------VLQIVDEAVQLEDEFCTEALSCELLGMNADLMR 417 Query: 252 AFLCYNANKALMNLGYE 268 ++ + A++ L++LGYE Sbjct: 418 QYIRFVADRLLVSLGYE 434 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 11/259 (4%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++ + ++FW E+V LS D+P W L E+ + D + N Sbjct: 54 KMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQ 113 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQ 140 + P +E VH+ YS + T + + E P +K Sbjct: 114 EVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWAL 173 Query: 141 HYRGDDPL---KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGY 197 + D ++ +A +E F F + RG + LI RDE +H Sbjct: 174 RWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 233 Query: 198 YIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDV--KAFLC 255 + +Q + K S + E+ A + E T+ L + + K ++ Sbjct: 234 FACLMFQYLVNKPSEERVREIIVDAVKIEQEF------LTEALPVGLIGMNCILMKQYIE 287 Query: 256 YNANKALMNLGYEPLFPAE 274 + A++ L+ LG+ +F AE Sbjct: 288 FVADRLLVELGFSKVFQAE 306 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 25/199 (12%) Query: 22 VWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL--M 79 ++ ++ +N W P+ + ++ D W T + ++ + + G+ + ++G L + Sbjct: 79 IYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI-IEMGVGYFSAAEGIVGDSVLHVI 137 Query: 80 PDALTPHE--EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 D LT E A L +I+ E++H S I +L D+D A + +QRK Sbjct: 138 EDNLTAAELKHASLRHIA-EESIHMDSLLHIIGSL--NIDLDEVTAKFSDIPSVQRKNAF 194 Query: 138 IQQHY----RGDDPL----KKKIASVF------LESFLFYSGFWLPMYFSSRGKLTNTAD 183 I +H G D K+K A +E FY+ F + + + K+T Sbjct: 195 ITRHMPELKMGIDLTQTANKQKFAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQ 254 Query: 184 LIRLIIRDEAVH---GYYI 199 + + +RDE+ H G YI Sbjct: 255 MFQYTLRDESNHIELGRYI 273 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 17/174 (9%) Query: 31 WLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEE 88 W+ +++ LS D+ W+ +T VE++ + T D +P Sbjct: 120 WIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAVGQNYYDQFIPLFKNNEVR 179 Query: 89 AVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGD-DP 147 +L + + E +H R+Y+ + TL SE +A L+ KA + + D +P Sbjct: 180 NMLGSFAAREGIHQRAYALLNDTLGLPD--------SEYHAFLEYKAMTDKIDFMMDANP 231 Query: 148 LKKK------IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 ++ +VF E ++ F + + F GK+ ++ IRDE++H Sbjct: 232 NTRRGLGLCLAKTVFNEGVALFASFAMLLNFQRFGKMKGMGKVVEWSIRDESMH 285 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 4/190 (2%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 E + S FW E+V ++ D + TLT EQ V D + N Sbjct: 48 EFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSS 107 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQ 140 + + +E +H+ YS + TL + K+ + EN P RK + Q Sbjct: 108 EVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQ 167 Query: 141 HYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYY 198 + D + +A +E F F + RG + LI RDE +H + Sbjct: 168 KWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDF 227 Query: 199 --IGYKYQKN 206 + +KY N Sbjct: 228 ACLLHKYINN 237 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 9/194 (4%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD--TLQNVIGAPS 77 +++ + T+ FW+ E++ LS D W+ + E+ V LD ++N+ + Sbjct: 121 FQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFFASLDQIVMENI--GLN 178 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 + + P + EAVH SYS + T + + S + P+ K + Sbjct: 179 FKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPIIEKKAL 238 Query: 138 IQQHYRGDDP---LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAV 194 + + + ++ + LE F F + R K + LI RDE + Sbjct: 239 WAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGL 298 Query: 195 HGY--YIGYKYQKN 206 H + YK+ KN Sbjct: 299 HATASVLIYKHLKN 312 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 4/137 (2%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I K E + S FW PE+V L D + L +Q + +LLD++Q Sbjct: 30 IQRHKVFEELIEILSFFWRPEEVNLMLDSAQFNKLPQFQQDICTNNLKYQSLLDSIQGRA 89 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + LM P + ++ +F E +H+RSY+ I L D + + + + Sbjct: 90 PSAVLMALISDPSLDTWVATWTFSETIHSRSYTHIMRNL--YTDPSKVFDEIVLDEAIMK 147 Query: 134 KAQIIQQHYRGDDPLKK 150 +A+ I ++Y DD L K Sbjct: 148 RAESIGKYY--DDVLVK 162 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 392 e-108 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 358 1e-97 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 357 3e-97 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 355 2e-96 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 337 3e-91 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 331 1e-89 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 331 1e-89 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 328 2e-88 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 315 1e-84 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 304 2e-81 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 302 9e-81 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 299 8e-80 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 289 6e-77 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 288 1e-76 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 287 3e-76 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 286 8e-76 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 286 9e-76 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 283 4e-75 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 280 5e-74 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 278 2e-73 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 271 2e-71 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 268 2e-70 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 267 5e-70 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 264 2e-69 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 264 4e-69 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 261 2e-68 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 260 4e-68 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 259 7e-68 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 254 4e-66 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 253 5e-66 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 253 5e-66 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 251 2e-65 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 248 1e-64 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 247 4e-64 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 246 6e-64 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 239 1e-61 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 238 2e-61 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 237 3e-61 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 237 5e-61 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 235 1e-60 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 235 2e-60 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 233 6e-60 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 227 3e-58 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 226 6e-58 UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 221 2e-56 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 220 5e-56 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 216 7e-55 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 212 2e-53 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 209 2e-52 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 206 8e-52 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 205 2e-51 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 199 8e-50 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 198 3e-49 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 191 2e-47 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 189 1e-46 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 189 1e-46 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 186 8e-46 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 184 3e-45 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 174 4e-42 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 100 5e-20 Sequences not found previously or not previously below threshold: UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 222 1e-56 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 219 1e-55 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 210 5e-53 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 210 6e-53 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 208 2e-52 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 204 5e-51 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 201 2e-50 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 194 4e-48 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 194 5e-48 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 193 7e-48 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 190 5e-47 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 190 8e-47 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 189 8e-47 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 187 4e-46 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 185 2e-45 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 183 9e-45 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 173 6e-42 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 172 1e-41 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 168 2e-40 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 160 9e-38 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 156 1e-36 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 155 3e-36 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 153 1e-35 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 145 2e-33 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 145 2e-33 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 137 7e-31 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 132 1e-29 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 130 5e-29 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 128 2e-28 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 128 4e-28 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 123 7e-27 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 120 7e-26 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 120 1e-25 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 119 1e-25 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 115 2e-24 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 115 2e-24 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 115 3e-24 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 114 4e-24 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 114 5e-24 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 112 2e-23 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 111 2e-23 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 111 3e-23 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 111 4e-23 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 102 2e-20 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 101 2e-20 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 97 6e-19 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 97 1e-18 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 90 9e-17 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 89 2e-16 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 88 3e-16 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 88 4e-16 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 88 4e-16 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 87 7e-16 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 86 2e-15 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 83 1e-14 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 81 6e-14 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 79 2e-13 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 76 2e-12 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 76 2e-12 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 76 2e-12 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 72 3e-11 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 72 4e-11 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 70 7e-11 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 70 7e-11 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 70 1e-10 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 67 1e-09 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 65 3e-09 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 64 7e-09 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 63 1e-08 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 60 1e-07 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 58 4e-07 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 55 3e-06 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 55 3e-06 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 55 3e-06 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 55 4e-06 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 53 1e-05 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 52 2e-05 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 52 3e-05 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 51 4e-05 UniRef50_Q93L72 Ribonucleotide reductase small subunit (Fragment... 49 2e-04 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 48 6e-04 UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain ... 46 0.002 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 45 0.004 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 45 0.004 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 44 0.006 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 41 0.052 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 392 bits (1007), Expect = e-108, Method: Composition-based stats. Identities = 226/317 (71%), Positives = 271/317 (85%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + R+SAINWN + DDKD EVW+RLT NFWLPEKVP+SND+P+W TLT E+QLTMRVFTG Sbjct: 9 IDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTG 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q +GA SL+PDALTPHEEAV +NI+FME+VHA+SYSSIFSTLC T ++D A+ Sbjct: 69 LTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAF 128 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 WSEEN LQRKA+I+ ++YRGD+PLK+K+AS LESFLFYSGF+LPMY+SSR KLTNTA Sbjct: 129 RWSEENNNLQRKAKIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTA 188 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 D+IRLIIRDEAVHGYYIGYK+Q+ + + +R ELK + ++LL ELYDNE++YT +LY Sbjct: 189 DMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLYD 248 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 +DVK FL YNANKALMNLGYE LFP + +VNPAIL+ALSPNADENHDFFSGSGS Sbjct: 249 RVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGS 308 Query: 303 SYVMGKAVETEDEDWNF 319 SYV+GKAV TEDEDW+F Sbjct: 309 SYVIGKAVVTEDEDWDF 325 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 152/318 (47%), Positives = 208/318 (65%), Gaps = 3/318 (0%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 +++ AINWN++SD D W +LT FWL ++P++ND+ W+ L Q VF G Sbjct: 9 VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGG 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q+ G +L D TPHE AVL+NI FME+VHA+SYS+IFSTL + + Sbjct: 69 LTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIF 128 Query: 123 AWSEENAPLQRKAQIIQQHYR--GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 WS+ LQ KA I Y DPLKKK+A+VFLE+FLFYSGF+ P+Y+ KL N Sbjct: 129 EWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFLFYSGFYTPLYYLGHNKLNN 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 A++I+LI+RDE+VHG YIGYK+Q + + Q++++K + ++ L ELYDNE +YT L Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 Y + W DDV F+ YNANKALMNLG +PLFP ++VNP ++ +S + NHDFFS Sbjct: 249 YDQVGWTDDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVVMNGISTSTS-NHDFFSQV 307 Query: 301 GSSYVMGKAVETEDEDWN 318 G+ Y MG D D++ Sbjct: 308 GNGYRMGAVEAMNDSDYD 325 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 357 bits (916), Expect = 3e-97, Method: Composition-based stats. Identities = 146/316 (46%), Positives = 212/316 (67%), Gaps = 1/316 (0%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + AI+WN++ D D W +LT FWL ++P+SND+ W+TL+ E+ + +VF G Sbjct: 29 VEYYKAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGG 88 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDTLQ+ GA + T HEEAV +NI FME+VHA+SYS+IFSTL +++ + Sbjct: 89 LTLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIF 148 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 W+ N LQ KA+ I + Y+ D LK K+AS LE+FLFYSGF+ P+Y+ KL N A Sbjct: 149 EWTNNNEYLQFKAKKINEIYQSKDALKMKVASTMLETFLFYSGFFTPLYYLGNNKLANVA 208 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 ++I+LIIRDE+VHG Y GYK+Q+ ++S ++EE+K + ++L LELY NE++YT +Y Sbjct: 209 EIIKLIIRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIYD 268 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 + W + VK F+ YNANKAL NLG++PLFP +V+P ++ +S NHDFFS G+ Sbjct: 269 QVGWTEKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGIST-GTSNHDFFSQVGN 327 Query: 303 SYVMGKAVETEDEDWN 318 Y++G +DED++ Sbjct: 328 GYLLGSVEAMDDEDYS 343 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 355 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 137/319 (42%), Positives = 200/319 (62%), Gaps = 8/319 (2%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 + A+NWN+ DD L W + FW E++PLS+D W ++ E+ + V GLTL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q +G P ++ +AVL+ +S ME +HA+SYSSIF+TL T+++DA + W Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 126 EENAPLQRKAQIIQQHYRG----DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 E N LQ+KA ++ Y+G K ASVFLES+LFYSGF+ P+Y + +GK+T++ Sbjct: 121 ETNEQLQKKATLVSSWYQGIETKQQLYKAMAASVFLESYLFYSGFFYPLYLAGQGKMTSS 180 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 ++I LI+RDE++HG Y+G Q+ + + ++ +LK F LL LY+NE+ YTD LY Sbjct: 181 GEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQAQLKEEVFALLNTLYENEVVYTDNLY 240 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + +DVKA++ YNANKALMNLG+EP FP E VNP + +S + + HDFFS G Sbjct: 241 SPIGLQEDVKAYVRYNANKALMNLGFEPYFPEE--PVNPIVFNGISTHTKQ-HDFFSKKG 297 Query: 302 SSYVMGKAVE-TEDEDWNF 319 + YV +E DED+ F Sbjct: 298 NGYVRTVHIEQLRDEDFVF 316 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 337 bits (865), Expect = 3e-91, Method: Composition-based stats. Identities = 161/317 (50%), Positives = 217/317 (68%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + ++NWN + D+KDLEVWNR+ NFWLPEK+P+SNDIP+W+ L+ Q L + FTG Sbjct: 24 QGNLRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTFTG 83 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q IG + ALT HE+ + +N +FM VHARSY +IFSTLC ++ ++AA+ Sbjct: 84 LTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINAAH 143 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 W LQ++A+ + +Y G+DPLK K+A+ + FL Y GF+LP Y SSR +L NT+ Sbjct: 144 EWVVNTESLQKRAKALIPYYTGNDPLKSKVAAALMPGFLLYGGFYLPFYLSSRKQLPNTS 203 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 D+IRLI+RD+ +H YY GYKYQ+ +EK+ L +++E+K+F F+L+ L + E Y ELY Sbjct: 204 DIIRLILRDKVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYLKELYE 263 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 DD F YNA K L NLGY+ F A + P I A LS ADENHDFFSG+GS Sbjct: 264 GFGIVDDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGS 323 Query: 303 SYVMGKAVETEDEDWNF 319 SYVMG + ET D+DWNF Sbjct: 324 SYVMGVSEETNDDDWNF 340 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 331 bits (850), Expect = 1e-89, Method: Composition-based stats. Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 7/315 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRGDDPLK----KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 ++I LI+RDE++HG YIG Q+ + ++ L+ + +L L +NE++YT+ +Y Sbjct: 190 EIISLILRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYR 249 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E+ +V FL YNAN+AL NLG+E L+ + +NP +L LS + HDFFS G+ Sbjct: 250 ESGLEKEVVNFLKYNANRALENLGFEKLYTVDA--INPIVLNGLSTET-KTHDFFSTKGN 306 Query: 303 SYVMGKAVETEDEDW 317 Y G E EDED+ Sbjct: 307 GYQKGVYEELEDEDF 321 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 331 bits (850), Expect = 1e-89, Method: Composition-based stats. Identities = 139/321 (43%), Positives = 200/321 (62%), Gaps = 10/321 (3%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 A NW+K DD +N+ FWLPE++ L+ D+ W+ L EQ M+V GLTL Sbjct: 5 YDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTL 64 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFME-AVHARSYSSIFSTLCQTKDVDAAYAW 124 LDT Q G P + +AVL+ ++ ME AVHA+SYS+IF TL T+ ++ + W Sbjct: 65 LDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEW 124 Query: 125 SEENAPLQRKAQIIQQHY---RGDD---PLKKKIASVFLESFLFYSGFWLPMYFSSRGKL 178 ++N LQ+KAQ+I Y + DD K +ASV+LESFLFYSGF+ P+YF +GKL Sbjct: 125 VKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKL 184 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 + ++I LI+RDEA+HG Y+G Q+ K + ++ EL+ FA DLL +LY+NEL+YT+ Sbjct: 185 MQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTE 244 Query: 239 ELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFS 298 +LY + + DVK F+ YNANKALMNLG++P F E ++NP +L L+ ++HDFFS Sbjct: 245 DLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEE--DINPIVLNGLNTKT-KSHDFFS 301 Query: 299 GSGSSYVMGKAVETEDEDWNF 319 G+ Y +D+D+ F Sbjct: 302 MKGNGYKKATVEPLKDDDFYF 322 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 115/317 (36%), Positives = 168/317 (52%), Gaps = 7/317 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 SA NW+++ D + + + W E++P+++D W+ L+ E+ RV GL + Sbjct: 4 SATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLNAM 63 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DTLQ +G P L +A L+ +FME VHARSYS T + A+ W E Sbjct: 64 DTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEWIE 123 Query: 127 ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 LQRK + ++ Y D L + +AS LE+ LFYSGF+ P+Y + +GK+++ ++ Sbjct: 124 MQPHLQRKITVFRRLYEEGDALTRMLASCLLETALFYSGFFYPLYLAGQGKMSHMGEVFT 183 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 LI DEA+HG Y+G +Q+ + G++ +++ L E Y+NE YTDE+YAE Sbjct: 184 LICADEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVYAEVGL 243 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS-SYV 305 A +VK F+ YN N NLG E LFP E EVNP +L + HDFFS G+ Y Sbjct: 244 ASEVKTFVRYNFNICCDNLGLERLFPEE--EVNPLVLNGIRATGGTTHDFFSIKGAGGYA 301 Query: 306 MGKAVETED----EDWN 318 A D E WN Sbjct: 302 KITAEPLTDAVVREAWN 318 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 194/320 (60%), Gaps = 11/320 (3%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 A+NWNK + + W++ W PE++ +S DI W++ Q +VF GLTL Sbjct: 2 YEAVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTL 59 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q IG + E+AVL+ EA+HA+SYS IF+TLC +++D + W Sbjct: 60 LDTVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWV 119 Query: 126 EENAPLQRKAQIIQQHYRG------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 ++N LQ KA I Y + K +SV LESFLFYSGF+ P+Y +G L Sbjct: 120 KKNEYLQYKANKIADIYNSIEEGDAESLWKAMFSSVMLESFLFYSGFFYPLYLGGQGFLR 179 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 N+A++I LI+RDE++HG +G+ Q ++ S ++E L+ + ++LLL+LY NE++YT++ Sbjct: 180 NSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQEALQLWGYELLLDLYQNEMKYTED 239 Query: 240 LYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 +YAET + +VKA++ YNANKALMN+G+E +FP E EVNP ++ + N +DFFS Sbjct: 240 IYAETGLSPEVKAYVRYNANKALMNVGFEAMFPEE--EVNPIVMNGIR-NEGSTYDFFSQ 296 Query: 300 SGSSYVMGKAVETEDEDWNF 319 G++Y K D+ +NF Sbjct: 297 KGATYAKAKVAPITDDTFNF 316 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 150/320 (46%), Gaps = 12/320 (3%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 S +NWN I+ + ++ +L SNFW+P+++ +S D+ W LT EQ R+ L++L Sbjct: 27 SIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQLTEREQDAFKRIIGLLSIL 86 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 D++Q S M + + AVL+ I+ E VH +SYS + S+L + + + ++ Sbjct: 87 DSVQTRYILESSMFSSDS-SVHAVLAVIAQQEVVHNQSYSYVLSSLVPLAEQNRIFNIAK 145 Query: 127 ENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 ++ + ++ Q I Y ++ K +ASV LE FYSGF + K+ Sbjct: 146 DDEMVMKRNQFILDLYEAFRETPNAENFAKSLVASVILEGINFYSGFAYFYNLARHQKMV 205 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISL-GQREELKSFAFDLLLELYDNELQYTD 238 T+ +I I RDE H Y+I + + + + + F +D + E D E+++ + Sbjct: 206 GTSTMISYIQRDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWCE 265 Query: 239 ELYAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHD 295 + + D +++ ++ Y ANK L +G L+ +V P I A + + D Sbjct: 266 YVLRDLDGLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSD 325 Query: 296 FFSGSGSSYVMGKAVETEDE 315 FF SY D+ Sbjct: 326 FFEQKSRSYAKVTDANGFDD 345 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 302 bits (774), Expect = 9e-81, Method: Composition-based stats. Identities = 118/322 (36%), Positives = 178/322 (55%), Gaps = 7/322 (2%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 MK +R AINWN++++ W++ FW+ E++P+S+D W TL E+ + +V Sbjct: 1 MKQNR-EAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVL 59 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 GLTLLDT Q +G P L + VL + ME +HA+SYSSIFS+L +D Sbjct: 60 GGLTLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDH 119 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDP----LKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + W + Q K +I Y K SVFLE+FLFYSGF+ P+Y + +G Sbjct: 120 IFGWVKTYRNFQDKLDLILGKYNSIHDRMSLYKALCTSVFLETFLFYSGFFYPLYLAGQG 179 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ N+ ++I LI+RDE+VHG ++G Q+ K++ ++ + A +L LY E Y Sbjct: 180 KMVNSGEIINLILRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAY 239 Query: 237 TDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 T +LY+ V F+ YNA+KALMNLG++ F +VNP +L L N + HDF Sbjct: 240 TKDLYSSIGLEGAVDVFVRYNADKALMNLGFDSAFNIRDIDVNPLVLNGLRTNT-KTHDF 298 Query: 297 FSGSGSSYVMG-KAVETEDEDW 317 FS G+ Y+ + +D+D+ Sbjct: 299 FSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 299 bits (766), Expect = 8e-80, Method: Composition-based stats. Identities = 116/328 (35%), Positives = 189/328 (57%), Gaps = 12/328 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 M+ A+NWN +D W + FW+ + S DI +W +L + + V Sbjct: 1 MEKKIYEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVL 60 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 GLTLLDTLQ+ G P ++ + +VLS + ME +HA+SYS+IF+T+ T++++ Sbjct: 61 GGLTLLDTLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINE 120 Query: 121 AYAWSEENAPLQRKAQIIQQHYR--------GDDPLKKKIASVFLESFLFYSGFWLPMYF 172 + W +EN LQ KA I +Y+ D ASV+LE++LFYSGF+LP++ Sbjct: 121 TFRWVQENPHLQYKANKIDTYYQKMNNPEASKRDIAMALAASVYLETYLFYSGFFLPLWL 180 Query: 173 SSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDN 232 + +G++ + D+I+ II DE++HG ++G +Q+ S ++ ++++ L+ +LY+N Sbjct: 181 AGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYEN 240 Query: 233 ELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 E +YTDE+Y + +VK ++ YNANKALMNLG+E F E+ VNP +L L+ + Sbjct: 241 ETRYTDEIYGDLGLTGNVKEYIRYNANKALMNLGFEEEF--EVKNVNPIVLNGLNVETTQ 298 Query: 293 NHDFFSGSGSSYVMG-KAVETEDEDWNF 319 HDFFS ++Y + V D+D+ F Sbjct: 299 -HDFFSKKSTNYEKALEVVHLHDDDFKF 325 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 12/319 (3%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 + +NW+ + ++ + +NFW P ++ +S+D + TLT EQ+ ++ L L Sbjct: 28 NVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFL 87 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 D++Q A++S +SF E VH +SYS + S+L D + + + Sbjct: 88 DSVQTDYSM-RAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWK 146 Query: 127 ENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 + L+ + + I Y L+ + V LE FYSGF + K+ Sbjct: 147 HDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMV 206 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 +T+ +I I RDE +H Y +++ + + EE K+F L++ D E + Sbjct: 207 STSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRY 266 Query: 240 LYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 + + +D++ ++ + ANK + LG E +P I A N+ ++ DF Sbjct: 267 IIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKS-DF 325 Query: 297 FSGSGSSYVMGKAVETEDE 315 F Y A DE Sbjct: 326 FEQKSRQYAKVSADNGFDE 344 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 12/321 (3%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + WN+I D +++ + +NFW+PE++ L+ D+ + LT E++ ++ L Sbjct: 22 NTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFPYLTDYERRAFDKIIAFL 81 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 LD++Q+ P+L ++L+ +F E +HA+SYS I T+ D Y Sbjct: 82 NFLDSIQSEN-LPNLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPITRDKIYD 140 Query: 124 WSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + L + + I Y+ + + IA+ LE FYSGF + +G Sbjct: 141 EWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFYSGFSFFYTLARQG 200 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+T T+ + + I RDE H ++ + EL++ D++ + +NE+ + Sbjct: 201 KMTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAW 260 Query: 237 TDELYAETPWADD---VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 + + + ++ ++ Y AN L +G L+P I + S Sbjct: 261 GQYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWI-ESFSNLNSTK 319 Query: 294 HDFFSGSGSSYVMGKAVETED 314 DFF ++Y A + +D Sbjct: 320 TDFFEAKVTNYTKAAAFDFDD 340 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 112/325 (34%), Positives = 174/325 (53%), Gaps = 14/325 (4%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 + A NW+K + L W + W E+ S D+ W+TL+ EQ+ ++ +GLT Sbjct: 6 KARATNWDK-DNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLT 64 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY-A 123 LDT Q G P L V + +S ME +H +SYS IF++L + KD Sbjct: 65 GLDTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKE 124 Query: 124 WSEENAPLQRKAQIIQQHYRG---DDPLKKKI-----ASVFLESFLFYSGFWLPMYFSSR 175 W N L +K ++I +Y +P ++I +S+FLESFLF+SGF+ P+Y + + Sbjct: 125 WVPANKYLNKKTKLITTNYYKLLKPNPTDREIYVAMASSIFLESFLFFSGFYYPLYLAGQ 184 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ ++ ++IR II DE +HG GY Q +K S ++E+++ +L +LY NE++ Sbjct: 185 GKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEEQEDIRKELMELFDQLYFNEVE 244 Query: 236 YTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 Y LY + +DV ++ YN N+ALMNLG+E +F E NP + L + NHD Sbjct: 245 YAASLYDKLGLTEDVIRYIQYNGNRALMNLGWETVFNPE--PFNPIVENGLRTDT-TNHD 301 Query: 296 FFSGSGSSYVMG-KAVETEDEDWNF 319 FFS G Y + V D+D++F Sbjct: 302 FFSVKGDGYTLALNQVPLRDKDFDF 326 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 12/318 (3%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + ++N + + + + +NFW+PE++ +S+D+ ++ L+ +E+ ++ + L Sbjct: 31 NTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFL 90 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 LD++Q P++ L+ +F EAVH++SYS + T+C ++ + Sbjct: 91 IFLDSIQTAN-LPNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDTICSPEERNDILY 149 Query: 124 WSEENAPLQRKAQIIQQHYRGDDP-------LKKKIASVFLESFLFYSGFWLPMYFSSRG 176 +++ L + + I Y LK IA+ LE FYSGF Sbjct: 150 QWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNN 209 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ + IR I RDE H + Q+ ++ D++ E + E+++ Sbjct: 210 KMPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKW 269 Query: 237 TDELYAE-TPWADD--VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE- 292 D + + P + V ++ Y N NLG+EPL+ E + NA+ Sbjct: 270 GDYVIGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLI 329 Query: 293 NHDFFSGSGSSYVMGKAV 310 DFF ++Y A+ Sbjct: 330 KTDFFEAKSTAYAKSSAM 347 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 286 bits (731), Expect = 9e-76, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 13/318 (4%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I +++ L NFW P ++ +S+DI W L+ E+ + + L++LD+ Sbjct: 29 LNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDIKQWHALSERERDAFLHIIGLLSILDS 88 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 +Q ++ P +A+ S I E VH +SYS + +++ + + A+ + N Sbjct: 89 VQ-PNFIGAMKEYITDPSVKAIFSIIEQQEVVHNQSYSYVLASIEKLSEQHRAFEMARTN 147 Query: 129 APLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 + ++ + + + Y + + +AS+ LE FYSGF + K+ T Sbjct: 148 PHIYKRNEHVIRVYEAFREQPTVETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKT 207 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNM-EKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 + +I I +DE H Y+I + + E + + ++ +D + E E +++ + Sbjct: 208 STMISYINKDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFV 267 Query: 241 YAETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHDFF 297 + D +++ ++ Y NK L LG + + A+ P I N + DFF Sbjct: 268 LRDIDGIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENS-MPWIRVFSDENVNLGKTDFF 326 Query: 298 SGSGSSYVMGKAVETEDE 315 SY V DE Sbjct: 327 EARPRSYTKTTDVNGFDE 344 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 131/318 (41%), Gaps = 12/318 (3%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + ++N + + + +NFW+PE++ LS D + L E+Q ++ + L Sbjct: 39 NTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYGELLGKERQAYDKILSFL 98 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 LD++Q+ P + LS +F E VH++SYS + T+C + + Sbjct: 99 VFLDSIQSAN-LPCIGEYITANEINLCLSIQTFQECVHSQSYSYMLDTICSPEKRNEILY 157 Query: 124 WSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + + L ++ I + Y LK +A+ LE FYSGF S G Sbjct: 158 QWKTDERLLKRNTFIGELYNEFQMKKDSFTLLKVMMANYILEGIYFYSGFMFFYNLSRNG 217 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ +A IR I RDE H + + E+ +E ++L+E + E+ + Sbjct: 218 KMPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAW 277 Query: 237 TDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE- 292 + + + + ++ Y N LG++ ++P E + NA+ Sbjct: 278 GHYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMV 337 Query: 293 NHDFFSGSGSSYVMGKAV 310 DFF ++Y A+ Sbjct: 338 KTDFFEAKSTAYAKSTAL 355 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 123/316 (38%), Gaps = 10/316 (3%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I + L++NFW+P++V + D + L+ E+ + L LD+ Sbjct: 34 LNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGELSAREKNAYDAIIGLLATLDS 93 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 Q ++ P A + I E +H SYS + +++ + + + + + Sbjct: 94 PQTRF-IYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITDLANQNRVFEIARTH 152 Query: 129 APLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 + ++ I Q Y + L I S LE FYSGF + ++T T Sbjct: 153 PTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 212 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 +I I RDE H +I + + + Q + L + + E Q+T E+ Sbjct: 213 GKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL 272 Query: 242 AETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 D ++ ++ Y ANK LG E L+ V P I A + DFF Sbjct: 273 NGIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEM 332 Query: 300 SGSSYVMGKAVETEDE 315 +SY D+ Sbjct: 333 RNASYKKTNVDNCFDD 348 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 124/317 (39%), Gaps = 11/317 (3%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN I +++ L N W+ +++P++ D + L EQ+ + L +LD+ Sbjct: 27 LNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDAQQFALLDPEEQRTFKINISLLAVLDS 86 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 +Q + + EA+ + I E VH +SYS + S++ ++ + + + + Sbjct: 87 MQTMFVGD-VKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSSIVSEQEQKEIFEYWKHD 145 Query: 129 APLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 L + + I Y+ + +A + LE FYS F + K+ T Sbjct: 146 PVLLDRNKFIANIYQNFRDEPTPQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGT 205 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 + +I I RDE H Y+ +++ + +E +A+ + + E + Sbjct: 206 SQMISYIQRDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL 265 Query: 242 AETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHDFFS 298 P D ++ ++ Y ANK L +G E + P I + DFF Sbjct: 266 KNVPGIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFE 325 Query: 299 GSGSSYVMGKAVETEDE 315 +Y D+ Sbjct: 326 AKSRNYGKVGDDNGFDD 342 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 159/296 (53%), Gaps = 1/296 (0%) Query: 2 KLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFT 61 K A NWN + + D W RL + P +VP+ D + L EQ + + F Sbjct: 3 KRPYYKANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFG 62 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 LTL TLQ + + DA E AV + + ++E+++ ++YS + + +K + A Sbjct: 63 SLTLSSTLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDA 122 Query: 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 Y W+ +N LQ+K + + Y+ + ++KK A VFL + L++S F+ P+Y + KL T Sbjct: 123 YEWANQNPYLQKKMKFLNTVYQSGNAIQKKAAHVFLSTGLYHSSFFGPLYLFGQHKLPRT 182 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 A+LI+ +R ++G Y G K++++ K+S ++ ++ + +DL LYDNEL + LY Sbjct: 183 AELIKYALRITTLNGIYTGIKFRRDFFKLSKKEQNKVHDWVYDLCDNLYDNELSHIKLLY 242 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 T D V+ ++ Y NKALMNLG EP +P + ++P + L +A DFF Sbjct: 243 QNTDLEDKVEHYIHYTLNKALMNLGQEPKYPENVETLDPILTTGLMESA-MIKDFF 297 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 157/297 (52%), Gaps = 2/297 (0%) Query: 2 KLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFT 61 K S NWN + D D W RL + P +VP+ D + L EQ + + F Sbjct: 9 KKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLLHSFG 68 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDA 120 L L TLQ + + DA E AV + + ++E+++ ++Y + + + D Sbjct: 69 SLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNEQRDE 128 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 A+ W+ +N LQ+K +++ Y+ D+ ++KK A VF+ + L++S F+ P+Y + KL Sbjct: 129 AFNWANQNPYLQKKMRLLNTVYQSDNAIQKKAAHVFISTGLYHSSFFGPLYLFGQHKLPR 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 TA+LI+ +R ++G Y G K++++ +S +++ + + +DL LY NEL + L Sbjct: 189 TAELIKYALRITTLNGIYTGIKFRRDFFNLSKEEQKNIHKWVYDLCDRLYANELNHIHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 Y +T D V+ ++ Y NKALMNLG EP +P + ++P + L +A DFF Sbjct: 249 YEDTGLEDKVEHYIHYTLNKALMNLGQEPKYPENVETLDPTLTTGLMESA-MIEDFF 304 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 20/327 (6%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + + N + + + ++ ++ NFW+P+++ ++ D+ + LT E+ + + L Sbjct: 35 NTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYL 94 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 T LD++Q P L P ++ E +H +SY + T+ T+ D Y Sbjct: 95 TFLDSVQTCN-IPHLKSSVTAPEISLCMAEQISQEGMHNQSYQYMIETIIPTEKRDKVYE 153 Query: 124 WSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + + L+ + + I Y+ ++ +A LE FY+GF +SR Sbjct: 154 FWRTDRVLKERCEYIAMLYQKYVDHPTQENYFIALMADYLLEGLYFYNGFIYFYNLASRM 213 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 + +AD+ ++I RDE H + M+ + +++ + + E ++ Sbjct: 214 LMPGSADIFKMINRDELSHVRLYQKLIPEAMQVFTHST-----DQIYEMFDKAVEFECRW 268 Query: 237 TDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI-LAALSPNADE 292 T+ + + + Y AN L +G +PL+ +P L S E Sbjct: 269 TNHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKE 328 Query: 293 NH---DFFSGSGSSYVMGKAVETEDED 316 H +FF + +SYVM V DE Sbjct: 329 AHTKANFFEATVTSYVMSSGVSGWDEI 355 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 121/319 (37%), Gaps = 24/319 (7%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ---TLTVVEQQLTMRVFTGLTLLDTLQN 71 E + +N W+P+++ +S DI W+ LT E+++ R D+L Sbjct: 89 KYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAA 148 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 P L +F EA+H +Y I +L + + A+ E + Sbjct: 149 NNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLG-LDEGEIFNAYHEVTSIR 207 Query: 132 QRKAQIIQQHYRGDDPLKKK--------------IASVFLESFLFYSGFWLPMYFSSRGK 177 + +I + DP K + + +E FY GF + + K Sbjct: 208 AKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNK 267 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 +T A+ + I+RDE++H + + + E ++ +L + + E +Y Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327 Query: 238 DELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 ++ A K++L + +N+ +G +PLFP E NP + + + Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEE---NPFPWMSEMIDLKKER 384 Query: 295 DFFSGSGSSYVMGKAVETE 313 +FF Y G A+ E Sbjct: 385 NFFETRVIEYQTGGALSWE 403 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 126/318 (39%), Gaps = 12/318 (3%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + ++N + + + + +NFW+PE++ L D+ ++ L E++ ++ + L Sbjct: 27 NTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLPAAERRAYDKILSFL 86 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 LD++Q+ P++ + L+ SF E VH++SYS + T+ + Sbjct: 87 VFLDSVQSAN-LPNVSAYITANEVDLCLTIQSFQECVHSQSYSYMLDTIASPDERQEIIF 145 Query: 124 WSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 +++ L + I Y ++ L+ IA+ LE FYSGF G Sbjct: 146 QWKDDEHLLARNTFIGDLYNEFQQEQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIG 205 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 ++ + IR I RDE H + + + E + +++ E E+ + Sbjct: 206 RMPGSVQEIRYINRDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAW 265 Query: 237 TDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-E 292 E ++ ++ Y N ++G L+ E + + N + Sbjct: 266 GKYAIGNEVEGLNEKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFI 325 Query: 293 NHDFFSGSGSSYVMGKAV 310 DF G ++Y A+ Sbjct: 326 KTDFIEGRSTAYAKSTAL 343 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 134/322 (41%), Gaps = 15/322 (4%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + + + + ++ + + NFW+PE+VPL +D + LT EQ R+ + + Sbjct: 28 NPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELTADEQWAYDRMLSFV 87 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 +D++ + P+L+ P LS +F EA+H++SY + ++ + Y Sbjct: 88 IFMDSILT-VSMPNLINYVTAPEINMCLSIHNFHEALHSKSYGYVLESVVPAERRQYIYD 146 Query: 124 WSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 E+ L + + I ++ + ++ +A LE FYSGF + G Sbjct: 147 LWREDRQLLERNRYIANTFQLFADNPTDEHFVRACMAQYVLEGIYFYSGFAFFYALARMG 206 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ TA I+ I RDE H ++ +L + ++ + ++E+ + Sbjct: 207 KMKGTATEIQFINRDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAW 266 Query: 237 TDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL-AALSPNADE 292 + + ++ ++ + A++ LG+EPL+ NP + S Sbjct: 267 AAYCVGNRIQGLSGEVLQGYVKHLADQRARALGFEPLYGNH---PNPIKWVESFSNLNQT 323 Query: 293 NHDFFSGSGSSYVMGKAVETED 314 DFF ++Y ++ +D Sbjct: 324 KADFFETRVTNYAKSTNIDLDD 345 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 135/321 (42%), Gaps = 12/321 (3%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + I N I + +++ + +NFW+PE++PL++D + L+ E++ +V + L Sbjct: 50 NTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLLSDDERRSYNKVLSFL 109 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 +D+L P++ P L+ +F EAVH++SY + ++ D Y Sbjct: 110 IFMDSLLTHN-LPNINEYITAPEVNLCLTVHAFQEAVHSQSYGYVLDSVVNPATRDQIYN 168 Query: 124 WSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + L R+ Q I + + +K +A+ LE FY+GF +G Sbjct: 169 EWRNDDHLLRRNQFITDLFEEFIENPTDRNLMKTIVANYILEGVYFYAGFGFFFVLGRQG 228 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ T I+ I RDE H Y + + + +++ +++ +E+ + Sbjct: 229 KMLGTVSEIKFIQRDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAW 288 Query: 237 TDELYAE--TPWADDVKA-FLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 + D + ++ Y AN L +L L+P P + + + N+ + Sbjct: 289 GQYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHK- 347 Query: 294 HDFFSGSGSSYVMGKAVETED 314 DFF ++Y + +D Sbjct: 348 TDFFEQRVTNYTKAGNLNWDD 368 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 8/308 (2%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 S + W+ WLPE+VPL++DI W+ LT E+ L ++F T D N Sbjct: 29 SYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIEVNNC 88 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + +LS S ME +H +YS + T+ + A+ + Sbjct: 89 YMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIGMPETEYQAFMKYKAMKDKYD 148 Query: 134 KAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 Q + + + F E ++ F + + F K+ +I +RDE Sbjct: 149 YMQRFNVDNKEEIATTLAVFGAFTEGVQLFASFAILLNFPRYNKMKGMGQIITWSVRDET 208 Query: 194 VHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA----ETPWADD 249 +H I ++ +++ E+LKS ++ + E + D + E A D Sbjct: 209 LHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLEARD 268 Query: 250 VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKA 309 VK ++ Y A++ L+ LG + + + E NP N E+ +FF + Y Sbjct: 269 VKKYIRYIADRRLLQLGLKENY---LIEQNPLTWLDQILNGVEHTNFFENRVTEYTRSAT 325 Query: 310 VETEDEDW 317 + DE + Sbjct: 326 TGSWDEVF 333 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 24/310 (7%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 ++ ++++++ +N W P ++ L DI ++ +T E+ + + + L N Sbjct: 18 VNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITFLMSYFNPNELLVNKA 77 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 A + P P L+ + EA H S+ + T D +AAY + + R Sbjct: 78 LAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETF--PIDREAAYNSHVDIPSMAR 135 Query: 134 KAQI--------------IQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKL 178 K + I D ++ +A +V LE FYSGF + + F R L Sbjct: 136 KEEFEVKFIKRMTEQTLDITTTEGKKDFVRNLVAYNVILEGIWFYSGFMVSLSFRQRNLL 195 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 N L+ I+RDE++H + +E+ Q EE + ++L+ + E QY Sbjct: 196 RNFGSLMDWIVRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNR 255 Query: 239 ELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 +L A+ + ++ Y A++ L LG+E AE NPA A + + + + Sbjct: 256 DLLPNGILGLNANYINQYVKYLADRRLEELGFE----AEYKVSNPAKWMATANDTLQLVN 311 Query: 296 FFSGSGSSYV 305 FF + +SY Sbjct: 312 FFESTNTSYE 321 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 24/311 (7%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 ++ +++N+ +N W P ++ L D+ + +T E + + + L N Sbjct: 16 VTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNKA 75 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 A + P L+ + EA H ++ + T D D AY + R Sbjct: 76 LAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF--PIDRDEAYRSHIHVPSMAR 133 Query: 134 KAQI--------------IQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKL 178 K I D ++ IA ++ LE FYSGF + + F R L Sbjct: 134 KEAFEVAFIKRMTEQTLDITTVEGKQDFVRNLIAYNIILEGIWFYSGFMVALSFRQRNLL 193 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 N LI ++RDE++H + +E+ +E + D++++ + E QY Sbjct: 194 RNFGSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNR 253 Query: 239 ELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 ++ AD V ++ Y A++ L LG+EP + VNPA A + + + + Sbjct: 254 DMLPRGILGMNADYVNDYVKYLADRRLEELGFEPEY----RVVNPAKWMATANDTLQVVN 309 Query: 296 FFSGSGSSYVM 306 FF + +SY + Sbjct: 310 FFEATNTSYEV 320 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 130/323 (40%), Gaps = 19/323 (5%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + S + NKI +W + +N W E+V +++D + L+ E+ R L Sbjct: 26 NPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQL 85 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 +D+LQ ++ P +P L ++ EA+H+ +Y+ + ++ + + + Y Sbjct: 86 IFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESI--SANTEEIYD 143 Query: 124 WSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + L+ K I Q Y ++ LK A+ LE FYSGF + G Sbjct: 144 MWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARSG 203 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ +A +IR I RDE H + + +L + ++ + + E + Sbjct: 204 KMLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASW 263 Query: 237 TDELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL-AALSPNADE 292 D + + ++ ++ + A+ L +G ++ +P + S ++ Sbjct: 264 GDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY----GVQHPIKWVESFSSFNEQ 319 Query: 293 NHDFFSGSGSSYVMGKAVETEDE 315 +FF S+Y G + D+ Sbjct: 320 RSNFFEARVSNYAKGSV--SFDD 340 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 132/325 (40%), Gaps = 19/325 (5%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + NKI + + +N W PE+V ++ D + LT+ E+Q R L Sbjct: 35 NPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELTLQEKQGYDRALAQL 94 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 +D+LQ ++ P P +L +F E++HA+SY+ + ++ + + D Y Sbjct: 95 IFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMVDSI--SANTDEIYQ 152 Query: 124 WSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 ++ L+ K I Y + +K A+ LE FYSGF + G Sbjct: 153 MWRKDDKLRSKNDYIADVYTDLAKNPTETNLIKAMFANQILEGIYFYSGFAFFYTLARSG 212 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ N+A++IR I RDE H ++ + L+ ++ + D E + Sbjct: 213 KMQNSAEMIRFIQRDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSW 272 Query: 237 TDELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN-ADE 292 + + A ++ ++ Y A+K L + +P NP N ++ Sbjct: 273 GEYITQGQILGLTAKIIRQYIEYLADKRLKAV----DYPILYNTQNPIQWVDEQVNFNNQ 328 Query: 293 NHDFFSGSGSSYVMGKAVETEDEDW 317 +FF +Y G+ ++D+ Sbjct: 329 RTNFFEAKVRNYTRGELK--FEDDF 351 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 119/324 (36%), Gaps = 24/324 (7%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTG 62 ++A+ +S + N W PE+VPL +D+ W L+ E++ Sbjct: 9 DPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERRAVEMFLGF 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 +++L SL P L+ ++ EA H ++ + TL D + + Sbjct: 69 FNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTL--PLDRERVF 126 Query: 123 AWSEENAPLQRKAQI---------IQQHYRGDDPLKKKI-----ASVFLESFLFYSGFWL 168 E+ + K + + L++ + V LE FYSGF L Sbjct: 127 GLHVEHPAVAAKELFQRQLAEQWLVTPDVESVEGLQRLVRNLVGYFVILEGIFFYSGFAL 186 Query: 169 PMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLE 228 + F R L ++ +++DE++H + + +E+ +L+L Sbjct: 187 ALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILR 246 Query: 229 LYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA 285 + E Y + E AD + ++ Y A++ L LG P E NP Sbjct: 247 AVELEEAYNRAVLPEPLIGLDADVLNRYVRYIADRRLEELGL----PIAFGEPNPLRWMV 302 Query: 286 LSPNADENHDFFSGSGSSYVMGKA 309 + E +FF Y +G+A Sbjct: 303 AQVDMPEIVNFFEARNIHYEVGRA 326 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 129/317 (40%), Gaps = 22/317 (6%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQN 71 I E + +N WLP ++P+ DI W++ L+ E+++ + + ++L Sbjct: 34 IKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVG 93 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAYAW-----S 125 ++ P L +F EAVH ++ I +L K++ AY + Sbjct: 94 NNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKA 153 Query: 126 EENAPLQRKAQIIQQHYRGD------DPLKKKIASVF-LESFLFYSGFWLPMYFSSRGKL 178 +++ ++ +++ ++R D + +K + +E FYSGF + + F + K+ Sbjct: 154 KDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKM 213 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 + + I+RDE +H + E+ EL+ +L+ D E++Y Sbjct: 214 IGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQ 273 Query: 239 ELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 + A ++ + A++ L +G +P++ NP + + + ++ + Sbjct: 274 DCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY----HTKNPFPWMSETIDLNKEKN 329 Query: 296 FFSGSGSSYVMGKAVET 312 FF Y ++ Sbjct: 330 FFETRVIEYQHAASLTW 346 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 13/315 (4%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NWN D+ ++ L +NFW P ++ + D W +LT +EQ +RV T L LD+ Sbjct: 38 LNWND-EDEIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDS 96 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 LQ ++ + + I+ EA H SYS I S+L + + + + ++ Sbjct: 97 LQVKAILE-VIRFTTNSALANISAFIAQQEATHTTSYSYITSSLVRLPVQNQYFNETMKH 155 Query: 129 APLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 L ++ +++ Y + + + S+ LE FYSGF + +S+ K+ + Sbjct: 156 PVLAKRNKLVLDVYEDFAENPSLQNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKS 215 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 + +I I RDE H Y+IG ++ + + +E + D L E E ++ E+ Sbjct: 216 STMISYIQRDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEIL 275 Query: 242 AETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHDFFS 298 A+ D + ++ Y ANK + LG + ++ E P I + D F Sbjct: 276 ADIEGLDLEEFDHYIEYLANKRVRQLGMDNIY-EERGNPMPWIQVFSDEMMEHTKTDQFE 334 Query: 299 GSGSSYVMGKAVETE 313 Y Sbjct: 335 NKSRDYSGATKKNNF 349 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 16/319 (5%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTL 69 W+ I + E+ + FW+P++V +S D W T + +EQ+L + L +LD++ Sbjct: 32 WDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWATEMNEMEQELFLNAIGILAVLDSI 91 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 + +A+++ ++ ME +H SY+ I S++ + ++N Sbjct: 92 ATYFDNVAAY-YIRDSAIKALMAFVAAMETIHNESYTYILSSVSSKAVSLDVFERPKKNE 150 Query: 130 PLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 + R+ +++ + + K +A LE F +GF +F+ GK+ T Sbjct: 151 FMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTG 210 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 +I+ I RDE H Y+ + + + EE F +D EL E ++ ++LY Sbjct: 211 TVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCEDLYK 270 Query: 243 ETPWAD--DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN-ADENHDFFSG 299 TP D +VK ++ Y AN L NLG + +F A+ P I A N + DFF Sbjct: 271 NTPDIDIEEVKEYIGYRANLILDNLGLDQIFSAK-KNPMPWITAFDPDNLNNTKRDFFED 329 Query: 300 SGSSYVMGKAVETEDEDWN 318 +Y GKA E ++ DW+ Sbjct: 330 KEVNY--GKANEQKN-DWD 345 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 120/321 (37%), Gaps = 21/321 (6%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTL--TVVEQQLTMRVFTGLTLLDT 68 +N E W + W+ E+VPL D+ W + + E+ L ++F T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 + MP + +++ + ME +H +Y+ + +TL + +A+ + Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLGMPRTEFSAF---RDY 142 Query: 129 APLQRKAQIIQQHYRG---DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLI 185 A ++ KA + G D + F E ++ F + + F K+ ++ Sbjct: 143 AAMRDKADYMHTFGVGTMADVSRTLAMFGAFTEGMALFASFAMLLNFPRHNKMKGMGQIV 202 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA--- 242 +RDE++H I + + + + ++ D+ + E ++ D + Sbjct: 203 TWSVRDESLHCQGIIRLFHEWNRETGALTKP-VRDDILDVATTMVGLEEKFVDLAFELGA 261 Query: 243 -ETPWADDVKAFLCYNANKALMNLGYEPLFPA--------EMAEVNPAILAALSPNADEN 293 E A+D+K+++ Y A+ L L L+ E +P N E+ Sbjct: 262 IEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEILNGVEH 321 Query: 294 HDFFSGSGSSYVMGKAVETED 314 +FF + Y D Sbjct: 322 ANFFEQRSTEYSKAATQGAWD 342 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 120/320 (37%), Gaps = 26/320 (8%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDTLQN 71 I D E + + +N W PE+V + DI WQ LT E+QL + ++L Sbjct: 18 IDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLTA 77 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 ++ P L ++ EAVH ++ +L D + Y + + Sbjct: 78 NNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLG--FDPEHMYGMYDRIPSI 135 Query: 132 QRKAQIIQQHYRGDDPLKKKIAS---------------VFLESFLFYSGFWLPMYFSSRG 176 K + + R D I + V +E FY+GF + + RG Sbjct: 136 AEKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFYVIMEGIFFYAGFAMMLALKRRG 195 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ + I+RDE++H + + ++ + ++ L+ + D E Y Sbjct: 196 KMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLY 255 Query: 237 TDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 + + ++ ++ Y A++ L +P++ + NP + + Sbjct: 256 ARDACPDDLLGMSSEQFADYVEYVADRRFQQLRMDPVYGTD----NPFPWMTEQVDLNTE 311 Query: 294 HDFFSGSGSSYVMGKAVETE 313 +FF + S Y G +++ + Sbjct: 312 TNFFERNVSEYQQGGSLDWD 331 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 4/213 (1%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRGDDPLK----KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQR 215 ++I LI+RDE++HG YIG Q+ + R Sbjct: 190 EIISLILRDESLHGKYIGLLAQEIYDSFVKWIR 222 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 18/327 (5%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 + + IN + ++ + +N W+P+ L+ DI + T+ ++ + + L Sbjct: 26 NPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNYVTMPPNMRRAFDGMLSYL 85 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA 123 T LD+LQ + P LMP P + E VH++SY+ I T+ T D Y Sbjct: 86 TFLDSLQTRV-LPLLMPVITAPEVSICMGEQLSQEQVHSQSYAYIIETVIPTDKRDYIYE 144 Query: 124 WSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 E+ L ++ + IQ Y ++ ++ LE F+ GF L ++ Sbjct: 145 LWREDPVLLKRCEYIQNLYDRYIHEMTMENYTISMVSDFLLEGIYFFPGFRLFYAIANER 204 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 ++ TAD+I+LI RDE H I + + + +L DL + + E+++ Sbjct: 205 YMSATADIIKLIERDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIEW 261 Query: 237 TDELYAETPWADD--VKAFLCYNANKALMNLGYEPLFPAEMAEVNPA-----ILAALSPN 289 + + ++ + Y N +G +F NP A + Sbjct: 262 GLHIGLGVNGINATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGED 321 Query: 290 ADENHDFFSGSGSSYVMGKAVETEDED 316 + +FF K V+ D Sbjct: 322 SITRDNFFESGVIYRNPAKVVDGWDSI 348 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 9/237 (3%) Query: 91 LSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKK 150 + I FME VHA+SYSS+FSTL ++D+D A+AW E N Q K + + Y D + Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 151 KI---------ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGY 201 ++ +SV LESFLFY+GF+LP++F+S+GKLTNTADLIRLI+RDE VHGYY+GY Sbjct: 61 RVEYYGAIIRASSVLLESFLFYTGFYLPLHFASQGKLTNTADLIRLIMRDEGVHGYYLGY 120 Query: 202 KYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKA 261 K+QK ME +R+ +K +L L+ NE+ +E+Y + V+ FL YN NKA Sbjct: 121 KFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIYEPLGLSAQVQTFLRYNLNKA 180 Query: 262 LMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 + NLG E +FPAEM V P IL+ LS +++E HDFFSGSGSSYV+G+A ET D+DW+ Sbjct: 181 MQNLGLENVFPAEMTRVEPRILSQLSVDSEETHDFFSGSGSSYVIGQAEETTDDDWS 237 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 123/322 (38%), Gaps = 24/322 (7%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + + N W E+V L +D+ L+ E+ L R+ DT+ Sbjct: 34 RYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLVAFFATGDTIVANNL 93 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK-DVDAAYAWSEENAPLQR 133 +L +P LS F EAVH + Y ++ T + + AA+A E + R Sbjct: 94 VLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVENIPSIAR 153 Query: 134 KAQII--------------QQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 KA+ Q R L + +E FY F + SRG L Sbjct: 154 KAEFCFRWIDSIFELRELRTQADRRAFLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLN 213 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 A + RDE++H + + +L+ +++ E D E+Q+ ++ Sbjct: 214 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAED 273 Query: 240 LYAETPWA---DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 L + D++ +L + A++ L+ LG P++ NP L + E +F Sbjct: 274 LLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMY----GSANPFAFMELQ-DVQELSNF 328 Query: 297 FSGSGSSYVMG-KAVETEDEDW 317 F S+Y MG T D+D+ Sbjct: 329 FERRVSAYQMGVSGSVTFDDDF 350 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 123/346 (35%), Gaps = 46/346 (13%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + W++ + WLP +VP+ +D+ W+ L ++ +F T D Sbjct: 15 YPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVASAY 74 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK 134 +P P ++ + E VH +YS + TL + + EE ++ K Sbjct: 75 YTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLGMPEATYKEFLMYEE---MKDK 131 Query: 135 AQIIQQHYRGDDPL-----------KKKIA------SVFLESFLFYSGFWLPMYFSSRGK 177 I++ L K+ IA S F E +S F + + F G Sbjct: 132 QDYIKKFSDSRHILGKGEENLTTEDKEHIAAGIALFSGFTEGMQLFSTFAMLLIFPLNGF 191 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE----LKSFAFDLLLELYDNE 233 + ++ I DE H + ++ +E+ G + L+ + + E+ E Sbjct: 192 MKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLE 251 Query: 234 LQYTDELYAE---------------------TPWADDVKAFLCYNANKALMNLGYEPLFP 272 + D ++ + +KA++ Y A++ L +GY+ +F Sbjct: 252 EAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFN 311 Query: 273 AEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 E NP + NA + +FF + Y T E WN Sbjct: 312 LEPYPTNPLPELEIMINAPTHTNFFENRSTDYANVSTKGTWSEIWN 357 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 112/309 (36%), Gaps = 18/309 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I D ++ + ++FW +++ LS D+ W L E+ V D + Sbjct: 99 IEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGADGIVVE 158 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 A + P A ME +H +Y + + + KD + +A + + Sbjct: 159 NLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPSV 218 Query: 132 QRKAQIIQQHYRGD-DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 ++KA+ Q++ D ++ +A +E F F + RG + LI R Sbjct: 219 EKKARWAQRYIGSDASFAERLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISR 278 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW---A 247 DE +H + Y K K+S + L+ E + E + + A Sbjct: 279 DEGLHCSFACQLYSKLERKLSE-------TDMHKLIGEAVEVEKGFVCDALPVGLIGMNA 331 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 + ++ + A++ L +LGY L+ NP + + +FF Y Sbjct: 332 SLMSQYVEFVADRLLHDLGYRTLY----GSKNPFDWMD-MISLEGKTNFFEKRVGEYQKS 386 Query: 308 KAVETEDED 316 + + +D Sbjct: 387 GVMASLSDD 395 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 107/306 (34%), Gaps = 17/306 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I E + + ++FW E+V + D+ W L EQ+ V D + Sbjct: 182 IKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIKYVLAFFAASDGIVMEN 241 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS-TLCQTKDVDAAYAWSEENAPLQ 132 A M D P A ME VH+ YS + + + ++ + + + Sbjct: 242 LAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPEERNQLFDAIHTIPTVA 301 Query: 133 RKAQIIQQHYRGDD-PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 +KA+ + + ++ + +E F F + R + + LI RD Sbjct: 302 KKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRD 361 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWAD 248 E +H + Y ++S + ++ E E ++ E + AD Sbjct: 362 EGLHCDFACCLYSHLKNRLS-------RERVLQIVDEAVQLEDEFCTEALSCELLGMNAD 414 Query: 249 DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGK 308 ++ ++ + A++ L++LGYE + NP + +FF Y Sbjct: 415 LMRQYIRFVADRLLVSLGYEKHYNTR----NPFDWME-MISLQGKANFFERRVGEYQRAG 469 Query: 309 AVETED 314 + + Sbjct: 470 VMGGNN 475 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 76/350 (21%), Positives = 132/350 (37%), Gaps = 43/350 (12%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 ++ +++ D ++ + S FW PE+V +S D +Q L E+ + + TL Sbjct: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LD++Q +L+P P E + +F E +H+RSY+ I + D + Sbjct: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFDDI 141 Query: 126 EENAPLQRKAQIIQQHY--------------RGDDPLKKKIASV---------------- 155 N +Q++A+ I +Y G + K +V Sbjct: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 Query: 156 -FLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQ 214 LE+ FY F F+ R + A +IRLI RDEA+H + + Sbjct: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 Query: 215 ----REELKSFAFDLLLELYDNELQYTDELYAETPWADDVKA----FLCYNANKALMNLG 266 EE K +DL ++ E + D L+ + K ++ Y N + +G Sbjct: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 Query: 267 YEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDED 316 + F + P I L + + SSY++G+ D D Sbjct: 322 LDLPFQTRSNPI-PWINTWLVSDNVQVAP-QEVEVSSYLVGQIDSEVDTD 369 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 123/304 (40%), Gaps = 13/304 (4%) Query: 18 KDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPS 77 + +R+ +N W P V +++D+ ++ L ++ + + L+ LD +Q + Sbjct: 10 WAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFNNINQN 69 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 + +P LS ++ EA+H +SY++I T+ + D + Y E + L +K Q Sbjct: 70 IAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETV--SLDPMSVYMTFERDGLLAQKNQF 127 Query: 138 IQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 I + R + +++V LE F+SGF + +G++ +AD+IR I R Sbjct: 128 ILKQSRLLGEKFSAEGFALSCVSNVLLEGVYFFSGFLSFYLLADKGEMLGSADMIRYIQR 187 Query: 191 D-EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 D E H + + + + A ++ L + E+ + + Sbjct: 188 DEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWGKYITKGVTNPKA 247 Query: 250 VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL-AALSPNADENHDFFSGSGSSYVMGK 308 ++ ++ + AN + + F NP S +FF + Y +G Sbjct: 248 IEDYIKHLANLRAEQI--QAPFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKVGG 305 Query: 309 AVET 312 A+ Sbjct: 306 ALVW 309 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 117/323 (36%), Gaps = 25/323 (7%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVI 73 + E++ N W E++ L +D+ L+ E+ L R+ DT+ Sbjct: 48 RYPQFYEMFRDAIKNTWTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVANN 107 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQ 132 +L +P LS F EAVH + Y ++ T + A+A E ++ Sbjct: 108 LVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPSIR 167 Query: 133 RKAQIIQQHY--------------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL 178 KA+ R L +E FY F + SRG L Sbjct: 168 TKAEFCFTWIDSIENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLL 227 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 A + RDE++H + + + E+ +L+E D E Q+ + Sbjct: 228 NGLASGTNWVFRDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAE 287 Query: 239 ELYAETP---WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 +L D++A+L A++ + LG ++ NP L + E + Sbjct: 288 DLLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIY----GTKNPLAFMELQ-DVQELSN 342 Query: 296 FFSGSGSSYVMGK-AVETEDEDW 317 FF S+Y +G + DED+ Sbjct: 343 FFERRVSAYQVGVEGSVSFDEDF 365 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 134/355 (37%), Gaps = 48/355 (13%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 ++ +++ + ++ + S FW PE+V +S D + L E+ + + TL Sbjct: 24 VNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYAALPEHEKHIFISNLKYQTL 83 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LD++Q +L+P P E + +F E +H+RSY+ I + D + Sbjct: 84 LDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVN--DPSIVFDDI 141 Query: 126 EENAPLQRKAQIIQQHYRGDDPLKK---------------------------------KI 152 N + ++AQ I +Y DD ++ + Sbjct: 142 VTNEEIIKRAQDISSYY--DDLIRDSQLYGLYGEGTYTVDGKECVVTLRSLKKQLYLCLM 199 Query: 153 ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISL 212 + LE+ FY F F+ R + A +I+ I RDEA+H + Sbjct: 200 SVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDD 259 Query: 213 GQ----REELKSFAFDLLLELYDNELQYTDELYAETPWA----DDVKAFLCYNANKALMN 264 + EE K A+DL + + E + D L+ + D + ++ Y N + Sbjct: 260 PEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQA 319 Query: 265 LGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETED-EDWN 318 +G F + P I A L + + SSY++G+ D D++ Sbjct: 320 VGLPLPFQTRSNPI-PWINAWLVSDNVQVAP-QEVEVSSYLVGQIDSKVDTNDFD 372 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 7/297 (2%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 AINWN + D+ D VW R TS FWL ++P+ ND W L + EQ + LT Sbjct: 7 YYRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLT 66 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW 124 L T Q++ + + E A+L+NI F+E V+ ++Y+ I T + +++ ++ W Sbjct: 67 NLSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEW 126 Query: 125 SEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 + ++ + I YR +KK+ ++ +E L Y+ + N + Sbjct: 127 VDNDSRVLEYLNDINTVYRESSLIKKRFIALCVEGLLNYAYLSHLFELWINKEFNNLGTM 186 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET 244 + +IIR+E++H +Y +K + +++ + E K+++++ + L D+ Y Sbjct: 187 LEMIIRNESLHCFYFSHKVKLLLKESDPKEVERFKAWSYETVNHFVKLGLNIIDDFYYLK 246 Query: 245 PWADDVKAFLCYNANKALMNLGYEPLF-------PAEMAEVNPAILAALSPNADENH 294 K + AN LM +G + F +N LS +++++ Sbjct: 247 ESKKIAKNLILQEANNILMGIGLKEQFGFNDEVLKGINYRLNNLRRHYLSISSNKST 303 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 118/315 (37%), Gaps = 22/315 (6%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQNV 72 S +++ + W+ +++ LS D+ W+ +T VE++ + T D Sbjct: 104 SYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAVGQ 163 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQ 132 +P +L + + E +H R+Y+ + TL A+ E + Sbjct: 164 NYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSEYHAFL---EYKAMT 220 Query: 133 RKAQIIQQHYRGDDPLKKKIASVFL------ESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 K + +P ++ + L E ++ F + + F GK+ ++ Sbjct: 221 DKIDFMMDA----NPNTRRGLGLCLAKTVFNEGVALFASFAMLLNFQRFGKMKGMGKVVE 276 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---- 242 IRDE++H ++ ++ + K + + + + E ++ D Y Sbjct: 277 WSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTI 336 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E AD+VK ++ + ++ L LG ++ + NP N ++ +FF + Sbjct: 337 EGLKADEVKEYIRHITDRRLNQLGLNEIYNIDK---NPLTWLEWILNGADHTNFFENRVT 393 Query: 303 SYVMGKAVETEDEDW 317 Y + DE + Sbjct: 394 EYEVAGLTGNWDEAY 408 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 114/330 (34%), Gaps = 26/330 (7%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ---TLTVVEQQLTMRVFTGLT 64 N + +++ + +N W PE +P+ DI W+ +T E+ + + Sbjct: 36 TFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFS 95 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAYA 123 + + P + VL + E +HA S + S+L + +A + Sbjct: 96 AAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMF- 154 Query: 124 WSEENAPLQRKAQIIQQHYR------------GDDPLKKKIASV--FLESFLFYSGFWLP 169 E+ + RK + + ++ R L + + +E FY F + Sbjct: 155 --EDIPTIVRKNEFVVKNSRQLRRDLDLTQPENKQLLARNMFLFGQCMEGTQFYGLFGMI 212 Query: 170 MYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLEL 229 + + K + R +RDE+ H +E+ K + + E Sbjct: 213 LSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREA 272 Query: 230 YDNELQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAAL 286 E ++ + D+ ++ Y A++ L +G P+ + NP A Sbjct: 273 VTLEKEFIRDCLPVNAVGLAVDEFLTYIDYIADRRLEGVGLAPI--SATPIKNPLPWLAE 330 Query: 287 SPNADENHDFFSGSGSSYVMGKAVETEDED 316 + + +FF G + Y ++ +D Sbjct: 331 MMDIKKEQNFFEGRVTEYQKASSLAVTHDD 360 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 8/206 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 +K + + N N + +++ + +NFW+PEKV L+ D ++ LTV E++ + Sbjct: 25 IKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYENLTVPEREAYDGIL 84 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L LD++Q P++ P +L+ +F EA+H++SY I ++ + D Sbjct: 85 SFLIFLDSIQTNN-IPNISDHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESILPKQSRDL 143 Query: 121 AYAWSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 Y ++ L + I + Y+ ++ K IA+ LES FY+GF + Sbjct: 144 IYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVIIANYLLESLYFYNGFNFFYLLA 203 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYI 199 SR K+ T+D+IRLI RDE H Sbjct: 204 SRNKMVGTSDIIRLINRDELSHVVLF 229 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 114/311 (36%), Gaps = 19/311 (6%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I +++ + ++FW E+V LS D+P W L E+ + D + N Sbjct: 47 IQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNEN 106 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQ 132 + P +E VH+ YS + T K + + E ++ Sbjct: 107 LVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVK 166 Query: 133 RKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 +KA + R ++ +A +E F F + RG + LI R Sbjct: 167 KKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISR 226 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD- 249 DE +H + +Q + K S + +++++ E ++ E + Sbjct: 227 DEGLHCDFACLMFQYLVNKPSEER-------VREIIVDAVKIEQEFLTEALPVGLIGMNC 279 Query: 250 --VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM- 306 +K ++ + A++ L+ LG+ +F AE NP + + + +FF S Y Sbjct: 280 ILMKQYIEFVADRLLVELGFSKVFQAE----NPFDFME-NISLEGKTNFFEKRVSEYQRF 334 Query: 307 GKAVETEDEDW 317 ET D + Sbjct: 335 AVMAETTDNVF 345 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 104/302 (34%), Gaps = 34/302 (11%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I + + R ++FW E++ LS+D+ W LT E+ R+ D + N Sbjct: 48 IQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFLSRILAFFASSDGIVNEN 107 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQ 132 + P +E VH+ +YS + T + ++ D + E +Q Sbjct: 108 LVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDPEERDFLFRAIETIPSIQ 167 Query: 133 RKAQII--QQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 RKA+ + ++ +A +E F F + RG L LI R Sbjct: 168 RKAEWALTWTSDKSTTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISR 227 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDV 250 DE +H + + ++ ++ E + E ++ Sbjct: 228 DEGMHTDFACLLFAYLRKRPHSDT-------ILAIVTEAVEIEKEF-------------- 266 Query: 251 KAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAV 310 ++A++ L +LG + + + NP L + + +FF S Y Sbjct: 267 -----FSADRLLTSLGNDKHYHVD----NPFDFMEL-ISMEGKANFFEKRVSDYAKANVS 316 Query: 311 ET 312 T Sbjct: 317 PT 318 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 117/314 (37%), Gaps = 26/314 (8%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 E++ + W PE++ + D+ +++LT E+ L + L Sbjct: 21 NPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELLVQN 80 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQ 132 + P P+ + S FME +H+ + I +T D Y + E+ L Sbjct: 81 VLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEM--DRKRIYNITLEDKLLM 138 Query: 133 RKAQIIQQH-----YRGDDP----LKKKIASVFL------ESFLFYSGFWLPMYFSSRGK 177 K ++I + Y DP KK+I + L E FYS F GK Sbjct: 139 EKQELIIRAVDRITYGKADPDTLEGKKQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGK 198 Query: 178 LTNTADLIRLIIRDEAVHGY-YIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 + N + LI+ DE++H I E + E+ + +++ + EL Y Sbjct: 199 MKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNY 258 Query: 237 TDELYAE----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 + +++ ++ Y A++ L LG++P F + NP + + Sbjct: 259 LKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQF---KIDQNPLKFLQ-KEDVKK 314 Query: 293 NHDFFSGSGSSYVM 306 +FF S + Y Sbjct: 315 LTNFFEVSSTEYTN 328 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 113/309 (36%), Gaps = 18/309 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I +++ + ++FW E+V LS DI W++L E+ V D + N Sbjct: 85 IEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNEN 144 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQ 132 + ME +H+ YS + T + K+ + + E ++ Sbjct: 145 LVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVK 204 Query: 133 RKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 +KA + + ++ +A +E F F + RG + LI R Sbjct: 205 KKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 264 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD- 249 DE +H + ++ + K S + ++++ E ++ E + Sbjct: 265 DEGLHCDFACLMFKHLVHKPSEER-------VREIIINAVRIEQEFLTEALPVKLIGMNC 317 Query: 250 --VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 +K ++ + A++ ++ LG+ +F E NP + + + +FF Y Sbjct: 318 TLMKQYIEFVADRLMLELGFSKVFRVE----NPFDFME-NISLEGKTNFFEKRVGEYQRM 372 Query: 308 KAVETEDED 316 + + E+ Sbjct: 373 GVMSSPTEN 381 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 13/309 (4%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQNV 72 ++ + W+ ++ L +D+ W++ +T E+ V T LD Sbjct: 77 RYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDVEVGA 136 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQ 132 + L +L++ + EA+H ++YS + TL A+A + + Sbjct: 137 LYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYQAFA---DYVEMT 193 Query: 133 RKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 K +++ + + +V E ++ F + + F GK+ ++ +R Sbjct: 194 DKLDFMREMDCSTLPGLARSLLRAVLNEGVSLFAAFVMLLTFQRSGKMKGMGKVVEWSVR 253 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWA--- 247 DE +H + ++ + +++ + + + E + D + E Sbjct: 254 DENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAFQECGPVCEL 313 Query: 248 --DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 VK ++ Y N N+G P E P + + +FF + Y Sbjct: 314 EPKQVKDYVLYVINLRAANMGL-PKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEYE 372 Query: 306 MGKAVETED 314 G + Sbjct: 373 TGGLTGSWS 381 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 134/352 (38%), Gaps = 44/352 (12%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 ++ +++ + ++ + S FW PE+V LS D +Q L E+ + + TL Sbjct: 24 VNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDYIDFQNLPQHEKHIFVSNLKYQTL 83 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LD++Q +L+P P E + SF E +H+RSY+ I + T + Sbjct: 84 LDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINT--PSLIFDDI 141 Query: 126 EENAPLQRKAQIIQQHYRGD--------------------------DPLKKKIASVF--- 156 +N + +A+ I ++Y LKKK+ Sbjct: 142 IDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTINGKKIKIDLHELKKKLYLCLISV 201 Query: 157 --LESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNM----EKI 210 LE+ FY F F+ R K+ A +IRLI RDEA+H + + Sbjct: 202 NALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEALHLTSTQHILNILHNDKNNEG 261 Query: 211 SLGQREELKSFAFDLLLELYDNELQYTDELYAETPWA----DDVKAFLCYNANKALMNLG 266 +E + L + + D E + L+ + + ++ Y N + +G Sbjct: 262 MSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGLNQEILSQYIEYITNIRMKAIG 321 Query: 267 YEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAV-ETEDEDW 317 F + P I + L + + S SSY++G+ E D D+ Sbjct: 322 LPSPFKILSNPI-PWINSWLISDNVQVAP-QEISVSSYLIGQINSEINDSDF 371 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 128/346 (36%), Gaps = 32/346 (9%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + R + W + + + S FW PE+V ++ D + TLT E+++ Sbjct: 26 VSIQRYDIVAW-----PFVQKWYEKGLSQFWRPEEVDITKDKADYATLTPAEKRIYESNL 80 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST--------- 111 T+LD++Q + P A TP + + + EA+H+ SY+ I Sbjct: 81 KRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSLSYTHILRNTVNDPGIVF 140 Query: 112 ---LCQTKDVDAAYAWSEENAPLQRK--AQIIQQHYRGDD-------PLKKKIASVFLES 159 L + VD A+ S + R ++ + + +D + A+ LE Sbjct: 141 DHVLDVAEIVDCAHQISTHYDDMVRYSGMRMAGRAFTREDIMNAKRAFWRALFAANTLEG 200 Query: 160 FLFYSGFWLPMYFSS-RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKN--MEKISLGQRE 216 FY F F+ + K+ A +IR I RDE H + M+ RE Sbjct: 201 IRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQDHLILTQTLLNRLPGMDPDFEIIRE 260 Query: 217 ELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMN-LG-YEPLFPAE 274 EL+ + L++ + E Q+ D L+ + L + + L + +G +P E Sbjct: 261 ELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGLNAKILHHMVDWLLTHRMGAIGHPYPGE 320 Query: 275 MAEVNPAIL-AALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF 319 + P N + Y+MG + + F Sbjct: 321 PRKECPVPWINEWLNNKTMQYALQEAEAPDYLMGVLTGSVSDGLKF 366 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 109/318 (34%), Gaps = 29/318 (9%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 E + N W P + +S D+ + LT+ E+ + V LT D L Sbjct: 97 KYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHVYENVLAYLTTSDILAMRN 156 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 ++M P + + + E++H +Y T+ D Y + R Sbjct: 157 IGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIG--LDQSEIYNRYRVTPAIYR 214 Query: 134 KAQI----IQQHYRGDDPLKKK-----------IASVFLESFLFYSGFWLPMYFSSRGKL 178 K ++ I R D L+ + + E FY+GF RG + Sbjct: 215 KIKMGNERISALLRPDINLRNRDDLETFVMAYIFFAGIFEGCWFYNGFSPIFALQRRGLM 274 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 T + ++ I+RDE +H + ++ +++ + + L E E Y Sbjct: 275 KGTGEQLQYIMRDEVMHCAFGIRVVKQIIKEEGVTLDPKA---IKTLWEEAEAAETGYAH 331 Query: 239 ELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 L E D ++ F + AN+ L + FP N + + Sbjct: 332 FLLKEPILGYTAEDHIEQF-RFIANRRAKQLKLDEPFPGAG---NALPWLDEQASMRKEK 387 Query: 295 DFFSGSGSSYVMGKAVET 312 +FF + Y G +++ Sbjct: 388 NFFETRVTEYQTGASLQW 405 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 111/305 (36%), Gaps = 18/305 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNV 72 I ++ + + ++FW E++ +D+ W +T E+ +R+ D + Sbjct: 115 IKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGE 174 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 + A S S +E VH+ +YS + T ++ D + + Sbjct: 175 NIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIPCI 234 Query: 132 QRKAQIIQQHYRGDDPLK-KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 ++KA ++ + P + + +A +E F F + RG + LI R Sbjct: 235 KQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISR 294 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWA 247 DE +H + Y + S + ++ E E Q+ + A Sbjct: 295 DEGMHTDFACLLYNHLKHRCSTDE-------VHHIVSEALVIEKQFLTDALPCALIGINA 347 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 + ++ + A++ +++LGY ++ A NP L + +FF S+Y Sbjct: 348 HLMCQYMEFVADRLVVDLGYPKIYNAT----NPFDWMEL-ISLQGKANFFESRVSAYQKA 402 Query: 308 KAVET 312 T Sbjct: 403 NVSRT 407 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 115/321 (35%), Gaps = 29/321 (9%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + + R ++FW E++ LS DI W + E+ RV D + N Sbjct: 91 IKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAFFAASDGIVNE 150 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + + P ++ +E +H+ +YS + T + K+ + + + Sbjct: 151 NLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEI 210 Query: 132 QRKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 KA+ + + D L ++ +A +E F F + RG + LI Sbjct: 211 GEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELIC 270 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPW 246 RDE +H + + K E+ ++ E + E +Y + Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK-------IVTEAVEIEQRYFLDALPVALLGMN 323 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 AD + ++ + A++ L+ G + + E NP + + +FF S Y Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKVE----NPFDFME-NISLAGKTNFFEKRVSDYQK 378 Query: 307 GKAVE----------TEDEDW 317 + T +ED+ Sbjct: 379 AGVMSKSTKQEAGAFTFNEDF 399 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 117/312 (37%), Gaps = 16/312 (5%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 + ++ +S FW +++ + DI + +T E + TL + + Sbjct: 14 DYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGRD 73 Query: 74 G-APSLMPDALTPHEEAVLSNISFME-AVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 ++ P E + + F E VHA Y+ I L + D Y + L Sbjct: 74 YWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALM--LNTDEFYLAYVNDPIL 131 Query: 132 QRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYF--SSRGKLTNTADLIRLII 189 + + + + DDPL A +E + YS F +F + KL N I + Sbjct: 132 KERMEFVDSLVEEDDPLYSLGAFSMVEGAVLYSSFAFLKHFQAKGKNKLMNVVRGINFSV 191 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDL---LLELYDNELQYTDELYA---- 242 RDE +H + Y ++I + +DL + ++E + D ++ Sbjct: 192 RDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKGEM 251 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E A+ +K F+ N L LG EP+F V + N HDFFSG G+ Sbjct: 252 EGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVAEWFYDGI--NGVMFHDFFSGIGN 309 Query: 303 SYVMGKAVETED 314 SY + + Sbjct: 310 SYNRSWDEKGFN 321 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 113/322 (35%), Gaps = 24/322 (7%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQN 71 + + ++ ++ +N W P+ + ++ D W T L+ E+ + + + + Sbjct: 71 LKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWIIEMGVGYFSAAEGIVG 130 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 + + + E++H S I +L D+D A + + Sbjct: 131 DSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLN--IDLDEVTAKFSDIPSV 188 Query: 132 QRKAQIIQQH--------YRGDDPLKKKIASVF------LESFLFYSGFWLPMYFSSRGK 177 QRK I +H K+K A +E FY+ F + + + K Sbjct: 189 QRKNAFITRHMPELKMGIDLTQTANKQKFAKAIFGITQVMEGTQFYALFAMILSLHRQNK 248 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 +T + + +RDE+ H Y + + + E ++ + + E + E ++ Sbjct: 249 MTGIGQMFQYTLRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFV 308 Query: 238 DELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 + E D ++ YNA++ L L L + NP + Sbjct: 309 RDCLPEDGVGMTQADFLTYVEYNADRRLAGLDLPAL---SGVKTNPFAWLDEVIFLRKEK 365 Query: 295 DFFSGSGSSYVMGKAVETEDED 316 +FF + Y +++ ED Sbjct: 366 NFFETRVTEYQTSGSLKNTAED 387 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 115/325 (35%), Gaps = 33/325 (10%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVI 73 + W+ W +++ + +D+ W L+ E+ +++ T D + Sbjct: 57 EYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVDVA-V 115 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 G + P +L + EA+H SYS + STL + + ++ Sbjct: 116 GYVQYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNLPDVTYQEFL---KYKAMKD 172 Query: 134 KAQII--------------------QQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 K + + + + +K + S F+E +S F + + F+ Sbjct: 173 KHEFVFNSRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGVQLFSSFIMLLNFT 232 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQR-EELKSFAFDLLLELYDN 232 G + +I+ I DE H + + + + R L++ D ++ Sbjct: 233 RHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQL 292 Query: 233 ELQYTDELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSP 288 E + D ++ ADDVK+++ Y N+ L +GY PL+ NP Sbjct: 293 EDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVE---NPLPWVEDLL 349 Query: 289 NADENHDFFSGSGSSYVMGKAVETE 313 NA + +FF + Y Sbjct: 350 NAPSHTNFFENKPTEYAKASLTGDW 374 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 106/322 (32%), Gaps = 26/322 (8%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQN 71 + E + NFW+P ++P+ D W T LT E L + LT D L Sbjct: 58 VKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLVP 117 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAYAWSEENAP 130 +++ + E+ H SY I + K + +E Sbjct: 118 DNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDEKGQGQIFNLYQEVPA 177 Query: 131 LQRKAQ----IIQQHYRGDDP----------LKKKIASVFLESFLFYSGFWLPMYFSSRG 176 L K + P L+ I+ E F GF + +G Sbjct: 178 LTEKLNWNLTFTNNVVNSEAPRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARKG 237 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 KL NTA I RDE +H + ++ +++ ++ + ++ E E Y Sbjct: 238 KLRNTAQQYSYIWRDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDY 297 Query: 237 TDELYAETPWADD-VKAFLC---YNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 E VK ++ + A+ NLG +PLF P I + Sbjct: 298 AHASMPEGGIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHP-MPWISEY---ELNH 353 Query: 293 NHDFFSGSGSSYVMGKAVETED 314 +FF G Y G + T D Sbjct: 354 EVNFFEGRVREYQTGSQL-TWD 374 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 4/253 (1%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 M AINW++ D D W +LT+NFWL +VP+++D P+W LT +Q Sbjct: 1 MDYLYYKAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHAL 60 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 G LL Q+ +GAPSL T EEAVL+ I+FME+VH ++ ++IF L + A Sbjct: 61 AGRALLSAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTDEETTAA 120 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 YAW++ APLQ + + GDD +++ + + + +GF ++ L Sbjct: 121 YYAWADGQAPLQAALTDLTKGIEGDDLMRRGL--FLIADTVLCAGF--DWAVLTQPALAQ 176 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 T +++ I+ + Y+ YK+++ + ++ ++E L + L Q + L Sbjct: 177 TNQMLKNILTGNLIFRDYLAYKFRQGIAELPFAKQEALVAQLTKGAQSLIKLAHQQNEAL 236 Query: 241 YAETPWADDVKAF 253 + A+D+ F Sbjct: 237 LEDAGAANDLVDF 249 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 15/247 (6%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRL-TSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMR 58 +K + + N+I +++ + +NFW+PE++ + D ++T L+ E++ Sbjct: 29 IKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDYEKRAYEL 88 Query: 59 VFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV 118 V + L LD+ Q + P E ++ F E+VHA SY I ++ Sbjct: 89 VLSFLIALDSFQVDM-LKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILESVVDPVKA 147 Query: 119 DAAYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMY 171 D Y + E+ L + ++I + Y ++ +K I + LES FYSGF Sbjct: 148 DEIYNYWREDERLLERNKVIAELYNEFIRKPNEENFIKATIGNYILESLYFYSGFAFFYT 207 Query: 172 FSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYD 231 +GK+ NT I+ I RDE ++ + ++L + ++ Sbjct: 208 LGRQGKMRNTVQQIKYINRDELCFIEGTEVLTKRGFVDFRELREDDLVAQ-----YDIET 262 Query: 232 NELQYTD 238 E+ +T Sbjct: 263 GEISWTK 269 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 193 AVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA-ETPWADDV- 250 H ++ E++ + + + E+++ + + +DV Sbjct: 575 NCHVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVL 634 Query: 251 -KAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKA 309 + ++ Y N + +G++P++P I N + DFF +Y Sbjct: 635 IERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKIN-NTKTDFFQAKPQTYSKANE 693 Query: 310 VET 312 ++ Sbjct: 694 LKW 696 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 107/313 (34%), Gaps = 21/313 (6%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 + E++ + + W E+V LS D+ W+TL EQ+ + D + Sbjct: 89 LKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKYILAFFAGSDGIVFEN 148 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS-TLCQTKDVDAAYAWSEENAPLQ 132 + + + + E VH +YS + + + + + ++ Sbjct: 149 INNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSEKKELFEAIQTVPCIE 208 Query: 133 RKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 +KAQ + + + ++ A +E F F + RG + LI R Sbjct: 209 KKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISR 268 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWA 247 DE +H + ++ + + ++ E D E + + + Sbjct: 269 DEGLHQEFAVELFKTLRNRPGVDT-------IHAIVREAVDIEKGFILDALPCNLIGMNS 321 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM- 306 + + ++ Y +++ L +G ++ ++ NP + + D +FF Y Sbjct: 322 EKMSEYIEYVSDRLLKQIGVPTIWNSK----NPFDFME-NISLDGKTNFFEKRVGDYGKL 376 Query: 307 --GKAVETEDEDW 317 DE++ Sbjct: 377 DDDTDEIGFDEEF 389 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 122/327 (37%), Gaps = 37/327 (11%) Query: 26 LTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTP 85 S FW ++ L D W L Q++T+ T D+ + ++MP P Sbjct: 42 ARSQFWTETEISLEADKKQWPNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRP 101 Query: 86 HEEAVLSNISFMEAVHARSYSSIFSTLC--QTKDVDAAYAWSEENAPLQRKAQIIQQHY- 142 E +L S+ E +H+R+YS+I + + +D+ E A + ++ + Y Sbjct: 102 ELEGMLKQWSYFEDLHSRAYSNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQ 161 Query: 143 -----------RGDD-----------------PLKKKIASVFLESFLFYSGFWLPMYFSS 174 RGD+ L A LE+ FY+ F + Sbjct: 162 LGQYFIAVRDHRGDNTYPETEFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAE 221 Query: 175 RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNEL 234 L A ++LI +DEA+H Q ++ +E + A LL+ E+ Sbjct: 222 NDILQGIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEI 281 Query: 235 QYTDELYAETPW----ADDVKAFLCYNANKALMNLGYE--PLFPAEMAEVNPAILAALSP 288 ++ ++ A+ ++ +L + A M++G E P P I+ L Sbjct: 282 EWGHFIFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341 Query: 289 NADENHDFFSGSGSSYVMGKAVETEDE 315 + + G++Y +G+ ET + Sbjct: 342 TSLQPAPQEIQIGAAYRVGQVTETSTD 368 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 101/304 (33%), Gaps = 18/304 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 + +++ + T+ FW+ E++ LS D W+ + E+ V LD + Sbjct: 114 EHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFFASLDQIVME 173 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + + + P + EAVH SYS + T T++ + + Sbjct: 174 NIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPII 233 Query: 132 QRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++KA ++ + ++ + LE F F + R K + LI Sbjct: 234 EKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIA 293 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPW 246 RDE +H Y+ ++ + ++ E ++ Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 + ++ + A+ L LGY+ ++ NP + +FF + Y Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA----NPFEWMD-MISLQGKTNFFENRVAEYSK 401 Query: 307 GKAV 310 + Sbjct: 402 PGVL 405 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 113/302 (37%), Gaps = 22/302 (7%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA-WQTLTVVEQQLTMRVFTGLTLLDTLQ 70 + + + L ++ + +N+W+PE+ L+ND ++ L +E+ + + + Sbjct: 26 DSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWV 85 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 + L E H ++ I L YA E Sbjct: 86 GQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLD--LKPHEVYAMHENVKE 142 Query: 131 LQRKAQI-------IQQHYRGDDPLKKKIASV-FLESFLFYSGFWLPMYFSSRGKLTNTA 182 ++RKA + + ++ ++ LE F+SGF P+ F RG L N A Sbjct: 143 IKRKADFEVKRAMALCEEPTEENLIEDIFVYYAILEGLFFFSGFVTPLAFGRRGVLKNVA 202 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 L+R I++DE H + Y + ++ + + K L+ E D E +Y Sbjct: 203 ALVRWILKDETRHLAFGIYLLNELLKD---KNKNDYKDKFRVLMEEAVDIETEYARVAMP 259 Query: 243 ETPWADDVKA---FLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 E + ++ Y A++ + +LG++ ++ + NP + + +FF Sbjct: 260 EKIIGLSFETYTSYVKYLADRRMRSLGFDAIY----GQKNPMKWLTTQTDLPDLTNFFEA 315 Query: 300 SG 301 Sbjct: 316 KV 317 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 103/297 (34%), Gaps = 16/297 (5%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 E++ + + FW E++ D W+ LT E+ +++ D + L Sbjct: 79 EMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQ 138 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQRKAQIIQ 139 A P + ME++H Y + L KD + ++ +++K Q Sbjct: 139 VAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQWAI 198 Query: 140 QHYRGDDPLKKK-IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYY 198 + ++ L + +A +E F F + +RG L I RDE +H + Sbjct: 199 NWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDEGLHRDF 258 Query: 199 IGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFLC 255 +K + +++ E E ++ + ++ Sbjct: 259 ACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMNCKLMSQYIE 312 Query: 256 YNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVET 312 + A+K L+ +G E + NP + + + +FF + Y + + + Sbjct: 313 FVADKLLVEMGLEKHYNVT----NPFPFMD-NISLENKTNFFEKRVAEYQRAQVMAS 364 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 18/318 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I + ++ + FW ++ + NDI +T LT E V T+ + Sbjct: 19 IKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVGE 78 Query: 73 IGAPSLMPD-ALTPHEEAVLSNISFMEAV-HARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 + P + + S +E HA Y+ + L D +A Y +E+ Sbjct: 79 DYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLY--LDDEAFYTSWKESEE 136 Query: 131 LQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR----GKLTNTADLIR 186 L R+ Q + + D K A F+E + YS F +F ++ + N + Sbjct: 137 LSRRIQFVGKSVNDPDDAKSFAAFTFIEGAVLYSSFAFLKHFQAQECGKDLMRNICRGVD 196 Query: 187 LIIRDEAVHGYYIGYKYQ----KNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 L + DE H +Q + EK R +LK+ ++ +++D+E D ++A Sbjct: 197 LSVADEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFA 256 Query: 243 E---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 E AD+++ F+ N L NLGYEP+F E + + NA + HDFF+G Sbjct: 257 EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTI--NAKKFHDFFTG 314 Query: 300 SGSSYVMGKAVETEDEDW 317 SGS Y + E + W Sbjct: 315 SGSEYNINWNREGFSDCW 332 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 113/306 (36%), Gaps = 15/306 (4%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 +E+ + + W +++ L++D+ W+ L VE++ ++ T LD + Sbjct: 76 YPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSVGQL 135 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + +P +L + + E H ++Y+ + TL + +A+ + + Sbjct: 136 YHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLGLPESDYSAFL---KYKQMTD 192 Query: 134 KAQIIQQHYRGD--DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 K + + + +V+ E ++ F + + F G + ++ IRD Sbjct: 193 KTDFMSDMRTDTIGNVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRD 252 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD--- 248 E VH + ++ + + ++ L E+ E + D ++ E + Sbjct: 253 ENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKR 312 Query: 249 -DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 DV ++ Y + + LG + NP + + + + +FF + Y +G Sbjct: 313 VDVINYVKYILQRRTVQLGL----SNKTDLQNPILWVSWLISGRDVTNFFENRVTEYDVG 368 Query: 308 KAVETE 313 Sbjct: 369 GLEGDW 374 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 124/322 (38%), Gaps = 23/322 (7%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLD 67 +N+ E W + + WL ++ + +DI W + LT E+ + + G + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 T + + P + + E +HA +YS + L +D +A+ E+ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILG----LDNFHAFLED 123 Query: 128 NAPLQRKAQIIQ------QHYRGDDPLKKK-IASVFLESFLFYSGFWLPMYFSSRGKLTN 180 + + + ++ Y ++ + + S E +S F + + F +L Sbjct: 124 DVIMNKLKSLMDVRNSDHGKYNKEEIARSVALFSAAAEGVQLFSSFAVLLSFRKSNRLKG 183 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 I +RDE++H ++ E+ G +E ++ + + NE + D++ Sbjct: 184 VGQQIIFSVRDESLHSEAGCKIFRTFCEEN-KGLKEIVERSVYHGVDLALKNEFVFIDKI 242 Query: 241 YAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 + +++K F+ AN L LG+ + + ++ ++ + ++ DF Sbjct: 243 FGGRDLCTIKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDNMNWFYITISGEQQTDF 302 Query: 297 FSGSGSSYVMGKAVETEDEDWN 318 F + Y +EDWN Sbjct: 303 FDNRETGYSKP------NEDWN 318 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 14/271 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I + E + S FW E+V ++ D + TLT EQ V D + N Sbjct: 41 IQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNEN 100 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQ 132 + + +E +H+ YS + TL ++ + E ++ Sbjct: 101 LVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIR 160 Query: 133 RKAQIIQQHYRGDDPLK-KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 +KA Q+ D + +A +E F F + RG + LI RD Sbjct: 161 KKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 220 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWA---D 248 E +H + ++ K ++ + D++ E E ++ E + Sbjct: 221 EGLHTDFACLLHKYINNKCTVIE---------DIVREAVAIEQEFLSESLPVSLIGMNCK 271 Query: 249 DVKAFLCYNANKALMNLGYEPLFPAEMAEVN 279 + ++ + A++ L LG ++ ++ Sbjct: 272 LMCQYIEFVADRLLFALGERKIYTFLTHSIS 302 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 115/320 (35%), Gaps = 22/320 (6%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLT-VVEQQLTMRVFTGLTLLDTLQNVIG 74 + ++ + W+ ++ L +D+ W+ + E+ + T T D + Sbjct: 22 YQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVVVADNY 81 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK 134 +P L ++ E +H +Y+ T D+ + E ++ + Sbjct: 82 KSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGLP---DSMFGRFREYQEMRER 138 Query: 135 AQIIQQHYRG---DDPLKKKIASVFLESFLFYSGFWLPMYFSS---------RGKLTNTA 182 ++ Y + + + F E F + F+ RG+ Sbjct: 139 NDLMATQYDPSMVEGLAMGLVHTTFNEGVCLMGAFANLLQFNRFDVPGFNGYRGRYKGLT 198 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 + + +RDE +H Y+K M + +E K +DL + E + D + Sbjct: 199 KINKWSLRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFK 258 Query: 243 E---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN-HDFFS 298 + T D+ KA++ Y N+ L+ LG++ +F + P I L + +FF Sbjct: 259 KYQLTMTKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPC-PWIEEILGGAGGKRDSNFFE 317 Query: 299 GSGSSYVMGKAVETEDEDWN 318 +Y A+ E DW+ Sbjct: 318 TRVDNYQASGALVGE-LDWS 336 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 109/312 (34%), Gaps = 27/312 (8%) Query: 23 WNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDA 82 + +L S W ++V + DI W+ + +++ ++ + D + + M + Sbjct: 33 YKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREI 92 Query: 83 LTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQRKAQIIQQH 141 + + E VH+ +YS TL K+ ++ E++ +++ AQ ++Q Sbjct: 93 KVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQW 152 Query: 142 YRGD--DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYI 199 D ++ + +E LF + F + + + I RDE VH + Sbjct: 153 MDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFA 212 Query: 200 GYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW------ADDVKAF 253 + + I + +L E + ++ + + + + + + Sbjct: 213 CFLISNYVYNIPEEKI------IHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQY 266 Query: 254 LCYNANKALMNLGYEPLFPAEMAEVNPAI-LAALSPNADENHDFFSGSGSSYVMGKAVE- 311 + Y + + + ++ NP + N E +FF + Y + Sbjct: 267 IRYFTDNLCFMMQCKSIY----KVGNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDA 322 Query: 312 ------TEDEDW 317 D+D+ Sbjct: 323 FAFKLFLNDDDF 334 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 120/309 (38%), Gaps = 14/309 (4%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +++N+ D +++ + +N W P +V S + ++ LT EQ + F L+ D+ Sbjct: 28 VDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEALTDNEQSIYKMTFAQLSFNDS 87 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW--SE 126 Q A ++V+S E H++SY+ + +++V Y + + Sbjct: 88 AQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAVLLDACGNSEEVFNLYKYDAAL 146 Query: 127 ENAPLQRKAQIIQQHYRG--DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 LQ Q + G D L +ASV LE F GF K+ D+ Sbjct: 147 NKKNLQVAEQFAKYIDGGSADKMLLSAMASVNLEGIYFLLGFSYIYLLGD--KVPGARDM 204 Query: 185 IRLIIRDE-AVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE 243 I+ I RDE H ++ ++ ++ A+ ++ + EL+Y L + Sbjct: 205 IKFIARDELNTHLPLFANIFKTIQKENNIATS--TIDAAYKMIQDAVKIELEYGHYLLDQ 262 Query: 244 TPWA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 P + ++ + AN L +G +P+F ++ + +FF Sbjct: 263 FPIMGVTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFES 322 Query: 300 SGSSYVMGK 308 + S+Y Sbjct: 323 NVSNYAKSS 331 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 20/306 (6%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I K + + N+W E+V L+ D+ W L+ ++ M V D + N Sbjct: 114 IKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHVLAFFAAADGIVNA 173 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDAAYAWSEENAPL 131 +L+ E ME H YS + +T + + + + Sbjct: 174 NIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALRNKLINSIKTMPSI 233 Query: 132 QRKAQIIQQHYRGD-DPLKKKIASVFLESFLFYSGFWLPMYFSSR--GKLTNTADLIRLI 188 ++KA + + D K +A +E F F + +R + + I Sbjct: 234 KKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFI 293 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETP 245 RDE H Y ++ + ++ E + E ++ ++ Sbjct: 294 ARDENKHVELACIMYSLLNNRLKESV-------VYQIIDEAIEIEEEFINDSLPCKLLGM 346 Query: 246 WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 ++ + ++ Y A++ L++LGY F + NP + +FF +Y Sbjct: 347 NSELMSQYIKYVADRLLVDLGYRKKFNVD----NPFEYMK-KIDVFVKANFFEKRNDAYS 401 Query: 306 MGKAVE 311 Sbjct: 402 NANIDN 407 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 96/323 (29%), Gaps = 39/323 (12%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + W E+ LS D W L V E+ + DT+ N+ Sbjct: 14 IENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVNI 73 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSS-IFSTLCQTKDVDAAYAWSEENAPL 131 + +E VH+ YS +F + +++ + + + Sbjct: 74 NLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDCI 133 Query: 132 QRKAQIIQQHYRG-------------------------DDPLKKKIASVFLESFLFYSGF 166 ++KAQ + ++ IA +E F F Sbjct: 134 KKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEGIFFSGSF 193 Query: 167 WLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLL 226 + ++G + LI RDE +H + Y + + Sbjct: 194 AAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYY----NNYIPINEKLSPQQILSMF 249 Query: 227 LELYDNELQY---TDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL 283 +E D E ++ Y A ++ ++ + A++ L+ L P NP Sbjct: 250 IEAVDIEKEFFTTALPCYLLGINATEMCKYIEFVADRLLVEL----RQPKHFNTPNPFNF 305 Query: 284 AALSPNADENHDFFSGSGSSYVM 306 + + + +FF Y Sbjct: 306 MT-NISLEGKTNFFERRVGEYKR 327 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 104/307 (33%), Gaps = 20/307 (6%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++ + +W E++ SND + + Q R+ D++ N+ L Sbjct: 63 DLYKKQKDAYWTAEEIDFSNDRHDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK 122 Query: 81 DALTPHEEAVLSNISFMEAVHARSYS-SIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQ 139 E ME H+ Y+ + + + D + A ++R Q Q Sbjct: 123 -ITVKEAEIAYGFQQMMEDTHSEVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQ 181 Query: 140 QHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFS---SRGKLTNTADLIRLIIRDEAVH 195 + + + E +F F + + LI +DE +H Sbjct: 182 RWINSKRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNLIAKDEGMH 241 Query: 196 GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY---AETPWADDVKA 252 + Y + ++S + +L+ E + +T + + + Sbjct: 242 TIFGCVIYTFIIYRLSFEE-------ICELMKEAVEICKSFTKDAICVDMIGMNVELMYN 294 Query: 253 FLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVET 312 ++ Y A++ ++ LGYE +F ++ + +++ +FF + Y + Sbjct: 295 YIEYVADRLMVYLGYEKIFMTKIPDQ--FQFMDTIGFLNKD-NFFERRATEYQKA-YNDR 350 Query: 313 EDEDWNF 319 DWNF Sbjct: 351 NRADWNF 357 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 137 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 20/315 (6%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I + + ++ ++FW E++ L+ D +Q LT ++ + D L N Sbjct: 40 IKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKY 99 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + P ++ ME +++ YS + + + ++ Sbjct: 100 LIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKH 159 Query: 134 KAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 KA I++ DD L ++ +A E + + + + + A R I RD Sbjct: 160 KAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRD 219 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVK 251 + + + K + E++ + A ++ E Y N L + Sbjct: 220 RGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKF----GMDLKSIH 275 Query: 252 AFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVE 311 ++ + A+ L G E + A VNP A + FF S Y + Sbjct: 276 TYIEFVADGLLQGFGNEKYYNA----VNPFEFMEDVATAGKTT-FFEKKVSDYQKASDMS 330 Query: 312 ---------TEDEDW 317 D+D+ Sbjct: 331 KSATPSKEINFDDDF 345 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 107/320 (33%), Gaps = 54/320 (16%) Query: 25 RLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALT 84 + S FW PE+V L D + L +Q + +LLD++Q + LM Sbjct: 41 EILSFFWRPEEVNLMLDSAQFNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISD 100 Query: 85 PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYR- 143 P + ++ +F E +H+RSY+ I L D + + + ++A+ I ++Y Sbjct: 101 PSLDTWVATWTFSETIHSRSYTHIMRNLYT--DPSKVFDEIVLDEAIMKRAESIGKYYDD 158 Query: 144 -------------------------------------GDDPLKK--KIASVF--LESFLF 162 D +K V LE+ F Sbjct: 159 VLVKTRNWENAKEVYECSIGSCQQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRF 218 Query: 163 YSGFWLPMYFSSRGK-LTNTADLIRLIIRDEAVHGYYIGYK---YQKNMEKIS-LGQREE 217 Y F F + + A +++ I RDE +H + + + +S + Sbjct: 219 YVSFACTFNFHKNMEIMEGNAKIMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKN 278 Query: 218 LKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCYNANKALMNLGYE-PLFP 272 + L +L ++ L+ + + AF+ Y + G P+ Sbjct: 279 VNKKQLTFLWKLIVKYKEWAAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITD 338 Query: 273 AEMAEVNPAILAALSPNADE 292 A P I L+ + + Sbjct: 339 APTKHPYPWIREYLNSDLVQ 358 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 122/313 (38%), Gaps = 22/313 (7%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + + ++ S+ W ++ +DIP W+ ++ E+ +V + DTL A Sbjct: 79 YQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIA 138 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK----DVDAAYAWSEENAPL 131 + P + + + E VH R Y++ L + K D+ AY E AP+ Sbjct: 139 -IFADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPE-FAPI 196 Query: 132 QRKAQIIQQHYRGDDPLKKKIA--SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++K + + ++ + ++ V E+ +F + F + + F + I Sbjct: 197 KKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASFAILLKF-RAPYMRALVLGNEFIR 255 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET---PW 246 RDE +H + + ++ S + +LL E + EL++ + + E Sbjct: 256 RDETLHFRFYAELLRLMPDRPSDER-------IAELLTEATEIELEFAEYVVPEGVKYIT 308 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEV--NPAILAALSPNADENHDFFSGSGSSY 304 D + + N N+ L P++ + V +P + + +++ +FF G + Y Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMN-TLESEQKINFFEGKATEY 367 Query: 305 VMGKAVETEDEDW 317 + + + Sbjct: 368 NTKQYKVDFNNLF 380 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 3/171 (1%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 E + + + FW E+V L D+ W+ LT E+Q + D + Sbjct: 329 EFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISSILAFFAASDGIVTENLCSRFST 388 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFS-TLCQTKDVDAAYAWSEENAPLQRKAQIIQ 139 + +E +H+ Y+ + + + + + ++ KA Sbjct: 389 EVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCL 448 Query: 140 QHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 + + ++ A +E F S F + RG L LI Sbjct: 449 RWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELI 499 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 115/316 (36%), Gaps = 18/316 (5%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVI 73 + ++ + +FW+ +V + D+ +Q+ L E+ + ++ Sbjct: 14 EYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVSV-KT 72 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 +L P + S + E H+ +YS + L + A+ E +++ Sbjct: 73 FWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGY----NDAFNHVVEIPAIKK 128 Query: 134 KAQIIQQHYRGDDPLK-------KKIASVFLESFLFYSGFWLPMYFSS-RGKLTNTADLI 185 + + + + + S+ +E+ +S F + + F+ +G + N +++I Sbjct: 129 RIDFLSNVLKHANSTTPKEYVSSLLLFSILIENVSLFSQFAIILSFTRFKGYMKNVSNII 188 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA--- 242 DE +H Y K E+ + + L+ + E + D ++ Sbjct: 189 AWTSVDEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGE 248 Query: 243 -ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + +++ F+ Y + +L +G + + E P + A+ DFF+ Sbjct: 249 IDNVSKENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRP 308 Query: 302 SSYVMGKAVETEDEDW 317 Y TE++ + Sbjct: 309 VDYTKHDKSITENDLF 324 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 16/293 (5%) Query: 19 DLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL 78 LE+ N W P +VPL D+ L + + +FT L + + L N+ L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNIN-IEDL 74 Query: 79 MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS---EENAPLQRKA 135 + + + ME +H + Y++I + L + ++ Y+++ ++ LQ K Sbjct: 75 LSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFK-NNITEVYSYACDIMNDSALQEKL 133 Query: 136 QIIQ-QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAV 194 + + + D +K + + +E F S F+ F RG + I RDE + Sbjct: 134 RWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEML 193 Query: 195 HGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD--DVKA 252 H Y + + + + L E + E ++ + +++ Sbjct: 194 HTSAAALLYNTM----TKSSERPSEDWIYKLFREAVEVEFKFIAAKGYGVSLVNVHEIRQ 249 Query: 253 FLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 FL A++ L ++ P++ + E P + + ++ +FF S Y Sbjct: 250 FLQATADRILESINLNPIYGSLPPENCPLAYTS----STKSVNFFERDNSDYT 298 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 119/318 (37%), Gaps = 25/318 (7%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + + + FW E++ S+DI W + + ++ + + L L + Sbjct: 55 IKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKASDHDKSIIKKSLAFL-CSSVLGSF 113 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 + + P + +E +H YS L T ++ + + + Sbjct: 114 YLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSLAIDQLVHNTDEIKKMFKDVDNAKFI 173 Query: 132 QRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 +RK ++ + + +K +A +E+ F+ M + + I+LI+ Sbjct: 174 ERKKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLIL 233 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 +D VH + Y + +++ G E + + A ++ EL E Y ++ + D Sbjct: 234 KDHIVHCDFQMSIYSELKKRLDPGIIERIVTEAVEI--ELETLEDDYFNKQL-DKETKAD 290 Query: 250 VKAFLCYNANKALMNLG----------YEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 +K + Y ++ LM G Y+ L V P ++ S N + FS Sbjct: 291 IKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTK----FSK 346 Query: 300 SGSSYVMGKAVETEDEDW 317 + + + + D+++ Sbjct: 347 TE---KIAASEISFDDEF 361 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 119/327 (36%), Gaps = 30/327 (9%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + +++ + + W ++V L N +QT E ++ + D+ + Sbjct: 36 YPELFDLYKQQKAQDWSEDEVNLENSRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNII 95 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 L P A+++ + +E +HA +YS I D +N + ++ Sbjct: 96 TLLAPFISNNEFAAMVTKQTEIENLHALTYSEIVRQCIS--DPTEMIKRVMDNQAVLDRS 153 Query: 136 QIIQQH--------------YRGDD------PLKKKIASVFLESFLFYSGFWLPMYFSSR 175 I Y DD +K ++ + LE F + F + R Sbjct: 154 STIDDVMAELEILGAKKRLGYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQR 213 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE-LKSFAFDLLLELYDNEL 234 G A L++ I+ DE +H ++ Q + K +L E+ +NE Sbjct: 214 GLFMGVAQLVQKIMLDEILHSKMDFAALDILLKDPVWFQSYQNCKGDVQRILDEVMENES 273 Query: 235 QYTDELYAETPWA-----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN 289 + D +++E +K ++ Y+A L + +P + P + ++ + Sbjct: 274 NWADYIFSEGRSVVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNID 333 Query: 290 ADENHDFFSGSGSSYVMGKAVETEDED 316 + +N + S Y++ V +DED Sbjct: 334 SQQNAN-QEQDNSQYLLNTMVN-DDED 358 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 111/312 (35%), Gaps = 11/312 (3%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDTLQN 71 I + + + + + FW E++ S DI W +T E++ +R+ D + Sbjct: 41 IKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYFIRLLALFASND-MDR 99 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDAAYAWSEENAP 130 L + TP + ++ +H Y + +L + + + + ++ Sbjct: 100 ENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKDDEKRTSMFEEIKDLTN 159 Query: 131 LQRKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 ++ K + + + +D L +K IA + S + + F G + + + Sbjct: 160 IKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNM 219 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD 248 +RD +H + Y +I +++ A ++ + L D Sbjct: 220 LRDRGLHVDFCCLMYAHLKNQIDSEIVQKIIVDAVEIEKKSLLKALPIIKVNLK----ID 275 Query: 249 DVKAFLCYNANKALMNLGYEPLFPA-EMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 ++ F+ Y A+ L+ G E + A E ++ + N+ + S + Sbjct: 276 EMNQFIEYVADSILVAFGNEKHYNATNPYEFMENVVLPGNTNSLAKTIADAQKASEFAKT 335 Query: 308 KAVETEDEDWNF 319 + E ++F Sbjct: 336 SKPDAETTTFSF 347 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 1/131 (0%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I +++ + ++FW E+V LS D+ W++L E+ V D + N Sbjct: 17 IQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFISHVLAFFAASDGIVNEN 76 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQ 132 + ME +H+ YS + T + + + + + E ++ Sbjct: 77 LVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVK 136 Query: 133 RKAQIIQQHYR 143 +KA Sbjct: 137 KKADWALNWIG 147 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 115/324 (35%), Gaps = 18/324 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTL 65 +N+ + L+ + +W+ +V + D + L++ E+ + Sbjct: 6 KRVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQ 65 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 ++ ++ P + S + E H+ +YS + L + + Sbjct: 66 IEVAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE----FEKL 120 Query: 126 EENAPLQRKAQIIQQH---YRGDDPLKKKIA----SVFLESFLFYSGFWLPMYFSS-RGK 177 + ++R+ + + D K ++ S+ +E+ +S F + + F+ +G Sbjct: 121 LDVPVIRRRVDYLSNVLKDTKSQDNRKYMVSLILFSILIENVSLFSQFAILLSFTRFKGY 180 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 + N +++I DE +H Y K E+ EE + + + + E Sbjct: 181 MKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDIL 240 Query: 238 DELYAETPWA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 D ++ E D+ F+ + +++L + +F ++ + A+ Sbjct: 241 DWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSL 300 Query: 294 HDFFSGSGSSYVMGKAVETEDEDW 317 DFF+ Y T ++ + Sbjct: 301 DDFFAKRPVEYTKHDKSITANDLF 324 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 113/316 (35%), Gaps = 18/316 (5%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 L+ + + +++W+ ++ DI ++ T EQ R + ++ +Q Sbjct: 48 EYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-VQVKT 106 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + D V + E H +YS + L + + E +Q+ Sbjct: 107 FWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE----FEQITEVPAVQQ 162 Query: 134 KAQIIQQHYRGDDPLKK-------KIASVFLESFLFYSGFWLPMYFSSR-GKLTNTADLI 185 + + + ++ K + S F+E +S F + F K A+ + Sbjct: 163 RIEYLDEYLEMGSSENKQESVMGILMFSTFVEHVSLFSQFLIMTSFDKHEKKFKGIANAV 222 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETP 245 ++E +HG + + E+ ++ D + Y+ E + D + + Sbjct: 223 EATSKEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGE 282 Query: 246 WA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + + AFL N++L N G +P+F + V+ + +DFFS Sbjct: 283 LDFLPREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRS 342 Query: 302 SSYVMGKAVETEDEDW 317 ++Y T D+ + Sbjct: 343 TTYNKHTQSVTADDMF 358 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 96/286 (33%), Gaps = 16/286 (5%) Query: 42 IPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDAL--TPHEEAVLSNISFMEA 99 + W LT E++ D + + + E + E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 100 VHARSYSSIFSTLCQ-TKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPL-KKKIASVFL 157 +H +Y ++ L K + A ++ A +++ PL ++ IA L Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPERIIAFAAL 120 Query: 158 ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE 217 E +F F YF+ +L I +DEA+H + Y+ ++ I R Sbjct: 121 EGVIFTGSFAAIHYFTITNRLKGLRKANEWISKDEALHQRFAEAVYRYIVDVIKAFPRV- 179 Query: 218 LKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAE 274 + ++L D + + A+ + ++ A+ +LGYE F ++ Sbjct: 180 SQERVQEILGSAIDAVSPFIHDCLRFKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSD 239 Query: 275 MAEVNPAILAALSPNADENHDFFSGSGSSYVM---GKAVETEDEDW 317 + + D +FF + Y G ++D D+ Sbjct: 240 SSLDYMLL-----IGMDNKTNFFEEVVADYAKGLEGGGEFSKDADF 280 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 118/332 (35%), Gaps = 29/332 (8%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + E++ + W ++V LS I + T + + ++ D++ Sbjct: 33 KYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKSTYDVMVQTLMWQWEADSVAARSI 92 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK 134 P +L S +E +HA +YS I C + E L R Sbjct: 93 ICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQ-CLPNAREIIEEIQENQNVLSRS 151 Query: 135 ---------AQIIQQHYR------GDDPLKKKI-----ASVFLESFLFYSGFWLPMYFSS 174 ++I YR +D ++K I A + LES F + F + Sbjct: 152 GVIVKYMQELEVIGAKYRLDPSSVKEDIVRKCILRALFALLALESIEFIASFACTFAVAE 211 Query: 175 RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQR-EELKSFAFDLLLELYDNE 233 +G A L++ I+ DE +H + + + E+K ++L E+ E Sbjct: 212 QGIFVQVAQLVQKIMLDEMLHSKGDFAIIDILLNDPAWEKSFLEIKGELKEILDEVRTKE 271 Query: 234 LQYTDELYAETPWA-----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSP 288 ++D +++E +K ++ YN + G + F + P + + P Sbjct: 272 YGWSDYIFSEGRAIIGLNSPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKP 331 Query: 289 NADENHDFFSGSGSSYVM-GKAVETEDEDWNF 319 + + + S + Y + + E+E W F Sbjct: 332 SLQQTAN-QEMSNTDYRVNTTVNDAEEEIWEF 362 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + + ++FW E+V LS D+ W L E+ RV D + Sbjct: 105 IKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKLNDNERYFVSRVLAFFAASDGIVGE 164 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 + + +P ++ ME +H+ YS + T ++ D + E + Sbjct: 165 NLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVKDPQEADFLFNAIENIPCI 224 Query: 132 QRKAQIIQQHYRGDDPL--KKKIASVF 156 +KA+ + + D L ++ +A Sbjct: 225 TKKAEWAIKWIQDKDALYAERLVAFCC 251 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 108/326 (33%), Gaps = 30/326 (9%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 + +S + ++ N W ++V +D + +L Q+ TL+D+ Sbjct: 27 DSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAFKLNIAYQTLMDSGVT 86 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTL---CQTKDVDAAYAWSEEN 128 + L + + + I+ E +HA SYS S + T +D Y Sbjct: 87 SGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHEATDTLDLVYNDEFVK 146 Query: 129 APLQRKAQIIQQHYRGDDP--------------LKKKIASVFLESFLFYSGFWLPMYFSS 174 ++++ ++ + LK I LES F F + ++ Sbjct: 147 HRMEKEVELFGNVDELCNLENSPATLDEKKQAVLKLLIGIYLLESVKFPFSFLVTFTINN 206 Query: 175 R--GKLTNTADLIRLIIRDE-AVHGYYIGYKYQKNMEKISLGQREELKS-FAFDLLLELY 230 + I+LI DE H ++ G KS + + + Sbjct: 207 NYDNAIAGFTKTIKLIAHDELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMA 266 Query: 231 DN----ELQYTDELYAE----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI 282 + E+++ L+ + + F+ Y A L +LG E + + ++V Sbjct: 267 EFTVNEEIKWAKYLFDGYQVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDW- 325 Query: 283 LAALSPNADENHDFFSGSGSSYVMGK 308 + +N + +SY G Sbjct: 326 FNSYRDINKQNAALQETTNTSYQKGA 351 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 25/297 (8%) Query: 29 NFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI--GAPSLMPDALTPH 86 N WL ++ D L+ E +F L+ D L G L H Sbjct: 56 NRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGGLSGLFEQKDILH 115 Query: 87 EEAVLSNISFMEAVHARSYSSIFSTLCQTKD--VDAAYAWSEENAPLQRKAQIIQQHYRG 144 +E H+R Y+ I L D A + + ++ K ++ R Sbjct: 116 ---YYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAKVDWLEARVRE 172 Query: 145 DDPL-KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKY 203 + +K I + +E F + F Y + L T LI RDEAVH Y Y Sbjct: 173 CASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIY 232 Query: 204 QKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE-------LYAETPWADDVKAFLCY 256 + G + + L + + E+ + + + A ++ ++ + Sbjct: 233 NNYLG----GHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAA-IENYVRF 287 Query: 257 NANKALMNLGYEPLFPAEMAEVN-PAILAALSPNADENHDFFSGSGSSYVMGKAVET 312 +A++ L + +PLF A + + P L + D++ +FF +SY + Sbjct: 288 SADRLLGLIHMKPLFSAPPPDASFPLSLMS----TDKHTNFFECRSTSYAGAVVNDL 340 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 119/316 (37%), Gaps = 18/316 (5%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVI 73 L+ + + +++W+ + S D+ ++ T E+ + R + ++ +Q Sbjct: 26 EYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE-VQVKT 84 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 + + V + E H +YS + L T+D + + ++ Sbjct: 85 FWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED----FEEVTDVPAIED 140 Query: 134 KAQIIQQHYRGDDPLKK-------KIASVFLESFLFYSGFWLPMYFSS-RGKLTNTADLI 185 + + + ++ + K + S F+E +S F + M F + K A+ + Sbjct: 141 RIEYLDKYLEKSESDDKQEYVMSILLFSTFVEHVSLFSQFLIMMSFDKYKKKFKGIANAV 200 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETP 245 ++E +HG + + E+ E+ + ++ E++ D ++ E Sbjct: 201 EATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGE 260 Query: 246 WA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 V AFL N++L N+G EP+F + + +++DFFS Sbjct: 261 LEFLPRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRS 320 Query: 302 SSYVMGKAVETEDEDW 317 ++Y T ++ + Sbjct: 321 TTYNKHAQSVTAEDMF 336 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 111/334 (33%), Gaps = 35/334 (10%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 K E++ + + W ++ P ++++ + + + DT A Sbjct: 23 YPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSLA 82 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIF-------STLCQTKDVDAAYAWSEE- 127 + P + S +E +HA +YS I T+ + + A + Sbjct: 83 FAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPETILDEINQNVAVQDRLKT 142 Query: 128 ---------NAPLQRKAQIIQQHYRGDDP-------LKKKIASVFLESFLFYSGFWLPMY 171 + + + ++ DP LK A LE F + F Sbjct: 143 VNRVLEELLDEGINYRLSYVRDSLLDKDPLHFHKVILKGLFAVTALEGISFMASFACTFA 202 Query: 172 FSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKS---FAFDLLLE 228 ++ K A ++ I+ DE +H ++ + ++ + +L E Sbjct: 203 LDAQDKFQGIAQAVQKIMLDEILHTKIDIEVLKETLR--DDEWQKAFQQILPEIKVILDE 260 Query: 229 LYDNELQYTDELYAETPW-----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL 283 + ++E +++ +++E + ++ YNA G F A ++ Sbjct: 261 VVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMI 320 Query: 284 AALSPNADENHDFFSGSGSSYVMGKAVETEDEDW 317 + + ++N + +Y++ V+ + + Sbjct: 321 KKMEIDKEQNAN-QEQQNGAYLLNTVVDDLNSGF 353 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 15/171 (8%) Query: 147 PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKN 206 ++ IA +E F F + +G + LI R E +H + Y Sbjct: 98 FAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLYSLL 157 Query: 207 MEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALM 263 +++ ++ E + E Q+ E A + ++ + ++ L+ Sbjct: 158 QKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLV 210 Query: 264 NLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETED 314 LGYE + E NP N +FF Y + + D Sbjct: 211 ALGYERKYNVE----NPFDWMEF-IFLQGNANFFQRRMGDYQKASIMSSLD 256 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%) Query: 214 QREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPA 273 ++ L+ + +L L +NE++YT+ +Y E+ +V FL YNAN+AL NLG+E L+ Sbjct: 2 DKKMLEEKMYSILYSLMENEIEYTNVIYRESGLEKEVVNFLKYNANRALENLGFEKLYTV 61 Query: 274 EMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDW 317 + +NP +L LS + HDFFS G+ Y G E EDED+ Sbjct: 62 DA--INPIVLNGLSTET-KTHDFFSTKGNGYQKGVYEELEDEDF 102 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 + + + ++FW ++V LS D W+ L E+ RV D + N Sbjct: 68 DFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQ 127 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 + P +E +H+ YS + T + + Sbjct: 128 EVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQKQKKF 168 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 4/180 (2%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQ 70 N+IS +++ + +N W+ E++ S+D W + LT E+ V + Sbjct: 80 NEISPLDIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGII 139 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV-DAAYAWSEENA 129 N M P + + ++ +H+ +YS + T + K++ D + E Sbjct: 140 NKNLN-RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIP 198 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 +++KA+ + + K+ +A V ES F F + R + LI Sbjct: 199 CVKKKAEWALKWIN-ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 9/200 (4%) Query: 20 LEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL 78 + ++++ W P + + D WQ + E+++ +R+ + + + P + Sbjct: 25 MRLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSLFVAGEEAVTLDLLPLI 84 Query: 79 MPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA- 135 M A EE L+ F EA H + + + + Sbjct: 85 MAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDLSVFHKDHYRKIFYEYLP 144 Query: 136 ----QIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLIIR 190 +++ ++ +E L +G++ KL IRL+ R Sbjct: 145 QAMGRLVHDPSPEAQAEASVTYNMVVEGVLAETGYYAFYTALQKENKLPGLIQAIRLLQR 204 Query: 191 DEAVHGYYIGYKYQKNMEKI 210 DE+ H Y Y + + + Sbjct: 205 DESRHIGYGTYLLSRLISEN 224 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 93/267 (34%), Gaps = 16/267 (5%) Query: 14 ISDDKDLEVWNR-LTSNFWLPEKVP--LSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 I K E++ + L S+ W E+ + NDI + + + L + Sbjct: 30 IQYPKLWEIYKKRLASSIWSVEQFDQIIRNDISKLSEICNSDHSFIKIILAFLVAN--CK 87 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 D + M+ +H Y ++F L + + + Sbjct: 88 QKTNLWGAFKDIQILEAKHFHGFRLAMKNIHYEMYCNLFEILTEETERSELIE--KMINS 145 Query: 131 LQRKAQIIQQHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 +K+Q ++ D+ ++ I V +E + F+ + RG ++ LI Sbjct: 146 TMKKSQYTKKWLNSDNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIF 205 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 RDE H ++ Y + ++ L+ E D E ++ L E D Sbjct: 206 RDEEFHSNFLYSLYSNL------KHSKLPQTLVHSLVKEAVDIEKEFITSLPTELIELDR 259 Query: 250 --VKAFLCYNANKALMNLGYEPLFPAE 274 + ++ ++ L++ GYE LF E Sbjct: 260 NSMYQYVEVVSDNILISFGYEKLFHTE 286 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 1/103 (0%) Query: 35 KVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNI 94 +V LS D+ W+ L E+ V D N + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 95 SFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPLQRKAQ 136 ME VH+ YS + T +K + + + +++KA+ Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 107/305 (35%), Gaps = 18/305 (5%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + L + + ++W+ + +D+ E+ L R + ++ + Sbjct: 14 EYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV-KLF 72 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY-AWSEENAPLQR 133 + P V + E HA +Y+ L + ++ A+ E + L+ Sbjct: 73 WARVYDRFPKPEIAEVGLTFAESEVRHANAYAH----LLELLGLEEAFGQALEGASALRD 128 Query: 134 KAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG-KLTNTADLI 185 +AQ + + R + L + S F E +S F++ M + RG + ++ I Sbjct: 129 RAQALGEALRRAQGKDLREYALALFLFSAFTEHVSLFSQFYVLMALNRRGNRYKGISNAI 188 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETP 245 ++E VHG + + + E + A L L+ E D L++ Sbjct: 189 EATSKEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGE 248 Query: 246 ----WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + FL N+ L G P FP + + L AD+ DFF+ Sbjct: 249 PALVGHRETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEVDFFNKRS 308 Query: 302 SSYVM 306 +Y Sbjct: 309 VAYAR 313 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 4/197 (2%) Query: 26 LTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTP 85 N W ++ ++DI + L +FT L+ D N+ L Sbjct: 20 AIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNIN-LDQLKQLFPQK 78 Query: 86 HEEAVLSNISFMEAVHARSYSSIFSTLCQTKD--VDAAYAWSEENAPLQRKAQIIQQHYR 143 + +E VH+R+Y+ + L D + + ++ K + Sbjct: 79 DVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETKFDWLNTKIM 138 Query: 144 GDDPLKKK-IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYK 202 ++ + +K + + +E F + F Y + G + LI RDEA+H Sbjct: 139 ENESVPEKYLLMILVEGIFFVASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCI 198 Query: 203 YQKNMEKISLGQREELK 219 + ++ + E ++ Sbjct: 199 FNNYLKDHEMPTDERIR 215 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 1/91 (1%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I + E++ + ++FW E+V LS D W+ LT E+ V D + Sbjct: 22 IQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLE 81 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHAR 103 + M D A +E +H+ Sbjct: 82 NLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 45/132 (34%), Gaps = 14/132 (10%) Query: 197 YYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAF 253 +Y +N+ L + + + ++ + + E ++ + + + + + Sbjct: 99 FYGFQIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQY 158 Query: 254 LCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVET- 312 + + A++ L LG ++ NP L + +FF Y + + Sbjct: 159 IEFVADRLLAALGCGKVY----GVTNPFDWMEL-ISLQGKTNFFEKRVGEYQKASVMSSV 213 Query: 313 -----EDEDWNF 319 ++D F Sbjct: 214 HGNAAFNDDHVF 225 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 15 SDDKDLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 D + ++ + W P + S D+ WQTLT E+ L +R+ + + + Sbjct: 15 RDTVPMRLFEKAKRLGVWNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQAGEEAVTLD 74 Query: 74 GAPSLMPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 P + A EE L++ + EA H ++ + + + Y S A + Sbjct: 75 LLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTGVTGDLSHYHTSNYRALI 134 Query: 132 QRKAQIIQQHYRGD-----DPLKKKIASVFLESFLFYSGF-WLPMYFSSRGKLTNTADLI 185 R D + ++ +E L +G+ R + T I Sbjct: 135 HEALPAAMGRLRDDPSPEAQAIASLTYNMIVEGVLAETGYHAYFTMLERRDLMPGTRKGI 194 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 L+ +DE+ H Y Y + + + + EL + D+ +A Sbjct: 195 GLLKQDESRHIAYGVYLLSRLINAEPRLW-----DVIVERMNELVVYAMGVIDDAFA 246 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 102/312 (32%), Gaps = 18/312 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I + + S FW E D +++ + +L D Sbjct: 34 IKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNMLVKLFELICFYSLKDLHVYEE 93 Query: 74 GA---PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA-AYAWSEENA 129 A ++ P A ME +H Y+ IF T + Sbjct: 94 QALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDAKQKRTIINKVIQLD 153 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLI 188 + +K + + + + + P K+ +++ LF + + Y L ++ I Sbjct: 154 SVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNILIGYCKENSILPCLCNVHEKI 213 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246 RDE +HG + K+ + D E Q+ E+ + Sbjct: 214 HRDEYLHGDFSVMCCNHLNNKLKYER-------LLDYFKMAVKLEYQFAIEMLDLSVLKI 266 Query: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 + VK+FL Y A+ L+NL + F ++ P + + ++ + S + + Sbjct: 267 KKEQVKSFLEYLADTMLVNLKHPKYFNSKYPFTWPE-FNKIVVSENQKTE--SVKKAEDI 323 Query: 306 MGKAVETEDEDW 317 G+ DED+ Sbjct: 324 YGERQIVLDEDF 335 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 80/224 (35%), Gaps = 14/224 (6%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NW+ ++++ FW P + LS D W+ L +E+ + V + + Sbjct: 21 LNWSL----FPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGEE 76 Query: 69 LQNVIGAPSLMPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 + P ++ E L + E+ H ++ F + +D+ Sbjct: 77 AVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDAVNVMEDLSTYTKDLS 136 Query: 127 EN------APLQRKAQIIQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFS-SRGKL 178 N L + + + ++ ++ + ++ +E G+ + + +R L Sbjct: 137 PNYKKIFYEELPKAMWNLSRDPSPENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKIL 196 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFA 222 A ++ LI DE+ H + Y + +++ G + Sbjct: 197 PGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHI 240 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 K E++ RL W + S + ++T + ++ D++ + Sbjct: 40 YPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIKTLAWQWEADSVASRSIV 99 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST--------------LCQTKDVDAA 121 L P A I+ E VHA +YS I + + ++ A Sbjct: 100 NILSPVMTDSRVWAGYVRINDNEDVHALTYSEIVRNSFKDPKVILDEILRVEEAQERMVA 159 Query: 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKK----KIASVFLESFLFYSGFWLPMYFSSRGK 177 A + A A + Q + K IA FLE F + F + G Sbjct: 160 VARTMGEAHDAVHAYALNQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGA 219 Query: 178 LTNTADLIRLIIRDE-AVHGYYIGYKYQKNM-EKISLGQREELKSFAFDLLLELYDNELQ 235 A ++ I +DE +H Y + + + + K +LL E+ E+ Sbjct: 220 FQQIAAAVKKIAQDEFEIHAQYGQEVIRALLATERGKLAYSQCKDKIIELLWEIVKTEVT 279 Query: 236 YTDELYAETPW-----ADDVKAFLCYNANKALMNLGYEP 269 + + L++E A + ++ +NAN A L E Sbjct: 280 WINYLFSEGRELTGVNATKLINWVLFNANAAATFLSIEN 318 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 1/82 (1%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNV 72 I + +++ + ++FW E++ LS D+ W + E+ V D + N Sbjct: 102 IQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNERHFISHVLAFFAASDGIVNE 161 Query: 73 IGAPSLMPDALTPHEEAVLSNI 94 + Sbjct: 162 NLVERFSNEVQAAEARCFYGFQ 183 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 92/244 (37%), Gaps = 16/244 (6%) Query: 19 DLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVE-QQLTMRVFTGLTLLDTLQNVIGAPS 77 ++W + S FW + S D ++T+T E Q++ + + + D++ A Sbjct: 59 TYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEFQEILLCTVGCIAIGDSIVLDRIANG 118 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE-ENAPLQRKAQ 136 L + +A+ S+ E +H + YS++ Y E +N + Sbjct: 119 LKERVTSIELKAMFSDQEAREFIHKKMYSNMLD----VSHRANYYRSEEFKNEYMSVLET 174 Query: 137 IIQQHYRGDDPLKKKIASVFL-ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 + ++ G ++ ++ + + E LF F Y + +G DL L++RDE +H Sbjct: 175 LADKYDIG--YVQVQMFFIMMCEIILFTPMFQTICYAACKGYCPKLCDLNLLVMRDEYIH 232 Query: 196 ---GYYIGYKYQKNME-KISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVK 251 +K++ ++ K + E L ++ Y D +Y K Sbjct: 233 YENARLQSFKFKTKLDRKFARTVLAEFSELTLQLFAKIIG---DYDDGVYNFKHVERHFK 289 Query: 252 AFLC 255 + Sbjct: 290 HVVH 293 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 24/260 (9%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I D ++ + ++FW E +N+ + +L +QL +++ + LD + Sbjct: 36 IHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQLVVKLISYHNRLDRSEVAR 95 Query: 74 GAPS---LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 A L+ D P A E +H+ + + S + T DV Sbjct: 96 PATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSSAIPGTIDV----------PE 145 Query: 131 LQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLII 189 K + + ++ K+ + +F S F + Y + KL + + Sbjct: 146 ADAKIEWLTRNLTSTSCFYIKVILQCISKAIFRSAFGILADYLRNSKKLPTLLSALDTVA 205 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPW 246 +D ++H + M + + + +LL YD E+ Y + Sbjct: 206 KDVSIHLKFA-------MAALEHLKLRPTRETVMELLNSAYDLEMAYCRSVLPMDHMGLS 258 Query: 247 ADDVKAFLCYNANKALMNLG 266 + ++ N N+ L+ G Sbjct: 259 EYHLSQYIKNNVNQCLLITG 278 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 9/187 (4%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 N I + W + + W PE++ LS D + ++++ + L + D + Sbjct: 65 NNIEN-ICYNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIV- 122 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAV---HARSYSSIFSTLCQTKDVDAAYAWSEEN 128 +L + VL+ IS E V H+ YS L + N Sbjct: 123 ---LQNLSDVSEIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVYYKSEHFIN 179 Query: 129 APLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 L Q + + ++ K + E F F Y G +TA R + Sbjct: 180 NELYDIQQF-SKKHSTNNLNKIAFFIMICERLYFLPAFVTVAYLGITGYAPHTALGNRYV 238 Query: 189 IRDEAVH 195 +RDE +H Sbjct: 239 MRDENLH 245 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 104/271 (38%), Gaps = 15/271 (5%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 R +NW D L ++ + + FW P + S D W+ L +Q+ + + Sbjct: 21 RAGGLNW----DAFPLRLFTKGNAKFWNPTDLDFSRDAEDWEGLNSEQQRNSTYLVAQFI 76 Query: 65 LLDTLQNVIGAPSLMPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV---- 118 + P + A +E L+ F EA H + + + T+D+ Sbjct: 77 AGEEAVTEDIQPFMKAMAAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRDLHPFV 136 Query: 119 -DAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLP-MYFSSR 175 + Y L ++++ + ++ + + +E L +G++ ++R Sbjct: 137 AENPYYRQLFYEELPGSLKVLETDPSPVNQVRASVTYNHVIEGSLALTGYYAWQKVCTTR 196 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 G L +L+R I DE H + + ++++ ++ +L+ + Sbjct: 197 GILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDSNWGV-VQERMAELMPLALGM-ID 254 Query: 236 YTDELYAETPWADDVKAFLCYNANKALMNLG 266 + ++ + P+ D + F+ Y A++A LG Sbjct: 255 WVNKQFEVQPYGLDDQEFIAYAADRAQRRLG 285 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 102/301 (33%), Gaps = 26/301 (8%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL-- 66 +NW+ + L+++ + FW P + S D W+ LT E+ R+ Sbjct: 14 LNWDSLP----LKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEE 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 Q++ + M +E L+ +F EA H + + + T D+ Sbjct: 70 SVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDLHHFLDDVP 129 Query: 127 ENAPL--QRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFWLPMYF-SSRGKLT 179 + + + P + ASV +E L +G++ RG L Sbjct: 130 SYRTIFYEELPDCLNALTIDPSPAAQVRASVTYNHMVEGMLALTGYFGWHKICVERGILP 189 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 +L+R I DE H + + ++++ + EL L+ +E Sbjct: 190 GMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWGV-----FETRMNELMPLGLRLIEE 244 Query: 240 ---LYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 LY P+ V F+ Y ++K + G A P L + D Sbjct: 245 GFALYDPMPFDLSVDEFMAYASDKGMRRFG-----TIASARGRPLAEIDLDYTPVQLEDT 299 Query: 297 F 297 F Sbjct: 300 F 300 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 95/270 (35%), Gaps = 20/270 (7%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 +NW + L+++ + FW P + + D W+ L+ E+ R+ T + Sbjct: 14 LNWASLP----LKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEE 69 Query: 69 LQNVIGAP--SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 P S M +E L+ +F EA H + + + ++D+ Sbjct: 70 AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLP 129 Query: 127 ENAPL--QRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFWLPMYF-SSRGKLT 179 + + + P + ASV +E L +G++ R L Sbjct: 130 AYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILP 189 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQR--EELKSFAFDLLLELYDNELQYT 237 +L+R I DE H + + ++++ E + L L L + Sbjct: 190 GMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFA-- 247 Query: 238 DELYAETPWADDVK-AFLCYNANKALMNLG 266 LY + P D K FL Y+ +K + G Sbjct: 248 --LYGDQPPFDLSKDDFLQYSTDKGMRRFG 275 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 109/317 (34%), Gaps = 48/317 (15%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVP--LSNDIPAWQTLTVVEQQLTMRVFTGLT 64 I+WN + +W + FW P + + D W+T++ E++++ + T + Sbjct: 23 KGIDWN----SYPMRLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFS 78 Query: 65 LLDTLQNVIGAPSLMPDALT--PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 + + A ++ E L+ E H ++ ++ KD + Sbjct: 79 AGEEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDTEK-- 136 Query: 123 AWSEENAPLQRKAQIIQ--------QHYRGDDPLKKKIASVF--LESFLFYSGFWLPMYF 172 W+ E P + + + + + + A+ +E +GF+ Sbjct: 137 -WTTEINPSYYELFYVALPSAAYGVKANPSPESILRFTATYMFSIEGIAAETGFYFWRTM 195 Query: 173 SSRGK-LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD------L 225 RG+ L ++++ + DE+ H + Y + + + L+ F + L Sbjct: 196 WERGRHLKGIYEIVKRVAADESRHLAFGTYLTTMLIGEDQSLYDKFLEYFNYAGGLAVRL 255 Query: 226 LLELYDNEL-----------QYTDELYAETPW-------ADDVKAFLCYNANKALMNLGY 267 + + + ++ +Y + +Y E A V+ L Y L N Sbjct: 256 IGTIVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYAAKMVQHRLFYV--NRLRNANR 313 Query: 268 EPLFPAEMAEVNPAILA 284 E L + E P I Sbjct: 314 EKLRYMPLNEAAPVIEN 330 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 88/271 (32%), Gaps = 19/271 (7%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 I D ++ + +NFW E ++DI L + + + LD Sbjct: 33 IEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLNLLSFHINLDNKLICR 92 Query: 74 GAPS---LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 L+ + A E +H + SS+F Q D + S Sbjct: 93 PVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLFNQQLDTNIV--SSNTLFL 150 Query: 131 LQRKAQIIQQHYRGDD----PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 I Y + K+ + V ++ + S L Y L Sbjct: 151 SSYGMDKIIWLYNECENNKCFFKRVLLLVIMKLLFYCSINILRDYLLKEKLLPTFITAFD 210 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE--- 243 I D +H + ++ Q + L+S +++ + E Q+ + + Sbjct: 211 SITNDRIIHTRFAHCTFRLL-------QNKMLESEVLEIIKQALKLEYQFILQYFTIQFF 263 Query: 244 TPWADDVKAFLCYNANKALMNLGYEPLFPAE 274 + +K++L + N L+ GY+ L+ +E Sbjct: 264 NLSTNVIKSYLEWIGNNILLVCGYKTLYTSE 294 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 24/220 (10%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 S + ++WN + ++ W ++ S D W+ L ++ + + Sbjct: 21 KSTVEGLDWNT----FPMRLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSY 76 Query: 63 LTLLDTLQNVIGAP--SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + P + M + E L+ + EA H ++ F ++ + + Sbjct: 77 FLAGEECVARDILPLANAMEELGLIEEALYLTQFARDEANHTVAFRKWFESVG---ETEG 133 Query: 121 AYAWSEENAPLQR--------KAQIIQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMY 171 Y ++ +N P +R + + ++ ++ ++ + E L +G++ Y Sbjct: 134 IYDFTYKNEPYRRLFYEIIPTDMRRLYNDPSPENIVRAVVSYNFVAEGILAETGYYG--Y 191 Query: 172 FSSRGK----LTNTADLIRLIIRDEAVHGYYIGYKYQKNM 207 K L +++LI RDEA H + Y + Sbjct: 192 VKGYEKILPALPGLYKMVKLITRDEARHISFGAYVAALMI 231 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 64.2 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 33/286 (11%) Query: 19 DLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN--VIGA 75 +++ + N W P + S D + LT E+ + + G + + ++ Sbjct: 20 MYKLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSAGEEAVTLDILPM 79 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 + + L+ EA H +S + + + Sbjct: 80 AHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGAMDLSVFHNDHYKRIFYEAL 139 Query: 136 -QIIQQHYRGDDP----LKKKIASVFLESFLFYSGFWLP-MYFSSRGKLTNTADLIRLII 189 + + + Y D P + ++ +E L SG++ + G I + Sbjct: 140 PEAMNRLYTDDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLN 199 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 DE H + Y Q+ + + +DL +QY DEL+ Sbjct: 200 MDEGRHIQFGLYTIQRLVNEN---------ERYYDLF-------IQYMDELWP------H 237 Query: 250 VKAFLCYN--ANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 V ++ Y K L + +N ++ + + Sbjct: 238 VVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQI 283 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 16/220 (7%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 + +N+W + D+ + L Q+ + F L + D + + Sbjct: 48 HYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAVMQFIDENDLE 107 Query: 81 DALTPHEEAVLSNISFMEAVHARSYSSI---------FSTLCQTKDVDAAYAWSEENAPL 131 + + E +H Y+ + F+T T Y + Sbjct: 108 WEECTQW--MFKDQGARETIHKIVYNKMLHLADHSSEFTTSMLTSKKYINYILHNNSDLK 165 Query: 132 QRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 +K ++ + + L K I F E +LF + F + G L N + +++D Sbjct: 166 LQKYKLEDEVMKKAAFLIKMI---FCERYLFATPFLVINLMGESGFLNNCVRINMQVMKD 222 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYD 231 E VH + ++ K Q +E+ FD+ E + Sbjct: 223 EHVHYLHAVQLFRDL--KPKSDQIDEINKLFFDMAQEFVE 260 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 39/281 (13%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 ++ + W P + + D A L+ VE + + A Sbjct: 24 NEHPKRLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDLA 83 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA--------AYAWSEE 127 P L E+ ++ + EA H + + + + ++ A WS + Sbjct: 84 P-LAVVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEPMADRWSHD 142 Query: 128 N--APLQRKAQIIQQHYRGDDPLKKKIASV----FLESFLF----------YSGFWLPMY 171 + R + + + D + A +E L YSG Sbjct: 143 DYRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETRYSG-----E 197 Query: 172 FSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYD 231 + +L + R + RDE H + K +K ++K + + + EL Sbjct: 198 LEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET------IVETIDELVP 251 Query: 232 NELQYTDELYAETPWADD---VKAFLCYNANKALMNLGYEP 269 D++ + D + + ++ L +G P Sbjct: 252 LVETTIDQMVRDGSIGADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 79/231 (34%), Gaps = 23/231 (9%) Query: 19 DLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPS 77 +++ W P+++ LS D ++ L + + TG + + P Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 +M A + ++A LS E H + F+ + QT + L +A+ Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLV--HDTLDERARQ 148 Query: 138 IQQHYRGDDPLKKKIASVFLESFLFYSG-------------FWLPMYFSSRGKLTNTADL 184 + P +++IA LE + Y G F G + Sbjct: 149 LLSVLDKG-PEEREIA--MLEGLVHYQGVIEGIQAMVGYEVFEAVY--GQYGLFPGLKEG 203 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQR-EELKSFAFDLLLELYDNEL 234 + I RDE H Y + + S +R +EL +L YD E+ Sbjct: 204 FKQIKRDEGRHVGYGLRMMKYLSKNPSYAKRIKELFEEFLPKILVRYDQEI 254 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 D + ++ + A++ LM LG + ++ NP L + +FF Y Sbjct: 85 GDLMSQYIEFVADRLLMALGCKKMYNVA----NPFDWMEL-ISLQGKTNFFEKRVGDYQK 139 Query: 307 GKAVET 312 + + Sbjct: 140 ASVMSS 145 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 63/209 (30%), Gaps = 20/209 (9%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 + W P ++ L D L + + + AP L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 80 PDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYA--------WSEE--NA 129 ++ ++ + E+ H + + + ++ W E + Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEKWFNEPYDE 138 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFW-LPMYFSSR----GKLTN 180 +R + + Q D P + A +E L +G++ L + + + L Sbjct: 139 LFERNERAMVQLLEEDTPKNRAKAHCHYHLTIEGILAQTGYYGLTLAYGEQEPDLPDLPG 198 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEK 209 + ++L+ DE H + + + + Sbjct: 199 LVEGLKLVRSDEGRHVGFGMAQLKSLVID 227 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 10/112 (8%) Query: 17 DKDLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 +K E++ + W P+ L+ D W+ + EQ + +G + A Sbjct: 9 EKSYELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEEDVTRTLA 68 Query: 76 PSLMPDALTP---------HEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV 118 P +M P EE L+ + EA H +S F + T++ Sbjct: 69 PYMMALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNT 120 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 16/191 (8%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++NR S W + L+ D + L ++ + L + ++ +L Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRT-LSALAD 108 Query: 81 DALTPHEEAVLSNISFMEAVHARSY-SSIFSTLCQTKDVDAAYAW--------SEENAPL 131 A + L EA H R + S + + + + L Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDVAGIAAEQLEPHGAMGGESGFGVVYDPLL 168 Query: 132 QRKAQIIQQHYRGDDPLKKKIA----SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRL 187 R ++ R DD +A + E L +G + +LT ++ + Sbjct: 169 TRHTAAVRT--RPDDRRVWHVAVVSYHLLAEGLLAVAGLRALRALAKSCELTALSEGLAN 226 Query: 188 IIRDEAVHGYY 198 ++RDEA H + Sbjct: 227 VVRDEARHVTF 237 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 1/70 (1%) Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQR 133 + ME +H+ YS + T + + + + + E +++ Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 134 KAQIIQQHYR 143 KA Sbjct: 294 KADWALNWIG 303 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 61/213 (28%), Gaps = 22/213 (10%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + +W R W + + + D W E++ R++ Q V Sbjct: 36 YGELYSLWER---QHWAVQDLDFTQDKLDWHERFDEEER-FARMYGLSAFFIGEQRVAAE 91 Query: 76 PS-LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQ-----TKDVDAAYAWSEE-- 127 LM A L EA H + +S + ++ AA + Sbjct: 92 LGPLMRAAPQEDMRLFLCTQIADEARHVAFFDRFYSEVDVLGVEGLEEKLAATSEHLNPE 151 Query: 128 -----NAPLQRKAQIIQQHYRGDDPLKK--KIASVFLESFLFYSG--FWLPMYFSSRGKL 178 + L+ + + + L + I + +E L +G F + G L Sbjct: 152 FGVLFDEMLKSRVDRLATEPEDLETLVEAITIYHMVIEGMLALTGQHFIIDYN-EREGTL 210 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 + + RDE H + + Sbjct: 211 PGFVEGFINVARDEHRHVAFGARFLRDMARSDP 243 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 95/305 (31%), Gaps = 47/305 (15%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT--LQN 71 I + ++ + +FW E + D + F +D L Sbjct: 30 IKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDEKLLDYIEMAFAKRIYIDNTCLDT 89 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP- 130 V+ L+ P S ME ++ + + + + K+ E+ Sbjct: 90 VLLTCELLGQVQVPEARGYFSFTMCMENIYKELFMNYVEMIRKNKEKIERTDEVEKKDEN 149 Query: 131 --------------LQRK----------AQIIQQHYRGDDPLKKKIASVFLESFLFYSGF 166 L++K +++ Y D +K+ + +F S Sbjct: 150 NLNSKISKEEYEYNLEKKLNELEDFTKMKELVGNFYDEDTLFSEKLIYYVIIKKIFSSSI 209 Query: 167 WLP-MYFSSRG-----KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKS 220 L + FS R T D + I RDE + + K S Q Sbjct: 210 HLLRLSFSMRNISESELPTQLCDGLDRIRRDEQYQVEFCLSIAKSMKTKPSNDQ------ 263 Query: 221 FAFDLLLELYDNELQYTDELYAETPWA---DDVKAFLCYNANKALMNLGYEPLFPAEMAE 277 +LL + E + + +D+ AFL +NA++ L++L +P + Sbjct: 264 -VVNLLEQAIMLEKNFIFSIVDPQVLQIEREDIVAFLLFNADEILVDL----KYPRQFNV 318 Query: 278 VNPAI 282 NP I Sbjct: 319 SNPFI 323 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%) Query: 23 WNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMR 58 + + ++FW E++ L D+ W+TLT EQ Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKN 36 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 229 LYDNELQYTDELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA 285 + E ++ + A+ + ++ + A++ L+ LGY ++ + NP Sbjct: 38 AVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA----NPFDWMT 93 Query: 286 LSPNADENHDFFSGSG 301 + +FF Sbjct: 94 -MISLQGKTNFFEKRV 108 >UniRef50_Q93L72 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Bacillus sp. BSG40 RepID=Q93L72_9BACI Length = 46 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 22/37 (59%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDI 42 +A NW+K DD +N+ FWLPE++ L+ D+ Sbjct: 8 YTAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDL 44 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVV-EQQLTMRVFTGLTLLDTLQN 71 +IS + W R W ++ + D WQ E++ + ++ + Sbjct: 9 QISYEDLYARWERGN---WRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVA 65 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 +P + A ++ L+ EA HA + +C D A + L Sbjct: 66 DNLSP-YIDAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVCDVGDGTMAGGLAAIQPDL 124 Query: 132 Q-RKAQIIQQHYRGDDPLKK-----------KIASVFLESFLFYSGFWLPM-YFSSRGKL 178 ++ + D L++ + + +E+ L SG Y R L Sbjct: 125 TWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHFITGYLEQRDVL 184 Query: 179 TNTADLIRLIIRDEAVH-GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 +R + DE H G+ + Y + E K +LL E+ L + Sbjct: 185 PGFYGGMRNVEFDEQRHIGFGVKLLYDL------QREDPECKEAVAELLREV----LPWA 234 Query: 238 DELYAETPWADD 249 ++ W + Sbjct: 235 LAVFVPPGWDER 246 >UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Proteobacteria RepID=B4R8K9_PHEZH Length = 367 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 18/191 (9%) Query: 41 DIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD----ALTPHEEAVLSNISF 96 D P W+ L+ ++ MR T TL L GA + A T + ++ +F Sbjct: 96 DHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTF 155 Query: 97 MEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVF 156 EA H + + + N L+ + R D LK + Sbjct: 156 DEARHVEVFHRYLM--------ERCHMIYPINPNLKFLLDKVLTDERWD--LKFIGMQIL 205 Query: 157 LESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE 216 +E + F + L ++ L++RDE H + + + + + E Sbjct: 206 IEGLAL-AAFQTIHETTPDPLLK---QVVGLVMRDEGRHVAFGVNYLEDWIRALPQAEIE 261 Query: 217 ELKSFAFDLLL 227 E FA++ + Sbjct: 262 ERAQFAYEACV 272 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 18/193 (9%) Query: 43 PAWQTLTVVEQQLTMRVFT---GLTLLDTLQNVIG-APSLMPDALTPHEEAVLSNISFME 98 P W + E+ R L Q + + ++ + + + E Sbjct: 80 PVWDKMNDRERDEVRRHLASWQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDE 139 Query: 99 AVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLE 158 A H Y+ + + Y N L KA + Q + V +E Sbjct: 140 ARHVEVYARFLH-----EKLGLVYPI---NDHL--KALLDQTLSDSRWDIPYLGMQVLIE 189 Query: 159 SFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL 218 L ++ +++DEA H + + ++S +R E Sbjct: 190 GLAL----AAFGVLRDLTPLPLPKQVLAYVMQDEARHVAFGRLALRDYYRQLSDAERAER 245 Query: 219 KSFAFDLLLELYD 231 + FA + +Y+ Sbjct: 246 EEFAAEGCYLMYE 258 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%) Query: 167 WLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 205 + +++ RG + LI RDE +H + Y+ Sbjct: 12 FCDIFWKKRGLMPGLTFSNELISRDEGLHCDFACLLYKN 50 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVE 52 I E++ + ++FW E+V LS D+ W+ LT E Sbjct: 23 IRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 58/193 (30%), Gaps = 30/193 (15%) Query: 45 WQTLTVVEQ---QLTMRVFTGLTLLDTLQNVIG-APSLMPDALTPHEEAVLSNISFMEAV 100 W + ++ +L + L Q + + ++ + + + EA Sbjct: 82 WDRMDARQRQEVRLHGAAWQFSQFLHGEQGAMICSARIVESVPDLDSKFYAATQTMDEAR 141 Query: 101 HARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF 160 HA +Y+ + N L KA + + V +E Sbjct: 142 HAETYARFL--------QEKVGLAYPINEHL--KALLDNTLSDSRWDMPYLGMQVLIEG- 190 Query: 161 LFYSGFWLPMYFSSRGKLTNTA------DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQ 214 + ++ G + + ++ +++DEA H + + +++ + Sbjct: 191 ---------LALAAFGVMRDITTKPLPKQILAYVMQDEARHVAFGRMALRDYYSQLTETE 241 Query: 215 REELKSFAFDLLL 227 E + F + Sbjct: 242 LREREDFVIEGCY 254 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 328 2e-88 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 306 8e-82 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 303 5e-81 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 303 8e-81 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 292 1e-77 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 289 1e-76 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 288 2e-76 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 287 3e-76 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 284 2e-75 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 282 1e-74 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 282 1e-74 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 282 1e-74 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 281 2e-74 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 281 3e-74 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 280 5e-74 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 278 2e-73 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 278 3e-73 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 276 7e-73 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 276 8e-73 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 275 1e-72 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 272 1e-71 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 271 2e-71 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 271 3e-71 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 270 4e-71 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 269 8e-71 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 268 2e-70 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 267 3e-70 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 267 4e-70 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 264 2e-69 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 264 2e-69 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 263 5e-69 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 263 7e-69 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 262 1e-68 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 261 2e-68 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 260 6e-68 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 259 8e-68 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 258 2e-67 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 257 2e-67 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 256 5e-67 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 255 1e-66 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 254 3e-66 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 252 1e-65 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 251 3e-65 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 248 2e-64 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 246 6e-64 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 246 1e-63 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 245 2e-63 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 244 3e-63 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 243 7e-63 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 242 2e-62 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 240 6e-62 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 239 7e-62 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 233 8e-60 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 232 1e-59 UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 232 2e-59 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 232 2e-59 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 231 4e-59 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 229 1e-58 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 228 2e-58 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 226 1e-57 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 225 2e-57 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 225 2e-57 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 225 2e-57 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 224 4e-57 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 222 1e-56 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 221 4e-56 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 217 4e-55 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 216 9e-55 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 215 1e-54 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 215 1e-54 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 215 2e-54 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 214 3e-54 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 214 4e-54 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 207 3e-52 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 205 1e-51 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 201 2e-50 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 196 7e-49 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 196 8e-49 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 196 9e-49 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 196 1e-48 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 193 6e-48 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 193 8e-48 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 192 2e-47 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 191 3e-47 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 191 3e-47 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 190 4e-47 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 189 1e-46 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 187 7e-46 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 186 7e-46 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 184 3e-45 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 183 7e-45 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 182 1e-44 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 180 4e-44 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 179 9e-44 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 179 2e-43 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 174 5e-42 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 173 6e-42 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 172 2e-41 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 168 1e-40 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 163 6e-39 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 162 2e-38 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 162 2e-38 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 161 4e-38 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 157 4e-37 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 157 5e-37 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 154 4e-36 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 153 6e-36 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 152 2e-35 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 152 2e-35 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 150 7e-35 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 147 6e-34 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 144 4e-33 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 143 6e-33 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 142 1e-32 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 141 4e-32 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 138 2e-31 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 136 1e-30 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 131 3e-29 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 130 5e-29 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 130 7e-29 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 126 9e-28 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 126 9e-28 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 123 9e-27 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 120 9e-26 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 118 2e-25 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 118 3e-25 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 118 3e-25 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 117 5e-25 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 116 1e-24 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 116 1e-24 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 114 4e-24 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 113 7e-24 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 108 4e-22 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 104 4e-21 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 104 5e-21 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 92 3e-17 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 85 3e-15 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 82 2e-14 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 81 4e-14 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 67 9e-10 Sequences not found previously or not previously below threshold: UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 92 2e-17 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 92 3e-17 UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 84 5e-15 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 82 2e-14 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 67 6e-10 UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax... 67 6e-10 UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesioc... 64 8e-09 UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinis... 62 3e-08 UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangi... 60 9e-08 UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain ... 60 1e-07 UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovo... 60 1e-07 UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkho... 59 2e-07 UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia... 58 4e-07 UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia... 57 1e-06 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 56 2e-06 UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliang... 54 6e-06 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 53 1e-05 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 53 1e-05 UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinos... 52 3e-05 UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_... 49 2e-04 UniRef50_Q9DW12 PxORF18 peptide n=1 Tax=Plutella xylostella gran... 48 5e-04 UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteri... 48 6e-04 UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylo... 47 7e-04 UniRef50_C7PXD9 Putative uncharacterized protein n=1 Tax=Catenul... 47 0.001 UniRef50_D1RDH0 Putative uncharacterized protein n=1 Tax=Legione... 46 0.002 UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=... 45 0.005 UniRef50_B5HTX4 Putative uncharacterized protein n=1 Tax=Strepto... 44 0.007 UniRef50_A3EVH1 Putative uncharacterized protein n=2 Tax=Leptosp... 44 0.008 UniRef50_Q7VG12 Putative uncharacterized protein n=6 Tax=Bacteri... 44 0.008 UniRef50_B5HTB5 Putative uncharacterized protein n=1 Tax=Strepto... 43 0.011 UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteob... 43 0.011 UniRef50_B1Z3F5 Phenylacetic acid catabolic family protein n=3 T... 43 0.018 UniRef50_A4YGC3 Putative uncharacterized protein n=1 Tax=Metallo... 42 0.022 UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein p... 42 0.028 UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q... 41 0.043 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 41 0.044 UniRef50_A4ZRB5 Gp34 n=2 Tax=unassigned Autographivirinae RepID=... 41 0.047 UniRef50_Q1AUS3 Putative uncharacterized protein n=1 Tax=Rubroba... 40 0.087 UniRef50_B6VMD5 Putative uncharacterized protein n=2 Tax=Photorh... 40 0.095 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 328 bits (840), Expect = 2e-88, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 109/313 (34%), Gaps = 17/313 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 + I E + + ++FW E+V + D+ W L EQ+ V Sbjct: 175 NRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIKYVLAFFAAS 234 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS-TLCQTKDVDAAYAWS 125 D + A M D P A ME VH+ YS + + + ++ + + Sbjct: 235 DGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPEERNQLFDAI 294 Query: 126 EENAPLQRKAQIIQQHYRGDD-PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 + +KA+ + + ++ + +E F F + R + + Sbjct: 295 HTIPTVAKKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFS 354 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA-- 242 LI RDE +H + Y ++S + ++ E E ++ E + Sbjct: 355 NVLISRDEGLHCDFACCLYSHLKNRLS-------RERVLQIVDEAVQLEDEFCTEALSCE 407 Query: 243 -ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 AD ++ ++ + A++ L++LGYE + NP + + +FF Sbjct: 408 LLGMNADLMRQYIRFVADRLLVSLGYEKHYNTR----NPFDWMEM-ISLQGKANFFERRV 462 Query: 302 SSYVMGKAVETED 314 Y + + Sbjct: 463 GEYQRAGVMGGNN 475 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 306 bits (783), Expect = 8e-82, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 110/309 (35%), Gaps = 18/309 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I +++ + ++FW E+V LS DI W++L E+ V D + N Sbjct: 84 PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNE 143 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + ME +H+ YS + T + K+ + + E + Sbjct: 144 NLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCV 203 Query: 132 QRKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++KA + + ++ +A +E F F + RG + LI Sbjct: 204 KKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELIS 263 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPW 246 RDE +H + ++ + K S ++++ E ++ E Sbjct: 264 RDEGLHCDFACLMFKHLVHKPSE-------ERVREIIINAVRIEQEFLTEALPVKLIGMN 316 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 +K ++ + A++ ++ LG+ +F E NP + + + +FF Y Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFRVE----NPFDFME-NISLEGKTNFFEKRVGEYQR 371 Query: 307 GKAVETEDE 315 + + E Sbjct: 372 MGVMSSPTE 380 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 116/316 (36%), Gaps = 18/316 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTL 65 S + I D ++ + ++FW +++ LS D+ W L E+ V Sbjct: 92 SRFSLFPIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAG 151 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAW 124 D + A + P A ME +H +Y + + + KD + +A Sbjct: 152 ADGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAA 211 Query: 125 SEENAPLQRKAQIIQQHYRGD-DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTAD 183 + +++KA+ Q++ D ++ +A +E F F + RG + Sbjct: 212 HTKVPSVEKKARWAQRYIGSDASFAERLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTF 271 Query: 184 LIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE 243 LI RDE +H + Y S +R+ ++ L+ E + E + + Sbjct: 272 SNELISRDEGLHCSFACQLY-------SKLERKLSETDMHKLIGEAVEVEKGFVCDALPV 324 Query: 244 ---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 A + ++ + A++ L +LGY L+ NP + + + +FF Sbjct: 325 GLIGMNASLMSQYVEFVADRLLHDLGYRTLY----GSKNPFDWMDM-ISLEGKTNFFEKR 379 Query: 301 GSSYVMGKAVETEDED 316 Y + + +D Sbjct: 380 VGEYQKSGVMASLSDD 395 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 303 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 226/317 (71%), Positives = 271/317 (85%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + R+SAINWN + DDKD EVW+RLT NFWLPEKVP+SND+P+W TLT E+QLTMRVFTG Sbjct: 9 IDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTG 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q +GA SL+PDALTPHEEAV +NI+FME+VHA+SYSSIFSTLC T ++D A+ Sbjct: 69 LTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAF 128 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 WSEEN LQRKA+I+ ++YRGD+PLK+K+AS LESFLFYSGF+LPMY+SSR KLTNTA Sbjct: 129 RWSEENNNLQRKAKIVMEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTA 188 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 D+IRLIIRDEAVHGYYIGYK+Q+ + + +R ELK + ++LL ELYDNE++YT +LY Sbjct: 189 DMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLYD 248 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 +DVK FL YNANKALMNLGYE LFP + +VNPAIL+ALSPNADENHDFFSGSGS Sbjct: 249 RVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGS 308 Query: 303 SYVMGKAVETEDEDWNF 319 SYV+GKAV TEDEDW+F Sbjct: 309 SYVIGKAVVTEDEDWDF 325 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 113/312 (36%), Gaps = 19/312 (6%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I +++ + ++FW E+V LS D+P W L E+ + D + N Sbjct: 46 PIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNE 105 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + P +E VH+ YS + T + K + + E + Sbjct: 106 NLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYV 165 Query: 132 QRKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++KA + R ++ +A +E F F + RG + LI Sbjct: 166 KKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELIS 225 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD- 248 RDE +H + +Q + K S +++++ E ++ E Sbjct: 226 RDEGLHCDFACLMFQYLVNKPSE-------ERVREIIVDAVKIEQEFLTEALPVGLIGMN 278 Query: 249 --DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 +K ++ + A++ L+ LG+ +F AE NP + + + +FF S Y Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQAE----NPFDFME-NISLEGKTNFFEKRVSEYQR 333 Query: 307 -GKAVETEDEDW 317 ET D + Sbjct: 334 FAVMAETTDNVF 345 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 8/319 (2%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 + A+NWN+ DD L W + FW E++PLS+D W ++ E+ + V GLTL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q +G P ++ +AVL+ +S ME +HA+SYSSIF+TL T+++DA + W Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 126 EENAPLQRKAQIIQQHYR----GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 E N LQ+KA ++ Y+ K ASVFLES+LFYSGF+ P+Y + +GK+T++ Sbjct: 121 ETNEQLQKKATLVSSWYQGIETKQQLYKAMAASVFLESYLFYSGFFYPLYLAGQGKMTSS 180 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 ++I LI+RDE++HG Y+G Q+ + + ++ +LK F LL LY+NE+ YTD LY Sbjct: 181 GEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQAQLKEEVFALLNTLYENEVVYTDNLY 240 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 + +DVKA++ YNANKALMNLG+EP FP E VNP + +S + + HDFFS G Sbjct: 241 SPIGLQEDVKAYVRYNANKALMNLGFEPYFPEE--PVNPIVFNGISTHTKQ-HDFFSKKG 297 Query: 302 SSYVMGK-AVETEDEDWNF 319 + YV + DED+ F Sbjct: 298 NGYVRTVHIEQLRDEDFVF 316 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 104/303 (34%), Gaps = 34/303 (11%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + R ++FW E++ LS+D+ W LT E+ R+ D + N Sbjct: 47 PIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFLSRILAFFASSDGIVNE 106 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + P +E VH+ +YS + T + ++ D + E + Sbjct: 107 NLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDPEERDFLFRAIETIPSI 166 Query: 132 QRKAQIIQQH--YRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 QRKA+ + ++ +A +E F F + RG L LI Sbjct: 167 QRKAEWALTWTSDKSTTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELIS 226 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 RDE +H + + ++ ++ E + E ++ Sbjct: 227 RDEGMHTDFACLLFAYLRKRPHS-------DTILAIVTEAVEIEKEF------------- 266 Query: 250 VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKA 309 ++A++ L +LG + + + NP L + + +FF S Y Sbjct: 267 ------FSADRLLTSLGNDKHYHVD----NPFDFMEL-ISMEGKANFFEKRVSDYAKANV 315 Query: 310 VET 312 T Sbjct: 316 SPT 318 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 111/306 (36%), Gaps = 18/306 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQN 71 I ++ + + ++FW E++ +D+ W +T E+ +R+ D + Sbjct: 114 PIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVG 173 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAP 130 + A S S +E VH+ +YS + T + ++ D + Sbjct: 174 ENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIPC 233 Query: 131 LQRKAQIIQQHYRGDDPLK-KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 +++KA ++ + P + + +A +E F F + RG + LI Sbjct: 234 IKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELIS 293 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPW 246 RDE +H + Y + S ++ E E Q+ + Sbjct: 294 RDEGMHTDFACLLYNHLKHRCS-------TDEVHHIVSEALVIEKQFLTDALPCALIGIN 346 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 A + ++ + A++ +++LGY ++ A NP L + +FF S+Y Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNA----TNPFDWMEL-ISLQGKANFFESRVSAYQK 401 Query: 307 GKAVET 312 T Sbjct: 402 ANVSRT 407 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 12/324 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + ++N + + + + +NFW+PE++ +S+D+ ++ L+ +E+ ++ Sbjct: 28 VGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKIL 87 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L LD++Q P++ L+ +F EAVH++SYS + T+C ++ + Sbjct: 88 SFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDTICSPEERND 146 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDD-------PLKKKIASVFLESFLFYSGFWLPMYFS 173 +++ L + + I Y LK IA+ LE FYSGF Sbjct: 147 ILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLG 206 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 K+ + IR I RDE H + Q+ ++ D++ E + E Sbjct: 207 RNNKMPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQE 266 Query: 234 LQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 +++ D + + V ++ Y N NLG+EPL+ E + NA Sbjct: 267 IKWGDYVIGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNA 326 Query: 291 D-ENHDFFSGSGSSYVMGKAVETE 313 + DFF ++Y A+ + Sbjct: 327 NLIKTDFFEAKSTAYAKSSAMVDD 350 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 12/324 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + WN+I D +++ + +NFW+PE++ L+ D+ + LT E++ ++ Sbjct: 19 IGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFPYLTDYERRAFDKII 78 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 L LD++Q+ P+L ++L+ +F E +HA+SYS I T+ D Sbjct: 79 AFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPITRDK 137 Query: 121 AYAWSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 Y + L + + I Y+ + + IA+ LE FYSGF + Sbjct: 138 IYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFYSGFSFFYTLA 197 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 +GK+T T+ + + I RDE H ++ + EL++ D++ + +NE Sbjct: 198 RQGKMTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENE 257 Query: 234 LQYTDELYAETPWAD---DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + + + ++ ++ Y AN L +G L+P I + + N+ Sbjct: 258 IAWGQYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNS 317 Query: 291 DENHDFFSGSGSSYVMGKAVETED 314 DFF ++Y A + +D Sbjct: 318 -TKTDFFEAKVTNYTKAAAFDFDD 340 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 146/316 (46%), Positives = 212/316 (67%), Gaps = 1/316 (0%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + AI+WN++ D D W +LT FWL ++P+SND+ W+TL+ E+ + +VF G Sbjct: 29 VEYYKAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGG 88 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDTLQ+ GA + T HEEAV +NI FME+VHA+SYS+IFSTL +++ + Sbjct: 89 LTLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIF 148 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 W+ N LQ KA+ I + Y+ D LK K+AS LE+FLFYSGF+ P+Y+ KL N A Sbjct: 149 EWTNNNEYLQFKAKKINEIYQSKDALKMKVASTMLETFLFYSGFFTPLYYLGNNKLANVA 208 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 ++I+LIIRDE+VHG Y GYK+Q+ ++S ++EE+K + ++L LELY NE++YT +Y Sbjct: 209 EIIKLIIRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIYD 268 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 + W + VK F+ YNANKAL NLG++PLFP +V+P ++ +S NHDFFS G+ Sbjct: 269 QVGWTEKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGIST-GTSNHDFFSQVGN 327 Query: 303 SYVMGKAVETEDEDWN 318 Y++G +DED++ Sbjct: 328 GYLLGSVEAMDDEDYS 343 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 12/326 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + S +NWN I+ + ++ +L SNFW+P+++ +S D+ W LT EQ R+ Sbjct: 21 IGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQLTEREQDAFKRII 80 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 L++LD++Q S M + + AVL+ I+ E VH +SYS + S+L + + Sbjct: 81 GLLSILDSVQTRYILESSMFSSDSS-VHAVLAVIAQQEVVHNQSYSYVLSSLVPLAEQNR 139 Query: 121 AYAWSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 + ++++ + ++ Q I Y ++ K +ASV LE FYSGF + Sbjct: 140 IFNIAKDDEMVMKRNQFILDLYEAFRETPNAENFAKSLVASVILEGINFYSGFAYFYNLA 199 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLG-QREELKSFAFDLLLELYDN 232 K+ T+ +I I RDE H Y+I + + + + + F +D + E D Sbjct: 200 RHQKMVGTSTMISYIQRDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDL 259 Query: 233 ELQYTDELYA--ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 E+++ + + + +++ ++ Y ANK L +G L+ +V P I A + Sbjct: 260 EIEWCEYVLRDLDGLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSL 319 Query: 291 D-ENHDFFSGSGSSYVMGKAVETEDE 315 + DFF SY D+ Sbjct: 320 NATKSDFFEQKSRSYAKVTDANGFDD 345 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 152/318 (47%), Positives = 208/318 (65%), Gaps = 3/318 (0%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 +++ AINWN++SD D W +LT FWL ++P++ND+ W+ L Q VF G Sbjct: 9 VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGG 68 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q+ G +L D TPHE AVL+NI FME+VHA+SYS+IFSTL + + Sbjct: 69 LTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIF 128 Query: 123 AWSEENAPLQRKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 WS+ LQ KA I Y DPLKKK+A+VFLE+FLFYSGF+ P+Y+ KL N Sbjct: 129 EWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFLFYSGFYTPLYYLGHNKLNN 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 A++I+LI+RDE+VHG YIGYK+Q + + Q++++K + ++ L ELYDNE +YT L Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 Y + W DDV F+ YNANKALMNLG +PLFP ++VNP ++ +S + NHDFFS Sbjct: 249 YDQVGWTDDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVVMNGISTST-SNHDFFSQV 307 Query: 301 GSSYVMGKAVETEDEDWN 318 G+ Y MG D D++ Sbjct: 308 GNGYRMGAVEAMNDSDYD 325 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 132/321 (41%), Gaps = 12/321 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + ++N + + + +NFW+PE++ LS D + L E+Q ++ Sbjct: 36 IGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYGELLGKERQAYDKIL 95 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L LD++Q+ P + LS +F E VH++SYS + T+C + + Sbjct: 96 SFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQSYSYMLDTICSPEKRNE 154 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGD-------DPLKKKIASVFLESFLFYSGFWLPMYFS 173 + + L ++ I + Y LK +A+ LE FYSGF S Sbjct: 155 ILYQWKTDERLLKRNTFIGELYNEFQMKKDSFTLLKVMMANYILEGIYFYSGFMFFYNLS 214 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 GK+ +A IR I RDE H + + E+ +E ++L+E + E Sbjct: 215 RNGKMPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQE 274 Query: 234 LQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + + + + + ++ Y N LG++ ++P E + NA Sbjct: 275 IAWGHYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNA 334 Query: 291 DE-NHDFFSGSGSSYVMGKAV 310 + DFF ++Y A+ Sbjct: 335 NMVKTDFFEAKSTAYAKSTAL 355 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 113/322 (35%), Gaps = 29/322 (9%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 I + + + R ++FW E++ LS DI W + E+ RV D + N Sbjct: 90 PIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAFFAASDGIVN 149 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAP 130 + + P ++ +E +H+ +YS + T + K+ + + Sbjct: 150 ENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPE 209 Query: 131 LQRKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 + KA+ + + D L ++ +A +E F F + RG + LI Sbjct: 210 IGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELI 269 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TP 245 RDE +H + + K ++ E + E +Y + Sbjct: 270 CRDEGLHTDFACLLFAHLKNKPDPAI-------VEKIVTEAVEIEQRYFLDALPVALLGM 322 Query: 246 WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 AD + ++ + A++ L+ G + + E NP + + +FF S Y Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYKVE----NPFDFME-NISLAGKTNFFEKRVSDYQ 377 Query: 306 MGKAVE----------TEDEDW 317 + T +ED+ Sbjct: 378 KAGVMSKSTKQEAGAFTFNEDF 399 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 128/324 (39%), Gaps = 12/324 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + ++N + + + + +NFW+PE++ L D+ ++ L E++ ++ Sbjct: 24 IGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLPAAERRAYDKIL 83 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L LD++Q+ P++ + L+ SF E VH++SYS + T+ + Sbjct: 84 SFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSYSYMLDTIASPDERQE 142 Query: 121 AYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFS 173 +++ L + I Y ++ L+ IA+ LE FYSGF Sbjct: 143 IIFQWKDDEHLLARNTFIGDLYNEFQQEQSRENFLRVLIANYILEGIYFYSGFMFFYNLG 202 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 G++ + IR I RDE H + + + E + +++ E E Sbjct: 203 RIGRMPGSVQEIRYINRDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQE 262 Query: 234 LQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + E ++ ++ Y N ++G L+ E + + N Sbjct: 263 IAWGKYAIGNEVEGLNEKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANP 322 Query: 291 D-ENHDFFSGSGSSYVMGKAVETE 313 + DF G ++Y A+ + Sbjct: 323 NFIKTDFIEGRSTAYAKSTALVDD 346 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 108/323 (33%), Gaps = 21/323 (6%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGL 63 S ++ + E++ + + W E+V LS D+ W+TL EQ+ + Sbjct: 79 STLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKYILAFF 138 Query: 64 TLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS-TLCQTKDVDAAY 122 D + + + + + E VH +YS + + + + Sbjct: 139 AGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSEKKELF 198 Query: 123 AWSEENAPLQRKAQIIQQHYR--GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 + +++KAQ + + ++ A +E F F + RG + Sbjct: 199 EAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPG 258 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 LI RDE +H + ++ + ++ E D E + + Sbjct: 259 LCFSNELISRDEGLHQEFAVELFKTLRNRPG-------VDTIHAIVREAVDIEKGFILDA 311 Query: 241 YA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 ++ + ++ Y +++ L +G ++ ++ NP + + D +FF Sbjct: 312 LPCNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSK----NPFDFME-NISLDGKTNFF 366 Query: 298 SGSGSSYVM---GKAVETEDEDW 317 Y DE++ Sbjct: 367 EKRVGDYGKLDDDTDEIGFDEEF 389 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 276 bits (706), Expect = 7e-73, Method: Composition-based stats. Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 7/315 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRGDDPLK----KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 ++I LI+RDE++HG YIG Q+ + ++ L+ + +L L +NE++YT+ +Y Sbjct: 190 EIISLILRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYR 249 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E+ +V FL YNAN+AL NLG+E L+ + +NP +L LS + HDFFS G+ Sbjct: 250 ESGLEKEVVNFLKYNANRALENLGFEKLYTVDA--INPIVLNGLSTET-KTHDFFSTKGN 306 Query: 303 SYVMGKAVETEDEDW 317 Y G E EDED+ Sbjct: 307 GYQKGVYEELEDEDF 321 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 118/329 (35%), Gaps = 26/329 (7%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTG 62 E + +N W+P+++ +S DI W+ LT E+++ R Sbjct: 80 TDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGF 139 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 D+L P L +F EA+H +Y I +L D + Sbjct: 140 FVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLG--LDEGEIF 197 Query: 123 AWSEENAPLQRKAQII--------------QQHYRGDDPLKKK-IASVFLESFLFYSGFW 167 E ++ K + + LK + + +E FY GF Sbjct: 198 NAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVGFT 257 Query: 168 LPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLL 227 + + K+T A+ + I+RDE++H + + + E ++ +L Sbjct: 258 QILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFK 317 Query: 228 ELYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA 284 + + E +Y ++ A K++L + +N+ +G +PLFP E NP Sbjct: 318 QAVELEYRYAEDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEE---NPFPWM 374 Query: 285 ALSPNADENHDFFSGSGSSYVMGKAVETE 313 + + + +FF Y G A+ E Sbjct: 375 SEMIDLKKERNFFETRVIEYQTGGALSWE 403 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 135/324 (41%), Gaps = 12/324 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + I N I + +++ + +NFW+PE++PL++D + L+ E++ +V Sbjct: 47 IGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLLSDDERRSYNKVL 106 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L +D+L P++ P L+ +F EAVH++SY + ++ D Sbjct: 107 SFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYVLDSVVNPATRDQ 165 Query: 121 AYAWSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 Y + L R+ Q I + + +K +A+ LE FY+GF Sbjct: 166 IYNEWRNDDHLLRRNQFITDLFEEFIENPTDRNLMKTIVANYILEGVYFYAGFGFFFVLG 225 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 +GK+ T I+ I RDE H Y + + + +++ +++ +E Sbjct: 226 RQGKMLGTVSEIKFIQRDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHE 285 Query: 234 LQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + + + A++ Y AN L +L L+P P + + + N+ Sbjct: 286 IAWGQYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINS 345 Query: 291 DENHDFFSGSGSSYVMGKAVETED 314 DFF ++Y + +D Sbjct: 346 H-KTDFFEQRVTNYTKAGNLNWDD 368 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 125/324 (38%), Gaps = 10/324 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + +NWN I + L++NFW+P++V + D + L+ E+ + Sbjct: 26 INGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGELSAREKNAYDAII 85 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 L LD+ Q ++ P A + I E +H SYS + +++ + + Sbjct: 86 GLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITDLANQNR 144 Query: 121 AYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFS 173 + + + + ++ I Q Y + L I S LE FYSGF Sbjct: 145 VFEIARTHPTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLV 204 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 + ++T T +I I RDE H +I + + + Q + L + + E Sbjct: 205 RQNRMTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELE 264 Query: 234 LQYTDELYA--ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD 291 Q+T E+ + +++ ++ Y ANK LG E L+ V P I A + Sbjct: 265 TQWTGEVLNGIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTE 324 Query: 292 ENHDFFSGSGSSYVMGKAVETEDE 315 DFF +SY D+ Sbjct: 325 TKTDFFEMRNASYKKTNVDNCFDD 348 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 136/321 (42%), Positives = 196/321 (61%), Gaps = 10/321 (3%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 A NW+K DD +N+ FWLPE++ L+ D+ W+ L EQ M+V GLTL Sbjct: 5 YDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTL 64 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEA-VHARSYSSIFSTLCQTKDVDAAYAW 124 LDT Q G P + +AVL+ ++ ME VHA+SYS+IF TL T+ ++ + W Sbjct: 65 LDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEW 124 Query: 125 SEENAPLQRKAQIIQQHY------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL 178 ++N LQ+KAQ+I Y K +ASV+LESFLFYSGF+ P+YF +GKL Sbjct: 125 VKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKL 184 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 + ++I LI+RDEA+HG Y+G Q+ K + ++ EL+ FA DLL +LY+NEL+YT+ Sbjct: 185 MQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTE 244 Query: 239 ELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFS 298 +LY + + DVK F+ YNANKALMNLG++P F E ++NP +L L+ ++HDFFS Sbjct: 245 DLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEE--DINPIVLNGLNT-KTKSHDFFS 301 Query: 299 GSGSSYVMGKAVETEDEDWNF 319 G+ Y +D+D+ F Sbjct: 302 MKGNGYKKATVEPLKDDDFYF 322 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 136/325 (41%), Gaps = 15/325 (4%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + + + + + ++ + + NFW+PE+VPL +D + LT EQ R+ Sbjct: 25 IGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELTADEQWAYDRML 84 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + + +D++ V P+L+ P LS +F EA+H++SY + ++ + Sbjct: 85 SFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSKSYGYVLESVVPAERRQY 143 Query: 121 AYAWSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 Y E+ L + + I ++ + ++ +A LE FYSGF + Sbjct: 144 IYDLWREDRQLLERNRYIANTFQLFADNPTDEHFVRACMAQYVLEGIYFYSGFAFFYALA 203 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 GK+ TA I+ I RDE H ++ +L + ++ + ++E Sbjct: 204 RMGKMKGTATEIQFINRDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHE 263 Query: 234 LQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + + + ++ ++ + A++ LG+EPL+ NP N Sbjct: 264 MAWAAYCVGNRIQGLSGEVLQGYVKHLADQRARALGFEPLY---GNHPNPIKWVESFSNL 320 Query: 291 DE-NHDFFSGSGSSYVMGKAVETED 314 ++ DFF ++Y ++ +D Sbjct: 321 NQTKADFFETRVTNYAKSTNIDLDD 345 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 161/317 (50%), Positives = 217/317 (68%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + ++NWN + D+KDLEVWNR+ NFWLPEK+P+SNDIP+W+ L+ Q L + FTG Sbjct: 24 QGNLRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTFTG 83 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LTLLDT+Q IG + ALT HE+ + +N +FM VHARSY +IFSTLC ++ ++AA+ Sbjct: 84 LTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINAAH 143 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 W LQ++A+ + +Y G+DPLK K+A+ + FL Y GF+LP Y SSR +L NT+ Sbjct: 144 EWVVNTESLQKRAKALIPYYTGNDPLKSKVAAALMPGFLLYGGFYLPFYLSSRKQLPNTS 203 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 D+IRLI+RD+ +H YY GYKYQ+ +EK+ L +++E+K+F F+L+ L + E Y ELY Sbjct: 204 DIIRLILRDKVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYLKELYE 263 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 DD F YNA K L NLGY+ F A + P I A LS ADENHDFFSG+GS Sbjct: 264 GFGIVDDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGS 323 Query: 303 SYVMGKAVETEDEDWNF 319 SYVMG + ET D+DWNF Sbjct: 324 SYVMGVSEETNDDDWNF 340 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 12/325 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + + +NW+ + ++ + +NFW P ++ +S+D + TLT EQ+ ++ Sbjct: 22 LNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKII 81 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 L LD++Q A++S +SF E VH +SYS + S+L D Sbjct: 82 GLLAFLDSVQTDYSM-RAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDE 140 Query: 121 AYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFS 173 + + + + L+ + + I Y L+ + V LE FYSGF + Sbjct: 141 IFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLA 200 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNE 233 K+ +T+ +I I RDE +H Y +++ + + EE K+F L++ D E Sbjct: 201 RNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLE 260 Query: 234 LQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 + + + +D++ ++ + ANK + LG E +P I A N+ Sbjct: 261 KDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNS 320 Query: 291 DENHDFFSGSGSSYVMGKAVETEDE 315 DFF Y A DE Sbjct: 321 -GKSDFFEQKSRQYAKVSADNGFDE 344 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 115/317 (36%), Positives = 168/317 (52%), Gaps = 7/317 (2%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 SA NW+++ D + + + W E++P+++D W+ L+ E+ RV GL + Sbjct: 4 SATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLNAM 63 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DTLQ +G P L +A L+ +FME VHARSYS T + A+ W E Sbjct: 64 DTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEWIE 123 Query: 127 ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 LQRK + ++ Y D L + +AS LE+ LFYSGF+ P+Y + +GK+++ ++ Sbjct: 124 MQPHLQRKITVFRRLYEEGDALTRMLASCLLETALFYSGFFYPLYLAGQGKMSHMGEVFT 183 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 LI DEA+HG Y+G +Q+ + G++ +++ L E Y+NE YTDE+YAE Sbjct: 184 LICADEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVYAEVGL 243 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS-SYV 305 A +VK F+ YN N NLG E LFP E EVNP +L + HDFFS G+ Y Sbjct: 244 ASEVKTFVRYNFNICCDNLGLERLFPEE--EVNPLVLNGIRATGGTTHDFFSIKGAGGYA 301 Query: 306 MGKAVETED----EDWN 318 A D E WN Sbjct: 302 KITAEPLTDAVVREAWN 318 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 71/326 (21%), Positives = 133/326 (40%), Gaps = 19/326 (5%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + + NKI + + +N W PE+V ++ D + LT+ E+Q R Sbjct: 34 GNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELTLQEKQGYDRALAQ 93 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 L +D+LQ ++ P P +L +F E++HA+SY+ + ++ + + D Y Sbjct: 94 LIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMVDSI--SANTDEIY 151 Query: 123 AWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 ++ L+ K I Y + +K A+ LE FYSGF + Sbjct: 152 QMWRKDDKLRSKNDYIADVYTDLAKNPTETNLIKAMFANQILEGIYFYSGFAFFYTLARS 211 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ N+A++IR I RDE H ++ + L+ ++ + D E Sbjct: 212 GKMQNSAEMIRFIQRDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESS 271 Query: 236 YTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN-AD 291 + + + A ++ ++ Y A+K L + Y L+ NP N + Sbjct: 272 WGEYITQGQILGLTAKIIRQYIEYLADKRLKAVDYPILYN----TQNPIQWVDEQVNFNN 327 Query: 292 ENHDFFSGSGSSYVMGKAVETEDEDW 317 + +FF +Y G+ ++D+ Sbjct: 328 QRTNFFEAKVRNYTRGELK--FEDDF 351 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 106/307 (34%), Gaps = 16/307 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + E++ + + FW E++ D W+ LT E+ +++ D + Sbjct: 71 PIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFFASSDGIVIE 130 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 L A P + ME++H Y + L KD + ++ + Sbjct: 131 NLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILFNAAQHFPAI 190 Query: 132 QRKAQIIQQHYRGDDPLKKK-IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 ++K Q + ++ L + +A +E F F + +RG L I R Sbjct: 191 KKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISR 250 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWA 247 DE +H + +K + +++ E E ++ Sbjct: 251 DEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMNC 304 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 + ++ + A+K L+ +G E + NP + + + +FF + Y Sbjct: 305 KLMSQYIEFVADKLLVEMGLEKHYNV----TNPFPFMD-NISLENKTNFFEKRVAEYQRA 359 Query: 308 KAVETED 314 + + + + Sbjct: 360 QVMASIN 366 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 124/329 (37%), Gaps = 26/329 (7%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFT 61 +++ I E + +N WLP ++P+ DI W++ L+ E+++ + Sbjct: 24 NQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLG 83 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 + ++L ++ P L +F EAVH ++ I +L + Sbjct: 84 FFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEK--EI 141 Query: 122 YAWSEENAPLQRKAQIIQQHYRG--------------DDPLKKKI-ASVFLESFLFYSGF 166 + E A ++ K + + +K + + +E FYSGF Sbjct: 142 FNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGF 201 Query: 167 WLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLL 226 + + F + K+ + + I+RDE +H + E+ EL+ +L+ Sbjct: 202 VMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELI 261 Query: 227 LELYDNELQYTDELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL 283 D E++Y + A ++ + A++ L +G +P++ + NP Sbjct: 262 KRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTK----NPFPW 317 Query: 284 AALSPNADENHDFFSGSGSSYVMGKAVET 312 + + + ++ +FF Y ++ Sbjct: 318 MSETIDLNKEKNFFETRVIEYQHAASLTW 346 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 130/324 (40%), Gaps = 19/324 (5%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + S + NKI +W + +N W E+V +++D + L+ E+ R Sbjct: 25 GNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQ 84 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 L +D+LQ ++ P +P L ++ EA+H+ +Y+ + ++ + + + Y Sbjct: 85 LIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESI--SANTEEIY 142 Query: 123 AWSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 + L+ K I Q Y ++ LK A+ LE FYSGF + Sbjct: 143 DMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARS 202 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ +A +IR I RDE H + + +L + ++ + + E Sbjct: 203 GKMLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEAS 262 Query: 236 YTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA-LSPNAD 291 + D + + ++ ++ + A+ L +G ++ + +P S + Sbjct: 263 WGDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQ----HPIKWVESFSSFNE 318 Query: 292 ENHDFFSGSGSSYVMGKAVETEDE 315 + +FF S+Y G + D+ Sbjct: 319 QRSNFFEARVSNYAKGSV--SFDD 340 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 123/318 (38%), Gaps = 11/318 (3%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 +NWN I +++ L N W+ +++P++ D + L EQ+ + L +LD Sbjct: 26 ILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDAQQFALLDPEEQRTFKINISLLAVLD 85 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 ++Q + + EA+ + I E VH +SYS + S++ ++ + + + Sbjct: 86 SMQTM-FVGDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSSIVSEQEQKEIFEYWKH 144 Query: 128 NAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 + L + + I Y+ + +A + LE FYS F + K+ Sbjct: 145 DPVLLDRNKFIANIYQNFRDEPTPQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMG 204 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 T+ +I I RDE H Y+ +++ + +E +A+ + + E + Sbjct: 205 TSQMISYIQRDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYT 264 Query: 241 YA--ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHDFF 297 +++ ++ Y ANK L +G E + P I + DFF Sbjct: 265 LKNVPGIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFF 324 Query: 298 SGSGSSYVMGKAVETEDE 315 +Y D+ Sbjct: 325 EAKSRNYGKVGDDNGFDD 342 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 71/326 (21%), Positives = 139/326 (42%), Gaps = 13/326 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 + +NWN I +++ L NFW P ++ +S+DI W L+ E+ + + Sbjct: 21 INGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDIKQWHALSERERDAFLHII 80 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 L++LD++Q ++ P +A+ S I E VH +SYS + +++ + + Sbjct: 81 GLLSILDSVQP-NFIGAMKEYITDPSVKAIFSIIEQQEVVHNQSYSYVLASIEKLSEQHR 139 Query: 121 AYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFS 173 A+ + N + ++ + + + Y + + +AS+ LE FYSGF + Sbjct: 140 AFEMARTNPHIYKRNEHVIRVYEAFREQPTVETFCRALVASLVLEGINFYSGFAFFYNLA 199 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLG-QREELKSFAFDLLLELYDN 232 K+ T+ +I I +DE H Y+I + + + + ++ +D + E Sbjct: 200 RNQKMLKTSTMISYINKDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRY 259 Query: 233 ELQYTDELYA--ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 E +++ + + +++ ++ Y NK L LG + + A+ P I N Sbjct: 260 ETEWSRFVLRDIDGIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENS-MPWIRVFSDENV 318 Query: 291 D-ENHDFFSGSGSSYVMGKAVETEDE 315 + DFF SY V DE Sbjct: 319 NLGKTDFFEARPRSYTKTTDVNGFDE 344 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 122/312 (39%), Gaps = 8/312 (2%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTL 69 + S + W+ WLPE+VPL++DI W+ LT E+ L ++F T D Sbjct: 25 YKPFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIE 84 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 N + +LS S ME +H +YS + T+ + A+ + Sbjct: 85 VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIGMPETEYQAFMKYKAMK 144 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 Q + + + F E ++ F + + F K+ +I + Sbjct: 145 DKYDYMQRFNVDNKEEIATTLAVFGAFTEGVQLFASFAILLNFPRYNKMKGMGQIITWSV 204 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA----ETP 245 RDE +H I ++ +++ E+LKS ++ + E + D + E Sbjct: 205 RDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGL 264 Query: 246 WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 A DVK ++ Y A++ L+ LG + + + E NP N E+ +FF + Y Sbjct: 265 EARDVKKYIRYIADRRLLQLGLKENY---LIEQNPLTWLDQILNGVEHTNFFENRVTEYT 321 Query: 306 MGKAVETEDEDW 317 + DE + Sbjct: 322 RSATTGSWDEVF 333 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 133/328 (40%), Gaps = 20/328 (6%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + + + N + + + ++ ++ NFW+P+++ ++ D+ + LT E+ + + Sbjct: 34 GNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSY 93 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LT LD++Q P L P ++ E +H +SY + T+ T+ D Y Sbjct: 94 LTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSYQYMIETIIPTEKRDKVY 152 Query: 123 AWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 + + L+ + + I Y+ ++ +A LE FY+GF +SR Sbjct: 153 EFWRTDRVLKERCEYIAMLYQKYVDHPTQENYFIALMADYLLEGLYFYNGFIYFYNLASR 212 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 + +AD+ ++I RDE H + M+ + +++ + + E + Sbjct: 213 MLMPGSADIFKMINRDELSHVRLYQKLIPEAMQVFTHST-----DQIYEMFDKAVEFECR 267 Query: 236 YTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA----ILAALSP 288 +T+ + + + Y AN L +G +PL+ +P + Sbjct: 268 WTNHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKK 327 Query: 289 NADENHDFFSGSGSSYVMGKAVETEDED 316 A +FF + +SYVM V DE Sbjct: 328 EAHTKANFFEATVTSYVMSSGVSGWDEI 355 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 102/304 (33%), Gaps = 18/304 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 + +++ + T+ FW+ E++ LS D W+ + E+ V LD + Sbjct: 114 EHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFFASLDQIVME 173 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + + + P + EAVH SYS + T T++ + + Sbjct: 174 NIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPII 233 Query: 132 QRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++KA ++ + ++ + LE F F + R K + LI Sbjct: 234 EKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIA 293 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPW 246 RDE +H Y+ ++ + ++ E ++ Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 + ++ + A+ L LGY+ ++ NP + + +FF + Y Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA----NPFEWMDM-ISLQGKTNFFENRVAEYSK 401 Query: 307 GKAV 310 + Sbjct: 402 PGVL 405 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 194/320 (60%), Gaps = 11/320 (3%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTL 65 A+NWNK + + W++ W PE++ +S DI W++ Q +VF GLTL Sbjct: 2 YEAVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTL 59 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 LDT+Q IG + E+AVL+ EA+HA+SYS IF+TLC +++D + W Sbjct: 60 LDTVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWV 119 Query: 126 EENAPLQRKAQIIQQHYRG------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 ++N LQ KA I Y + K +SV LESFLFYSGF+ P+Y +G L Sbjct: 120 KKNEYLQYKANKIADIYNSIEEGDAESLWKAMFSSVMLESFLFYSGFFYPLYLGGQGFLR 179 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDE 239 N+A++I LI+RDE++HG +G+ Q ++ S ++E L+ + ++LLL+LY NE++YT++ Sbjct: 180 NSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQEALQLWGYELLLDLYQNEMKYTED 239 Query: 240 LYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 +YAET + +VKA++ YNANKALMN+G+E +FP E EVNP ++ + N +DFFS Sbjct: 240 IYAETGLSPEVKAYVRYNANKALMNVGFEAMFPEE--EVNPIVMNGIR-NEGSTYDFFSQ 296 Query: 300 SGSSYVMGKAVETEDEDWNF 319 G++Y K D+ +NF Sbjct: 297 KGATYAKAKVAPITDDTFNF 316 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 123/324 (37%), Gaps = 24/324 (7%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 + + + N W E+V L +D+ L+ E+ L R+ DT+ Sbjct: 32 PMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLVAFFATGDTIVAN 91 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK-DVDAAYAWSEENAPL 131 +L +P LS F EAVH + Y ++ T + + AA+A E + Sbjct: 92 NLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVENIPSI 151 Query: 132 QRKAQIIQQHYRG--------------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGK 177 RKA+ + L + +E FY F + SRG Sbjct: 152 ARKAEFCFRWIDSIFELRELRTQADRRAFLLNLICFAACIEGLFFYGAFAYVYFLRSRGL 211 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 L A + RDE++H + + +L+ +++ E D E+Q+ Sbjct: 212 LNGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFA 271 Query: 238 DELYAETPWA---DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 ++L + D++ +L + A++ L+ LG P++ NP L + E Sbjct: 272 EDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMY----GSANPFAFMELQ-DVQELS 326 Query: 295 DFFSGSGSSYVMG-KAVETEDEDW 317 +FF S+Y MG T D+D+ Sbjct: 327 NFFERRVSAYQMGVSGSVTFDDDF 350 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 26/321 (8%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDTLQ 70 I D E + + +N W PE+V + DI WQ LT E+QL + ++L Sbjct: 17 PIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLT 76 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 ++ P L ++ EAVH ++ +L D + Y + Sbjct: 77 ANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLG--FDPEHMYGMYDRIPS 134 Query: 131 LQRKAQIIQQHYRGDDPLKKKI---------------ASVFLESFLFYSGFWLPMYFSSR 175 + K + + R D I V +E FY+GF + + R Sbjct: 135 IAEKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFYVIMEGIFFYAGFAMMLALKRR 194 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ + I+RDE++H + + ++ + ++ L+ + D E Sbjct: 195 GKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQL 254 Query: 236 YTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 Y + + ++ ++ Y A++ L +P++ + NP + + Sbjct: 255 YARDACPDDLLGMSSEQFADYVEYVADRRFQQLRMDPVYGTD----NPFPWMTEQVDLNT 310 Query: 293 NHDFFSGSGSSYVMGKAVETE 313 +FF + S Y G +++ + Sbjct: 311 ETNFFERNVSEYQQGGSLDWD 331 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 121/325 (37%), Gaps = 24/325 (7%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFT 61 ++A+ +S + N W PE+VPL +D+ W L+ E++ Sbjct: 8 GDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERRAVEMFLG 67 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 +++L SL P L+ ++ EA H ++ + TL D + Sbjct: 68 FFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTL--PLDRERV 125 Query: 122 YAWSEENAPLQRKA----QIIQQHYRGDD---------PLKKKI-ASVFLESFLFYSGFW 167 + E+ + K Q+ +Q D ++ + V LE FYSGF Sbjct: 126 FGLHVEHPAVAAKELFQRQLAEQWLVTPDVESVEGLQRLVRNLVGYFVILEGIFFYSGFA 185 Query: 168 LPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLL 227 L + F R L ++ +++DE++H + + +E+ +L+L Sbjct: 186 LALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELIL 245 Query: 228 ELYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA 284 + E Y + E AD + ++ Y A++ L LG F E NP Sbjct: 246 RAVELEEAYNRAVLPEPLIGLDADVLNRYVRYIADRRLEELGLPIAF----GEPNPLRWM 301 Query: 285 ALSPNADENHDFFSGSGSSYVMGKA 309 + E +FF Y +G+A Sbjct: 302 VAQVDMPEIVNFFEARNIHYEVGRA 326 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 113/337 (33%), Gaps = 26/337 (7%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTM 57 + N + +++ + +N W PE +P+ DI W+ +T E+ + Sbjct: 29 INGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIR 88 Query: 58 RVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTK 116 + + + P + VL + E +HA S + S+L Sbjct: 89 MGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPH 148 Query: 117 DVDAAYAWSEENAPLQRKAQIIQQH------------YRGDDPLKKKIASV--FLESFLF 162 + +A + + + RK + + ++ L + + +E F Sbjct: 149 ECEAMFE---DIPTIVRKNEFVVKNSRQLRRDLDLTQPENKQLLARNMFLFGQCMEGTQF 205 Query: 163 YSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFA 222 Y F + + + K + R +RDE+ H +E+ K Sbjct: 206 YGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLMDLVEENPEIWTPGFKEEL 265 Query: 223 FDLLLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVN 279 + + E E ++ + D+ ++ Y A++ L +G P+ + N Sbjct: 266 RETMREAVTLEKEFIRDCLPVNAVGLAVDEFLTYIDYIADRRLEGVGLAPI--SATPIKN 323 Query: 280 PAILAALSPNADENHDFFSGSGSSYVMGKAVETEDED 316 P A + + +FF G + Y ++ +D Sbjct: 324 PLPWLAEMMDIKKEQNFFEGRVTEYQKASSLAVTHDD 360 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 116/315 (36%), Gaps = 14/315 (4%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDT 68 + S +++ + W+ +++ LS D+ W+ +T VE++ + T D Sbjct: 100 YKPFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDV 159 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 +P +L + + E +H R+Y+ + TL A+ E Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSEYHAF---LEY 216 Query: 129 APLQRKAQIIQQHYRGDDPLKKKIA--SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 + K + +VF E ++ F + + F GK+ ++ Sbjct: 217 KAMTDKIDFMMDANPNTRRGLGLCLAKTVFNEGVALFASFAMLLNFQRFGKMKGMGKVVE 276 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---- 242 IRDE++H ++ ++ + K + + + + E ++ D Y Sbjct: 277 WSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTI 336 Query: 243 ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 E AD+VK ++ + ++ L LG ++ + NP N ++ +FF + Sbjct: 337 EGLKADEVKEYIRHITDRRLNQLGLNEIYNIDK---NPLTWLEWILNGADHTNFFENRVT 393 Query: 303 SYVMGKAVETEDEDW 317 Y + DE + Sbjct: 394 EYEVAGLTGNWDEAY 408 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 118/325 (36%), Gaps = 25/325 (7%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 + + E++ N W E++ L +D+ L+ E+ L R+ DT+ Sbjct: 46 PMRYPQFYEMFRDAIKNTWTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVA 105 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK-DVDAAYAWSEENAP 130 +L +P LS F EAVH + Y ++ T + + A+A E Sbjct: 106 NNLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPS 165 Query: 131 LQRKAQIIQQHYRG--------------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 ++ KA+ L +E FY F + SRG Sbjct: 166 IRTKAEFCFTWIDSIENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRG 225 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 L A + RDE++H + + + E+ +L+E D E Q+ Sbjct: 226 LLNGLASGTNWVFRDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQF 285 Query: 237 TDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 ++L D++A+L A++ + LG ++ NP L + E Sbjct: 286 AEDLLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIY----GTKNPLAFMELQ-DVQEL 340 Query: 294 HDFFSGSGSSYVMGK-AVETEDEDW 317 +FF S+Y +G + DED+ Sbjct: 341 SNFFERRVSAYQVGVEGSVSFDEDF 365 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 92/265 (34%), Gaps = 14/265 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + E + S FW E+V ++ D + TLT EQ V D + N Sbjct: 40 PIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNE 99 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 + + +E +H+ YS + TL ++ + E + Sbjct: 100 NLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSI 159 Query: 132 QRKAQIIQQHYRGDDPLK-KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 ++KA Q+ D + +A +E F F + RG + LI R Sbjct: 160 RKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISR 219 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPWA 247 DE +H + ++ K ++ + D++ E E ++ E Sbjct: 220 DEGLHTDFACLLHKYINNKCTVIE---------DIVREAVAIEQEFLSESLPVSLIGMNC 270 Query: 248 DDVKAFLCYNANKALMNLGYEPLFP 272 + ++ + A++ L LG ++ Sbjct: 271 KLMCQYIEFVADRLLFALGERKIYT 295 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 108/313 (34%), Gaps = 13/313 (4%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDT 68 + ++ + W+ ++ L +D+ W++ +T E+ V T LD Sbjct: 73 FKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDV 132 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 + L +L++ + EA+H ++YS + TL A+A E Sbjct: 133 EVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYQAFADYVE- 191 Query: 129 APLQRKAQIIQQHY--RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 + K +++ + + +V E ++ F + + F GK+ ++ Sbjct: 192 --MTDKLDFMREMDCSTLPGLARSLLRAVLNEGVSLFAAFVMLLTFQRSGKMKGMGKVVE 249 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 +RDE +H + ++ + +++ + + + E + D + E Sbjct: 250 WSVRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAFQECGP 309 Query: 247 -----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSG 301 VK ++ Y N N+G L E P + + +FF Sbjct: 310 VCELEPKQVKDYVLYVINLRAANMGLPKL-IERAPEACPIPWVKWLIDGADLTNFFENHV 368 Query: 302 SSYVMGKAVETED 314 + Y G + Sbjct: 369 TEYETGGLTGSWS 381 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 12/328 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 M+ A+NWN +D W + FW+ + S DI +W +L + + V Sbjct: 1 MEKKIYEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVL 60 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 GLTLLDTLQ+ G P ++ + +VLS + ME +HA+SYS+IF+T+ T++++ Sbjct: 61 GGLTLLDTLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINE 120 Query: 121 AYAWSEENAPLQRKAQIIQQHYR--------GDDPLKKKIASVFLESFLFYSGFWLPMYF 172 + W +EN LQ KA I +Y+ D ASV+LE++LFYSGF+LP++ Sbjct: 121 TFRWVQENPHLQYKANKIDTYYQKMNNPEASKRDIAMALAASVYLETYLFYSGFFLPLWL 180 Query: 173 SSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDN 232 + +G++ + D+I+ II DE++HG ++G +Q+ S ++ ++++ L+ +LY+N Sbjct: 181 AGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYEN 240 Query: 233 ELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 E +YTDE+Y + +VK ++ YNANKALMNLG+E F VNP +L L+ + Sbjct: 241 ETRYTDEIYGDLGLTGNVKEYIRYNANKALMNLGFEEEFEV--KNVNPIVLNGLNVETTQ 298 Query: 293 NHDFFSGSGSSYVMG-KAVETEDEDWNF 319 HDFFS ++Y + V D+D+ F Sbjct: 299 -HDFFSKKSTNYEKALEVVHLHDDDFKF 325 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 120/321 (37%), Gaps = 21/321 (6%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDT 68 +N E W + W+ E+VPL D+ W + ++ E+ L ++F T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 + MP + +++ + ME +H +Y+ + +TL + +A+ + Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLGMPRTEFSAF---RDY 142 Query: 129 APLQRKAQIIQQH---YRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLI 185 A ++ KA + D + F E ++ F + + F K+ ++ Sbjct: 143 AAMRDKADYMHTFGVGTMADVSRTLAMFGAFTEGMALFASFAMLLNFPRHNKMKGMGQIV 202 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA--- 242 +RDE++H I + + + + ++ D+ + E ++ D + Sbjct: 203 TWSVRDESLHCQGIIRLFHEWNRETGAL-TKPVRDDILDVATTMVGLEEKFVDLAFELGA 261 Query: 243 -ETPWADDVKAFLCYNANKALMNLGYEPLFPA--------EMAEVNPAILAALSPNADEN 293 E A+D+K+++ Y A+ L L L+ E +P N E+ Sbjct: 262 IEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEILNGVEH 321 Query: 294 HDFFSGSGSSYVMGKAVETED 314 +FF + Y D Sbjct: 322 ANFFEQRSTEYSKAATQGAWD 342 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 118/335 (35%), Gaps = 24/335 (7%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMR 58 + R + +N + + ++ ++ +N W P+ + ++ D W T L+ E+ + Sbjct: 58 INGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWIIEM 117 Query: 59 VFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV 118 + + + + + + E++H S I +L D+ Sbjct: 118 GVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSL--NIDL 175 Query: 119 DAAYAWSEENAPLQRKAQIIQQHYRG--------DDPLKKKIASVF------LESFLFYS 164 D A + +QRK I +H K+K A +E FY+ Sbjct: 176 DEVTAKFSDIPSVQRKNAFITRHMPELKMGIDLTQTANKQKFAKAIFGITQVMEGTQFYA 235 Query: 165 GFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD 224 F + + + K+T + + +RDE+ H Y + + + E ++ + Sbjct: 236 LFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQLIAENPDIWTPEFRAELVE 295 Query: 225 LLLELYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA 281 + E + E ++ + E D ++ YNA++ L L L + NP Sbjct: 296 FMREGVELEKEFVRDCLPEDGVGMTQADFLTYVEYNADRRLAGLDLPALSGVKT---NPF 352 Query: 282 ILAALSPNADENHDFFSGSGSSYVMGKAVETEDED 316 + +FF + Y +++ ED Sbjct: 353 AWLDEVIFLRKEKNFFETRVTEYQTSGSLKNTAED 387 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 24/313 (7%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 ++ ++++++ +N W P ++ L DI ++ +T E+ + + + L Sbjct: 15 LKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITFLMSYFNPNELLV 74 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 N A + P P L+ + EA H S+ + T D +AAY + Sbjct: 75 NKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETF--PIDREAAYNSHVDIPS 132 Query: 131 LQRKAQIIQQHYR--------------GDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSR 175 + RK + + + D ++ +A +V LE FYSGF + + F R Sbjct: 133 MARKEEFEVKFIKRMTEQTLDITTTEGKKDFVRNLVAYNVILEGIWFYSGFMVSLSFRQR 192 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 L N L+ I+RDE++H + +E+ Q EE + ++L+ + E Q Sbjct: 193 NLLRNFGSLMDWIVRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQ 252 Query: 236 YTDELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 Y +L A+ + ++ Y A++ L LG+E + NPA A + + + Sbjct: 253 YNRDLLPNGILGLNANYINQYVKYLADRRLEELGFEAEYKVS----NPAKWMATANDTLQ 308 Query: 293 NHDFFSGSGSSYV 305 +FF + +SY Sbjct: 309 LVNFFESTNTSYE 321 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 125/328 (38%), Gaps = 18/328 (5%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + + IN + ++ + +N W+P+ L+ DI + T+ ++ + + Sbjct: 25 GNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNYVTMPPNMRRAFDGMLSY 84 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 LT LD+LQ + P LMP P + E VH++SY+ I T+ T D Y Sbjct: 85 LTFLDSLQTRVL-PLLMPVITAPEVSICMGEQLSQEQVHSQSYAYIIETVIPTDKRDYIY 143 Query: 123 AWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 E+ L ++ + IQ Y ++ ++ LE F+ GF L ++ Sbjct: 144 ELWREDPVLLKRCEYIQNLYDRYIHEMTMENYTISMVSDFLLEGIYFFPGFRLFYAIANE 203 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 ++ TAD+I+LI RDE H I + + + +L DL + + E++ Sbjct: 204 RYMSATADIIKLIERDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIE 260 Query: 236 YTDELYAE--TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA-----LSP 288 + + A ++ + Y N +G +F NP Sbjct: 261 WGLHIGLGVNGINATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGE 320 Query: 289 NADENHDFFSGSGSSYVMGKAVETEDED 316 ++ +FF K V+ D Sbjct: 321 DSITRDNFFESGVIYRNPAKVVDGWDSI 348 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 118/322 (36%), Positives = 178/322 (55%), Gaps = 7/322 (2%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 MK +R AINWN++++ W++ FW+ E++P+S+D W TL E+ + +V Sbjct: 1 MKQNR-EAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVL 59 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 GLTLLDT Q +G P L + VL + ME +HA+SYSSIFS+L +D Sbjct: 60 GGLTLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDH 119 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDD----PLKKKIASVFLESFLFYSGFWLPMYFSSRG 176 + W + Q K +I Y K SVFLE+FLFYSGF+ P+Y + +G Sbjct: 120 IFGWVKTYRNFQDKLDLILGKYNSIHDRMSLYKALCTSVFLETFLFYSGFFYPLYLAGQG 179 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 K+ N+ ++I LI+RDE+VHG ++G Q+ K++ ++ + A +L LY E Y Sbjct: 180 KMVNSGEIINLILRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAY 239 Query: 237 TDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 T +LY+ V F+ YNA+KALMNLG++ F +VNP +L L N + HDF Sbjct: 240 TKDLYSSIGLEGAVDVFVRYNADKALMNLGFDSAFNIRDIDVNPLVLNGLRTNT-KTHDF 298 Query: 297 FSGSGSSYVMG-KAVETEDEDW 317 FS G+ Y+ + +D+D+ Sbjct: 299 FSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 13/316 (4%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 +NWN D+ ++ L +NFW P ++ + D W +LT +EQ +RV T L LD Sbjct: 37 LLNWND-EDEIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLD 95 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 +LQ ++ + + I+ EA H SYS I S+L + + + + + Sbjct: 96 SLQVKAILE-VIRFTTNSALANISAFIAQQEATHTTSYSYITSSLVRLPVQNQYFNETMK 154 Query: 128 NAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 + L ++ +++ Y + + + S+ LE FYSGF + +S+ K+ Sbjct: 155 HPVLAKRNKLVLDVYEDFAENPSLQNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMK 214 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 ++ +I I RDE H Y+IG ++ + + +E + D L E E ++ E+ Sbjct: 215 SSTMISYIQRDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEI 274 Query: 241 YA--ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD-ENHDFF 297 A E ++ ++ Y ANK + LG + ++ E P I + D F Sbjct: 275 LADIEGLDLEEFDHYIEYLANKRVRQLGMDNIY-EERGNPMPWIQVFSDEMMEHTKTDQF 333 Query: 298 SGSGSSYVMGKAVETE 313 Y Sbjct: 334 ENKSRDYSGATKKNNF 349 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 126/316 (39%), Gaps = 24/316 (7%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 ++ +++N+ +N W P ++ L D+ + +T E + + + L Sbjct: 13 LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLV 72 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 N A + P L+ + EA H ++ + T D D AY Sbjct: 73 NKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF--PIDRDEAYRSHIHVPS 130 Query: 131 LQRKAQI--------------IQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSR 175 + RK I D ++ IA ++ LE FYSGF + + F R Sbjct: 131 MARKEAFEVAFIKRMTEQTLDITTVEGKQDFVRNLIAYNIILEGIWFYSGFMVALSFRQR 190 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 L N LI ++RDE++H + +E+ +E + D++++ + E Q Sbjct: 191 NLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQ 250 Query: 236 YTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 Y ++ AD V ++ Y A++ L LG+EP + VNPA A + + + Sbjct: 251 YNRDMLPRGILGMNADYVNDYVKYLADRRLEELGFEPEYRV----VNPAKWMATANDTLQ 306 Query: 293 NHDFFSGSGSSYVMGK 308 +FF + +SY + Sbjct: 307 VVNFFEATNTSYEVNA 322 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 107/327 (32%), Gaps = 29/327 (8%) Query: 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLT 64 E + N W P + +S D+ + LT+ E+ + V LT Sbjct: 88 TDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHVYENVLAYLT 147 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW 124 D L ++M P + + + E++H +Y T+ D Y Sbjct: 148 TSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIG--LDQSEIYNR 205 Query: 125 SEENAPLQRK----AQIIQQHYRGDDPLKK-----------KIASVFLESFLFYSGFWLP 169 + RK + I R D L+ + E FY+GF Sbjct: 206 YRVTPAIYRKIKMGNERISALLRPDINLRNRDDLETFVMAYIFFAGIFEGCWFYNGFSPI 265 Query: 170 MYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLEL 229 RG + T + ++ I+RDE +H + ++ +++ + + L E Sbjct: 266 FALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKEEGVTLDPKA---IKTLWEEA 322 Query: 230 YDNELQYTDELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA 285 E Y L E D ++ F + AN+ L + FP N Sbjct: 323 EAAETGYAHFLLKEPILGYTAEDHIEQF-RFIANRRAKQLKLDEPFPGAG---NALPWLD 378 Query: 286 LSPNADENHDFFSGSGSSYVMGKAVET 312 + + +FF + Y G +++ Sbjct: 379 EQASMRKEKNFFETRVTEYQTGASLQW 405 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 110/325 (33%), Positives = 170/325 (52%), Gaps = 14/325 (4%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 + A NW+K + L W + W E+ S D+ W+TL+ EQ+ ++ +GLT Sbjct: 6 KARATNWDK-DNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLT 64 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY-A 123 LDT Q G P L V + +S ME +H +SYS IF++L + KD Sbjct: 65 GLDTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKE 124 Query: 124 WSEENAPLQRKAQIIQQHY--------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 W N L +K ++I +Y + +S+FLESFLF+SGF+ P+Y + + Sbjct: 125 WVPANKYLNKKTKLITTNYYKLLKPNPTDREIYVAMASSIFLESFLFFSGFYYPLYLAGQ 184 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GK+ ++ ++IR II DE +HG GY Q +K S ++E+++ +L +LY NE++ Sbjct: 185 GKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEEQEDIRKELMELFDQLYFNEVE 244 Query: 236 YTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 Y LY + +DV ++ YN N+ALMNLG+E +F E NP + L + NHD Sbjct: 245 YAASLYDKLGLTEDVIRYIQYNGNRALMNLGWETVFNPE--PFNPIVENGLRTDT-TNHD 301 Query: 296 FFSGSGSSYVMG-KAVETEDEDWNF 319 FFS G Y + V D+D++F Sbjct: 302 FFSVKGDGYTLALNQVPLRDKDFDF 326 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 129/353 (36%), Gaps = 43/353 (12%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 ++ +++ D ++ + S FW PE+V +S D +Q L E+ + + Sbjct: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 TLLD++Q +L+P P E + +F E +H+RSY+ I + D + Sbjct: 81 QTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVF 138 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKK-------------------------------K 151 N +Q++A+ I +Y + Sbjct: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 Query: 152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 ++ LE+ FY F F+ R + A +IRLI RDEA+H + Sbjct: 199 MSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 Query: 212 L----GQREELKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCYNANKALM 263 EE K +DL ++ E + D L+ + D + ++ Y N + Sbjct: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 Query: 264 NLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDED 316 +G + F P I L + + SSY++G+ D D Sbjct: 319 AVGLDLPFQTRS-NPIPWINTWLVSDNVQVAP-QEVEVSSYLVGQIDSEVDTD 369 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 109/322 (33%), Gaps = 27/322 (8%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + +L S W ++V + DI W+ + +++ ++ + D + Sbjct: 23 PIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIE 82 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAPL 131 + M + + + E VH+ +YS TL K+ ++ E++ + Sbjct: 83 NLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPII 142 Query: 132 QRKAQIIQQHYRGD--DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++ AQ ++Q D ++ + +E LF + F + + + I Sbjct: 143 KKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFIS 202 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA------E 243 RDE VH + + + I + +L E + ++ + + Sbjct: 203 RDEGVHCSFACFLISNYVYNIPEEKI------IHKILKEAVELVDEFINYAFDKARGRVP 256 Query: 244 TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA-ALSPNADENHDFFSGSGS 302 + + ++ Y + + + ++ NP N E +FF + Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIY----KVGNPFPQMTKFFLNEVEKTNFFELRPT 312 Query: 303 SYVMGKAVETE-------DEDW 317 Y + D+D+ Sbjct: 313 QYQNCVKDDAFAFKLFLNDDDF 334 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 39/324 (12%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQN 71 I + + W E+ LS D W L V E+ + DT+ N Sbjct: 13 PIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVN 72 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSI-FSTLCQTKDVDAAYAWSEENAP 130 + + +E VH+ YS + F + +++ + + Sbjct: 73 INLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDC 132 Query: 131 LQRKAQIIQQHYRGD-------------------------DPLKKKIASVFLESFLFYSG 165 +++KAQ + ++ IA +E F Sbjct: 133 IKKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEGIFFSGS 192 Query: 166 FWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDL 225 F + ++G + LI RDE +H + Y + + + Sbjct: 193 FAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYI----PINEKLSPQQILSM 248 Query: 226 LLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI 282 +E D E ++ A ++ ++ + A++ L+ L F NP Sbjct: 249 FIEAVDIEKEFFTTALPCYLLGINATEMCKYIEFVADRLLVELRQPKHFN----TPNPFN 304 Query: 283 LAALSPNADENHDFFSGSGSSYVM 306 + + + +FF Y Sbjct: 305 FMT-NISLEGKTNFFERRVGEYKR 327 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 125/310 (40%), Gaps = 13/310 (4%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 + + + +R+ +N W P V +++D+ ++ L ++ + + L+ LD +Q Sbjct: 4 SPMKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQF 63 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 ++ +P LS ++ EA+H +SY++I T+ + D + Y E + L Sbjct: 64 NNINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETV--SLDPMSVYMTFERDGLL 121 Query: 132 QRKAQIIQQ-------HYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 +K Q I + + + +++V LE F+SGF + +G++ +AD+ Sbjct: 122 AQKNQFILKQSRLLGEKFSAEGFALSCVSNVLLEGVYFFSGFLSFYLLADKGEMLGSADM 181 Query: 185 IRLIIRD-EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE 243 IR I RD E H + + + + A ++ L + E+ + + Sbjct: 182 IRYIQRDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWGKYITKG 241 Query: 244 TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA-LSPNADENHDFFSGSGS 302 ++ ++ + AN + + F NP S +FF + Sbjct: 242 VTNPKAIEDYIKHLANLRAEQI--QAPFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVT 299 Query: 303 SYVMGKAVET 312 Y +G A+ Sbjct: 300 DYKVGGALVW 309 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 121/351 (34%), Gaps = 46/351 (13%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTL 69 + + + W++ + WLP +VP+ +D+ W+ L ++ +F T D Sbjct: 10 YKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVD 69 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 +P P ++ + E VH +YS + TL + Y Sbjct: 70 VASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLGMPEAT---YKEFLMYE 126 Query: 130 PLQRKAQIIQQHYRGDDPLKK-----------------KIASVFLESFLFYSGFWLPMYF 172 ++ K I++ L K + S F E +S F + + F Sbjct: 127 EMKDKQDYIKKFSDSRHILGKGEENLTTEDKEHIAAGIALFSGFTEGMQLFSTFAMLLIF 186 Query: 173 SSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE----LKSFAFDLLLE 228 G + ++ I DE H + ++ +E+ G + L+ + + E Sbjct: 187 PLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKE 246 Query: 229 LYDNELQYTDELYAE---------------------TPWADDVKAFLCYNANKALMNLGY 267 + E + D ++ + +KA++ Y A++ L +GY Sbjct: 247 MVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGY 306 Query: 268 EPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 + +F E NP + NA + +FF + Y T E WN Sbjct: 307 KSIFNLEPYPTNPLPELEIMINAPTHTNFFENRSTDYANVSTKGTWSEIWN 357 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 102/307 (33%), Gaps = 20/307 (6%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 I K + + N+W E+V L+ D+ W L+ ++ M V D + N Sbjct: 113 PIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHVLAFFAAADGIVN 172 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDAAYAWSEENAP 130 +L+ E ME H YS + +T + + + Sbjct: 173 ANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALRNKLINSIKTMPS 232 Query: 131 LQRKAQIIQQHYRGD-DPLKKKIASVFLESFLFYSGFWLPMYFSSR--GKLTNTADLIRL 187 +++KA + + D K +A +E F F + +R + + Sbjct: 233 IKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQF 292 Query: 188 IIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ET 244 I RDE H Y ++ + ++ E + E ++ ++ Sbjct: 293 IARDENKHVELACIMYSLLNNRLKESV-------VYQIIDEAIEIEEEFINDSLPCKLLG 345 Query: 245 PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSY 304 ++ + ++ Y A++ L++LGY F + NP + +FF +Y Sbjct: 346 MNSELMSQYIKYVADRLLVDLGYRKKFNVD----NPFEYMK-KIDVFVKANFFEKRNDAY 400 Query: 305 VMGKAVE 311 Sbjct: 401 SNANIDN 407 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 105/322 (32%), Gaps = 25/322 (7%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT--LTVVEQQLTMRVFTGLTLLDTLQ 70 + E + NFW+P ++P+ D W T LT E L + LT D L Sbjct: 57 PVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLV 116 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDAAYAWSEENA 129 +++ + E+ H SY I + + + +E Sbjct: 117 PDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDEKGQGQIFNLYQEVP 176 Query: 130 PLQRKAQI----IQQHYRGDDP----------LKKKIASVFLESFLFYSGFWLPMYFSSR 175 L K + P L+ I+ E F GF + + Sbjct: 177 ALTEKLNWNLTFTNNVVNSEAPRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARK 236 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 GKL NTA I RDE +H + ++ +++ ++ + ++ E E Sbjct: 237 GKLRNTAQQYSYIWRDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETD 296 Query: 236 YTDELYAETPWADD-VKAFLC---YNANKALMNLGYEPLFPAEMAEVNPAILAALSPNAD 291 Y E VK ++ + A+ NLG +PLF P I + Sbjct: 297 YAHASMPEGGIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREH-PMPWISEYE---LN 352 Query: 292 ENHDFFSGSGSSYVMGKAVETE 313 +FF G Y G + + Sbjct: 353 HEVNFFEGRVREYQTGSQLTWD 374 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 129/359 (35%), Gaps = 47/359 (13%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 ++ +++ + ++ + S FW PE+V +S D + L E+ + + Sbjct: 21 GQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYAALPEHEKHIFISNLKY 80 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 TLLD++Q +L+P P E + +F E +H+RSY+ I + D + Sbjct: 81 QTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVN--DPSIVF 138 Query: 123 AWSEENAPLQRKAQIIQQHYRG-------------------------------DDPLKKK 151 N + ++AQ I +Y Sbjct: 139 DDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDGKECVVTLRSLKKQLYLCL 198 Query: 152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 ++ LE+ FY F F+ R + A +I+ I RDEA+H + Sbjct: 199 MSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQD 258 Query: 212 L----GQREELKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCYNANKALM 263 EE K A+DL + + E + D L+ + D + ++ Y N + Sbjct: 259 DPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQ 318 Query: 264 NLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETED----EDWN 318 +G F P I A L + + SSY++G+ D +D++ Sbjct: 319 AVGLPLPFQTRS-NPIPWINAWLVSDNVQVAP-QEVEVSSYLVGQIDSKVDTNDFDDFS 375 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 117/329 (35%), Gaps = 33/329 (10%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTL 69 + + W+ W +++ + +D+ W L+ E+ +++ T D Sbjct: 53 FKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVD 112 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 +G + P +L + EA+H SYS + STL Y + Sbjct: 113 VA-VGYVQYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNLPDVT---YQEFLKYK 168 Query: 130 PLQRKAQII--------------------QQHYRGDDPLKKKIASVFLESFLFYSGFWLP 169 ++ K + + + + +K + S F+E +S F + Sbjct: 169 AMKDKHEFVFNSRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGVQLFSSFIML 228 Query: 170 MYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKI-SLGQREELKSFAFDLLLE 228 + F+ G + +I+ I DE H + + + + S + L++ D + Sbjct: 229 LNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARK 288 Query: 229 LYDNELQYTDELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA 284 + E + D ++ ADDVK+++ Y N+ L +GY PL+ NP Sbjct: 289 IVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVE---NPLPWV 345 Query: 285 ALSPNADENHDFFSGSGSSYVMGKAVETE 313 NA + +FF + Y Sbjct: 346 EDLLNAPSHTNFFENKPTEYAKASLTGDW 374 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 102/319 (31%), Gaps = 26/319 (8%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + ++ ++FW E++ L+ D +Q LT ++ + D L N Sbjct: 39 PIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNK 98 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQ 132 + P ++ ME +++ YS + + + ++ Sbjct: 99 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVK 158 Query: 133 RKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR 190 KA I++ DD L ++ +A E + + + + + A R I R Sbjct: 159 HKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICR 218 Query: 191 DEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPWA 247 D + + + K + E+ ++ E + E +Y Sbjct: 219 DRGAYTDFSCLLFAHLRTKPNPKIIEK-------IITEAVEIEKEYYSNSLPVEKFGMDL 271 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMG 307 + ++ + A+ L G E + A VNP A + FF S Y Sbjct: 272 KSIHTYIEFVADGLLQGFGNEKYYNA----VNPFEFMEDVATAGKTT-FFEKKVSDYQKA 326 Query: 308 ---------KAVETEDEDW 317 D+D+ Sbjct: 327 SDMSKSATPSKEINFDDDF 345 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 114/311 (36%), Gaps = 15/311 (4%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDT 68 + +E+ + + W +++ L++D+ W+ L VE++ ++ T LD Sbjct: 71 YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDV 130 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEEN 128 + + +P +L + + E H ++Y+ + TL + +A+ + Sbjct: 131 SVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLGLPESDYSAF---LKY 187 Query: 129 APLQRKAQIIQQHYRGD--DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 + K + + + +V+ E ++ F + + F G + ++ Sbjct: 188 KQMTDKTDFMSDMRTDTIGNVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVE 247 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 IRDE VH + ++ + + ++ L E+ E + D ++ E Sbjct: 248 WSIRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKL 307 Query: 247 AD----DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 + DV ++ Y + + LG + NP + + + + +FF + Sbjct: 308 KNLKRVDVINYVKYILQRRTVQLGL----SNKTDLQNPILWVSWLISGRDVTNFFENRVT 363 Query: 303 SYVMGKAVETE 313 Y +G Sbjct: 364 EYDVGGLEGDW 374 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 99/313 (31%), Gaps = 20/313 (6%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 +++ + +W E++ SND + + Q R+ D++ N+ Sbjct: 57 KHKVIWDLYKKQKDAYWTAEEIDFSNDRHDFLKVDKNIQHFIKRILAFFAGADSIVNINI 116 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYS-SIFSTLCQTKDVDAAYAWSEENAPLQR 133 L E ME H+ Y+ + + + D + A ++R Sbjct: 117 KKKLSK-ITVKEAEIAYGFQQMMEDTHSEVYADMLIKIITDPVERDELINAFKTVASIKR 175 Query: 134 KAQIIQQHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFSS---RGKLTNTADLIRLII 189 Q Q+ + + E +F F + + LI Sbjct: 176 MIQWAQRWINSKRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNLIA 235 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY---AETPW 246 +DE +H + Y + ++S +L+ E + +T + Sbjct: 236 KDEGMHTIFGCVIYTFIIYRLSF-------EEICELMKEAVEICKSFTKDAICVDMIGMN 288 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVM 306 + + ++ Y A++ ++ LGYE +F + + +FF + Y Sbjct: 289 VELMYNYIEYVADRLMVYLGYEKIFM--TKIPDQFQFMDTIGFLN-KDNFFERRATEYQK 345 Query: 307 GKAVETEDEDWNF 319 + DWNF Sbjct: 346 A-YNDRNRADWNF 357 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 159/296 (53%), Gaps = 1/296 (0%) Query: 2 KLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFT 61 K A NWN + + D W RL + P +VP+ D + L EQ + + F Sbjct: 3 KRPYYKANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFG 62 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 LTL TLQ + + DA E AV + + ++E+++ ++YS + + +K + A Sbjct: 63 SLTLSSTLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDA 122 Query: 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 Y W+ +N LQ+K + + Y+ + ++KK A VFL + L++S F+ P+Y + KL T Sbjct: 123 YEWANQNPYLQKKMKFLNTVYQSGNAIQKKAAHVFLSTGLYHSSFFGPLYLFGQHKLPRT 182 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 A+LI+ +R ++G Y G K++++ K+S ++ ++ + +DL LYDNEL + LY Sbjct: 183 AELIKYALRITTLNGIYTGIKFRRDFFKLSKKEQNKVHDWVYDLCDNLYDNELSHIKLLY 242 Query: 242 AETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 T D V+ ++ Y NKALMNLG EP +P + ++P + L +A DFF Sbjct: 243 QNTDLEDKVEHYIHYTLNKALMNLGQEPKYPENVETLDPILTTGLMESA-MIKDFF 297 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 157/297 (52%), Gaps = 2/297 (0%) Query: 2 KLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFT 61 K S NWN + D D W RL + P +VP+ D + L EQ + + F Sbjct: 9 KKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLLHSFG 68 Query: 62 GLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDA 120 L L TLQ + + DA E AV + + ++E+++ ++Y + + + D Sbjct: 69 SLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNEQRDE 128 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 A+ W+ +N LQ+K +++ Y+ D+ ++KK A VF+ + L++S F+ P+Y + KL Sbjct: 129 AFNWANQNPYLQKKMRLLNTVYQSDNAIQKKAAHVFISTGLYHSSFFGPLYLFGQHKLPR 188 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 TA+LI+ +R ++G Y G K++++ +S +++ + + +DL LY NEL + L Sbjct: 189 TAELIKYALRITTLNGIYTGIKFRRDFFNLSKEEQKNIHKWVYDLCDRLYANELNHIHLL 248 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 Y +T D V+ ++ Y NKALMNLG EP +P + ++P + L +A DFF Sbjct: 249 YEDTGLEDKVEHYIHYTLNKALMNLGQEPKYPENVETLDPTLTTGLMESA-MIEDFF 304 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 116/325 (35%), Gaps = 22/325 (6%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLT-VVEQQLTMRVFTGLTLLDTL 69 + + ++ + W+ ++ L +D+ W+ + E+ + T T D + Sbjct: 17 YKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVV 76 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 +P L ++ E +H +Y+ T D+ + E Sbjct: 77 VADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGLP---DSMFGRFREYQ 133 Query: 130 PLQRKAQIIQQHYRG---DDPLKKKIASVFLESFLFYSGFWLPMYFSS---------RGK 177 ++ + ++ Y + + + F E F + F+ RG+ Sbjct: 134 EMRERNDLMATQYDPSMVEGLAMGLVHTTFNEGVCLMGAFANLLQFNRFDVPGFNGYRGR 193 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 + + +RDE +H Y+K M + +E K +DL + E + Sbjct: 194 YKGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFL 253 Query: 238 DELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN- 293 D + + T D+ KA++ Y N+ L+ LG++ +F + P I L + Sbjct: 254 DLAFKKYQLTMTKDESKAYVRYMMNRRLLQLGHKAIFEVQ-GIPCPWIEEILGGAGGKRD 312 Query: 294 HDFFSGSGSSYVMGKAVETEDEDWN 318 +FF +Y A+ E DW+ Sbjct: 313 SNFFETRVDNYQASGALVGE-LDWS 336 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 114/303 (37%), Gaps = 22/303 (7%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTL 69 + + + L ++ + +N+W+PE+ L+ND + + L +E+ + + + Sbjct: 25 LDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGW 84 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 + L E H ++ I L YA E Sbjct: 85 VGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGL--DLKPHEVYAMHENVK 141 Query: 130 PLQRKAQI-------IQQHYRGDDPLKKK-IASVFLESFLFYSGFWLPMYFSSRGKLTNT 181 ++RKA + + ++ ++ + LE F+SGF P+ F RG L N Sbjct: 142 EIKRKADFEVKRAMALCEEPTEENLIEDIFVYYAILEGLFFFSGFVTPLAFGRRGVLKNV 201 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 A L+R I++DE H + Y + ++ + + K L+ E D E +Y Sbjct: 202 AALVRWILKDETRHLAFGIYLLNELLK---DKNKNDYKDKFRVLMEEAVDIETEYARVAM 258 Query: 242 AETPWADDVKA---FLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFS 298 E + ++ Y A++ + +LG++ ++ + NP + + +FF Sbjct: 259 PEKIIGLSFETYTSYVKYLADRRMRSLGFDAIY----GQKNPMKWLTTQTDLPDLTNFFE 314 Query: 299 GSG 301 Sbjct: 315 AKV 317 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 14/317 (4%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTL 69 W+ I + E+ + FW+P++V +S D W T + +EQ+L + L +LD++ Sbjct: 32 WDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWATEMNEMEQELFLNAIGILAVLDSI 91 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 +A+++ ++ ME +H SY+ I S++ + ++N Sbjct: 92 AT-YFDNVAAYYIRDSAIKALMAFVAAMETIHNESYTYILSSVSSKAVSLDVFERPKKNE 150 Query: 130 PLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 + R+ +++ + + K +A LE F +GF +F+ GK+ T Sbjct: 151 FMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTG 210 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 +I+ I RDE H Y+ + + + EE F +D EL E ++ ++LY Sbjct: 211 TVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCEDLYK 270 Query: 243 ET--PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN-ADENHDFFSG 299 T ++VK ++ Y AN L NLG + +F A+ P I A N + DFF Sbjct: 271 NTPDIDIEEVKEYIGYRANLILDNLGLDQIFSAK-KNPMPWITAFDPDNLNNTKRDFFED 329 Query: 300 SGSSYVMGK-AVETEDE 315 +Y D+ Sbjct: 330 KEVNYGKANEQKNDWDD 346 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 133/356 (37%), Gaps = 44/356 (12%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 ++ +++ + ++ + S FW PE+V LS D +Q L E+ + + Sbjct: 21 GQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDYIDFQNLPQHEKHIFVSNLKY 80 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 TLLD++Q +L+P P E + SF E +H+RSY+ I + T + Sbjct: 81 QTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINT--PSLIF 138 Query: 123 AWSEENAPLQRKAQIIQQHYRGDDPLKK-------------------------------K 151 +N + +A+ I ++Y L Sbjct: 139 DDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTINGKKIKIDLHELKKKLYLCL 198 Query: 152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKN----M 207 I+ LE+ FY F F+ R K+ A +IRLI RDEA+H + Sbjct: 199 ISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEALHLTSTQHILNILHNDKN 258 Query: 208 EKISLGQREELKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCYNANKALM 263 + +E + L + + D E + L+ + + ++ Y N + Sbjct: 259 NEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGLNQEILSQYIEYITNIRMK 318 Query: 264 NLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAV-ETEDEDWN 318 +G F ++ P I + L + + S SSY++G+ E D D+ Sbjct: 319 AIGLPSPFKI-LSNPIPWINSWLISDNVQVAP-QEISVSSYLIGQINSEINDSDFE 372 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 119/325 (36%), Gaps = 20/325 (6%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTL 65 +N+ E W + + WL ++ + +DI W + LT E+ + + G Sbjct: 6 DRLNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQ 65 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 +T + + P + + E +HA +YS + L + Sbjct: 66 TETEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLDN-----FHAF 120 Query: 126 EENAPLQRKAQIIQQH-------YRGDDPLKK-KIASVFLESFLFYSGFWLPMYFSSRGK 177 E+ + K + + Y ++ + + S E +S F + + F + Sbjct: 121 LEDDVIMNKLKSLMDVRNSDHGKYNKEEIARSVALFSAAAEGVQLFSSFAVLLSFRKSNR 180 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 L I +RDE++H ++ E+ G +E ++ + + NE + Sbjct: 181 LKGVGQQIIFSVRDESLHSEAGCKIFRTFCEEN-KGLKEIVERSVYHGVDLALKNEFVFI 239 Query: 238 DELYAETPWA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 D+++ +++K F+ AN L LG+ + + ++ ++ + ++ Sbjct: 240 DKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDNMNWFYITISGEQQ 299 Query: 294 HDFFSGSGSSYVMGKAVETEDEDWN 318 DFF + Y + ++ ++ Sbjct: 300 TDFFDNRETGYSKPN-EDWNEDLFS 323 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 111/313 (35%), Gaps = 26/313 (8%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 E++ + W PE++ + D+ +++LT E+ L + L Sbjct: 21 NPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELLVQN 80 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQ 132 + P P+ + S FME +H+ + I +T D Y + E+ L Sbjct: 81 VLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTF--EMDRKRIYNITLEDKLLM 138 Query: 133 RKAQIIQQHYR---------------GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGK 177 K ++I + + ++ E FYS F GK Sbjct: 139 EKQELIIRAVDRITYGKADPDTLEGKKQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGK 198 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE-LKSFAFDLLLELYDNELQY 236 + N + LI+ DE++H +E+ +E + +++ + EL Y Sbjct: 199 MKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNY 258 Query: 237 TDELYAE----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 + +++ ++ Y A++ L LG++P F + NP + + Sbjct: 259 LKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKID---QNPLKFLQ-KEDVKK 314 Query: 293 NHDFFSGSGSSYV 305 +FF S + Y Sbjct: 315 LTNFFEVSSTEYT 327 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 115/324 (35%), Gaps = 18/324 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTL 65 I + + ++ + +FW+ +V + D+ +Q+ L E+ + Sbjct: 6 KRIGYKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQ 65 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 ++ +L P + S + E H+ +YS + L A+ Sbjct: 66 IEVSV-KTFWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYND----AFNHV 120 Query: 126 EENAPLQRKAQIIQQHYRGDDPLK-------KKIASVFLESFLFYSGFWLPMYFSS-RGK 177 E ++++ + + + + S+ +E+ +S F + + F+ +G Sbjct: 121 VEIPAIKKRIDFLSNVLKHANSTTPKEYVSSLLLFSILIENVSLFSQFAIILSFTRFKGY 180 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 + N +++I DE +H Y K E+ + + L+ + E + Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEIL 240 Query: 238 DELYAETPW----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 D ++ +++ F+ Y + +L +G + + E P + A+ Sbjct: 241 DWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSM 300 Query: 294 HDFFSGSGSSYVMGKAVETEDEDW 317 DFF+ Y TE++ + Sbjct: 301 DDFFAKRPVDYTKHDKSITENDLF 324 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 129/344 (37%), Gaps = 27/344 (7%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 +S ++ ++ + + + S FW PE+V ++ D + TLT E+++ Sbjct: 23 GDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKADYATLTPAEKRIYESNLKR 82 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST----------- 111 T+LD++Q + P A TP + + + EA+H+ SY+ I Sbjct: 83 QTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSLSYTHILRNTVNDPGIVFDH 142 Query: 112 -LCQTKDVDAAYAWSEENAPLQRK--AQIIQQHYRGDD-------PLKKKIASVFLESFL 161 L + VD A+ S + R ++ + + +D + A+ LE Sbjct: 143 VLDVAEIVDCAHQISTHYDDMVRYSGMRMAGRAFTREDIMNAKRAFWRALFAANTLEGIR 202 Query: 162 FYSGFWLPMYFSS-RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKN--MEKISLGQREEL 218 FY F F+ + K+ A +IR I RDE H + M+ REEL Sbjct: 203 FYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQDHLILTQTLLNRLPGMDPDFEIIREEL 262 Query: 219 KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMN-LG-YEPLFPAEMA 276 + + L++ + E Q+ D L+ + L + + L + +G +P E Sbjct: 263 RGEMTQMFLDVGNQEKQWADYLFQDGSMLGLNAKILHHMVDWLLTHRMGAIGHPYPGEPR 322 Query: 277 EVNPAIL-AALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF 319 + P N + Y+MG + + F Sbjct: 323 KECPVPWINEWLNNKTMQYALQEAEAPDYLMGVLTGSVSDGLKF 366 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +A+NWN+ D W + FWLPE++ +S DI W L+ E++L +V GLTLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 67 DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126 DT Q G PS+M +AVLS + ME +HA+SYSSIF TL ++D + W E Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 127 ENAPLQRKAQIIQQHYRGDDPLK----KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTA 182 LQRKA ++ Y + + SVFLESFLFYSGF+ P+Y S +GK+ + Sbjct: 130 TEPTLQRKADLVLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASG 189 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE 216 ++I LI+RDE++HG YIG Q+ + R Sbjct: 190 EIISLILRDESLHGKYIGLLAQEIYDSFVKWIRR 223 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 117/313 (37%), Gaps = 22/313 (7%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + + ++ S+ W ++ +DIP W+ ++ E+ +V + DTL A Sbjct: 79 YQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIA 138 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK----DVDAAYAWSEENAPL 131 + P + + + E VH R Y++ L + K D+ AY E + Sbjct: 139 -IFADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAP-I 196 Query: 132 QRKAQIIQQHYRGDDPLKK--KIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 ++K + + ++ + + V E+ +F + F + + F + I Sbjct: 197 KKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASFAILLKF-RAPYMRALVLGNEFIR 255 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET---PW 246 RDE +H + + ++ S +LL E + EL++ + + E Sbjct: 256 RDETLHFRFYAELLRLMPDRPSD-------ERIAELLTEATEIELEFAEYVVPEGVKYIT 308 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEV--NPAILAALSPNADENHDFFSGSGSSY 304 D + + N N+ L P++ + V +P + + ++ +FF G + Y Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLES-EQKINFFEGKATEY 367 Query: 305 VMGKAVETEDEDW 317 + + + Sbjct: 368 NTKQYKVDFNNLF 380 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 110/317 (34%), Gaps = 19/317 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLTVVEQQLTMRVFTGLTLLDTLQ 70 I + + + + + FW E++ S DI W +T E++ +R+ D + Sbjct: 40 PIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYFIRLLALFASND-MD 98 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD-VDAAYAWSEENA 129 L + TP + ++ +H Y + +L + + + + ++ Sbjct: 99 RENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKDDEKRTSMFEEIKDLT 158 Query: 130 PLQRKAQIIQQHYRGDDPL--KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRL 187 ++ K + + + +D L +K IA + S + + F G + + Sbjct: 159 NIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDN 218 Query: 188 IIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWA 247 ++RD +H + Y +I +++ A ++ + L Sbjct: 219 MLRDRGLHVDFCCLMYAHLKNQIDSEIVQKIIVDAVEIEKKSLLKALPIIKVNLK----I 274 Query: 248 DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA-----LSPNADENHDFFSGSGS 302 D++ F+ Y A+ L+ G E + A NP + N+ + S Sbjct: 275 DEMNQFIEYVADSILVAFGNEKHYNA----TNPYEFMENVVLPGNTNSLAKTIADAQKAS 330 Query: 303 SYVMGKAVETEDEDWNF 319 + + E ++F Sbjct: 331 EFAKTSKPDAETTTFSF 347 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 121/320 (37%), Gaps = 20/320 (6%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 S +++N+ D +++ + +N W P +V S + ++ LT EQ + F Sbjct: 22 GSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEALTDNEQSIYKMTFAQ 81 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 L+ D+ Q A ++V+S E H++SY+ + +++ + Sbjct: 82 LSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAVLLDACGNSEE---VF 137 Query: 123 AWSEENAPLQRKAQIIQQHY-------RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 + +A L +K + + + D L +ASV LE F GF Sbjct: 138 NLYKYDAALNKKNLQVAEQFAKYIDGGSADKMLLSAMASVNLEGIYFLLGFSYIYLLG-- 195 Query: 176 GKLTNTADLIRLIIRDE-AVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNEL 234 K+ D+I+ I RDE H ++ ++ ++ A+ ++ + EL Sbjct: 196 DKVPGARDMIKFIARDELNTHLPLFANIFKTIQKENNIATS--TIDAAYKMIQDAVKIEL 253 Query: 235 QYTDELYAE----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNA 290 +Y L + + ++ + AN L +G +P+F ++ Sbjct: 254 EYGHYLLDQFPIMGVTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMN 313 Query: 291 DENHDFFSGSGSSYVMGKAV 310 + +FF + S+Y Sbjct: 314 EVKSNFFESNVSNYAKSSID 333 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 8/206 (3%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 +K + + N N + +++ + +NFW+PEKV L+ D ++ LTV E++ + Sbjct: 25 IKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYENLTVPEREAYDGIL 84 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + L LD++Q P++ P +L+ +F EA+H++SY I ++ + D Sbjct: 85 SFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESILPKQSRDL 143 Query: 121 AYAWSEENAPLQRKAQIIQQHYR-------GDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 Y ++ L + I + Y+ ++ K IA+ LES FY+GF + Sbjct: 144 IYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVIIANYLLESLYFYNGFNFFYLLA 203 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYI 199 SR K+ T+D+IRLI RDE H Sbjct: 204 SRNKMVGTSDIIRLINRDELSHVVLF 229 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 114/324 (35%), Gaps = 18/324 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTL 65 +N+ + L+ + +W+ +V + D + L++ E+ + Sbjct: 6 KRVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQ 65 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 ++ ++ P + S + E H+ +YS + L + + Sbjct: 66 IEVAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE----FEKL 120 Query: 126 EENAPLQRKAQIIQQHYRG---DDPLKKKI----ASVFLESFLFYSGFWLPMYFSS-RGK 177 + ++R+ + + D K + S+ +E+ +S F + + F+ +G Sbjct: 121 LDVPVIRRRVDYLSNVLKDTKSQDNRKYMVSLILFSILIENVSLFSQFAILLSFTRFKGY 180 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 + N +++I DE +H Y K E+ EE + + + + E Sbjct: 181 MKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDIL 240 Query: 238 DELYAETPWAD----DVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 D ++ E D+ F+ + +++L + +F ++ + A+ Sbjct: 241 DWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSL 300 Query: 294 HDFFSGSGSSYVMGKAVETEDEDW 317 DFF+ Y T ++ + Sbjct: 301 DDFFAKRPVEYTKHDKSITANDLF 324 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 116/314 (36%), Gaps = 16/314 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQN 71 + ++ +S FW +++ + DI + +T E + TL + + Sbjct: 12 TFDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAG 71 Query: 72 VIGAP-SLMPDALTPHEEAVLSNISFME-AVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 ++ P E + + F E VHA Y+ I L + D Y + Sbjct: 72 RDYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALM--LNTDEFYLAYVNDP 129 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYF--SSRGKLTNTADLIRL 187 L+ + + + DDPL A +E + YS F +F + KL N I Sbjct: 130 ILKERMEFVDSLVEEDDPLYSLGAFSMVEGAVLYSSFAFLKHFQAKGKNKLMNVVRGINF 189 Query: 188 IIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLL---ELYDNELQYTDELYA-- 242 +RDE +H + Y ++I + +DL + ++E + D ++ Sbjct: 190 SVRDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKG 249 Query: 243 --ETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 E A+ +K F+ N L LG EP+F V N HDFFSG Sbjct: 250 EMEGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVA--EWFYDGINGVMFHDFFSGI 307 Query: 301 GSSYVMGKAVETED 314 G+SY + + Sbjct: 308 GNSYNRSWDEKGFN 321 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 115/326 (35%), Gaps = 29/326 (8%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + +++ + + W ++V L N +QT E ++ + D+ + Sbjct: 36 YPELFDLYKQQKAQDWSEDEVNLENSRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNII 95 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 L P A+++ + +E +HA +YS I D +N + ++ Sbjct: 96 TLLAPFISNNEFAAMVTKQTEIENLHALTYSEIVRQCIS--DPTEMIKRVMDNQAVLDRS 153 Query: 136 QIIQQHYRG--------------------DDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 I +K ++ + LE F + F + R Sbjct: 154 STIDDVMAELEILGAKKRLGYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQR 213 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE-LKSFAFDLLLELYDNEL 234 G A L++ I+ DE +H ++ Q + K +L E+ +NE Sbjct: 214 GLFMGVAQLVQKIMLDEILHSKMDFAALDILLKDPVWFQSYQNCKGDVQRILDEVMENES 273 Query: 235 QYTDELYAE-----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPN 289 + D +++E +K ++ Y+A L + +P + P + ++ + Sbjct: 274 NWADYIFSEGRSVVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNID 333 Query: 290 ADENHDFFSGSGSSYVMGKAVETEDE 315 + +N + S Y++ V +++ Sbjct: 334 SQQNAN-QEQDNSQYLLNTMVNDDED 358 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 18/318 (5%) Query: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + ++ + FW ++ + NDI + LT E V T+ + Sbjct: 19 IKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVGE 78 Query: 73 IGAPSLMPD-ALTPHEEAVLSNISFMEAV-HARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 + P + + S +E HA Y+ + L + A Y +E+ Sbjct: 79 DYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDE--AFYTSWKESEE 136 Query: 131 LQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR----GKLTNTADLIR 186 L R+ Q + + D K A F+E + YS F +F ++ + N + Sbjct: 137 LSRRIQFVGKSVNDPDDAKSFAAFTFIEGAVLYSSFAFLKHFQAQECGKDLMRNICRGVD 196 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREE----LKSFAFDLLLELYDNELQYTDELYA 242 L + DE H +Q ++ E+ LK+ ++ +++D+E D ++A Sbjct: 197 LSVADEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFA 256 Query: 243 E---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSG 299 E AD+++ F+ N L NLGYEP+F E + + NA + HDFF+G Sbjct: 257 EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIA--DWFYRTINAKKFHDFFTG 314 Query: 300 SGSSYVMGKAVETEDEDW 317 SGS Y + E + W Sbjct: 315 SGSEYNINWNREGFSDCW 332 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 113/320 (35%), Gaps = 18/320 (5%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTL 69 L+ + + +++W+ ++ DI ++ T EQ R + ++ + Sbjct: 44 LKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-V 102 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 Q + D V + E H +YS + L + + E Sbjct: 103 QVKTFWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE----FEQITEVP 158 Query: 130 PLQRKAQIIQQHYRGDDPLKK-------KIASVFLESFLFYSGFWLPMYFSSR-GKLTNT 181 +Q++ + + ++ K + S F+E +S F + F K Sbjct: 159 AVQQRIEYLDEYLEMGSSENKQESVMGILMFSTFVEHVSLFSQFLIMTSFDKHEKKFKGI 218 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 A+ + ++E +HG + + E+ ++ D + Y+ E + D + Sbjct: 219 ANAVEATSKEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWIL 278 Query: 242 AETPWA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 + + + AFL N++L N G +P+F + V+ + +DFF Sbjct: 279 EDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFF 338 Query: 298 SGSGSSYVMGKAVETEDEDW 317 S ++Y T D+ + Sbjct: 339 SKRSTTYNKHTQSVTADDMF 358 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 119/324 (36%), Gaps = 18/324 (5%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTL 65 L+ + + +++W+ + S D+ ++ T E+ + R + Sbjct: 18 ERTQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQ 77 Query: 66 LDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 ++ +Q + + V + E H +YS + L T+D + Sbjct: 78 IE-VQVKTFWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED----FEEV 132 Query: 126 EENAPLQRKAQIIQQHYRGDDPLKK-------KIASVFLESFLFYSGFWLPMYFSS-RGK 177 + ++ + + + ++ + K + S F+E +S F + M F + K Sbjct: 133 TDVPAIEDRIEYLDKYLEKSESDDKQEYVMSILLFSTFVEHVSLFSQFLIMMSFDKYKKK 192 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYT 237 A+ + ++E +HG + + E+ E+ + ++ E++ Sbjct: 193 FKGIANAVEATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKIL 252 Query: 238 DELYAETPWA----DDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADEN 293 D ++ E V AFL N++L N+G EP+F + + ++ Sbjct: 253 DWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKD 312 Query: 294 HDFFSGSGSSYVMGKAVETEDEDW 317 +DFFS ++Y T ++ + Sbjct: 313 NDFFSKRSTTYNKHAQSVTAEDMF 336 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 9/237 (3%) Query: 91 LSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKK 150 + I FME VHA+SYSS+FSTL ++D+D A+AW E N Q K + + Y D + Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 151 KI---------ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGY 201 ++ +SV LESFLFY+GF+LP++F+S+GKLTNTADLIRLI+RDE VHGYY+GY Sbjct: 61 RVEYYGAIIRASSVLLESFLFYTGFYLPLHFASQGKLTNTADLIRLIMRDEGVHGYYLGY 120 Query: 202 KYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKA 261 K+QK ME +R+ +K +L L+ NE+ +E+Y + V+ FL YN NKA Sbjct: 121 KFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIYEPLGLSAQVQTFLRYNLNKA 180 Query: 262 LMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 + NLG E +FPAEM V P IL+ LS +++E HDFFSGSGSSYV+G+A ET D+DW+ Sbjct: 181 MQNLGLENVFPAEMTRVEPRILSQLSVDSEETHDFFSGSGSSYVIGQAEETTDDDWS 237 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 3/180 (1%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I E + + + FW E+V L D+ W+ LT E+Q + D + Sbjct: 321 PIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISSILAFFAASDGIVTE 380 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + +E +H+ Y+ + + + + + + Sbjct: 381 NLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFI 440 Query: 132 QRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 + KA + + ++ A +E F S F + RG L LI Sbjct: 441 KAKADWCLRWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 16/260 (6%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRL-TSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMR 58 +K + + N+I +++ + +NFW+PE++ + D ++T L+ E++ Sbjct: 29 IKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDYEKRAYEL 88 Query: 59 VFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV 118 V + L LD+ Q + P E ++ F E+VHA SY I ++ Sbjct: 89 VLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVHAYSYQFILESVVDPVKA 147 Query: 119 DAAYAWSEENAPLQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMY 171 D Y + E+ L + ++I + Y ++ +K I + LES FYSGF Sbjct: 148 DEIYNYWREDERLLERNKVIAELYNEFIRKPNEENFIKATIGNYILESLYFYSGFAFFYT 207 Query: 172 FSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYD 231 +GK+ NT I+ I RDE ++ + ++L + ++ Sbjct: 208 LGRQGKMRNTVQQIKYINRDELCFIEGTEVLTKRGFVDFRELREDDLVAQ-----YDIET 262 Query: 232 NELQYTD-ELYAETPWADDV 250 E+ +T Y E + + Sbjct: 263 GEISWTKPYAYVERDYEGSM 282 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 39/123 (31%), Gaps = 4/123 (3%) Query: 193 AVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPWADD 249 H ++ E++ + + + E+++ + Sbjct: 575 NCHVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVL 634 Query: 250 VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKA 309 ++ ++ Y N + +G++P++P I N + DFF +Y Sbjct: 635 IERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKIN-NTKTDFFQAKPQTYSKANE 693 Query: 310 VET 312 ++ Sbjct: 694 LKW 696 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 130/350 (37%), Gaps = 37/350 (10%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + ++ +++ + + S FW ++ L D W L Q++T+ Sbjct: 19 GDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQWPNLPREIQEITLLNLAW 78 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQT--KDVDA 120 T D+ + ++MP P E +L S+ E +H+R+YS+I + + +D+ Sbjct: 79 QTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVLTDPAEFIDS 138 Query: 121 AYAWSEENAPLQRKAQIIQQHY------------RGDD-----------------PLKKK 151 E A + ++ + Y RGD+ L Sbjct: 139 VTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPETEFPEVKRETQAKLLDAY 198 Query: 152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 A LE+ FY+ F + L A ++LI +DEA+H Q ++ Sbjct: 199 FAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEALHTQMSKAIIQIMFQQFD 258 Query: 212 LGQREELKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCYNANKALMNLGY 267 +E + A LL+ E+++ ++ A+ ++ +L + A M++G Sbjct: 259 KDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLNAELLEEYLYFVGRNAFMHIGV 318 Query: 268 E--PLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDE 315 E P P I+ L + + G++Y +G+ ET + Sbjct: 319 EWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAYRVGQVTETSTD 368 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 96/286 (33%), Gaps = 16/286 (5%) Query: 42 IPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDAL--TPHEEAVLSNISFMEA 99 + W LT E++ D + + + E + E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 100 VHARSYSSIFSTLCQ-TKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPL-KKKIASVFL 157 +H +Y ++ L K + A ++ A +++ PL ++ IA L Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPERIIAFAAL 120 Query: 158 ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE 217 E +F F YF+ +L I +DEA+H + Y+ ++ I R Sbjct: 121 EGVIFTGSFAAIHYFTITNRLKGLRKANEWISKDEALHQRFAEAVYRYIVDVIKAFPRV- 179 Query: 218 LKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALMNLGYEPLFPAE 274 + ++L D + + A+ + ++ A+ +LGYE F ++ Sbjct: 180 SQERVQEILGSAIDAVSPFIHDCLRFKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSD 239 Query: 275 MAEVNPAILAALSPNADENHDFFSGSGSSYVM---GKAVETEDEDW 317 + L D +FF + Y G ++D D+ Sbjct: 240 SS----LDYM-LLIGMDNKTNFFEEVVADYAKGLEGGGEFSKDADF 280 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 105/306 (34%), Gaps = 21/306 (6%) Query: 17 DKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAP 76 + + N WL ++ D L+ E +F L+ D L Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 77 SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD--VDAAYAWSEENAPLQRK 134 L +E H+R Y+ I L D A + + ++ K Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 135 AQIIQQHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 ++ R + +K I + +E F + F Y + L T LI RDEA Sbjct: 163 VDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEA 222 Query: 194 VHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD-------ELYAETPW 246 VH Y Y + G + + L + + E+ + + + Sbjct: 223 VHTTASCYIYNNYLG----GHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAAL 278 Query: 247 ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVN-PAILAALSPNADENHDFFSGSGSSYV 305 A ++ ++ ++A++ L + +PLF A + + P L + D++ +FF +SY Sbjct: 279 AA-IENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLM----STDKHTNFFECRSTSYA 333 Query: 306 MGKAVE 311 + Sbjct: 334 GAVVND 339 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 120/333 (36%), Gaps = 31/333 (9%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + E++ + W ++V LS I + T + + ++ D++ Sbjct: 33 KYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKSTYDVMVQTLMWQWEADSVAARSI 92 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK 134 P +L S +E +HA +YS I +EN + + Sbjct: 93 ICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQCLPNA--REIIEEIQENQNVLSR 150 Query: 135 AQIIQQHYRG----------------DDPLKKKI-----ASVFLESFLFYSGFWLPMYFS 173 + +I ++ + +D ++K I A + LES F + F + Sbjct: 151 SGVIVKYMQELEVIGAKYRLDPSSVKEDIVRKCILRALFALLALESIEFIASFACTFAVA 210 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQR-EELKSFAFDLLLELYDN 232 +G A L++ I+ DE +H + + + E+K ++L E+ Sbjct: 211 EQGIFVQVAQLVQKIMLDEMLHSKGDFAIIDILLNDPAWEKSFLEIKGELKEILDEVRTK 270 Query: 233 ELQYTDELYAE-----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALS 287 E ++D +++E + +K ++ YN + G + F + P + + Sbjct: 271 EYGWSDYIFSEGRAIIGLNSPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMK 330 Query: 288 PNADENHDFFSGSGSSYVM-GKAVETEDEDWNF 319 P+ + + S + Y + + E+E W F Sbjct: 331 PSLQQTAN-QEMSNTDYRVNTTVNDAEEEIWEF 362 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 118/319 (36%), Gaps = 25/319 (7%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLTVVEQQLTMRVFTGLTLLDTLQN 71 I + + + + FW E++ S+DI W + + ++ + + L L + Sbjct: 54 PIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKASDHDKSIIKKSLAFL-CSSVLGS 112 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-QTKDVDAAYAWSEENAP 130 + + P + +E +H YS L T ++ + + Sbjct: 113 FYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSLAIDQLVHNTDEIKKMFKDVDNAKF 172 Query: 131 LQRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 ++RK ++ + + +K +A +E+ F+ M + + I+LI Sbjct: 173 IERKKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLI 232 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD 248 ++D VH + Y + +++ G E + + A ++ EL E Y ++ + Sbjct: 233 LKDHIVHCDFQMSIYSELKKRLDPGIIERIVTEAVEI--ELETLEDDYFNKQL-DKETKA 289 Query: 249 DVKAFLCYNANKALMNLGYEPLF----------PAEMAEVNPAILAALSPNADENHDFFS 298 D+K + Y ++ LM G + F V P ++ S N + FS Sbjct: 290 DIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTK----FS 345 Query: 299 GSGSSYVMGKAVETEDEDW 317 + + + + D+++ Sbjct: 346 KTE---KIAASEISFDDEF 361 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 7/297 (2%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 AINWN + D+ D VW R TS FWL ++P+ ND W L + EQ + LT Sbjct: 7 YYRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLT 66 Query: 65 LLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW 124 L T Q++ + + E A+L+NI F+E V+ ++Y+ I T + +++ ++ W Sbjct: 67 NLSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEW 126 Query: 125 SEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADL 184 + ++ + I YR +KK+ ++ +E L Y+ + N + Sbjct: 127 VDNDSRVLEYLNDINTVYRESSLIKKRFIALCVEGLLNYAYLSHLFELWINKEFNNLGTM 186 Query: 185 IRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET 244 + +IIR+E++H +Y +K + +++ + E K+++++ + L D+ Y Sbjct: 187 LEMIIRNESLHCFYFSHKVKLLLKESDPKEVERFKAWSYETVNHFVKLGLNIIDDFYYLK 246 Query: 245 PWADDVKAFLCYNANKALMNLGYEPLF-------PAEMAEVNPAILAALSPNADENH 294 K + AN LM +G + F +N LS +++++ Sbjct: 247 ESKKIAKNLILQEANNILMGIGLKEQFGFNDEVLKGINYRLNNLRRHYLSISSNKST 303 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 108/337 (32%), Gaps = 39/337 (11%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 K E++ + + W ++ P ++++ + + + DT Sbjct: 22 HYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSL 81 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK 134 A + P + S +E +HA +YS I + + +N +Q + Sbjct: 82 AFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPET--ILDEINQNVAVQDR 139 Query: 135 AQIIQQHYRG--------------------------DDPLKKKIASVFLESFLFYSGFWL 168 + + + LK A LE F + F Sbjct: 140 LKTVNRVLEELLDEGINYRLSYVRDSLLDKDPLHFHKVILKGLFAVTALEGISFMASFAC 199 Query: 169 PMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKS---FAFDL 225 ++ K A ++ I+ DE +H ++ + ++ + + Sbjct: 200 TFALDAQDKFQGIAQAVQKIMLDEILHTKIDIEVLKETLR--DDEWQKAFQQILPEIKVI 257 Query: 226 LLELYDNELQYTDELYAE-----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNP 280 L E+ ++E +++ +++E + ++ YNA G F A Sbjct: 258 LDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLK 317 Query: 281 AILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDW 317 ++ + + ++N + +Y++ V+ + + Sbjct: 318 YMIKKMEIDKEQNAN-QEQQNGAYLLNTVVDDLNSGF 353 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 110/292 (37%), Gaps = 14/292 (4%) Query: 19 DLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL 78 LE+ N W P +VPL D+ L + + +FT L + + L N+ L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINI-EDL 74 Query: 79 MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK--DVDAAYAWSEENAPLQRKAQ 136 + + + ME +H + Y++I + L + +V + ++ LQ K + Sbjct: 75 LSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 137 IIQ-QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 + + D +K + + +E F S F+ F RG + I RDE +H Sbjct: 135 WLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEMLH 194 Query: 196 GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD--DVKAF 253 Y + + + + L E + E ++ + +++ F Sbjct: 195 TSAAALLYNTM----TKSSERPSEDWIYKLFREAVEVEFKFIAAKGYGVSLVNVHEIRQF 250 Query: 254 LCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305 L A++ L ++ P++ + E P ++ ++ +FF S Y Sbjct: 251 LQATADRILESINLNPIYGSLPPENCPLAY----TSSTKSVNFFERDNSDYT 298 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 1/134 (0%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I +++ + ++FW E+V LS D+ W++L E+ V D + N Sbjct: 16 PIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFISHVLAFFAASDGIVNE 75 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPL 131 + ME +H+ YS + T + + + + + E + Sbjct: 76 NLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCV 135 Query: 132 QRKAQIIQQHYRGD 145 ++KA Sbjct: 136 KKKADWALNWIGNQ 149 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 2/40 (5%) Query: 279 NPAILAALSPNADENHDFFSGSGSSYV-MGKAVETEDEDW 317 NP + + + +FF Y MG D + Sbjct: 325 NPFDFME-NISLEGKTNFFEKRVGEYQRMGVMAGAADNTF 363 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 117/359 (32%), Gaps = 56/359 (15%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 ++ E+ + S FW PE+V L D + L +Q + +LLD Sbjct: 25 LARYDIQRHKVFEELIE-ILSFFWRPEEVNLMLDSAQFNKLPQFQQDICTNNLKYQSLLD 83 Query: 68 TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEE 127 ++Q + LM P + ++ +F E +H+RSY+ I L D + Sbjct: 84 SIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRSYTHIMRNLYT--DPSKVFDEIVL 141 Query: 128 NAPLQRKAQIIQQHYRG--------------------------------------DDPLK 149 + + ++A+ I ++Y D +K Sbjct: 142 DEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSCQQNDIEMYEEIMFNAKRDLMK 201 Query: 150 K--KIASVF--LESFLFYSGFWLPMYFSSR-GKLTNTADLIRLIIRDEAVHGYYIGYK-- 202 V LE+ FY F F + A +++ I RDE +H + Sbjct: 202 SLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAKIMKFIARDEQLHLRVLSTLSV 261 Query: 203 -YQKNMEKIS-LGQREELKSFAFDLLLELYDNELQYTDELYAE----TPWADDVKAFLCY 256 + + +S + + L +L ++ L+ + + AF+ Y Sbjct: 262 NFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAHLFKDGTCPGINTQSMCAFVDY 321 Query: 257 NANKALMNLGYE-PLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETED 314 + G P+ A P I L+ + + SSY++ + D Sbjct: 322 LTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAAP-QEVEISSYLVAQIDNDVD 379 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 108/319 (33%), Gaps = 16/319 (5%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 + + L + + ++W+ + +D+ E+ L R + ++ Sbjct: 10 YRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV 69 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 + + P V + E HA +Y+ L +A E + Sbjct: 70 -KLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH---LLELLGLEEAFGQALEGASA 125 Query: 131 LQRKAQIIQQHYRG-------DDPLKKKIASVFLESFLFYSGFWLPMYFSSRG-KLTNTA 182 L+ +AQ + + R + L + S F E +S F++ M + RG + + Sbjct: 126 LRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVSLFSQFYVLMALNRRGNRYKGIS 185 Query: 183 DLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA 242 + I ++E VHG + + + E + A L L+ E D L++ Sbjct: 186 NAIEATSKEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFS 245 Query: 243 ETP----WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFS 298 + FL N+ L G P FP + + L AD+ DFF+ Sbjct: 246 AGEPALVGHRETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEVDFFN 305 Query: 299 GSGSSYVMGKAVETEDEDW 317 +Y +E + Sbjct: 306 KRSVAYARRVQSFDPEELF 324 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 109/330 (33%), Gaps = 30/330 (9%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 + +S + ++ N W ++V +D + +L Q+ TL+D+ Sbjct: 27 DSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAFKLNIAYQTLMDSGVT 86 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQ---TKDVDAAYAWSEEN 128 + L + + + I+ E +HA SYS S + T +D Y Sbjct: 87 SGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHEATDTLDLVYNDEFVK 146 Query: 129 APLQRKAQIIQQHYRGDDP--------------LKKKIASVFLESFLFYSGFWLPMYFSS 174 ++++ ++ + LK I LES F F + ++ Sbjct: 147 HRMEKEVELFGNVDELCNLENSPATLDEKKQAVLKLLIGIYLLESVKFPFSFLVTFTINN 206 Query: 175 R--GKLTNTADLIRLIIRDE-AVHGYYIGYKYQKNMEKISLGQREELKS-FAFDLLLELY 230 + I+LI DE H ++ G KS + + + Sbjct: 207 NYDNAIAGFTKTIKLIAHDELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMA 266 Query: 231 DN----ELQYTDELYAE----TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAI 282 + E+++ L+ + + F+ Y A L +LG E + + ++V Sbjct: 267 EFTVNEEIKWAKYLFDGYQVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDWF 326 Query: 283 LAALSPNADENHDFFSGSGSSYVMGKAVET 312 + N +N + +SY G Sbjct: 327 NSYRDIN-KQNAALQETTNTSYQKGALKND 355 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 18/313 (5%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + S FW E D +++ + +L D Sbjct: 33 PIKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNMLVKLFELICFYSLKDLHVYE 92 Query: 73 I---GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA-AYAWSEEN 128 ++ P A ME +H Y+ IF T + Sbjct: 93 EQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDAKQKRTIINKVIQL 152 Query: 129 APLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRL 187 + +K + + + + + P K+ +++ LF + + Y L ++ Sbjct: 153 DSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNILIGYCKENSILPCLCNVHEK 212 Query: 188 IIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW- 246 I RDE +HG + K+ D E Q+ E+ + Sbjct: 213 IHRDEYLHGDFSVMCCNHLNNKLKY-------ERLLDYFKMAVKLEYQFAIEMLDLSVLK 265 Query: 247 --ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSY 304 + VK+FL Y A+ L+NL + F ++ P + + ++ + S + Sbjct: 266 IKKEQVKSFLEYLADTMLVNLKHPKYFNSKYPFTWP-EFNKIVVSENQKTE--SVKKAED 322 Query: 305 VMGKAVETEDEDW 317 + G+ DED+ Sbjct: 323 IYGERQIVLDEDF 335 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 93/269 (34%), Gaps = 16/269 (5%) Query: 13 KISDDKDLEVWNR-LTSNFWLPEKVP--LSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTL 69 I K E++ + L S+ W E+ + NDI + + + L Sbjct: 29 PIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDISKLSEICNSDHSFIKIILAFLVANC-K 87 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 Q + + M+ +H Y ++F L + + + Sbjct: 88 QKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHYEMYCNLFEILTEETERSELIE--KMIN 144 Query: 130 PLQRKAQIIQQHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 +K+Q ++ D+ ++ I V +E + F+ + RG ++ LI Sbjct: 145 STMKKSQYTKKWLNSDNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLI 204 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD 248 RDE H ++ Y + ++ L+ E D E ++ L E D Sbjct: 205 FRDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFITSLPTELIELD 258 Query: 249 D--VKAFLCYNANKALMNLGYEPLFPAEM 275 + ++ ++ L++ GYE LF E Sbjct: 259 RNSMYQYVEVVSDNILISFGYEKLFHTEN 287 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 4/148 (2%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 I + + + ++FW E+V LS D+ W L E+ RV D + Sbjct: 104 PIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKLNDNERYFVSRVLAFFAASDGIVG 163 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAP 130 + + +P ++ ME +H+ YS + T + ++ D + E Sbjct: 164 ENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVKDPQEADFLFNAIENIPC 223 Query: 131 LQRKAQIIQQHYRGDDPL--KKKIASVF 156 + +KA+ + + D L ++ +A Sbjct: 224 ITKKAEWAIKWIQDKDALYAERLVAFCC 251 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 22/300 (7%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 +NW+ + L+++ + FW P + S D W+ LT E+ R+ + Sbjct: 13 GLNWDSL----PLKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGE 68 Query: 68 TLQNVIGAPSL--MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 P + M +E L+ +F EA H + + + T D+ Sbjct: 69 ESVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDLHHFLDDV 128 Query: 126 EENAPL--QRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFWLPMY-FSSRGKL 178 + + + P + ASV +E L +G++ RG L Sbjct: 129 PSYRTIFYEELPDCLNALTIDPSPAAQVRASVTYNHMVEGMLALTGYFGWHKICVERGIL 188 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDN-ELQYT 237 +L+R I DE H + + ++++ ++ +L+ E + Sbjct: 189 PGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWGV-FETRMNELMPLGLRLIEEGFA 247 Query: 238 DELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297 LY P+ V F+ Y ++K + G A P L + D F Sbjct: 248 --LYDPMPFDLSVDEFMAYASDKGMRRFG-----TIASARGRPLAEIDLDYTPVQLEDTF 300 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 103/301 (34%), Gaps = 23/301 (7%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 +NW + L+++ + FW P + + D W+ L+ E+ R+ T + Sbjct: 13 GLNWASL----PLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGE 68 Query: 68 TLQNVIGAPSL--MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 P + M +E L+ +F EA H + + + ++D+ Sbjct: 69 EAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDL 128 Query: 126 EENAPL--QRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFWLPMY-FSSRGKL 178 + + + P + ASV +E L +G++ R L Sbjct: 129 PAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAIL 188 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDN-ELQYT 237 +L+R I DE H + + ++++ ++ +L+ E + Sbjct: 189 PGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTV-FETRMNELIPLALRLIEEGFA 247 Query: 238 DELYAETPWADDVK-AFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDF 296 LY + P D K FL Y+ +K + G A P + + + D Sbjct: 248 --LYGDQPPFDLSKDDFLQYSTDKGMRRFG-----TISNARGRPVAEIDVDYSPAQLEDT 300 Query: 297 F 297 F Sbjct: 301 F 301 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 15/171 (8%) Query: 147 PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKN 206 ++ IA +E F F + +G + LI R E +H + Y Sbjct: 98 FAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLYSLL 157 Query: 207 MEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFLCYNANKALM 263 +++ ++ E + E Q+ E A + ++ + ++ L+ Sbjct: 158 QKQLPW-------QKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLV 210 Query: 264 NLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETED 314 LGYE + E NP N +FF Y + + D Sbjct: 211 ALGYERKYNVE----NPFDWMEF-IFLQGNANFFQRRMGDYQKASIMSSLD 256 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 104/271 (38%), Gaps = 15/271 (5%) Query: 5 RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 R +NW+ L ++ + + FW P + S D W+ L +Q+ + + Sbjct: 21 RAGGLNWDA----FPLRLFTKGNAKFWNPTDLDFSRDAEDWEGLNSEQQRNSTYLVAQFI 76 Query: 65 LLDTLQNVIGAPSL--MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV---- 118 + P + M +E L+ F EA H + + + T+D+ Sbjct: 77 AGEEAVTEDIQPFMKAMAAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRDLHPFV 136 Query: 119 -DAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKI-ASVFLESFLFYSGFWLPMY-FSSR 175 + Y L ++++ + ++ + + +E L +G++ ++R Sbjct: 137 AENPYYRQLFYEELPGSLKVLETDPSPVNQVRASVTYNHVIEGSLALTGYYAWQKVCTTR 196 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ 235 G L +L+R I DE H + + ++++ ++ +L+ + Sbjct: 197 GILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDSNWGV-VQERMAELMPLALGM-ID 254 Query: 236 YTDELYAETPWADDVKAFLCYNANKALMNLG 266 + ++ + P+ D + F+ Y A++A LG Sbjct: 255 WVNKQFEVQPYGLDDQEFIAYAADRAQRRLG 285 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 110/345 (31%), Gaps = 41/345 (11%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIG 74 K E++ RL W + S + ++T + ++ D++ + Sbjct: 39 HYPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIKTLAWQWEADSVASRSI 98 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST--------------LCQTKDVDA 120 L P A I+ E VHA +YS I + + ++ Sbjct: 99 VNILSPVMTDSRVWAGYVRINDNEDVHALTYSEIVRNSFKDPKVILDEILRVEEAQERMV 158 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKK----IASVFLESFLFYSGFWLPMYFSSRG 176 A A + A A + Q + K IA FLE F + F + G Sbjct: 159 AVARTMGEAHDAVHAYALNQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTG 218 Query: 177 KLTNTADLIRLIIRDE-AVHGYYIGYKYQKNME-KISLGQREELKSFAFDLLLELYDNEL 234 A ++ I +DE +H Y + + + + K +LL E+ E+ Sbjct: 219 AFQQIAAAVKKIAQDEFEIHAQYGQEVIRALLATERGKLAYSQCKDKIIELLWEIVKTEV 278 Query: 235 QYTDELYAE-----TPWADDVKAFLCYNANKALMNLGYEPL--------------FPAEM 275 + + L++E A + ++ +NAN A L E F Sbjct: 279 TWINYLFSEGRELTGVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVW 338 Query: 276 AEVNPAILAA--LSPNADENHDFFSGSGSSYVMGKAVETEDEDWN 318 E NP + L ++ + V E+E++ Sbjct: 339 PEKNPLLYMEDYLDISSTQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 9/206 (4%) Query: 19 DLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPS 77 + ++++ W P + + D WQ + E+++ +R+ + + + P Sbjct: 24 PMRLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSLFVAGEEAVTLDLLPL 83 Query: 78 LMPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 +M A EE L+ F EA H + + + + Sbjct: 84 IMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDLSVFHKDHYRKIFYEYL 143 Query: 136 -----QIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTNTADLIRLII 189 +++ ++ +E L +G++ KL IRL+ Sbjct: 144 PQAMGRLVHDPSPEAQAEASVTYNMVVEGVLAETGYYAFYTALQKENKLPGLIQAIRLLQ 203 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQR 215 RDE+ H Y Y + + + + Sbjct: 204 RDESRHIGYGTYLLSRLISENAHIWD 229 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 17/321 (5%) Query: 1 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF 60 M AINW++ D D W +LT+NFWL +VP+++D P+W LT +Q Sbjct: 1 MDYLYYKAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHAL 60 Query: 61 TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 G LL Q+ +GAPSL T EEAVL+ I+FME+VH ++ ++IF L + A Sbjct: 61 AGRALLSAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTDEETTAA 120 Query: 121 AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN 180 YAW++ APLQ + + GDD +++ + + + +GF ++ L Sbjct: 121 YYAWADGQAPLQAALTDLTKGIEGDDLMRRGLF--LIADTVLCAGF--DWAVLTQPALAQ 176 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 T +++ I+ + Y+ YK+++ + ++ ++E L + L Q + L Sbjct: 177 TNQMLKNILTGNLIFRDYLAYKFRQGIAELPFAKQEALVAQLTKGAQSLIKLAHQQNEAL 236 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS 300 + A+D+ + + L+ LG PAE V + A++ Sbjct: 237 LEDAGAANDL---VDFQWRMLLVALGLGEQ-PAESGPVA----HQIDQLANQA---QETV 285 Query: 301 GSSYVMGKAVETE--DEDWNF 319 + D+D++F Sbjct: 286 VVETIKDADATEFMSDDDYDF 306 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 20/266 (7%) Query: 15 SDDKDLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVI 73 D + ++ + W P + S D+ WQTLT E+ L +R+ + + + Sbjct: 15 RDTVPMRLFEKAKRLGVWNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQAGEEAVTLD 74 Query: 74 GAPSLMPDA--LTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 P + A EE L++ + EA H ++ + + + Y S A + Sbjct: 75 LLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTGVTGDLSHYHTSNYRALI 134 Query: 132 QRKAQIIQQHYRGD-----DPLKKKIASVFLESFLFYSGF-WLPMYFSSRGKLTNTADLI 185 R D + ++ +E L +G+ R + T I Sbjct: 135 HEALPAAMGRLRDDPSPEAQAIASLTYNMIVEGVLAETGYHAYFTMLERRDLMPGTRKGI 194 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY---- 241 L+ +DE+ H Y Y + + + + EL + D+ + Sbjct: 195 GLLKQDESRHIAYGVYLLSRLINAEPRLW-----DVIVERMNELVVYAMGVIDDAFACYE 249 Query: 242 --AETPWADDVKAFLCYNANKALMNL 265 DD F + L + Sbjct: 250 VVPFGLSHDDFMHFAMGQFQRRLDRI 275 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 4/180 (2%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQ 70 N+IS +++ + +N W+ E++ S+D W+ LT E+ V + Sbjct: 80 NEISPLDIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGII 139 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV-DAAYAWSEENA 129 N M P + + ++ +H+ +YS + T + K++ D + E Sbjct: 140 NKNL-NRFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIP 198 Query: 130 PLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 +++KA+ + + K+ +A V ES F F + R + LI Sbjct: 199 CVKKKAEWALKWIN-ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 91/269 (33%), Gaps = 26/269 (9%) Query: 7 SAINW--NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLT 64 +A W I D ++ + ++FW E +N+ + +L +QL +++ + Sbjct: 27 NANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQLVVKLISYHN 86 Query: 65 LLD-TLQNV--IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 LD + L+ D P A E +H+ + + S + T D Sbjct: 87 RLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSSAIPGTID---- 142 Query: 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM-YFSSRGKLTN 180 K + + ++ K+ + +F S F + Y + KL Sbjct: 143 ------VPEADAKIEWLTRNLTSTSCFYIKVILQCISKAIFRSAFGILADYLRNSKKLPT 196 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240 + + +D ++H + M + + + +LL YD E+ Y + Sbjct: 197 LLSALDTVAKDVSIHLKFA-------MAALEHLKLRPTRETVMELLNSAYDLEMAYCRSV 249 Query: 241 YA---ETPWADDVKAFLCYNANKALMNLG 266 + ++ N N+ L+ G Sbjct: 250 LPMDHMGLSEYHLSQYIKNNVNQCLLITG 278 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 86/285 (30%), Gaps = 33/285 (11%) Query: 19 DLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAP- 76 +++ + N W P + S D + LT E+ + + G + + + P Sbjct: 20 MYKLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSAGEEAVTLDILPM 79 Query: 77 -SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 + + L+ EA H +S + + + Sbjct: 80 AHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGAMDLSVFHNDHYKRIFYEAL 139 Query: 136 -QIIQQHYRGDDP----LKKKIASVFLESFLFYSGFWLPMYFSSR-GKLTNTADLIRLII 189 + + + Y D P + ++ +E L SG++ + G I + Sbjct: 140 PEAMNRLYTDDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLN 199 Query: 190 RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 DE H + Y Q+ + + +DL +QY DEL+ Sbjct: 200 MDEGRHIQFGLYTIQRLVNEN---------ERYYDLF-------IQYMDELWP------H 237 Query: 250 VKAFLCYNA--NKALMNLGYEPLFPAEMAEVNPAILAALSPNADE 292 V ++ Y K L + +N ++ + + Sbjct: 238 VVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQ 282 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 14/235 (5%) Query: 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD 67 +NW+ ++++ FW P + LS D W+ L +E+ + V + + Sbjct: 20 GLNWSL----FPMKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGE 75 Query: 68 TLQNVIGAPSLMPDAL--TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 + P ++ E L + E+ H ++ F + +D+ Sbjct: 76 EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDAVNVMEDLSTYTKDL 135 Query: 126 EEN------APLQRKAQIIQQHYRGDDPLKKKI-ASVFLESFLFYSGFWLPMYFSS-RGK 177 N L + + + ++ ++ + ++ +E G+ + ++ R Sbjct: 136 SPNYKKIFYEELPKAMWNLSRDPSPENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKI 195 Query: 178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDN 232 L A ++ LI DE+ H + Y + +++ G + L Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGI 250 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 12/246 (4%) Query: 15 SDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVE-QQLTMRVFTGLTLLDTLQNVI 73 ++W + S FW + S D ++T+T E Q++ + + + D++ Sbjct: 55 KFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEFQEILLCTVGCIAIGDSIVLDR 114 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQR 133 A L + +A+ S+ E +H + YS++ Y E Sbjct: 115 IANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLDV----SHRANYYRSEEFKNEYMS 170 Query: 134 KAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEA 193 + + Y + + E LF F Y + +G DL L++RDE Sbjct: 171 VLETLADKYDIGYVQVQMFFIMMCEIILFTPMFQTICYAACKGYCPKLCDLNLLVMRDEY 230 Query: 194 VH---GYYIGYKYQK-NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADD 249 +H +K++ K + E L ++ Y D +Y Sbjct: 231 IHYENARLQSFKFKTKLDRKFARTVLAEFSELTLQLFAKIIG---DYDDGVYNFKHVERH 287 Query: 250 VKAFLC 255 K + Sbjct: 288 FKHVVH 293 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 37/109 (33%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I + + + ++FW ++V LS D W+ L E+ RV D + N Sbjct: 60 PIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNE 119 Query: 73 IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAA 121 + P +E +H+ YS + T + + Sbjct: 120 NLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQKQKKF 168 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 39/149 (26%), Gaps = 28/149 (18%) Query: 192 EAVHGYYIGYKYQKNMEKISLGQREEL-------------KSFAFDLLLELYDNELQYTD 238 E +H + + + + D + +Y Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204 Query: 239 ELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHD 295 E + ++ Y A+ L L ++ ++ NP + + + Sbjct: 205 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIYHSD----NPFDFME-RISIEAKTN 259 Query: 296 FFSGSGSSYVMGKAVETE-------DEDW 317 FF S Y + +E D D+ Sbjct: 260 FFEKRVSEYQKAGVLSSEEGKSFNLDSDF 288 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 4/201 (1%) Query: 22 VWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPD 81 + N N W ++ ++DI + L +FT L+ D N+ L Sbjct: 16 LRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-DQLKQL 74 Query: 82 ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD--VDAAYAWSEENAPLQRKAQIIQ 139 + +E VH+R+Y+ + L D + + ++ K + Sbjct: 75 FPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETKFDWLN 134 Query: 140 QHYRGDDPL-KKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYY 198 ++ + +K + + +E F + F Y + G + LI RDEA+H Sbjct: 135 TKIMENESVPEKYLLMILVEGIFFVASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQA 194 Query: 199 IGYKYQKNMEKISLGQREELK 219 + ++ + E ++ Sbjct: 195 SCCIFNNYLKDHEMPTDERIR 215 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 96/318 (30%), Gaps = 30/318 (9%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNV 72 I D ++ + +NFW E ++DI L + + + LD Sbjct: 32 PIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLNLLSFHINLDNKLIC 91 Query: 73 ---IGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 L+ + A E +H + SS+F Q D + S Sbjct: 92 RPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLFNQQLDTNIV--SSNTLF 149 Query: 130 PLQRKAQIIQQHYRGDD----PLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLI 185 I Y + K+ + V ++ + S L Y L Sbjct: 150 LSSYGMDKIIWLYNECENNKCFFKRVLLLVIMKLLFYCSINILRDYLLKEKLLPTFITAF 209 Query: 186 RLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET- 244 I D +H + ++ + L+S +++ + E Q+ + + Sbjct: 210 DSITNDRIIHTRFAHCTFRLLQN-------KMLESEVLEIIKQALKLEYQFILQYFTIQF 262 Query: 245 --PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA---LSPNADENHDFFSG 299 + +K++L + N L+ GY+ L+ +E + N + + Sbjct: 263 FNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD----IDWLNHPIIDLNIQKQTNKIQK 318 Query: 300 SGSSYVMGKAVETEDEDW 317 + DED+ Sbjct: 319 HNEN----LNDIKFDEDF 332 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 109/318 (34%), Gaps = 42/318 (13%) Query: 7 SAINWNKISDDKDLEVWNRLTSNFWLPEKVP--LSNDIPAWQTLTVVEQQLTMRVFTGLT 64 I+WN + +W + FW P + + D W+T++ E++++ + T + Sbjct: 23 KGIDWNS----YPMRLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFS 78 Query: 65 LLDTLQNVIGAPSLM--PDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAY 122 + + A ++ + E L+ E H ++ ++ KD + Sbjct: 79 AGEEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDTEKWT 138 Query: 123 AWSEE------NAPLQRKAQIIQQHYRGDDPLKKKIASVF-LESFLFYSGFWLPMYFSSR 175 L A ++ + + L+ +F +E +GF+ R Sbjct: 139 TEINPSYYELFYVALPSAAYGVKANPSPESILRFTATYMFSIEGIAAETGFYFWRTMWER 198 Query: 176 GK-LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD------LLLE 228 G+ L ++++ + DE+ H + Y + + + L+ F + L+ Sbjct: 199 GRHLKGIYEIVKRVAADESRHLAFGTYLTTMLIGEDQSLYDKFLEYFNYAGGLAVRLIGT 258 Query: 229 LYDNEL-----------QYTDELYAETPW-------ADDVKAFLCYNANKALMNLGYEPL 270 + + ++ +Y + +Y E A V+ L Y L N E L Sbjct: 259 IVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYAAKMVQHRLFYV--NRLRNANREKL 316 Query: 271 FPAEMAEVNPAILAALSP 288 + E P I + Sbjct: 317 RYMPLNEAAPVIENFDTV 334 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 29/276 (10%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 ++ + W P + + D A L+ VE + + A Sbjct: 24 NEHPKRLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDLA 83 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA--------AYAWSEE 127 P L E+ ++ + EA H + + + + ++ A WS + Sbjct: 84 P-LAVVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEPMADRWSHD 142 Query: 128 N--APLQRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGF-----WLPMYFSSRG 176 + R + + + D + A +E L + + + Sbjct: 143 DYRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETRYSGELEAVP 202 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQY 236 +L + R + RDE H + K +K ++K + + + EL Sbjct: 203 ELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET------IVETIDELVPLVETT 256 Query: 237 TDELYAETPWADD---VKAFLCYNANKALMNLGYEP 269 D++ + D + + ++ L +G P Sbjct: 257 IDQMVRDGSIGADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 18/239 (7%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 S + ++WN + ++ W ++ S D W+ L ++ + + Sbjct: 21 KSTVEGLDWNT----FPMRLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSY 76 Query: 63 LTLLDTLQNVIGAP--SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA 120 + P + M + E L+ + EA H ++ F ++ +T+ + Sbjct: 77 FLAGEECVARDILPLANAMEELGLIEEALYLTQFARDEANHTVAFRKWFESVGETEGIYD 136 Query: 121 AYAWSEE-----NAPLQRKAQIIQQHYRGDDPLKKKIASVFL-ESFLFYSGFWLPMYFSS 174 +E + + + ++ ++ ++ F+ E L +G++ Y Sbjct: 137 FTYKNEPYRRLFYEIIPTDMRRLYNDPSPENIVRAVVSYNFVAEGILAETGYYG--YVKG 194 Query: 175 RGK----LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLEL 229 K L +++LI RDEA H + Y + E + L E+ Sbjct: 195 YEKILPALPGLYKMVKLITRDEARHISFGAYVAALMISMHGDSVLNEFNRYFGQLTQEI 253 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 96/313 (30%), Gaps = 21/313 (6%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + +N+W + D+ + L Q+ + F L + D Sbjct: 43 YAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAVMQFID 102 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSI---------FSTLCQTKDVDAAYAWSE 126 + + + + E +H Y+ + F+T T Y Sbjct: 103 ENDLEWEECTQW--MFKDQGARETIHKIVYNKMLHLADHSSEFTTSMLTSKKYINYILHN 160 Query: 127 ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR 186 + +K ++ + + L K I F E +LF + F + G L N + Sbjct: 161 NSDLKLQKYKLEDEVMKKAAFLIKMI---FCERYLFATPFLVINLMGESGFLNNCVRINM 217 Query: 187 LIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW 246 +++DE VH + ++ K Q +E+ FD+ E + ++ A Sbjct: 218 QVMKDEHVHYLHAVQLFRDL--KPKSDQIDEINKLFFDMAQEFVEIVENMIMKIGAGLES 275 Query: 247 ADD--VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSY 304 + + + G + P I+ + AD+ + + + Y Sbjct: 276 KYKQGFLDHSRFTLHTIYSDCGIDVPQSLAEYTTTPFIVFDKNTGADKF-NLMESNSTVY 334 Query: 305 V--MGKAVETEDE 315 + V + Sbjct: 335 KAVRAQYVPDWNN 347 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 29/267 (10%), Positives = 76/267 (28%), Gaps = 23/267 (8%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLM 79 + W P ++ L D L + + + AP L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 80 PDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA-------AYAWSEENAP-- 130 ++ ++ + E+ H + + + ++ A Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEKWFNEPYDE 138 Query: 131 -LQRKAQIIQQHYRGDDPLKKKIASV----FLESFLFYSGFWLP-MYFSSR----GKLTN 180 +R + + Q D P + A +E L +G++ + + + L Sbjct: 139 LFERNERAMVQLLEEDTPKNRAKAHCHYHLTIEGILAQTGYYGLTLAYGEQEPDLPDLPG 198 Query: 181 TADLIRLIIRDEAVHGYYIGYKYQKNM--EKISLGQREELKSFAFDLLLELYDNELQYTD 238 + ++L+ DE H + + + + ++ + L+ + E + Sbjct: 199 LVEGLKLVRSDEGRHVGFGMAQLKSLVIDGEVDPDVLRDTVDELVPLVQDSLAGEGGAST 258 Query: 239 ELYAETPWADDVKAFLCYNANKALMNL 265 E P D+ + + + + Sbjct: 259 EE-GPGPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 1/92 (1%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 I + E++ + ++FW E+V LS D W+ LT E+ V D + Sbjct: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVL 80 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHAR 103 + M D A +E +H+ Sbjct: 81 ENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 198 YIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYA---ETPWADDVKAFL 254 Y +N+ L + + + ++ + + E ++ + + + + ++ Sbjct: 100 YGFQIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYI 159 Query: 255 CYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVET-- 312 + A++ L LG ++ NP L + +FF Y + + Sbjct: 160 EFVADRLLAALGCGKVYGV----TNPFDWMEL-ISLQGKTNFFEKRVGEYQKASVMSSVH 214 Query: 313 ----EDEDWNF 319 ++D F Sbjct: 215 GNAAFNDDHVF 225 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 80/227 (35%), Gaps = 15/227 (6%) Query: 19 DLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPS 77 +++ W P+++ LS D ++ L + + TG + + P Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 +M A + ++A LS E H + F+ + QT + L +A+ Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHD--TLDERARQ 148 Query: 138 IQQHYRGDDPLKKKIASV--------FLESFLFYSGFWLPMY-FSSRGKLTNTADLIRLI 188 + P +++IA + +E G+ + + G + + I Sbjct: 149 LLSVLDKG-PEEREIAMLEGLVHYQGVIEGIQAMVGYEVFEAVYGQYGLFPGLKEGFKQI 207 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQR-EELKSFAFDLLLELYDNEL 234 RDE H Y + + S +R +EL +L YD E+ Sbjct: 208 KRDEGRHVGYGLRMMKYLSKNPSYAKRIKELFEEFLPKILVRYDQEI 254 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 89/303 (29%), Gaps = 43/303 (14%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT--LQ 70 I + ++ + +FW E + D + F +D L Sbjct: 29 PIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDEKLLDYIEMAFAKRIYIDNTCLD 88 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE---- 126 V+ L+ P S ME ++ + + + + K+ E Sbjct: 89 TVLLTCELLGQVQVPEARGYFSFTMCMENIYKELFMNYVEMIRKNKEKIERTDEVEKKDE 148 Query: 127 ---------------------ENAPLQRKAQIIQQHYRGDDPL-KKKIASVFLESFLFYS 164 E + +++ Y D +K I V ++ S Sbjct: 149 NNLNSKISKEEYEYNLEKKLNELEDFTKMKELVGNFYDEDTLFSEKLIYYVIIKKIFSSS 208 Query: 165 GFWLPMYFSSRG-----KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELK 219 L + FS R T D + I RDE + + K S Sbjct: 209 IHLLRLSFSMRNISESELPTQLCDGLDRIRRDEQYQVEFCLSIAKSMKTKPS-------N 261 Query: 220 SFAFDLLLELYDNELQYTDELYAETPWA---DDVKAFLCYNANKALMNLGYEPLFPAEMA 276 +LL + E + + +D+ AFL +NA++ L++L Y F Sbjct: 262 DQVVNLLEQAIMLEKNFIFSIVDPQVLQIEREDIVAFLLFNADEILVDLKYPRQFNVSNP 321 Query: 277 EVN 279 +N Sbjct: 322 FIN 324 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 1/103 (0%) Query: 35 KVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNI 94 +V LS D+ W+ L E+ V D N + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 95 SFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQRKAQ 136 ME VH+ YS + T + +K + + + +++KA+ Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 83/254 (32%), Gaps = 15/254 (5%) Query: 12 NKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQN 71 N I + W + + W PE++ LS D + ++++ + L + D + Sbjct: 65 NNIEN-ICYNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVL 123 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 + + +S +E H+ YS L + N L Sbjct: 124 QNL-SDVSEIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVYYKSEHFINNEL 182 Query: 132 QRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRD 191 Q + + ++ K + E F F Y G +TA R ++RD Sbjct: 183 YDIQQF-SKKHSTNNLNKIAFFIMICERLYFLPAFVTVAYLGITGYAPHTALGNRYVMRD 241 Query: 192 EAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVK 251 E +H Y + + + K A ++L NE +Y + + + + Sbjct: 242 ENLH-------YNLWRNISANFEYKMNKQEALNIL-----NEFEYILKCTIKNIFKNYSS 289 Query: 252 AFLCYNANKALMNL 265 ++ + L L Sbjct: 290 KDSKFSLDIMLDIL 303 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 27/251 (10%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVV-EQQLTMRVFTGLTLLDTLQN 71 +IS + W R W ++ + D WQ E++ + ++ + Sbjct: 9 QISYEDLYARWERGN---WRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVA 65 Query: 72 VIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPL 131 +P + A ++ L+ EA HA + +C D A + L Sbjct: 66 DNLSPYI-DAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVCDVGDGTMAGGLAAIQPDL 124 Query: 132 Q-RKAQIIQQHYRGDDPLKK-----------KIASVFLESFLFYSGFWLPM-YFSSRGKL 178 ++ + D L++ + + +E+ L SG Y R L Sbjct: 125 TWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHFITGYLEQRDVL 184 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238 +R + DE H + + E K +LL E+ L + Sbjct: 185 PGFYGGMRNVEFDEQRHIGFGVKLLYDLQREDP-----ECKEAVAELLREV----LPWAL 235 Query: 239 ELYAETPWADD 249 ++ W + Sbjct: 236 AVFVPPGWDER 246 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 12/196 (6%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++NR S W + L+ D + L ++ + L + ++ +L Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTL-SALAD 108 Query: 81 DALTPHEEAVLSNISFMEAVHARSY-SSIFSTLCQTKDVDAAYAW--------SEENAPL 131 A + L EA H R + S + + + + L Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDVAGIAAEQLEPHGAMGGESGFGVVYDPLL 168 Query: 132 QRKAQIIQQHYRGDDPLKKKI--ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189 R ++ + + E L +G + +LT ++ + ++ Sbjct: 169 TRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRALRALAKSCELTALSEGLANVV 228 Query: 190 RDEAVHGYYIGYKYQK 205 RDEA H + ++ Sbjct: 229 RDEARHVTFGLAATRR 244 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 20/212 (9%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQNVIG 74 + +W R W + + + D W E+ M + + + Sbjct: 36 YGELYSLWERQ---HWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAEL 92 Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC-----QTKDVDAAYAWSEE-- 127 P LM A L EA H + +S + ++ AA + Sbjct: 93 GP-LMRAAPQEDMRLFLCTQIADEARHVAFFDRFYSEVDVLGVEGLEEKLAATSEHLNPE 151 Query: 128 -----NAPLQRKAQIIQQHYRG-DDPLKKK-IASVFLESFLFYSGFWLPM-YFSSRGKLT 179 + L+ + + + ++ I + +E L +G + Y G L Sbjct: 152 FGVLFDEMLKSRVDRLATEPEDLETLVEAITIYHMVIEGMLALTGQHFIIDYNEREGTLP 211 Query: 180 NTADLIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 + + RDE H + + Sbjct: 212 GFVEGFINVARDEHRHVAFGARFLRDMARSDP 243 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 1/84 (1%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLDTLQN 71 I + +++ + ++FW E++ LS D+ W + E+ V D + N Sbjct: 101 PIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNERHFISHVLAFFAASDGIVN 160 Query: 72 VIGAPSLMPDALTPHEEAVLSNIS 95 + Sbjct: 161 ENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 20/266 (7%) Query: 17 DKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ-TLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 + ++++ R ++ W + S D W+ +T VE++ + + Q + Sbjct: 40 PEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKMTDVERKAFTEIAAAFHHAER-QVEVEL 98 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRK- 134 P M + + L EA H + + + + + Sbjct: 99 PIFM-LTGSEEAKMYLCTQLEDEARHTLFFDRFYREVVGLPGDSVEELLASSFPHVPETF 157 Query: 135 ------AQIIQQHYR--GDDPLKKK----IASVFLESFLFYSGFWLPM-YFSSRGKLTNT 181 + R ++P K+ +++E L + L + Y ++G L Sbjct: 158 VGAFGLLSYLADDLRVDPENPAKRVRYATAYFMWIEGVLALTIMKLTLTYCRTKGYLPGY 217 Query: 182 ADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY 241 RDEA H + + ++++ E ++ +L + L Sbjct: 218 YTGFIASCRDEARHVQFGMRFLRDSVQEDPRLLHEIHETLRTEL---AMNGGASVPAPLE 274 Query: 242 AETPWADDVKAFLCYNANKALMNLGY 267 ++V F+ N L ++G Sbjct: 275 PLGFSEEEVVHFMIRQVNNKLSDVGI 300 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 71/264 (26%), Gaps = 35/264 (13%) Query: 20 LEVWNRLTSNFWLPEKVPLSNDIPAWQTL------TVVEQQLTMRVFTGLTLLDTLQNVI 73 + + W P + L D + + Sbjct: 18 MRYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTED 77 Query: 74 GAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV--------------- 118 AP L + ++ ++ + EA H + + + + Sbjct: 78 LAP-LATALGSIDDQMFVTTQIYEEAKHTDFFDRYWREVIHPVEDALGLDPSSPTDETWF 136 Query: 119 DAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKI-ASVFLESFLFYSGFWLPM------Y 171 + AY + + + + + K + +E L +G++ Sbjct: 137 NDAYEELFDRN--EEAMERLLAAPTAEQFAKAYCHYHLVIEGILAQTGYYGMQQSYSADS 194 Query: 172 FSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAF-DLLLELY 230 + L D I +DE H + K + + +L +LL + Sbjct: 195 YPELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGK--VDPQLLDDIVGELLPLVD 252 Query: 231 DNELQYTDELYAE-TPWADDVKAF 253 D DE + + ++++AF Sbjct: 253 DITTDVGDESFDDVGIPPEELEAF 276 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 79/275 (28%), Gaps = 33/275 (12%) Query: 17 DKDLEVWNRLTSN-FWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 +K E++ + W P+ L+ D W+ + EQ + +G + A Sbjct: 9 EKSYELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEEDVTRTLA 68 Query: 76 PSLMPD---------ALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA-----A 121 P +M T EE L+ + EA H +S F + T++ Sbjct: 69 PYMMALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTAPYREGGY 128 Query: 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASV---------FLESFLFYSGFWLP--- 169 L A + D + + S+ +E+ L G+ Sbjct: 129 QEQGYSTDDLYDTADDLLAAVNSGDRTE-LVYSLGEAYLNYMGIVEAQLARGGYLSFDQM 187 Query: 170 -----MYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD 224 L + I + +DE H + ++ + + + Sbjct: 188 IELKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQLAIAEPDIVADVYEPRMEE 247 Query: 225 LLLELYDNELQYTDELYAETPWADDVKAFLCYNAN 259 + ++ Y D+ + + Y + Sbjct: 248 YVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQD 282 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%) Query: 215 REELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAE 274 ++ L+ + +L L +NE++YT+ +Y E+ +V FL YNAN+AL NLG+E L+ + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGLEKEVVNFLKYNANRALENLGFEKLYTVD 62 Query: 275 MAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDW 317 +NP +L LS + HDFFS G+ Y G E EDED+ Sbjct: 63 A--INPIVLNGLSTET-KTHDFFSTKGNGYQKGVYEELEDEDF 102 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 71/259 (27%), Gaps = 37/259 (14%) Query: 16 DDKDLEVWNRLTSNFWLP-EKVP---LSNDIP---AWQTLTVVEQQLTMRVFTGLTLLDT 68 D + N W P E + + D E + MR + Sbjct: 16 DSVAGGYFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEE 75 Query: 69 LQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW---- 124 AP LM +++ +S+ + EA H + + + + + Sbjct: 76 AVTEDLAP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHPVADARGFERRAPT 134 Query: 125 -----SEENAPLQRKAQIIQQHY---RGDDPLKKKIASV----FLESFLFYSGFWLPM-- 170 + L + + + D P + A +ES L +G+W + Sbjct: 135 DQRFFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTVESVLAQTGYWGIVSS 194 Query: 171 -------YFSSRGK--LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKI--SLGQREELK 219 G L I I DE H + K Q ++ + E Sbjct: 195 MSPRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQSHLAEDGVDESVVRETL 254 Query: 220 SFAFDLLLELYDNELQYTD 238 L+ E + TD Sbjct: 255 QELLPLVAETVSATDEVTD 273 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 88/315 (27%), Gaps = 40/315 (12%) Query: 16 DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGA 75 N W + +D+ + + Q ++ F L + D + + Sbjct: 43 YTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAIGDDKVMDLIS 102 Query: 76 PSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS-----------TLCQTKDVDAAYA- 123 S + + + + ++ + E H Y+ + TL Sbjct: 103 NSDIEWEEST--KWMFADQAARETTHKIVYNRMLELACVSRSYTVNTLTSGDFSHYIMDC 160 Query: 124 WSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTAD 183 + L + ++ +D + + E +LF + F + G + Sbjct: 161 RVLDEFQLPERNEV-------NDKVLFLSTMILCERYLFAAPFLIINLMGESGFINKCVK 213 Query: 184 LIRLIIRDEAVHGYYIGYKYQKN---------MEKISLGQREELKSFAFDLLLELYDNEL 234 + +++DE VH + + ++ G +++++ Sbjct: 214 INMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEINELFRGLSGAFMVLVESMVMKIC---- 269 Query: 235 QYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENH 294 D Y + V + + L EP + P + + ++ Sbjct: 270 --IDLTYQQKIS---VLHHTRFTLRDIFVTLQIEPPPAVVQYTITPFKVFDKNC-GEDKF 323 Query: 295 DFFSGSGSSYVMGKA 309 + + + Y + Sbjct: 324 NLMESTSTVYNASNS 338 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 5/70 (7%) Query: 245 PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSY 304 D + ++ + A++ LM LG + ++ NP L + +FF Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNVA----NPFDWMEL-ISLQGKTNFFEKRVGDY 137 Query: 305 VMGKAVETED 314 + + + Sbjct: 138 QKASVMSSLN 147 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 1/72 (1%) Query: 75 APSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFST-LCQTKDVDAAYAWSEENAPLQR 133 + ME +H+ YS + T + + + + + E +++ Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 134 KAQIIQQHYRGD 145 KA Sbjct: 294 KADWALNWIGNQ 305 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 76/267 (28%), Gaps = 42/267 (15%) Query: 17 DKDLEVWNRLTSNFWLP-EKVPLSND------------------IPAWQTLTVVEQQLTM 57 ++ L ++ + W ++ S D P W + E+ Sbjct: 35 ERLLALYQKGKDKQWDAGTRIDWSLDVPYGRPLGLPDESVALFGTPVWDKMNDRERDEVR 94 Query: 58 RVFT---GLTLLDTLQNVIGAP-SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC 113 R L Q + ++ + + + EA H Y+ Sbjct: 95 RHLASWQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDEARHVEVYARFLH--- 151 Query: 114 QTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFS 173 + N L+ R D P V +E L + F + + Sbjct: 152 -----EKLGLVYPINDHLKALLDQTLSDSRWDIPYLGM--QVLIEG-LALAAFGVLRDLT 203 Query: 174 SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD---LLLELY 230 ++ +++DEA H + + ++S +R E + FA + L+ E Sbjct: 204 PLPLPK---QVLAYVMQDEARHVAFGRLALRDYYRQLSDAERAEREEFAAEGCYLMYERI 260 Query: 231 DNELQYTDELYAETPWADDVK--AFLC 255 + + + VK ++ Sbjct: 261 NGSEVWATLGLDIAESTELVKRSDYMR 287 >UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C58 Length = 423 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 61/275 (22%) Query: 18 KDLEVWNRLTSNFWL-----PEKVPLSNDIPAWQTLTVVEQQLTMRVFTG---LTLLDTL 69 + +++ R S W P ++ ++ D P Q L + LT L+ Sbjct: 85 EMYDLYRRAVSKQWDGNADLPWELDVTPDNPDAQILPRS-FVPFKEIEGFGVRLTALEE- 142 Query: 70 QNVIGAPSLMPD----------------ALTPH------EEAVLSNISFMEAVHARSYSS 107 + A + + E H + Sbjct: 143 --RNLTWDIAAWLLSQFMHGEQGALFASAQVTECVHWTDAKLYGATQVMDEGRHLEVFLR 200 Query: 108 IFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFW 167 T ++ Y ++ L + + K + +E L F Sbjct: 201 YLDT-----KLEKIYTVNDNLFVLIDELMTDGRWD-----FKFLGMQIMIEG-LALGAFT 249 Query: 168 LPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKI-SLGQREELKSFAFD-- 224 + L ++++I+DEA H +Y + ++ + S +R E + + ++ Sbjct: 250 TIFQQTREPLLKQL---LKMVIQDEARHVHYGVLALRDHITQNISEKERREREDWVYEVA 306 Query: 225 -------LLLELYDNELQYTDELYAETPWADDVKA 252 L+ E+Y+ ++ W + Sbjct: 307 LLMRNRFLMHEVYE---EWFSHKVPLKVWDQQMLD 338 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 8/93 (8%) Query: 213 GQREELKSFAFDLLLELYDNELQYTDELYAET---PWADDVKAFLCYNANKALMNLGYEP 269 K+ + + E ++ + A+ + ++ + A++ L+ LGY Sbjct: 22 DWETLTKNEQHFIKNSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAK 81 Query: 270 LFPAEMAEVNPAILAALSPNADENHDFFSGSGS 302 ++ + NP + + +FF Sbjct: 82 IYNSA----NPFDWMTM-ISLQGKTNFFEKRVG 109 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%) Query: 23 WNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMR 58 + + ++FW E++ L D+ W+TLT EQ Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKN 36 >UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT Length = 384 Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 92/282 (32%), Gaps = 56/282 (19%) Query: 9 INWN-KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--------------------- 46 +W+ + E++ R W + +P D+ + Sbjct: 56 FDWSYPADFPEMAELYTRAKQGQWNGDDLPWHTDVDPFNPEVPLLPKSFLAAGDLSQELG 115 Query: 47 -TLTVVEQQ-----LTMRVFTGLTLLDTLQNVIGAPS-LMPDALTPHEEAVLSNISFMEA 99 L+ EQ+ + + + + Q + A + + + + E Sbjct: 116 MLLSPKEQRELAYSVICWMLSQFLHGE--QGALFAAAQVTEAVQFFDGKLYGATQVMDEG 173 Query: 100 VHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLES 159 H ++ + + Y ++ + + +K + +E Sbjct: 174 RHIEVFTRYLD-----QKLGRLYQINDNLFVILDSLMTDSRWD-----MKFLGTQIMIEG 223 Query: 160 FLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNM-EKISLGQREEL 218 L F + + L +L+R++I+DEA H +Y +++ + +S +R+E Sbjct: 224 -LALGAFGVLYKVTGEPLLR---ELLRMVIQDEARHVHYGVLALREHFTKALSERERQER 279 Query: 219 KSFAFDLLL------ELYDNELQYTDELYAETPWADDVKAFL 254 + +AF++ L Y+ ++ + + + F+ Sbjct: 280 EDWAFEVALLMRNRFMAYEVYEEW----FEGRMSREQWRQFI 317 >UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8S2_SALTO Length = 321 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 71/247 (28%), Gaps = 50/247 (20%) Query: 8 AINWN-KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLL 66 +NW+ + +D + + ++ R S W V + D+P + L F Sbjct: 12 TLNWDYEATDPRLMALYERAKSAQWKVSDVDWTVDVPFGEPLPDD------SAFAMAAFA 65 Query: 67 DT---LQNVIGAPSLMPDAL--------------------------TPHEEAVLSNISFM 97 D+ + + + + + Sbjct: 66 DSPLAARGRAAWDDFRWEFQSWMVSQFLHGEQAAMVVAARLVAAVPDLDSKFCAATQAVD 125 Query: 98 EAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFL 157 EA H +S + E + PL+ I R D + + + Sbjct: 126 EARHVEVFSRYL--------REKIPEPYEVSPPLRELLTDILSDSRWD--VTALGMQIMV 175 Query: 158 ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE 217 E+ + F L + N RL+ RDEA H + + +++ +R E Sbjct: 176 EAI-AMASFRLSNSSFHDPLIKNLT---RLVARDEARHVTFGVLSLRGLYGQLTTAERAE 231 Query: 218 LKSFAFD 224 + + Sbjct: 232 REDLVLE 238 >UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G4H5_SORC5 Length = 413 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 77/255 (30%), Gaps = 47/255 (18%) Query: 1 MKLSRISAINWNKISD-DKDLEVWNRLTSNFWLP-EKVPLSN--DIPA------------ 44 + + ++ NW+ D +++ ++ W + S D Sbjct: 84 ISVGYEASFNWSYGRDDPDMARLYHLAKTSQWDAATDLDWSRSVDWLDPAMPLLPDGWMP 143 Query: 45 ------WQTLTVVEQQ-----LTMRVFTGLTLLDTLQNVIGA-PSLMPDALTPHEEAVLS 92 W L+ E+ L + + + Q + A + + + S Sbjct: 144 PSKLPAWGRLSERERATQRHGLLSWMLSQFLHGE--QGALFAASQITECVPSLDAKLYGS 201 Query: 93 NISFMEAVHARSY-SSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKK 151 E H + + + L + +++ + + + Sbjct: 202 TQVADEGRHVEVFHAYLTQKLEKLYEIND--NLYVVIDAIMSDGRWDMKFLGMQ------ 253 Query: 152 IASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEK-I 210 + +E L F +S L D++R +I DEA H +Y + + I Sbjct: 254 ---IMIEG-LALGAFGSIRQVTSEPLLK---DVLRSVITDEARHVHYGVLALSRFYREGI 306 Query: 211 SLGQREELKSFAFDL 225 R E + +AFDL Sbjct: 307 DERARREREDWAFDL 321 >UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Proteobacteria RepID=B4R8K9_PHEZH Length = 367 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 85/266 (31%), Gaps = 48/266 (18%) Query: 6 ISAINWN-KISDDKDLEVWNRLTSNFWLPEKVPLS------------------NDIPAWQ 46 + NW+ + ++ + ++ W ++ + D P W+ Sbjct: 43 TGSYNWDYEAANARIRRLYELGKRFNWN-SELDVDWGLQMPAPEGAPPEPEGFADHPKWK 101 Query: 47 TLTVV-----EQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVH 101 L+ ++ T + + + ++ A L+ A T + ++ +F EA H Sbjct: 102 ALSPEQKADFMRRTTAQTLSQFLHGEQG-ALMVASQLVSCAPTHDAKLYAASQTFDEARH 160 Query: 102 ARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFL 161 + + Y + L K ++ LK + +E L Sbjct: 161 VEVFHRYLM-----ERCHMIYPINPNLKFLLDKVLTDERWD-----LKFIGMQILIEG-L 209 Query: 162 FYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSF 221 + F + L ++ L++RDE H + + + + + EE F Sbjct: 210 ALAAFQTIHETTPDPLLK---QVVGLVMRDEGRHVAFGVNYLEDWIRALPQAEIEERAQF 266 Query: 222 AFD--------LLLELYDNELQYTDE 239 A++ L+ E +T E Sbjct: 267 AYEACVVMKNRLISTNVAEEFGFTRE 292 >UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN9_VARPS Length = 302 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 67/229 (29%), Gaps = 19/229 (8%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLP-EKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + + +KI + + + W P + S+ L ++ ++ Sbjct: 14 NPYPVV--SKIEYPEVWRLCTQARDLAWNPIADIDYSDLQK--ADLPPEVRKAGAEWWSL 69 Query: 63 LTLLDTLQNVIGAPSLMPDA---LTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVD 119 ++ GA L + ++N E H + I L Sbjct: 70 RAWMEHGATPYGAERLREAIFQHQPFEVKQHITNFIAEEFRHHEASFRIADAL------- 122 Query: 120 AAYAWSEENAPLQRKAQIIQQHY-RGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL 178 A E II + + D+ A + + + L + Sbjct: 123 ---AEYEPMPRSDYFKDIIPRFHDESDEKAMSFFAGLSVNTLFEQLSGDLLQARYENARF 179 Query: 179 TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLL 227 + ++ RLI+RDEA H + ++ ++ ++ + L Sbjct: 180 DSIREVCRLILRDEARHIQFGRIIMRRFFSELPSEEKRLIGLKVAKKLR 228 >UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkholderia RepID=B4EPX9_BURCJ Length = 327 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 73/261 (27%), Gaps = 43/261 (16%) Query: 14 ISDDKDLEVWNRLTSNFWL-PEKVPLSND------------------IPAWQTLTVVEQQ 54 + ++ ++ + + W V +D W L +++ Sbjct: 30 LREEALNRLYEKAKAAQWDVATDVDWRHDLDPANPLGMPDPTLLIYGTELWGKLADADKR 89 Query: 55 LTMR-----VFTGLTLLDTLQNVIG-APSLMPDALTPHEEAVLSNISFMEAVHARSYSSI 108 + + + + Q + A L + EA H +Y+ + Sbjct: 90 EVRHHAQGWLLSQILHGE--QAALICASKLASAENGLSARLCAAAQMMDEARHVEAYAKL 147 Query: 109 FSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWL 168 + +D +Y S L + V +E S F Sbjct: 148 V-----NEKLDVSYPMSRSLKGLLH-----DTITSSALDMTNLGMQVLVEGI-ALSIFQS 196 Query: 169 PMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLE 228 + +S+ + DL I RDEA H + ++S + E + F + Sbjct: 197 VVAYSTDPFIK---DLFLRIQRDEARHFAVGRITLCRVYAEMSSHELREREEFICEGA-- 251 Query: 229 LYDNELQYTDELYAETPWADD 249 E D+++ + Sbjct: 252 AVLYEHLCADDIWEPMGLSRR 272 >UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C0R4_DELAS Length = 422 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 39/267 (14%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT---LQNVIGAPS 77 +++ + + W D L + +++ T + + L Sbjct: 160 DLYAQAVAAQWNA---DTDIDWCDAPELPAPVEDAIVQLMTYMVENENAALLVPARFLGQ 216 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 L P +A L+ EA H ++ + A + + A L+ Sbjct: 217 LHPHYR--ELQAALAIQVADEARHIDVFTRRIRR----HGREPALSTAGGQASLKSLLD- 269 Query: 138 IQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL-TNTADLIRLIIRDEAVHG 196 D + + SV E F + F T + RL RDEA H Sbjct: 270 -----ETDFSVAGFLLSVLGEGT-----FVHLLQFLQTEAPDPLTRQICRLAARDEARHV 319 Query: 197 YYIG-YKYQKNMEKISLGQR--EELKSFAFDLLLELYDNELQYTDELY---------AET 244 + + + + + ++ +L NE + + A Sbjct: 320 ALGMSHLLYRLQHEPGFQHQLAQAVEQRFDNLAGTSGLNEEVFDALILIAAGALTPEALA 379 Query: 245 PWADDVKAFLCYNANKA---LMNLGYE 268 A V+ + A+ L+ LG+E Sbjct: 380 RGAARVQQLMRDMADGRFSKLLRLGFE 406 >UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7V6_FRASC Length = 372 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 74/238 (31%), Gaps = 45/238 (18%) Query: 17 DKDLEVWNRLTSNFWLPE-KVPLSND------------------IPAWQTLTVVEQQLTM 57 ++ L +++R W E ++ S+D W+ L E+ Sbjct: 32 EQMLNLYSRGKQRQWDAETQLDWSHDVDPDNPLGLPDEFIWIAGTRVWERLPEAERTTVR 91 Query: 58 RVFT---GLTLLDTLQNVIGAPS-LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLC 113 + L Q + + ++ + + EA H +Y + Sbjct: 92 QHIAGWLYSQFLHGEQGGLVCSAKVVQAVPDIASKFYAATQVMDEARHVEAYQRMLQ--- 148 Query: 114 QTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDD--PLKKKIASVFLESFLFYSGFWLPMY 171 A + + P+ + + + GD + V +E L + F + Sbjct: 149 ---------AKIKVHYPISTGLRGLLEAIIGDSRWDITYLGMQVMIEG-LALAAFSI--- 195 Query: 172 FSSRGKL--TNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLL 227 R ++ L +++DEA H + + ++S + E + FA + Sbjct: 196 --QRDRMRDPLAQALNAYVLQDEARHVAFGRLALRDYYSQLSTAELREREDFAVEACW 251 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 46/151 (30%), Gaps = 14/151 (9%) Query: 77 SLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQ 136 ++ + + + EA HA +Y+ + N L+ Sbjct: 118 RIVESVPDLDSKFYAATQTMDEARHAETYARFL--------QEKVGLAYPINEHLKALLD 169 Query: 137 IIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHG 196 + V +E L + F + +++ ++ +++DEA H Sbjct: 170 --NTLSDSRWDMPYLGMQVLIEG-LALAAFGVMRDITTKPLPK---QILAYVMQDEARHV 223 Query: 197 YYIGYKYQKNMEKISLGQREELKSFAFDLLL 227 + + +++ + E + F + Sbjct: 224 AFGRMALRDYYSQLTETELREREDFVIEGCY 254 >UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTN7_HALO1 Length = 408 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 97/304 (31%), Gaps = 61/304 (20%) Query: 9 INWN-KISDDKDLEVWNRLTSNFWL-----PEKVPLSND-------IPAW---------- 45 NW+ + + E++ R W P + + + + Sbjct: 72 FNWSYPSDNGEMAELYARAKQGQWDGDSYLPWDIDVDPENPERAIIPEQFFAFELLAEFG 131 Query: 46 QTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHE------EAVLSNISFMEA 99 L+ E++ + L L G +LM A + S E Sbjct: 132 VRLSERERRQLLHSMAAWMLSQFLHGEQG--ALMAAAQVTEAVQFFDGKLYGSTQVVDEG 189 Query: 100 VHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLES 159 H + T ++ Y ++ + + +K + +E Sbjct: 190 RHVEVFHRYLDT-----KLEKLYQINDNLFVIIDALMEDSRWD-----MKFLGMQIMVEG 239 Query: 160 FLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEK-ISLGQREEL 218 L F + + L +L+R++I+DEA H +Y +++ + +S +R E Sbjct: 240 -LALGAFGVLYQNTREPLLK---ELLRMVIQDEARHVHYGVLALREHFREALSERERIER 295 Query: 219 KSFAFDLLL------ELYDNELQYTDELYAETPWADDV------KAFLCYNANKA---LM 263 + +AF++ L Y+ ++ + ++ W V + F N+ L Sbjct: 296 EDWAFEVALLMRNRFMAYEVYEEWFEGSFSRDQWRRFVAASPGFEQFRHVMFNRLVPNLR 355 Query: 264 NLGY 267 +G Sbjct: 356 EIGL 359 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVE 52 I E++ + ++FW E+V LS D+ W+ LT E Sbjct: 22 PIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 1/46 (2%) Query: 160 FLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 205 F + RG + LI RDE +H + Y+ Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYKN 50 >UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WBU0_ACTMD Length = 315 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 50/185 (27%), Gaps = 20/185 (10%) Query: 53 QQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYS-SIFST 111 + ++ F T+ + + A S EA HAR + I Sbjct: 69 RDALIQEFAFRTIAEEKVTRALGHLVAA-APNRVMTEFFSTQLLDEARHARVFRDHIIEV 127 Query: 112 LCQTKDVDAAYAWS--EENAPLQRKAQIIQ-QHYRGDDPLKKKIAS--VFLESFLFYSGF 166 +VD + + + R + + + +E L G Sbjct: 128 GVPEAEVDDVITEVAGKAIETVLDPLEAFGVSVIRDQGDFYGGVITLTILVEGVLAPFG- 186 Query: 167 WLPMYFSSRG---KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAF 223 S R A++ R DE H ++++++ + Sbjct: 187 ----ELSERKWVELDPAGAEIERGAGMDEIRHLSVGSSVIKRHLQEQPGE-----RMRVL 237 Query: 224 DLLLE 228 +L+ Sbjct: 238 ELIQR 242 >UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_BURPS Length = 361 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 62/226 (27%), Gaps = 26/226 (11%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 + W KI K ++++ W P +P D T+ ++ F L++ D Sbjct: 47 LEW-KIETPKLYDIYDSARDAGWSPHTLPW--DTLDVNAFTLDQRYAIAYWFALLSVFDG 103 Query: 69 LQNVIGAPSLMPDALTPH---EEAVLSNISFMEAVHARSYSSIFSTLCQT-----KDVDA 120 + A +++ + ++ E H L + A Sbjct: 104 SGPTVFARAMIHTYESKEEDPVRKCFFSVVRDEMNHEEVCGRAIRLLTPDGPLGYEPETA 163 Query: 121 AYAWSEENAPLQRKA--------QIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYF 172 + N Y + S LF+ + Sbjct: 164 LGKLARNNVEWLYYNGSRYWTGFNRAVDKYPLPILFTSFLFGEVASSTLFHGMY------ 217 Query: 173 SSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL 218 + + R I +DE H QK + +++ +E + Sbjct: 218 -QNTTIPVFKEAFRRIGQDEGRHLGICLTVLQKLLPQLTDQDKEMI 262 >UniRef50_Q9DW12 PxORF18 peptide n=1 Tax=Plutella xylostella granulovirus RepID=Q9DW12_9BBAC Length = 313 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 74/248 (29%), Gaps = 46/248 (18%) Query: 31 WLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG---LTLLDTLQNVIGAPSLMPDALTPHE 87 W P ++ + + + ++ + + D LQ + Sbjct: 109 WNPFELNIDK----FH-MEEKMKKYVDSYLSFGVRESCSDLLQ-------FAQEVPVEEV 156 Query: 88 EAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDP 147 + VL++++ + H + + ++ + RK Sbjct: 157 KIVLTHLAERKNRHVLASKRFIT-------------DVIDDVTIDRKNAYTVSGNTAQKL 203 Query: 148 LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNM 207 LK I ++GF L M+++ + + D + Y Y + Sbjct: 204 LKIIIKDCT-----QHTGFILTMHYA--DLDNGLVQFAKHLYDDLKMSTSLCLYVYNNCI 256 Query: 208 EKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGY 267 ++ +E ++ + D E ++ AD + + + + L +L Sbjct: 257 KE------KEPIERVLVMVEDAMDRERRFNHRA-----GADSLSQHVELSLDNMLKSLNI 305 Query: 268 EPLFPAEM 275 P+F E Sbjct: 306 SPVFTKEN 313 >UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteria RepID=B2HNZ6_MYCMM Length = 366 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 71/245 (28%), Gaps = 41/245 (16%) Query: 19 DLEVWNRLTSNFWLPE-KVPLSNDIP------------------AWQTLTVVEQ-----Q 54 L ++ + W + ++ D+ W + Sbjct: 37 LLSLYQKGKDKQWDAQSRIDWGQDVDPMNAIALPDEFHPLFGSPMWNAADEARRSEMRQH 96 Query: 55 LTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQ 114 F+ + + A ++ + + + EA H ++S Sbjct: 97 FQAWQFSQFLHGEQGAM-VCAAKIVEVVPDLDAKFYAATQTMDEARHVEAFSRFL----- 150 Query: 115 TKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSS 174 + N L + R D P V +E L + F + ++ Sbjct: 151 ---QEKIGLVYPINKHLTALLDDTLRDSRWDMPYLGM--QVLIEG-LALAAFGVLRDMAA 204 Query: 175 RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD---LLLELYD 231 L ++ +++DEA H + + ++ +REE + F D L+ + + Sbjct: 205 PESLAK--QVLAYVMQDEARHVAFGRISLKDYYSALTEAEREEREEFVVDACYLMRDRFR 262 Query: 232 NELQY 236 E + Sbjct: 263 GEEVF 267 >UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHF4_9PROT Length = 419 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 76/268 (28%), Gaps = 41/268 (15%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMP 80 +++ + W N+IP + EQ ++ T L + I + Sbjct: 157 KLYEEAKNAQWNATSDIAWNEIPDYD--PKFEQ-AICQIMTYLIENEFSALYIPGKFISQ 213 Query: 81 DALT-PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQ 139 L ++ EA H ++ Y+ S L Sbjct: 214 MNPYYTEIPLFLGSLMNDEARHIEVFTKRVHANGGGMQ----YSSSVTQRSLY------- 262 Query: 140 QHYRGDDPLKKKIASVFL-ESFLFYSGFWLPMYFSSRGKLT--NTADLIRLIIRDEAVHG 196 + DD +K + E F + F + T +++ + RDE+ H Sbjct: 263 SLFNEDDYVKSSFLLHVMGEGT-----FIDLLKFLEE-YMPDATTKKILQYVRRDESRHV 316 Query: 197 YYIGYKYQKNMEKISLGQ---------REELKSF-------AFDLLLELYDNELQYTDEL 240 Y + +E+ R+E + + L + Sbjct: 317 AYGMAHLKSVLEQNPKKINALKEAAFKRKEFMDELNGESTLLLEAMSTLVGGDDSIASYK 376 Query: 241 YAETPWADDVKAFLCYNANKALMNLGYE 268 ++K + N K L+++G + Sbjct: 377 -KGYEAVTELKKRMDINRVKRLVDIGID 403 >UniRef50_C7PXD9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXD9_CATAD Length = 390 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 24/183 (13%) Query: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ---NVIGAPS 77 +++R + W P + D + + + +++ T L + Sbjct: 128 RLYSRAAAEQWDPA---TAIDWASHADVPDEVEDAVVQIMTYLIENEQAALMLPARLLAR 184 Query: 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 L P + + EA H ++ L ++ + A +A + Sbjct: 185 LHPHFR--EVMQLFAVQIADEARHVEVFTR--RALLSRDELGVSGAG--------GRASL 232 Query: 138 IQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKL-TNTADLIRLIIRDEAVHG 196 D L + SV E F + F + TA + L+ RDEA H Sbjct: 233 QTLLDEPDFTLASFLLSVLGEG-----SFLDLLRFLNVHAPDPITATMTSLVGRDEARHV 287 Query: 197 YYI 199 + Sbjct: 288 AFG 290 >UniRef50_D1RDH0 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RDH0_LEGLO Length = 706 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 33/257 (12%) Query: 11 WNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQ 70 WNKI+DD+ ++ NR+ + F + D + L + VF+ + L+ L Sbjct: 22 WNKITDDERKDIKNRVENLFKNGLPFEIKYD-----------KLLYLYVFSLMAQLEVL- 69 Query: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 + + P + + E HA ++ I TLC AY Sbjct: 70 GIQLPMRFEDEMHNPELKKRMRAQLVDEIYHAIVFTKIIFTLCAPYATPPAYNQ-----E 124 Query: 131 LQRKAQIIQQHYRGDDPLK--KKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 ++R + I R D LK + ++ E + + F G +L LI Sbjct: 125 IERLCEFI----RAQDCLKVGMVVMNLVCEGLVEE----VFTIFHKYGV---ATELFELI 173 Query: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD 248 I DE H Y++ E+L++ +LL+ + + +Y D + Sbjct: 174 IEDEHRHVC-EADLYREIGLPDKEILAEKLRA-LEELLISAFSLQPKY-DVALSVLIGPR 230 Query: 249 DVKAFLCYNANKALMNL 265 FL +K + L Sbjct: 231 GTGEFLMALQDKHIRQL 247 >UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=Sulfolobus tokodaii RepID=Q970H5_SULTO Length = 212 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 56/226 (24%), Gaps = 24/226 (10%) Query: 43 PAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA 102 W + ++ + + L + E H Sbjct: 3 KNWFSTPQEIREGIKYLSAHFYPASIMDRWKILKKLSFE-KAKIIANYSLQQVIEEIEHF 61 Query: 103 RSYSSIF-----STLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFL 157 ++ F +T+ + E+ R + I + Sbjct: 62 DFFNEYFKEDPLTTVRLPPSYIKLFDGLVEDFQSSRWRENIATR-----------FHMIT 110 Query: 158 ESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREE 217 E L G + S + L + I+ II DEA H + + Sbjct: 111 EGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSFGLSLI------EDKEYAVK 164 Query: 218 LKSFAFDLLLELYDNELQYTDEL-YAETPWADDVKAFLCYNANKAL 262 F L +++ + L Y+ + ++ NK L Sbjct: 165 RVEELFPLAVQIVKEGKDKIEPLGYSIQELVNLMEELKKARINKIL 210 >UniRef50_B5HTX4 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HTX4_9ACTO Length = 291 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 31/252 (12%) Query: 3 LSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTG 62 + W + + KDL + L S P + LS L+ + ++ +++ Sbjct: 29 YNPYRTFQWPESIEPKDLWMSRELLSVHGTPAEHELSR--EQLIELS---RWESVNLYSL 83 Query: 63 LTLLDTLQNVIGAPSLMPDALTPHEEA---VLSNISFMEAVHARSYSSIFSTLCQTKDVD 119 + +M TP E + E H ++ Sbjct: 84 IAHG----IRELLIEVMRRIHTPGYEIPTPYFHHFIGEENEHMWFFAEFCLRYAG----- 134 Query: 120 AAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLT 179 + + R + + S L G + ++ L Sbjct: 135 ---------RIYPDRRMVFPTDDRSPEMNNFIVFSQIL--IFEQIGDYFNAKMAADENLP 183 Query: 180 NTADLIRLII-RDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQ--Y 236 T + I RDE+ H + G +++ E L D +Q Y Sbjct: 184 ETVREVNRIHHRDESRHIAFGGKLVSALFDEVRRKHSAEEIEEVARYLRGYIDLIIQMLY 243 Query: 237 TDELYAETPWAD 248 + E Y + + Sbjct: 244 SREAYQDAGIPN 255 >UniRef50_A3EVH1 Putative uncharacterized protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EVH1_9BACT Length = 221 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 66/230 (28%), Gaps = 20/230 (8%) Query: 51 VEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFS 110 + Q + T T +D L + A + A T + L++ E +H R Sbjct: 4 HDLQAIGTLLTVYTDIDLLALELCADRIGQ-APTREAKLELAHQVEEERIHFRIQEKWLD 62 Query: 111 TLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPM 170 T+ + + + + +E G L Sbjct: 63 TIGMPFSSPIDPDNRKLIQEIFSRMDWFDFLS---------CLQIGIEGI----GIALVE 109 Query: 171 YFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELY 230 +SR T + + IRDE + + ++ + S ++E L L LY Sbjct: 110 KVASRAD-EGTRASLEIPIRDEKRQTSFGLEELRRLFSEASPTEKERLTERLLGNLNNLY 168 Query: 231 DNELQYTDELYAE-----TPWADDVKAFLCYNANKALMNLGYEPLFPAEM 275 + + E +++ + LG P+ P Sbjct: 169 TMAESFLPIDFEEHWMRLGLSREEMWETVHQKTLDMFRKLGLSPVLPEAF 218 >UniRef50_Q7VG12 Putative uncharacterized protein n=6 Tax=Bacteria RepID=Q7VG12_HELHP Length = 410 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 61/219 (27%), Gaps = 35/219 (15%) Query: 4 SRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLT---VVEQQLTMRVF 60 + I N I L+++ + W + DI WQ + Q ++ Sbjct: 128 NYHFGIESNNIWSSNALQIYEDSKKSQWNA-----TTDIK-WQEIPEFSPALQFAIAQIM 181 Query: 61 TGLTLLD---TLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD 117 T LT + + P +LS+I E+ H S+ Sbjct: 182 TYLTENEFSALYIPARFLGQISPFFTP--IPLLLSSIIGDESRHIESF----------IK 229 Query: 118 VDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGK 177 + + L + + D + + E F + F Sbjct: 230 RANITGLGVQYSTLTTQQSLFSLWNEKDYFKSSFLLHIMGEGT-----FIDLLKFLEES- 283 Query: 178 LTNTAD-----LIRLIIRDEAVHGYYIGYKYQKNMEKIS 211 D L+ L +DE+ H Y ++ + + Sbjct: 284 FRALGDEASAYLLALARKDESRHVAYGINNVKQAIAQNP 322 >UniRef50_B5HTB5 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HTB5_9ACTO Length = 279 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 21/198 (10%) Query: 79 MPDALTPH---EEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKA 135 E++ L + + E VHAR + L D + + + Sbjct: 91 ARWIPRREDLREKSYLLHHASDEVVHARLFKEGVERLGLVWD-----EFDHDKYRIDDID 145 Query: 136 QIIQQHYRGDDPLKKKI-ASVFLESFLFYSGFWLPMYFSSRG--KLTNTADLIRLIIRDE 192 Q ++ + DD ++ I +++ E L A I R+E Sbjct: 146 QRFRRLFESDDEIEVLIGLNLYAEGVLAM---EELHQLGRNKPEYFPEFA----RIEREE 198 Query: 193 AVHGYYIGYKYQKNMEKISLGQREELK--SFAFDLLLELYDNEL-QYTDELYAETPWADD 249 H + ++ +++ +R ++ + + L EL Q + D Sbjct: 199 RRHMGFGLTVAKRLLDEDEDTRRRGIEYCKWYSEHLENYLGGELSQTISWAIGQGFVEAD 258 Query: 250 VKAFLCYNANKALMNLGY 267 ++ + LG Sbjct: 259 YIPRTRARFDETMSKLGL 276 >UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47J53_DECAR Length = 342 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 70/240 (29%), Gaps = 21/240 (8%) Query: 9 INWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDT 68 ++WN K EVW W PEK+P D + T E++ ++ L++ D Sbjct: 26 LSWNS-KTKKLQEVWEASLRENWDPEKLPW--DTLDVDSYTWEERESIAYWWSLLSVFDA 82 Query: 69 LQNVIGAPSLMPDALTPH---EEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS 125 + A +L+ +++ E H + + D + Sbjct: 83 SAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKT 142 Query: 126 EENAPLQRKAQIIQ----------QHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSR 175 + LQ+ + + + L +S + + F S Sbjct: 143 DLGRRLQKNVKWLYFNGSRYWTGYKQAVPKYDLAVLFSSFLMGEIAAATIFKQMFDNSRE 202 Query: 176 GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFD--LLLELYDNE 233 + + I RDE H +++ + + + L L E Sbjct: 203 AVFK---EGFKNIGRDEGRHMAICMAVMERDYPGLKEETKAIVTKQIRAGYLFLSAVLFE 259 >UniRef50_B1Z3F5 Phenylacetic acid catabolic family protein n=3 Tax=Burkholderiaceae RepID=B1Z3F5_BURA4 Length = 228 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 12/159 (7%) Query: 48 LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSS 107 + + L + T + A +E+ V + E H + Sbjct: 1 MPDEYRALATHLMMVHTEGELTGADDYTQVFYNLAPNAYEKFVCCERAAEEVRHYELSAE 60 Query: 108 IFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRG-DDPLKKKIASVFLESFLFYSGF 166 + + L + Q + + RG + +++ I S E+ + Sbjct: 61 VLADLNVDT-------SAMLTQHFQARPYYANELVRGVRNWMERGIFSFLGEAVVLE--- 110 Query: 167 WLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 205 + F + ++ II+DE VH + + Sbjct: 111 -HLLEFQESSYAPFSEIFVKQIIKDEHVHVAHGFRIIRD 148 >UniRef50_A4YGC3 Putative uncharacterized protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGC3_METS5 Length = 209 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 17/168 (10%) Query: 87 EEAVLSNISFMEAVHARSYSSIF--STLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRG 144 E H + S F L + + + + + ++++ G Sbjct: 46 VRGYSPQQYQEELDHFEFFESYFRDDPLSEVELPSSYIDFFD---------ELMKDFESG 96 Query: 145 DDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQ 204 D + E L +G + R LT I+ II DEA H + Sbjct: 97 DIQRIVTRFHLVTEGILATTGLNVLRNAGERYGLTRFTQGIKHIIEDEARHINFGLSLVT 156 Query: 205 KNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKA 252 + + +++ + ++ + L ++ Sbjct: 157 ------DKTFALRRLNEIYPQAVKIVSDGRKHLEALTPFPDIVKMMEE 198 >UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein paaA n=1 Tax=Chromobacterium violaceum RepID=Q7NUN8_CHRVO Length = 259 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 15/199 (7%) Query: 33 PEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLS 92 P +V L ++ + + + S P A E + + Sbjct: 22 PHEVSL----ETIDSMPDEYRDTLIHQLLANGEGELSAGDTYIDSFYPLAPDADERYICA 77 Query: 93 NISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKI 152 + E H R +S + + L D ++ A+ + +R + Sbjct: 78 QFAAEEVDHFRRFSRLLAEL--EVDTSHML-SQKKAERRYFAAESMTTDFRSWEERAAFS 134 Query: 153 ASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISL 212 LE + S L A+ ++++EA H + ++ + Sbjct: 135 FLCELEG------HYQIKEMVSSSYLPLRAEA-EAVLKEEARHFSHGALLMRRAAKDGDA 187 Query: 213 GQREELK-SFAFDLLLELY 230 R + + + ++++ Sbjct: 188 RARAQDALDRLYPMAMDMF 206 >UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q4J6K5_SULAC Length = 342 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 24/230 (10%), Positives = 68/230 (29%), Gaps = 24/230 (10%) Query: 13 KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLD--TL 69 +++ +++ R W + + + W + L ++ + L+ D T Sbjct: 29 DFDNERAWQLYRRAKKEQWDEDNIDWRR-VKEWMSGLDRKQRLAIAYWYGLLSNFDHATP 87 Query: 70 QNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENA 129 L +L+ I++ E H + ++ + Sbjct: 88 VFAYAVVKSFEHHLDTAVRGILTTITWDENRHNLVCGLAIKNAMEGFPLN-----FKPQD 142 Query: 130 PLQRKA----QIIQQHYRGDDPLKKKIASVFLESF-LFYSGFWL--------PMYFSSRG 176 L++KA Q + + G K + + + + ++ F + Sbjct: 143 DLEKKAMLNVQWV--WWNGSRYWKAYLDAYKKYALDVLFTSFMMGEAAATTVFTSMGKNA 200 Query: 177 KLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLL 226 K + + + DE H + +N ++ +++ + Sbjct: 201 KNEEFSKIFKNTAVDETRHYAFTHLIMTQNAPNMNEDRKKLVTKQIRAGF 250 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Query: 245 PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAAL 286 A + ++ + A+ L+ +GYE + E NP Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE----NPFDWMEF 38 >UniRef50_A4ZRB5 Gp34 n=2 Tax=unassigned Autographivirinae RepID=A4ZRB5_9CAUD Length = 239 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 65/267 (24%), Gaps = 40/267 (14%) Query: 27 TSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALT-P 85 W P V + + R T L+ + L + P Sbjct: 10 RKRTWTPVAVDKGQ-------VIDGAEDTLKRCLALRT-LELPVKEMLQQGLERELPDDP 61 Query: 86 HEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGD 145 L + E H + + I + +A + + Sbjct: 62 GIIPALRSNQADEDKHDLALNYIVDAHGVDERAEAEAERI--------RKAWLS------ 107 Query: 146 DPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQK 205 +P + + LE +F F L +F G + + I RDE H Sbjct: 108 NPSHPILKTAILERSVF---FVLLPFFRFNGDM-GIRTVASDISRDEQTHTLIHAMVAHD 163 Query: 206 NMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNL 265 EK + + K+ + + + K F ++ Sbjct: 164 LGEKTTPALDKLRKATVH------------WAMDQLGVSDNKYLNKDFWLRASDNLYHQ- 210 Query: 266 GYEPLFPAEMAEVNPAILAALSPNADE 292 G PA A + N + Sbjct: 211 GKATELVETQRARMPAFFEASNVNLPK 237 >UniRef50_Q1AUS3 Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUS3_RUBXD Length = 224 Score = 40.3 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 35/144 (24%), Gaps = 17/144 (11%) Query: 91 LSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKK 150 LS SF EA H I L R + L Sbjct: 81 LSKHSFQEAQHYEMVGRIIEHLGG--------EVPVTVPESARAWSDLLWDCLDRHRLAA 132 Query: 151 KIASVFLESFLFYSGFWLPMYFSSR--GKLTNTADLIRLIIRDEAVHGYYIGYKYQKNME 208 A E F + S R ++ + + I++DE H + E Sbjct: 133 IAAWNISE-TAAGGSFDATLAASERYQDQMPEAFRVYKQIVKDENFHVGLGQLLLDRYAE 191 Query: 209 KISLGQREELKSFAFDLLLELYDN 232 + + E+ + Sbjct: 192 NDKD------REEILRAMREMVEL 209 >UniRef50_B6VMD5 Putative uncharacterized protein n=2 Tax=Photorhabdus RepID=B6VMD5_PHOAA Length = 298 Score = 40.3 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 19/204 (9%) Query: 31 WLPEKV--------PLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDA 82 W E+V +ND L ++ +R + ++ + L A Sbjct: 22 WFAEQVKVEQRKKTSYANDPK-LTYLPGDLRESLIRELSFKSISEYEATKALL-LLADKA 79 Query: 83 LTPHEEAVLSNISFMEAVHARSYS-----SIFSTLCQTKDVDAAYAWSEENAPLQRKAQI 137 + F E HA+ + F+ + + + L+ Sbjct: 80 PDNINFDYMLTQIFDEGRHAKLFREHLVKIGFADINNVASKMESLLRGKMTNMLETLRTY 139 Query: 138 IQQH--YRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 + + D I +V LE L + R A+ DE H Sbjct: 140 FDKWVVLKNDYIAGVLIITVVLEGVLAPTS--ELSEIKWRPFDIAAAETQARANADELRH 197 Query: 196 GYYIGYKYQKNMEKISLGQREELK 219 + +E ++ L+ Sbjct: 198 LTVCANIVKTAIENDRSLKQPALE 221 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.142 0.403 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,920,695,809 Number of Sequences: 3077464 Number of extensions: 72801773 Number of successful extensions: 237755 Number of sequences better than 1.0e-01: 193 Number of HSP's better than 0.1 without gapping: 301 Number of HSP's successfully gapped in prelim test: 128 Number of HSP's that attempted gapping in prelim test: 236361 Number of HSP's gapped (non-prelim): 472 length of query: 319 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 191 effective length of database: 646,480,964 effective search space: 123477864124 effective search space used: 123477864124 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 93 (40.4 bits)