19/01/2012 07:06:08 : INFO  : Run start: Thu Jan 19 07:06:07 GMT 2012
19/01/2012 07:06:16 : INFO  : Initialised job
19/01/2012 07:06:18 : INFO  : Renaming log file 'phyre2_20120119_070606.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/phyre_20120119_070606.log'
19/01/2012 07:06:20 : INFO  : Initialised job:
Sequence
>batch____
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWE
EEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDA
HTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIMLSAFVIGAYSAYWLWNNNQPK
PFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
MIVMACNKNYNQHEVANCLTLSYREVNRD

19/01/2012 07:06:22 : INFO  : Checked sequence
19/01/2012 07:06:26 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 07:06:28 : INFO  : PSI-BLAST 3 iterations
19/01/2012 07:08:09 : INFO  : PSI-BLAST 5 iterations
19/01/2012 07:10:51 : INFO  : Finished PSI-BLAST
19/01/2012 07:10:54 : INFO  : Running Buildali to generate a3m file
19/01/2012 07:22:03 : INFO  : Converting to HMM
19/01/2012 07:22:09 : INFO  : Calibrating HMM
19/01/2012 07:22:30 : INFO  : Searching HMM database
19/01/2012 07:28:46 : INFO  : Finished buildali
19/01/2012 07:28:50 : INFO  : Predicting secondary structure
19/01/2012 07:29:04 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 07:29:07 : INFO  : Predicting Disordered regions
19/01/2012 07:29:15 : INFO  : Predicted Disorder (Disopred)
19/01/2012 07:29:17 : INFO  : Running memsat_svm check
19/01/2012 07:32:53 : INFO  : Globular protein
19/01/2012 07:32:55 : INFO  : Predicted Transmembrane (memsat_svm) ID '33218586a8d18a30'
19/01/2012 07:32:57 : INFO  : Initialising fold library search
19/01/2012 07:33:03 : INFO  : Initialised search input
19/01/2012 07:33:08 : INFO  : Building Ensemble models
19/01/2012 07:33:16 : INFO  : Building hh.c2zxjB_.model.1.pdb
19/01/2012 07:33:42 : INFO  : Building hh.d1opca_.model.2.pdb
19/01/2012 07:34:05 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/hh.d1opca_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/d1opca_.2.pdb
19/01/2012 07:34:13 : INFO  : Building hh.c2hwvA_.model.3.pdb
19/01/2012 07:34:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/hh.c2hwvA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/c2hwvA_.3.pdb
19/01/2012 07:34:44 : INFO  : Building hh.c2pmuD_.model.4.pdb
19/01/2012 07:35:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/hh.c2pmuD_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/c2pmuD_.4.pdb
19/01/2012 07:35:13 : INFO  : Building hh.c3q9vB_.model.5.pdb
19/01/2012 07:35:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/hh.c3q9vB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/c3q9vB_.5.pdb
19/01/2012 07:35:44 : INFO  : Building hh.d1p2fa1.model.6.pdb
19/01/2012 07:36:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/hh.d1p2fa1.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/33218586a8d18a30/d1p2fa1.6.pdb
19/01/2012 07:36:16 : INFO  : Building c2zxjB_.1.pdb
19/01/2012 07:36:43 : INFO  : Building d1opca_.2.pdb
19/01/2012 07:37:11 : INFO  : Building c2hwvA_.3.pdb
19/01/2012 07:37:38 : INFO  : Building c2pmuD_.4.pdb
19/01/2012 07:38:05 : INFO  : Building c3q9vB_.5.pdb
19/01/2012 07:38:32 : INFO  : Building d1p2fa1.6.pdb
19/01/2012 07:39:03 : INFO  : Building d1gxqa_.7.pdb
19/01/2012 07:39:29 : INFO  : Building c2jzyA_.8.pdb
19/01/2012 07:39:57 : INFO  : Building c2hqnA_.9.pdb
19/01/2012 07:40:24 : INFO  : Building c2k4jA_.10.pdb
19/01/2012 07:40:48 : INFO  : Building d1kgsa1.11.pdb
19/01/2012 07:41:14 : INFO  : Building d1ys7a1.12.pdb
19/01/2012 07:41:40 : INFO  : Building c2oqrA_.13.pdb
19/01/2012 07:42:06 : INFO  : Building c1ys7B_.14.pdb
19/01/2012 07:42:34 : INFO  : Building d2ff4a1.15.pdb
19/01/2012 07:42:58 : INFO  : Building c2hqrA_.16.pdb
19/01/2012 07:43:24 : INFO  : Building c2gwrA_.17.pdb
19/01/2012 07:43:50 : INFO  : Building c1p2fA_.18.pdb
19/01/2012 07:44:15 : INFO  : Building c3r0jA_.19.pdb
19/01/2012 07:44:42 : INFO  : Building c1kgsA_.20.pdb
19/01/2012 07:47:46 : INFO  : Finished HH model building
19/01/2012 07:47:49 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 07:50:57 : INFO  : html domain output complete ID '33218586a8d18a30'
19/01/2012 08:37:21 : INFO  : Run end  : Thu Jan 19 08:37:19 GMT 2012
