Phyre 2 alignment of P38392 with c2v52M_

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Job Description | P38392
Confidence | 4.79% | Date | Thu Jan 5 11:58:06 GMT 2012
Rank | 76 | Aligned Residues | 26
% Identity | 27% | Template | c2v52M_
PDB info | PDB header:structural protein/contractile protein | Chain: M: PDB Molecule:mkl/myocardin-like protein 1; | PDBTitle: structure of mal-rpel2 complexed to g-actin
Resolution | 1.45 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | D | F | L | K | T | G | N | L | I | I | T | S | P | C | R | N | P | V | M | K | K | L | E | R | K | G | I | I | Q | H | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | D | Y | L | K | . | . | . | . | . | . | R | K | I | R | S | R | P | E | R | A | E | L | V | R | M | H | I | L | E | E | T
Template Known Secondary structure |  | S |  |  |  |  | . | . | . | . | . | . |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 115 | . | . | . | . |  |  |  |  |  |  | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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