Phyre 2 alignment of P38392 with d2gmga1

Return to main results | Retrieve Phyre Job Id

Job Description | P38392
Confidence | 10.50% | Date | Thu Jan 5 11:58:06 GMT 2012
Rank | 31 | Aligned Residues | 17
% Identity | 24% | Template | d2gmga1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | PF0610-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | Q | H | Q | S | D | S | A | N | C | S | Y | Y | L | V | T | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | N | I | P | S | R | C | P | K | C | K | S | E | W | I | E | E
Template Known Secondary structure |  | S | S |  |  | S | S |  | S | S | S |  |  |  |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions