Phyre 2 alignment of P61887 with d1nh9a_

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Job Description | P61887
Confidence | 13.74% | Date | Thu Jan 5 12:07:25 GMT 2012
Rank | 96 | Aligned Residues | 25
% Identity | 36% | Template | d1nh9a_
SCOP info | IF3-like | AlbA-like | DNA-binding protein AlbA
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |  |  | . | . | . | . | . | . | 50 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
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Query Sequence |  | L | P | I | Y | D | K | P | M | I | Y | Y | P | L | S | V | L | M | L | . | . | A | G | I | R | E | I | L | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Sequence |  | V | L | I | G | K | K | P | V | M | N | Y | V | V | A | V | L | T | Q | L | T | S | N | . | D | E | V | I | I
Template Known Secondary structure |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . |  | . | . | . | 30 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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