Phyre 2 alignment of P38392 with c2gslE_

Return to main results | Retrieve Phyre Job Id

Job Description | P38392
Confidence | 7.23% | Date | Thu Jan 5 11:58:06 GMT 2012
Rank | 48 | Aligned Residues | 52
% Identity | 15% | Template | c2gslE_
PDB info | PDB header:structural genomics, unknown function | Chain: E: PDB Molecule:hypothetical protein; | PDBTitle: x-ray crystal structure of protein fn1578 from fusobacterium2 nucleatum. northeast structural genomics consortium target nr1.
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |  |  |  | . | . | 120 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Query Sequence |  | S | F | S | R | L | R | A | H | I | Q | K | H | Y | S | L | L | P | E | Q | R | V | L | L | R | L | S | E | K | E | I | A | V | F | K | D | F | L | K | T | G | N | L | I | I | T | S | P | C | R | N | P | V | . | . | . | M | K | K | L | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | K | A | K | V | N | A | K | Y | Q | S | L | I | . | . | . | . | Y | K | K | I | I | N | D | L | D | E | E | F | K | V | I | G | K | R | A | K | N | S | N | K | . | T | F | P | R | S | C | T | V | X | E | Y | K | E | A | T | A | L | E
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  | . |  |  |  | S | S | S |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 |  |  |  |  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |  | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions