15/01/2012 02:30:37 : INFO  : Run start: Sun Jan 15 02:30:35 GMT 2012
15/01/2012 02:30:46 : INFO  : Initialised job
15/01/2012 02:30:49 : INFO  : Renaming log file 'phyre2_20120115_023034.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/328adb8f7f6504f8/phyre_20120115_023034.log'
15/01/2012 02:30:51 : INFO  : Initialised job:
Sequence
>batch____
MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGY
FQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKL
RHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKV
VEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTV
EKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY

15/01/2012 02:30:54 : INFO  : Checked sequence
15/01/2012 02:31:00 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 02:31:02 : INFO  : PSI-BLAST 3 iterations
15/01/2012 02:32:40 : INFO  : PSI-BLAST 5 iterations
15/01/2012 02:34:54 : INFO  : Finished PSI-BLAST
15/01/2012 02:34:59 : INFO  : Running Buildali to generate a3m file
15/01/2012 02:47:59 : INFO  : Converting to HMM
15/01/2012 02:48:06 : INFO  : Calibrating HMM
15/01/2012 02:48:27 : INFO  : Searching HMM database
15/01/2012 02:54:15 : INFO  : Finished buildali
15/01/2012 02:54:18 : INFO  : Predicting secondary structure
15/01/2012 02:54:32 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 02:54:35 : INFO  : Predicting Disordered regions
15/01/2012 02:54:43 : INFO  : Predicted Disorder (Disopred)
15/01/2012 02:54:46 : INFO  : Running memsat_svm check
15/01/2012 02:58:28 : INFO  : Globular protein
15/01/2012 02:58:30 : INFO  : Predicted Transmembrane (memsat_svm) ID '328adb8f7f6504f8'
15/01/2012 02:58:33 : INFO  : Initialising fold library search
15/01/2012 02:58:40 : INFO  : Initialised search input
15/01/2012 02:58:44 : INFO  : Building Ensemble models
15/01/2012 02:58:50 : INFO  : Building hh.d1mc3a_.model.1.pdb
15/01/2012 02:59:18 : INFO  : Building d1mc3a_.1.pdb
15/01/2012 02:59:44 : INFO  : Building d1h5ra_.2.pdb
15/01/2012 03:00:08 : INFO  : Building d1fxoa_.3.pdb
15/01/2012 03:00:32 : INFO  : Building d1lvwa_.4.pdb
15/01/2012 03:00:56 : INFO  : Building d1iina_.5.pdb
15/01/2012 03:01:19 : INFO  : Building c2pa4B_.6.pdb
15/01/2012 03:01:41 : INFO  : Building c2ux8G_.7.pdb
15/01/2012 03:02:04 : INFO  : Building c2e3dB_.8.pdb
15/01/2012 03:02:28 : INFO  : Building c3hl3A_.9.pdb
15/01/2012 03:02:53 : INFO  : Building c3pnnA_.10.pdb
15/01/2012 03:03:18 : INFO  : Building c3jukA_.11.pdb
15/01/2012 03:03:43 : INFO  : Building c2x5sB_.12.pdb
15/01/2012 03:04:07 : INFO  : Building c1yp3C_.13.pdb
15/01/2012 03:04:31 : INFO  : Building c2cu2A_.14.pdb
15/01/2012 03:04:55 : INFO  : Building d1yp2a2.15.pdb
15/01/2012 03:05:19 : INFO  : Building c3brkX_.16.pdb
15/01/2012 03:05:45 : INFO  : Building c3d98A_.17.pdb
15/01/2012 03:06:07 : INFO  : Building d2cu2a2.18.pdb
15/01/2012 03:06:30 : INFO  : Building c1hm8A_.19.pdb
15/01/2012 03:06:55 : INFO  : Building c2qkxA_.20.pdb
15/01/2012 03:07:44 : INFO  : Finished HH model building
15/01/2012 03:07:47 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 03:08:49 : INFO  : html domain output complete ID '328adb8f7f6504f8'
15/01/2012 04:19:38 : INFO  : Run end  : Sun Jan 15 04:19:35 GMT 2012
