Phyre 2 alignment of P38392 with d1s58a_

Return to main results | Retrieve Phyre Job Id

Job Description | P38392
Confidence | 15.66% | Date | Thu Jan 5 11:58:06 GMT 2012
Rank | 16 | Aligned Residues | 18
% Identity | 33% | Template | d1s58a_
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins) | ssDNA viruses | Parvoviridae-like VP
Resolution | 3.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | W | L | I | P | K | E | F | T | V | A | F | N | A | Y | T | E | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | F | F | S | P | L | E | F | Q | H | L | I | E | N | Y | G | S | I
Template Known Secondary structure |  |  |  | S |  | T |  |  |  |  |  |  |  |  |  |  | S |  | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions