Phyre 2 alignment of P38392 with c2ww9B_

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Job Description | P38392
Confidence | 4.66% | Date | Thu Jan 5 11:58:06 GMT 2012
Rank | 79 | Aligned Residues | 26
% Identity | 15% | Template | c2ww9B_
PDB info | PDB header:ribosome | Chain: B: PDB Molecule:protein transport protein sss1; | PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution | 8.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | .
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Query Sequence |  | V | F | K | D | F | L | K | T | G | N | L | I | I | T | S | P | C | R | N | P | V | M | K | K | L | E | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | P | V | E | F | V | R | . | E | G | T | Q | F | L | A | K | C | K | K | P | D | L | K | E | Y | T | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 |  | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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