BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (180 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 336 2e-91 UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 310 1e-83 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 281 7e-75 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 191 1e-47 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 173 3e-42 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 136 4e-31 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 120 3e-26 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 117 1e-25 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 117 2e-25 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 112 7e-24 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 110 2e-23 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 107 2e-22 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 107 2e-22 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 107 2e-22 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 107 3e-22 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 106 3e-22 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 106 3e-22 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 105 5e-22 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 103 2e-21 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 103 2e-21 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 103 3e-21 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 103 4e-21 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 102 4e-21 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 102 6e-21 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 102 6e-21 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 101 9e-21 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 99 4e-20 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 99 6e-20 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 99 8e-20 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 99 9e-20 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 98 1e-19 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 98 2e-19 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 97 2e-19 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 97 2e-19 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 96 4e-19 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 92 8e-18 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 92 8e-18 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 91 2e-17 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 90 3e-17 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 89 8e-17 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 89 9e-17 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 88 1e-16 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 88 1e-16 UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c... 87 3e-16 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 87 3e-16 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 86 6e-16 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 86 6e-16 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 85 1e-15 UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE... 85 1e-15 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 84 2e-15 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 84 2e-15 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 84 2e-15 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 2e-15 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 84 3e-15 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 83 4e-15 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 82 8e-15 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 82 8e-15 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 81 2e-14 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 81 2e-14 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 81 2e-14 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 80 2e-14 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 80 2e-14 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 80 2e-14 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 80 3e-14 UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 79 5e-14 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 79 5e-14 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 79 6e-14 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 79 6e-14 UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C... 79 6e-14 UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca... 79 8e-14 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 78 1e-13 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 77 3e-13 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 77 4e-13 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 76 4e-13 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 76 4e-13 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 76 5e-13 UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp... 76 5e-13 UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 76 6e-13 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 75 7e-13 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 75 9e-13 UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 75 9e-13 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 74 2e-12 UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 74 2e-12 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 74 3e-12 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 73 4e-12 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 73 5e-12 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 73 5e-12 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 72 9e-12 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 71 2e-11 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 71 2e-11 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 71 2e-11 UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria... 70 2e-11 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 70 2e-11 UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatu... 70 4e-11 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 70 4e-11 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 70 4e-11 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 70 4e-11 UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro... 70 4e-11 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 70 5e-11 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 69 7e-11 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 69 7e-11 UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 68 1e-10 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 68 1e-10 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 68 2e-10 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 68 2e-10 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 68 2e-10 UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdeh... 68 2e-10 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 67 2e-10 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 67 2e-10 UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip... 67 3e-10 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 66 4e-10 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 66 6e-10 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 66 6e-10 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 65 7e-10 UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 65 1e-09 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 65 1e-09 UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro... 65 1e-09 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 64 3e-09 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 64 3e-09 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 64 3e-09 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 64 3e-09 UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro... 63 3e-09 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 63 5e-09 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 63 5e-09 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 63 5e-09 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 62 8e-09 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 62 9e-09 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 62 9e-09 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 62 1e-08 UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain pro... 62 1e-08 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 61 2e-08 UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic... 61 2e-08 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 61 2e-08 UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family ... 60 3e-08 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 60 3e-08 UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryot... 60 3e-08 UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro... 60 3e-08 UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain pro... 60 4e-08 UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax... 59 8e-08 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 59 8e-08 UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u... 59 8e-08 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 58 2e-07 UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 58 2e-07 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 58 2e-07 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 57 2e-07 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 57 2e-07 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 57 2e-07 UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain pro... 57 2e-07 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 57 3e-07 UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=... 57 3e-07 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 57 3e-07 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 57 3e-07 UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte... 57 3e-07 UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ... 57 4e-07 UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax... 56 6e-07 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 56 6e-07 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 55 8e-07 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 55 1e-06 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 55 1e-06 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 55 1e-06 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 54 2e-06 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 54 2e-06 UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 53 4e-06 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 53 4e-06 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 53 5e-06 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 53 5e-06 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 53 6e-06 UniRef50_C0QFC7 Fdx4 n=1 Tax=Desulfobacterium autotrophicum HRM2... 52 8e-06 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 52 9e-06 UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subun... 52 1e-05 UniRef50_B1C3X1 Putative uncharacterized protein n=1 Tax=Clostri... 52 1e-05 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 51 2e-05 UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Pro... 51 2e-05 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 50 2e-05 UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminoc... 50 3e-05 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 50 3e-05 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 50 3e-05 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 50 3e-05 UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 50 3e-05 UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim... 50 3e-05 UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibri... 50 3e-05 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 50 3e-05 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 50 4e-05 UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain pro... 50 5e-05 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 50 5e-05 UniRef50_Q8ABR9 F420H2:quinone oxidoreductase n=1 Tax=Bacteroide... 50 5e-05 UniRef50_B9L7Q7 2-oxoacid:acceptor oxidoreductase, delta subunit... 50 5e-05 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 49 5e-05 UniRef50_C3X731 Molybdopterin oxidoreductase n=2 Tax=Oxalobacter... 49 6e-05 UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 49 6e-05 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 49 6e-05 UniRef50_B0AC66 Putative uncharacterized protein n=1 Tax=Clostri... 49 6e-05 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 49 8e-05 UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subun... 49 8e-05 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 49 9e-05 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 49 9e-05 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 49 1e-04 UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 49 1e-04 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 48 1e-04 UniRef50_Q6LJL0 Putative uncharacterized protein n=2 Tax=Photoba... 48 1e-04 UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su... 48 1e-04 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 48 1e-04 UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins... 48 1e-04 UniRef50_C5U814 4Fe-4S ferredoxin iron-sulfur binding domain pro... 48 2e-04 UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone... 48 2e-04 UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subun... 48 2e-04 UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 47 2e-04 UniRef50_D0LLI2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 2e-04 UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 2e-04 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 47 2e-04 UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=... 47 3e-04 UniRef50_Q8TYH6 Probable formylmethanofuran dehydrogenase subuni... 47 3e-04 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 47 3e-04 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 47 3e-04 UniRef50_B6G1K9 Putative uncharacterized protein n=2 Tax=Clostri... 47 3e-04 UniRef50_C0QEM8 HdrA4 n=5 Tax=Bacteria RepID=C0QEM8_DESAH 47 3e-04 UniRef50_A6L2Y7 F420H2-dehydrogenase, beta subunit n=1 Tax=Bacte... 47 3e-04 UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bactero... 47 3e-04 UniRef50_Q8TYJ0 Probable formylmethanofuran dehydrogenase subuni... 47 3e-04 UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 ... 47 3e-04 UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=M... 47 3e-04 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 47 3e-04 UniRef50_C6A249 Pyruvate-formate lyase-activating enzyme n=5 Tax... 47 4e-04 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 47 4e-04 UniRef50_B9K7A1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 4e-04 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 4e-04 UniRef50_A6UV92 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 4e-04 UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=... 47 4e-04 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 47 4e-04 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 46 5e-04 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 46 5e-04 UniRef50_B1L5Y3 Heterodisulfide reductase, subunit A n=2 Tax=cel... 46 5e-04 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 46 5e-04 UniRef50_UPI0001C42000 energy-converting hydrogenase A subunit Q... 46 6e-04 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 46 6e-04 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 46 6e-04 UniRef50_B9CZJ4 Iron-sulfur protein n=2 Tax=Campylobacter RepID=... 46 6e-04 UniRef50_Q466M4 Nitroreductase n=6 Tax=cellular organisms RepID=... 46 7e-04 UniRef50_D0T9V7 F420H2:quinone oxidoreductase n=1 Tax=Bacteroide... 45 8e-04 UniRef50_Q58566 Polyferredoxin protein fwdF n=13 Tax=Methanococc... 45 8e-04 UniRef50_C8X5F1 Nitroreductase n=5 Tax=Deltaproteobacteria RepID... 45 8e-04 UniRef50_C3R5B3 4Fe-4S ferredoxin iron-sulfur binding domain-con... 45 8e-04 UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 45 8e-04 UniRef50_B5YJP4 Conserved domain protein n=1 Tax=Thermodesulfovi... 45 9e-04 UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q... 45 9e-04 UniRef50_Q8TVA8 Archaea-specific flavoprotein n=1 Tax=Methanopyr... 45 9e-04 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 45 0.001 UniRef50_Q469E3 Formylmethanofuran dehydrogenase, subunit F n=4 ... 45 0.001 UniRef50_A8D4D8 Reductive dehalogenase (Fragment) n=6 Tax=Bacter... 45 0.001 UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Meth... 45 0.001 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 161/180 (89%), Positives = 169/180 (93%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MTLKEL +G GT +RSIWMIG+ AF KRETRMYP+ PV PPR+RGRIVLTRDPDG+ERC Sbjct: 1 MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERC 60 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 VACNLCAVACPV CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF Sbjct: 61 VACNLCAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 EMGE+KRQDLVYEK+DLLISGPGKYPEYNFYRMAGMAI GKDKGEAENEAKPIDVK LLP Sbjct: 121 EMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGKDKGEAENEAKPIDVKGLLP 180 >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 147/178 (82%), Positives = 163/178 (91%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + +++ G GTQ+RS+ M+ H F KR+T YPEEPVYLPPRYRGRIVLTRDPDGEERCVA Sbjct: 5 IGDIVKGTGTQLRSLVMVFGHGFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 64 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 CNLCAVACPVGCISLQKAET+DGRWYP+FFRINFSRCIFCGLCEEACPTTAIQLTPDFEM Sbjct: 65 CNLCAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 124 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 E+KRQDLVYEKEDLLISGPGK P+YNFYR+AGMAI GK KG A+NEA+PI+VKSLLP Sbjct: 125 AEFKRQDLVYEKEDLLISGPGKNPDYNFYRVAGMAIAGKPKGSAQNEAEPINVKSLLP 182 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 136/179 (75%), Positives = 158/179 (88%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 T+K+ ++G T VRS+WM+ HA R+T +YPE PV +PPR+RGRI+L+RDPDG+ERCV Sbjct: 4 TIKKTVIGLFTIVRSMWMVNSHALRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACNLCAVACPVGCISLQKAE +DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ+TPDFE Sbjct: 64 ACNLCAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFE 123 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 MGEY RQDLVYEKE LLISGPGKYP+YN+YR+ GMA+ K KG A+NEA PID++SLLP Sbjct: 124 MGEYVRQDLVYEKEHLLISGPGKYPDYNYYRVTGMAVADKPKGAAQNEAAPIDLRSLLP 182 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 94/175 (53%), Positives = 118/175 (67%), Gaps = 1/175 (0%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 ++ F +++ H F + T YPE PRYR RIVLTRDP+G ERCVAC L Sbjct: 11 IITDFKAIATGLFVTWKHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYL 70 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 C+ ACPV CIS++ E +GR Y +FRINFSRCIFCGLC EACPT AIQ+TPD+E+ E Sbjct: 71 CSAACPVDCISMEATEDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICER 130 Query: 126 KRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 +LVYEKEDLLI G GK P YNFYR AG+ + + +G E E +P+D + L+P Sbjct: 131 DIMELVYEKEDLLIDGCGKDPAYNFYRHAGIGVT-QPRGAGEREEEPVDARGLMP 184 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 87/160 (54%), Positives = 105/160 (65%), Gaps = 11/160 (6%) Query: 2 TLKELLVGFGTQVRSI--WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEER 59 L+ +VGF T +R + W + L YPEE LPPR+RGR VLTRDPDG+ER Sbjct: 4 VLRSWIVGFWTTLRQLGRWPVTLS---------YPEEQPQLPPRWRGRPVLTRDPDGDER 54 Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 CVAC LC+ CP CI L+ + DGR Y FRINFSRCI+CGLCEEACPT AIQL + Sbjct: 55 CVACELCSAVCPTQCIELEGDDRPDGRRYARTFRINFSRCIYCGLCEEACPTLAIQLLEE 114 Query: 120 FEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 F G+ +R D VY K LLI GPGK+P Y +Y AG+ I+ Sbjct: 115 FAFGKDRRADFVYHKAALLIDGPGKHPHYRYYDHAGVRIE 154 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 102/186 (54%), Gaps = 28/186 (15%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MTLK L G ++ + F+K T YP+ PV L PR+ GR VLTR P+G E+C Sbjct: 1 MTLKALAQSLGITLK-------YLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKC 53 Query: 61 VACNLCAVACPVGCISLQKAET------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + C+LCA ACP I ++ AE G Y + + IN RCIFCGLCEEACPT AI Sbjct: 54 IGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAI 113 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 L DFEM +Y+ DLVY KED+L+ G P+ + EA+ KP+ Sbjct: 114 VLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQ---------------RREAKRTGKPVK 158 Query: 175 VKSLLP 180 V ++P Sbjct: 159 VGYVVP 164 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 13/138 (9%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + GFG +++ F KR T YPE+P PR+ GR L R PDG E+CV C LC Sbjct: 45 VAGFGVTFKAM-------FKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELC 97 Query: 67 AVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 A ACP I ++ A+ + G Y ++IN++RCI CGLC EACPT A+ +T +F Sbjct: 98 AWACPADAIYVEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEF 157 Query: 121 EMGEYKRQDLVYEKEDLL 138 E+ + R++L+Y K+ LL Sbjct: 158 ELADSTRENLIYTKDQLL 175 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 7/138 (5%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + + H + ++ET YPE+ P +RG +L RD +G E C AC LCAVACP Sbjct: 28 IKGMIITFKHIWKRKETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAE 87 Query: 74 CISLQKAETKDGR-------WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I+++ AE K G Y + IN RCIFCG CEEACP AI LT F YK Sbjct: 88 AITMEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAPANYK 147 Query: 127 RQDLVYEKEDLLISGPGK 144 R+ +Y K+DLLI P + Sbjct: 148 REGFIYGKQDLLIPTPAE 165 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 80/139 (57%), Gaps = 6/139 (4%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 T ++ + ++ HAF T YPEE LP R RGR LT+ DG ERCV C LCA+ CP Sbjct: 10 TMMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCP 69 Query: 72 VGCISLQKAETK------DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 I ++ A + G Y F+IN RCIFCG CEEACPT AI L+ +E+ Y Sbjct: 70 AQAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAY 129 Query: 126 KRQDLVYEKEDLLISGPGK 144 R+D++Y K+ L PG+ Sbjct: 130 TREDMIYTKDRLTEKTPGE 148 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 13/139 (9%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + GFG R+ F T +P E V PRY GR L R PDG E+C+ C LC Sbjct: 58 VAGFGVTFRNF-------FRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELC 110 Query: 67 AVACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 A ACP I ++ +A+ G Y ++IN+ RCIFCG+C EACPT A+ ++ D+ Sbjct: 111 AWACPADAIYVEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDY 170 Query: 121 EMGEYKRQDLVYEKEDLLI 139 E+ + R+DL+YEK++LL+ Sbjct: 171 EIWDDNREDLIYEKDELLV 189 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 82/155 (52%), Gaps = 9/155 (5%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 H F+K+ T YPE YL P +RGR +L RD +G ERC AC LCAVACP IS+ AE Sbjct: 36 HFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAISMVAAER 95 Query: 83 KDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 G Y + +N RCIFCGLCEEACP A+ L D + + +D V + Sbjct: 96 VKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERDQVIWGK 155 Query: 136 DLLISG-PGKYPEYNFYRMAGMAIDGK-DKGEAEN 168 DLL+ +Y + + A+D K GE N Sbjct: 156 DLLVEDMNNRYTREAWTKEEARALDAKRASGEVTN 190 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/137 (43%), Positives = 74/137 (54%), Gaps = 7/137 (5%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLCA 67 FG +R + K YPEE V + PR+RGR L R D + E+CV C+LCA Sbjct: 27 AFGETLRGLKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCA 86 Query: 68 VACPVGCISLQKAET------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACP CI + AE G Y + IN SRCIFCG CE ACP AI + D+E Sbjct: 87 AACPADCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYE 146 Query: 122 MGEYKRQDLVYEKEDLL 138 M +Y R DL++ KE LL Sbjct: 147 MSDYNRDDLIFTKEMLL 163 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 TR YP+EP + R+RG VL DP+ GEE+C AC LCA ACP I++ + Sbjct: 23 TRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVITMTSEPHATKGRH 82 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 P + I RC+FCGLC EACP AIQ++ FE+ R +L+Y+K+ LL G G Y E Sbjct: 83 PVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNLLYDKQRLLELGRGIYDE 141 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 9/135 (6%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 V+ + + H F K+ T YPE+ + P YRG+ +L RD G E C AC LCA++CP Sbjct: 34 VKGLLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAE 93 Query: 74 CISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM--GE 124 I+++ AE K Y E + IN RCIFCGLCEEACP AI LT + Sbjct: 94 AITMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPSN 153 Query: 125 YKRQDLVYEKEDLLI 139 Y+R++ ++ K+ L++ Sbjct: 154 YERENFIFGKDKLVM 168 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 19/144 (13%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + GFG + S+ F T YP E V P RY GR L R DG E+C+ C LC Sbjct: 21 VAGFGVTLGSM-------FRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELC 73 Query: 67 AVACPVGCISLQKAETKD------------GRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 A ACP I ++ A+ D G Y ++IN+ RCIFCGLC EACPT A+ Sbjct: 74 AWACPADAIYVEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRAL 133 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLL 138 ++ D+E+ R ++YEK+DLL Sbjct: 134 TMSNDYELAGPTRAGMIYEKQDLL 157 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 73/123 (59%), Gaps = 2/123 (1%) Query: 23 HAFAKRETRMYPEEPVYLP-PRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE 81 + F+ T YP+ +LP RYRG L RD +GE +CVAC LCA CP CI + E Sbjct: 30 YMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCIEVVPYE 89 Query: 82 TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 + G +P F I+ +RC+FCGLCE+ACP AI L +E + DLV ++DLL + Sbjct: 90 DEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADLVIGRDDLL-AK 148 Query: 142 PGK 144 PGK Sbjct: 149 PGK 151 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 89/178 (50%), Gaps = 20/178 (11%) Query: 1 MTLKELL--VGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 MTLK LL V F ++ + + H F K+ T YP E + L YRG IV R +G+E Sbjct: 1 MTLKSLLKSVLFTEIMQGLKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQE 60 Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEF--------FRINFSRCIFCGLCEEACP 110 RCV C+LC CP I + G +PEF + ++F+RCIFCG C ACP Sbjct: 61 RCVGCDLCEAICPAKAIRVV------GDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACP 114 Query: 111 TTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFY----RMAGMAIDGKDKG 164 A+ +T +F + R+ L+Y K+ LL G E Y M G GKD+G Sbjct: 115 VNALSMTKEFAHSSFTREGLIYSKDQLLALGDRCESESIAYLKVRNMWGAEDSGKDEG 172 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 6/122 (4%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 H + T YPE+ L P YRG L RD G +CVAC +CA ACP CI + A Sbjct: 37 HMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCIDIVAAPA 96 Query: 83 -----KDGR-WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 KDGR YPE F I+ RCI+CG+CEEACP AI+LT +++ R+ +V++KE Sbjct: 97 PADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLTGLSREQMVFDKEK 156 Query: 137 LL 138 LL Sbjct: 157 LL 158 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 78/150 (52%), Gaps = 13/150 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M + + L GF +R + F R T YPEE PPR+ GR VL R PDG E+C Sbjct: 3 MGVLDALGGFRLTLRQV-------FEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKC 55 Query: 61 VACNLCAVACPVGCISLQKAE------TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + C LCA ACP CI ++ A T G + + IN+ RCI C LC EACPT AI Sbjct: 56 IGCELCAGACPARCIYVRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAI 115 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGK 144 + FE R+D +Y K +L++ G Sbjct: 116 TESKMFEFAFTNREDAIYTKAELVVDDEGH 145 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 7/142 (4%) Query: 2 TLKELLVGFG---TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 T++ + FG + ++IW++ + KR+ R E+ P +RG L +D DG Sbjct: 34 TMRHFVENFGRNGSNAKNIWVVQ-YPEQKRDDRPV-EQGGQFRPTFRGVHRLNKDEDGRV 91 Query: 59 RCVACNLCAVACPVGCISLQKAET--KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 RCVAC +CA ACP CI + E+ +D YP+ F I+ RCI+CG+CEEACP AI+L Sbjct: 92 RCVACFMCATACPANCIHIVAEESPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIEL 151 Query: 117 TPDFEMGEYKRQDLVYEKEDLL 138 TP +E+ R +L+++K LL Sbjct: 152 TPHYEVTGLTRAELIFDKSKLL 173 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 71/128 (55%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 67 IRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQ 126 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+Y Sbjct: 127 AITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYN 186 Query: 134 KEDLLISG 141 KE LL +G Sbjct: 187 KEKLLNNG 194 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 6/114 (5%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG---- 85 T YPEE V P YRGR VL ++ DG+ CVAC LC +ACP CI + AE Sbjct: 55 TVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQY 114 Query: 86 -RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 RW PE F I+++ CIFCG CEEACP AI ++ D E+ R+ ++Y KE LL Sbjct: 115 ERW-PEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTKEQLL 167 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 1 MTLKELLVGF--GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 +LK+ L F + + + G +AF + T YPEE L PR+RG L R +GEE Sbjct: 17 FSLKDFLSSFMLSELFKGLALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEE 76 Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 RC+AC LC CP I+++ DG + I+ ++CIFCG CEE+CP +I T Sbjct: 77 RCIACKLCEAICPAMAITIESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETS 136 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 E R DL + K+ LL G P+ Sbjct: 137 ILEYHGESRSDLYFTKDMLLAVGDRYEPQ 165 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 11/149 (7%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL-----PPRYRGRIVLTRDPDGEERCV 61 L G + + + F YP+ P L R+RG VL RD +G E+CV Sbjct: 4 LRNIGAIAKGMGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 AC LCA ACP CI ++ AE + Y + + I+++RCIFCG C EACPT AI Sbjct: 64 ACFLCAAACPSNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDAIT 123 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGK 144 FE+ + +LVY KE LL P Sbjct: 124 HGHGFELATFNASNLVYRKEQLLSGKPAH 152 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 66/109 (60%) Query: 33 YPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFF 92 YP E L PR+RG L R P GEERC+AC LC CP I+++ E +DG + Sbjct: 135 YPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRY 194 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 I+ ++CI+CG C+EACP AI P+FE ++L+Y+KE LL +G Sbjct: 195 DIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENG 243 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 70/127 (55%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 66 RGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQA 125 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+Y K Sbjct: 126 ITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 185 Query: 135 EDLLISG 141 E LL +G Sbjct: 186 EKLLNNG 192 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 66/112 (58%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP E + PR+RG L R P GEERC+AC LC CP I+++ E DG Sbjct: 117 TIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERIDGSRRT 176 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 + I+ ++CI+CG C+E+CP AI TP+ E R++L+Y KE LL +G Sbjct: 177 YKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREELLYNKEKLLENG 228 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 6/135 (4%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 ++ L G T + ++ H + T YPE L PR+RG + DG+ +CVA Sbjct: 4 IRSTLAGMATTFKH--LVDPH----KVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVA 57 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C LC CP CI L E + G YP F I+ RCIFCG C+E CP AI L +E Sbjct: 58 CGLCPTVCPANCIKLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYEN 117 Query: 123 GEYKRQDLVYEKEDL 137 EY R VY+ E L Sbjct: 118 AEYDRASFVYDLERL 132 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 71/127 (55%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 R +++ + F + T YP E L R+RG L + +GEERC+AC LC CP Sbjct: 25 RGMYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQA 84 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 I+++ E DG + I+ ++CI+CG C+EACP AI P+FE R++L+Y K Sbjct: 85 ITIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREELMYNK 144 Query: 135 EDLLISG 141 LL +G Sbjct: 145 SKLLHNG 151 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 11/126 (8%) Query: 25 FAKRETRMYPEEP-----VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 F E YP+ P L R+RG VL RD +G E+CVAC LCA ACP CI ++ Sbjct: 44 FQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCAAACPSNCIYIEA 103 Query: 80 AETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 A+ + Y + + I+++RCIFCG C EACPT AI FE+ +++ Sbjct: 104 ADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELASMHATNMIMR 163 Query: 134 KEDLLI 139 KED+L+ Sbjct: 164 KEDMLV 169 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 H F K T YP+E P +RG L + + +CV C LC CP CI+++ E Sbjct: 15 HMFMKPVTLQYPDERPTPSPNFRGLHAL-KVSHSKAKCVCCYLCPTVCPAKCITVEAGED 73 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 ++ Y E + I+ RCIFCG C EACP A+++T +FE+ YKR+D V+ KE LL Sbjct: 74 QEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVFVKERLL 129 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 4/113 (3%) Query: 30 TRMYPEE--PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET--KDG 85 T YPEE + P YRG L +D +G +CVAC LCA ACP CI + AE+ D Sbjct: 48 TVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHCIDIVAAESPWSDR 107 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 YP+ F I+ RCI+CG+CEEACP AI+LT + + R+++V++KE LL Sbjct: 108 DKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEMVFDKEKLL 160 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 83/174 (47%), Gaps = 20/174 (11%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + ++L G T R H K++T YPE+ +PP YRG L +DP+G E+CV+ Sbjct: 19 IPQILGGLKTTFR-------HLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVS 71 Query: 63 CNLCAVACPVGCISLQKAE------TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C LC CP I + E T P F I+ RCI+CG+C+E CP AI L Sbjct: 72 CQLCEFVCPPKAIRIWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFL 131 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEA 170 + M Y R ++V K+ L G G P+ +F D K E N+A Sbjct: 132 QQQYTMTGYTRAEMVNNKQRLYELG-GTLPDQHF------KWDKKKAAELHNKA 178 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 6/127 (4%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET-- 82 F K T YP PR+RGR L +G E CV C LC VACP I++Q AE Sbjct: 19 FRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAITVQAAENDP 78 Query: 83 ----KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 G Y ++++ RCIFCG+CEEACPT + LT +FE+ ++ R+ L+ +KE L+ Sbjct: 79 DNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFELADFTRESLILQKEQLV 138 Query: 139 ISGPGKY 145 P + Sbjct: 139 NRNPSGF 145 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 3/137 (2%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 L +L G T ++ + + L K T YPEE PR++G VLT DG RC A Sbjct: 15 LPGILGGLATTMKHL-LKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTA 73 Query: 63 CNLCAVACPVGCISLQKAETKDGRW--YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 C LCA CP CI + AE D +P + I+ RC+FCG CEEACP AI+L P++ Sbjct: 74 CMLCATNCPAECIKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEW 133 Query: 121 EMGEYKRQDLVYEKEDL 137 + + +Y+ L Sbjct: 134 QTPGVNGANFIYDINHL 150 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 11/140 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAK--RETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCV 61 EL VG +W++ + F + T YP E +PPRYRG L R G ERC+ Sbjct: 31 ELFVG-------LWVVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCI 83 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 C LC C CI+++ + DGR + + IN RC++CGLC + CP AI ++E Sbjct: 84 GCGLCEKICVANCIAMETSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYE 143 Query: 122 MGEYKRQDLVYEKEDLLISG 141 + +R + KEDLLI G Sbjct: 144 LASEQRAYYGF-KEDLLIRG 162 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 9/150 (6%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 +L G + + + F K T YPE + R+RGR L R +G ERC+ C+L Sbjct: 1 MLKGTMAYFKGLKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSL 60 Query: 66 CAVACPVGCISLQKAET------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 CA ACP I + + G + + IN RCIFCG CE+ACPT AI L Sbjct: 61 CAAACPADAIYVVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQ 120 Query: 120 FEMGEYKRQDLVYEKEDLLIS---GPGKYP 146 +E+ Y R+ +Y ++ LL++ G G+ P Sbjct: 121 YELAFYDRRASIYTQDMLLVAVDKGHGEVP 150 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 11/163 (6%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDP-DGEERCVACNLCAVACPVGCISLQKAETK 83 F+K T YP E + +RGR L RDP +++C+ C C CP CI +++ +T+ Sbjct: 27 FSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCIYIKREKTE 86 Query: 84 DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPG 143 + ++ I+ SRCIFC C EACP A+ LT DFE Y R +L++ KE LL + Sbjct: 87 NKMVVTDYI-IDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLIFNKEQLLKNWDE 145 Query: 144 KYPEYN-------FYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 ++ F++ G ID + + E KPI +K ++ Sbjct: 146 FASKWTRDVYFNKFWQPPG--IDPSRWPKTKREQKPIPIKRVI 186 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 9/141 (6%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLT-RDPDGEER 59 + L E+L G G R I FA T YP+ P +RGR VL RD ER Sbjct: 19 LYLPEVLKGLGYTFRQI-------FAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGER 71 Query: 60 CVACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CVAC LC+ CP IS+Q ET+ + +P F IN RCI+CG CEE CP AI ++ Sbjct: 72 CVACGLCSRVCPPMAISIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSD 131 Query: 119 DFEMGEYKRQDLVYEKEDLLI 139 ++++ R++ + +K LL+ Sbjct: 132 EYDITFNNRENAIMDKSKLLV 152 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 10/156 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 FGT+ + ++ + T YPEE P YRG L DG+ RCVAC +CA Sbjct: 38 FGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATI 97 Query: 70 CPVGCISLQKAETKDG---------RWYPEFFRINFSRCIFCGLCEEACPTTAIQL-TPD 119 CP CI ++ E +D YP F I+ RCI CGLC +ACP AI++ T Sbjct: 98 CPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYT 157 Query: 120 FEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAG 155 EY RQ+ VY+ LL P +P + + G Sbjct: 158 HTPPEYTRQNFVYDIPKLLKGAPVSHPSDPWNKREG 193 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 1/117 (0%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPVGCISLQKAE 81 H F K T+ YP+E + +RGR L RD + G RCVAC CA CP CI ++ Sbjct: 30 HMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCIRIRSHR 89 Query: 82 TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 + DG + + I+ RCI+CG C E CP AI LT + RQ+ V+++ LL Sbjct: 90 SVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFVFDEAHLL 146 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%) Query: 1 MTLKELLVGFGTQVRSIWMI------GLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDP 54 MT+ E L F +R +W GL + + T YPE + YR + L P Sbjct: 9 MTVIERLYIFEA-IRGLWTTLKHAARGLFRYEELPTISYPEGQPEIRNTYRAKHRLMLRP 67 Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR--INFSRCIFCGLCEEACPTT 112 DG RCVAC +CA ACP CI ++ ++ D R R I+ C+FCGLC EACP Sbjct: 68 DGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEKRVMRFDIDHLTCVFCGLCAEACPVD 127 Query: 113 AIQLTPDFEMGEYK-RQDLVYEKEDLLISGPGKYPEYNFYRMA 154 A+++ + E++ R+D V DL P YP +MA Sbjct: 128 ALRMDTKQIIFEHRSREDFVAHLYDLTNWDPKDYPNDEQSQMA 170 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPV 72 +R + H F + T YPEE PR+RG L DP+ GE CVAC LCA CP Sbjct: 75 IRGFLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPT 134 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 C+ + +++G F + RC+FCGLC + CP AI ++ ++E R+ L+Y Sbjct: 135 SCLEMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIY 194 Query: 133 EKEDLLISG 141 K +L G Sbjct: 195 VKTELAAIG 203 >UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUZ9_SORC5 Length = 224 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 7/126 (5%) Query: 22 LHAFAKRETRM-YPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKA 80 LHA T + YPEE P R+RG LT D RCVAC C+ ACP CI+++ A Sbjct: 67 LHALEPGVTTISYPEEKRPYPERFRGIHRLTLREDNSPRCVACLCCSTACPAQCIAIEPA 126 Query: 81 ETKDG------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 E DG YP F I+ RC+FCG C EACP AI++ Y ++ + Sbjct: 127 EYPDGDRRKGYERYPSSFVIDELRCVFCGFCVEACPVDAIRMDTGLHAVPYDSREQFIYR 186 Query: 135 EDLLIS 140 DLL+S Sbjct: 187 RDLLMS 192 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 7/136 (5%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEERC 60 +K LL G GT + + + G F + T YPE L PR+RGR+++ D +G +C Sbjct: 9 IKGLLHGIGTLLTGMKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNKC 68 Query: 61 VACNLCAVACPVGCI-----SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 +AC LC +ACP I S+ ET + + + C+FC LC ACP AI+ Sbjct: 69 IACGLCQMACPNDTITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIR 128 Query: 116 LTPDFEMGEYKRQDLV 131 +FE + R LV Sbjct: 129 FDTEFENAVFDRSKLV 144 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 3/132 (2%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 +KE+++G + + + + F + T YP E +P R+RG I L D +G RCVA Sbjct: 5 IKEIVLGLWSLIVGMRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVA 64 Query: 63 CNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 C +C ACP GCI + E +G + + ++F++C CG C E+C AIQ + + Sbjct: 65 CGMCVRACPSGCIKVS-GEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVY 123 Query: 121 EMGEYKRQDLVY 132 K++D Y Sbjct: 124 NHVSTKKEDFYY 135 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 4/121 (3%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK---DGR 86 T YP LP YRG + L R D E+CV C+LC ACP I + AE R Sbjct: 33 TLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVIRVVSAEVPGEPTKR 92 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYP 146 + E++ ++ +RC+FCGLC +ACP A+ ++ +FE Y ++ L KE LL G +P Sbjct: 93 FAKEYY-MDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLHLNKEQLLAIGDRAFP 151 Query: 147 E 147 E Sbjct: 152 E 152 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 17/137 (12%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + L+ G G ++S+ +K+ T YP+EP +P R+RG D C+ Sbjct: 1 MNGLVQGLGVTLKSM-------VSKKVTTSYPDEPFLMPDRFRGIQHFIPD-----LCIV 48 Query: 63 CNLCAVACPVGCISLQKAETKD----GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CN CA CP CI+L D G+ + F +NF CI C LC E CPT AI +T Sbjct: 49 CNQCARICPTDCITLTGKPNPDPAKKGKVI-DTFDLNFEICILCDLCTEVCPTEAIVMTN 107 Query: 119 DFEMGEYKRQDLVYEKE 135 FE+ Y R DL + E Sbjct: 108 HFELSAYSRDDLFKDVE 124 >UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP4_9GAMM Length = 134 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 2/131 (1%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + + +G+ CV C LCA CP CI++ E + G P+ F I+ +RC++CGLCE+AC Sbjct: 1 MKTNDEGDVNCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDAC 60 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRM-AGMAIDGKDKGEAEN 168 P AI+L ++E+ + LV ED LI+ P K E + A +A DG K A+ Sbjct: 61 PADAIKLGQEYEVATTTTEALVVHLED-LIAAPRKAEEGAGTVIPASLAKDGSGKTIAQA 119 Query: 169 EAKPIDVKSLL 179 K D LL Sbjct: 120 NVKGYDWWQLL 130 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 13/128 (10%) Query: 23 HAFA-----KRETRMYPEEP--VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 HA A K+ T YPEE LP YRG L D G ERCV+C LC CP I Sbjct: 32 HAIAILRGKKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAI 91 Query: 76 SLQKAETKDGR-WY-----PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 ++ E W P F I+ RCI+CG+CEE CP AI L D+ + R + Sbjct: 92 TIIPEEIPSTDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAE 151 Query: 130 LVYEKEDL 137 +V++K+ L Sbjct: 152 MVHDKKKL 159 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEE---PVYLPPRYRGRIVLTRDPDGEER 59 +K L VG T ++ F + T YPE +++ PR+RGR+V RD +G R Sbjct: 16 VKTLGVGLKTTLKEY-------FTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHR 68 Query: 60 CVACNLCAVACPVGCISL-----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 CVAC +C ACP I + ET + + ++ + C+FC LC AC AI Sbjct: 69 CVACTMCEKACPNDTIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAI 128 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 + T DFE + R LV + + G G P Sbjct: 129 EFTNDFEHAVFDRSKLVLHLDKEVYDG-GSLPH 160 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 19/150 (12%) Query: 30 TRMYPEE-PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YPEE RGR +LT DG+ +CV+CN+CA CP CI +Q A + ++ Sbjct: 49 TAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYCIEIQSAADFNDPFH 108 Query: 89 ---PEFFRINFSRCIFCGLCEEACPTTAIQL---TPDFEMGEYKRQDLVYEKEDLLISGP 142 P+ F I++SRCIFCG C EACP AI++ TP+F + R+++ + +DLL+ Sbjct: 109 PKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKDTPNFP--GFDRENM-WATQDLLM--- 162 Query: 143 GKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 N+ + A G+A E P Sbjct: 163 ------NWQPASDAAKSYPGSGQAHQEVHP 186 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 10/133 (7%) Query: 30 TRMYPEE--PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 T YPE +LP YRG VL + DG ERCV+C LC CP I++ ++G W Sbjct: 55 TMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGPW 114 Query: 88 -----YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG- 141 P F+I+ RCI+CG+CEEACP AI ++ ++ + ++ K L G Sbjct: 115 GKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLYELGG 174 Query: 142 --PGKYPEYNFYR 152 G ++N Y+ Sbjct: 175 TRKGLVNKWNQYK 187 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 5/112 (4%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE---TKDG 85 +T YP+E + R+RG+ ++ +GE C+ CNLCA+ACP I+++ TK Sbjct: 32 QTEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLIAMKSDRDPVTKKK 91 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 + + SRC+FCGLCEEACPT +++L +EM Y R+ +V +++ L Sbjct: 92 VMVTYVY--DVSRCMFCGLCEEACPTQSLKLGTGYEMALYSREGMVLDRKVL 141 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 3/147 (2%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG--RW 87 T YPEE P YRG L DG+ RCVAC +CA CP CI ++ AE D Sbjct: 61 TLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEK 120 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQL-TPDFEMGEYKRQDLVYEKEDLLISGPGKYP 146 YP F I+ RCI CG C EACP AI++ + + Y+R +++++ LL P Y Sbjct: 121 YPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERSAQIWDEKRLLRGPPVSYQ 180 Query: 147 EYNFYRMAGMAIDGKDKGEAENEAKPI 173 + R +I E AKP Sbjct: 181 YDPWLRRGSPSIPPDKLEEMRARAKPF 207 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVAC 63 +++ G G ++ F+K T YP E L PRYR L R G ERC+ C Sbjct: 45 DIIKGLGLTIKEF-------FSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGC 97 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI + E +DGR + + IN RCI+CGLC E CP AI + FE Sbjct: 98 GLCEKICTSNCIRILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENA 157 Query: 124 EYKRQDLVYEKEDLL 138 +R KED L Sbjct: 158 SEQRAHFGL-KEDFL 171 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 10/108 (9%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE----T 82 K+ T YP +P+ LP R+RG + P E+C+ CN C+ CP CI L + T Sbjct: 18 KKVTYDYPNQPLPLPDRFRG--IQKFYP---EKCIVCNQCSNICPTDCIQLTGKKHPDPT 72 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 K G+ + + INF CI C LC E CPT AI +T +FE+ EY R DL Sbjct: 73 KKGKII-DTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDL 119 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%) Query: 8 VGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCA 67 +G G + I + T YPE+ R+RG + RD G ERC +C C Sbjct: 26 IGKGLWITLKHFIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCM 85 Query: 68 VACPVGCISLQKAET--KDGRWYPE-----FFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 CP I ++ E + +PE F I+ RCIFCG+CEEACP AI L Sbjct: 86 WICPADAIYIEAGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPG 145 Query: 121 EMGEYKRQDLVYEKEDLL--ISGP 142 EM R+DL+ KE ++ + GP Sbjct: 146 EMATDNREDLILTKERMMQIVGGP 169 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 ++++L GF + + + + G A T YP E + +P R+RG I L DP+ G+ RC Sbjct: 7 IRDVLSGFKSLLIGMRITGREAAKPILTVQYPRETLKMPARFRGHIQLILDPETGKPRCT 66 Query: 62 ACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC LC ACP CI L + D + + ++F++C CG C E CP+ AI+ + + Sbjct: 67 ACTLCEKACPSECIDLDGLRREGDKKKSVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQY 126 Query: 121 EMGEYKRQDL 130 + R+ Sbjct: 127 NVVSLGREQF 136 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 11/131 (8%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACN 64 L+VG ++++ F+ T YP + + + P YRG I L +D + G +C+ C Sbjct: 15 LIVGLKVTLKAL-------FSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCG 67 Query: 65 LCAVACPVGCISL--QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C CP CI + +K E G+ +F ++F++C CG C E CPT A+ + ++E+ Sbjct: 68 SCMRECPSDCIVVDGEKREGVKGKVLTKF-TLDFTKCSLCGACVEVCPTDALDYSNEYEL 126 Query: 123 GEYKRQDLVYE 133 +KR+D Y+ Sbjct: 127 AGFKREDFHYD 137 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 66/137 (48%), Gaps = 11/137 (8%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 EL +G +W++ K T +YP E L RYRG L R + G ERC+ Sbjct: 31 ELFIG-------LWVVLREMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCI 83 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 C LC C CI ++ DGR + INF RC++CGLC + CP AI D+E Sbjct: 84 GCGLCEKICVSNCIRMETTLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYE 143 Query: 122 MGEYKRQDLVYEKEDLL 138 +R + K+DLL Sbjct: 144 FASEQRAFFGF-KKDLL 159 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 13/137 (9%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPE--EPVYLPPRYRGRIVLTRDPDGEERC 60 +K L VG T +R + F K+ T+ YPE + + + R+RG +V+ + + E +C Sbjct: 14 VKTLAVGLRTTMREL-------FTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKC 66 Query: 61 VACNLCAVACPVGCISL--QKAETKDGRWYPEFFR--INFSRCIFCGLCEEACPTTAIQL 116 V C LC +ACP I++ + T DG+ + R N C+FC LC ACP AI Sbjct: 67 VGCGLCMMACPNNSINVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAITF 126 Query: 117 TPDFEMGEYKRQDLVYE 133 FE + R L+ + Sbjct: 127 DQSFENAVFDRSKLILQ 143 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 13/130 (10%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K L+ G G ++ H F + T YPE + +P R+ GR D +C Sbjct: 1 MHGKGLIKGLGVTIK-------HFFKPKVTVQYPEVRLPIPERFFGRPQFFYD-----KC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +ACN C ACP I L+ +T D + + + C+FCG+C+EACP AI+ + DF Sbjct: 49 IACNQCVNACPNNVIKLE-TDTVDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDF 107 Query: 121 EMGEYKRQDL 130 E+ +Y R D+ Sbjct: 108 ELTQYNRPDI 117 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 12/144 (8%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERC 60 T K ++ G G R + F T YPE+ +PP +RG VL D GE +C Sbjct: 13 TGKSIVTGLGITFREM------MFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKC 66 Query: 61 VACNLCAVACPVGCISL---QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 +C CA ACPV I++ Q ETK + + F I+ SRC+ C C EACP ++ + Sbjct: 67 TSCMQCAQACPVNVITIEWHQDPETK--KKVCDRFAIDMSRCMLCNFCVEACPFDSLVMG 124 Query: 118 PDFEMGEYKRQDLVYEKEDLLISG 141 D+E+ + ++LV+E EDLL G Sbjct: 125 YDYELCKVNPENLVFEFEDLLRLG 148 >UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1 Length = 204 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG--R 86 ET YPEE P R RG L + DG RCVAC C CP CI++ AET D Sbjct: 71 ETLSYPEEKEPYPERNRGLHRLMQREDGAARCVACMCCPTVCPANCITIIPAETDDQGIE 130 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY-KRQDLVYEKEDLLISG 141 YP F I+ RC+ CGLC E+CP AI++ +R D + K+ LL G Sbjct: 131 KYPAVFEIDELRCVVCGLCVESCPCDAIRMDTGIHAPPVEERGDGIMVKDQLLDLG 186 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 12/133 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G G ++ M+G + T YPE LP R + L +PD +C Sbjct: 1 MLGKGLLTGMGIVLKK--MLGPNI-----TEFYPEVMPNLPKTVRSSMGL--EPD---KC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 ++C LCA+ACP I+L + ++ + + + ++ RC+FCGLC EACPT A+ +T +F Sbjct: 49 ISCTLCALACPNKVITLTSEKDENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEF 108 Query: 121 EMGEYKRQDLVYE 133 E + +DL ++ Sbjct: 109 ENSVFYPEDLYWD 121 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 LL G + +W K T YPE LPPR+ G L E+C+AC L Sbjct: 9 LLKGLAITFKELW-------KKPVTLEYPEHKEKLPPRFHGSFTL-----HSEKCIACGL 56 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 C ACP I + + ++ + + + C+FCGLC EACPT A+ ++E+ +Y Sbjct: 57 CQQACPNKVIKVGSIKDENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKY 116 Query: 126 KRQD--LVYEKEDLLISGPG 143 + +D L K + + +G G Sbjct: 117 RIEDIKLTLFKREEITTGEG 136 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 8/124 (6%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVAC 63 +L G G ++ F+ T YP E + L PRYR L R D G ERC+ C Sbjct: 33 DLFKGLGLTIKEF-------FSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGC 85 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI + + +D R + + IN RCI+CGLC E CP AI + FE Sbjct: 86 GLCEKICTSNCIRIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENA 145 Query: 124 EYKR 127 +R Sbjct: 146 STQR 149 >UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3 Length = 427 Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 19/151 (12%) Query: 1 MTLKELLVGFGTQVR-SIWMIGLHAFAKRE---TRMYPEEPVYLPPRYRGRIVLTRDPDG 56 +TLK V G + + + ++ F ++ T +YP E + +P GR L + D Sbjct: 24 LTLKHFFVSIGVKRKPQVGVMDADYFTHKDGIVTNLYPHESIPVP--DNGRYRLHNEVDD 81 Query: 57 EERCVACNLCAVACPVGCISLQK-------AETKDG---RWYPEFFRINFSRCIFCGLCE 106 C+ C+LCA CPV CI ++ +T DG R Y F I+ ++C FCGLC Sbjct: 82 ---CIVCDLCAKVCPVNCIEIEPIKSPVEIGKTSDGSTKRIYAATFDIDMAKCCFCGLCT 138 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 CPT + +T ++ EY +++VY +L Sbjct: 139 TVCPTECLTMTKTYDFSEYDVRNMVYHFAEL 169 >UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae RepID=NUOI_CAMFF Length = 165 Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 33 YPEE-PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR-WYPE 90 YPE+ P + RYRG LT++ G+ +CVAC++CA ACP CI + E + + P Sbjct: 50 YPEQKPTDITNRYRGLHRLTKNEKGDLKCVACDMCATACPANCIFITATEIEGSKEKAPS 109 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQL 116 F I+ C+FCGLC EACP AI++ Sbjct: 110 KFTIDLLECVFCGLCVEACPKDAIRM 135 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 64/135 (47%), Gaps = 7/135 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVAC 63 EL VG +R + A K YP E V L RYR L R + E ERC+ C Sbjct: 32 ELFVGLFVMMRELLKRNNSATIK-----YPFEKVKLDNRYRAVHRLMRFIESENERCIGC 86 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ + ++GR E + IN RCI+CG C E CP AI ++E Sbjct: 87 GLCEKICISNCIRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENA 146 Query: 124 EYKRQDLVYEKEDLL 138 +R Y K+D L Sbjct: 147 AEQRSYFGY-KQDFL 160 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 17/133 (12%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 +L G G ++ H F K+ TR YPE +P R RG + + D RC++C Sbjct: 8 ILKGMGITLK-------HLFEKKITRQYPEYKREMPERTRGMLTVDMD-----RCISCLQ 55 Query: 66 CAVACPVGCISL-QKAETKDG----RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 C CP CI++ Q DG R Y F I+ SRC++C LC E CP I T +F Sbjct: 56 CMRVCPDHCITIVQDRRDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEF 115 Query: 121 EMGEYKRQDLVYE 133 E+ Y R DL + Sbjct: 116 EIQAYNRLDLARQ 128 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 6/115 (5%) Query: 25 FAKRETRMYPE--EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL--QKA 80 F K+ T YPE + + + R+RG + + + + E RCVAC LC +ACP I++ + Sbjct: 33 FRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQIACPNDTITVTSETI 92 Query: 81 ETKDGRWYPEF--FRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 ET+DG+ + + C+FC LC ACP AI +FE + R LV + Sbjct: 93 ETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAITFDQNFEHAVFDRTKLVLQ 147 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 62/134 (46%), Gaps = 7/134 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVAC 63 EL VG + + +H T YP E + L RYR L R D G ERC+ C Sbjct: 31 ELFVGLWLVFKELCKAQIH------TVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGC 84 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ + +D R + INF RCI+CGLC E CP AI +E Sbjct: 85 GLCEKICVANCIRMETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENA 144 Query: 124 EYKRQDLVYEKEDL 137 +R +K+ L Sbjct: 145 CEQRASFALKKDML 158 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 L E+L G + H F K T YP E + R+RG + DG +CV Sbjct: 11 LTEILKGLSITLS-------HMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVG 63 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C LC CP CI ++ +G + ++ SRCI+CG CEE CP AI + ++ Sbjct: 64 CYLCQKVCPSECIHIETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNT 123 Query: 123 GEYKRQDLVYEKEDL 137 + R + V + L Sbjct: 124 VDSNRDNYVINMKTL 138 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Query: 30 TRMYPE--EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 T YPE + + + RYRGR+ + D DG C AC +C ACP I++ + G+ Sbjct: 44 TEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPNASINVLATKNIAGKK 103 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + +F+ C CGLC EACP AI+++P FE+ DL Sbjct: 104 VLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146 >UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THF2_9MICO Length = 184 Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 22/145 (15%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 L +L G T ++ A T YP+ LPPR RG I L EE C + Sbjct: 10 LPGILKGLATTAKT-------AMKPVHTHEYPDVAPDLPPRSRGVIALL-----EENCTS 57 Query: 63 CNLCAVACPVGCISLQK------AETKDGRWYP----EFFRINFSRCIFCGLCEEACPTT 112 C LCA CP CI ++ A T+ GR + F I+FS C++CG+C E CP Sbjct: 58 CMLCARECPDWCIYIESHKETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFD 117 Query: 113 AIQLTPDFEMGEYKRQDLVYEKEDL 137 A+ +P FE E DL+++K+ L Sbjct: 118 ALFWSPQFEYAETSILDLLHDKDRL 142 >UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Actinomycetales RepID=D2PVJ5_9ACTO Length = 214 Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 15/118 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI----------SLQK 79 T YP+ LPPR RG I L EE C +C LCA CP CI S+ + Sbjct: 25 TEQYPDVQPELPPRSRGVIALM-----EENCTSCMLCARECPSWCIYIDSHTETAPSVGE 79 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 + R + F I+FS C++CG+C EACP A+ +P+FE E ++L +EK+ L Sbjct: 80 QARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEFEYAETDLRNLTHEKDRL 137 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 2/133 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 LKE+L G + V + + T YP E V L P +RG I L D G +C+ Sbjct: 4 LKEILEGGWSLVEGMRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCI 63 Query: 62 ACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC C CP I +Q + + G + I+F+RC CG+C E+CPT +Q + ++ Sbjct: 64 ACGTCERMCPSNVIKVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEY 123 Query: 121 EMGEYKRQDLVYE 133 E+ R D V + Sbjct: 124 ELAGESRWDGVID 136 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 10/125 (8%) Query: 14 VRSIWMIGLHAF-AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++S+ HA ++ T YPEE + PR+RG + +ERC+ C C CP Sbjct: 5 LKSMATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFS-----QERCIWCRQCENVCPN 59 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + + ++G E + ++ +CI+C LCEE CP AI LT +FE + DL Y Sbjct: 60 DTIQIVTDDMRNG----EQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLAY 115 Query: 133 EKEDL 137 KE L Sbjct: 116 NKEQL 120 >UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B4K6_STRRD Length = 417 Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 18/135 (13%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 V+ + + H ++ T+ YPE LPPR RG I L EE C C LCA CP Sbjct: 10 VKGLSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALV-----EENCTVCMLCARECPDW 64 Query: 74 CISLQKAETKDGRWYPEF-----------FRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 CI + K+ PE F I+FS C++CG+C E CP A+ +P+FE Sbjct: 65 CIYIDS--HKETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEY 122 Query: 123 GEYKRQDLVYEKEDL 137 E ++LV+EK+ L Sbjct: 123 AEGDIRNLVHEKDKL 137 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 9/104 (8%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP +P + +RG+ L D +C+ C C +ACP ++++ R + Sbjct: 15 TTKYPFKPYEVDDDFRGKPELNSD-----QCIVCAACTMACPANALTMRTDPVTGDRTWS 69 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 F RCIFCG CEE CPT AI+LT DFE+ +QDL E Sbjct: 70 LFL----GRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQE 109 >UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16 Tax=Actinomycetales RepID=C7Q2E0_CATAD Length = 531 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 22/142 (15%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 L G T ++++ + T YP+ LPPR RG I L EE C +C L Sbjct: 42 LAKGLATTLKTMTHRSV-------TAQYPDVKPELPPRSRGVIALL-----EENCTSCML 89 Query: 66 CAVACPVGCI----------SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 CA CP CI + + + R + F I++S C++CG+C EACP A+ Sbjct: 90 CARECPDWCIYIDSHKEVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALF 149 Query: 116 LTPDFEMGEYKRQDLVYEKEDL 137 +P+FE E+ DL++EK+ L Sbjct: 150 WSPEFEYAEFDIVDLLHEKDRL 171 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 18/128 (14%) Query: 23 HAFAKRE---TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 H F K++ T +P++ + +P R ++ + D C+ C+LCA ACPV CI + Sbjct: 41 HYFDKQDGVATVQFPKQKMPIPEVARYQLEVEIDD-----CIVCDLCAKACPVDCIDILS 95 Query: 80 -------AETKDG---RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 +T DG R Y E F I+ ++C++CGLC CPT I +T ++ K D Sbjct: 96 IKSPEAIGKTSDGSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTD 155 Query: 130 LVYEKEDL 137 L+Y D+ Sbjct: 156 LIYGFSDM 163 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 16/152 (10%) Query: 2 TLKELLVGFGTQVRSIWM---IGLHAFAKRETRM-YPEE---PV--YLPPRYRGRIVLTR 52 T++ V+S W I L A+R T + YP+ PV LPPRYRG + + Sbjct: 4 TVRAYTGAIRDTVKSFWHGLSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEV-- 61 Query: 53 DPDGEERCVACNLCAVACPVGCI--SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 C C C ACP+GCI SL+K + F I+ ++C+FCGLC E CP Sbjct: 62 ---DSGICTGCQACERACPIGCIQISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCP 118 Query: 111 TTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 T +IQ T +FE ++LV+ D + P Sbjct: 119 TGSIQHTREFEGTHKHIRNLVFRWADPMNPFP 150 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 14/114 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG---- 85 TRMYPE+ L R+RG +L + +C+ C +CA CP I + KA G Sbjct: 19 TRMYPEKQSELSDRFRGLQILDK-----SKCIGCGICANTCPNAAIKIVKAPIAPGSTKQ 73 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG--EYKRQDLVYEKEDL 137 RW+P+ I+ C+FCGLC + CP A+ ++ G ++K +DL+ E L Sbjct: 74 RWFPQ---IDIGHCLFCGLCIDQCPKGALSSGKEYAKGLVKWKHKDLLITPEKL 124 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 17/127 (13%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 ++I G H+ T YP P+ + +RG+ DP E+C+AC C ACP Sbjct: 6 KTIAKAGTHS-----TIQYPFAPLEVCDDFRGKP--EHDP---EQCIACAACTQACPANA 55 Query: 75 ISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 + ++ E RW I+F+RCI+CG CEE CPT AI L+ +FE+ + DL YE Sbjct: 56 LIMETDTENNLRRW-----EISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADL-YE 109 Query: 134 KEDLLIS 140 + + ++ Sbjct: 110 EANFTLA 116 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 22/150 (14%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYP-EEPVYLPPRYRGRIVLTRDPDGEER 59 M LK +L+GF + F K TRMYP +E Y+ + R R +L D R Sbjct: 1 MVLKAVLLGFK-----------YLFKKPYTRMYPYKEEAYVTSKTRARHILYMD-----R 44 Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTP 118 C+ C C +ACP I + E + + F I++SRC +CGLC EACP A+ +T Sbjct: 45 CIGCRACQLACPADAIKMYHVEGDYPKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMT- 103 Query: 119 DFEMGEYKRQD---LVYEKEDLLISGPGKY 145 ++ M +D +Y E L GKY Sbjct: 104 NYTMEHLITEDKATTLYTPEMLAKPPEGKY 133 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 13/117 (11%) Query: 21 GLHAFAK--RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 G+ F K R T YP+E + LP YRG I L +D C+ C LCA+ CP + Sbjct: 29 GIKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKD-----VCIGCTLCAMVCPADAM--- 80 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 K T G+ +P IN+ RC+FC C + CP A++ T + R++L++ E Sbjct: 81 KMVTDQGKKFPT---INYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPE 134 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 11/106 (10%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 +R T YPEE + LP YRG I L +D C+ C LCA+ CP + K T+ G+ Sbjct: 34 QRITLKYPEEAISLPTGYRGMIRLYKDI-----CIGCTLCALICPADAM---KMTTEAGK 85 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 P IN+ RC+FCG C + CP A++ T + R+DLV+ Sbjct: 86 KLPV---INYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVF 128 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPE--EPVYLPPRYRGRIVLTRDPDGEERC 60 +K LL G + LH+ T+ YP+ E + + R+RG +++ D + RC Sbjct: 11 IKTLLTGMSVTGKYF----LHSRKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHRC 66 Query: 61 VACNLCAVACPVGCISL-----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 C C +ACP G I + ET + + F + S C CGLC + CPT AI+ Sbjct: 67 TGCQKCEIACPNGTIEIIWDRGIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIK 126 Query: 116 LTPDFEMGEYKRQDLV 131 +FE Y R L Sbjct: 127 WGQNFENSVYDRTALT 142 >UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5 Length = 189 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEE---RCVACNLCAVACPVGCISLQKAETKD-- 84 T YPEE LP R L D D E RCV+C++C CP CI+++K+ K Sbjct: 29 TVQYPEERHPLPEASRVFPFLLYDGDDAEKGLRCVSCHICEKECPPHCITIEKSTDKKPD 88 Query: 85 ----GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD-LVYEKEDL 137 ++YP F I+ S C+ C +C E CP AI++ FE+ R D L++ KE L Sbjct: 89 YVGKSQFYPAVFNIDVSVCMSCQICVEVCPFDAIRMDTAFELSTSDRFDGLLWTKEQL 146 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 H F T YPEE + + R RG V+ +E C+AC CA ACPV I+++ + Sbjct: 21 HLFRPWITVQYPEEKLAMSKRIRGNQVIWV----KETCIACLACARACPVKAINMEVSRG 76 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPT-TAIQLTPDFEMGEYK 126 +D + + I+F CIFCGLC E+CPT AI + +E Y+ Sbjct: 77 EDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYR 121 >UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR62_AZOPC Length = 152 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEE--PVYLPPRYRGRIVLTRDPDGEERC 60 +K ++ G V+ +++ L+ K+ T YPE+ V+ R RG++V++ + + +C Sbjct: 4 IKNIIKGIWHLVQGMYITMLNFLRKKVTEQYPEDRAKVFRYERMRGQLVMSHNEKNQHKC 63 Query: 61 VACNLCAVACPVGCI------SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C +C CP G I L + K+ + ++ + C FC +C +CP AI Sbjct: 64 TVCGICQANCPNGTIRIITKKELDEVTEKEKKTLDKYI-YDIGSCTFCSICTISCPQNAI 122 Query: 115 QLTPDFEMGEYKRQDL 130 T +FE + R L Sbjct: 123 LWTTNFEHATFTRSKL 138 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G +W+ F K+ T YP+ L R+RG + + +C Sbjct: 1 MQGKGLLTG-------MWVTLKEFFRKKVTEEYPDVMPDLGDRFRGGTLKLQ----TSKC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC +C ACP G I L ++ + + + C+FC LC +ACP I T +F Sbjct: 50 IACGICQNACPNGSIKLTSVRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEF 109 Query: 121 EMGEYKRQDLVYE 133 Y R+DLV++ Sbjct: 110 AFSGYSREDLVFD 122 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 23/155 (14%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP +P+ + +RG+ P + E+C+AC C +ACP ++++ K R + Sbjct: 15 TVKYPFKPLEVSHGFRGK------PQYDAEQCIACGACTMACPANALTMETDIIKGTRQW 68 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS-------- 140 F RCIFCG CEE CPT AI L+ +FE+ + + DL Y+ ++ Sbjct: 69 QLFL----GRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADL-YQHATFTLAHCQQCQKP 123 Query: 141 -GPGKYPEYNFYRM--AGMAIDGKDKGEAENEAKP 172 P K +Y + +GM ID ++ E P Sbjct: 124 FAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCP 158 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 11/108 (10%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG 85 A R T YP P+ PPR+RGR + DG +C+ C CA CP I + A + Sbjct: 14 AGRVTLPYPFVPLKAPPRFRGRPTI----DGA-KCIGCGACAEVCPPRLIEVNDAAST-- 66 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 +N+SRC +C C+E CPT A+ T DFEM R++L Sbjct: 67 ----RTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVS 110 >UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY43_CHLT3 Length = 268 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 21/119 (17%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK---------- 79 T YP E V P R R+ D C+ C+ CA ACPV CI++ Sbjct: 52 TLQYPSEAVPTPSFARYRLHNEID-----DCIGCDQCAKACPVKCITIGSFKATPDDIEI 106 Query: 80 -AETKDGR----WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 T DG W P F I+ +C+FCGLC CPT + +TP + E+ R+ L+Y Sbjct: 107 LGTTSDGTKKRLWIP-VFDIDMGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLIYH 164 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 15/121 (12%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET---- 82 K T YP+ LPPR RG I L EE C C LCA CP CI + + Sbjct: 23 KTVTAQYPDAQPELPPRSRGVIGLF-----EENCTVCMLCARECPDWCIYIDSHKETVPP 77 Query: 83 ------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 + R + F I+FS C++CG+C E CP A+ +P+FE E +L +E++ Sbjct: 78 AAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHELTHERDK 137 Query: 137 L 137 L Sbjct: 138 L 138 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 10/109 (9%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 + T YP EP +P +RG+ T E C+ C C +ACP I L+ ET+D R Sbjct: 13 KATYAYPFEPYIVPENFRGQPNYTY-----ELCIGCAACGIACPSNAIELKMNETQD-RL 66 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG-EYKRQDLVYEKE 135 EF + RCIFCG C+E CPT A++L+ FE+ ++ + L+ E Sbjct: 67 VWEF---DCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGE 112 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 14/146 (9%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP EP+ + +RG+ ++C+ C C ACP ++++ + G Sbjct: 15 TSSYPLEPIAVDKNFRGK-----PEQNPQQCIGCAACVNACPSNALTVE-TDLATGELAW 68 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG-----PGK 144 EF N CIFCG CEE CPT AI+L+ ++E+ +K++D + + L + P Sbjct: 69 EF---NLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPFA 125 Query: 145 YPEYNFYRMAGMAIDGKDKGEAENEA 170 + Y +A + +G + E E+ Sbjct: 126 VQKEIDYAIALLKHNGDSRAENHRES 151 >UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0 Length = 202 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 18/126 (14%) Query: 30 TRMYPEEPVYLPPRYRGR----IVLTRDP-------------DGEERCVACNLCAVACPV 72 T YP+E + P R+RG+ + ++P G+ RCVAC +C ACP+ Sbjct: 41 TTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKGKSRCVACYMCQTACPM 100 Query: 73 GCI-SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 + ++ + DG F +N C+FCGLC +ACP + ++ EM Y+R V Sbjct: 101 PTLFRIEAVQMPDGTKKVVRFDMNLLNCLFCGLCVDACPVECLTMSDIHEMAVYRRSQAV 160 Query: 132 YEKEDL 137 +D+ Sbjct: 161 IHMDDM 166 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP EP + +RG+ C+ C C VACP IS++ +DG+ + Sbjct: 14 TSKYPYEPYIVEEHFRGKPTYHYT-----NCIGCAACGVACPSNAISVK---WEDGKKFI 65 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG-EYKRQDLVYEKE 135 ++ R N RCIFCG C+E CPT AI+L+ D+E+ ++ + L+ E E Sbjct: 66 KW-RYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGE 111 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 V+ + + T +PE L YRG L + C++C CA CP Sbjct: 3 VKPLINVAKEVLKPPSTLEFPENRENLTDNYRGIHKL-----DMKTCISCAACARICPNQ 57 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 I + ET D + + IN RC+FC LCEE CPT + LT D+ Y R+D + Sbjct: 58 TIDMVDTETPD-KGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKR 116 Query: 134 KEDL 137 EDL Sbjct: 117 PEDL 120 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 9/101 (8%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP +PV + +RG+ RC+ C CA ACP I++ + G Sbjct: 15 TVEYPFKPVEVAQGFRGKPAYDFS-----RCIGCGACATACPSNAITMD-CDLDRG---I 65 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + + IN+ RCIFCG CEE CPT AI L+ +FE+ K++D+ Sbjct: 66 KSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDM 106 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 5/122 (4%) Query: 10 FGTQVRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 FG + + +I L F R T YP+E + + R+RG LT D + RC+AC LCA+ Sbjct: 2 FGKGLLTGMLITLKRFFGRPNTVQYPDEKLPMTARFRGG-ALTLDIN---RCIACGLCAM 57 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 ACP I L + + + + C++C LC EACP A+ ++E Y RQ Sbjct: 58 ACPNQAIGLATTVDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNYEAACYLRQ 117 Query: 129 DL 130 +L Sbjct: 118 NL 119 >UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdehydrogenase i subunit i 2) (Ndh-1 subunit i 2) n=4 Tax=Hydrogenothermaceae RepID=C0QTC6_PERMH Length = 233 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 28/143 (19%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRG-----RIVLTRDPD---------------GEERCVA 62 H F K T +P E V PR+RG + T PD GE RC+ Sbjct: 36 HLFRKVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPEMGETRCIG 95 Query: 63 CNLCAVACPVGCISLQKAETKD--------GRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C ACPV I K E D G F ++ +C+FCGLC ACPT I Sbjct: 96 CKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCTLACPTACI 155 Query: 115 QLTPDFEMGEYKRQDLVYEKEDL 137 T +++ Y R+ V +KE L Sbjct: 156 IHTDIYDLSSYTRRGWVLDKEKL 178 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 18 WMIGL-HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC-I 75 +MI L H T YP E + R+RGRI D +C+AC +C CP+ + Sbjct: 26 FMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFD-----KCIACEVCVRVCPIDLPV 80 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 K ET + + I+F CIFCG C E CPT + +T ++E Y R +L Y + Sbjct: 81 VDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHELNYNQI 140 Query: 136 DL 137 L Sbjct: 141 AL 142 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 35/153 (22%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++++ +G F K T YPEE +P R+R RI L+ E C+ C LC CP Sbjct: 25 EIQTMYHVGKFIFKKPVTIQYPEEKGDIPERFRYRIFLS-----PESCIGCTLCQQICPN 79 Query: 73 GCISLQ--------------------KAETKDGRW-YPEFFRINFSRCIFCGLCEEACPT 111 I ++ + ++ R YP+ +NF C C CEE CPT Sbjct: 80 HSIKMEVWDLSSQNTGAHAIKTARGVRENAQNKRHLYPD---VNFGTCTVCRNCEEICPT 136 Query: 112 TAIQLTPDFEMGE------YKRQDLVYEKEDLL 138 AI LT +FE Y Q+L +++D++ Sbjct: 137 NAIYLTHEFETARTRNSFTYSPQELTMQEKDVI 169 >UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT91_9BACT Length = 145 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 7/136 (5%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLP--PRYRGRIVLTRDPDGEERC 60 ++ L G T + + + G + T YPE L R+ G + + D +G+ +C Sbjct: 5 IQGLFHGIRTLLTGLKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNKC 64 Query: 61 VACNLCAVACPVGCISLQKAETKDG-----RWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 VAC LC ACP G I + D R + + C+FC LC ACP AI+ Sbjct: 65 VACGLCQAACPNGTIKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAIR 124 Query: 116 LTPDFEMGEYKRQDLV 131 FE Y R LV Sbjct: 125 FDTAFEHAVYTRDKLV 140 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP E + R+RGRI D +C+ C +C CP+ + +D R Sbjct: 39 TVQYPYEKLITSERFRGRIHFEFD-----KCIVCEVCVRVCPINLPVVDWNFQQDIRKKK 93 Query: 90 -EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 + + I+F CIFCG C E CPT + +T ++E+ Y R +L Y++ Sbjct: 94 LKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHELNYDQ 139 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL--QKAETKDG 85 R T MYP+E LP YRG I D C+ C+LCA+ CP + + K E++ Sbjct: 25 RLTIMYPDEIEDLPEDYRGMIEYDWD-----SCIKCSLCAMVCPADAMKMYVSKEESEKE 79 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 + IN++RC+FCG C + CPT +++ T ++ Y ++ +Y ++ Sbjct: 80 GKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTYEEQIYPPQEF 131 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 14/110 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC-----ISLQKAETKD 84 T YP E + RYRGRI D +C+AC +C CP+ + ++ + K+ Sbjct: 39 TVQYPYEKLIPSERYRGRIHYEFD-----KCIACEVCVRVCPINLPVVDWVMNKETKKKE 93 Query: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 R Y I+F CIFCG C E CPT + +T ++E+ + R L Y+ Sbjct: 94 LRNY----SIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSLNYDN 139 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 10/108 (9%) Query: 33 YPEEPVYLPPRYRG--RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP- 89 YPE+PV + RYRG R LT C+AC+ CA ACPV CI + K + + + Sbjct: 43 YPEKPVPVAARYRGFHRYDLTT-------CIACDQCAKACPVDCIYIGKERVEGSKGFKI 95 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 F I++S+C+FC LC E CP I + ++ Y R + + L Sbjct: 96 TGFAIDYSKCMFCALCVEPCPVDCIFMGATHDLSCYSRDGCIVDFSRL 143 >UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11 Tax=Chlorobiaceae RepID=A1BF37_CHLPD Length = 228 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 21/123 (17%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK---------- 79 T YP E + P R R+ D C+ C C ACP+GCI+++ Sbjct: 52 TLQYPREAIPTPANGRYRLENNIDD-----CIGCAQCERACPIGCITIETIKVTADDLGV 106 Query: 80 -AETKDGR----WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 +T G+ W P F I+ ++C+ CGLC CPT + +P + E+ RQ+LVY Sbjct: 107 CGKTSGGQQKKFWLP-VFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVYHF 165 Query: 135 EDL 137 +L Sbjct: 166 GNL 168 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 10/103 (9%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 R T YP+ LP R+RG + DP C C +C C I + + + W Sbjct: 19 RATVSYPKNKRTLPDRFRGAVEFDPDP-----CTGCGMCERHCAADAIVVGTDDDGNVTW 73 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + ++C+FCG CEE+CPT AI + DFE+ + R+ Sbjct: 74 -----EYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESF 111 >UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ Length = 166 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 19/120 (15%) Query: 20 IGLHAFAK--RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 +G+ F K R T YP E ++ R+RG ++ + E+C++C CA ACPV I + Sbjct: 22 VGVKEFVKPTRFTIQYPRERRWVIDRFRGFMI-----NDVEKCISCFQCAWACPVNAIFM 76 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT-------PDFEMGEYKRQDL 130 +A +G++YP I + +CI C C +ACP ++Q T PD E +K +D+ Sbjct: 77 YRAP--NGKYYPG---IRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPEDM 131 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 16/128 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++++ + + F K T YP + + YR RI T E C+ CN+C CP Sbjct: 5 LKALKEVINNLFTKHSTIEYPYKKIETAETYRARIKFT-----PENCIGCNICVRNCPAN 59 Query: 74 CISLQKAETKD-------GRWYPEFFR----INFSRCIFCGLCEEACPTTAIQLTPDFEM 122 I + + +D G+ P + I+ RCI+C C E+CP A+ + +FE+ Sbjct: 60 AIKITQINPQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFEL 119 Query: 123 GEYKRQDL 130 + ++DL Sbjct: 120 AAFDKKDL 127 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 15/119 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + +I + A T +YP + + +RG+I + DP +C+AC C CP Sbjct: 7 LKPLKLISVAKKAGVVTVLYPYQKPLITSEFRGKISI--DPS---KCIACGACVNVCPPN 61 Query: 74 CISLQKAETKDGRWYPEFFRINF--SRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 ++L K E IN+ RCIFCG C E CP AI +T +FE+ + DL Sbjct: 62 ALTLSKQE--------NIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDL 112 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP P+ +P +RG+ V+ DP E+C+ C C+ ACP + + + R Sbjct: 17 TEKYPFVPIEVPEGFRGKPVI--DP---EKCIGCTSCSNACPPQALQVYDEPERGVRVVH 71 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 F RCIFC C++ CPT AI+LT +FE+ +DL Sbjct: 72 LFI----GRCIFCARCQDVCPTGAIKLTKEFELATLSEEDL 108 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 H+ TR YP E + +P +RG+IV E+C+ C +C CP I++ + Sbjct: 15 HSIMAPATRNYPFEKLEMPDNFRGKIVF-----DYEKCIGCKICVRDCPARAITITR--V 67 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 D + EF+ RCI+C C ++CP A+ T +FE+ + R Sbjct: 68 ADKVFEAEFY---LDRCIYCAQCVDSCPKGALDNTREFELAQIDR 109 >UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Flexibacteraceae RepID=C6VZ34_DYAFD Length = 513 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 28/160 (17%) Query: 3 LKELLVGFGTQVRSIWM---------IGLHAFAKRE----TRMYPEEPVYLPPRYRGRIV 49 + L G +R +W I +F ++ T YP+E + +P GR Sbjct: 12 ISTTLTGMRLTLRHLWNARKSRKPADIRSSSFYDQQDGIVTIQYPQETIPIP--DNGRYR 69 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAET-------KDG---RWYPEFFRINFSRC 99 L + D C+ C+ CA CPV CI ++ + DG R Y F I+ ++C Sbjct: 70 LHNEMDD---CIVCDKCAKVCPVDCIDIEPIKAVEDVGRASDGSPIRLYAAKFDIDMAKC 126 Query: 100 IFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLI 139 +CGLC CPT + +T F+ E +D+VY +L Sbjct: 127 CYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYSNLTT 166 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD----- 84 T YP E + +P R R ++ + E C+ C+ CA CPV CI ++ D Sbjct: 48 TLQYPHEKLPVPSRGRYKL-----HNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGIT 102 Query: 85 -----GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 R + F I+ ++C FCGLC CPT + +TP+++ + Sbjct: 103 SNGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVF 148 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 14/121 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 F ++++++ + H K+ TR YP PV P RGR L DP+ +C+ C C Sbjct: 2 FKSKIKALLLSSRH---KKITRPYPFVPVTPPENLRGR--LEVDPN---KCIGCGNCVRT 53 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ KD R + RCI+CG C ACP AI +T ++E+ ++D Sbjct: 54 CPSRLITIE--NYKDER----IVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKD 107 Query: 130 L 130 L Sbjct: 108 L 108 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 14/117 (11%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG- 85 +R TR+ PE L R+RG L + +C+ C +CA CP I + KA G Sbjct: 57 ERVTRLCPEVESPLSERFRGLQTLDKS-----KCIGCGICANTCPNSAIKIVKAPIAPGS 111 Query: 86 ---RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG--EYKRQDLVYEKEDL 137 RW+P+ I+ C+FCGLC + CP A+ ++ G ++ +DL+ E L Sbjct: 112 EKKRWFPQ---IDIGHCLFCGLCIDQCPKGALSSGKEYCKGMVKWAHKDLLMTPEKL 165 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 K LL G + +W K+ET YPEE + + +RG L D C+ C Sbjct: 4 KGLLTGMSVTWKHLW-------GKKETVCYPEEKLPMTDNFRGG-NLAMD---WRVCIGC 52 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 ++CA ACP + L + + + + + RC++C LC EACP + D+ + Sbjct: 53 SMCANACPNKALDLTIVPDAKKKRHMKSYIHHSGRCLYCNLCVEACPVHTLVWDKDYAIA 112 Query: 124 EYKRQDLVYE 133 + ++ + ++ Sbjct: 113 TWSKETMTHD 122 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 12/102 (11%) Query: 33 YPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFF 92 +P+EPV +PP++RG+ + D E+ C C C CP G I++ E K G ++ + Sbjct: 23 FPKEPVKVPPKWRGKPLY----DAED-CTGCRQCERVCPPGAITI---EDKKGEFF--HY 72 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 +I++ CI+C C +ACPTTA LT D + G Y D E+ Sbjct: 73 KIDYGVCIYCWYCIDACPTTA--LTGDDKTGLYVGTDRTQER 112 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 23/144 (15%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL--QKAETKDGRW 87 TR+YPE + LP RG L C+ C CA CP CI + K Sbjct: 20 TRLYPEVMMELPANERGIHEL-----DATTCIGCGSCARVCPNSCIEMVPYKYGNPLKNR 74 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 +F +I++ RC FCGLC + CP + +++ E+ + R+D+VY GP Sbjct: 75 KMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDIVY--------GPD---- 122 Query: 148 YNFYRMAGMAIDGKDKGEAENEAK 171 R+A K+ E E EAK Sbjct: 123 ----RIAVKKFSDKEVAELEAEAK 142 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 9/124 (7%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V +I A K T MYP P +RG I+ D +C+ C+LCA CP Sbjct: 33 HVSAISAALRRASKKPMTLMYPTVEEEKPQLFRGFILYDYD-----KCIGCSLCAQICPA 87 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + + D R P + + RCI+CGLC + CPT A+ L+ F+ K +D+++ Sbjct: 88 RAIKMYRVPG-DKRLRPGY---DVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIF 143 Query: 133 EKED 136 + D Sbjct: 144 DPID 147 >UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WN89_ACTMD Length = 173 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 21/114 (18%) Query: 40 LPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI---SLQKAETKDGRWYP------E 90 LPPR RG I L E C C +CA CP CI S + E + G P + Sbjct: 4 LPPRTRGVIALL-----EANCTVCMICARECPDWCIHIDSHTEVEQQPGSARPRARNVLD 58 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEM-------GEYKRQDLVYEKEDL 137 F I++ +C++CG+C EACP A+ PDF G +LV+E++ L Sbjct: 59 RFAIDYGQCLYCGICVEACPFDALHWAPDFSYPGTGTPDGSGAVAELVHERDVL 112 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 22/134 (16%) Query: 23 HAFAKRETRMYPEEPV-YLPPRY-------------RGRIVLTRDPDGEERCVACNLCAV 68 H KR T YPEE + ++ Y +GR +L D C C LC++ Sbjct: 17 HIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHD-----HCTGCQLCSI 71 Query: 69 ACP--VGCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 AC I++ K + + +I++ +C+FCGLC +ACP A+ +T D+E+ + Sbjct: 72 ACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALYMTNDYELSSF 131 Query: 126 KRQDLVYEKEDLLI 139 ++ L+Y L + Sbjct: 132 TKEGLIYTPAQLAV 145 >UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ75_9SPHI Length = 488 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 15/121 (12%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL-------QKA 80 R T YP E + +P R R+ D C+ C+ CA CPV CI + Q Sbjct: 57 RVTTQYPYEAIPVPDNGRYRLFNEMD-----DCIVCDKCAKICPVDCIDIEPIRATGQIG 111 Query: 81 ETKDG---RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 DG R Y F I+ ++C +CGLC CPT + +T ++ E D++Y +L Sbjct: 112 TASDGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMIYHFSNL 171 Query: 138 L 138 Sbjct: 172 T 172 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +R I I L T YP +P P +RG+ + DP C+ C CA CP Sbjct: 3 IRQILKIALREGVA--TLEYPFKPEEAPEDFRGKPEI--DPS---ICMGCGACANVCPPD 55 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL--V 131 I+ + R + +I + RCIFCG CEEACP +AI+ + ++E+ R+DL V Sbjct: 56 AITCVDDLERGLRTW----KIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVV 111 Query: 132 YEKEDLLISGPGKY 145 E S GKY Sbjct: 112 VETPLARCSTCGKY 125 >UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6M7_THEAS Length = 301 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL- 116 ERCV C CA+ACP G IS Y E R++ SRC+ CG+C +ACP A++L Sbjct: 53 ERCVGCGRCALACPAGAIS-----------YGEHLRLDRSRCVRCGMCAQACPADAMRLL 101 Query: 117 ----TPDFEMGEYKRQDLVYEKEDLLISGPGKYP 146 TP + + + ++ Y++ ++ G P Sbjct: 102 GWAMTPRELLAQALKDEIFYDQSGGGVTLSGGEP 135 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 28/128 (21%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 K E ++ P PV PP +RG++ D CV C LCA CP I L +D + Sbjct: 37 KGEVKINP--PVATPPGFRGKLEYDID-----ECVGCGLCAQVCPSHAIEL----VRDKK 85 Query: 87 WY------------PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 W P +I SRC+FCG C + CP ++++ +F + + Sbjct: 86 WIIMHCKEGAKLAAPLKIKIYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDKL-----A 140 Query: 135 EDLLISGP 142 EDL+I GP Sbjct: 141 EDLIIPGP 148 >UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SQW6_BOTFB Length = 271 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%) Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ E +DG + I+ ++CI+CG C+E+CP AI +P+ E R++ Sbjct: 109 CPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIVESPNAEYATETREE 168 Query: 130 LVYEKEDLL 138 L+Y KE L Sbjct: 169 LLYNKEKLF 177 >UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6 Tax=Chloroflexi (class) RepID=A7NL08_ROSCS Length = 449 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Query: 30 TRMYPEEPVYLPPRYRG-RIVLTRDPDGEERCVACNLCAVACPVGCISLQKA-ETKDGRW 87 T YPEE + LP +R I+L D G+E C +C C CP I + +A + G+ Sbjct: 65 TVQYPEERLKLPEAFRNFPILLYDDETGQELCTSCFQCQRICPPQVIHMTQARDPSTGKP 124 Query: 88 YPEF--FRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 P F I + C+ CGLC E CP AI++ +FE Sbjct: 125 VPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFE 160 >UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR32_9DELT Length = 223 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 35/166 (21%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLT---RDPDGEE 58 T+++ + G + + + ++ F T YP + V YRG + L DP G Sbjct: 23 TIRKTIKGLWSLGVGLKVTSVNFFRPPVTVHYPRQVVPSLEGYRGHVELVPSAEDP-GAS 81 Query: 59 RCVACNLCAVACPVGCISLQKAETKD-------------------------------GRW 87 RC+ C C CP CIS++ + + R Sbjct: 82 RCIGCGACVRICPGACISIKVSHKRPHLAPKKTGKPPDHDQGHFLIPMPKARALPGIARR 141 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 P F++N++ C CGLC E CP A+ + + + Y R + Y+ Sbjct: 142 SPTSFKLNYNYCSLCGLCVETCPAGALAFSSNIYLAGYTRNEFKYD 187 >UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FHA1_SORC5 Length = 214 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEE---PV--YLPPRYRGRIVLTRDPDGE 57 +K + T + + + H F + T YP++ PV LPPRYRG + + D Sbjct: 7 IKSISSAANTILEGMAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDI--- 63 Query: 58 ERCVACNLCAVACPVGCISLQ-KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT---A 113 C C C ACP+ CI++ + + + F I+ +C++CGLC EAC T A Sbjct: 64 --CTGCKRCERACPIECIAIDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTGA 121 Query: 114 IQLTPDFE 121 I+ T +FE Sbjct: 122 IRHTREFE 129 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 21/143 (14%) Query: 16 SIWMIGL----HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 +++ +G+ + T YP E + +RG I+ DPD +C++C C+ CP Sbjct: 23 NVYAVGVAMQESVYPHTMTVFYPRERKKMSDNFRGFILF--DPD---KCISCFNCSFVCP 77 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I +++A K R+YP I++ RCIFC C ++C A++ T ++ YK D + Sbjct: 78 ANAIRMKEAPNK--RYYP---TIDYGRCIFCHFCIDSCSGGALKATKIHDVA-YKDMDEM 131 Query: 132 YEKEDLLISGP------GKYPEY 148 + + +I P KY EY Sbjct: 132 FTPTEEMIELPEIIREDKKYVEY 154 >UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ Length = 160 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 23/144 (15%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPP--RYRGRIVLTRDPDGEERCV 61 + G ++ I + H F+KR T YP E Y+PP YRGRI L E C+ Sbjct: 6 QNFFEGVKNIIQPIIVGFKHIFSKRHTMKYPYE--YIPPTKNYRGRIELDM-----ETCI 58 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT--------A 113 C LC CP I DG+ +P I+F +C FCG C CP Sbjct: 59 NCMLCEKYCPDHAIQTYYV---DGKKFP---GIDFGKCCFCGYCVWVCPPNIRKGGEEVC 112 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDL 137 + L + + + +L+Y + L Sbjct: 113 LSLNEEHSFPSFDKAELIYPPQKL 136 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 10/86 (11%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP E LP +RG I+ + E C++C CA CP ++Q ++GR+YP Sbjct: 37 TISYPHERRKLPDYFRGFILFEK-----EECISCFRCAHICPAN--AIQMYADQEGRYYP 89 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQ 115 +++++CIFC C ++CPT A++ Sbjct: 90 ---GVDYAKCIFCHFCVDSCPTAALK 112 Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 P E C+ C LC +CPV I + E K ++ +C CG+C CPT Sbjct: 183 PLNAENCIGCRLCMFSCPVDAIKSKVEEVKVT------LETDYEKCTGCGICVRICPTEV 236 Query: 114 IQLTP 118 ++LTP Sbjct: 237 LKLTP 241 >UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales RepID=NUOI2_AQUAE Length = 208 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 21/136 (15%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRG----RIVLTRDPD----------------GEERCVA 62 +A K T YP E + P R+RG ++V +P G+ RCV Sbjct: 31 NALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILVEYGKSRCVV 90 Query: 63 CNLCAVACPV-GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 C C ACPV ++ + +G+ F +N C +CG C +ACP + T E Sbjct: 91 CLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVDCLYQTDIHE 150 Query: 122 MGEYKRQDLVYEKEDL 137 Y R+D V E L Sbjct: 151 NASYTRKDAVLTLEIL 166 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 11/83 (13%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET---KDGRWYPEFFRINFSRC 99 RYRG + E C+ C LC+ CP I+ K E K +W P I++ RC Sbjct: 39 RYRGF-----HSNNIETCIGCQLCSKVCPAAAITYVKIENSGKKGLKWRP---VIDYGRC 90 Query: 100 IFCGLCEEACPTTAIQLTPDFEM 122 +CG C + CPT ++ LTP +E+ Sbjct: 91 CYCGFCTDICPTKSLILTPRYEL 113 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 11/129 (8%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP + PP YRG + DP C+ C C ACP ++++ + ++GR Sbjct: 27 TTSYPFVDIEKPPEYRG--IPRIDP---HLCIGCGACVRACPPDALTIE-WDFENGRKRI 80 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP--GKYPE 147 F N +RCI C C E CPT A+Q T FE+ ++DL+ + L P G+Y E Sbjct: 81 VF---NAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGRYEE 137 Query: 148 YNFYRMAGM 156 + ++ M Sbjct: 138 FTERQIGKM 146 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 15/105 (14%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK--DGRW 87 T YP P ++P + RG++ + + C AC C CP G I + K E W Sbjct: 18 TDPYPFGPTFIPDKLRGKLKV-----DAKACTACGTCEEVCPSGAIHITKNENVYVHTTW 72 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 Y + C FCG CE CPT AI+LT DF + + + Sbjct: 73 Y--------NTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKF 109 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 13/116 (11%) Query: 6 LLVGFGTQVRSIWMIGLHAFA--KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 L G + ++ MIGL F +R + YP+E L YRG I+L + +C++C Sbjct: 16 LFTGVTDNLAAL-MIGLKYFVNPRRFSIYYPKEYPELRQGYRGFIILNK-----AKCISC 69 Query: 64 NLCAVACPVGCISLQKA-----ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 CA CP + + + + + + +F IN+ RCIFCG C + CPT A+ Sbjct: 70 AACARICPSAAMKMIRVPVPHPKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEAL 125 >UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS07_DESVM Length = 207 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 36/160 (22%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLT---RDPDGEER 59 L L+VG G + G+ R + PE +RG I L +DP + + Sbjct: 11 LWSLVVGLGITGKEFCKPGVTVHYPR-AEVTPEAAA----SFRGPIELIGLDKDP-AKPK 64 Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRI------------------------- 94 C+AC LC ACP CI++ +A T + PE + Sbjct: 65 CIACMLCVSACPSNCITVTRAPTP--KPTPEELKAMAEAEARGEKPKKPAPPKAPGTWTY 122 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 +FS C CG C EACP +I + D M KR+D V+++ Sbjct: 123 DFSLCSLCGSCVEACPVDSIGFSHDIYMVGTKREDFVFDQ 162 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD 84 F+K T YP P P R RG I + E C++C +CA +CP G +++ +A Sbjct: 18 FSKPVTTSYPFAPAQYPERMRGHIEI-----DIESCISCGMCARSCPPGALTVDRAA--- 69 Query: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 G W + F C+ CG C CP +++ P + + R Y + L Sbjct: 70 GTWTIQRF-----DCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTTPL 118 >UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=Wallaceina RepID=Q9MES3_9TRYP Length = 102 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 42/86 (48%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T + P E + RG L G ERC+AC LC CP I ++ + G + Sbjct: 2 TIVLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCEYICPSLAIDVRVLRSLLGFRFS 61 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQ 115 E F +++ RCI+CG C CPT AI Sbjct: 62 EIFTLSYRRCIYCGFCMHVCPTDAIT 87 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 26/176 (14%) Query: 16 SIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 ++ ++ + F T +P+ EPV +P +RG++V D +C+ C LC CP G Sbjct: 6 TLSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVD-----KCIGCKLCMNVCPAGV 60 Query: 75 ISLQKAETKDGRWYPEFFRINF--SRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 + PE ++ RC+FC C + CP A++++ +F + Y + D Sbjct: 61 F----------EYVPEIKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYDDNL 110 Query: 133 ------EKEDLLISGPGKYPEYNFY--RMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 E E+++ GK +Y + G + ++ + E P V + P Sbjct: 111 RWLKNEEIEEMIAQKSGKTKKYRIIAEKCKGCTLCARNCPQNAIEGAPRVVHKINP 166 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + F + T +PEE R RG IV R +C++C LC CP I Sbjct: 14 YVFQRPITVRWPEERRDYGDRMRGFIVNDRG-----KCISCQLCEAVCPAKAIKFHL--E 66 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 DGR YP I++ RCI CG C +ACPT +++ + E+ Sbjct: 67 ADGRRYPG---IDWGRCILCGYCVDACPTGSLKYVNNTEI 103 >UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDP8_9PROT Length = 168 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 12/97 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T+ +EP + P +RGR ++ E C C+ C CPV I ++ K P Sbjct: 23 TKDIVKEPAHKSPIFRGRHIVKY-----EICTGCDACNKICPVDAIKMKPLPIKRPNKVP 77 Query: 90 EFFRINFSRCIFCGLCEEACPT---TAIQLT-PDFEM 122 E +N + CIFCGLCE+ CPT AI+L D EM Sbjct: 78 E---VNLAICIFCGLCEDVCPTKPEKAIKLAGGDIEM 111 >UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z1_THESM Length = 152 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 29/113 (25%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 K E +++P PV +P +RG+I DP ERC+ C LC CP + Sbjct: 40 KGEVQIHP--PVPIPEDFRGKI--HYDP---ERCIGCRLCITVCPANAME---------- 82 Query: 87 WYPEFFRINF--SRCIFCGLCEEACP----------TTAIQLTPDFEMGEYKR 127 W PE +I SRC+FC LC + CP A+ ++ DF + +Y + Sbjct: 83 WIPELRKIRHYVSRCMFCALCVDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135 >UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax=Trypanosomatidae RepID=NDUS8_TRYBB Length = 145 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 44/92 (47%) Query: 24 AFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK 83 F T P E + RG L G ERC+AC LC + CP + ++ + Sbjct: 17 CFVCCVTICLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCDLICPSLALDVRVGWSF 76 Query: 84 DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 G + ++F +++ RCI+CG C CPT AI Sbjct: 77 GGHRFADWFTLSYRRCIYCGFCMHVCPTDAIT 108 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T +P + P R+RG++ + DP +CV C +C C G I ++ E + G Sbjct: 17 STDPFPFAETHTPSRFRGKVTM--DP---AKCVGCAICRHVCAGGAIRIEPREDRSG--- 68 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 F + + C CGLC CPT AI +T D+ + + + + + Sbjct: 69 -YDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHLQERKYDWAEHHFV 117 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 14/110 (12%) Query: 22 LHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE 81 L A +K E + EPV R+RG++ R E+C+ C +C CP I + Sbjct: 35 LEAASKGEIDL--NEPVETWGRFRGKVGYDR-----EKCIGCGMCMKVCPANAIERAPED 87 Query: 82 TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 P+ ++ RC FC C + CP A+ +T DF + Y+R+ V Sbjct: 88 -------PKKIIVHNDRCCFCAQCNDICPVDALTMTCDFAISTYERKSNV 130 Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 EE CV C +CA ACPVG I + E I+ +C+ CG+C CP AI+ Sbjct: 172 EEDCVGCTICAKACPVGAIEGKVKEK---------HVIDPEKCVGCGVCASKCPKGAIE 221 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 38 VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFS 97 ++ P RYRG + E C+ C+ C CP I+++ K PE +N S Sbjct: 32 MHSPARYRGEHRIDY-----ETCIGCDSCNKICPTHAITMKHLPFKKQNIVPE---VNLS 83 Query: 98 RCIFCGLCEEACPT 111 CIFCGLCE+ CPT Sbjct: 84 VCIFCGLCEDVCPT 97 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++S+ + + R T +YP E LP +RG VL D E+C+ C C +ACP Sbjct: 23 LKSLKAVAEYLVQSRPTTLYPFEKNDLPENFRG--VLVYDI---EKCIGCGACVLACPNN 77 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C+ + + + + C+FCGLC +ACP A L Sbjct: 78 CLYRRPGPKTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSL 120 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%) Query: 25 FAKRETRMYPEE--PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 F K ET +YP E P YL +G I + + C+ C +C CP I ++K Sbjct: 15 FTKPETLLYPTEVKPAYL--NLKGHIA-----NRIDECILCGMCQRVCPSDAIVVEK--- 64 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 K+G W + FR C+ C C ACPT+++ + P+++ Sbjct: 65 KNGTWSIDHFR-----CVQCSACVRACPTSSLSMEPEYQ 98 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 11/105 (10%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 K T YP + L PRY GR L C C C ACP +L E G Sbjct: 12 KYRTLDYPHQQPTLSPRYMGRPSLI-----PVDCGDCRACYAACPTA--ALLPTEGVPGS 64 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 ++ RC FCG C ACP AI T + M ++R+DL+ Sbjct: 65 TP----TLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDLL 105 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 13/104 (12%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E + P+YRG L ++CV CN C CP I + Sbjct: 23 WMGIKYLFKKPVTIKIPFEKIEPAPKYRGFHTLDW-----KKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETKDG----RWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E DG R +P +I++ RC FC C + CPT A+ + Sbjct: 78 TWLEV-DGKMEKRPHP---KIDYGRCTFCQFCVDVCPTGALGFS 117 >UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon RepID=D1JH36_9ARCH Length = 678 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 18/115 (15%) Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINF--SRCIFCGLCEEACPTTAIQL 116 +C+ CN C CP KA TKD +INF RCI CGLCE+ACP AI L Sbjct: 540 KCLICNACETLCPT------KALTKDKN------KINFVYGRCIACGLCEQACPEEAITL 587 Query: 117 --TPDFEMGEYKRQDLVYEKEDLLISGPGKY--PEYNFYRMAGMAIDGKDKGEAE 167 T DF K + E E + +G GK + F R++ + +GE + Sbjct: 588 ERTLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISKALRESGGRGEVK 642 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD 84 F T YP ++P RG+ C+AC +C C G I +++ K Sbjct: 13 FKSPTTDPYPFGETFVPKGLRGKAKYNAGA-----CIACRMCEHVCAGGAIQIREVADKS 67 Query: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 G F + + C FCGLCE CPT AI+LT D+ + Y ++ + Sbjct: 68 GLE----FILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKGFI 117 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 13/105 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP E P RGRI + + C+ C LCA CP G I+++K E+ RW Sbjct: 20 TVRYPLEKKEPFPASRGRIEI-----NIQDCIFCGLCARRCPTGAINVEKPES---RW-- 69 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 IN RCI CG C E CP +++ + ++ + VY+ Sbjct: 70 ---SINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQN 111 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E V + YRG L ++CV CN C CP I + Sbjct: 23 WMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDW-----KKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETK---DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM-GEYKRQDLVYE 133 E + R +P +I++ RC FC C + CP A+ ++ + E+K ++L E Sbjct: 78 TWIEVDGKMEKRPHP---KIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEEL--E 132 Query: 134 KEDLLISGPGKYPEYN 149 D + P K+ E N Sbjct: 133 LFDWVPIHPDKFREIN 148 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 21/120 (17%) Query: 28 RETRMYPEEPV-YLPPRYRG--RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK- 83 RET +P P LP R+ G R+ ++ DG C CA CP I++ ++ Sbjct: 15 RETMAFPNGPAPALPDRHGGALRVDASKCADG------CAACAEVCPTQAITVADSKVAP 68 Query: 84 ----DGRWYPEF-------FRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 DG P ++ RC+FC C + CP AI T D M +R+DLV Sbjct: 69 PGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRREDLVL 128 >UniRef50_C0QFC7 Fdx4 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFC7_DESAH Length = 143 Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 + C+AC +C ACP G I L +KD YP N RCI CG CE+ CP AI + Sbjct: 78 KTCMACTICVEACPTGAICLDDPTSKDPHAYPALA--NEKRCIGCGFCEKECPVGAITMA 135 Query: 118 PDFEM 122 E+ Sbjct: 136 APVEI 140 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E+C +C +CA CP I + A +G+ YP I++ RCI C C + CPT A+ T Sbjct: 55 EKCTSCMMCARICPANAIKMYVAP--NGKRYPG---IDYGRCIMCHFCIDVCPTEALFPT 109 Query: 118 PDFEMGEYKRQDLVYEKE 135 E+ Y ++++Y E Sbjct: 110 DIKELTWYDSKEMLYTPE 127 >UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=5 Tax=Euryarchaeota RepID=A5ULB0_METS3 Length = 335 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 ++ R+T ++ E LP R +V+ E++CV C++C+ CP G ISL Sbjct: 112 YSVCPRDTILFKRE---LPSRED--LVIGEISVDEDKCVYCSICSEMCPAGAISLTNNPE 166 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 ++ S+CI+CG+C+ ACP AI+ Sbjct: 167 FSNDNLNNTIEVDTSKCIYCGVCKRACPQDAIK 199 Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Query: 40 LPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL--QKAETKDGRWYPEF---FRI 94 + P RG I + CV C LC+VACP +SL + K+ YP + I Sbjct: 41 IVPIARGLIEMDLVSVTSNTCVLCGLCSVACPFDALSLTINGNDIKETGNYPVWEVESEI 100 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 N CI+CG C CP I F+ R+DLV Sbjct: 101 NDDDCIYCGRCYSVCPRDTIL----FKRELPSREDLV 133 Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 56 GEERCVACNLCAVACPVGCISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 +RCV C +C CP + L G + + + C+ CGLC ACP A+ Sbjct: 17 NNDRCVGCGICTDVCPTSSLRLGPIVPIARGLIEMDLVSVTSNTCVLCGLCSVACPFDAL 76 Query: 115 QLTPDF----EMGEYKRQDLVYEKED 136 LT + E G Y ++ E D Sbjct: 77 SLTINGNDIKETGNYPVWEVESEIND 102 >UniRef50_B1C3X1 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3X1_9FIRM Length = 770 Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 ++C C C+V CP CIS++K + +G YP I++ +CI CG C+ CP Sbjct: 399 DQCTGCGACSVICPKQCISMKKND--EGFLYPV---IDYHKCIHCGNCQRKCP 446 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 28/40 (70%) Query: 92 FRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 + I++ RCIFCG CEE CP AI+LT +FE+ + DL+ Sbjct: 71 WSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLI 110 >UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Proteobacteria RepID=A6GP23_9BURK Length = 704 Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 18/110 (16%) Query: 25 FAKRETRMYPEEPVYLPPRYR-GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK 83 +A+ + ++ EP+ LP G +++ +D +C C C ACP + Sbjct: 543 YAQLKAKVSFAEPIALPAAAPFGAVLVNKD-----KCTLCMSCTSACPASALIDN----- 592 Query: 84 DGRWYPEFFRINF--SRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 PE ++ F C+ CGLC E CP A+QL P +G R+ V Sbjct: 593 -----PEMPQLRFIERNCVQCGLCVETCPENAMQLVPQLLLGPAAREKRV 637 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 12/97 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T+ ++ ++ P +RG + D C C CA CPV I ++ K + P Sbjct: 23 TKDVTKDTMHHSPIFRGMHEIKYD-----ICTGCEACAKICPVDAIVMEPLPIKRPKALP 77 Query: 90 EFFRINFSRCIFCGLCEEACPT---TAIQLT-PDFEM 122 E +N CIFCGLCE+ CPT AI+L+ FEM Sbjct: 78 E---VNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEM 111 >UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMN2_9FIRM Length = 803 Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 D +++C C+ CA+ACP CI++ K+G YP+ I+ CI C C++ CP Sbjct: 416 DSKDKCCGCSACAMACPKQCITM--VADKEGFLYPQ---IDQELCIHCNKCQQVCP 466 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 14/79 (17%) Query: 45 RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSR 98 RG +L RD +C+ C+LCA +CP G I++ K R P F N+ + Sbjct: 37 RGAPLLDRD-----KCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSF---NYYQ 88 Query: 99 CIFCGLCEEACPTTAIQLT 117 CI+CG+C E CP AI + Sbjct: 89 CIYCGVCAEVCPGRAISMV 107 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 C+ C CA CP I ++ +GR+YP I+F +CIFC C + CPT A++ T Sbjct: 56 CLGCARCARICPANAIIMKNV---NGRYYPT---IDFGKCIFCHFCIDVCPTGALRNTT- 108 Query: 120 FEMGEYKRQDLVYEKEDLLISGPGK 144 DL + + I GK Sbjct: 109 -------VHDLAFNNPYITIGAGGK 126 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 11/102 (10%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEER-CVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP P+ LP +RG+ P+ +E+ C+AC CA ACP I + T D Sbjct: 15 TTQYPAAPMDLPYGFRGK------PEHDEKQCIACAACASACPPNAIQM----TVDESAG 64 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + IN+ RCIFCG CEE CP AI+L +FE+ +DL Sbjct: 65 TIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDL 106 >UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFX4_METVO Length = 419 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 15/103 (14%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPP-RYRGRIVLTRDPDGEERCVACNLCAVACPV 72 VR W L FA +T E+ Y+PP RYR V PD C++CN C +CP Sbjct: 12 VRKKW---LKRFANAKT----EKEAYVPPERYRRIPVSIDQPDN---CISCNGCYQSCPS 61 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 I +Q +E + G+ P FF CI CG C E CPT ++ Sbjct: 62 EAIEMQYSE-EYGKNLPVFFP---GSCIACGNCVETCPTGVLE 100 >UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBN0_VIBHO Length = 570 Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 10/78 (12%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 C C C CP G +S ++ G + E C+ CGLCE +CP + I L P Sbjct: 438 CTLCMGCVAVCPTGALS--SIGSRPGITFRE------QDCVQCGLCESSCPESVITLEPR 489 Query: 120 FEMGEYKRQ--DLVYEKE 135 F +RQ +++YE+E Sbjct: 490 FNWNSEQRQQREILYEEE 507 >UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibrio RepID=C4XJV9_DESMR Length = 199 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 57/146 (39%), Gaps = 39/146 (26%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRE-TRMYPEEPVYLPPRYRGRIVLT--RDPDGEER 59 LK L VG G R AFAK T +YP++ V YRG I L D R Sbjct: 14 LKSLFVGLGITGR--------AFAKPAVTVIYPKQEVTNLDTYRGHIELVGREDNPAMPR 65 Query: 60 CVACNLCAVACPVGCISLQ----------KAET------------------KDGRWYPEF 91 C+AC C ACP C+S+ AE + G P Sbjct: 66 CIACGACTRACPSQCLSVGCPVGAGSGGGDAEALELAGELIPVGTAMAPAPQKGCKVPGV 125 Query: 92 FRINFSRCIFCGLCEEACPTTAIQLT 117 F ++S C CG C ACP +++ + Sbjct: 126 FIYDYSLCSLCGQCVRACPVDSLRFS 151 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 8/88 (9%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + +K ET YP P P YRG I+ EE C+ C+ C CP G I + + Sbjct: 11 NLVSKPETIKYPFAPSPEPKGYRGTILYN-----EELCIFCDKCENICPPGAIKFEVVDI 65 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACP 110 + G+ + + N CI+CG C +ACP Sbjct: 66 ESGK---KQYNYNPYLCIYCGACVDACP 90 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 +C C C ACP G + L KDG + +N CIFC CEEAC A++L+ Sbjct: 37 SKCERCGKCISACPTGALVLVD---KDGER-EKLPAVNADECIFCRFCEEACTNQALKLS 92 Query: 118 PDFEMGEYKRQDL 130 +FE+ + R L Sbjct: 93 NNFELAQKSRDLL 105 >UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=C6BS80_DESAD Length = 201 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 37/159 (23%) Query: 14 VRSIW--MIGLHAFAKR-----ETRMYPEEPVYLPPR--YRGRIVLTRDPD--GEERCVA 62 V S+W ++GL K T YP E V +RG + L P + +C+A Sbjct: 11 VTSLWSLIVGLKVTGKNFVDKNVTLHYPRETVTSGELEGFRGPLELIGKPKDPAKPKCIA 70 Query: 63 CNLCAVACPVGCISLQKAETKD-----------------------GRWYPEFFRINFSRC 99 C +C ACP CI++ KA+ P F +FS C Sbjct: 71 CMMCVTACPSKCITVVKAKAPKPTEAELQAMKEAEERGEKVNKPKAPKEPAKFLYDFSLC 130 Query: 100 IFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 CG C E CP A++ + + + R++L K DLL Sbjct: 131 SLCGSCVENCPAKALRYSSNVYLTVTDRKEL---KMDLL 166 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 13/106 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 TR YP E RG I + E+C+ C +C CP CI + + K+G W Sbjct: 18 TRRYPFEKREPFEGTRGHI-----ENDIEKCILCGICQRVCPSNCIQVDR---KEGTWKF 69 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 E F CI CG C +ACPT ++ + ++ +++ +V +KE Sbjct: 70 EPFA-----CIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQKKE 110 >UniRef50_Q8ABR9 F420H2:quinone oxidoreductase n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8ABR9_BACTN Length = 400 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 + + RC C C +CP+ CI L K K+G YP+ ++ +RCI CG CE+ACP Sbjct: 5 EDKSRCCGCEACVSSCPLQCIELVK--DKEGFMYPQ---VDTARCIDCGKCEKACP 55 >UniRef50_B9L7Q7 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate n=2 Tax=Nautiliaceae RepID=B9L7Q7_NAUPA Length = 134 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 16/90 (17%) Query: 22 LHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE 81 H++ + E+PVY E C+ C+ C VACP C +++ Sbjct: 34 FHSYNYKVADWRVEKPVY----------------NRELCIDCDFCWVACPDSCFEVEEVV 77 Query: 82 TKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 K G+ + IN++ C CG+C E CPT Sbjct: 78 NKRGKKQAKIVGINYNLCKGCGVCVEVCPT 107 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 17/120 (14%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD 84 F++ T MYP +P RG + + E+C+AC C CP I + + K+ Sbjct: 15 FSRPATLMYPAKPAKKAALTRGHVTIV-----PEKCIACRTCQRKCPTQAIIV---DVKE 66 Query: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGK 144 W +I+ RCI C C E CPT + + + R ++ + ++GP K Sbjct: 67 KTW-----QIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTARGGIM----KVTVAGPKK 117 >UniRef50_C3X731 Molybdopterin oxidoreductase n=2 Tax=Oxalobacter formigenes RepID=C3X731_OXAFO Length = 701 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 60 CVACNLCAVAC-PVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C+ C LC +AC VG +L+ ETK GR + F +CI CG C CPT AI Sbjct: 567 CIGCGLCELACIEVGAEALKMVETKGGRMVFKDFTTPAEKCIGCGACTSVCPTGAI 622 >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 +++Q + ++ R + ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 55 LTIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 20/106 (18%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP EP P ++ G + + +C C C ACP G I+ Sbjct: 16 TSKYPAEPFRAPEKFLGMPAIDK-----SKCDRCGKCLAACPSGAIN------------- 57 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + F I+ RCIFC C + C +AI++T ++E+ + D E Sbjct: 58 DNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDFDVESS 101 >UniRef50_B0AC66 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AC66_9CLOT Length = 258 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 28/127 (22%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEP--------VY--LPPRYRGRIVLTRDPDGEERCV 61 T V I L +F ET++YP VY + P + I + D + +C+ Sbjct: 139 TNVNDIIEASLKSFLDGETKLYPRNKFMVFMINLVYKMVYPMFIKSINKKINIDND-KCI 197 Query: 62 ACNLCAVACPVGCISLQK--AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 C LC +CP+GCI + K + TKD C+FC C CP A + Sbjct: 198 NCKLCEKSCPLGCIKIDKVASYTKD--------------CLFCQRCINICPKNAFTY-KN 242 Query: 120 FEMGEYK 126 E+ +YK Sbjct: 243 KELSQYK 249 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 9/64 (14%) Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPE-----FFRINFSRCIFCGLCEEACPTTA 113 +C C++C CP I + T DG YP+ F RI+ +C FCGLC E CP A Sbjct: 44 KCTGCSMCQQVCPANAIDM---VTADGD-YPQNPRKRFPRIDLHKCTFCGLCVEYCPFNA 99 Query: 114 IQLT 117 + +T Sbjct: 100 LSMT 103 >UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subunit F homolog n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27009_METTH Length = 332 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 7/87 (8%) Query: 40 LPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF------FR 93 L P RG I + R +E+CV C LCA C G I LQK + K R E+ Sbjct: 41 LLPIARGLIKMNRVSFNKEKCVLCGLCASVCIFGAIDLQK-DGKSIRGADEYPFWDFKLE 99 Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDF 120 I+ +C CG C +ACP A+ D Sbjct: 100 IDDEKCFLCGNCADACPRNALLTIRDL 126 Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 58 ERCVACNLCAVACPVGCISLQ-KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E+C+ C CA CP I + + + R++ +C++CG+C+ CP AI++ Sbjct: 142 EKCIYCGECAAMCPASAIEISWRDPDSSNMAIADGIRVDEDKCLYCGICKRICPVGAIRM 201 Query: 117 T 117 + Sbjct: 202 S 202 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 38/142 (26%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 LK L G+ T+ L+ F KRE P + V +G + L D +C Sbjct: 8 LKNLFTGYATR--------LYPFKKRE----PFQDV------KGELKLDVD-----KCTF 44 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C +C + CP CI + + E + +RI+ C++CG+C + CPT+ ++ Sbjct: 45 CTVCQIKCPSQCIQVDRKERQ--------WRIDPFACVYCGICVDVCPTSCLR-----HE 91 Query: 123 GEYKRQDLVYEKEDLLISGPGK 144 G Y+ VY K SGP K Sbjct: 92 GYYR--PAVYSKTTDSYSGPPK 111 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 20/118 (16%) Query: 16 SIW-MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTR-DPDGEERCVA-CNLCAVACPV 72 ++W +IGL T +P +P P G + + R DP RC A C +CA +CP Sbjct: 2 ALWTLIGL--LEGSATTSWPLKPG--PDGQDGVVGMPRLDPG---RCEAGCEVCAASCPT 54 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 G I L A +++ RC+ C C E CPT A+ + D+ G R DL Sbjct: 55 GAIGLAGARIA----------LDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDL 102 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 10/100 (10%) Query: 21 GLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKA 80 L A A+ + + P P + R+RGR+ R +C+ C +C CP I Sbjct: 34 ALQAAAEGKVALNPAVPRW--GRFRGRLNYDR-----AKCIGCGMCTKVCPARAIVFD-P 85 Query: 81 ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +T+ + P ++ RC FC C + CP +A+ +T DF Sbjct: 86 DTEGQK--PRKVMLHGDRCCFCAQCNDVCPVSALSMTTDF 123 >UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5M7_CHRVI Length = 139 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 13/100 (13%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 ++ A AK TR+YP E R RG I D C C +CA CP I + Sbjct: 13 LVTRSALAKPATRLYPAERRTPYARTRGHIEFRID-----TCNFCTICAHKCPTQAIQVS 67 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 K D W I+ SRCI C +C E C I L+P Sbjct: 68 KL---DKTWA-----IDHSRCILCSICVEDCREGCITLSP 99 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 10/105 (9%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG 85 A R T YP E +P R+RGR + +C+ C CA CP I + ++ Sbjct: 16 AGRVTMPYPFESKPVPERFRGRPIWD-----HVKCIGCAGCANNCPSREILINDI-CQEI 69 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 R R RC +CG C + CP AI ++ +FE G K DL Sbjct: 70 RILHYLGR----RCTYCGRCADVCPEDAITMSHEFENGTNKITDL 110 >UniRef50_Q6LJL0 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q6LJL0_PHOPR Length = 210 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRI---------VLTRDPDGEERCVACNL 65 +S+W+ + A RM E L + ++ L D ++ C+ C+L Sbjct: 17 KSLWLTAIAAVPYGIGRMLMPEKNQLASLNKSQLNHDKLRPPGALNDDIAFQKACIGCSL 76 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 CA CP CI + + P + CI CG C E CPT A+ +T Sbjct: 77 CAEVCPPACIQFYHLDGANNANTP-YIEPALRACILCGKCMEVCPTNALTVT 127 >UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD Length = 458 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLC 105 G + L+++ E C++C C ACP+ + + A+ + Y + + N CI CG C Sbjct: 371 GILFLSKEEIERESCISCGYCVEACPMNLMPFEFADYYEKGKYEKMIKANIQNCIECGAC 430 Query: 106 EEACPT 111 E CP+ Sbjct: 431 EFVCPS 436 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 13/97 (13%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + ++ K TR YP P YRG + + D DG C+ C CA CP CI + K Sbjct: 7 VIMNLLRKPATRQYPFTVRDPFPNYRGELYI--DIDG---CIFCGTCARKCPSQCIEVDK 61 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 + G W + C++CG+C + CPT + + Sbjct: 62 EQ---GLWT-----CDPHACVYCGICRDTCPTKCLHM 90 >UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBL9_9ACTN Length = 113 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP+E + P R RG IV + + C+ C +CA CP G +++ + K G W Sbjct: 20 TVCYPQEKLAAPERLRGHIV-----NDMDVCICCGMCARRCPAGALAVDR---KGGTW-- 69 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQL 116 I+ C+ CG C E+CP + + Sbjct: 70 ---SIDPYACVVCGECIESCPKHCLTM 93 >UniRef50_C5U814 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanocaldococcus infernus ME RepID=C5U814_9EURY Length = 151 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 10/61 (16%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 ++RCV CNLC CP CI DG E IN +C+FCG C + CPT AI+L Sbjct: 19 KDRCVLCNLCKEVCPANCIF-------DG---EESVEINKEKCMFCGRCVKVCPTKAIKL 68 Query: 117 T 117 Sbjct: 69 V 69 >UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (EC 1.6.5.3) n=3 Tax=Eutheria RepID=B4DYI3_HUMAN Length = 171 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 30/58 (51%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 R + M + F + T YP E L PR RG L R P GEERC+AC LC CP Sbjct: 66 RGLGMTLSYLFREPATINYPFEKGPLSPRLRGEHALRRYPSGEERCIACKLCEAICPA 123 >UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X547_DESRD Length = 807 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 53/141 (37%), Gaps = 18/141 (12%) Query: 44 YRGRIVLTRDPDGEERCVACNLCAVACPVGCIS-------LQKAETKDG-RWYPEFFRIN 95 +R R+ P CVAC C+ CP S +KA KD R P+ + I Sbjct: 236 FRARLSSAAQPVDPAACVACGACSAVCPEFGHSGFNEGLFARKAIDKDAPRAVPDAYTIL 295 Query: 96 FSRCIFCGLCEEACPTTAIQLT--PDFEMGEYKRQDLVYEKEDLLIS--------GPGKY 145 C CG CEE CP AI L P+ + +Y L E L +S P Sbjct: 296 DDVCTRCGACEEVCPAGAIDLKAEPEERVQDYGAVFLATGFETLDLSQEQAFHTDAPNVV 355 Query: 146 PEYNFYRMAGMAIDGKDKGEA 166 F RM I GEA Sbjct: 356 HGMQFERMLDQGITNPQTGEA 376 Score = 44.3 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 17/76 (22%) Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCI 100 PP++ + E C+ C +C CP G I L T++G F C Sbjct: 588 PPKHSSHL-------NRETCIQCRMCETVCPHGAIRL----TEEGMVADPAF------CQ 630 Query: 101 FCGLCEEACPTTAIQL 116 CGLC ACPT A QL Sbjct: 631 ACGLCAAACPTHAAQL 646 >UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=3 Tax=Deltaproteobacteria RepID=A1AL89_PELPD Length = 435 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E+C C LCA ACP+ I++ A+T+ + + I+ + C+ CG+C CP+ A +LT Sbjct: 290 EKCSGCGLCAQACPINAIAMVAADTRSPKRKQDAV-IDTAICLGCGVCALKCPSGACRLT 348 Query: 118 P 118 Sbjct: 349 S 349 >UniRef50_D0LLI2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLI2_HALO1 Length = 591 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query: 53 DPDGEERCVACNLCAVACPVGCI--SLQKAETKDGRWYPEF-FRINFSRCIFCGLCEEAC 109 +P+ ERC+ C+ C CP + S +G W P F + F + + C LC E C Sbjct: 405 EPEFLERCIKCDQCINVCPTNVLQPSTLAQGGLEGVWTPVMDFSVGFCQ-LNCTLCTEVC 463 Query: 110 PTTAIQLTP---DFEMGEYKRQ 128 PT AIQ TP +G+YK + Sbjct: 464 PTGAIQKTPLARKLGLGDYKEE 485 >UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Methanococcus RepID=A6UQA8_METVS Length = 394 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 19/118 (16%) Query: 16 SIWMIGLHAFAKRE-----TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 SIW L+ F +++ T E+ Y+ P +I +T D E+C++C+ CA +C Sbjct: 4 SIWY--LYEFVRKKWFKKFTNAKSEKESYIEPERFRKIPVT--VDFPEKCISCSACAESC 59 Query: 71 PVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 P I L K + R P+F + CI CG C E+CPT + EMG +++ Sbjct: 60 PSDAI-LMKHNEEYNRIMPDF---DDGSCINCGNCVESCPTEVL------EMGTLRKE 107 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 11/97 (11%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS---LQKAETKDGRWYP---E 90 PV P RG+++ R+ C C LC CP I KD P + Sbjct: 47 PVETPSAMRGKLLYDRN-----LCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQK 101 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 RI CIFCG C + CP AI +PDF + R Sbjct: 102 RVRIYVGNCIFCGQCIDICPKGAISQSPDFLLATEDR 138 >UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=B8FCE3_DESAA Length = 347 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 17/108 (15%) Query: 40 LPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRC 99 LP VL RD +C C C ACP+ + L +++ + Y F RC Sbjct: 11 LPQARYAEFVLDRD-----KCNGCGRCVKACPIQLLELYGKKSRPNQRYDHF------RC 59 Query: 100 IFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 I C C +CP AI + D+ R D + K L GP P Sbjct: 60 ITCQNCAASCPQNAITIKGDY------RVDKGFWKNAHLFRGPKTMPN 101 >UniRef50_Q8TYH6 Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing n=1 Tax=Methanopyrus kandleri RepID=Q8TYH6_METKA Length = 150 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 12/107 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPV 72 VR++ + L +R+ + EPV RG L ++ + E+RCV C +C CPV Sbjct: 33 VRAVRYLRLRVPVRRDHLLIDGEPVT----ERGVPKLPKNVEVDEDRCVYCGVCMRTCPV 88 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 I + K Y I+ C+ CGLC E CP A++ D Sbjct: 89 DAIQVTKP-------YQGHIEIDDEECVGCGLCVEICPCNALEFGRD 128 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK------ 79 +K T YP+EP + P YRGR +C C+LC++ CP I + Sbjct: 16 SKPATIQYPKEPTPVEPDYRGRHYADLG-----KCTGCSLCSIECPADAIKMTPIPSGYD 70 Query: 80 -AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 ++ + YP I++ +C++C C CP A T ++ + + + Sbjct: 71 VPKSNPRKIYP---LIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 15/88 (17%) Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR--INFSR 98 P YRG++ E CV C +C CP G I ++ PE R I + Sbjct: 28 PAAYRGKVTF-----DETACVGCKMCEHVCPGGAIRFEE--------RPEGLRFMIWHNT 74 Query: 99 CIFCGLCEEACPTTAIQLTPDFEMGEYK 126 C+ CGLC C T AI+L+ D+ + + Sbjct: 75 CVNCGLCSHYCLTKAIKLSNDWHLSHLQ 102 >UniRef50_B6G1K9 Putative uncharacterized protein n=2 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1K9_9CLOT Length = 266 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 P G C C +CA CPVG IS + + +++ S+CI C C +ACP+ A Sbjct: 189 PKGSSACNGCGVCATVCPVGAISKENPK-----------KVDKSKCISCMRCIKACPSNA 237 Query: 114 IQLTPDFE--MGEYKRQDLVYEKEDLLI 139 ++ P + G+ ++ KE+ L+ Sbjct: 238 RKVNPVMKAVAGKKLKKSCFDRKENTLL 265 >UniRef50_C0QEM8 HdrA4 n=5 Tax=Bacteria RepID=C0QEM8_DESAH Length = 1161 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Query: 53 DPDGEERCVACNLCAVACPVGCIS-LQKAETKDGRWY-------PEFFRINFSRCIFCGL 104 DP+ RC CNLCA CPV ++ Y P + I+ + C CG Sbjct: 114 DPN---RCTGCNLCAQVCPVSIDDPFNHGLSRTKAIYLPVPHAVPNIYTIDMNHCTLCGE 170 Query: 105 CEEACPTTAIQLTPD 119 CE+ CP AI L D Sbjct: 171 CEQTCPFDAITLPAD 185 >UniRef50_A6L2Y7 F420H2-dehydrogenase, beta subunit n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6L2Y7_BACV8 Length = 379 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 +E C C LCA CP ISL E G YP ++ +CI CGLC++ACP+ Sbjct: 7 KELCTGCGLCAARCPKHSISLVAEEL--GHLYPS---VDQKKCIDCGLCQKACPS 56 >UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZP8_9BACE Length = 387 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 10/70 (14%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R L+ P E CV C +CA +CPV I+++ RI+ +CI C C Sbjct: 317 RRALSATPRVREACVGCGICAASCPVKAITVKNRRA----------RIDTGKCIRCYCCH 366 Query: 107 EACPTTAIQL 116 E CP A++L Sbjct: 367 ELCPHKAVEL 376 >UniRef50_Q8TYJ0 Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing n=1 Tax=Methanopyrus kandleri RepID=Q8TYJ0_METKA Length = 357 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF-FRINFSRCIFCGL 104 G +V+ EE+C+ C C ACP I++++ + PEF ++ +C++CG+ Sbjct: 142 GDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGV 201 Query: 105 CEEACPTTAIQL 116 C CP AI++ Sbjct: 202 CMRTCPVDAIKV 213 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 EE CV C+LCA CP I++++ G I+ +CI+C CEEACP AI + Sbjct: 114 EEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADAITV 173 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%) Query: 59 RCVACNLCAVACPVGCISLQ--KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +C AC +C ACPVG IS+ A + G + ++ S+C+ CG+C CP IQL Sbjct: 35 KCAACGICEAACPVGAISVAPPSAVVRKGE---DPIDVDESKCVLCGICAFVCPYDVIQL 91 Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 57 EERCVACNLCAVACPVGCISL---QKAETKDGR-WYPEFFRINFSRCIFCGLCEEACPTT 112 E +CV C +CA CP I L K T+ G P+ ++ C++C LC + CP Sbjct: 71 ESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQE 130 Query: 113 AIQL-----TP-DFEMGEYK 126 AI + TP D MGE + Sbjct: 131 AITVEREVPTPGDLVMGEIE 150 Score = 38.9 bits (89), Expect = 0.078, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +E CV C LC CP G + +K G+ + C +CG C ACP AI + Sbjct: 272 DEECVGCGLCVEVCPCGALEFEKG----GKAGKTKIVAHPETCAYCGACARACPVNAITV 327 Query: 117 T 117 Sbjct: 328 V 328 >UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 Tax=Methanosarcinaceae RepID=Q46CZ1_METBF Length = 346 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRW-YPEFFRINFSRCIFCGLCEEACPTTAIQ 115 E CV C LC CP GCI + + + DG+ I+ C+ CG C CP AI Sbjct: 106 NESCVHCGLCEDICPQGCIEVTRDISADGKLKLVGKTNIDTECCVHCGWCAAVCPVNAIS 165 Query: 116 LTPDFEMGEYKRQDLVYE 133 + FE G + R + V + Sbjct: 166 VEKPFE-GHWARDEDVCQ 182 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 10/70 (14%) Query: 58 ERCVACNLCAVACPVGCISL-QKAETKDGRWYPEFFR------INFSRCIFCGLCEEACP 110 E C+ C +CA ACP G + + Q+ +T + Y FR +N S C+ CGLCE+ CP Sbjct: 64 EACLVCGICAKACPTGALEMKQEGKTITDKSY--LFRAMKPTSVNES-CVHCGLCEDICP 120 Query: 111 TTAIQLTPDF 120 I++T D Sbjct: 121 QGCIEVTRDI 130 >UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RH85_MOOTA Length = 228 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC 102 R+R I +PD RC+AC C CP G I+ +A K R P + C+FC Sbjct: 153 RWRFHI----NPD---RCLACGRCRRVCPAGAIATNEAPGKSYRILPRY-------CLFC 198 Query: 103 GLCEEACPTTAIQLT 117 C E CP ++I+LT Sbjct: 199 FACLEVCPRSSIELT 213 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 17/104 (16%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T +P + + LP YRGR VL +D E+ A CP G ++L Sbjct: 15 TVEFPSDKIQLPEAYRGRPVLNQDAADED----VQKVASICPTGAVNLNDRT-------- 62 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 ++ +C+FCG C + I T D+ M KR+DL+ + Sbjct: 63 ----LDLGKCLFCGKC-QFIKQNFIIFTRDYRMFALKREDLIIK 101 >UniRef50_C6A249 Pyruvate-formate lyase-activating enzyme n=5 Tax=cellular organisms RepID=C6A249_THESM Length = 301 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E +C+ C+ C CP IS + ET+ +I+ +C CG+C ACPT+A++L Sbjct: 52 EFKCIHCHTCVKVCPENAISFDENETQ---------QIDREKCTGCGVCASACPTSALRL 102 Query: 117 T 117 Sbjct: 103 V 103 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 13/104 (12%) Query: 30 TRMYPEEPVYLPPRYRG--RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 T YP + PP YRG +I T C+ C C ACP +L + + + R Sbjct: 4 TLKYPFVKLEAPPEYRGIPQIDATL-------CIGCGACVNACPPD--ALLRIDDYN-RG 53 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 E ++ RCI C CEE CPT AI+LT FE R D V Sbjct: 54 VREIV-LDVGRCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHV 96 >UniRef50_B9K7A1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thermotoga RepID=B9K7A1_THENN Length = 366 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 19/91 (20%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 EE+CVAC CA CPVG I++ K RI++ +CI CG C C A+ Sbjct: 201 EEKCVACGTCAKFCPVGAITVTKVA-----------RIDYDKCIGCGQCIAMCSYGAMSP 249 Query: 117 TPDF-------EMGEYKRQDLVYEKEDLLIS 140 D +M EY + ++ +K+ + IS Sbjct: 250 KWDSSTDSLSKKMAEYAKA-VLKDKKAVFIS 279 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 9/97 (9%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKA---ETKDGRWYPEFFRINFSRC 99 RYRG V + +C+ C CA CP I++ + +DG+ P+ I++ RC Sbjct: 41 RYRGFHV-----NDWGKCIGCGTCAKICPTDAITMVEVPDLTQEDGK-LPQRPVIDYGRC 94 Query: 100 IFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 FC LC + C T ++++T ++ +D ++ D Sbjct: 95 SFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPTD 131 >UniRef50_A6UV92 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=cellular organisms RepID=A6UV92_META3 Length = 314 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Query: 24 AFAKRETRMYPEEPVYLPP--RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ-KA 80 AFA + R + + +PP GR L + +++CV C LC CP+ L K Sbjct: 210 AFAFNDNRAFCKYLCPIPPIQNILGRFSLIKMSIDKDKCVDCGLCEKNCPMDIKLLDYKN 269 Query: 81 ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 E K RI + CI C C CP AI F+ G+ Sbjct: 270 ENK---------RILSTECILCSTCSSVCPKHAISTKIKFDFGK 304 >UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZEG2_9GAMM Length = 839 Score = 46.6 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 53 DPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT 112 + + E+ C+ C+ CA ACPV + Q + + + N S CI CG+C CP+T Sbjct: 378 EAEQEQACIRCSYCADACPVELMPQQLLWYAKNQDHKKLEAYNLSSCIECGICAFVCPST 437 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 16/125 (12%) Query: 8 VGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCA 67 +G+ T V+ I + F T YP +P P RG IV + E+C+ C C Sbjct: 1 MGYMTFVKRIVA---NLFKPPVTSSYPLQPRTPLPIDRGHIV-----NQWEKCILCGACE 52 Query: 68 VACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 ACP G I + + K+ +W IN C+ CG C E CP + + + ++ Sbjct: 53 RACPSGAIRIDR---KNRKWI-----INPYACVQCGACVEQCPMKCLAMEGMYTEPSTEK 104 Query: 128 QDLVY 132 ++V+ Sbjct: 105 SEIVH 109 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 35 EEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRI 94 + P+ P GRI + D C C C C V +S++K +TK + I Sbjct: 16 KNPLTDNPYSYGRIEVCND-----NCTGCGKCVQECLVDAVSIKK-DTKH-----KSIDI 64 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 +F +CI+C C +ACP+ ++ + D++M Sbjct: 65 DFKKCIYCNNCVDACPSKVLKSSNDYKMAS 94 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 K TR+YP E ++GRIV DP E C+ C LC CP I++ KA D Sbjct: 14 KPATRLYPFEIREPFKEFKGRIVF--DP---ENCILCGLCQKKCPPDAITVTKA---DKT 65 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 W +N RCI C C CP + ++ Sbjct: 66 W-----ELNLFRCIMCTECVNGCPKGCLSIS 91 >UniRef50_B1L5Y3 Heterodisulfide reductase, subunit A n=2 Tax=cellular organisms RepID=B1L5Y3_KORCO Length = 656 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 E +C C +C CP IS+QK E DG Y +I+ C CG C ACP+ AIQ Sbjct: 584 ESKCSGCGICVSICPFNAISMQKRE--DGTRYS---KIDPLLCEGCGTCVAACPSAAIQ 637 Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 9/80 (11%) Query: 47 RIVLTRDPD-GEERCVACNLCAVACPVGCISLQKAETKDGRW--------YPEFFRINFS 97 +I + R P ERC C C CPV + K + YPE + I+ + Sbjct: 240 KITVMRKPRYVNERCNLCGKCEEVCPVSVPDEYEYGIKKRKAIYLPYSGAYPERYVIDPN 299 Query: 98 RCIFCGLCEEACPTTAIQLT 117 C FCG C E CP AI L Sbjct: 300 SCTFCGKCVEVCPVNAIDLN 319 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 13/87 (14%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP +P + P RG +V+ D C+ C LC + CP I + K D W Sbjct: 20 TIRYPYQPAKMTPVTRGHLVINID-----DCIFCGLCKMHCPADAIEVSKP---DRTW-- 69 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQL 116 R+N +C+ CG C CP + + Sbjct: 70 ---RLNQFQCVICGCCVSYCPKDCLSI 93 >UniRef50_UPI0001C42000 energy-converting hydrogenase A subunit Q EhaQ n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C42000 Length = 483 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 19/100 (19%) Query: 39 YLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINF-S 97 + PP +V EE C++C LC CP ISL DG P +I+ + Sbjct: 334 FFPPSLGIEVV-------EENCISCGLCMDVCPTKSISL------DG---PNPIKIDTDN 377 Query: 98 RCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 C++CGLC EAC AI+L +F + ++ + K DL Sbjct: 378 SCVYCGLCAEACNFEAIKLAEEFFTN--RNHEIFFIKRDL 415 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 16/104 (15%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLCAVACPVGCISLQKAETK 83 F K ET MYP E RG + D E ++CV C++C CP I + K K Sbjct: 15 FKKPETIMYPLESPEPYAAMRGHV------DVEPQKCVLCSICQRVCPTDSIVVDK---K 65 Query: 84 DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL-TPDFEMGEYK 126 W IN+ C+ CG C ACP A+ + T E + K Sbjct: 66 GASW-----TINWFSCVICGECVRACPHDALDMHTARLEAAQQK 104 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Query: 27 KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR 86 K TR+YP + +RGR+V + E C+ C C + CP CI++ + K G Sbjct: 14 KYATRLYPFQTRPAFEGFRGRLV-----NKIEDCIFCKSCQIKCPSQCITV---DPKAGT 65 Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 W + F C++C +C +ACPT + + Sbjct: 66 WDCDPFA-----CVYCSVCVDACPTQCLSMV 91 >UniRef50_B9CZJ4 Iron-sulfur protein n=2 Tax=Campylobacter RepID=B9CZJ4_WOLRE Length = 226 Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 C+LC CPVG ++ A++ DGR PEF + C+ CG+C E CP I + P+ Sbjct: 166 CDLCVSLCPVGDAAITMAKS-DGRNLPEFKQ----GCVGCGVCAEVCPAQIIDIAPN 217 >UniRef50_Q466M4 Nitroreductase n=6 Tax=cellular organisms RepID=Q466M4_METBF Length = 273 Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 ++RC C LC C G I L D P+ N S C++CG CE CP+ A+ L Sbjct: 9 QDRCTGCGLCVKMCSSGIIILD-----DKSNLPQVQEENISHCLYCGHCEVFCPSQALTL 63 Query: 117 T 117 Sbjct: 64 N 64 >UniRef50_D0T9V7 F420H2:quinone oxidoreductase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9V7_9BACE Length = 415 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 C CN C CP CI ++ E +G YPE ++ S CI CGLCE+ CP Sbjct: 10 CCGCNSCVQRCPKSCIRMR--EDDEGFLYPE---VDESVCIDCGLCEKVCPV 56 >UniRef50_Q58566 Polyferredoxin protein fwdF n=13 Tax=Methanococcales RepID=FWDF_METJA Length = 355 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 35/64 (54%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +++CV C C + CP G I +++ + ++ IN +C+ CG+C E CP AI L Sbjct: 114 QDKCVLCEQCEMVCPQGAIVVERELAEREKFVIGEININKEKCVLCGICAEYCPADAINL 173 Query: 117 TPDF 120 ++ Sbjct: 174 KYNY 177 Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 16/109 (14%) Query: 32 MYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF 91 + P E + + ++G +++ + C AC C CP C +L+ + KD Sbjct: 253 ICPAEAIEVEKPFKGELIIDVN-----ACNACGACISICP--CSALEFPKPKDKAEKVPR 305 Query: 92 FRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS 140 +N + C+ CG C +ACP AI++ KR ++ +E+E I+ Sbjct: 306 IIVNQNLCVLCGACAKACPVNAIKV---------KRTEINFEREPKAIA 345 Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 56 GEERCVACNLCAVACPVGCISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 +E CV C +CA CPV I++ G I+ C+ CG+C ACP A+ Sbjct: 29 NDELCVGCGICADICPVNAIAMGPLGAIAKGDIIAPKLDIDKDVCVLCGMCASACPFDAL 88 Query: 115 QLTPDFEMGEYKRQDLVYEK 134 L + G+ ++D Y K Sbjct: 89 DLKIN---GKSIKEDERYPK 105 Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 45 RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP-EFFRINFSRCIFCG 103 R + V+ +E+CV C +CA CP I+L+ P ++ +C+FC Sbjct: 141 REKFVIGEININKEKCVLCGICAEYCPADAINLKYNYPTPSNPKPITDIEVDKDKCVFCK 200 Query: 104 LCEEACPTTAIQL 116 +CE CP AI++ Sbjct: 201 VCEFVCPHDAIEV 213 >UniRef50_C8X5F1 Nitroreductase n=5 Tax=Deltaproteobacteria RepID=C8X5F1_DESRD Length = 273 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E+RC+ C CA CP CISL PE I+ RCI C C CPT A+ + Sbjct: 8 EDRCIQCGECAADCPAMCISLDNG-------LPE---IHEKRCIRCQHCLAVCPTAALSI 57 Query: 117 ---TPDFEMGEYKRQDLVYEKEDLLISG 141 PD +K EK + L+ G Sbjct: 58 LDKDPDDSRPLHKDSLPAPEKMETLLMG 85 >UniRef50_C3R5B3 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Bacteroides dorei RepID=C3R5B3_9BACE Length = 606 Score = 45.4 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 +E+C CN C C I+ ++G WYP R++ + C CG+CE CP Sbjct: 7 KEKCCGCNACGDICNQHAITFHL--DREGFWYP---RVDPNLCTNCGMCERTCP 55 >UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK Length = 147 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + ++ + F+ TR YP+E P RG IV T E C+ C C CPVG Sbjct: 1 MKMLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFT-----VEECMTCRRCERTCPVG 55 Query: 74 CIS------LQKAETKDG--RWYPEFFRINFS--RCIFCGLCEEACPTTAI 114 I L+ A +G R + + +CI+CGLC E CP I Sbjct: 56 AIKVEIGPRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGII 106 >UniRef50_B5YJP4 Conserved domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJP4_THEYD Length = 75 Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 45 RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGL 104 +G IV+ ERC CN C + CP GCI + G ++P F N + CI C + Sbjct: 7 KGLIVID-----SERCKGCNYCGLTCPKGCIEISSDFNSSG-YFPAKFS-NPANCIGCAM 59 Query: 105 CEEACPTTAIQL 116 C CP AI++ Sbjct: 60 CAVVCPEIAIEV 71 >UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA Length = 192 Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 57 EERCVACNLCAVACPVGCISL----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT 112 +ERC+ C LC CP G I + ++ E + P ++ C+ CG CE ACP+ Sbjct: 78 KERCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESACPSD 137 Query: 113 AIQLTPDFEMGEYK 126 AI + E+ E + Sbjct: 138 AITVEETAEVDEER 151 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 20/94 (21%) Query: 41 PPRYRGRIVLTRDPDGE-ERCVACNLCAVACPVGCISLQKAETKDG-----RWYPEFFRI 94 PPR+R PD + +RC+ C CA ACPV E +DG E + Sbjct: 31 PPRFRDF------PDVDLDRCILCGACADACPV--------EGRDGCPPAMEMSEEGPVL 76 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 + RCI CGLC E CPT AI++ E E + Q Sbjct: 77 HKERCIRCGLCVEVCPTGAIEMGTLHEEVEERVQ 110 >UniRef50_Q8TVA8 Archaea-specific flavoprotein n=1 Tax=Methanopyrus kandleri RepID=Q8TVA8_METKA Length = 246 Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 ERC C +C ACP I + DG+ + I RC+ CG C EACP AI Sbjct: 148 ERCEGCGICVDACPRSAIDMV-----DGKAF-----IRLLRCVGCGKCAEACPEDAIHGG 197 Query: 118 PDFEM 122 ++EM Sbjct: 198 LEYEM 202 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 10/120 (8%) Query: 19 MIGL---HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 M+G+ + F TR YP E RG+++ E C C C ACP G I Sbjct: 1 MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFH-----PEYCEFCGECERACPTGAI 55 Query: 76 SLQKAETKDGRWYPEFF--RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 L A + Y + R + +CIFCG C EACP AI+L + Y+++ V E Sbjct: 56 ELDTAWDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKEISVDE 115 >UniRef50_Q469E3 Formylmethanofuran dehydrogenase, subunit F n=4 Tax=Methanosarcinaceae RepID=Q469E3_METBF Length = 486 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%) Query: 58 ERCVACNLCAVACPVGCISLQK-AETKDGRWYPE---FFRINFSRCIFCGLCEEACPTTA 113 E+C C +C+ CPV I+ + E D + YP+ F IN +C+ C LCE ACP A Sbjct: 128 EKCTFCRMCSNLCPVHAITFEAVGEVPDEKRYPKYDAFVNIN-EKCLPCALCEGACPQDA 186 Query: 114 IQL 116 I++ Sbjct: 187 IEV 189 >UniRef50_A8D4D8 Reductive dehalogenase (Fragment) n=6 Tax=Bacteria RepID=A8D4D8_9CHLR Length = 505 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRW--YPEF--FRINFSRCIFCGLCEEACP 110 C C +C + CP I + + + RW P + +R+N+ RC+ C CE CP Sbjct: 397 CETCGICTIVCPSNAIQVGPPQWSNNRWDNTPGYLGYRLNWGRCVLCTNCETYCP 451 >UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Methanobacteriaceae RepID=A5UJY8_METS3 Length = 347 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 20/108 (18%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP----VGCISLQKAETKDGRWYPEF 91 E V P R+R + + E C+ C C +CP + + + ETK+G YP Sbjct: 28 EIVEKPSRFRNFPNVIK-----EYCIGCGACISSCPSPNAIKLVRDEDDETKEGVTYP-- 80 Query: 92 FRINFSRCIFCGLCEEACPTTAIQ--------LTPDFEMGEYKRQDLV 131 IN S CI CG C E CPT L P+F + KRQ ++ Sbjct: 81 -IINKSACIRCGFCAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFII 127 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 254 8e-67 UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 249 3e-65 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 229 3e-59 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 195 6e-49 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 179 5e-44 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 172 6e-42 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 171 1e-41 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 170 2e-41 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 166 3e-40 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 166 4e-40 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 163 2e-39 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 163 3e-39 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 162 5e-39 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 162 5e-39 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 162 6e-39 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 162 7e-39 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 161 1e-38 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 161 1e-38 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 159 6e-38 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 158 7e-38 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 158 9e-38 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 157 2e-37 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 155 5e-37 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 155 7e-37 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 154 1e-36 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 154 1e-36 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 153 3e-36 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 153 3e-36 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 151 7e-36 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 151 1e-35 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 151 1e-35 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 150 2e-35 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 150 2e-35 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 148 6e-35 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 147 1e-34 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 146 3e-34 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 146 3e-34 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 146 3e-34 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 146 5e-34 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 144 1e-33 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 143 2e-33 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 142 6e-33 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 142 7e-33 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 140 2e-32 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 140 2e-32 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 140 3e-32 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 140 3e-32 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 139 3e-32 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 139 4e-32 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 139 4e-32 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 139 6e-32 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 139 6e-32 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 139 6e-32 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 138 7e-32 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 138 8e-32 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 138 8e-32 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 138 9e-32 UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 137 1e-31 UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c... 137 2e-31 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 135 4e-31 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 134 9e-31 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 134 2e-30 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 134 2e-30 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 133 2e-30 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 132 5e-30 UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 130 2e-29 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 130 2e-29 UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 129 5e-29 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 129 6e-29 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 128 8e-29 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 128 8e-29 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 128 1e-28 UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 127 2e-28 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 127 2e-28 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 127 2e-28 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 127 2e-28 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 124 1e-27 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 124 1e-27 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 124 2e-27 UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE... 123 2e-27 UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro... 123 2e-27 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 123 3e-27 UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatu... 122 4e-27 UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip... 122 4e-27 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 122 4e-27 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 122 4e-27 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 122 5e-27 UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 122 6e-27 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 121 8e-27 UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain pro... 120 2e-26 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 120 2e-26 UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C... 119 3e-26 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 119 4e-26 UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp... 119 4e-26 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 119 5e-26 UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria... 119 5e-26 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 118 8e-26 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 118 8e-26 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 117 1e-25 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 117 2e-25 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 115 8e-25 UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca... 114 1e-24 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 114 1e-24 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 114 1e-24 UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdeh... 114 1e-24 UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic... 114 1e-24 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 114 2e-24 UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro... 114 2e-24 UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax... 114 2e-24 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 112 4e-24 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 112 4e-24 UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u... 112 5e-24 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 112 5e-24 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 112 6e-24 UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro... 112 6e-24 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 112 7e-24 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 112 7e-24 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 112 7e-24 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 111 9e-24 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 110 2e-23 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 109 3e-23 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 109 4e-23 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 109 4e-23 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 109 5e-23 UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryot... 109 5e-23 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 109 6e-23 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 109 6e-23 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 109 6e-23 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 109 7e-23 UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 108 8e-23 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 107 2e-22 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 106 3e-22 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 106 4e-22 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 105 6e-22 UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 105 6e-22 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 104 2e-21 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 103 3e-21 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 3e-21 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 3e-21 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 103 4e-21 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 4e-21 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 102 5e-21 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 102 6e-21 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 9e-21 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 101 1e-20 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 100 2e-20 UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 2e-20 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 3e-20 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 100 4e-20 UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibri... 100 4e-20 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 100 4e-20 UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 4e-20 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 99 4e-20 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 99 5e-20 UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro... 99 7e-20 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 98 1e-19 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 96 4e-19 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 96 7e-19 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 95 9e-19 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 94 2e-18 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 94 2e-18 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 94 2e-18 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 94 3e-18 UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 93 4e-18 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 93 4e-18 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 92 9e-18 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 91 1e-17 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 90 3e-17 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 90 3e-17 UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=... 90 4e-17 UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax... 89 8e-17 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 88 1e-16 UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain pro... 88 1e-16 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 88 2e-16 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 88 2e-16 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 87 2e-16 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 87 2e-16 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 87 3e-16 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 87 3e-16 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 86 4e-16 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 2e-15 UniRef50_A6GD17 Carbamoyltransferase n=1 Tax=Plesiocystis pacifi... 84 2e-15 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 84 3e-15 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 3e-15 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 83 3e-15 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 83 4e-15 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 83 4e-15 UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran... 83 4e-15 UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 83 5e-15 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 83 5e-15 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 82 7e-15 UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins... 82 8e-15 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 82 8e-15 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 82 9e-15 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 82 1e-14 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 81 1e-14 UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte... 81 2e-14 UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=... 81 2e-14 UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone... 80 3e-14 UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subun... 80 4e-14 UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family ... 79 6e-14 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 79 6e-14 UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ... 78 1e-13 UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subun... 78 2e-13 UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 77 2e-13 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 77 3e-13 UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 ... 76 7e-13 UniRef50_Q8TYH6 Probable formylmethanofuran dehydrogenase subuni... 76 7e-13 UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 75 9e-13 UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su... 75 1e-12 UniRef50_B1L5Y3 Heterodisulfide reductase, subunit A n=2 Tax=cel... 75 1e-12 UniRef50_Q6LJL0 Putative uncharacterized protein n=2 Tax=Photoba... 74 2e-12 UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria... 74 2e-12 UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI 74 2e-12 UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Meth... 74 2e-12 UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C su... 74 3e-12 UniRef50_Q8TYJ0 Probable formylmethanofuran dehydrogenase subuni... 74 3e-12 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 73 4e-12 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 73 4e-12 UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminoc... 73 4e-12 UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 73 5e-12 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 72 6e-12 UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bactero... 72 6e-12 UniRef50_UPI0001BC56BC hydrogenase, Fe-only n=3 Tax=Fusobacteriu... 72 6e-12 UniRef50_Q3A9J0 Iron-sulfur cluster-binding protein n=1 Tax=Carb... 72 8e-12 UniRef50_Q8TVA8 Archaea-specific flavoprotein n=1 Tax=Methanopyr... 72 8e-12 Sequences not found previously or not previously below threshold: UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi... 99 9e-20 UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep... 91 2e-17 UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc... 86 5e-16 UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 81 2e-14 UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins... 80 4e-14 UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 80 4e-14 UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot... 79 5e-14 UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro... 79 7e-14 UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 78 2e-13 UniRef50_C1TQG7 Uncharacterized conserved protein n=1 Tax=Dethio... 78 2e-13 UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota... 77 2e-13 UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 77 2e-13 UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 77 2e-13 UniRef50_D2BHV2 Hydrogenase, EchF subunit n=5 Tax=Dehalococcoide... 77 3e-13 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 77 4e-13 UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus... 76 4e-13 UniRef50_B8FNM3 Putative uncharacterized protein n=1 Tax=Desulfa... 76 7e-13 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 74 1e-12 UniRef50_Q1PYR5 Similar to NAD(P) oxidoreductase, FAD-containing... 74 1e-12 UniRef50_B8FJB4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 74 2e-12 UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon... 74 2e-12 UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1... 74 3e-12 UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding sub... 73 4e-12 UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n... 72 7e-12 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 254 bits (649), Expect = 8e-67, Method: Composition-based stats. Identities = 161/180 (89%), Positives = 169/180 (93%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MTLKEL +G GT +RSIWMIG+ AF KRETRMYP+ PV PPR+RGRIVLTRDPDG+ERC Sbjct: 1 MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERC 60 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 VACNLCAVACPV CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF Sbjct: 61 VACNLCAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 EMGE+KRQDLVYEK+DLLISGPGKYPEYNFYRMAGMAI GKDKGEAENEAKPIDVK LLP Sbjct: 121 EMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGKDKGEAENEAKPIDVKGLLP 180 >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 249 bits (635), Expect = 3e-65, Method: Composition-based stats. Identities = 147/179 (82%), Positives = 163/179 (91%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 + +++ G GTQ+RS+ M+ H F KR+T YPEEPVYLPPRYRGRIVLTRDPDGEERCV Sbjct: 4 YIGDIVKGTGTQLRSLVMVFGHGFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACNLCAVACPVGCISLQKAET+DGRWYP+FFRINFSRCIFCGLCEEACPTTAIQLTPDFE Sbjct: 64 ACNLCAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 123 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 M E+KRQDLVYEKEDLLISGPGK P+YNFYR+AGMAI GK KG A+NEA+PI+VKSLLP Sbjct: 124 MAEFKRQDLVYEKEDLLISGPGKNPDYNFYRVAGMAIAGKPKGSAQNEAEPINVKSLLP 182 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 229 bits (585), Expect = 3e-59, Method: Composition-based stats. Identities = 136/179 (75%), Positives = 158/179 (88%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 T+K+ ++G T VRS+WM+ HA R+T +YPE PV +PPR+RGRI+L+RDPDG+ERCV Sbjct: 4 TIKKTVIGLFTIVRSMWMVNSHALRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACNLCAVACPVGCISLQKAE +DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ+TPDFE Sbjct: 64 ACNLCAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFE 123 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 MGEY RQDLVYEKE LLISGPGKYP+YN+YR+ GMA+ K KG A+NEA PID++SLLP Sbjct: 124 MGEYVRQDLVYEKEHLLISGPGKYPDYNYYRVTGMAVADKPKGAAQNEAAPIDLRSLLP 182 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 195 bits (496), Expect = 6e-49, Method: Composition-based stats. Identities = 94/175 (53%), Positives = 118/175 (67%), Gaps = 1/175 (0%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 ++ F +++ H F + T YPE PRYR RIVLTRDP+G ERCVAC L Sbjct: 11 IITDFKAIATGLFVTWKHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYL 70 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 C+ ACPV CIS++ E +GR Y +FRINFSRCIFCGLC EACPT AIQ+TPD+E+ E Sbjct: 71 CSAACPVDCISMEATEDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICER 130 Query: 126 KRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 +LVYEKEDLLI G GK P YNFYR AG+ + + +G E E +P+D + L+P Sbjct: 131 DIMELVYEKEDLLIDGCGKDPAYNFYRHAGIGVT-QPRGAGEREEEPVDARGLMP 184 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 179 bits (453), Expect = 5e-44, Method: Composition-based stats. Identities = 86/158 (54%), Positives = 103/158 (65%), Gaps = 7/158 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 L+ +VGF T +R + T YPEE LPPR+RGR VLTRDPDG+ERCV Sbjct: 4 VLRSWIVGFWTTLRQLG-------RWPVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCV 56 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 AC LC+ CP CI L+ + DGR Y FRINFSRCI+CGLCEEACPT AIQL +F Sbjct: 57 ACELCSAVCPTQCIELEGDDRPDGRRYARTFRINFSRCIYCGLCEEACPTLAIQLLEEFA 116 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 G+ +R D VY K LLI GPGK+P Y +Y AG+ I+ Sbjct: 117 FGKDRRADFVYHKAALLIDGPGKHPHYRYYDHAGVRIE 154 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 172 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 71/131 (54%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 +R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 66 LIRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPA 125 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+Y Sbjct: 126 QAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLY 185 Query: 133 EKEDLLISGPG 143 KE LL +G Sbjct: 186 NKEKLLNNGDK 196 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 171 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%) Query: 1 MTLKELLVG--FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 MTLK LL F ++ + + H F K+ T YP E + L YRG IV R +G+E Sbjct: 1 MTLKSLLKSVLFTEIMQGLKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQE 60 Query: 59 RCVACNLCAVACPVGCISLQKAETKD--GRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 RCV C+LC CP I + + R + + + ++F+RCIFCG C ACP A+ + Sbjct: 61 RCVGCDLCEAICPAKAIRVVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSM 120 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFY----RMAGMAIDGKDKGEAEN 168 T +F + R+ L+Y K+ LL G E Y M G GKD+G Sbjct: 121 TKEFAHSSFTREGLIYSKDQLLALGDRCESESIAYLKVRNMWGAEDSGKDEGRYHF 176 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 170 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 78/186 (41%), Positives = 102/186 (54%), Gaps = 28/186 (15%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MTLK L G ++ + F+K T YP+ PV L PR+ GR VLTR P+G E+C Sbjct: 1 MTLKALAQSLGITLK-------YLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKC 53 Query: 61 VACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + C+LCA ACP I ++ AE G Y + + IN RCIFCGLCEEACPT AI Sbjct: 54 IGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAI 113 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 L DFEM +Y+ DLVY KED+L+ G P+ + EA+ KP+ Sbjct: 114 VLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQ---------------RREAKRTGKPVK 158 Query: 175 VKSLLP 180 V ++P Sbjct: 159 VGYVVP 164 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 70/131 (53%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 64 LFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPA 123 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+Y Sbjct: 124 QAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLY 183 Query: 133 EKEDLLISGPG 143 KE LL +G Sbjct: 184 NKEKLLNNGDK 194 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 166 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 77/147 (52%), Gaps = 19/147 (12%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + GFG + S+ F T YP E V P RY GR L R DG E+C+ C LC Sbjct: 21 VAGFGVTLGSM-------FRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELC 73 Query: 67 AVACPVGCISLQKAETKD------------GRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 A ACP I ++ A+ D G Y ++IN+ RCIFCGLC EACPT A+ Sbjct: 74 AWACPADAIYVEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRAL 133 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISG 141 ++ D+E+ R ++YEK+DLL Sbjct: 134 TMSNDYELAGPTRAGMIYEKQDLLAPP 160 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 73/141 (51%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 R +++ F T YP E + PR+RG L R P GEERC+AC LC Sbjct: 97 LSEIARGMYICLEMYFRAPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 156 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ E DG + I+ ++CI+CG C+E+CP AI TP+ E R++ Sbjct: 157 CPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREE 216 Query: 130 LVYEKEDLLISGPGKYPEYNF 150 L+Y KE LL +G E + Sbjct: 217 LLYNKEKLLENGDKWEQELQY 237 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 13/140 (9%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + GFG R + F T +P E V PRY GR L R PDG E+C+ C LC Sbjct: 58 VAGFGVTFR-------NFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELC 110 Query: 67 AVACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 A ACP I ++ +A+ G Y ++IN+ RCIFCG+C EACPT A+ ++ D+ Sbjct: 111 AWACPADAIYVEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDY 170 Query: 121 EMGEYKRQDLVYEKEDLLIS 140 E+ + R+DL+YEK++LL+ Sbjct: 171 EIWDDNREDLIYEKDELLVP 190 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 64/170 (37%), Positives = 87/170 (51%), Gaps = 7/170 (4%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 GF V + F KR T YPE+P PR+ GR L R PDG E+CV C LCA Sbjct: 40 GFQNPVAGFGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAW 99 Query: 69 ACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 ACP I ++ A+ + G Y ++IN++RCI CGLC EACPT A+ +T +FE+ Sbjct: 100 ACPADAIYVEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFEL 159 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 + R++L+Y K+ LL + GM +G EA P Sbjct: 160 ADSTRENLIYTKDQLLAGLTEGMVDSPHAIFPGMDEGDYYRGLVT-EAAP 208 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 6/148 (4%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 ++ + T ++ + ++ HAF T YPEE LP R RGR LT+ DG ERCV Sbjct: 1 MRTTIHKVITMMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVG 60 Query: 63 CNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C LCA+ CP I ++ A + G Y F+IN RCIFCG CEEACPT AI L Sbjct: 61 CELCAIVCPAQAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVL 120 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGK 144 + +E+ Y R+D++Y K+ L PG+ Sbjct: 121 SNQYELSAYTREDMIYTKDRLTEKTPGE 148 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 162 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 11/175 (6%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDP-DGEERCVACNLCAVACP 71 + + + F+K T YP E + +RGR L RDP +++C+ C C CP Sbjct: 15 IFKGLLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCP 74 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 CI +++ +T++ + + I+ SRCIFC C EACP A+ LT DFE Y R +L+ Sbjct: 75 SRCIYIKREKTEN-KMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLI 133 Query: 132 YEKEDLLISGPGKYPEYN-------FYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 + KE LL + ++ F++ G ID + + E KPI +K ++ Sbjct: 134 FNKEQLLKNWDEFASKWTRDVYFNKFWQPPG--IDPSRWPKTKREQKPIPIKRVI 186 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 162 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 1 MTLKELLVGFGT--QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 +LK+ L F + + + G +AF + T YPEE L PR+RG L R +GEE Sbjct: 17 FSLKDFLSSFMLSELFKGLALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEE 76 Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 RC+AC LC CP I+++ DG + I+ ++CIFCG CEE+CP +I T Sbjct: 77 RCIACKLCEAICPAMAITIESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETS 136 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 E R DL + K+ LL G P+ Sbjct: 137 ILEYHGESRSDLYFTKDMLLAVGDRYEPQ 165 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 5/165 (3%) Query: 11 GTQVRSIWMIGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCA 67 G +W++ + F + T YP E +PPRYRG L R G ERC+ C LC Sbjct: 30 GELFVGLWVVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCE 89 Query: 68 VACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 C CI+++ + DGR + + IN RC++CGLC + CP AI ++E+ +R Sbjct: 90 KICVANCIAMETSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQR 149 Query: 128 QDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 + KEDLLI G AG ++ G A + P Sbjct: 150 AYYGF-KEDLLIRGENLCLNGAAQEFAGYGSLDENAG-ARIKVTP 192 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 161 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 74/139 (53%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + L+ R +++ + F + T YP E L R+RG L + +GEERC+A Sbjct: 13 ITNLIRSALLNCRGMYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIA 72 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C LC CP I+++ E DG + I+ ++CI+CG C+EACP AI P+FE Sbjct: 73 CKLCEAICPAQAITIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEY 132 Query: 123 GEYKRQDLVYEKEDLLISG 141 R++L+Y K LL +G Sbjct: 133 ATETREELMYNKSKLLHNG 151 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 159 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 6/148 (4%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 +L G + + + F K T YPE + R+RGR L R +G ERC+ C+L Sbjct: 1 MLKGTMAYFKGLKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSL 60 Query: 66 CAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 CA ACP I + + G + + IN RCIFCG CE+ACPT AI L Sbjct: 61 CAAACPADAIYVVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQ 120 Query: 120 FEMGEYKRQDLVYEKEDLLISGPGKYPE 147 +E+ Y R+ +Y ++ LL++ + E Sbjct: 121 YELAFYDRRASIYTQDMLLVAVDKGHGE 148 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 158 bits (400), Expect = 7e-38, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 13/157 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M + + L GF +R + F R T YPEE PPR+ GR VL R PDG E+C Sbjct: 3 MGVLDALGGFRLTLRQV-------FEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKC 55 Query: 61 VACNLCAVACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + C LCA ACP CI ++ + T G + + IN+ RCI C LC EACPT AI Sbjct: 56 IGCELCAGACPARCIYVRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAI 115 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFY 151 + FE R+D +Y K +L++ G + Sbjct: 116 TESKMFEFAFTNREDAIYTKAELVVDDEGHPRRQPWE 152 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 158 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 1/139 (0%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPV 72 + +++ TR YP+EP + R+RG VL DP+ GEE+C AC LCA ACP Sbjct: 7 FKGFYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPN 66 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I++ +P + I RC+FCGLC EACP AIQ++ FE+ R +L+Y Sbjct: 67 NVITMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNLLY 126 Query: 133 EKEDLLISGPGKYPEYNFY 151 +K+ LL G G Y E Sbjct: 127 DKQRLLELGRGIYDEVEQT 145 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 157 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACP 71 + + + H F K T+ YP+E + +RGR L RD + G RCVAC CA CP Sbjct: 20 IAQGLALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCP 79 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 CI ++ + DG + + I+ RCI+CG C E CP AI LT + RQ+ V Sbjct: 80 SHCIRIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFV 139 Query: 132 YEKEDLLISGP 142 +++ LL + Sbjct: 140 FDEAHLLRNWD 150 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 76/144 (52%), Gaps = 7/144 (4%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLCAV 68 FG +R + K YPEE V + PR+RGR L R D + E+CV C+LCA Sbjct: 28 FGETLRGLKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAA 87 Query: 69 ACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 ACP CI + AE G Y + IN SRCIFCG CE ACP AI + D+EM Sbjct: 88 ACPADCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEM 147 Query: 123 GEYKRQDLVYEKEDLLISGPGKYP 146 +Y R DL++ KE LL + P Sbjct: 148 SDYNRDDLIFTKEMLLAEPLERTP 171 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 155 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 7/145 (4%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + + H + ++ET YPE+ P +RG +L RD +G E C AC LCAVA Sbjct: 24 LWNIIKGMIITFKHIWKRKETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVA 83 Query: 70 CPVGCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 CP I+++ AE K G Y + IN RCIFCG CEEACP AI LT F Sbjct: 84 CPAEAITMEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAP 143 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPE 147 YKR+ +Y K+DLLI P + + Sbjct: 144 ANYKREGFIYGKQDLLIPTPAEKKK 168 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 68/121 (56%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP E L PR+RG L R P GEERC+AC LC CP I+++ E +DG Sbjct: 131 VTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRR 190 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEY 148 + I+ ++CI+CG C+EACP AI P+FE ++L+Y+KE LL +G E Sbjct: 191 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEI 250 Query: 149 N 149 Sbjct: 251 A 251 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 154 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 81/193 (41%), Gaps = 19/193 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLH--------AFAKR--------ETRMYPEEPVYLPPRY 44 M E++ G GT + KR T YPEE P Y Sbjct: 16 MYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNVTLQYPEERAPYAPAY 75 Query: 45 RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFC 102 RG L DG+ RCVAC +CA CP CI ++ AE D YP F I+ RCI C Sbjct: 76 RGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVC 135 Query: 103 GLCEEACPTTAIQL-TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGK 161 G C EACP AI++ + + Y+R +++++ LL P Y + R +I Sbjct: 136 GFCVEACPKDAIRMDSGEHTPPSYERSAQIWDEKRLLRGPPVSYQYDPWLRRGSPSIPPD 195 Query: 162 DKGEAENEAKPID 174 E AKP Sbjct: 196 KLEEMRARAKPFP 208 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 6/145 (4%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + G + + F K T YP PR+RGR L +G E CV C LC Sbjct: 1 MNGVAAIAKGMATTLKVLFRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELC 60 Query: 67 AVACPVGCISLQKAET------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 VACP I++Q AE G Y ++++ RCIFCG+CEEACPT + LT +F Sbjct: 61 QVACPAAAITVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKY 145 E+ ++ R+ L+ +KE L+ P + Sbjct: 121 ELADFTRESLILQKEQLVNRNPSGF 145 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 2/136 (1%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 F ++ + + F+ T YP+ E RYRG L RD +GE +CVAC LCA Sbjct: 17 FADLANALTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCAR 76 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP CI + E + G +P F I+ +RC+FCGLCE+ACP AI L +E + Sbjct: 77 ICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSA 136 Query: 129 DLVYEKEDLLISGPGK 144 DLV ++DLL + PGK Sbjct: 137 DLVIGRDDLL-AKPGK 151 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 79/144 (54%), Gaps = 13/144 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + + L+ G T + H + T YPE+ L P YRG L RD G +C Sbjct: 22 LYIPALVAGLKTTL-------GHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKC 74 Query: 61 VACNLCAVACPVGCISLQKAET-----KDGR-WYPEFFRINFSRCIFCGLCEEACPTTAI 114 VAC +CA ACP CI + A KDGR YPE F I+ RCI+CG+CEEACP AI Sbjct: 75 VACYMCATACPAHCIDIVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAI 134 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLL 138 +LT +++ R+ +V++KE LL Sbjct: 135 ELTTLYDLTGLSREQMVFDKEKLL 158 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 4/165 (2%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCAVA 69 ++ + + F+K T YP E L PRYR L R G ERC+ C LC Sbjct: 44 ADIIKGLGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKI 103 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 C CI + E +DGR + + IN RCI+CGLC E CP AI + FE +R Sbjct: 104 CTSNCIRILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAH 163 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 KED L + ++ + + E + P+D Sbjct: 164 FGL-KEDFLKDLEEAKSHHQLEFAGFGSV--RPSADKEVKQTPLD 205 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 151 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 56/151 (37%), Positives = 74/151 (49%), Gaps = 11/151 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL-----PPRYRGRIVLTRDPDGEER 59 L G + + + F YP+ P L R+RG VL RD +G E+ Sbjct: 2 GYLRNIGAIAKGMGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEK 61 Query: 60 CVACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTA 113 CVAC LCA ACP CI ++ AE + Y + + I+++RCIFCG C EACPT A Sbjct: 62 CVACFLCAAACPSNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDA 121 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDLLISGPGK 144 I FE+ + +LVY KE LL P Sbjct: 122 ITHGHGFELATFNASNLVYRKEQLLSGKPAH 152 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 87/176 (49%), Gaps = 16/176 (9%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 L + G ++ H F+K+ T YPE YL P +RGR +L RD +G ERC Sbjct: 22 YLPAIATGLAITIK-------HFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCT 74 Query: 62 ACNLCAVACPVGCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAI 114 AC LCAVACP IS+ AE G Y + +N RCIFCGLCEEACP A+ Sbjct: 75 ACGLCAVACPAEAISMVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAV 134 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISG-PGKYPEYNFYRMAGMAIDGKD-KGEAEN 168 L D + + +D V +DLL+ +Y + + A+D K GE N Sbjct: 135 YLRHDEFVPVFTERDQVIWGKDLLVEDMNNRYTREAWTKEEARALDAKRASGEVTN 190 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPV 72 +R + H F + T YPEE PR+RG L DP+ GE CVAC LCA CP Sbjct: 75 IRGFLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPT 134 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 C+ + +++G F + RC+FCGLC + CP AI ++ ++E R+ L+Y Sbjct: 135 SCLEMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIY 194 Query: 133 EKEDLLISG 141 K +L G Sbjct: 195 VKTELAAIG 203 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 83/176 (47%), Gaps = 20/176 (11%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 + ++L G T R H K++T YPE+ +PP YRG L +DP+G E+CV Sbjct: 18 YIPQILGGLKTTFR-------HLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCV 70 Query: 62 ACNLCAVACPVGCISLQKAE------TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 +C LC CP I + E T P F I+ RCI+CG+C+E CP AI Sbjct: 71 SCQLCEFVCPPKAIRIWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIF 130 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 L + M Y R ++V K+ L G G P+ +F D K E N+A Sbjct: 131 LQQQYTMTGYTRAEMVNNKQRLYELG-GTLPDQHF------KWDKKKAAELHNKAH 179 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 ++ L G T + + + H + T YPE L PR+RG + DG+ +CV Sbjct: 3 YIRSTLAGMATTFKHL--VDPH----KVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCV 56 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 AC LC CP CI L E + G YP F I+ RCIFCG C+E CP AI L +E Sbjct: 57 ACGLCPTVCPANCIKLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYE 116 Query: 122 MGEYKRQDLVYEKEDLLI 139 EY R VY+ E L Sbjct: 117 NAEYDRASFVYDLERLTA 134 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 79/190 (41%), Gaps = 22/190 (11%) Query: 2 TLKELLVGFGTQVRSIW------------MIGLHAFAKRETRMYPEEPVYLPPRYRGRIV 49 + LL G G + + ++ + T YPEE P YRG Sbjct: 18 YVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRGLHR 77 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG---------RWYPEFFRINFSRCI 100 L DG+ RCVAC +CA CP CI ++ E +D YP F I+ RCI Sbjct: 78 LVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCI 137 Query: 101 FCGLCEEACPTTAIQL-TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 CGLC +ACP AI++ T EY RQ+ VY+ LL P +P + + G Sbjct: 138 VCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIPKLLKGAPVSHPSDPWNKREGSEEP 197 Query: 160 GKDKGEAENE 169 EA Sbjct: 198 HHVHKEAHTR 207 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + H F K T YP+E P +RG L + + +CV C LC CP Sbjct: 5 LINGLKITLKHMFMKPVTLQYPDERPTPSPNFRGLHAL-KVSHSKAKCVCCYLCPTVCPA 63 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 CI+++ E ++ Y E + I+ RCIFCG C EACP A+++T +FE+ YKR+D V+ Sbjct: 64 KCITVEAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVF 123 Query: 133 EKEDLL 138 KE LL Sbjct: 124 VKERLL 129 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 9/137 (6%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V+ + + H F K+ T YPE+ + P YRG+ +L RD G E C AC LCA++CP Sbjct: 33 IVKGLLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPA 92 Query: 73 GCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM--G 123 I+++ AE K Y E + IN RCIFCGLCEEACP AI LT + Sbjct: 93 EAITMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPS 152 Query: 124 EYKRQDLVYEKEDLLIS 140 Y+R++ ++ K+ L++ Sbjct: 153 NYERENFIFGKDKLVMP 169 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 146 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 7/142 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 +K LL G GT + + + G F + T YPE L PR+RGR+++ D +G + Sbjct: 8 YIKGLLHGIGTLLTGMKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNK 67 Query: 60 CVACNLCAVACPVGCISLQ-----KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C+AC LC +ACP I++ ET + + + C+FC LC ACP AI Sbjct: 68 CIACGLCQMACPNDTITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAI 127 Query: 115 QLTPDFEMGEYKRQDLVYEKED 136 + +FE + R LV Sbjct: 128 RFDTEFENAVFDRSKLVLTLNK 149 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVAC 63 EL +G +R + T +YP E L RYRG L R G ERC+ C Sbjct: 31 ELFIGLWVVLREMLKKNNS-----HTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGC 85 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ DGR + INF RC++CGLC + CP AI D+E Sbjct: 86 GLCEKICVSNCIRMETTLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFA 145 Query: 124 EYKRQDLVYEKEDLL 138 +R ++K+ L Sbjct: 146 SEQRAFFGFKKDLLT 160 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 48/141 (34%), Positives = 63/141 (44%), Gaps = 8/141 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVAC 63 +L G G ++ F+ T YP E + L PRYR L R D G ERC+ C Sbjct: 33 DLFKGLGLTIKEF-------FSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGC 85 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI + + +D R + + IN RCI+CGLC E CP AI + FE Sbjct: 86 GLCEKICTSNCIRIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENA 145 Query: 124 EYKRQDLVYEKEDLLISGPGK 144 +R + E L K Sbjct: 146 STQRSQYGSKSEFLTSEQDAK 166 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 142 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 8/145 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACN 64 E+L+G ++ + T YP LP YRG + L R D E+CV C+ Sbjct: 14 EILLGMRETLKHFLK------YRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCD 67 Query: 65 LCAVACPVGCISLQKAE--TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 LC ACP I + AE + + + + + ++ +RC+FCGLC +ACP A+ ++ +FE Sbjct: 68 LCEAACPSRVIRVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEW 127 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPE 147 Y ++ L KE LL G +PE Sbjct: 128 AVYDKRHLHLNKEQLLAIGDRAFPE 152 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 142 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 7/142 (4%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEE 58 + + + G T + + T YPEE + P YRG L +D +G Sbjct: 22 LYVPLFVQGLTTTFKHLK---KSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRV 78 Query: 59 RCVACNLCAVACPVGCISLQKAETK--DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +CVAC LCA ACP CI + AE+ D YP+ F I+ RCI+CG+CEEACP AI+L Sbjct: 79 KCVACFLCATACPAHCIDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIEL 138 Query: 117 TPDFEMGEYKRQDLVYEKEDLL 138 T + + R+++V++KE LL Sbjct: 139 TSLYNLTGRSREEMVFDKEKLL 160 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 51/157 (32%), Positives = 68/157 (43%), Gaps = 7/157 (4%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVAC 63 EL VG +R + A T YP E V L RYR L R + E ERC+ C Sbjct: 32 ELFVGLFVMMRELLKRNNSA-----TIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGC 86 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ + ++GR E + IN RCI+CG C E CP AI ++E Sbjct: 87 GLCEKICISNCIRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENA 146 Query: 124 EYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG 160 +R Y K+D L + F + D Sbjct: 147 AEQRSYFGY-KQDFLTPIDKLKNQVEFEGAGSLRKDA 182 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 14/150 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVY-----LPPRYRGRIVLTRDPD 55 M++ + G + + + F E YP+ P L R+RG VL RD + Sbjct: 23 MSIVSNVTGIA---KGMSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDEN 79 Query: 56 GEERCVACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEAC 109 G E+CVAC LCA ACP CI ++ A+ + Y + + I+++RCIFCG C EAC Sbjct: 80 GLEKCVACFLCAAACPSNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEAC 139 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKEDLLI 139 PT AI FE+ +++ KED+L+ Sbjct: 140 PTDAITHGHGFELASMHATNMIMRKEDMLV 169 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 7/135 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVAC 63 EL VG + + +H T YP E + L RYR L R D G ERC+ C Sbjct: 31 ELFVGLWLVFKELCKAQIH------TVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGC 84 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ + +D R + INF RCI+CGLC E CP AI +E Sbjct: 85 GLCEKICVANCIRMETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENA 144 Query: 124 EYKRQDLVYEKEDLL 138 +R +K+ L Sbjct: 145 CEQRASFALKKDMLT 159 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 9/142 (6%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLT-RDPDGEER 59 + L E+L G G R I FA T YP+ P +RGR VL RD ER Sbjct: 19 LYLPEVLKGLGYTFRQI-------FAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGER 71 Query: 60 CVACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CVAC LC+ CP IS+Q ET+ + +P F IN RCI+CG CEE CP AI ++ Sbjct: 72 CVACGLCSRVCPPMAISIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSD 131 Query: 119 DFEMGEYKRQDLVYEKEDLLIS 140 ++++ R++ + +K LL+ Sbjct: 132 EYDITFNNRENAIMDKSKLLVP 153 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 8/142 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERC 60 T K ++ G G R + F T YPE+ +PP +RG VL D GE +C Sbjct: 13 TGKSIVTGLGITFREM------MFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKC 66 Query: 61 VACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 +C CA ACPV I+++ + + + + F I+ SRC+ C C EACP ++ + D Sbjct: 67 TSCMQCAQACPVNVITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYD 126 Query: 120 FEMGEYKRQDLVYEKEDLLISG 141 +E+ + ++LV+E EDLL G Sbjct: 127 YELCKVNPENLVFEFEDLLRLG 148 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 19/171 (11%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKR---------ETRMYPEEPV--YLPPRYRGRIV 49 L+ +L G +R + + L + T YPE +LP YRG V Sbjct: 17 FYLQSILGGLWLTIRHLVLALLGKSRNKKELAGSGIGVTMQYPEARWDKHLPKYYRGAPV 76 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW-----YPEFFRINFSRCIFCGL 104 L + DG ERCV+C LC CP I++ ++G W P F+I+ RCI+CG+ Sbjct: 77 LVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGPWGKVEKAPREFQIDMLRCIYCGM 136 Query: 105 CEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG---PGKYPEYNFYR 152 CEEACP AI ++ ++ + ++ K L G G ++N Y+ Sbjct: 137 CEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLYELGGTRKGLVNKWNQYK 187 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 59/128 (46%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + + H F K T YP E + R+RG + DG +CV C LC Sbjct: 11 LTEILKGLSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKV 70 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP CI ++ +G + ++ SRCI+CG CEE CP AI + ++ + R + Sbjct: 71 CPSECIHIETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130 Query: 130 LVYEKEDL 137 V + L Sbjct: 131 YVINMKTL 138 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 139 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 1/132 (0%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 +KE+++G + + + + F + T YP E +P R+RG I L D +G RCVA Sbjct: 5 IKEIVLGLWSLIVGMRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVA 64 Query: 63 CNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 C +C ACP GCI + + + + + ++F++C CG C E+C AIQ + + Sbjct: 65 CGMCVRACPSGCIKVSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVYN 124 Query: 122 MGEYKRQDLVYE 133 K++D Y Sbjct: 125 HVSTKKEDFYYN 136 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 139 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 9/141 (6%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACN 64 + G ++ + + T YPE+ R+RG + RD G ERC +C Sbjct: 25 SIGKGLWITLKHFIKAAI--LRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCF 82 Query: 65 LCAVACPVGCISLQKAETK-------DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C CP I ++ E Y + F I+ RCIFCG+CEEACP AI L Sbjct: 83 CCMWICPADAIYIEAGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLD 142 Query: 118 PDFEMGEYKRQDLVYEKEDLL 138 EM R+DL+ KE ++ Sbjct: 143 GPGEMATDNREDLILTKERMM 163 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 139 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEP---VYLPPRYRGRIVLTRDPDGEERC 60 + + G T + F + T YPE +++ PR+RGR+V RD +G RC Sbjct: 10 RGIADGVKTLGVGLKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRC 69 Query: 61 VACNLCAVACPVGCISL-----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 VAC +C ACP I + ET + + ++ + C+FC LC AC AI+ Sbjct: 70 VACTMCEKACPNDTIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIE 129 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 T DFE + R LV + + G G P Sbjct: 130 FTNDFEHAVFDRSKLVLHLDKEVYDG-GSLPH 160 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 14/152 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLH--AFAKRE-TRMYPEEPV---------YLPPRYRGRI 48 + + ++ G GT +R + AK YPE+ P +RG Sbjct: 22 LFVPSIIKGLGTTMRHFVENFGRNGSNAKNIWVVQYPEQKRDDRPVEQGGQFRPTFRGVH 81 Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAET--KDGRWYPEFFRINFSRCIFCGLCE 106 L +D DG RCVAC +CA ACP CI + E+ +D YP+ F I+ RCI+CG+CE Sbjct: 82 RLNKDEDGRVRCVACFMCATACPANCIHIVAEESPWEDREKYPKQFDIDELRCIYCGMCE 141 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 EACP AI+LTP +E+ R +L+++K LL Sbjct: 142 EACPVDAIELTPHYEVTGLTRAELIFDKSKLL 173 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVAC 63 EL G + + + + F+ T YP + + + P YRG I L +D G +C+ C Sbjct: 7 ELFTGGWSLIVGLKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITC 66 Query: 64 NLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C CP CI + + + F ++F++C CG C E CPT A+ + ++E+ Sbjct: 67 GSCMRECPSDCIVVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYEL 126 Query: 123 GEYKRQDLVYE 133 +KR+D Y+ Sbjct: 127 AGFKREDFHYD 137 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 3/141 (2%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 L +L G T ++ + + K T YPEE PR++G VLT DG RC A Sbjct: 15 LPGILGGLATTMKHLLKNLFNQ-KKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTA 73 Query: 63 CNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 C LCA CP CI + AE D +P + I+ RC+FCG CEEACP AI+L P++ Sbjct: 74 CMLCATNCPAECIKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEW 133 Query: 121 EMGEYKRQDLVYEKEDLLISG 141 + + +Y+ L Sbjct: 134 QTPGVNGANFIYDINHLAYRP 154 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 138 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 13/172 (7%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF---------AKRETRMYPEEPVYLPPRYRGRIVLTR 52 + E+L G R + + T YPEE V P YRGR VL + Sbjct: 18 YIPEILKGMWLTSRRFFHNLFGFIPFFLGTEKDRRIMTVYYPEEQVEYPIAYRGRPVLAQ 77 Query: 53 DPDGEERCVACNLCAVACPVGCISLQKAETKDG----RWYPEFFRINFSRCIFCGLCEEA 108 + DG+ CVAC LC +ACP CI + AE +PE F I+++ CIFCG CEEA Sbjct: 78 NEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQYERWPEVFNIDYAICIFCGNCEEA 137 Query: 109 CPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG 160 CP AI ++ D E+ R+ ++Y KE LL F R + Sbjct: 138 CPEEAIFMSDDCEISMLDRKQMLYTKEQLLTPVADLQKRIEFTRNMYAKWNY 189 >UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B4K6_STRRD Length = 417 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 17/169 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V+ + + H ++ T+ YPE LPPR RG I L EE C C LCA CP Sbjct: 9 LVKGLSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALV-----EENCTVCMLCARECPD 63 Query: 73 GCISLQKAET---------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 CI + + R + F I+FS C++CG+C E CP A+ +P+FE Sbjct: 64 WCIYIDSHKETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYA 123 Query: 124 EYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 E ++LV+EK+ L P A K+ A +P Sbjct: 124 EGDIRNLVHEKDKLAAWAQTVPPPPAHEPNAD---PPKELAAASRPVRP 169 >UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUZ9_SORC5 Length = 224 Score = 137 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 20/157 (12%) Query: 2 TLKELLVGFGTQVRSIWMIG------------LHAFAKRET-RMYPEEPVYLPPRYRGRI 48 + E++ G G ++ + LHA T YPEE P R+RG Sbjct: 35 YIPEMVKGLGITMKHFFKNTKEMVLGQKPDPVLHALEPGVTTISYPEEKRPYPERFRGIH 94 Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFC 102 LT D RCVAC C+ ACP CI+++ AE DG YP F I+ RC+FC Sbjct: 95 RLTLREDNSPRCVACLCCSTACPAQCIAIEPAEYPDGDRRKGYERYPSSFVIDELRCVFC 154 Query: 103 GLCEEACPTTAIQLTPDFEMGEYK-RQDLVYEKEDLL 138 G C EACP AI++ Y R+ +Y ++ L+ Sbjct: 155 GFCVEACPVDAIRMDTGLHAVPYDSREQFIYRRDLLM 191 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 10/180 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 ++ LL G T + F K+ T+ YPE L R+RG +V+ + + E + Sbjct: 6 YIQGLLCGVKTLAVGLRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHK 65 Query: 60 CVACNLCAVACPVGCISL--QKAETKDGRWYPEFFR--INFSRCIFCGLCEEACPTTAIQ 115 CV C LC +ACP I++ + T DG+ + R N C+FC LC ACP AI Sbjct: 66 CVGCGLCMMACPNNSINVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAIT 125 Query: 116 LTPDFEMGEYKRQDLVYEK----EDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 FE + R L+ + LL KDK AE EA+ Sbjct: 126 FDQSFENAVFDRSKLILQLNQPGSRLLEKPARSAAPKAATPADDATTKPKDKPMAEAEAE 185 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 2/136 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 LKE+L G + V + + T YP E V L P +RG I L D G +C+ Sbjct: 4 LKEILEGGWSLVEGMRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCI 63 Query: 62 ACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC C CP I +Q + + G + I+F+RC CG+C E+CPT +Q + ++ Sbjct: 64 ACGTCERMCPSNVIKVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEY 123 Query: 121 EMGEYKRQDLVYEKED 136 E+ R D V + Sbjct: 124 ELAGESRWDGVIDLMQ 139 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 134 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 6/138 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 L L+ G T + F K+ T YPE L R+RG + + + + E R Sbjct: 10 YLGGLIHGISTLATGMKTSIKVYFRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHR 69 Query: 60 CVACNLCAVACPVGCISL--QKAETKDGRWYP--EFFRINFSRCIFCGLCEEACPTTAIQ 115 CVAC LC +ACP I++ + ET+DG+ + + C+FC LC ACP AI Sbjct: 70 CVACGLCQIACPNDTITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAIT 129 Query: 116 LTPDFEMGEYKRQDLVYE 133 +FE + R LV + Sbjct: 130 FDQNFEHAVFDRTKLVLQ 147 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 134 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + + H + T YP E + RYRGRI D +C+AC +C CP+ Sbjct: 24 QGLSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEFD-----KCIACEVCVRVCPINL 78 Query: 75 ISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 + K+ + + I+F CIFCG C E CPT + +T ++E+ + R L Y+ Sbjct: 79 PVVDWVMNKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSLNYD 138 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 13/145 (8%) Query: 10 FGTQVRSIWMIGLHAF-----AKRETRMYPEEPVY--LPPRYRGRIVLTRDPDGEERCVA 62 T + + + HA K+ T YPEE LP YRG L D G ERCV+ Sbjct: 19 ISTLAKGLLITLGHAIAILRGKKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVS 78 Query: 63 CNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C LC CP I++ E P F I+ RCI+CG+CEE CP AI L Sbjct: 79 CQLCEFICPPRAITIIPEEIPSTDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFL 138 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISG 141 D+ + R ++V++K+ L G Sbjct: 139 RKDYAITGLSRAEMVHDKKKLYEIG 163 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 13/134 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K L+ G G ++ H F + T YPE + +P R+ GR D +C Sbjct: 1 MHGKGLIKGLGVTIK-------HFFKPKVTVQYPEVRLPIPERFFGRPQFFYD-----KC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +ACN C ACP I L+ +T D + + + C+FCG+C+EACP AI+ + DF Sbjct: 49 IACNQCVNACPNNVIKLE-TDTVDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDF 107 Query: 121 EMGEYKRQDLVYEK 134 E+ +Y R D+ + Sbjct: 108 ELTQYNRPDIKIQF 121 >UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16 Tax=Actinomycetales RepID=C7Q2E0_CATAD Length = 531 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 22/143 (15%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACN 64 L G T ++++ + T YP+ LPPR RG I L EE C +C Sbjct: 41 GLAKGLATTLKTMTH-------RSVTAQYPDVKPELPPRSRGVIALL-----EENCTSCM 88 Query: 65 LCAVACPVGCISL----------QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 LCA CP CI + + + R + F I++S C++CG+C EACP A+ Sbjct: 89 LCARECPDWCIYIDSHKEVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDAL 148 Query: 115 QLTPDFEMGEYKRQDLVYEKEDL 137 +P+FE E+ DL++EK+ L Sbjct: 149 FWSPEFEYAEFDIVDLLHEKDRL 171 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 74/157 (47%), Gaps = 4/157 (2%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + + E + G T ++ GL + + T YPE + YR + L PDG RC Sbjct: 15 LYIFEAIRGLWTTLKH-AARGLFRYEELPTISYPEGQPEIRNTYRAKHRLMLRPDGTPRC 73 Query: 61 VACNLCAVACPVGCISLQKAETKDGR--WYPEFFRINFSRCIFCGLCEEACPTTAIQL-T 117 VAC +CA ACP CI ++ ++ D R F I+ C+FCGLC EACP A+++ T Sbjct: 74 VACGMCAAACPAHCIFIEATQSDDPRIEKRVMRFDIDHLTCVFCGLCAEACPVDALRMDT 133 Query: 118 PDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMA 154 R+D V DL P YP +MA Sbjct: 134 KQIIFEHRSREDFVAHLYDLTNWDPKDYPNDEQSQMA 170 >UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1 Length = 204 Score = 129 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKR-----ETRMYPEEPVYLPPRYRGRIVLTRDPDGE 57 L + G G ++ + F R ET YPEE P R RG L + DG Sbjct: 43 LPATIKGLGITLKHF---AKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDGA 99 Query: 58 ERCVACNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 RCVAC C CP CI++ AET D YP F I+ RC+ CGLC E+CP AI+ Sbjct: 100 ARCVACMCCPTVCPANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAIR 159 Query: 116 L-TPDFEMGEYKRQDLVYEKEDLLISG 141 + T +R D + K+ LL G Sbjct: 160 MDTGIHAPPVEERGDGIMVKDQLLDLG 186 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 129 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 ++++L GF + + + + G A T YP E + +P R+RG I L DP+ G+ RC Sbjct: 7 IRDVLSGFKSLLIGMRITGREAAKPILTVQYPRETLKMPARFRGHIQLILDPETGKPRCT 66 Query: 62 ACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC LC ACP CI L + D + + ++F++C CG C E CP+ AI+ + + Sbjct: 67 ACTLCEKACPSECIDLDGLRREGDKKKSVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQY 126 Query: 121 EMGEYKRQDL 130 + R+ Sbjct: 127 NVVSLGREQF 136 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 128 bits (322), Expect = 8e-29, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 +E + + H T YP E + R+RGRI D +C+ C Sbjct: 13 QESFRAARYIGQGFIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEFD-----KCIVC 67 Query: 64 NLCAVACPVGCISLQKAETKDGRWYP-EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 +C CP+ + +D R + + I+F CIFCG C E CPT + +T ++E+ Sbjct: 68 EVCVRVCPINLPVVDWNFQQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYEL 127 Query: 123 GEYKRQDLVYEKEDL 137 Y R +L Y++ L Sbjct: 128 SVYDRHELNYDQIAL 142 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 128 bits (322), Expect = 8e-29, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + LL G + +W K T YPE LPPR+ G L E+C Sbjct: 4 LNGTGLLKGLAITFKELW-------KKPVTLEYPEHKEKLPPRFHGSFTLH-----SEKC 51 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC LC ACP I + + ++ + + + C+FCGLC EACPT A+ ++ Sbjct: 52 IACGLCQQACPNKVIKVGSIKDENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEY 111 Query: 121 EMGEYKRQD--LVYEKEDLLISGPGKY 145 E+ +Y+ +D L K + + +G G Sbjct: 112 ELAKYRIEDIKLTLFKREEITTGEGSE 138 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 85/187 (45%), Gaps = 26/187 (13%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAF----------AKRETRMYPEE-PVYLPPRYRGRIV 49 M L + L F +R + + G F T YPEE RGR + Sbjct: 11 MDLWDRLYIFEV-IRGLCITGSVFFGNMWKWLTFRKGALTAYYPEELRADYSSANRGRHL 69 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGR---WYPEFFRINFSRCIFCGLCE 106 LT DG+ +CV+CN+CA CP CI +Q A + P+ F I++SRCIFCG C Sbjct: 70 LTTRADGKVQCVSCNMCATVCPAYCIEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCV 129 Query: 107 EACPTTAIQLTPDF-EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGE 165 EACP AI+++ D + R+++ + +DLL N+ + A G+ Sbjct: 130 EACPEDAIRMSKDTPNFPGFDRENM-WATQDLL---------MNWQPASDAAKSYPGSGQ 179 Query: 166 AENEAKP 172 A E P Sbjct: 180 AHQEVHP 186 >UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Actinomycetales RepID=D2PVJ5_9ACTO Length = 214 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 30/173 (17%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + K L+ G +++ + T YP+ LPPR RG I L EE C Sbjct: 3 LPGKGLIDGLKVTAKTLS-------RRAVTEQYPDVQPELPPRSRGVIALM-----EENC 50 Query: 61 VACNLCAVACPVGCISLQ----------KAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 +C LCA CP CI + + + R + F I+FS C++CG+C EACP Sbjct: 51 TSCMLCARECPSWCIYIDSHTETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACP 110 Query: 111 TTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDK 163 A+ +P+FE E ++L +EK+ L ++ + A ID Sbjct: 111 FDALFWSPEFEYAETDLRNLTHEKDRL--------RDWMWTVPAPQPIDPGPS 155 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 6/154 (3%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 ++ L + + H T YP E + R+RGRI D +C+ Sbjct: 11 YGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFD-----KCI 65 Query: 62 ACNLCAVACPVGCISLQ-KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC +C CP+ + K ET + + I+F CIFCG C E CPT + +T ++ Sbjct: 66 ACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEY 125 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMA 154 E Y R +L Y + L +Y + Sbjct: 126 EFSTYDRHELNYNQIALGRLPMSVIDDYTIRTIW 159 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 66/139 (47%), Gaps = 15/139 (10%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + L+ G G ++S+ +K+ T YP+EP +P R+RG D C+ Sbjct: 1 MNGLVQGLGVTLKSM-------VSKKVTTSYPDEPFLMPDRFRGIQHFIPDL-----CIV 48 Query: 63 CNLCAVACPVGCISLQKAETKD---GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 CN CA CP CI+L D + F +NF CI C LC E CPT AI +T Sbjct: 49 CNQCARICPTDCITLTGKPNPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNH 108 Query: 120 FEMGEYKRQDLVYEKEDLL 138 FE+ Y R DL + E L Sbjct: 109 FELSAYSRDDLFKDVEWLT 127 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 127 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G ++ F K+ T YP+ L R+RG +C Sbjct: 1 MQGKGLLTGMWVTLKEF-------FRKKVTEEYPDVMPDLGDRFRG----GTLKLQTSKC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC +C ACP G I L ++ + + + C+FC LC +ACP I T +F Sbjct: 50 IACGICQNACPNGSIKLTSVRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEF 109 Query: 121 EMGEYKRQDLVYE 133 Y R+DLV++ Sbjct: 110 AFSGYSREDLVFD 122 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 10/126 (7%) Query: 13 QVRSIWMIGLHAF-AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 ++S+ HA ++ T YPEE + PR+RG ++ ERC+ C C CP Sbjct: 4 MLKSMATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQ-----ERCIWCRQCENVCP 58 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I + + ++G E + ++ +CI+C LCEE CP AI LT +FE + DL Sbjct: 59 NDTIQIVTDDMRNG----EQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLA 114 Query: 132 YEKEDL 137 Y KE L Sbjct: 115 YNKEQL 120 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKR--ETRMYPEEP--VYLPPRYRGRIVLTRDPDGE 57 LK + G + + + + + F + T YPE + + RYRGR+ + D DG Sbjct: 14 YLKRCITGPWSLICGLSVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGN 73 Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C AC +C ACP I++ + G+ + +F+ C CGLC EACP AI+++ Sbjct: 74 NHCTACGMCERACPNASINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMS 133 Query: 118 PDFEMGEYKRQDL 130 P FE+ DL Sbjct: 134 PAFEVATTDPNDL 146 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 124 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKR---ETRMYPE--EPVYLPPRYRGRIVLTRDPDGEER 59 ++ G T + + + G + R T+ YP+ E + + R+RG +++ D + R Sbjct: 6 DIFKGIKTLLTGMSVTGKYFLHSRKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHR 65 Query: 60 CVACNLCAVACPVGCISLQ-----KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C C +ACP G I + ET + + F + S C CGLC + CPT AI Sbjct: 66 CTGCQKCEIACPNGTIEIIWDRGIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAI 125 Query: 115 QLTPDFEMGEYKRQDLV 131 + +FE Y R L Sbjct: 126 KWGQNFENSVYDRTALT 142 >UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP4_9GAMM Length = 134 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 67/130 (51%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + + +G+ CV C LCA CP CI++ E + G P+ F I+ +RC++CGLCE+AC Sbjct: 1 MKTNDEGDVNCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDAC 60 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENE 169 P AI+L ++E+ + LV EDL+ + A +A DG K A+ Sbjct: 61 PADAIKLGQEYEVATTTTEALVVHLEDLIAAPRKAEEGAGTVIPASLAKDGSGKTIAQAN 120 Query: 170 AKPIDVKSLL 179 K D LL Sbjct: 121 VKGYDWWQLL 130 >UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6 Tax=Chloroflexi (class) RepID=A7NL08_ROSCS Length = 449 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 71/188 (37%), Gaps = 12/188 (6%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKR------ETRMYPEEPVYLPPRYRGRIVLTRD-PD 55 + LL G R K T YPEE + LP +R +L D Sbjct: 32 GQGLLTGLDVVFRHFRDALTRKLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDET 91 Query: 56 GEERCVACNLCAVACPVGCISLQKAETKD-GRWYPEF--FRINFSRCIFCGLCEEACPTT 112 G+E C +C C CP I + +A G+ P F I + C+ CGLC E CP Sbjct: 92 GQELCTSCFQCQRICPPQVIHMTQARDPSTGKPVPAVAEFLIEYDACMSCGLCAEVCPFD 151 Query: 113 AIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 AI++ +FE L K L Y + A + K ++ + +P Sbjct: 152 AIKMDHEFEYSTDVHGGLTINKAAL-NRPISYYEKIAPTFWAEVKDSALKKLQSNVKRRP 210 Query: 173 IDVKSLLP 180 D+ + P Sbjct: 211 -DLIGVAP 217 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 17/133 (12%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + +L G G ++ H F K+ TR YPE +P R RG + + D RC++ Sbjct: 5 GQGILKGMGITLK-------HLFEKKITRQYPEYKREMPERTRGMLTVDMD-----RCIS 52 Query: 63 CNLCAVACPVGCISL-QKAETKDG----RWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C C CP CI++ Q DG R Y F I+ SRC++C LC E CP I T Sbjct: 53 CLQCMRVCPDHCITIVQDRRDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHT 112 Query: 118 PDFEMGEYKRQDL 130 +FE+ Y R DL Sbjct: 113 EEFEIQAYNRLDL 125 >UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR62_AZOPC Length = 152 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLP--PRYRGRIVLTRDPDGEER 59 +K ++ G V+ +++ L+ K+ T YPE+ + R RG++V++ + + + Sbjct: 3 QIKNIIKGIWHLVQGMYITMLNFLRKKVTEQYPEDRAKVFRYERMRGQLVMSHNEKNQHK 62 Query: 60 CVACNLCAVACPVGCISLQKAE-----TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C +C CP G I + + T+ + + + + C FC +C +CP AI Sbjct: 63 CTVCGICQANCPNGTIRIITKKELDEVTEKEKKTLDKYIYDIGSCTFCSICTISCPQNAI 122 Query: 115 QLTPDFEMGEYKRQDLVY 132 T +FE + R L Sbjct: 123 LWTTNFEHATFTRSKLYM 140 >UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT91_9BACT Length = 145 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 7/137 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 ++ L G T + + + G + T YPE L R+ G + + D +G+ + Sbjct: 4 YIQGLFHGIRTLLTGLKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNK 63 Query: 60 CVACNLCAVACPVGCISLQKAETK-----DGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 CVAC LC ACP G I + R + + C+FC LC ACP AI Sbjct: 64 CVACGLCQAACPNGTIKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAI 123 Query: 115 QLTPDFEMGEYKRQDLV 131 + FE Y R LV Sbjct: 124 RFDTAFEHAVYTRDKLV 140 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G + +W K+ET YPEE + + +RG C Sbjct: 1 MFGKGLLTGMSVTWKHLW-------GKKETVCYPEEKLPMTDNFRG----GNLAMDWRVC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 + C++CA ACP + L + + + + + RC++C LC EACP + D+ Sbjct: 50 IGCSMCANACPNKALDLTIVPDAKKKRHMKSYIHHSGRCLYCNLCVEACPVHTLVWDKDY 109 Query: 121 EMGEYKRQDLVYE 133 + + ++ + ++ Sbjct: 110 AIATWSKETMTHD 122 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 7/136 (5%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 L +L+ G + A +T YP+E + R+RG+ ++ +GE C+ Sbjct: 12 LIDLIKGLSITFKY------QAPKDCQTEQYPQERPVITDRFRGQPMMKLGENGETLCIG 65 Query: 63 CNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 CNLCA+ACP I+++ + + + SRC+FCGLCEEACPT +++L +E Sbjct: 66 CNLCALACPENLIAMKSDRDPVTKKKVMVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYE 125 Query: 122 MGEYKRQDLVYEKEDL 137 M Y R+ +V +++ L Sbjct: 126 MALYSREGMVLDRKVL 141 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 8/131 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 + + + K+ T YP +P+ LP R+RG E+C+ CN C+ Sbjct: 1 MKGLFKGLKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFY-----PEKCIVCNQCSNI 55 Query: 70 CPVGCISLQKAETKDGRWY---PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 CP CI L + D + + INF CI C LC E CPT AI +T +FE+ EY Sbjct: 56 CPTDCIQLTGKKHPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYS 115 Query: 127 RQDLVYEKEDL 137 R DL + L Sbjct: 116 RDDLFKNLQWL 126 >UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0 Length = 202 Score = 122 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 18/146 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIV-----------------LTRDPDG 56 ++ + + + K T YP+E + P R+RG+ G Sbjct: 25 IKGLTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKG 84 Query: 57 EERCVACNLCAVACPVGCI-SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 + RCVAC +C ACP+ + ++ + DG F +N C+FCGLC +ACP + Sbjct: 85 KSRCVACYMCQTACPMPTLFRIEAVQMPDGTKKVVRFDMNLLNCLFCGLCVDACPVECLT 144 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISG 141 ++ EM Y+R V +D+ G Sbjct: 145 MSDIHEMAVYRRSQAVIHMDDMEKIG 170 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 G ++ + + H F T YPEE + + R RG V+ +E C+AC CA AC Sbjct: 9 GGILKGMRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVIWV----KETCIACLACARAC 64 Query: 71 PVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT-TAIQLTPDFEMGEYK 126 PV I+++ + +D + + I+F CIFCGLC E+CPT AI + +E Y+ Sbjct: 65 PVKAINMEVSRGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYR 121 >UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR32_9DELT Length = 223 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 33/165 (20%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE--ER 59 T+++ + G + + + ++ F T YP + V YRG + L + R Sbjct: 23 TIRKTIKGLWSLGVGLKVTSVNFFRPPVTVHYPRQVVPSLEGYRGHVELVPSAEDPGASR 82 Query: 60 CVACNLCAVACPVGCISLQKAETKD-------------------------------GRWY 88 C+ C C CP CIS++ + + R Sbjct: 83 CIGCGACVRICPGACISIKVSHKRPHLAPKKTGKPPDHDQGHFLIPMPKARALPGIARRS 142 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 P F++N++ C CGLC E CP A+ + + + Y R + Y+ Sbjct: 143 PTSFKLNYNYCSLCGLCVETCPAGALAFSSNIYLAGYTRNEFKYD 187 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 15/135 (11%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + K T YP+ LPPR RG I L EE C C LCA CP Sbjct: 9 LAKGLAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGL-----FEENCTVCMLCARECPD 63 Query: 73 GCISLQKAET----------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 CI + + + R + F I+FS C++CG+C E CP A+ +P+FE Sbjct: 64 WCIYIDSHKETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEY 123 Query: 123 GEYKRQDLVYEKEDL 137 E +L +E++ L Sbjct: 124 AETDIHELTHERDKL 138 >UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3 Length = 427 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 19/151 (12%) Query: 1 MTLKELLVGFGTQVR-SIWMIGLHAFAKR---ETRMYPEEPVYLPPRYRGRIVLTRDPDG 56 +TLK V G + + + ++ F + T +YP E + +P R R+ + Sbjct: 24 LTLKHFFVSIGVKRKPQVGVMDADYFTHKDGIVTNLYPHESIPVPDNGRYRLH-----NE 78 Query: 57 EERCVACNLCAVACPVGCISLQKAETK----------DGRWYPEFFRINFSRCIFCGLCE 106 + C+ C+LCA CPV CI ++ ++ R Y F I+ ++C FCGLC Sbjct: 79 VDDCIVCDLCAKVCPVNCIEIEPIKSPVEIGKTSDGSTKRIYAATFDIDMAKCCFCGLCT 138 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 CPT + +T ++ EY +++VY +L Sbjct: 139 TVCPTECLTMTKTYDFSEYDVRNMVYHFAEL 169 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 19/153 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP +P+ + +RG+ E+C+AC C +ACP ++++ K R Sbjct: 15 TVKYPFKPLEVSHGFRGKPQY-----DAEQCIACGACTMACPANALTMETDIIKGTR--- 66 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG-------- 141 +++ RCIFCG CEE CPT AI L+ +FE+ + + DL L Sbjct: 67 -QWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQCQKPFA 125 Query: 142 PGKYPEYNFYR--MAGMAIDGKDKGEAENEAKP 172 P K +Y +GM ID ++ E P Sbjct: 126 PKKEVDYVMALLIHSGMGIDDVEQQRPHFETCP 158 >UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THF2_9MICO Length = 184 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 18/144 (12%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 K +L G ++ + A T YP+ LPPR RG I L EE C +C Sbjct: 7 KGILPGI---LKGLATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALL-----EENCTSC 58 Query: 64 NLCAVACPVGCISLQKAET----------KDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 LCA CP CI ++ + + R + F I+FS C++CG+C E CP A Sbjct: 59 MLCARECPDWCIYIESHKETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDA 118 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDL 137 + +P FE E DL+++K+ L Sbjct: 119 LFWSPQFEYAETSILDLLHDKDRL 142 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 16/152 (10%) Query: 2 TLKELLVGFGTQVRSIW----MIGLHAFAKRETRMYPE-----EPVYLPPRYRGRIVLTR 52 T++ V+S W + + + T YP+ LPPRYRG + + Sbjct: 4 TVRAYTGAIRDTVKSFWHGLSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEV-- 61 Query: 53 DPDGEERCVACNLCAVACPVGCISL--QKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 C C C ACP+GCI + +K + F I+ ++C+FCGLC E CP Sbjct: 62 ---DSGICTGCQACERACPIGCIQISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCP 118 Query: 111 TTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 T +IQ T +FE ++LV+ D + P Sbjct: 119 TGSIQHTREFEGTHKHIRNLVFRWADPMNPFP 150 >UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5 Length = 189 Score = 119 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 11/147 (7%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE-- 58 M + + G R+ + + + T YPEE LP R L D D E Sbjct: 1 MLGEGIAKGLIETARNFFGSFVDK-DRLVTVQYPEERHPLPEASRVFPFLLYDGDDAEKG 59 Query: 59 -RCVACNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFCGLCEEACPT 111 RCV+C++C CP CI+++K+ K ++YP F I+ S C+ C +C E CP Sbjct: 60 LRCVSCHICEKECPPHCITIEKSTDKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPF 119 Query: 112 TAIQLTPDFEMGEYKRQD-LVYEKEDL 137 AI++ FE+ R D L++ KE L Sbjct: 120 DAIRMDTAFELSTSDRFDGLLWTKEQL 146 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G ++ F + T YP+E + + R+RG RC Sbjct: 1 MFGKGLLTGMLITLK-------RFFGRPNTVQYPDEKLPMTARFRG----GALTLDINRC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC LCA+ACP I L + + + + C++C LC EACP A+ ++ Sbjct: 50 IACGLCAMACPNQAIGLATTVDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNY 109 Query: 121 EMGEYKRQDLVYE 133 E Y RQ+L + Sbjct: 110 EAACYLRQNLDVD 122 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 10/151 (6%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E + P+YRG L ++CV CN C CP I + Sbjct: 23 WMGIKYLFKKPVTIKIPFEKIEPAPKYRGFHTL-----DWKKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 E +I++ RC FC C + CPT A+ + + + +D E + Sbjct: 78 TWLEVDGKMEKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTED-ALELFNW 136 Query: 138 LISGPGKYPEYNF----YRMAGMAIDGKDKG 164 + P K E N YR + I+ K G Sbjct: 137 VPIHPDKVRELNEKFGDYRFPVVKIEKKADG 167 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 8/159 (5%) Query: 19 MIGLHAFAKRETRMYPEE-PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 K T P + RYRG V + +C+ C CA CP I++ Sbjct: 16 KAWKFLVRKPVTIEVPNKIRREASERYRGFHV-----NDWGKCIGCGTCAKICPTDAITM 70 Query: 78 QKAE--TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + T++ P+ I++ RC FC LC + C T ++++T ++ +D ++ Sbjct: 71 VEVPDLTQEDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPT 130 Query: 136 DLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 D ++ E+ + + + + + E P++ Sbjct: 131 DKGLNAKKGLYEFGKAPLGWVRDENSELLDLERIEMPVE 169 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 12/133 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G G ++ + T YPE LP R + L D +C Sbjct: 1 MLGKGLLTGMGIVLKKM-------LGPNITEFYPEVMPNLPKTVRSSMGLEPD-----KC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 ++C LCA+ACP I+L + ++ + + + ++ RC+FCGLC EACPT A+ +T +F Sbjct: 49 ISCTLCALACPNKVITLTSEKDENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEF 108 Query: 121 EMGEYKRQDLVYE 133 E + +DL ++ Sbjct: 109 ENSVFYPEDLYWD 121 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 115 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%) Query: 14 VRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++S+ A TR+YPE + LP RG L C+ C CA CP Sbjct: 3 LKSLKYTLKTALTTTEVTRLYPEVMMELPANERGIHEL-----DATTCIGCGSCARVCPN 57 Query: 73 GCISLQKAETKD--GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 CI + + + +F +I++ RC FCGLC + CP + +++ E+ + R+D+ Sbjct: 58 SCIEMVPYKYGNPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDI 117 Query: 131 VYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 VY + R+A K+ E E EAK Sbjct: 118 VYGPD----------------RIAVKKFSDKEVAELEAEAK 142 >UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae RepID=NUOI_CAMFF Length = 165 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 4/148 (2%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVY-LPPRYRGRIVLTRDPDGEER 59 + L + G R + + + + YPE+ + RYRG LT++ G+ + Sbjct: 19 IYLPFIFAGMARTFRHFFRNLKDS-SNIDFLEYPEQKPTDITNRYRGLHRLTKNEKGDLK 77 Query: 60 CVACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQL-T 117 CVAC++CA ACP CI + E + P F I+ C+FCGLC EACP AI++ T Sbjct: 78 CVACDMCATACPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRMDT 137 Query: 118 PDFEMGEYKRQDLVYEKEDLLISGPGKY 145 F R+ + + + L G + Sbjct: 138 GIFTKVGNTRESFLADIKTLSQREEGSF 165 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 9/113 (7%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP +PV + +RG+ RC+ C CA ACP I++ + + Sbjct: 14 ATVEYPFKPVEVAQGFRGKPAYDF-----SRCIGCGACATACPSNAITMDCDLDRGIK-- 66 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 + IN+ RCIFCG CEE CPT AI L+ +FE+ K++D+ E L Sbjct: 67 --SWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRC 117 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 8/127 (6%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +++I + TRMYPE+ L R+RG +L + +C+ C +CA CP Sbjct: 3 LKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQIL-----DKSKCIGCGICANTCPNA 57 Query: 74 CISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPDFE--MGEYKRQDL 130 I + KA G +F +I+ C+FCGLC + CP A+ ++ + ++K +DL Sbjct: 58 AIKIVKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYAKGLVKWKHKDL 117 Query: 131 VYEKEDL 137 + E L Sbjct: 118 LITPEKL 124 >UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdehydrogenase i subunit i 2) (Ndh-1 subunit i 2) n=4 Tax=Hydrogenothermaceae RepID=C0QTC6_PERMH Length = 233 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 28/166 (16%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTR--------------------DP 54 + + H F K T +P E V PR+RG L Sbjct: 28 KGLATTIKHLFRKVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPE 87 Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKD--------GRWYPEFFRINFSRCIFCGLCE 106 GE RC+ C C ACPV I K E D G F ++ +C+FCGLC Sbjct: 88 MGETRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCT 147 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYR 152 ACPT I T +++ Y R+ V +KE L + Sbjct: 148 LACPTACIIHTDIYDLSSYTRRGWVLDKEKLSKIADDFVSRRREEK 193 >UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ75_9SPHI Length = 488 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 18/164 (10%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK-------- 79 R T YP E + +P R R+ + + C+ C+ CA CPV CI ++ Sbjct: 57 RVTTQYPYEAIPVPDNGRYRLF-----NEMDDCIVCDKCAKICPVDCIDIEPIRATGQIG 111 Query: 80 --AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 ++ R Y F I+ ++C +CGLC CPT + +T ++ E D++Y +L Sbjct: 112 TASDGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMIYHFSNL 171 Query: 138 LISGPGKYPEYNFYRMAGMAIDGKDKGEAE---NEAKPIDVKSL 178 + + M K +A+ +AKP K + Sbjct: 172 TPDQVQEKKDLFEQYMKEKEATKKQMAQAKGGETKAKPTVKKPV 215 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 22/174 (12%) Query: 16 SIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 ++ ++ + F T +P+ EPV +P +RG++V D +C+ C LC CP G Sbjct: 6 TLSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVD-----KCIGCKLCMNVCPAGV 60 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY-- 132 + + RC+FC C + CP A++++ +F + Y + D Sbjct: 61 FEYVPE--------IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYDDNLRW 112 Query: 133 ----EKEDLLISGPGKYPEYNF--YRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 E E+++ GK +Y + G + ++ + E P V + P Sbjct: 113 LKNEEIEEMIAQKSGKTKKYRIIAEKCKGCTLCARNCPQNAIEGAPRVVHKINP 166 Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 E+C C LCA CP I +IN +CI CG+C C +AI+ Sbjct: 137 EKCKGCTLCARNCPQNAIEGAPR---------VVHKINPEKCIGCGICATICKFSAIE 185 >UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Flexibacteraceae RepID=C6VZ34_DYAFD Length = 513 Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 32/163 (19%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKR---------------ETRMYPEEPVYLPPRYRGR 47 + L G +R +W K T YP+E + +P R R Sbjct: 12 ISTTLTGMRLTLRHLWNARKS--RKPADIRSSSFYDQQDGIVTIQYPQETIPIPDNGRYR 69 Query: 48 IVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG----------RWYPEFFRINFS 97 + + + C+ C+ CA CPV CI ++ + + R Y F I+ + Sbjct: 70 LH-----NEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASDGSPIRLYAAKFDIDMA 124 Query: 98 RCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS 140 +C +CGLC CPT + +T F+ E +D+VY +L Sbjct: 125 KCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYSNLTTE 167 >UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FHA1_SORC5 Length = 214 Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 18/176 (10%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEP-----VYLPPRYRGRIVLTRDPDG 56 +K + T + + + H F + T YP++ LPPRYRG + + D Sbjct: 6 YIKSISSAANTILEGMAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDI-- 63 Query: 57 EERCVACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACP---TT 112 C C C ACP+ CI++ + + F I+ +C++CGLC EAC T Sbjct: 64 ---CTGCKRCERACPIECIAIDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTG 120 Query: 113 AIQLTPDFEMGEYKRQDLVYE--KEDL--LISGPGKYPEYNFYRMAGMAIDGKDKG 164 AI+ T +FE L + E L L P E A + +++ Sbjct: 121 AIRHTREFEGAAPTLDHLTFRFIPEGLVPLYKAPKDLGEVPVGEYGPHAREARERA 176 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 12/132 (9%) Query: 7 LVGFGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 L F ++++ +A R T YPEE + LP YRG I L +D C+ C L Sbjct: 13 LKAFVDHLQAVGTGLKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDI-----CIGCTL 67 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 CA+ CP + + T+ G+ P IN+ RC+FCG C + CP A++ T + Sbjct: 68 CALICPADAMKMT---TEAGKKLPV---INYGRCVFCGFCVDVCPVDALRETRVHDTIFT 121 Query: 126 KRQDLVYEKEDL 137 R+DLV+ + Sbjct: 122 NRRDLVFRPDKF 133 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP EP+ + +RG+ ++C+ C C ACP ++++ Sbjct: 14 ATSSYPLEPIAVDKNFRGKP-----EQNPQQCIGCAACVNACPSNALTVETDLATGE--- 65 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG-----PG 143 + N CIFCG CEE CPT AI+L+ ++E+ +K++D + + L + P Sbjct: 66 -LAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPF 124 Query: 144 KYPEYNFYRMAGMAIDGKDKGEAENEA 170 + Y +A + +G + E E+ Sbjct: 125 AVQKEIDYAIALLKHNGDSRAENHRES 151 >UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ Length = 160 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 + G ++ I + H F+KR T YP E + YRGRI L E C+ C Sbjct: 6 QNFFEGVKNIIQPIIVGFKHIFSKRHTMKYPYEYIPPTKNYRGRIEL-----DMETCINC 60 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT--------AIQ 115 LC CP I DG+ +P I+F +C FCG C CP + Sbjct: 61 MLCEKYCPDHAIQTY---YVDGKKFPG---IDFGKCCFCGYCVWVCPPNIRKGGEEVCLS 114 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGP 142 L + + + +L+Y + L P Sbjct: 115 LNEEHSFPSFDKAELIYPPQKLQDPPP 141 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V+ + + T +PE L YRG L + C++C CA CP Sbjct: 2 IVKPLINVAKEVLKPPSTLEFPENRENLTDNYRGIHKL-----DMKTCISCAACARICPN 56 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + ET D + + IN RC+FC LCEE CPT + LT D+ Y R+D + Sbjct: 57 QTIDMVDTETPD-KGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIK 115 Query: 133 EKEDL 137 EDL Sbjct: 116 RPEDL 120 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 9/123 (7%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 V +I A K T MYP P +RG I+ D +C+ C+LCA CP Sbjct: 34 VSAISAALRRASKKPMTLMYPTVEEEKPQLFRGFILYDYD-----KCIGCSLCAQICPAR 88 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 I + + D R P + RCI+CGLC + CPT A+ L+ F+ K +D++++ Sbjct: 89 AIKMYRVPG-DKRLRPG---YDVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIFD 144 Query: 134 KED 136 D Sbjct: 145 PID 147 >UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY43_CHLT3 Length = 268 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 32/163 (19%) Query: 3 LKELLVGFGTQVRSIWMIGL----------HAFAKR---ETRMYPEEPVYLPPRYRGRIV 49 + +L G G + + H F + T YP E V P R R+ Sbjct: 12 VTTILTGLGITWKHLLNATKRKGFAGIAEDHYFNQVDGLVTLQYPSEAVPTPSFARYRLH 71 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISL--------------QKAETKDGRWYPEFFRIN 95 + + C+ C+ CA ACPV CI++ ++ R + F I+ Sbjct: 72 -----NEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILGTTSDGTKKRLWIPVFDID 126 Query: 96 FSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 +C+FCGLC CPT + +TP + E+ R+ L+Y ++ Sbjct: 127 MGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLIYHFGNMT 169 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 112 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 24/145 (16%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++++ +G F K T YPEE +P R+R RI L+ E C+ C LC CP Sbjct: 25 EIQTMYHVGKFIFKKPVTIQYPEEKGDIPERFRYRIFLS-----PESCIGCTLCQQICPN 79 Query: 73 GCISLQ------------------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 I ++ + +NF C C CEE CPT AI Sbjct: 80 HSIKMEVWDLSSQNTGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAI 139 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLI 139 LT +FE R Y ++L + Sbjct: 140 YLTHEFETA-RTRNSFTYSPQELTM 163 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 112 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Query: 11 GTQVRSIWMIGLHAF-AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 +++I+ + F R T MYP+E LP YRG I D C+ C+LCA+ Sbjct: 7 ARHLKAIFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDS-----CIKCSLCAMV 61 Query: 70 CPVGCISLQ--KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CP + + K E++ + IN++RC+FCG C + CPT +++ T ++ Y Sbjct: 62 CPADAMKMYVSKEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTY 121 Query: 128 QDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 ++ +Y ++ P P Y+ AI + +G Sbjct: 122 EEQIYPPQEFSKGVPK--PVYDKEPRKVKAILDERRG 156 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 112 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 14 VRSIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++ + + F K TRMYP E Y+ + R R +L D RC+ C C +ACP Sbjct: 3 LKAVLLGFKYLFKKPYTRMYPYKEEAYVTSKTRARHILYMD-----RCIGCRACQLACPA 57 Query: 73 GCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTP--DFEMGEYKRQD 129 I + E + + F I++SRC +CGLC EACP A+ +T + + Sbjct: 58 DAIKMYHVEGDYPKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTNYTMEHLITEDKAT 117 Query: 130 LVYEKEDLLISGPGKY 145 +Y E L GKY Sbjct: 118 TLYTPEMLAKPPEGKY 133 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++I G H+ T YP P+ + +RG+ E+C+AC C A Sbjct: 1 MFKLFKTIAKAGTHS-----TIQYPFAPLEVCDDFRGKP-----EHDPEQCIACAACTQA 50 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP + ++ + R + I+F+RCI+CG CEE CPT AI L+ +FE+ + D Sbjct: 51 CPANALIMETDTENNLRR----WEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKAD 106 Query: 130 LVYEKEDLLISGP 142 L YE+ + ++ Sbjct: 107 L-YEEANFTLAHC 118 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%) Query: 7 LVGFGTQVRSIW----------MIGLHAFAKRE---TRMYPEEPVYLPPRYRGRIVLTRD 53 + G VR + + H F K++ T +P++ + +P R ++ + D Sbjct: 15 VKGLSLTVRHLIGARRARHELDITKDHYFDKQDGVATVQFPKQKMPIPEVARYQLEVEID 74 Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKD----------GRWYPEFFRINFSRCIFCG 103 C+ C+LCA ACPV CI + ++ + R Y E F I+ ++C++CG Sbjct: 75 D-----CIVCDLCAKACPVDCIDILSIKSPEAIGKTSDGSVKRLYAEKFDIDMAKCMYCG 129 Query: 104 LCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 LC CPT I +T ++ K DL+Y D+ Sbjct: 130 LCTVVCPTECITMTNQYDRSTSKLTDLIYGFSDM 163 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 11/163 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + +I + A T +YP + + +RG+I + +C+AC C Sbjct: 3 VRKLLKPLKLISVAKKAGVVTVLYPYQKPLITSEFRGKISI-----DPSKCIACGACVNV 57 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP ++L K E RCIFCG C E CP AI +T +FE+ + D Sbjct: 58 CPPNALTLSKQEN------IIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDD 111 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 L + Y +M I+ E + P Sbjct: 112 LSSTLIHKIYECSNCGSAYITRKMKQFIINRVPVSENYIDLCP 154 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 L G +++I + +R TR+ PE L R+RG L + +C+ C Sbjct: 34 WTLSGGLSMVLKNIKYALKNIPKERVTRLCPEVESPLSERFRGLQTL-----DKSKCIGC 88 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPDF-- 120 +CA CP I + KA G +F +I+ C+FCGLC + CP A+ ++ Sbjct: 89 GICANTCPNSAIKIVKAPIAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYCK 148 Query: 121 EMGEYKRQDLVYEKEDL 137 M ++ +DL+ E L Sbjct: 149 GMVKWAHKDLLMTPEKL 165 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%) Query: 17 IWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 ++ + F T YP +P + +RG+ L D +C+ C C +ACP + Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSD-----QCIVCAACTMACPANAL 55 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 +++ R + F RCIFCG CEE CPT AI+LT DFE+ +QDL E Sbjct: 56 TMRTDPVTGDRTWSLF----LGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETT 111 Query: 136 DLLISGPGKYPEYNFYRMAGMAID 159 ++ + Y+ ID Sbjct: 112 FATVACQECGQPFISYKELNYTID 135 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 109 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 22/146 (15%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVY-LPPRY-------------RGRIVLTRDPDGEE 58 +R++ H KR T YPEE + + Y +GR +L D Sbjct: 7 IIRALNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHD----- 61 Query: 59 RCVACNLCAVACP--VGCISLQKAETKDGRWYPE-FFRINFSRCIFCGLCEEACPTTAIQ 115 C C LC++AC I++ K + + +I++ +C+FCGLC +ACP A+ Sbjct: 62 HCTGCQLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALY 121 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISG 141 +T D+E+ + ++ L+Y L + Sbjct: 122 MTNDYELSSFTKEGLIYTPAQLAVKP 147 >UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SQW6_BOTFB Length = 271 Score = 109 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 31/128 (24%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 R ++++ F T YP E Sbjct: 80 MSELFRGMYVVLEQYFRPPYTIYYPFEK-------------------------------I 108 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ E +DG + I+ ++CI+CG C+E+CP AI +P+ E R++ Sbjct: 109 CPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIVESPNAEYATETREE 168 Query: 130 LVYEKEDL 137 L+Y KE L Sbjct: 169 LLYNKEKL 176 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 109 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 8/133 (6%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E V + YRG L ++CV CN C CP I + Sbjct: 23 WMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTL-----DWKKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM-GEYKRQDLVYEKED 136 E +I++ RC FC C + CP A+ ++ + E+K ++L E D Sbjct: 78 TWIEVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEEL--ELFD 135 Query: 137 LLISGPGKYPEYN 149 + P K+ E N Sbjct: 136 WVPIHPDKFREIN 148 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 109 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 10/116 (8%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + R T YP+ LP R+RG + DP C C +C C Sbjct: 6 KLLPEALKTLGKDRATVSYPKNKRTLPDRFRGAVEFDPDP-----CTGCGMCERHCAADA 60 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 I + + + W + ++C+FCG CEE+CPT AI + DFE+ + R+ Sbjct: 61 IVVGTDDDGNVTW-----EYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESF 111 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 109 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 33/154 (21%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFA------------------KRETRMYPEEPVYLPP 42 M L+ L + + + H T YP E + +P Sbjct: 1 MQLRTLFHIILRLTKPLQLTWQHFVKSIKARNHTSTPIYFQQESGNITLQYPHEKLPVPS 60 Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD----------GRWYPEFF 92 R R ++ + E C+ C+ CA CPV CI ++ D R + F Sbjct: 61 RGRYKLH-----NAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGITSNGMKKRIHAAKF 115 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I+ ++C FCGLC CPT + +TP+++ + Sbjct: 116 DIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 109 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%) Query: 20 IGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 G+ F K T YP+E + LP YRG I L +D C+ C LCA+ CP + + Sbjct: 28 AGIKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDV-----CIGCTLCAMVCPADAMKM 82 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 + K +F IN+ RC+FC C + CP A++ T + R++L++ E Sbjct: 83 VTDQGK------KFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPERF 136 >UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales RepID=NUOI2_AQUAE Length = 208 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 21/145 (14%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRG----RIVLTRDPD-------------- 55 ++ + + +A K T YP E + P R+RG ++V +P Sbjct: 22 IKGLRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILV 81 Query: 56 --GEERCVACNLCAVACPV-GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT 112 G+ RCV C C ACPV ++ + +G+ F +N C +CG C +ACP Sbjct: 82 EYGKSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVD 141 Query: 113 AIQLTPDFEMGEYKRQDLVYEKEDL 137 + T E Y R+D V E L Sbjct: 142 CLYQTDIHENASYTRKDAVLTLEIL 166 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 11/133 (8%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG 85 T YP + PP YRG + C+ C C ACP ++++ Sbjct: 23 KAPVTTSYPFVDIEKPPEYRGIPRI-----DPHLCIGCGACVRACPPDALTIEWDFENGR 77 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP--G 143 + N +RCI C C E CPT A+Q T FE+ ++DL+ + L P G Sbjct: 78 KR----IVFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCG 133 Query: 144 KYPEYNFYRMAGM 156 +Y E+ ++ M Sbjct: 134 RYEEFTERQIGKM 146 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 9 GFGTQVRSIWMIGLHAFAKRETR--MYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 G +R W+I T YPE+PV + RYRG C+AC+ C Sbjct: 18 GMYVTLR-YWLITYQPERGTFTERFEYPEKPVPVAARYRGFHRY-----DLTTCIACDQC 71 Query: 67 AVACPVGCISLQKAETKDGRWYP-EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 A ACPV CI + K + + + F I++S+C+FC LC E CP I + ++ Y Sbjct: 72 AKACPVDCIYIGKERVEGSKGFKITGFAIDYSKCMFCALCVEPCPVDCIFMGATHDLSCY 131 Query: 126 KRQDLVYEKEDL 137 R + + L Sbjct: 132 SRDGCIVDFSRL 143 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 16/138 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++++ + + F K T YP + + YR RI T E C+ CN+C Sbjct: 1 MAHPLKALKEVINNLFTKHSTIEYPYKKIETAETYRARIKFT-----PENCIGCNICVRN 55 Query: 70 CPVGCISLQKAETKD-------GRWYPEFFR----INFSRCIFCGLCEEACPTTAIQLTP 118 CP I + + +D G+ P + I+ RCI+C C E+CP A+ + Sbjct: 56 CPANAIKITQINPQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYAST 115 Query: 119 DFEMGEYKRQDLVYEKED 136 +FE+ + ++DL E + Sbjct: 116 EFELAAFDKKDLQDEFKH 133 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 9/114 (7%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 +I + T YP P+ +P +RG+ V+ E+C+ C C+ ACP + Sbjct: 4 FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVI-----DPEKCIGCTSCSNACPPQALQ 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + + R F RCIFC C++ CPT AI+LT +FE+ +DL Sbjct: 59 VYDEPERGVRVVHLFI----GRCIFCARCQDVCPTGAIKLTKEFELATLSEEDL 108 >UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11 Tax=Chlorobiaceae RepID=A1BF37_CHLPD Length = 228 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 39/169 (23%) Query: 4 KELLVGFGTQVRSIWMIGLHAF--AKR------------------ETRMYPEEPVYLPPR 43 + + G T + + H F KR T YP E + P Sbjct: 6 RNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAIPTPAN 65 Query: 44 YRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE--------------TKDGRWYP 89 R R+ + + C+ C C ACP+GCI+++ + + +++ Sbjct: 66 GRYRL-----ENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWL 120 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 F I+ ++C+ CGLC CPT + +P + E+ RQ+LVY +L Sbjct: 121 PVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVYHFGNLT 169 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + + F + T +PEE R RG IV + +C++C LC CP Sbjct: 5 LKMFGVALKYVFQRPITVRWPEERRDYGDRMRGFIV-----NDRGKCISCQLCEAVCPAK 59 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I DGR YP I++ RCI CG C +ACPT +++ + E+ Sbjct: 60 AIKFHLE--ADGRRYPG---IDWGRCILCGYCVDACPTGSLKYVNNTEIVWTD 107 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 12/137 (8%) Query: 19 MIGLHAFAKRETRMYPEEPVY-------LPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 H T YP + RYRG + E C+ C LC+ CP Sbjct: 8 KALRHLSKAPHTVKYPYQKHTDIEGLELPTERYRGFH-----SNNIETCIGCQLCSKVCP 62 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I+ K E + I++ RC +CG C + CPT ++ LTP +E+ + Sbjct: 63 AAAITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFK 122 Query: 132 YEKEDLLISGPGKYPEY 148 + + K Sbjct: 123 FIPTYEIREKKDKEIHM 139 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 12/128 (9%) Query: 10 FGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 + +I + + R T YP E + R RG I L E+C +C +CA Sbjct: 12 IKATIDAISIAARNFVKPERITIYYPYEKLEYG-RARGWIGLLV-----EKCTSCMMCAR 65 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP I + A +G+ YP I++ RCI C C + CPT A+ T E+ Y + Sbjct: 66 ICPANAIKMYVAP--NGKRYPG---IDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSK 120 Query: 129 DLVYEKED 136 +++Y E Sbjct: 121 EMLYTPEM 128 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 11/119 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP +P P +RG+ + C+ C CA CP I+ D Sbjct: 16 ATLEYPFKPEEAPEDFRGKPEI-----DPSICMGCGACANVCPPDAITCVD----DLERG 66 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL--ISGPGKY 145 ++I + RCIFCG CEEACP +AI+ + ++E+ R+DL E L S GKY Sbjct: 67 LRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGKY 125 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + F TR YP E RG+++ E C C C ACP G I Sbjct: 2 LGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFH-----PEYCEFCGECERACPTGAIE 56 Query: 77 LQKAETKDGRWYPEFF--RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 L A + Y + R + +CIFCG C EACP AI+L + Y+++ Sbjct: 57 LDTAWDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 10/113 (8%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + H+ TR YP E + +P +RG+IV E+C+ C +C CP Sbjct: 7 KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDY-----EKCIGCKICVRDCPARA 61 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 I++ + + + F ++ RCI+C C ++CP A+ T +FE+ + R Sbjct: 62 ITITRVAD---KVFEAEFYLD--RCIYCAQCVDSCPKGALDNTREFELAQIDR 109 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 9/119 (7%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + ++ + +K T YP+EP + P YRGR +C C+LC++ CP Sbjct: 5 KILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHY-----ADLGKCTGCSLCSIECPADA 59 Query: 75 ISLQKAET----KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 I + + + I++ +C++C C CP A T ++ + + + Sbjct: 60 IKMTPIPSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 9/128 (7%) Query: 14 VRSIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V SI + K TR P + + P RG VL +C C++C CP Sbjct: 3 VASISNSLKYLLRKPYTRQVPRIDKPFKTPVTRGSHVLDML-----KCTGCSMCQQVCPA 57 Query: 73 GCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPD--FEMGEYKRQD 129 I + A+ + + F RI+ +C FCGLC E CP A+ +T +E+ + Sbjct: 58 NAIDMVTADGDYPQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKST 117 Query: 130 LVYEKEDL 137 L+ + +L Sbjct: 118 LLRQPIEL 125 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 11/135 (8%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 K L+ +R+I + A T YP E LP +RG I+ + E C++ Sbjct: 10 KNLIRSAIGHLRAISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFEK-----EECIS 64 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C CA CP I + ++GR+YP +++++CIFC C ++CPT A++ + ++ Sbjct: 65 CFRCAHICPANAIQMYA--DQEGRYYPG---VDYAKCIFCHFCVDSCPTAALKPSKIHDV 119 Query: 123 GEYKRQDLVYEKEDL 137 + ++ E + Sbjct: 120 AFKDVESMMITPEQM 134 Score = 65.5 bits (158), Expect = 8e-10, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R P E C+ C LC +CPV I + E K ++ +C CG+C Sbjct: 176 RPRFVAAPLNAENCIGCRLCMFSCPVDAIKSKVEEVK------VTLETDYEKCTGCGICV 229 Query: 107 EACPTTAIQLTP 118 CPT ++LTP Sbjct: 230 RICPTEVLKLTP 241 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 11/106 (10%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG 85 A R T YP P+ PPR+RGR + +C+ C CA CP I + A + Sbjct: 14 AGRVTLPYPFVPLKAPPRFRGRPTI-----DGAKCIGCGACAEVCPPRLIEVNDAAST-- 66 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 +N+SRC +C C+E CPT A+ T DFEM R++L Sbjct: 67 ----RTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLT 108 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 14/121 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 F ++++++ + H K+ TR YP PV P RGR+ + +C+ C C Sbjct: 2 FKSKIKALLLSSRH---KKITRPYPFVPVTPPENLRGRLEV-----DPNKCIGCGNCVRT 53 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ + + + RCI+CG C ACP AI +T ++E+ ++D Sbjct: 54 CPSRLITIENYKDE------RIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKD 107 Query: 130 L 130 L Sbjct: 108 L 108 >UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=C6BS80_DESAD Length = 201 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 30/165 (18%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPP--RYRGRIVLTRDPDG--EE 58 + + + + + + + G + K T YP E V +RG + L P + Sbjct: 7 IWDDVTSLWSLIVGLKVTGKNFVDKNVTLHYPRETVTSGELEGFRGPLELIGKPKDPAKP 66 Query: 59 RCVACNLCAVACPVGCISLQKAETKDGR-----------------------WYPEFFRIN 95 +C+AC +C ACP CI++ KA+ P F + Sbjct: 67 KCIACMMCVTACPSKCITVVKAKAPKPTEAELQAMKEAEERGEKVNKPKAPKEPAKFLYD 126 Query: 96 FSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS 140 FS C CG C E CP A++ + + + R++L K DLL Sbjct: 127 FSLCSLCGSCVENCPAKALRYSSNVYLTVTDRKEL---KMDLLAR 168 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 99.8 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T +P + P R+RG++ + +CV C +C C G I Sbjct: 5 LKILARNVAQGPSTDPFPFAETHTPSRFRGKVTM-----DPAKCVGCAICRHVCAGGAIR 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 ++ E + G F + + C CGLC CPT AI +T D+ + + + + Sbjct: 60 IEPREDRSG----YDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHLQERKYDWAEHH 115 Query: 137 LL 138 + Sbjct: 116 FV 117 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 13/119 (10%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + F+K T YP P P R RG I + E C++C +CA +CP G +++ + Sbjct: 13 ALKNLFSKPVTTSYPFAPAQYPERMRGHIEI-----DIESCISCGMCARSCPPGALTVDR 67 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 A G W + F C+ CG C CP +++ P + + R Y + L Sbjct: 68 AA---GTWTIQRFD-----CVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTTPL 118 >UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibrio RepID=C4XJV9_DESMR Length = 199 Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 30/161 (18%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE--ERC 60 ++E G + + + G T +YP++ V YRG I L D RC Sbjct: 7 VREAATGLKSLFVGLGITGRAFAKPAVTVIYPKQEVTNLDTYRGHIELVGREDNPAMPRC 66 Query: 61 VACNLCAVACPVGCISL----------------------------QKAETKDGRWYPEFF 92 +AC C ACP C+S+ + G P F Sbjct: 67 IACGACTRACPSQCLSVGCPVGAGSGGGDAEALELAGELIPVGTAMAPAPQKGCKVPGVF 126 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 ++S C CG C ACP +++ + R D + Sbjct: 127 IYDYSLCSLCGQCVRACPVDSLRFSQHVYYVGRSRADFRLD 167 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 + T YP EP +P +RG+ T E C+ C C +ACP I L+ ET+D Sbjct: 13 KATYAYPFEPYIVPENFRGQPNYTY-----ELCIGCAACGIACPSNAIELKMNETQDR-- 65 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE-YKRQDLVY--EKEDLLISGPGK 144 + + RCIFCG C+E CPT A++L+ FE+ + + L+ E E GK Sbjct: 66 --LVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKCCGK 123 >UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS07_DESVM Length = 207 Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 27/156 (17%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYP--EEPVYLPPRYRGRIVLTRDPDG--EERCV 61 L + V + + G T YP E +RG I L + +C+ Sbjct: 7 TLADLWSLVVGLGITGKEFCKPGVTVHYPRAEVTPEAAASFRGPIELIGLDKDPAKPKCI 66 Query: 62 ACNLCAVACPVGCISLQKAETKDGRW-----------------------YPEFFRINFSR 98 AC LC ACP CI++ +A T P + +FS Sbjct: 67 ACMLCVSACPSNCITVTRAPTPKPTPEELKAMAEAEARGEKPKKPAPPKAPGTWTYDFSL 126 Query: 99 CIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 C CG C EACP +I + D M KR+D V+++ Sbjct: 127 CSLCGSCVEACPVDSIGFSHDIYMVGTKREDFVFDQ 162 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 99.4 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 11/139 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 L G + ++ + + R + YP+E L YRG I+L + +C++C Sbjct: 15 GLFTGVTDNLAALMIGLKYFVNPRRFSIYYPKEYPELRQGYRGFIILNK-----AKCISC 69 Query: 64 NLCAVACPVGCISLQK-----AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CA CP + + + + + + +F IN+ RCIFCG C + CPT A+ Sbjct: 70 AACARICPSAAMKMIRVPVPHPKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVN 129 Query: 119 DFEMGEYKRQDLVYEKEDL 137 ++ ++ ++ E Sbjct: 130 YHDIVYDNLAEMFWDLETF 148 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 99.4 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++S+ + + R T +YP E LP +RG +V E+C+ C C +ACP Sbjct: 23 LKSLKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVY-----DIEKCIGCGACVLACPNN 77 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA--IQLTPDFEMGEYKRQ 128 C+ + + + + C+FCGLC +ACP A ++ + + K++ Sbjct: 78 CLYRRPGPKTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKK 134 >UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ Length = 166 Score = 99.0 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%) Query: 20 IGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 +G+ F K T YP E ++ R+RG ++ + E+C++C CA ACPV I + Sbjct: 22 VGVKEFVKPTRFTIQYPRERRWVIDRFRGFMI-----NDVEKCISCFQCAWACPVNAIFM 76 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 +A +G++YP I + +CI C C +ACP ++Q T + + V++ ED+ Sbjct: 77 YRAP--NGKYYPG---IRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPEDM 131 >UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Proteobacteria RepID=A0L9R3_MAGSM Length = 598 Score = 98.6 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 29/170 (17%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MT++++L F + F + + P PRYRG + E+C Sbjct: 1 MTIRDVLSPFTAW--------KNLFREPVSIKDPIHR-KAAPRYRGFHK-----NDVEKC 46 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPE--FFRINFSRCIFCGLCEEACPTTAIQLTP 118 + C C C G I + + G RI++ RC +C LC + C T+++ ++ Sbjct: 47 IGCGTCEAICQNGAIDMVENRDVPGNRSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSN 106 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAEN 168 ++ + + ++ PG P+Y G + E Sbjct: 107 AYQWVDSDPKAFMFT--------PGVDPKY-----WDNMEQGYRRPEGHR 143 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 97.9 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 10/108 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP EP + +RG+ C+ C C VACP IS+ + +DG+ + Sbjct: 13 VTSKYPYEPYIVEEHFRGKPTYHY-----TNCIGCAACGVACPSNAISV---KWEDGKKF 64 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE-YKRQDLVYEKE 135 + +R N RCIFCG C+E CPT AI+L+ D+E+ + + L+ E E Sbjct: 65 IK-WRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGE 111 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 96.3 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 10/127 (7%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 + + + + A R T YP E +P R+RGR + +C+ C CA CP Sbjct: 2 SILSKLKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHV-----KCIGCAGCANNCP 56 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I + + RC +CG C + CP AI ++ +FE G K DL Sbjct: 57 SREILINDICQE-----IRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQ 111 Query: 132 YEKEDLL 138 E + Sbjct: 112 QRLELFM 118 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 95.5 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + F T YP ++P RG+ C+AC +C C G I Sbjct: 5 LKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGA-----CIACRMCEHVCAGGAIQ 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 +++ K G F + + C FCGLCE CPT AI+LT D+ + Y ++ Sbjct: 60 IREVADKSG----LEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKG 115 Query: 137 LL 138 + Sbjct: 116 FI 117 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 95.2 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 41/103 (39%), Gaps = 9/103 (8%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP + PP YRG + C+ C C ACP + D Sbjct: 3 VTLKYPFVKLEAPPEYRGIPQI-----DATLCIGCGACVNACPPDAL----LRIDDYNRG 53 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 ++ RCI C CEE CPT AI+LT FE R D V Sbjct: 54 VREIVLDVGRCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHV 96 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 16/125 (12%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 G+ T V+ I + F T YP +P P RG IV + E+C+ C C Sbjct: 2 GYMTFVKRIVA---NLFKPPVTSSYPLQPRTPLPIDRGHIV-----NQWEKCILCGACER 53 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 ACP G I + + IN C+ CG C E CP + + + ++ Sbjct: 54 ACPSGAIRID--------RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKS 105 Query: 129 DLVYE 133 ++V+ Sbjct: 106 EIVHT 110 Score = 58.9 bits (141), Expect = 7e-08, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 8/70 (11%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + +CV C +C C G + + + I+ + C+ CG+C E CP + Sbjct: 196 NDVSKCVLCGMCLRGCVGGALDID--------RKRRTWTIDPAACVQCGVCVEHCPKQCL 247 Query: 115 QLTPDFEMGE 124 L + Sbjct: 248 SLNEAYTFTA 257 Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 8/93 (8%) Query: 34 PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR 93 P+E + R + CV C CP + + + Sbjct: 301 PKETLSGKETERKETEKIPVINDVSECVLCGKYTDGCPGSALEID--------RKNRTWT 352 Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I+ + C+ C +C E CP + + ++ +G Sbjct: 353 IDPAACVQCDICVENCPKQCLSMNKEYVLGADD 385 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 13/124 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + + K TR YP E RG I + E+C+ C +C CP Sbjct: 1 MLSMLKNVVYNLTHKPATRRYPFEKREPFEGTRGHI-----ENDIEKCILCGICQRVCPS 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 CI + + K+G W E F CI CG C +ACPT ++ + ++ +++ +V Sbjct: 56 NCIQVDR---KEGTWKFEPF-----ACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQ 107 Query: 133 EKED 136 +KE Sbjct: 108 KKET 111 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%) Query: 22 LHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE 81 F T YP E P RGRI + + C+ C LCA CP G I+++K E Sbjct: 12 KSIFHGPYTVRYPLEKKEPFPASRGRIEINI-----QDCIFCGLCARRCPTGAINVEKPE 66 Query: 82 TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 ++ + IN RCI CG C E CP +++ + ++ + VY+ Sbjct: 67 SR--------WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQ 110 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 93.6 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 11/116 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + T YP P ++P + RG++ + + C AC C CP G I Sbjct: 5 LKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKV-----DAKACTACGTCEEVCPSGAIH 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 + K E ++ C FCG CE CPT AI+LT DF + + + Sbjct: 60 ITKNEN------VYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKF 109 >UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK Length = 147 Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 15/128 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + ++ + F+ TR YP+E P RG IV T E C+ C C CPVG Sbjct: 1 MKMLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTV-----EECMTCRRCERTCPVG 55 Query: 74 CISLQKAETKD----------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 I ++ + G R + +CI+CGLC E CP I Sbjct: 56 AIKVEIGPRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSP 115 Query: 124 EYKRQDLV 131 ++++ V Sbjct: 116 ATRKEEKV 123 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 92.8 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 25/170 (14%) Query: 20 IGLHAFAK-RETRMYPEEPVY-LPPRYRGRIVLTRDPDGEERC-VACNLCAVACPVGCIS 76 +H + RET +P P LP R+ G + + +C C CA CP I+ Sbjct: 6 TLIHRLKRGRETMAFPNGPAPALPDRHGGALRV-----DASKCADGCAACAEVCPTQAIT 60 Query: 77 LQKAETK-----DGRWYPE-------FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 + ++ DG P ++ RC+FC C + CP AI T D M Sbjct: 61 VADSKVAPPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAV 120 Query: 125 YKRQDLVY-----EKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENE 169 +R+DLV E+ L + K + + + G E + Sbjct: 121 RRREDLVLGAPGQEEVRLAAALDEKLRKMFGRSLRLRQVSAGGSGAEEAD 170 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 91.7 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 11/118 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + +I K T YP + L PRY GR L C C C ACP Sbjct: 2 LRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLI-----PVDCGDCRACYAACPTAA-- 54 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 L E G ++ RC FCG C ACP AI T + M ++R+DL+ Sbjct: 55 LLPTEGVPG----STPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDLLIVP 108 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 11/147 (7%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + T YP E + +RG I+ ++C++C C+ CP I ++ E Sbjct: 34 SVYPHTMTVFYPRERKKMSDNFRGFILF-----DPDKCISCFNCSFVCPANAIRMK--EA 86 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 + R+YP I++ RCIFC C ++C A++ T ++ YK D ++ + +I P Sbjct: 87 PNKRYYP---TIDYGRCIFCHFCIDSCSGGALKATKIHDVA-YKDMDEMFTPTEEMIELP 142 Query: 143 GKYPEYNFYRMAGMAIDGKDKGEAENE 169 E Y + D + E Sbjct: 143 EIIREDKKYVEYVIEEDDLHLKRTKGE 169 Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 10/94 (10%) Query: 25 FAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD 84 + + Y V P +I + C+ C +C C G IS Sbjct: 163 LKRTKGEDYLFVEVPPPI----QIPMVSQCIDRASCIGCRVCEEMCESGAIS------SS 212 Query: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 +I+ +C CGLC + C ++L Sbjct: 213 AENGMLRMKIDTDKCTGCGLCVKECSMQILKLKK 246 >UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8 Length = 127 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 13/115 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + F+K TR+YP+E RG + + D +C+ C +C CP I+ Sbjct: 5 LQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEID-----KCIFCGICQRKCPANAIT 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 + + + +++N +C+ C +C E+CP + F + ++ + Sbjct: 60 VDRN--------AKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKEFYI 106 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + +K ET YP P P YRG I+ EE C+ C+ C CP Sbjct: 1 MIQMFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILYN-----EELCIFCDKCENICPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 G I + + + G+ + N CI+CG C +ACP Sbjct: 56 GAIKFEVVDIESGKK---QYNYNPYLCIYCGACVDACPK 91 Score = 40.1 bits (92), Expect = 0.039, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 18/42 (42%) Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 I A + + + Y N CIFC CE CP AI+ Sbjct: 19 IKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKF 60 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 89.8 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 18/114 (15%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET------KDGRWY-- 88 PV PP +RG++ D CV C LCA CP I L + + K+G Sbjct: 45 PVATPPGFRGKLEYDIDE-----CVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAA 99 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 P +I SRC+FCG C + CP ++++ +F + + EDL+I GP Sbjct: 100 PLKIKIYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDKLA-----EDLIIPGP 148 >UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=Wallaceina RepID=Q9MES3_9TRYP Length = 102 Score = 89.8 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 43/89 (48%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T + P E + RG L G ERC+AC LC CP I ++ + G + Sbjct: 1 ITIVLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCEYICPSLAIDVRVLRSLLGFRF 60 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E F +++ RCI+CG C CPT AI + Sbjct: 61 SEIFTLSYRRCIYCGFCMHVCPTDAITHS 89 >UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax=Trypanosomatidae RepID=NDUS8_TRYBB Length = 145 Score = 88.6 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%) Query: 24 AFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK 83 F T P E + RG L G ERC+AC LC + CP + ++ + Sbjct: 17 CFVCCVTICLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCDLICPSLALDVRVGWSF 76 Query: 84 DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 G + ++F +++ RCI+CG C CPT AI + Sbjct: 77 GGHRFADWFTLSYRRCIYCGFCMHVCPTDAITHS 110 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 88.2 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + M F K ET +YP E +G I D C+ C +C CP Sbjct: 4 FKLGKMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDE-----CILCGMCQRVCPSD 58 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 I ++K K+G W I+ RC+ C C ACPT+++ + P++ Sbjct: 59 AIVVEK---KNGTW-----SIDHFRCVQCSACVRACPTSSLSMEPEY 97 >UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WN89_ACTMD Length = 173 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 14/97 (14%) Query: 38 VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD---------GRWY 88 LPPR RG I L E C C +CA CP CI + + R Sbjct: 2 ADLPPRTRGVIALL-----EANCTVCMICARECPDWCIHIDSHTEVEQQPGSARPRARNV 56 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 + F I++ +C++CG+C EACP A+ PDF Sbjct: 57 LDRFAIDYGQCLYCGICVEACPFDALHWAPDFSYPGT 93 Score = 39.3 bits (90), Expect = 0.056, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPE 90 E R R R VL R +C+ C +C ACP + + G P+ Sbjct: 43 EQQPGSARPRARNVLDRFAIDYGQCLYCGICVEACPFDALHWAPDFSYPGTGTPD 97 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 18/108 (16%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T +P + + LP YRGR VL +D E+ A CP G ++L Sbjct: 15 TVEFPSDKIQLPEAYRGRPVLNQDAADED----VQKVASICPTGAVNLNDR--------- 61 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 ++ +C+FCG C + I T D+ M KR+DL+ K+ L Sbjct: 62 ---TLDLGKCLFCGKC-QFIKQNFIIFTRDYRMFALKREDLII-KDTL 104 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 +K + +I+ T YP+E + RG I + C Sbjct: 3 VVKRSFSKLKGHINAIFEAVKEVVRPSTITVQYPKEIRFY-ENIRGYIQVEAIS-----C 56 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 + C CA CP I + + +GR+YP I+F +CIFC C + CPT A++ T Sbjct: 57 LGCARCARICPANAIIM---KNVNGRYYP---TIDFGKCIFCHFCIDVCPTGALRNTTVH 110 Query: 121 EMG 123 ++ Sbjct: 111 DLA 113 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 87.5 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 27/156 (17%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + T YP EP P ++ G + + +C C C ACP G I+ Sbjct: 9 YLKKGVVTSKYPAEPFRAPEKFLGMPAI-----DKSKCDRCGKCLAACPSGAIN------ 57 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 + F I+ RCIFC C + C +AI++T ++E+ K D + Sbjct: 58 -------DNFDISPGRCIFCAACADVC--SAIRMTGEYELASKA-------KPDFDVESS 101 Query: 143 GKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSL 178 G+ E + G ++ ++ ++V SL Sbjct: 102 GRELEKKIKKAFGRSLAIREVDAGSCNGCEVEVNSL 137 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 87.1 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 34/134 (25%) Query: 20 IGLHAFAKRETRMYP----------------------EEPVYLPPRYRGRIVLTRDPDGE 57 I H F K T YP EPV R+RG++ R Sbjct: 9 ILRHLFKKAFTNPYPVSHMPDDLTGVLEAASKGEIDLNEPVETWGRFRGKVGYDR----- 63 Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E+C+ C +C CP I + P+ ++ RC FC C + CP A+ +T Sbjct: 64 EKCIGCGMCMKVCPANAIERAPED-------PKKIIVHNDRCCFCAQCNDICPVDALTMT 116 Query: 118 PDFEMGEYKRQDLV 131 DF + Y+R+ V Sbjct: 117 CDFAISTYERKSNV 130 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 EE CV C +CA ACPVG I E I+ +C+ CG+C CP AI+ Sbjct: 172 EEDCVGCTICAKACPVGAIE---------GKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 87.1 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T P P YRG++ E CV C +C CP G I Sbjct: 4 LSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTF-----DETACVGCKMCEHVCPGGAIR 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 ++ R F I + C+ CGLC C T AI+L+ D+ + + + Sbjct: 59 FEE------RPEGLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQA 112 Query: 137 LL----ISGPGK 144 L+ SG G Sbjct: 113 LVAYAACSGCGT 124 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%) Query: 28 RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW 87 + +P+EPV +PP++RG+ + E C C C CP G I+++ D + Sbjct: 18 PVVKPFPKEPVKVPPKWRGKPLY-----DAEDCTGCRQCERVCPPGAITIE-----DKKG 67 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQ 115 ++I++ CI+C C +ACPTTA+ Sbjct: 68 EFFHYKIDYGVCIYCWYCIDACPTTALT 95 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 48/139 (34%), Gaps = 33/139 (23%) Query: 17 IWMIGLHAFAKRETRMYPEE----------------------PVYLPPRYRGRIVLTRDP 54 + I + K T ++P PV P RG+++ R+ Sbjct: 5 LKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLYDRNL 64 Query: 55 DGEERCVACNLCAVACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGLCEEA 108 C C LC CP I + +D + RI CIFCG C + Sbjct: 65 -----CNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQCIDI 119 Query: 109 CPTTAIQLTPDFEMGEYKR 127 CP AI +PDF + R Sbjct: 120 CPKGAISQSPDFLLATEDR 138 >UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX5_METLZ Length = 124 Score = 85.9 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 13/107 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + I F K T +P P+ RG +V +C +C +C CP Sbjct: 1 MKMLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVF-----DPSKCTSCMMCMKRCPSQ 55 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 I++Q+AE + + ++ RC+ CG C + C + + ++ Sbjct: 56 AITVQRAE--------KIWTLDRFRCVMCGNCVDVCKFDVLSMEREY 94 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 84.4 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 13/112 (11%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + ++ K TR YP P YRG + + D C+ C CA CP CI + K Sbjct: 7 VIMNLLRKPATRQYPFTVRDPFPNYRGELYIDIDG-----CIFCGTCARKCPSQCIEVDK 61 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 + + + C++CG+C + CPT + + ++ +V Sbjct: 62 EQG--------LWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105 >UniRef50_A6GD17 Carbamoyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD17_9DELT Length = 1175 Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 30/139 (21%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 E RCV C CP G +S + ++ R P I+ S C+ C LC E C A Sbjct: 514 WVDESRCVGSGDCVRICPTGAVSFAEPSSEGARRLPV---IDASACVRCQLCVERCEVEA 570 Query: 114 IQLTPD--------------FEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 ++ D + E +++ E +L PG+ +D Sbjct: 571 LRPILDTDGSVGGKVLVREALTLAEARKRQRPRALEGVLAEPPGR-------------LD 617 Query: 160 GKDKGEAENEAKPIDVKSL 178 + +G+A AKP V L Sbjct: 618 ARKRGDASVSAKPTVVLGL 636 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 17/127 (13%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 + F++ T MYP +P RG + + E+C+AC C CP I + Sbjct: 8 KTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIV-----PEKCIACRTCQRKCPTQAIIV 62 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 E + ++I+ RCI C C E CPT + + + R ++ + Sbjct: 63 DVKE--------KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTARGGIM----KV 110 Query: 138 LISGPGK 144 ++GP K Sbjct: 111 TVAGPKK 117 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 13/111 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + F TR+YP + +G + L D +C C +C + CP CI Sbjct: 4 LNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVD-----KCTFCTVCQIKCPSQCIQ 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 + + E + +RI+ C++CG+C + CPT+ ++ + Y + Sbjct: 59 VDRKERQ--------WRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSK 101 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 13/104 (12%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + M F K ET MYP E RG + + ++CV C++C CP Sbjct: 3 NFKLGKMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVE-----PQKCVLCSICQRVCPT 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 I + + IN+ C+ CG C ACP A+ + Sbjct: 58 DSIVVD--------KKGASWTINWFSCVICGECVRACPHDALDM 93 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 13/103 (12%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + K TR+YP E ++GRIV E C+ C LC CP I+ Sbjct: 4 LNLVLTNISRKPATRLYPFEIREPFKEFKGRIVF-----DPENCILCGLCQKKCPPDAIT 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 + KA+ + + +N RCI C C CP + ++ + Sbjct: 59 VTKAD--------KTWELNLFRCIMCTECVNGCPKGCLSISNE 93 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 22/119 (18%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC 102 R+RGR+ R +C+ C +C CP I P ++ RC FC Sbjct: 54 RFRGRLNYDR-----AKCIGCGMCTKVCPARAIVFDPDTEGQK---PRKVMLHGDRCCFC 105 Query: 103 GLCEEACPTTAIQLTPDFEM-------GEYKRQD------LVYEKEDLLISGPGKYPEY 148 C + CP +A+ +T DF R+D L ++KE L PG+ E+ Sbjct: 106 AQCNDVCPVSALSMTTDFAFSSSGDRKAGTTRKDTGKAVRLPFQKE-WLDPKPGEVEEF 163 >UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V7_GEOUR Length = 124 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 14/128 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + T MYP+ RGRI + +RC+ C +C CP Sbjct: 3 IFTMTKTVTKNLVTGPATLMYPQRERIFTAITRGRI-----ENAIDRCIFCGMCGRRCPT 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I++ K + ++I+ +C C LC E CP + + +RQ + Sbjct: 58 YAITVTKE--------SKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQ-MGI 108 Query: 133 EKEDLLIS 140 +KE + +S Sbjct: 109 QKESITVS 116 >UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5M7_CHRVI Length = 139 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 13/118 (11%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 ++ A AK TR+YP E R RG I D C C +CA CP I + Sbjct: 13 LVTRSALAKPATRLYPAERRTPYARTRGHIEFRID-----TCNFCTICAHKCPTQAIQVS 67 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 K + + + I+ SRCI C +C E C I L+P ++ L + +E Sbjct: 68 KLD--------KTWAIDHSRCILCSICVEDCREGCITLSPLPCPPMRAKEVLTFRQEH 117 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 13/107 (12%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + + T YP +P + P RG +V+ D C+ C LC + CP I + K Sbjct: 10 VLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDD-----CIFCGLCKMHCPADAIEVSK 64 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 + +R+N +C+ CG C CP + + + Sbjct: 65 PD--------RTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 82.4 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 12/113 (10%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY-RGRIVLTRDPDGEERCVACNLCAV 68 + +++ + T Y +L + RG +L RD +C+ C+LCA Sbjct: 4 YRSKLEILKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLLDRD-----KCLGCSLCAR 55 Query: 69 ACPVGCISLQKAETK---DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 +CP G I++ K + N+ +CI+CG+C E CP AI + Sbjct: 56 SCPSGAITMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVK 108 Score = 41.2 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 15/88 (17%) Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRM 153 ++ +C+ C LC +CP+ AI + P + ++ K P +N+Y+ Sbjct: 42 LDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKE------------VERKIPSFNYYQC 89 Query: 154 AGMAIDG---KDKGEAENEAKPIDVKSL 178 + + + + +P+++ SL Sbjct: 90 IYCGVCAEVCPGRAISMVKKQPVEIISL 117 >UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBL9_9ACTN Length = 113 Score = 82.1 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 13/96 (13%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + T YP+E + P R RG IV + + C+ C +CA CP G +++ Sbjct: 13 SMVKQPVTVCYPQEKLAAPERLRGHIV-----NDMDVCICCGMCARRCPAGALAVD---- 63 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 + I+ C+ CG C E+CP + + Sbjct: 64 ----RKGGTWSIDPYACVVCGECIESCPKHCLTMDT 95 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 82.1 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCI 100 P RYRG + E C+ C+ C CP I+++ K PE +N S CI Sbjct: 35 PARYRGEHRIDY-----ETCIGCDSCNKICPTHAITMKHLPFKKQNIVPE---VNLSVCI 86 Query: 101 FCGLCEEACPTT 112 FCGLCE+ CPT Sbjct: 87 FCGLCEDVCPTK 98 Score = 41.6 bits (96), Expect = 0.013, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 Y RI++ CI C C + CPT AI + Sbjct: 37 RYRGEHRIDYETCIGCDSCNKICPTHAITMKH 68 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 81.7 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 62/156 (39%), Gaps = 20/156 (12%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP P+ LP +RG+ A ACP I + E+ Sbjct: 14 ATTQYPAAPMDLPYGFRGKPEHDEKQCIACAAC-----ASACPPNAIQMTVDESAG---- 64 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL--ISGPGK-- 144 + IN+ RCIFCG CEE CP AI+L +FE+ +DL LL + GK Sbjct: 65 TIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAACGKPF 124 Query: 145 -------YPEYNFYRMAGMAIDGKDKGEAENEAKPI 173 Y E ++G+A + D A+ P Sbjct: 125 APRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPT 160 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 81.7 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 13/111 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + K TR+YP + +RGR+V + E C+ C C + CP CI+ Sbjct: 4 LSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLV-----NKIEDCIFCKSCQIKCPSQCIT 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 + + + C++C +C +ACPT + + ++ Sbjct: 59 VDP--------KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 12/113 (10%) Query: 10 FGTQVRSIWMIGLHAFAKRE-TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 F + I + R T+ ++ ++ P +RG + D C C CA Sbjct: 2 FFNIIEKIVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDI-----CTGCEACAK 56 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT---TAIQLTP 118 CPV I ++ K + PE +N CIFCGLCE+ CPT AI+L+ Sbjct: 57 ICPVDAIVMEPLPIKRPKALPE---VNLGICIFCGLCEDVCPTKPEKAIKLSG 106 >UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDP8_9PROT Length = 168 Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 13/100 (13%) Query: 22 LHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + AF + T+ +EP + P +RGR ++ E C C+ C CPV I ++ Sbjct: 13 MKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKY-----EICTGCDACNKICPVDAIKMKP 67 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPT---TAIQL 116 K PE +N + CIFCGLCE+ CPT AI+L Sbjct: 68 LPIKRPNKVPE---VNLAICIFCGLCEDVCPTKPEKAIKL 104 >UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=B8FCE3_DESAA Length = 347 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 12/92 (13%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 ++C C C ACP+ + L +++ + Y + RCI C C +CP AI Sbjct: 22 DRDKCNGCGRCVKACPIQLLELYGKKSRPNQRY------DHFRCITCQNCAASCPQNAIT 75 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 + D+ R D + K L GP P Sbjct: 76 IKGDY------RVDKGFWKNAHLFRGPKTMPN 101 >UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT Length = 202 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 9/96 (9%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +R I + F+KR T +P E YRG+ + E+CV C C CP Sbjct: 6 IREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFN-----PEKCVGCGACVQVCPAK 60 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 I + + R + ++ CI+CG C+E C Sbjct: 61 AIDMVDDLVEKVR----VLTVKYTDCIYCGQCQEKC 92 >UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (EC 1.6.5.3) n=3 Tax=Eutheria RepID=B4DYI3_HUMAN Length = 171 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 30/61 (49%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 R + M + F + T YP E L PR RG L R P GEERC+AC LC CP Sbjct: 64 LFRGLGMTLSYLFREPATINYPFEKGPLSPRLRGEHALRRYPSGEERCIACKLCEAICPA 123 Query: 73 G 73 Sbjct: 124 Q 124 >UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA6_9ACTN Length = 157 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 15/110 (13%) Query: 19 MIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 M F K T YP E V RG + + C+ C +C ACPVG I+ Sbjct: 1 MTLRSLFGKPATVQYPAEQVPAMSYEHMRGHV-----ECDMDTCILCGMCQRACPVGAIA 55 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 + + K G W I+ RCI C C CP + + + Sbjct: 56 VDR---KGGTW-----SIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97 >UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X547_DESRD Length = 807 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 18/142 (12%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPV--------GCISLQKAETKDGRWYPEFFRI 94 +R R+ P CVAC C+ CP G + + + R P+ + I Sbjct: 235 NFRARLSSAAQPVDPAACVACGACSAVCPEFGHSGFNEGLFARKAIDKDAPRAVPDAYTI 294 Query: 95 NFSRCIFCGLCEEACPTTAIQLT--PDFEMGEYKRQDLVYEKEDLLIS--------GPGK 144 C CG CEE CP AI L P+ + +Y L E L +S P Sbjct: 295 LDDVCTRCGACEEVCPAGAIDLKAEPEERVQDYGAVFLATGFETLDLSQEQAFHTDAPNV 354 Query: 145 YPEYNFYRMAGMAIDGKDKGEA 166 F RM I GEA Sbjct: 355 VHGMQFERMLDQGITNPQTGEA 376 Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 16/123 (13%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 E C+ C +C CP G I L + E + + C CGLC ACPT A Q Sbjct: 596 NRETCIQCRMCETVCPHGAIRLTE----------EGMVADPAFCQACGLCAAACPTHAAQ 645 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDV 175 L + + L+ + E + P P + G D E P +V Sbjct: 646 L------ANFTDRQLLDQAEVAFSALPEGEPRILALLCYWCSYCGADMAGTERRKAPSNV 699 Query: 176 KSL 178 +S+ Sbjct: 700 RSI 702 >UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Q6_DESAP Length = 126 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 41/116 (35%), Gaps = 9/116 (7%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 I + TR YP E P RGR+ + C C LC CP I Sbjct: 8 IAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFL-----TCGYCGLCERVCPSQAIK--- 59 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + D + CI+CG C E C A+Q+ + ++ L E E Sbjct: 60 -KIGDKKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTLGREGE 114 >UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N627_SLAHD Length = 300 Score = 79.4 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 12/103 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + M F ET +YP RG I D C+ C +C CP Sbjct: 4 FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQD----CILCGICMKKCPAN 59 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 I + K E + I+ RCI C C ACP + + Sbjct: 60 AIVVSKPE--------RTWTIDPFRCIRCNECAIACPKQCLSM 94 >UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6M7_THEAS Length = 301 Score = 79.4 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 16/113 (14%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ- 115 ERCV C CA+ACP G IS Y E R++ SRC+ CG+C +ACP A++ Sbjct: 52 PERCVGCGRCALACPAGAIS-----------YGEHLRLDRSRCVRCGMCAQACPADAMRL 100 Query: 116 ----LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 +TP + + + ++ Y++ ++ G P + K G Sbjct: 101 LGWAMTPRELLAQALKDEIFYDQSGGGVTLSGGEPLSQGEFLLESLELLKSCG 153 Score = 39.3 bits (90), Expect = 0.061, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 56 GEERCVACNLCAVACPVGCISL 77 RCV C +CA ACP + L Sbjct: 79 DRSRCVRCGMCAQACPADAMRL 100 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 79.0 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 19/164 (11%) Query: 14 VRSIWMIGLHAFAKRE-TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++ + + T YP P P RG+ E+C+AC CAVACP Sbjct: 1 MKAMLKTLRNILKTGDATIKYPFAPYDTVPYMRGKP-----EHDLEKCIACAACAVACPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + + + I++ RCIFCG CEE CP AI+LT +FE+ + DL+ Sbjct: 56 NAIQMPTDLSAG----TITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIE 111 Query: 133 EKEDLL--------ISGPGKYPEYNFYRMAGMAIDGKDKGEAEN 168 + L P K +Y R+ D + EA Sbjct: 112 DCTYTLQKCSKCGQYFAPRKEVDYA-VRIMQADKDNPEAQEAAR 154 >UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP Length = 104 Score = 79.0 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 13/110 (11%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 M A +K T YP EP P RG++ C C +CA CP I + Sbjct: 1 MALQWAVSKPVTCRYPFEPRVPVPGSRGQLEF-----DPTACTYCTVCAKKCPTRAIVV- 54 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 + + + I+ CI CG C E+CP ++LT D + Sbjct: 55 -------KRAAKHWTIDRLLCISCGYCVESCPKHCLELTTDHGTPALTKD 97 >UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z1_THESM Length = 152 Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 27/103 (26%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINF 96 PV +P +RG+I ERC+ C LC CP + W PE +I Sbjct: 48 PVPIPEDFRGKIHY-----DPERCIGCRLCITVCPANAME----------WIPELRKIRH 92 Query: 97 --SRCIFCGLCEEACP----------TTAIQLTPDFEMGEYKR 127 SRC+FC LC + CP A+ ++ DF + +Y + Sbjct: 93 YVSRCMFCALCVDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135 >UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE Length = 125 Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 G T +++ L K T YP P RG + + D C C LC+ Sbjct: 2 GLFTFAKTVTATLL---KKPATLNYPARPAKKSDLSRGHLTIDVDS-----CKWCGLCSR 53 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 CP IS+ + + I+ RC+ C C E CP + + + Sbjct: 54 RCPTQAISVD--------RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTY 97 >UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=5 Tax=Euryarchaeota RepID=A5ULB0_METS3 Length = 335 Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 I+ ++ R+T ++ LP R +V+ E++CV C++C+ CP G I Sbjct: 105 CIYCGRCYSVCPRDTILF---KRELPSRED--LVIGEISVDEDKCVYCSICSEMCPAGAI 159 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 SL ++ S+CI+CG+C+ ACP AI+ Sbjct: 160 SLTNNPEFSNDNLNNTIEVDTSKCIYCGVCKRACPQDAIK 199 Score = 66.7 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 ++ C+ C C CP I ++ ++ +C++C +C E CP A Sbjct: 99 EINDDDCIYCGRCYSVCPRDTILFKRELPSREDLVIGEISVDEDKCVYCSICSEMCPAGA 158 Query: 114 IQLTPDFEMG 123 I LT + E Sbjct: 159 ISLTNNPEFS 168 Score = 66.7 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%) Query: 39 YLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC--ISLQKAETKDGRWYPEFF---R 93 + P RG I + CV C LC+VACP +++ + K+ YP + Sbjct: 40 PIVPIARGLIEMDLVSVTSNTCVLCGLCSVACPFDALSLTINGNDIKETGNYPVWEVESE 99 Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 IN CI+CG C CP I + R+DLV + Sbjct: 100 INDDDCIYCGRCYSVCPRDTILFKREL----PSREDLVIGE 136 Score = 58.9 bits (141), Expect = 7e-08, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 51 TRDPDGEERCVACNLCAVACPVGCISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + +RCV C +C CP + L G + + + C+ CGLC AC Sbjct: 12 RKLSHNNDRCVGCGICTDVCPTSSLRLGPIVPIARGLIEMDLVSVTSNTCVLCGLCSVAC 71 Query: 110 PTTAIQLT 117 P A+ LT Sbjct: 72 PFDALSLT 79 Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 10/85 (11%) Query: 34 PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR 93 P + + + + G + L + + AC+ C CP + + + Sbjct: 238 PVDTINVTKPFEGTLKLVETDESTCKGDACHACQDVCPCDAVEIIDNKA----------T 287 Query: 94 INFSRCIFCGLCEEACPTTAIQLTP 118 IN C CG C ACP ++T Sbjct: 288 INLDYCNLCGACVNACPQNIREVTR 312 Score = 43.2 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIF--CGLCEEACPTTAI 114 ++ CV C+ C CPV I++ K + + S C C C++ CP A+ Sbjct: 224 KDGCVNCSWCKEVCPVDTINVTKPF----EGTLKLVETDESTCKGDACHACQDVCPCDAV 279 Query: 115 QLTPD 119 ++ + Sbjct: 280 EIIDN 284 >UniRef50_C1TQG7 Uncharacterized conserved protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQG7_9BACT Length = 372 Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%) Query: 35 EEPVYLPP------------RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 E V LPP R+ ++ R +RC+ C C CP I+++ Sbjct: 275 FERVELPPPDSLRLLPSWMDRFGRELLAARPEQNRKRCILCGRCVEICPADAITMRD--- 331 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 ++ +CI C C E CP AI+L + Sbjct: 332 -------RRLVFDYEKCIRCYCCHEMCPANAIRLKQN 361 Score = 46.2 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 18/33 (54%) Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 N RCI CG C E CP AI + + +Y++ Sbjct: 308 NRKRCILCGRCVEICPADAITMRDRRLVFDYEK 340 >UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA Length = 150 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 13/115 (11%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + I +AF+ T YP P P R + +C+ C LC +CP Sbjct: 1 MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTF-----DGTKCILCGLCQRSCPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CI + K + + ++CI CG C CPT AI + +R Sbjct: 56 ECIIIHKEKEE--------IEYLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRER 102 >UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR Length = 143 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + T MYP+ RGRI + +RC+ C +C CP Sbjct: 3 IFTMTKTVTKNLVTGPATLMYPQRERIFTAITRGRI-----ENAIDRCIFCGMCGRRCPT 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 I + K + ++I+ +C C LC E CP + T + E R+ Sbjct: 58 YAIVVTKE--------SKAWQIDRLKCCTCNLCVEVCPVKCLS-TDNHGKKEIDRE 104 >UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=3 Tax=Deltaproteobacteria RepID=A1AL89_PELPD Length = 435 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E+C C LCA ACP+ I++ A+T+ + + I+ + C+ CG+C CP+ A +L Sbjct: 289 REKCSGCGLCAQACPINAIAMVAADTRSPKRKQDAV-IDTAICLGCGVCALKCPSGACRL 347 Query: 117 TPDFEMGEYKRQDLVYEKE 135 T R+ V E Sbjct: 348 T--------SREQRVITPE 358 Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPG 143 I +C CGLC +ACP AI + ++QD V + + G G Sbjct: 287 ITREKCSGCGLCAQACPINAIAMVAADTRSPKRKQDAVID--TAICLGCG 334 >UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=B8J2C0_DESDA Length = 192 Score = 77.1 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 15/162 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T +P + P R RGR V+ + C+ C +C +C G I Sbjct: 5 LKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVV-----DPDLCMGCGICRHSCAAGAIH 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 + + G I + C C C CPT A+ ++ D+ + + ++ Sbjct: 60 IGQLPDSSGF----TITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQH 115 Query: 137 LLISGPGKYPEYNFYRMAGM------AIDGKDKGEAENEAKP 172 + P + A + + E P Sbjct: 116 TIKYEPCAQCGELMRPIPKALAEKLYAWNDEIDPELTRRLCP 157 >UniRef50_D2BHV2 Hydrogenase, EchF subunit n=5 Tax=Dehalococcoides RepID=D2BHV2_DEHSV Length = 114 Score = 77.1 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 13/104 (12%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 I + + F+ TR YP E RG I RC CN CA CP I+ Sbjct: 5 IGTVLKNLFSTPPTRRYPYEKRESFADSRGNITW-----DAGRCDMCNDCARVCPAHAIT 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 L+ + + +CI+CG C E C AI P + Sbjct: 60 LKPEK--------HIIEYDPLKCIYCGTCTETCLQHAIIQHPLY 95 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 76.7 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 10/102 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP + G +C C C ACP G + L + + + Sbjct: 14 VTLQYP-KKNTKSTYITGIPEFDY-----SKCERCGKCISACPTGALVLVDKDGEREK-- 65 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 +N CIFC CEEAC A++L+ +FE+ + R L Sbjct: 66 --LPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLL 105 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 76.7 bits (187), Expect = 4e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 12/109 (11%) Query: 24 AFAKRETRMY-PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 A K + Y P+ P +RG+ V++ + C C CP + L+ + Sbjct: 6 AVRKSQGTQYIPDLRAATPGGFRGKPVISDAACAD----GCQACVQVCPSRAVRLEPTQ- 60 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 P+ I+ RC+ CG CE CP+ + D ++ R+ L Sbjct: 61 ------PDPVHIDLGRCVLCGDCEPVCPSRKLSFNNDVKLCATSREALT 103 >UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSE2_METMJ Length = 137 Score = 76.3 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 49/148 (33%), Gaps = 13/148 (8%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + TR YP P RG IV C +C+LC CP Sbjct: 3 IFQMTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVF-----DPATCRSCSLCVKRCPC 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I L K + + I+ RCI CG C E CP ++ + + + Y Sbjct: 58 EAIRLDKE--------AKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERY 109 Query: 133 EKEDLLISGPGKYPEYNFYRMAGMAIDG 160 + P K P + G+ Sbjct: 110 TITYVKPERPAKKPAEESTKEEGVGESA 137 >UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 Tax=Methanosarcinaceae RepID=Q46CZ1_METBF Length = 346 Score = 75.5 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGR-WYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E CV C LC CP GCI + + + DG+ I+ C+ CG C CP AI + Sbjct: 107 ESCVHCGLCEDICPQGCIEVTRDISADGKLKLVGKTNIDTECCVHCGWCAAVCPVNAISV 166 Query: 117 TPDFEMGEYKRQDLVYE 133 FE G + R + V + Sbjct: 167 EKPFE-GHWARDEDVCQ 182 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Query: 45 RGRIVLTRDPDGE-ERCVACNLCAVACPVGCISLQKA-----ETKDGRWYPEFFRINFSR 98 RG + E E C+ C +CA ACP G + +++ + + +N S Sbjct: 50 RGLVDADFLEMKEREACLVCGICAKACPTGALEMKQEGKTITDKSYLFRAMKPTSVNES- 108 Query: 99 CIFCGLCEEACPTTAIQLTPD 119 C+ CGLCE+ CP I++T D Sbjct: 109 CVHCGLCEDICPQGCIEVTRD 129 Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 57 EERCVACNLCAVACPVG--CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 E+C+ C C ACP G I A T+ C+ CG+C +ACPT A+ Sbjct: 22 PEKCIGCGTCVQACPKGNLAIGAVGAITRGLVDADFLEMKEREACLVCGICAKACPTGAL 81 Query: 115 QLTPD 119 ++ + Sbjct: 82 EMKQE 86 Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 4/99 (4%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 + E+ C C+ C CP I +KA+ + E CI+CG C Sbjct: 168 KPFEGHWARDEDVCQTCHTCVEVCPANAIFNKKAKPGE---RVEKITHRPDACIYCGACA 224 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKY 145 ACP AI + + + +++ V EK+ L P Sbjct: 225 VACPVDAIDVRKTAILPDMEKKG-VLEKKLLEKPAPETM 262 Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 E CV C CA CPV IS++K + + + C C C E CP AI Sbjct: 145 DTECCVHCGWCAAVCPVNAISVEKP-------FEGHWARDEDVCQTCHTCVEVCPANAI 196 Score = 52.4 bits (124), Expect = 7e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 18/77 (23%) Query: 57 EERCVACNLCAVACPVGCISLQKA---ETKDGRWYPEF---------------FRINFSR 98 + C+ C CAVACPV I ++K + + E + + Sbjct: 214 PDACIYCGACAVACPVDAIDVRKTAILPDMEKKGVLEKKLLEKPAPETMLRTCLETDEAA 273 Query: 99 CIFCGLCEEACPTTAIQ 115 C+ CG C CP A+ Sbjct: 274 CLGCGNCVIVCPVNALS 290 Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 10/76 (13%) Query: 54 PDGEERCVACNLCAVACPVGCISL----------QKAETKDGRWYPEFFRINFSRCIFCG 103 E C+ C C + CPV +S + G I+ RC G Sbjct: 268 ETDEAACLGCGNCVIVCPVNALSDCELAAGHLNNMDEKALLGVKNGRIKVIDQDRCGADG 327 Query: 104 LCEEACPTTAIQLTPD 119 C CP AI+L Sbjct: 328 ACAMICPVDAIRLVKR 343 >UniRef50_B8FNM3 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNM3_DESAA Length = 387 Score = 75.5 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 8/78 (10%) Query: 38 VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFS 97 R+R + + R G+E+C C C CP G IS + G P +++ Sbjct: 306 PITSKRFR-NLFIDRPVPGQEKCTLCYQCMKICPAGAIS----KAGSGGKKP---TYDYN 357 Query: 98 RCIFCGLCEEACPTTAIQ 115 +CI C C E CP AI+ Sbjct: 358 KCIRCYCCMEVCPEAAIE 375 >UniRef50_Q8TYH6 Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing n=1 Tax=Methanopyrus kandleri RepID=Q8TYH6_METKA Length = 150 Score = 75.5 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 12/107 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCAVACPV 72 VR++ + L +R+ + EPV RG L ++ E+RCV C +C CPV Sbjct: 33 VRAVRYLRLRVPVRRDHLLIDGEPVT----ERGVPKLPKNVEVDEDRCVYCGVCMRTCPV 88 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 I + K Y I+ C+ CGLC E CP A++ D Sbjct: 89 DAIQVTKP-------YQGHIEIDDEECVGCGLCVEICPCNALEFGRD 128 Score = 49.3 bits (116), Expect = 6e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%) Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 I + + P+ ++ RC++CG+C CP AIQ+T + Sbjct: 52 IDGEPVTERGVPKLPKNVEVDEDRCVYCGVCMRTCPVDAIQVTKPY 97 >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 75.1 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP P+ + P +RG+ L A ACP +++Q + ++ R Sbjct: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGAC-----ACACPANALTIQTDDQQNSR-- 66 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 +++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 67 --TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 >UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD Length = 458 Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 36/75 (48%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINF 96 + + G + L+++ E C++C C ACP+ + + A+ + Y + + N Sbjct: 362 RIPVIKGTSGILFLSKEEIERESCISCGYCVEACPMNLMPFEFADYYEKGKYEKMIKANI 421 Query: 97 SRCIFCGLCEEACPT 111 CI CG CE CP+ Sbjct: 422 QNCIECGACEFVCPS 436 >UniRef50_B1L5Y3 Heterodisulfide reductase, subunit A n=2 Tax=cellular organisms RepID=B1L5Y3_KORCO Length = 656 Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 E +C C +C CP IS+QK E DG Y + I+ C CG C ACP+ A Sbjct: 581 EVDESKCSGCGICVSICPFNAISMQKRE--DGTRYSK---IDPLLCEGCGTCVAACPSAA 635 Query: 114 IQ 115 IQ Sbjct: 636 IQ 637 Score = 71.7 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW--------YPEFFRINFSRCI 100 V+ + ERC C C CPV + K + YPE + I+ + C Sbjct: 243 VMRKPRYVNERCNLCGKCEEVCPVSVPDEYEYGIKKRKAIYLPYSGAYPERYVIDPNSCT 302 Query: 101 FCGLCEEACPTTAIQLTP 118 FCG C E CP AI L Sbjct: 303 FCGKCVEVCPVNAIDLNE 320 Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGK 144 P ++ S+C CG+C CP AI + + Y + D LL G G Sbjct: 577 PLIAEVDESKCSGCGICVSICPFNAISMQKREDGTRYSKIDP------LLCEGCGT 626 Score = 40.8 bits (94), Expect = 0.022, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 12/32 (37%) Query: 52 RDPDGEERCVACNLCAVACPVGCISLQKAETK 83 R C C C CPV I L + E + Sbjct: 293 RYVIDPNSCTFCGKCVEVCPVNAIDLNEKEGE 324 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLC 105 G L D E C C +CP I+L E ++ ++++RC+ C LC Sbjct: 32 GLPKLNADQCSEGA-QGCTKCVTSCPSEAITLNVTEDQEP-----HIDLDYARCVGCQLC 85 Query: 106 EEACPTTAIQLTPDFEMGEYKRQDL 130 E CP+ A + D+ R DL Sbjct: 86 TETCPSGAFSPSNDWAFAVRDRADL 110 >UniRef50_Q1PYR5 Similar to NAD(P) oxidoreductase, FAD-containing subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYR5_9BACT Length = 566 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAET-------KDGRWYPEFFR----INFSRCIFCGLC 105 +E+C+ C C CP CIS+ E ++ PE + I+ +CI CGLC Sbjct: 488 DEKCILCGGCIDVCPYNCISMVSRENISLPDSLRNEENIPEEWDAAMIIDEEKCIRCGLC 547 Query: 106 EEACPTTAIQLTP 118 + CPT AI + Sbjct: 548 VKRCPTRAITMKR 560 Score = 46.2 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 35 EEPVYLPPRYRGRIVLTRDPD-----GEERCVACNLCAVACPVGCISLQKAETKDG 85 E + LP R + + D EE+C+ C LC CP I++++ +G Sbjct: 511 RENISLPDSLRNEENIPEEWDAAMIIDEEKCIRCGLCVKRCPTRAITMKRFAYSEG 566 >UniRef50_B8FJB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJB4_DESAA Length = 390 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 52 RDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 R ++CV C C CP I ++K + +I+ +CI CGLC AC Sbjct: 293 RAALDSDKCVLCGKCEKRCPTQAIKIKK----------DAVKIDLGKCIGCGLCAAACKP 342 Query: 112 TAIQLTP 118 A+ + P Sbjct: 343 GALTMAP 349 Score = 42.8 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 18/26 (69%) Query: 94 INFSRCIFCGLCEEACPTTAIQLTPD 119 ++ +C+ CG CE+ CPT AI++ D Sbjct: 296 LDSDKCVLCGKCEKRCPTQAIKIKKD 321 Score = 39.3 bits (90), Expect = 0.066, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD 84 +I +C+ C LCA AC G +++ ++ Sbjct: 317 KIKKDAVKIDLGKCIGCGLCAAACKPGALTMAPKTKQE 354 >UniRef50_Q6LJL0 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q6LJL0_PHOPR Length = 210 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLP---------PRYRGRIVLTRDPDGEERC 60 +S+W+ + A RM E L + R L D ++ C Sbjct: 12 LYRIFKSLWLTAIAAVPYGIGRMLMPEKNQLASLNKSQLNHDKLRPPGALNDDIAFQKAC 71 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 + C+LCA CP CI + + P + CI CG C E CPT A+ +T Sbjct: 72 IGCSLCAEVCPPACIQFYHLDGANNANTP-YIEPALRACILCGKCMEVCPTNALTVTE 128 Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 10/51 (19%) Query: 63 CNLCAVACPVG--CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 C C CP+G IS + A +N C+ CGLC E CP Sbjct: 153 CGACVSICPLGETAISFEFAN-------MYRPVVNDG-CVGCGLCVEVCPH 195 Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 10/64 (15%) Query: 60 CVACNLCAVACPVGCISLQKAETKD-----GRWYPEFFRINFSRCIFCGLCEEACPTT-- 112 C+ C C CP +++ + + + ++ CG C CP Sbjct: 109 CILCGKCMEVCPTNALTVTETRKVNMGRAQIERLACYPWVDRG---ICGACVSICPLGET 165 Query: 113 AIQL 116 AI Sbjct: 166 AISF 169 >UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria RepID=B2TM76_CLOBB Length = 646 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%) Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 +C+ C C ACPV CI DG + I++++C CG C ACP AI Sbjct: 223 KCIGCGSCKRACPVDCI--------DGELKKQH-NIDYNKCTHCGACISACPVDAITAGN 273 Query: 119 D 119 + Sbjct: 274 N 274 >UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI Length = 105 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 13/99 (13%) Query: 20 IGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQK 79 + + K+ TR YP P RG + E+C+ C CA CP CIS+ K Sbjct: 10 VVKNLINKKSTRPYPFVVREPFPDQRGELY-----CDIEQCIFCGTCARKCPSQCISVDK 64 Query: 80 AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 + ++ + C++CG CEE CPT + Sbjct: 65 EQG--------IWKCDPFACVYCGTCEEVCPTHCLHHKG 95 >UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Methanobacteriaceae RepID=A5UJY8_METS3 Length = 347 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 14/107 (13%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV-GCISLQKAETKDGRWYPEFFRI 94 E V P R+R + + E C+ C C +CP I L + E + + + I Sbjct: 28 EIVEKPSRFRNFPNVIK-----EYCIGCGACISSCPSPNAIKLVRDEDDETKEGVTYPII 82 Query: 95 NFSRCIFCGLCEEACPTTAIQ--------LTPDFEMGEYKRQDLVYE 133 N S CI CG C E CPT L P+F + KRQ ++ + Sbjct: 83 NKSACIRCGFCAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFIIDD 129 Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 9/73 (12%) Query: 40 LPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRC 99 L P + + + C+ C C CPVG I ++ +N +C Sbjct: 112 LKPEFNIIPSKRQFIIDDYLCIRCKKCMKQCPVGAIHVEDD---------GKVVVNPFKC 162 Query: 100 IFCGLCEEACPTT 112 I CG C + CP Sbjct: 163 ISCGECLDVCPVN 175 Score = 48.2 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 8/69 (11%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R+ + E C C +C CP IS + R N ++C+ C +C Sbjct: 253 RLKIRIIDWDSETCKKCQMCIPDCPTKAISFDEKNDTIVR--------NENKCLRCSICY 304 Query: 107 EACPTTAIQ 115 ++CP + I+ Sbjct: 305 QSCPFSTIK 313 >UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T2_UNCMA Length = 221 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 19/152 (12%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + F K T +L YR +E+C C C C G K Sbjct: 15 NLFKKPVTVDVDYG--FLAETYRAMPR-----RDDEKCTGCGACFERCSSGA---TKITD 64 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 KDG+ ++ + CIFCG C +ACP A+ LT + + E K +E+ L + Sbjct: 65 KDGQRT---VTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAA-----REEALRNA- 115 Query: 143 GKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 GK + AGM A +P Sbjct: 116 GKADDVRAQVEAGMPGSMDRVNLAHYGGEPAP 147 >UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Leptotrichia RepID=C9N0M8_9FUSO Length = 464 Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 34/75 (45%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINF 96 V + G + L+ + C++C C ACP+ + + A+ + Y + + N Sbjct: 368 RVPVIKGTSGILFLSTEEIERNNCISCGYCVEACPMNLMPFEFADYYEKGKYEKMVKANI 427 Query: 97 SRCIFCGLCEEACPT 111 CI CG CE CP+ Sbjct: 428 QNCIECGACEFVCPS 442 >UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFW9_9FIRM Length = 285 Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLC 105 G I + + + C++C LCA CP G I+++ + I+ +CI CG C Sbjct: 151 GFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDG----------YPAIDREKCIHCGEC 200 Query: 106 EEACPTTA 113 CPT A Sbjct: 201 VAVCPTEA 208 Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 + C +C + E G + + CI CGLC + CP+ AI + + Sbjct: 133 IGVTGCPRSCA------KPQENDFGFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDGY 186 Query: 121 EMGEYKRQDLVY 132 R+ ++ Sbjct: 187 --PAIDREKCIH 196 >UniRef50_Q8TYJ0 Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing n=1 Tax=Methanopyrus kandleri RepID=Q8TYJ0_METKA Length = 357 Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF-FRINFSRCIFCGL 104 G +V+ EE+C+ C C ACP I++++ + PEF ++ +C++CG+ Sbjct: 142 GDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGV 201 Query: 105 CEEACPTTAIQLTPDFEMGEYKRQ 128 C CP AI++ G + + Sbjct: 202 CMRTCPVDAIKVGCMVCYGTTRGE 225 Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 EE CV C+LCA CP I++++ G I+ +CI+C CEEACP A Sbjct: 111 EVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADA 170 Query: 114 IQLTPDFEMGEYKRQDLVYEKED 136 I + + E ++ Sbjct: 171 ITVERPKPSAADPEPEFTIEVDE 193 Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 54 PDGEERCVACNLCAVACPVGCISL--------QKAETKDGRWYPEFFRINFSRCIFCGLC 105 E++CV C +C CPV I + + E ++ S C++CG C Sbjct: 190 EVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDPSSCVYCGWC 249 Query: 106 EEACPTTAIQLTPDFE 121 CP AI++ +E Sbjct: 250 GFVCPVDAIEVIKPYE 265 Score = 62.8 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 +E CV C LC CP G + +K + C +CG C ACP A Sbjct: 269 EVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVA----HPETCAYCGACARACPVNA 324 Query: 114 IQLTPD 119 I + + Sbjct: 325 ITVVRE 330 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 56 GEERCVACNLCAVACPVGCISL----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 E +CV C +CA CP I L + P+ ++ C++C LC + CP Sbjct: 70 DESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQ 129 Query: 112 TAIQLTPD 119 AI + + Sbjct: 130 EAITVERE 137 Score = 61.3 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 +C AC +C ACPVG IS+ + R + ++ S+C+ CG+C CP IQ Sbjct: 32 NTSKCAACGICEAACPVGAISV-APPSAVVRKGEDPIDVDESKCVLCGICAFVCPYDVIQ 90 Query: 116 L 116 L Sbjct: 91 L 91 Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 CV C C CPV I + K Y ++ C+ CGLC E CP A++ Sbjct: 239 DPSSCVYCGWCGFVCPVDAIEVIKP-------YEGTLEVDDEECVGCGLCVEVCPCGALE 291 Query: 116 LTPDFEMGEYK 126 + G+ K Sbjct: 292 FEKGGKAGKTK 302 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 73.2 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%) Query: 35 EEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRI 94 + P+ P GRI + D C C C C V +S++K + I Sbjct: 16 KNPLTDNPYSYGRIEVCND-----NCTGCGKCVQECLVDAVSIKKDT------KHKSIDI 64 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 +F +CI+C C +ACP+ ++ + D++M Sbjct: 65 DFKKCIYCNNCVDACPSKVLKSSNDYKMAS 94 >UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYA9_SYNAS Length = 637 Score = 73.2 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEA 108 L + +E+C C CA CPV IS ++ + + I+ ++CI CG+C E Sbjct: 578 ALIQYNIDKEKCTGCMACAKKCPVEAISGERKKAHE---------IDQAKCIKCGVCMET 628 Query: 109 CPTTAIQLT 117 C AI L+ Sbjct: 629 CKFDAITLS 637 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 15/103 (14%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV-ACNLCAVACPVGCISLQKAETKDGRW 87 T +P +P P G + + R G RC C +CA +CP G I L A Sbjct: 14 ATTSWPLKPG--PDGQDGVVGMPRLDPG--RCEAGCEVCAASCPTGAIGLAGA------- 62 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 +++ RC+ C C E CPT A+ + D+ G R DL Sbjct: 63 ---RIALDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDL 102 >UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMN2_9FIRM Length = 803 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 D +++C C+ CA+ACP CI++ K+G YP +I+ CI C C++ CP Sbjct: 416 DSKDKCCGCSACAMACPKQCITMVA--DKEGFLYP---QIDQELCIHCNKCQQVCPV 467 >UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon RepID=D1JH36_9ARCH Length = 678 Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 14/113 (12%) Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL-- 116 +C+ CN C CP ++ K + + RCI CGLCE+ACP AI L Sbjct: 540 KCLICNACETLCPTKALTKDKNK----------INFVYGRCIACGLCEQACPEEAITLER 589 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGK--YPEYNFYRMAGMAIDGKDKGEAE 167 T DF K + E E + +G GK + F R++ + +GE + Sbjct: 590 TLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISKALRESGGRGEVK 642 Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 12/61 (19%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 +C++C LCA ACP I Y + I C CG C CPT AI+ Sbjct: 197 DLAKCISCGLCAGACPKEAIQ-----------YDAVYTIGAG-CDDCGDCVSVCPTGAIE 244 Query: 116 L 116 L Sbjct: 245 L 245 Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 I+ ++CI CGLC ACP AIQ + +G Sbjct: 195 NIDLAKCISCGLCAGACPKEAIQYDAVYTIGA 226 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 54/166 (32%), Gaps = 34/166 (20%) Query: 4 KELLVGFGTQVRSIWMIGLH----AFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEER 59 + LL G Q R +W FA +EP P RGR+ + Sbjct: 126 QALLAGIA-QARDLWRARSKGVDAVFAAPPLAKPADEPAQQFP-IRGRMSF-----DPKA 178 Query: 60 CVACNLCAVACPVGCISLQKAETKD-----------------------GRWYPEFFRINF 96 CV C +C C G I K G + Sbjct: 179 CVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKEDRHLRSLSPGSPEGVRLTLWH 238 Query: 97 SRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 + C+FCGLC CPT A+ +T D+ + Q + ++ + P Sbjct: 239 NSCVFCGLCSHYCPTGALSVTGDWHLAHRGGQTFRFSEQGEVPYTP 284 >UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZP8_9BACE Length = 387 Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 10/70 (14%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R L+ P E CV C +CA +CPV I+++ RI+ +CI C C Sbjct: 317 RRALSATPRVREACVGCGICAASCPVKAITVKNRRA----------RIDTGKCIRCYCCH 366 Query: 107 EACPTTAIQL 116 E CP A++L Sbjct: 367 ELCPHKAVEL 376 >UniRef50_UPI0001BC56BC hydrogenase, Fe-only n=3 Tax=Fusobacterium RepID=UPI0001BC56BC Length = 652 Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 9/57 (15%) Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 E+C+ C CA CPV CI+ G F ++ SRC CG C ACP AI Sbjct: 223 EKCIGCTACARVCPVKCIA--------GAPKKRHF-LDTSRCTHCGQCVSACPVGAI 270 Score = 38.9 bits (89), Expect = 0.069, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 10/20 (50%) Query: 56 GEERCVACNLCAVACPVGCI 75 RC C C ACPVG I Sbjct: 251 DTSRCTHCGQCVSACPVGAI 270 >UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS Length = 196 Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 13/106 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +++ + L+ F K T E + +R D C C C C G Sbjct: 7 LKAFGDLALNFFRKPVTVD--ESYGFTAENFRWLPRRNADL-----CTGCGACNERCSSG 59 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 SL A+ + I+ RCIFCG C + CP A++LT + Sbjct: 60 ATSLTDADGE------RTVSIDGLRCIFCGRCADVCPERALELTLE 99 >UniRef50_Q3A9J0 Iron-sulfur cluster-binding protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9J0_CARHZ Length = 372 Score = 72.0 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 10/80 (12%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 T P ERCV C CA CP + ++ +++++CI C C+E C Sbjct: 303 FTARPVMNERCVGCGRCARHCPPKAVKIENRRA----------IVDYNKCIRCYCCQELC 352 Query: 110 PTTAIQLTPDFEMGEYKRQD 129 P A++L F M + R+ Sbjct: 353 PANAVELKEGFLMRLFSRKK 372 >UniRef50_Q8TVA8 Archaea-specific flavoprotein n=1 Tax=Methanopyrus kandleri RepID=Q8TVA8_METKA Length = 246 Score = 72.0 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 10/66 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 ERC C +C ACP I + + I RC+ CG C EACP AI Sbjct: 147 RERCEGCGICVDACPRSAIDMVDGKAF----------IRLLRCVGCGKCAEACPEDAIHG 196 Query: 117 TPDFEM 122 ++EM Sbjct: 197 GLEYEM 202 Score = 39.7 bits (91), Expect = 0.043, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 77 LQKAETKDGR-WYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 + + ++G+ + + RC CG+C +ACP +AI + Sbjct: 127 VVPCDYEEGKIRTITPYMVLRERCEGCGICVDACPRSAIDMVD 169 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 212 4e-54 UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 210 2e-53 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 195 6e-49 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 178 6e-44 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 173 2e-42 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 168 8e-41 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 165 7e-40 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 163 2e-39 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 160 1e-38 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 159 3e-38 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 159 5e-38 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 157 2e-37 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 157 2e-37 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 156 3e-37 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 156 4e-37 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 155 5e-37 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 155 5e-37 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 155 6e-37 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 154 1e-36 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 154 2e-36 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 153 3e-36 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 150 2e-35 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 149 4e-35 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 149 5e-35 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 148 7e-35 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 146 2e-34 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 146 3e-34 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 146 3e-34 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 145 7e-34 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 144 1e-33 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 144 1e-33 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 142 5e-33 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 142 5e-33 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 142 6e-33 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 142 8e-33 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 141 1e-32 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 140 2e-32 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 140 2e-32 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 140 2e-32 UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 138 6e-32 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 138 6e-32 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 138 1e-31 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 137 1e-31 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 137 1e-31 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 137 2e-31 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 137 2e-31 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 137 2e-31 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 135 1e-30 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 135 1e-30 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 134 1e-30 UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro... 134 1e-30 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 133 2e-30 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 133 2e-30 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 133 3e-30 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 133 3e-30 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 132 4e-30 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 132 5e-30 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 132 6e-30 UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c... 132 8e-30 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 131 8e-30 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 131 9e-30 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 130 2e-29 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 130 2e-29 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 129 3e-29 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 128 6e-29 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 128 7e-29 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 126 3e-28 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 125 5e-28 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 125 6e-28 UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 125 8e-28 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 125 1e-27 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 124 2e-27 UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 123 2e-27 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 123 2e-27 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 123 2e-27 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 122 5e-27 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 122 6e-27 UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 122 6e-27 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 121 1e-26 UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 120 2e-26 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 120 2e-26 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 120 2e-26 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 120 2e-26 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 119 4e-26 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 119 5e-26 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 119 5e-26 UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip... 118 6e-26 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 118 7e-26 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 117 1e-25 UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryot... 117 2e-25 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 117 2e-25 UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain pro... 117 3e-25 UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatu... 117 3e-25 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 117 3e-25 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 116 3e-25 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 116 4e-25 UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax... 115 5e-25 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 115 6e-25 UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria... 115 6e-25 UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp... 115 7e-25 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 114 1e-24 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 114 1e-24 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 114 2e-24 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 114 2e-24 UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic... 113 2e-24 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 113 3e-24 UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdeh... 113 3e-24 UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca... 113 4e-24 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 112 4e-24 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 112 5e-24 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 112 7e-24 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 111 9e-24 UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro... 110 2e-23 UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE... 109 3e-23 UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u... 109 4e-23 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 109 4e-23 UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 108 6e-23 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 108 6e-23 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 108 8e-23 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 108 8e-23 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 108 1e-22 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 108 1e-22 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 108 1e-22 UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro... 107 1e-22 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 107 2e-22 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 107 2e-22 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 107 2e-22 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 107 3e-22 UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 106 3e-22 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 106 3e-22 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 106 4e-22 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 106 4e-22 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 106 4e-22 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 105 5e-22 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 105 6e-22 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 105 7e-22 UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C... 104 1e-21 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 104 1e-21 UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi... 104 2e-21 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 104 2e-21 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 103 2e-21 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 103 2e-21 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 3e-21 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 102 8e-21 UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 1e-20 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 101 1e-20 UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 1e-20 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 100 2e-20 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 4e-20 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 99 7e-20 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 99 7e-20 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 99 8e-20 UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibri... 99 9e-20 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 98 1e-19 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 98 1e-19 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 97 2e-19 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 97 3e-19 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 96 4e-19 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 96 5e-19 UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 8e-19 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 95 9e-19 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 95 1e-18 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 95 1e-18 UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc... 95 1e-18 UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 1e-18 UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep... 95 1e-18 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 93 3e-18 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 93 4e-18 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 93 5e-18 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 93 5e-18 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 90 3e-17 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 90 3e-17 UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus... 90 3e-17 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 90 3e-17 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 90 3e-17 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 89 5e-17 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 89 8e-17 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 88 1e-16 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 88 2e-16 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 87 2e-16 UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 87 3e-16 UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins... 86 5e-16 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 86 7e-16 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 85 7e-16 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 85 7e-16 UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon... 85 7e-16 UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot... 85 9e-16 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 85 1e-15 UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=... 85 1e-15 UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 85 1e-15 UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins... 85 1e-15 UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran... 85 1e-15 UniRef50_D2BHV2 Hydrogenase, EchF subunit n=5 Tax=Dehalococcoide... 85 1e-15 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 84 2e-15 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 84 2e-15 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 84 2e-15 UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 2e-15 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 2e-15 UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 2e-15 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 84 3e-15 UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 84 3e-15 UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax... 83 3e-15 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 83 4e-15 UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 83 4e-15 UniRef50_A1RRC0 Pyruvate/ketoisovalerate oxidoreductase, gamma s... 83 5e-15 UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 83 5e-15 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 83 5e-15 UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 83 5e-15 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 83 5e-15 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 82 8e-15 UniRef50_A6GD17 Carbamoyltransferase n=1 Tax=Plesiocystis pacifi... 82 9e-15 UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain pro... 82 1e-14 UniRef50_A0LGG6 Response regulator receiver modulated FAD-depend... 81 1e-14 UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota... 80 2e-14 UniRef50_B8FNM3 Putative uncharacterized protein n=1 Tax=Desulfa... 80 3e-14 UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone... 80 3e-14 UniRef50_C1TQG7 Uncharacterized conserved protein n=1 Tax=Dethio... 80 3e-14 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 80 4e-14 UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subun... 79 5e-14 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 79 6e-14 UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI 78 1e-13 UniRef50_Q1PYR5 Similar to NAD(P) oxidoreductase, FAD-containing... 77 2e-13 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 77 2e-13 UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n... 77 2e-13 UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth... 77 2e-13 UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding sub... 77 2e-13 UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ... 77 2e-13 UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family ... 77 3e-13 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 77 3e-13 UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q... 77 3e-13 UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desu... 77 3e-13 UniRef50_B0VI75 Putative [Fe] hydrogenase (Fe-only hydrogenase) ... 77 3e-13 UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte... 77 4e-13 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 76 4e-13 UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=... 76 4e-13 UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 76 6e-13 UniRef50_C0QEM8 HdrA4 n=5 Tax=Bacteria RepID=C0QEM8_DESAH 76 6e-13 UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1... 76 6e-13 UniRef50_B1I324 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 76 7e-13 UniRef50_C7HSM1 Periplasmic [Fe] hydrogenase 1 n=3 Tax=Clostridi... 76 7e-13 UniRef50_B8FJB4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 75 7e-13 UniRef50_B8DNV0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 75 8e-13 UniRef50_D2XBH6 Putative naphthyl-2-methyl-succinate synthase ac... 75 9e-13 UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subun... 75 9e-13 UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Meth... 75 9e-13 UniRef50_Q8TYP4 CoB--CoM heterodisulfide reductase iron-sulfur s... 75 9e-13 UniRef50_B8D101 Hydrogenase large subunit domain protein n=6 Tax... 75 9e-13 UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 75 9e-13 UniRef50_D0L6B6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 75 1e-12 UniRef50_B8F9A8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 75 1e-12 Sequences not found previously or not previously below threshold: >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 212 bits (540), Expect = 4e-54, Method: Composition-based stats. Identities = 147/179 (82%), Positives = 163/179 (91%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 + +++ G GTQ+RS+ M+ H F KR+T YPEEPVYLPPRYRGRIVLTRDPDGEERCV Sbjct: 4 YIGDIVKGTGTQLRSLVMVFGHGFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACNLCAVACPVGCISLQKAET+DGRWYP+FFRINFSRCIFCGLCEEACPTTAIQLTPDFE Sbjct: 64 ACNLCAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 123 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 M E+KRQDLVYEKEDLLISGPGK P+YNFYR+AGMAI GK KG A+NEA+PI+VKSLLP Sbjct: 124 MAEFKRQDLVYEKEDLLISGPGKNPDYNFYRVAGMAIAGKPKGSAQNEAEPINVKSLLP 182 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 210 bits (534), Expect = 2e-53, Method: Composition-based stats. Identities = 161/180 (89%), Positives = 169/180 (93%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MTLKEL +G GT +RSIWMIG+ AF KRETRMYP+ PV PPR+RGRIVLTRDPDG+ERC Sbjct: 1 MTLKELAIGCGTTLRSIWMIGMQAFNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERC 60 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 VACNLCAVACPV CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF Sbjct: 61 VACNLCAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 EMGE+KRQDLVYEK+DLLISGPGKYPEYNFYRMAGMAI GKDKGEAENEAKPIDVK LLP Sbjct: 121 EMGEFKRQDLVYEKDDLLISGPGKYPEYNFYRMAGMAIAGKDKGEAENEAKPIDVKGLLP 180 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 195 bits (496), Expect = 6e-49, Method: Composition-based stats. Identities = 136/179 (75%), Positives = 158/179 (88%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 T+K+ ++G T VRS+WM+ HA R+T +YPE PV +PPR+RGRI+L+RDPDG+ERCV Sbjct: 4 TIKKTVIGLFTIVRSMWMVNSHALRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 ACNLCAVACPVGCISLQKAE +DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ+TPDFE Sbjct: 64 ACNLCAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFE 123 Query: 122 MGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 MGEY RQDLVYEKE LLISGPGKYP+YN+YR+ GMA+ K KG A+NEA PID++SLLP Sbjct: 124 MGEYVRQDLVYEKEHLLISGPGKYPDYNYYRVTGMAVADKPKGAAQNEAAPIDLRSLLP 182 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 178 bits (452), Expect = 6e-44, Method: Composition-based stats. Identities = 94/175 (53%), Positives = 118/175 (67%), Gaps = 1/175 (0%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 ++ F +++ H F + T YPE PRYR RIVLTRDP+G ERCVAC L Sbjct: 11 IITDFKAIATGLFVTWKHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYL 70 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 C+ ACPV CIS++ E +GR Y +FRINFSRCIFCGLC EACPT AIQ+TPD+E+ E Sbjct: 71 CSAACPVDCISMEATEDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICER 130 Query: 126 KRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 +LVYEKEDLLI G GK P YNFYR AG+ + + +G E E +P+D + L+P Sbjct: 131 DIMELVYEKEDLLIDGCGKDPAYNFYRHAGIGVT-QPRGAGEREEEPVDARGLMP 184 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 73/145 (50%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 +R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 65 ELIRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICP 124 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+ Sbjct: 125 AQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELL 184 Query: 132 YEKEDLLISGPGKYPEYNFYRMAGM 156 Y KE LL +G E A Sbjct: 185 YNKEKLLNNGDKWEAEIAANIQADY 209 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 168 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 72/145 (49%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 R + M + F + T YP E L PR+RG L R P GEERC+AC LC CP Sbjct: 63 ELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICP 122 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I+++ DG + I+ ++CI+CG C+EACP AI P+FE ++L+ Sbjct: 123 AQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELL 182 Query: 132 YEKEDLLISGPGKYPEYNFYRMAGM 156 Y KE LL +G E A Sbjct: 183 YNKEKLLNNGDKWEAEIAANIQADY 207 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 73/141 (51%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 R +++ F T YP E + PR+RG L R P GEERC+AC LC Sbjct: 97 LSEIARGMYICLEMYFRAPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAI 156 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ E DG + I+ ++CI+CG C+E+CP AI TP+ E R++ Sbjct: 157 CPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREE 216 Query: 130 LVYEKEDLLISGPGKYPEYNF 150 L+Y KE LL +G E + Sbjct: 217 LLYNKEKLLENGDKWEQELQY 237 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 8/175 (4%) Query: 1 MTLKELLVG--FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 MTLK LL F ++ + + H F K+ T YP E + L YRG IV R +G+E Sbjct: 1 MTLKSLLKSVLFTEIMQGLKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQE 60 Query: 59 RCVACNLCAVACPVGCISLQK--AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 RCV C+LC CP I + R + + + ++F+RCIFCG C ACP A+ + Sbjct: 61 RCVGCDLCEAICPAKAIRVVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSM 120 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFY----RMAGMAIDGKDKGEAE 167 T +F + R+ L+Y K+ LL G E Y M G GKD+G Sbjct: 121 TKEFAHSSFTREGLIYSKDQLLALGDRCESESIAYLKVRNMWGAEDSGKDEGRYH 175 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 74/150 (49%), Gaps = 12/150 (8%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 K L V + F T YP E V P RY GR L R DG E+C+ C Sbjct: 11 KGPLGKLLAPVAGFGVTLGSMFRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGC 70 Query: 64 NLCAVACPVGCISLQKAETKD------------GRWYPEFFRINFSRCIFCGLCEEACPT 111 LCA ACP I ++ A+ D G Y ++IN+ RCIFCGLC EACPT Sbjct: 71 ELCAWACPADAIYVEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPT 130 Query: 112 TAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 A+ ++ D+E+ R ++YEK+DLL Sbjct: 131 RALTMSNDYELAGPTRAGMIYEKQDLLAPP 160 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 81/150 (54%), Positives = 96/150 (64%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 + + W T YPEE LPPR+RGR VLTRDPDG+ERCVAC LC+ Sbjct: 5 LRSWIVGFWTTLRQLGRWPVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAV 64 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP CI L+ + DGR Y FRINFSRCI+CGLCEEACPT AIQL +F G+ +R D Sbjct: 65 CPTQCIELEGDDRPDGRRYARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRAD 124 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 VY K LLI GPGK+P Y +Y AG+ I+ Sbjct: 125 FVYHKAALLIDGPGKHPHYRYYDHAGVRIE 154 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 74/139 (53%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 + L+ R +++ + F + T YP E L R+RG L + +GEERC+A Sbjct: 13 ITNLIRSALLNCRGMYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIA 72 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C LC CP I+++ E DG + I+ ++CI+CG C+EACP AI P+FE Sbjct: 73 CKLCEAICPAQAITIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEY 132 Query: 123 GEYKRQDLVYEKEDLLISG 141 R++L+Y K LL +G Sbjct: 133 ATETREELMYNKSKLLHNG 151 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 6/131 (4%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + + F T +P E V PRY GR L R PDG E+C+ C LCA ACP I Sbjct: 60 GFGVTFRNFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAI 119 Query: 76 SLQKAETK------DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 ++ A G Y ++IN+ RCIFCG+C EACPT A+ ++ D+E+ + R+D Sbjct: 120 YVEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNRED 179 Query: 130 LVYEKEDLLIS 140 L+YEK++LL+ Sbjct: 180 LIYEKDELLVP 190 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 157 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 5/165 (3%) Query: 11 GTQVRSIWMIGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCA 67 G +W++ + F + T YP E +PPRYRG L R G ERC+ C LC Sbjct: 30 GELFVGLWVVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCE 89 Query: 68 VACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 C CI+++ + DGR + + IN RC++CGLC + CP AI ++E+ +R Sbjct: 90 KICVANCIAMETSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQR 149 Query: 128 QDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 + KEDLLI G AG ++ G A + P Sbjct: 150 AYYGF-KEDLLIRGENLCLNGAAQEFAGYGSLDENAG-ARIKVTP 192 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 64/170 (37%), Positives = 87/170 (51%), Gaps = 7/170 (4%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 GF V + F KR T YPE+P PR+ GR L R PDG E+CV C LCA Sbjct: 40 GFQNPVAGFGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAW 99 Query: 69 ACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 ACP I ++ A+ + G Y ++IN++RCI CGLC EACPT A+ +T +FE+ Sbjct: 100 ACPADAIYVEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFEL 159 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 + R++L+Y K+ LL + GM +G EA P Sbjct: 160 ADSTRENLIYTKDQLLAGLTEGMVDSPHAIFPGMDEGDYYRGLVT-EAAP 208 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 1/137 (0%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCAVAC 70 + + + H F K T+ YP+E + +RGR L RD G RCVAC CA C Sbjct: 19 EIAQGLALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVC 78 Query: 71 PVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 P CI ++ + DG + + I+ RCI+CG C E CP AI LT + RQ+ Sbjct: 79 PSHCIRIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEF 138 Query: 131 VYEKEDLLISGPGKYPE 147 V+++ LL + E Sbjct: 139 VFDEAHLLRNWDEFAAE 155 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 6/151 (3%) Query: 6 LLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 +L G + + + F K T YPE + R+RGR L R +G ERC+ C+L Sbjct: 1 MLKGTMAYFKGLKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSL 60 Query: 66 CAVACPVGCISLQKA------ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 CA ACP I + G + + IN RCIFCG CE+ACPT AI L Sbjct: 61 CAAACPADAIYVVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQ 120 Query: 120 FEMGEYKRQDLVYEKEDLLISGPGKYPEYNF 150 +E+ Y R+ +Y ++ LL++ + E Sbjct: 121 YELAFYDRRASIYTQDMLLVAVDKGHGEVPP 151 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 84/157 (53%), Gaps = 6/157 (3%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 ++ + T ++ + ++ HAF T YPEE LP R RGR LT+ DG ERCV Sbjct: 1 MRTTIHKVITMMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVG 60 Query: 63 CNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C LCA+ CP I ++ A + G Y F+IN RCIFCG CEEACPT AI L Sbjct: 61 CELCAIVCPAQAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVL 120 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRM 153 + +E+ Y R+D++Y K+ L PG+ + Sbjct: 121 SNQYELSAYTREDMIYTKDRLTEKTPGESGRDPSREI 157 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 155 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDP-DGEERCVACNLCAV 68 + + + F+K T YP E + +RGR L RDP +++C+ C C Sbjct: 12 LIEIFKGLLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTT 71 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP CI +++ +T+ + + I+ SRCIFC C EACP A+ LT DFE Y R Sbjct: 72 VCPSRCIYIKREKTE-NKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRN 130 Query: 129 DLVYEKEDLLISGPGKYPE-----YNFYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 +L++ KE LL + + Y ID + + E KPI +K ++ Sbjct: 131 NLIFNKEQLLKNWDEFASKWTRDVYFNKFWQPPGIDPSRWPKTKREQKPIPIKRVI 186 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 2/150 (1%) Query: 1 MTLKELLVGF--GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE 58 +LK+ L F + + + G +AF + T YPEE L PR+RG L R +GEE Sbjct: 17 FSLKDFLSSFMLSELFKGLALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEE 76 Query: 59 RCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 RC+AC LC CP I+++ DG + I+ ++CIFCG CEE+CP +I T Sbjct: 77 RCIACKLCEAICPAMAITIESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETS 136 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPEY 148 E R DL + K+ LL G P+ Sbjct: 137 ILEYHGESRSDLYFTKDMLLAVGDRYEPQI 166 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 154 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 97/177 (54%), Gaps = 21/177 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 +S+ + + F+K T YP+ PV L PR+ GR VLTR P+G E+C+ C+LCA A Sbjct: 3 LKALAQSLGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAA 62 Query: 70 CPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 CP I ++ AE G Y + + IN RCIFCGLCEEACPT AI L DFEM Sbjct: 63 CPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMA 122 Query: 124 EYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 +Y+ DLVY KED+L+ G P + EA+ KP+ V ++P Sbjct: 123 DYEYSDLVYGKEDMLVDVVGTKP---------------QRREAKRTGKPVKVGYVVP 164 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 1/139 (0%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCAVACPV 72 + +++ TR YP+EP + R+RG VL D GEE+C AC LCA ACP Sbjct: 7 FKGFYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPN 66 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I++ +P + I RC+FCGLC EACP AIQ++ FE+ R +L+Y Sbjct: 67 NVITMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNLLY 126 Query: 133 EKEDLLISGPGKYPEYNFY 151 +K+ LL G G Y E Sbjct: 127 DKQRLLELGRGIYDEVEQT 145 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 69/127 (54%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP E L PR+RG L R P GEERC+AC LC CP I+++ E +DG Sbjct: 131 VTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRR 190 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEY 148 + I+ ++CI+CG C+EACP AI P+FE ++L+Y+KE LL +G E Sbjct: 191 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEI 250 Query: 149 NFYRMAG 155 + Sbjct: 251 AANLESE 257 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 6/142 (4%) Query: 7 LVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66 + G + + F K T YP PR+RGR L +G E CV C LC Sbjct: 1 MNGVAAIAKGMATTLKVLFRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELC 60 Query: 67 AVACPVGCISLQKAETK------DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 VACP I++Q AE G Y ++++ RCIFCG+CEEACPT + LT +F Sbjct: 61 QVACPAAAITVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGP 142 E+ ++ R+ L+ +KE L+ P Sbjct: 121 ELADFTRESLILQKEQLVNRNP 142 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 73/153 (47%), Gaps = 6/153 (3%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 G + + F R T YPEE PPR+ GR VL R PDG E+C+ C LCA Sbjct: 4 GVLDALGGFRLTLRQVFEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAG 63 Query: 69 ACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 ACP CI ++ + T G + + IN+ RCI C LC EACPT AI + FE Sbjct: 64 ACPARCIYVRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEF 123 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAG 155 R+D +Y K +L++ G + Sbjct: 124 AFTNREDAIYTKAELVVDDEGHPRRQPWEDWRD 156 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 4/165 (2%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTR-DPDGEERCVACNLCAVA 69 ++ + + F+K T YP E L PRYR L R G ERC+ C LC Sbjct: 44 ADIIKGLGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKI 103 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 C CI + E +DGR + + IN RCI+CGLC E CP AI + FE +R Sbjct: 104 CTSNCIRILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAH 163 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 KED L + ++ + + E + P+D Sbjct: 164 FGL-KEDFLKDLEEAKSHHQLEFAGFGSV--RPSADKEVKQTPLD 205 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 7/145 (4%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + + H + ++ET YPE+ P +RG +L RD +G E C AC LCAVA Sbjct: 24 LWNIIKGMIITFKHIWKRKETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVA 83 Query: 70 CPVGCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 CP I+++ AE K G Y + IN RCIFCG CEEACP AI LT F Sbjct: 84 CPAEAITMEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAP 143 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPE 147 YKR+ +Y K+DLLI P + + Sbjct: 144 ANYKREGFIYGKQDLLIPTPAEKKK 168 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 76/146 (52%), Gaps = 7/146 (4%) Query: 8 VGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLC 66 FG +R + K YPEE V + PR+RGR L R D + E+CV C+LC Sbjct: 26 RAFGETLRGLKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLC 85 Query: 67 AVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 A ACP CI + AE G Y + IN SRCIFCG CE ACP AI + D+ Sbjct: 86 AAACPADCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDY 145 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYP 146 EM +Y R DL++ KE LL + P Sbjct: 146 EMSDYNRDDLIFTKEMLLAEPLERTP 171 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCAVACPV 72 +R + H F + T YPEE PR+RG L D GE CVAC LCA CP Sbjct: 75 IRGFLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPT 134 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 C+ + +++G F + RC+FCGLC + CP AI ++ ++E R+ L+Y Sbjct: 135 SCLEMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIY 194 Query: 133 EKEDLLISGPGK 144 K +L G + Sbjct: 195 VKTELAAIGSQR 206 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 145 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 13/144 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + + L+ G T H + T YPE+ L P YRG L RD G +C Sbjct: 22 LYIPALVAGLKTT-------LGHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKC 74 Query: 61 VACNLCAVACPVGCISLQKAETK------DGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 VAC +CA ACP CI + A YPE F I+ RCI+CG+CEEACP AI Sbjct: 75 VACYMCATACPAHCIDIVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAI 134 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLL 138 +LT +++ R+ +V++KE LL Sbjct: 135 ELTTLYDLTGLSREQMVFDKEKLL 158 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 52/138 (37%), Positives = 66/138 (47%), Gaps = 6/138 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 ++ L G T + + + T YPE L PR+RG + DG+ +CV Sbjct: 3 YIRSTLAGMATTFKHLVD------PHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCV 56 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 AC LC CP CI L E + G YP F I+ RCIFCG C+E CP AI L +E Sbjct: 57 ACGLCPTVCPANCIKLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYE 116 Query: 122 MGEYKRQDLVYEKEDLLI 139 EY R VY+ E L Sbjct: 117 NAEYDRASFVYDLERLTA 134 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 81/193 (41%), Gaps = 19/193 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLH--------AFAKR--------ETRMYPEEPVYLPPRY 44 M E++ G GT + KR T YPEE P Y Sbjct: 16 MYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNVTLQYPEERAPYAPAY 75 Query: 45 RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFC 102 RG L DG+ RCVAC +CA CP CI ++ AE D YP F I+ RCI C Sbjct: 76 RGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVC 135 Query: 103 GLCEEACPTTAIQL-TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGK 161 G C EACP AI++ + + Y+R +++++ LL P Y + R +I Sbjct: 136 GFCVEACPKDAIRMDSGEHTPPSYERSAQIWDEKRLLRGPPVSYQYDPWLRRGSPSIPPD 195 Query: 162 DKGEAENEAKPID 174 E AKP Sbjct: 196 KLEEMRARAKPFP 208 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + H F K T YP+E P +RG L + +CV C LC CP Sbjct: 5 LINGLKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHS-KAKCVCCYLCPTVCPA 63 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 CI+++ E ++ Y E + I+ RCIFCG C EACP A+++T +FE+ YKR+D V+ Sbjct: 64 KCITVEAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVF 123 Query: 133 EKEDLLI 139 KE LL Sbjct: 124 VKERLLE 130 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 11/149 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL-----PPRYRGRIVLTRDPDGEER 59 L G + + + F YP+ P L R+RG VL RD +G E+ Sbjct: 2 GYLRNIGAIAKGMGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEK 61 Query: 60 CVACNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFCGLCEEACPTTA 113 CVAC LCA ACP CI ++ AE + Y + + I+++RCIFCG C EACPT A Sbjct: 62 CVACFLCAAACPSNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDA 121 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 I FE+ + +LVY KE LL P Sbjct: 122 ITHGHGFELATFNASNLVYRKEQLLSGKP 150 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 142 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 1/133 (0%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 F ++ + + F+ T YP+ E RYRG L RD +GE +CVAC LCA Sbjct: 17 FADLANALTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCAR 76 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP CI + E + G +P F I+ +RC+FCGLCE+ACP AI L +E + Sbjct: 77 ICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSA 136 Query: 129 DLVYEKEDLLISG 141 DLV ++DLL Sbjct: 137 DLVIGRDDLLAKP 149 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 142 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 1/135 (0%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACP 71 + + + F+ T YP E + L PRYR L R D G ERC+ C LC C Sbjct: 34 LFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICT 93 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 CI + + +D R + + IN RCI+CGLC E CP AI + FE +R Sbjct: 94 SNCIRIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYG 153 Query: 132 YEKEDLLISGPGKYP 146 + E L K Sbjct: 154 SKSEFLTSEQDAKDC 168 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 59/128 (46%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + + H F K T YP E + R+RG + DG +CV C LC Sbjct: 11 LTEILKGLSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKV 70 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP CI ++ +G + ++ SRCI+CG CEE CP AI + ++ + R + Sbjct: 71 CPSECIHIETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130 Query: 130 LVYEKEDL 137 V + L Sbjct: 131 YVINMKTL 138 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 68/180 (37%), Gaps = 10/180 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 ++ LL G T + F K+ T+ YPE L R+RG +V+ + + E + Sbjct: 6 YIQGLLCGVKTLAVGLRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHK 65 Query: 60 CVACNLCAVACPVGCI----SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 CV C LC +ACP I + + N C+FC LC ACP AI Sbjct: 66 CVGCGLCMMACPNNSINVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAIT 125 Query: 116 LTPDFEMGEYKRQDLVYEK----EDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 FE + R L+ + LL KDK AE EA+ Sbjct: 126 FDQSFENAVFDRSKLILQLNQPGSRLLEKPARSAAPKAATPADDATTKPKDKPMAEAEAE 185 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 79/193 (40%), Gaps = 28/193 (14%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRET---------------RMYPEEPVYLPPRYRG 46 + LL G G + + F R+T YPEE P YRG Sbjct: 18 YVPNLLRGLGITAKHF---FRNLFGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRG 74 Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG---------RWYPEFFRINFS 97 L DG+ RCVAC +CA CP CI ++ E +D YP F I+ Sbjct: 75 LHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDEL 134 Query: 98 RCIFCGLCEEACPTTAIQL-TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGM 156 RCI CGLC +ACP AI++ T EY RQ+ VY+ LL P +P + + G Sbjct: 135 RCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIPKLLKGAPVSHPSDPWNKREGS 194 Query: 157 AIDGKDKGEAENE 169 EA Sbjct: 195 EEPHHVHKEAHTR 207 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 86/182 (47%), Gaps = 15/182 (8%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 L + G ++ H F+K+ T YPE YL P +RGR +L RD +G ERC Sbjct: 22 YLPAIATGLAITIK-------HFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCT 74 Query: 62 ACNLCAVACPVGCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAI 114 AC LCAVACP IS+ AE G Y + +N RCIFCGLCEEACP A+ Sbjct: 75 ACGLCAVACPAEAISMVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAV 134 Query: 115 QLTPDFEMGEYK-RQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPI 173 L D + + R +++ K+ L+ +Y + + A+D K P Sbjct: 135 YLRHDEFVPVFTERDQVIWGKDLLVEDMNNRYTREAWTKEEARALDAKRASGEVTNVVPR 194 Query: 174 DV 175 + Sbjct: 195 AI 196 >UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B4K6_STRRD Length = 417 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 17/169 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V+ + + H ++ T+ YPE LPPR RG I L EE C C LCA CP Sbjct: 9 LVKGLSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALV-----EENCTVCMLCARECPD 63 Query: 73 GCISLQKAET---------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 CI + + R + F I+FS C++CG+C E CP A+ +P+FE Sbjct: 64 WCIYIDSHKETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYA 123 Query: 124 EYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 E ++LV+EK+ L P A K+ A +P Sbjct: 124 EGDIRNLVHEKDKLAAWAQTVPPPPAHEPNAD---PPKELAAASRPVRP 169 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 9/140 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 V+ + + H F K+ T YPE+ + P YRG+ +L RD G E C AC LCA++ Sbjct: 30 LVAIVKGLLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALS 89 Query: 70 CPVGCISLQKAETKDG-------RWYPEFFRINFSRCIFCGLCEEACPTTAIQLT--PDF 120 CP I+++ AE K Y E + IN RCIFCGLCEEACP AI LT Sbjct: 90 CPAEAITMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVL 149 Query: 121 EMGEYKRQDLVYEKEDLLIS 140 Y+R++ ++ K+ L++ Sbjct: 150 VPSNYERENFIFGKDKLVMP 169 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 83/176 (47%), Gaps = 20/176 (11%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 + ++L G T R H K++T YPE+ +PP YRG L +DP+G E+CV Sbjct: 18 YIPQILGGLKTTFR-------HLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCV 70 Query: 62 ACNLCAVACPVGCISL------QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 +C LC CP I + A T P F I+ RCI+CG+C+E CP AI Sbjct: 71 SCQLCEFVCPPKAIRIWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIF 130 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 L + M Y R ++V K+ L G G P+ +F D K E N+A Sbjct: 131 LQQQYTMTGYTRAEMVNNKQRLYELG-GTLPDQHF------KWDKKKAAELHNKAH 179 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 7/157 (4%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEE 58 + + + G T + + T YPEE + P YRG L +D +G Sbjct: 22 LYVPLFVQGLTTTFKHLK---KSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRV 78 Query: 59 RCVACNLCAVACPVGCISLQKAETK--DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +CVAC LCA ACP CI + AE+ D YP+ F I+ RCI+CG+CEEACP AI+L Sbjct: 79 KCVACFLCATACPAHCIDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIEL 138 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRM 153 T + + R+++V++KE LL + + Sbjct: 139 TSLYNLTGRSREEMVFDKEKLLSVYDETKDKEPMKSV 175 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 7/142 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 +K LL G GT + + + G F + T YPE L PR+RGR+++ D +G + Sbjct: 8 YIKGLLHGIGTLLTGMKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNK 67 Query: 60 CVACNLCAVACPVGCISLQ-----KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C+AC LC +ACP I++ ET + + + C+FC LC ACP AI Sbjct: 68 CIACGLCQMACPNDTITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAI 127 Query: 115 QLTPDFEMGEYKRQDLVYEKED 136 + +FE + R LV Sbjct: 128 RFDTEFENAVFDRSKLVLTLNK 149 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERC 60 EL G + + + + F+ T YP + + + P YRG I L +D G +C Sbjct: 4 YFSELFTGGWSLIVGLKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKC 63 Query: 61 VACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 + C C CP CI + + + F ++F++C CG C E CPT A+ + + Sbjct: 64 ITCGSCMRECPSDCIVVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNE 123 Query: 120 FEMGEYKRQDLVYE 133 +E+ +KR+D Y+ Sbjct: 124 YELAGFKREDFHYD 137 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 3/147 (2%) Query: 10 FGTQVRSIWMIGLHAFA-KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 F + + H + T YP LP YRG + L R D E+CV C+LC Sbjct: 12 FFEILLGMRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEA 71 Query: 69 ACPVGCISLQ--KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 ACP I + + + + + + + ++ +RC+FCGLC +ACP A+ ++ +FE Y Sbjct: 72 ACPSRVIRVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYD 131 Query: 127 RQDLVYEKEDLLISGPGKYPEYNFYRM 153 ++ L KE LL G +PE Sbjct: 132 KRHLHLNKEQLLAIGDRAFPEREKRLE 158 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 13/172 (7%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF---------AKRETRMYPEEPVYLPPRYRGRIVLTR 52 + E+L G R + + T YPEE V P YRGR VL + Sbjct: 18 YIPEILKGMWLTSRRFFHNLFGFIPFFLGTEKDRRIMTVYYPEEQVEYPIAYRGRPVLAQ 77 Query: 53 DPDGEERCVACNLCAVACPVGCISLQKAETKDG----RWYPEFFRINFSRCIFCGLCEEA 108 + DG+ CVAC LC +ACP CI + AE +PE F I+++ CIFCG CEEA Sbjct: 78 NEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQYERWPEVFNIDYAICIFCGNCEEA 137 Query: 109 CPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG 160 CP AI ++ D E+ R+ ++Y KE LL F R + Sbjct: 138 CPEEAIFMSDDCEISMLDRKQMLYTKEQLLTPVADLQKRIEFTRNMYAKWNY 189 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 9/145 (6%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + G ++ + T YPE+ R+RG + RD G ERC Sbjct: 21 FYFYSIGKGLWITLKHFIKAA--ILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERC 78 Query: 61 VACNLCAVACPVGCISLQKAETK-------DGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 +C C CP I ++ E Y + F I+ RCIFCG+CEEACP A Sbjct: 79 TSCFCCMWICPADAIYIEAGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGA 138 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDLL 138 I L EM R+DL+ KE ++ Sbjct: 139 IYLDGPGEMATDNREDLILTKERMM 163 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 3/132 (2%) Query: 11 GTQVRSIWMIGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCVACNLCA 67 G +W++ K T +YP E L RYRG L R G ERC+ C LC Sbjct: 30 GELFIGLWVVLREMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCE 89 Query: 68 VACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 C CI ++ DGR + INF RC++CGLC + CP AI D+E +R Sbjct: 90 KICVSNCIRMETTLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQR 149 Query: 128 QDLVYEKEDLLI 139 ++K+ L Sbjct: 150 AFFGFKKDLLTK 161 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 8/148 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEP---VYLPPRYRGRIVLTRDPDGEE 58 + + G T + F + T YPE +++ PR+RGR+V RD +G Sbjct: 8 YFRGIADGVKTLGVGLKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAH 67 Query: 59 RCVACNLCAVACPVGCISL-----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 RCVAC +C ACP I + ET + + ++ + C+FC LC AC A Sbjct: 68 RCVACTMCEKACPNDTIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDA 127 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDLLISG 141 I+ T DFE + R LV + + G Sbjct: 128 IEFTNDFEHAVFDRSKLVLHLDKEVYDG 155 >UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6 Tax=Chloroflexi (class) RepID=A7NL08_ROSCS Length = 449 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 68/188 (36%), Gaps = 12/188 (6%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRE------TRMYPEEPVYLPPRYRGRIVLTRD-PD 55 + LL G R K T YPEE + LP +R +L D Sbjct: 32 GQGLLTGLDVVFRHFRDALTRKLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDET 91 Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRW---YPEFFRINFSRCIFCGLCEEACPTT 112 G+E C +C C CP I + +A F I + C+ CGLC E CP Sbjct: 92 GQELCTSCFQCQRICPPQVIHMTQARDPSTGKPVPAVAEFLIEYDACMSCGLCAEVCPFD 151 Query: 113 AIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 AI++ +FE L K L Y + A + K ++ + +P Sbjct: 152 AIKMDHEFEYSTDVHGGLTINKAAL-NRPISYYEKIAPTFWAEVKDSALKKLQSNVKRRP 210 Query: 173 IDVKSLLP 180 D+ + P Sbjct: 211 -DLIGVAP 217 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKR---------ETRMYPEEPV--YLPPRYRGRIV 49 L+ +L G +R + + L + T YPE +LP YRG V Sbjct: 17 FYLQSILGGLWLTIRHLVLALLGKSRNKKELAGSGIGVTMQYPEARWDKHLPKYYRGAPV 76 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG-----RWYPEFFRINFSRCIFCGL 104 L + DG ERCV+C LC CP I++ ++G P F+I+ RCI+CG+ Sbjct: 77 LVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGPWGKVEKAPREFQIDMLRCIYCGM 136 Query: 105 CEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 CEEACP AI ++ ++ + ++ K L G Sbjct: 137 CEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLYELG 173 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 9/160 (5%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVL-TRDPDGEER 59 + L E+L G G R I FA T YP+ P +RGR VL RD ER Sbjct: 19 LYLPEVLKGLGYTFRQI-------FAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGER 71 Query: 60 CVACNLCAVACPVGCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CVAC LC+ CP IS+Q ET+ + +P F IN RCI+CG CEE CP AI ++ Sbjct: 72 CVACGLCSRVCPPMAISIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSD 131 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAI 158 ++++ R++ + +K LL+ +F + + Sbjct: 132 EYDITFNNRENAIMDKSKLLVPVARVQKRLDFLKEYKNKV 171 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 7/144 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF--AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEER 59 L +L G T ++ + + F K T YPEE PR++G VLT DG R Sbjct: 14 FLPGILGGLATTMKHL---LKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLR 70 Query: 60 CVACNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C AC LCA CP CI + AE D +P + I+ RC+FCG CEEACP AI+L Sbjct: 71 CTACMLCATNCPAECIKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLG 130 Query: 118 PDFEMGEYKRQDLVYEKEDLLISG 141 P+++ + +Y+ L Sbjct: 131 PEWQTPGVNGANFIYDINHLAYRP 154 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 133 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 1/140 (0%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 +KE+++G + + + + F + T YP E +P R+RG I L D +G RCV Sbjct: 4 FIKEIVLGLWSLIVGMRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCV 63 Query: 62 ACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC +C ACP GCI + + + + + ++F++C CG C E+C AIQ + + Sbjct: 64 ACGMCVRACPSGCIKVSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVY 123 Query: 121 EMGEYKRQDLVYEKEDLLIS 140 K++D Y L Sbjct: 124 NHVSTKKEDFYYNLIKDLEE 143 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 6/154 (3%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 ++ L + + H T YP E + R+RGRI ++C+ Sbjct: 11 YGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEF-----DKCI 65 Query: 62 ACNLCAVACPVGCISLQKA-ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC +C CP+ + ET + + I+F CIFCG C E CPT + +T ++ Sbjct: 66 ACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEY 125 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMA 154 E Y R +L Y + L +Y + Sbjct: 126 EFSTYDRHELNYNQIALGRLPMSVIDDYTIRTIW 159 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 ++ + + + + H + T YP E + RYRGRI ++C+ Sbjct: 11 YTRDAVDAARNLTQGLSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEF-----DKCI 65 Query: 62 ACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC +C CP+ + K+ + + I+F CIFCG C E CPT + +T ++ Sbjct: 66 ACEVCVRVCPINLPVVDWVMNKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEY 125 Query: 121 EMGEYKRQDLVYE 133 E+ + R L Y+ Sbjct: 126 ELAAFDRHSLNYD 138 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 11/146 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVY-----LPPRYRGRIVLTRDPDGEER 59 ++ + + + F E YP+ P L R+RG VL RD +G E+ Sbjct: 24 SIVSNVTGIAKGMSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEK 83 Query: 60 CVACNLCAVACPVGCISLQKAETKD------GRWYPEFFRINFSRCIFCGLCEEACPTTA 113 CVAC LCA ACP CI ++ A+ + Y + + I+++RCIFCG C EACPT A Sbjct: 84 CVACFLCAAACPSNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDA 143 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDLLI 139 I FE+ +++ KED+L+ Sbjct: 144 ITHGHGFELASMHATNMIMRKEDMLV 169 >UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUZ9_SORC5 Length = 224 Score = 132 bits (331), Expect = 8e-30, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 73/171 (42%), Gaps = 20/171 (11%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF--AKRE-----------TRMYPEEPVYLPPRYRGRI 48 + E++ G G ++ + K + T YPEE P R+RG Sbjct: 35 YIPEMVKGLGITMKHFFKNTKEMVLGQKPDPVLHALEPGVTTISYPEEKRPYPERFRGIH 94 Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFC 102 LT D RCVAC C+ ACP CI+++ AE DG YP F I+ RC+FC Sbjct: 95 RLTLREDNSPRCVACLCCSTACPAQCIAIEPAEYPDGDRRKGYERYPSSFVIDELRCVFC 154 Query: 103 GLCEEACPTTAIQLTPDFEMGEYK-RQDLVYEKEDLLISGPGKYPEYNFYR 152 G C EACP AI++ Y R+ +Y ++ L+ + Sbjct: 155 GFCVEACPVDAIRMDTGLHAVPYDSREQFIYRRDLLMSLSDRSGSRLTANK 205 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 14/154 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGL---HAFAKRETRMYPEEPV---------YLPPRYRGRI 48 + + ++ G GT +R YPE+ P +RG Sbjct: 22 LFVPSIIKGLGTTMRHFVENFGRNGSNAKNIWVVQYPEQKRDDRPVEQGGQFRPTFRGVH 81 Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAET--KDGRWYPEFFRINFSRCIFCGLCE 106 L +D DG RCVAC +CA ACP CI + E+ +D YP+ F I+ RCI+CG+CE Sbjct: 82 RLNKDEDGRVRCVACFMCATACPANCIHIVAEESPWEDREKYPKQFDIDELRCIYCGMCE 141 Query: 107 EACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS 140 EACP AI+LTP +E+ R +L+++K LL Sbjct: 142 EACPVDAIELTPHYEVTGLTRAELIFDKSKLLEI 175 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 131 bits (330), Expect = 9e-30, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 8/142 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERC 60 T K ++ G G R + F T YPE+ +PP +RG VL D GE +C Sbjct: 13 TGKSIVTGLGITFREM------MFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKC 66 Query: 61 VACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 +C CA ACPV I+++ + + + + F I+ SRC+ C C EACP ++ + D Sbjct: 67 TSCMQCAQACPVNVITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYD 126 Query: 120 FEMGEYKRQDLVYEKEDLLISG 141 +E+ + ++LV+E EDLL G Sbjct: 127 YELCKVNPENLVFEFEDLLRLG 148 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 4/152 (2%) Query: 12 TQVRSIWMIGLHAFAKR--ETRMYPEEPVYLPPRYRGRIVLTRDPDGE-ERCVACNLCAV 68 ++++ + T YP E V L RYR L R + E ERC+ C LC Sbjct: 32 ELFVGLFVMMRELLKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEK 91 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 C CI ++ + ++GR E + IN RCI+CG C E CP AI ++E +R Sbjct: 92 ICISNCIRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRS 151 Query: 129 DLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG 160 Y K+D L + F + D Sbjct: 152 YFGY-KQDFLTPIDKLKNQVEFEGAGSLRKDA 182 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 6/138 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYL--PPRYRGRIVLTRDPDGEER 59 L L+ G T + F K+ T YPE L R+RG + + + + E R Sbjct: 10 YLGGLIHGISTLATGMKTSIKVYFRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHR 69 Query: 60 CVACNLCAVACPVGCISLQ----KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 CVAC LC +ACP I++ + E + + + C+FC LC ACP AI Sbjct: 70 CVACGLCQIACPNDTITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAIT 129 Query: 116 LTPDFEMGEYKRQDLVYE 133 +FE + R LV + Sbjct: 130 FDQNFEHAVFDRTKLVLQ 147 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCV 61 LKE+L G + V + + T YP E V L P +RG I L D G +C+ Sbjct: 4 LKEILEGGWSLVEGMRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCI 63 Query: 62 ACNLCAVACPVGCISLQKAET-KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC C CP I +Q + G + I+F+RC CG+C E+CPT +Q + ++ Sbjct: 64 ACGTCERMCPSNVIKVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEY 123 Query: 121 EMGEYKRQDLVYEKED 136 E+ R D V + Sbjct: 124 ELAGESRWDGVIDLMQ 139 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 6/137 (4%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 +E + + H T YP E + R+RGRI ++C+ Sbjct: 11 YSQESFRAARYIGQGFIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEF-----DKCI 65 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYP-EFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 C +C CP+ + +D R + + I+F CIFCG C E CPT + +T ++ Sbjct: 66 VCEVCVRVCPINLPVVDWNFQQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEY 125 Query: 121 EMGEYKRQDLVYEKEDL 137 E+ Y R +L Y++ L Sbjct: 126 ELSVYDRHELNYDQIAL 142 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 128 bits (323), Expect = 7e-29, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 62/137 (45%), Gaps = 7/137 (5%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPD-GEERCVAC 63 EL VG + + +H T YP E + L RYR L R D G ERC+ C Sbjct: 31 ELFVGLWLVFKELCKAQIH------TVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGC 84 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 LC C CI ++ + +D R + INF RCI+CGLC E CP AI +E Sbjct: 85 GLCEKICVANCIRMETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENA 144 Query: 124 EYKRQDLVYEKEDLLIS 140 +R +K+ L Sbjct: 145 CEQRASFALKKDMLTPI 161 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 13/133 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K L+ G G ++ H F + T YPE + +P R+ GR ++C Sbjct: 1 MHGKGLIKGLGVTIK-------HFFKPKVTVQYPEVRLPIPERFFGRPQFFY-----DKC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +ACN C ACP I L+ T D + + + C+FCG+C+EACP AI+ + DF Sbjct: 49 IACNQCVNACPNNVIKLETD-TVDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDF 107 Query: 121 EMGEYKRQDLVYE 133 E+ +Y R D+ + Sbjct: 108 ELTQYNRPDIKIQ 120 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 13/145 (8%) Query: 10 FGTQVRSIWMIGLHAF-----AKRETRMYPEEPVY--LPPRYRGRIVLTRDPDGEERCVA 62 T + + + HA K+ T YPEE LP YRG L D G ERCV+ Sbjct: 19 ISTLAKGLLITLGHAIAILRGKKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVS 78 Query: 63 CNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 C LC CP I++ E P F I+ RCI+CG+CEE CP AI L Sbjct: 79 CQLCEFICPPRAITIIPEEIPSTDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFL 138 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISG 141 D+ + R ++V++K+ L G Sbjct: 139 RKDYAITGLSRAEMVHDKKKLYEIG 163 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 125 bits (315), Expect = 6e-28, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 8/132 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 V+ + + +K+ T YP+EP +P R+RG + C+ CN CA Sbjct: 1 MNGLVQGLGVTLKSMVSKKVTTSYPDEPFLMPDRFRGIQHF-----IPDLCIVCNQCARI 55 Query: 70 CPVGCISLQKAETKD---GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 CP CI+L D + F +NF CI C LC E CPT AI +T FE+ Y Sbjct: 56 CPTDCITLTGKPNPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYS 115 Query: 127 RQDLVYEKEDLL 138 R DL + E L Sbjct: 116 RDDLFKDVEWLT 127 >UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16 Tax=Actinomycetales RepID=C7Q2E0_CATAD Length = 531 Score = 125 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 + + + T YP+ LPPR RG I L EE C +C LCA C Sbjct: 40 AGLAKGLATTLKTMTHRSVTAQYPDVKPELPPRSRGVIALL-----EENCTSCMLCAREC 94 Query: 71 PVGCISLQKAET----------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 P CI + + R + F I++S C++CG+C EACP A+ +P+F Sbjct: 95 PDWCIYIDSHKEVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALFWSPEF 154 Query: 121 EMGEYKRQDLVYEKEDL 137 E E+ DL++EK+ L Sbjct: 155 EYAEFDIVDLLHEKDRL 171 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 8/163 (4%) Query: 19 MIGLHAFAKRETRMYPEE-PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 K T P + RYRG V + +C+ C CA CP I++ Sbjct: 16 KAWKFLVRKPVTIEVPNKIRREASERYRGFHV-----NDWGKCIGCGTCAKICPTDAITM 70 Query: 78 QKAET--KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + ++ P+ I++ RC FC LC + C T ++++T ++ +D ++ Sbjct: 71 VEVPDLTQEDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPT 130 Query: 136 DLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSL 178 D ++ E+ + + + + + E P++ + Sbjct: 131 DKGLNAKKGLYEFGKAPLGWVRDENSELLDLERIEMPVEPPEV 173 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 8/131 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 + + + K+ T YP +P+ LP R+RG E+C+ CN C+ Sbjct: 1 MKGLFKGLKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFY-----PEKCIVCNQCSNI 55 Query: 70 CPVGCISLQKAETKDGRWYPE---FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 CP CI L + D + + INF CI C LC E CPT AI +T +FE+ EY Sbjct: 56 CPTDCIQLTGKKHPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYS 115 Query: 127 RQDLVYEKEDL 137 R DL + L Sbjct: 116 RDDLFKNLQWL 126 >UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1 Length = 204 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 69/148 (46%), Gaps = 11/148 (7%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKR-----ETRMYPEEPVYLPPRYRGRIVLTRDPDG 56 L + G G ++ + F R ET YPEE P R RG L + DG Sbjct: 42 FLPATIKGLGITLKHF---AKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDG 98 Query: 57 EERCVACNLCAVACPVGCISLQKAETKDG--RWYPEFFRINFSRCIFCGLCEEACPTTAI 114 RCVAC C CP CI++ AET D YP F I+ RC+ CGLC E+CP AI Sbjct: 99 AARCVACMCCPTVCPANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAI 158 Query: 115 QL-TPDFEMGEYKRQDLVYEKEDLLISG 141 ++ T +R D + K+ LL G Sbjct: 159 RMDTGIHAPPVEERGDGIMVKDQLLDLG 186 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKR--ETRMYPEEP--VYLPPRYRGRIVLTRDPDGE 57 LK + G + + + + + F + T YPE + + RYRGR+ + D DG Sbjct: 14 YLKRCITGPWSLICGLSVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGN 73 Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C AC +C ACP I++ + G+ + +F+ C CGLC EACP AI+++ Sbjct: 74 NHCTACGMCERACPNASINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMS 133 Query: 118 PDFEMGEYKRQDL 130 P FE+ DL Sbjct: 134 PAFEVATTDPNDL 146 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 11/157 (7%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G ++ F K+ T YP+ L R+RG +C Sbjct: 1 MQGKGLLTGMWVTLK-------EFFRKKVTEEYPDVMPDLGDRFRG----GTLKLQTSKC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC +C ACP G I L ++ + + + C+FC LC +ACP I T +F Sbjct: 50 IACGICQNACPNGSIKLTSVRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEF 109 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMA 157 Y R+DLV++ +L PE G Sbjct: 110 AFSGYSREDLVFDCIELARRRGYDVPEVKEPPADGEK 146 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 122 bits (307), Expect = 5e-27, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 4/166 (2%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 + + E + G T ++ T YPE + YR + L PDG RC Sbjct: 15 LYIFEAIRGLWTTLKHAARGLFRYEELP-TISYPEGQPEIRNTYRAKHRLMLRPDGTPRC 73 Query: 61 VACNLCAVACPVGCISLQKAETKDGR--WYPEFFRINFSRCIFCGLCEEACPTTAIQL-T 117 VAC +CA ACP CI ++ ++ D R F I+ C+FCGLC EACP A+++ T Sbjct: 74 VACGMCAAACPAHCIFIEATQSDDPRIEKRVMRFDIDHLTCVFCGLCAEACPVDALRMDT 133 Query: 118 PDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDK 163 R+D V DL P YP +MA + Sbjct: 134 KQIIFEHRSREDFVAHLYDLTNWDPKDYPNDEQSQMAPGGTKNAEA 179 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 122 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + + H F K+ TR YPE +P R RG + +RC++C C CP Sbjct: 8 ILKGMGITLKHLFEKKITRQYPEYKREMPERTRGMLT-----VDMDRCISCLQCMRVCPD 62 Query: 73 GCISLQKAETK-----DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CI++ + R Y F I+ SRC++C LC E CP I T +FE+ Y R Sbjct: 63 HCITIVQDRRDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNR 122 Query: 128 QDLVYE 133 DL + Sbjct: 123 LDLARQ 128 >UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Actinomycetales RepID=D2PVJ5_9ACTO Length = 214 Score = 122 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 23/163 (14%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 + + + + T YP+ LPPR RG I L EE C +C LCA C Sbjct: 6 KGLIDGLKVTAKTLSRRAVTEQYPDVQPELPPRSRGVIALM-----EENCTSCMLCAREC 60 Query: 71 PVGCISLQKA----------ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 P CI + + R + F I+FS C++CG+C EACP A+ +P+F Sbjct: 61 PSWCIYIDSHTETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEF 120 Query: 121 EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDK 163 E E ++L +EK+ L ++ + A ID Sbjct: 121 EYAETDLRNLTHEKDRL--------RDWMWTVPAPQPIDPGPS 155 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD-PDGEERCV 61 ++++L GF + + + + G A T YP E + +P R+RG I L D G+ RC Sbjct: 7 IRDVLSGFKSLLIGMRITGREAAKPILTVQYPRETLKMPARFRGHIQLILDPETGKPRCT 66 Query: 62 ACNLCAVACPVGCISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 AC LC ACP CI L D + + ++F++C CG C E CP+ AI+ + + Sbjct: 67 ACTLCEKACPSECIDLDGLRREGDKKKSVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQY 126 Query: 121 EMGEYKRQDL 130 + R+ Sbjct: 127 NVVSLGREQF 136 >UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0 Length = 202 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 18/150 (12%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIV-----------------LTR 52 F ++ + + + K T YP+E + P R+RG+ Sbjct: 21 FLDFIKGLTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMS 80 Query: 53 DPDGEERCVACNLCAVACPVGCI-SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 G+ RCVAC +C ACP+ + ++ + DG F +N C+FCGLC +ACP Sbjct: 81 FEKGKSRCVACYMCQTACPMPTLFRIEAVQMPDGTKKVVRFDMNLLNCLFCGLCVDACPV 140 Query: 112 TAIQLTPDFEMGEYKRQDLVYEKEDLLISG 141 + ++ EM Y+R V +D+ G Sbjct: 141 ECLTMSDIHEMAVYRRSQAVIHMDDMEKIG 170 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 G ++ + + H F T YPEE + + R RG V+ +E C+AC CA AC Sbjct: 9 GGILKGMRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVI----WVKETCIACLACARAC 64 Query: 71 PVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT-TAIQLTPDFEMGEYK 126 PV I+++ + +D + + I+F CIFCGLC E+CPT AI + +E Y+ Sbjct: 65 PVKAINMEVSRGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYR 121 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 22/182 (12%) Query: 1 MTLKELLVGFGTQ----VRSIWMIGLHAFAKRE-TRMYPEE-PVYLPPRYRGRIVLTRDP 54 + + E++ G ++W F K T YPEE RGR +LT Sbjct: 17 LYIFEVIRGLCITGSVFFGNMWKWLT--FRKGALTAYYPEELRADYSSANRGRHLLTTRA 74 Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGR---WYPEFFRINFSRCIFCGLCEEACPT 111 DG+ +CV+CN+CA CP CI +Q A + P+ F I++SRCIFCG C EACP Sbjct: 75 DGKVQCVSCNMCATVCPAYCIEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPE 134 Query: 112 TAIQLTPDF-EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEA 170 AI+++ D + R+++ ++ L N+ + A G+A E Sbjct: 135 DAIRMSKDTPNFPGFDRENMWATQDLL----------MNWQPASDAAKSYPGSGQAHQEV 184 Query: 171 KP 172 P Sbjct: 185 HP 186 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 5/121 (4%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + + + K T YPE LPPR+ G L E+C+AC LC ACP Sbjct: 9 LLKGLAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLH-----SEKCIACGLCQQACPN 63 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + + ++ + + + C+FCGLC EACPT A+ ++E+ +Y+ +D+ Sbjct: 64 KVIKVGSIKDENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDIKL 123 Query: 133 E 133 Sbjct: 124 T 124 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 10/141 (7%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF---AKRETRMYPE--EPVYLPPRYRGRIVLTRDPDG 56 ++ G T + + + G + T+ YP+ E + + R+RG +++ D + Sbjct: 3 YFSDIFKGIKTLLTGMSVTGKYFLHSRKGAITQQYPDNRETLKMFDRFRGEVIMPHDEEN 62 Query: 57 EERCVACNLCAVACPVGCISL-----QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 RC C C +ACP G I + ET + + F + S C CGLC + CPT Sbjct: 63 RHRCTGCQKCEIACPNGTIEIIWDRGIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPT 122 Query: 112 TAIQLTPDFEMGEYKRQDLVY 132 AI+ +FE Y R L Sbjct: 123 DAIKWGQNFENSVYDRTALTR 143 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 11/145 (7%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + ++ T YP +PV + +RG+ RC+ C CA ACP I Sbjct: 1 MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKP-----AYDFSRCIGCGACATACPSNAI 55 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 ++ D + + IN+ RCIFCG CEE CPT AI L+ +FE+ K++D+ E Sbjct: 56 TMD----CDLDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAE 111 Query: 136 DLLISG--PGKYPEYNFYRMAGMAI 158 L G+Y E I Sbjct: 112 FQLCRCIFCGEYFETFREIEYVREI 136 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G + +W K+ET YPEE + + +RG C Sbjct: 1 MFGKGLLTGMSVTWKHLW-------GKKETVCYPEEKLPMTDNFRG----GNLAMDWRVC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 + C++CA ACP + L + + + + + RC++C LC EACP + D+ Sbjct: 50 IGCSMCANACPNKALDLTIVPDAKKKRHMKSYIHHSGRCLYCNLCVEACPVHTLVWDKDY 109 Query: 121 EMGEYKRQDLVYE 133 + + ++ + ++ Sbjct: 110 AIATWSKETMTHD 122 >UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT91_9BACT Length = 145 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 7/137 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEP--VYLPPRYRGRIVLTRDPDGEER 59 ++ L G T + + + G + T YPE + + R+ G + + D +G+ + Sbjct: 4 YIQGLFHGIRTLLTGLKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNK 63 Query: 60 CVACNLCAVACPVGCISLQKAETK-----DGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 CVAC LC ACP G I + R + + C+FC LC ACP AI Sbjct: 64 CVACGLCQAACPNGTIKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAI 123 Query: 115 QLTPDFEMGEYKRQDLV 131 + FE Y R LV Sbjct: 124 RFDTAFEHAVYTRDKLV 140 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 118 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 10/129 (7%) Query: 10 FGTQVRSIWMIGLHAF-AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 ++S+ HA ++ T YPEE + PR+RG ++ ERC+ C C Sbjct: 1 MIGMLKSMATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQ-----ERCIWCRQCEN 55 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP I + + ++G E + ++ +CI+C LCEE CP AI LT +FE + Sbjct: 56 VCPNDTIQIVTDDMRNG----EQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKD 111 Query: 129 DLVYEKEDL 137 DL Y KE L Sbjct: 112 DLAYNKEQL 120 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 15/156 (9%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPE-----EPVYLPPRYRGRIVLTRDPDGE 57 +++ + F + + + + T YP+ LPPRYRG + Sbjct: 12 IRDTVKSFWH---GLSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFL-----EVDS 63 Query: 58 ERCVACNLCAVACPVGCISL--QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 C C C ACP+GCI + +K + F I+ ++C+FCGLC E CPT +IQ Sbjct: 64 GICTGCQACERACPIGCIQISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCPTGSIQ 123 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFY 151 T +FE ++LV+ D + P + N Sbjct: 124 HTREFEGTHKHIRNLVFRWADPMNPFPVYKVDKNAE 159 >UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SQW6_BOTFB Length = 271 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 31/129 (24%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 R ++++ F T YP E Sbjct: 80 MSELFRGMYVVLEQYFRPPYTIYYPFEK-------------------------------I 108 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ E +DG + I+ ++CI+CG C+E+CP AI +P+ E R++ Sbjct: 109 CPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIVESPNAEYATETREE 168 Query: 130 LVYEKEDLL 138 L+Y KE L Sbjct: 169 LLYNKEKLF 177 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 19/153 (12%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T YP +P+ + +RG+ E+C+AC C +ACP ++++ D Sbjct: 15 TVKYPFKPLEVSHGFRGKP-----QYDAEQCIACGACTMACPANALTMET----DIIKGT 65 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYN 149 +++ RCIFCG CEE CPT AI L+ +FE+ + + DL L + Sbjct: 66 RQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQCQKPFA 125 Query: 150 FYRM----------AGMAIDGKDKGEAENEAKP 172 + +GM ID ++ E P Sbjct: 126 PKKEVDYVMALLIHSGMGIDDVEQQRPHFETCP 158 >UniRef50_C0GR32 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR32_9DELT Length = 223 Score = 117 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 34/193 (17%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGE--ER 59 T+++ + G + + + ++ F T YP + V YRG + L + R Sbjct: 23 TIRKTIKGLWSLGVGLKVTSVNFFRPPVTVHYPRQVVPSLEGYRGHVELVPSAEDPGASR 82 Query: 60 CVACNLCAVACPVGCISLQ-------------------------------KAETKDGRWY 88 C+ C C CP CIS++ +A R Sbjct: 83 CIGCGACVRICPGACISIKVSHKRPHLAPKKTGKPPDHDQGHFLIPMPKARALPGIARRS 142 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE-KEDLLISGPGKYPE 147 P F++N++ C CGLC E CP A+ + + + Y R + Y+ L K Sbjct: 143 PTSFKLNYNYCSLCGLCVETCPAGALAFSSNIYLAGYTRNEFKYDLLARLEYRARDKSRP 202 Query: 148 YNFYRMAGMAIDG 160 R+ D Sbjct: 203 AEGSRVQDNGRDN 215 >UniRef50_B6YR62 NADH dehydrogenase I subunit I n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR62_AZOPC Length = 152 Score = 117 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLP--PRYRGRIVLTRDPDGEER 59 +K ++ G V+ +++ L+ K+ T YPE+ + R RG++V++ + + + Sbjct: 3 QIKNIIKGIWHLVQGMYITMLNFLRKKVTEQYPEDRAKVFRYERMRGQLVMSHNEKNQHK 62 Query: 60 CVACNLCAVACPVGCISLQKAE-----TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C +C CP G I + + T+ + + + + C FC +C +CP AI Sbjct: 63 CTVCGICQANCPNGTIRIITKKELDEVTEKEKKTLDKYIYDIGSCTFCSICTISCPQNAI 122 Query: 115 QLTPDFEMGEYKRQDL 130 T +FE + R L Sbjct: 123 LWTTNFEHATFTRSKL 138 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 117 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 15/137 (10%) Query: 11 GTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVAC 70 + + + K T YP+ LPPR RG I L EE C C LCA C Sbjct: 7 SGLAKGLAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGLF-----EENCTVCMLCAREC 61 Query: 71 PVGCISLQKAET----------KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 P CI + + + R + F I+FS C++CG+C E CP A+ +P+F Sbjct: 62 PDWCIYIDSHKETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEF 121 Query: 121 EMGEYKRQDLVYEKEDL 137 E E +L +E++ L Sbjct: 122 EYAETDIHELTHERDKL 138 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 10/151 (6%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E + P+YRG L ++CV CN C CP I + Sbjct: 23 WMGIKYLFKKPVTIKIPFEKIEPAPKYRGFHTL-----DWKKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 E +I++ RC FC C + CPT A+ + + + +D E + Sbjct: 78 TWLEVDGKMEKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTED-ALELFNW 136 Query: 138 LISGPGKYPEYNF----YRMAGMAIDGKDKG 164 + P K E N YR + I+ K G Sbjct: 137 VPIHPDKVRELNEKFGDYRFPVVKIEKKADG 167 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 2/130 (1%) Query: 10 FGTQVRSIWMIGLH-AFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 ++ + + + A +T YP+E + R+RG+ ++ +GE C+ CNLCA+ Sbjct: 12 LIDLIKGLSITFKYQAPKDCQTEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCAL 71 Query: 69 ACPVGCISLQ-KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 ACP I+++ + + + + SRC+FCGLCEEACPT +++L +EM Y R Sbjct: 72 ACPENLIAMKSDRDPVTKKKVMVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMALYSR 131 Query: 128 QDLVYEKEDL 137 + +V +++ L Sbjct: 132 EGMVLDRKVL 141 >UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FHA1_SORC5 Length = 214 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 18/190 (9%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEP-----VYLPPRYRGRIVLTRDPDG 56 +K + T + + + H F + T YP++ LPPRYRG + + D Sbjct: 6 YIKSISSAANTILEGMAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDI-- 63 Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRW-YPEFFRINFSRCIFCGLCEEACP---TT 112 C C C ACP+ CI++ + + F I+ +C++CGLC EAC T Sbjct: 64 ---CTGCKRCERACPIECIAIDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTG 120 Query: 113 AIQLTPDFEMGEYKRQDLVYE--KEDL--LISGPGKYPEYNFYRMAGMAIDGKDKGEAEN 168 AI+ T +FE L + E L L P E A + +++ +N Sbjct: 121 AIRHTREFEGAAPTLDHLTFRFIPEGLVPLYKAPKDLGEVPVGEYGPHAREARERAMRDN 180 Query: 169 EAKPIDVKSL 178 A +++++ Sbjct: 181 PAALEELRAI 190 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 12/157 (7%) Query: 7 LVGFGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL 65 L F ++++ +A R T YPEE + LP YRG I L +D C+ C L Sbjct: 13 LKAFVDHLQAVGTGLKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDI-----CIGCTL 67 Query: 66 CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 CA+ CP + + K + IN+ RC+FCG C + CP A++ T + Sbjct: 68 CALICPADAMKMTTEAGK------KLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFT 121 Query: 126 KRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKD 162 R+DLV+ + + E R+ + + K Sbjct: 122 NRRDLVFRPDKFDQAYDEPPAEKVVRRVKPIIDENKG 158 >UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5 Length = 189 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 11/150 (7%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEER- 59 M + + G R+ + + T YPEE LP R L D D E+ Sbjct: 1 MLGEGIAKGLIETARNFFGSFVDKDRL-VTVQYPEERHPLPEASRVFPFLLYDGDDAEKG 59 Query: 60 --CVACNLCAVACPVGCISLQKAETKDG------RWYPEFFRINFSRCIFCGLCEEACPT 111 CV+C++C CP CI+++K+ K ++YP F I+ S C+ C +C E CP Sbjct: 60 LRCVSCHICEKECPPHCITIEKSTDKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPF 119 Query: 112 TAIQLTPDFEMGEYKR-QDLVYEKEDLLIS 140 AI++ FE+ R L++ KE L Sbjct: 120 DAIRMDTAFELSTSDRFDGLLWTKEQLAKP 149 >UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THF2_9MICO Length = 184 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 18/144 (12%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 K +L G ++ + A T YP+ LPPR RG I L EE C +C Sbjct: 7 KGILPG---ILKGLATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALL-----EENCTSC 58 Query: 64 NLCAVACPVGCISLQKAET----------KDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 LCA CP CI ++ + + R + F I+FS C++CG+C E CP A Sbjct: 59 MLCARECPDWCIYIESHKETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDA 118 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDL 137 + +P FE E DL+++K+ L Sbjct: 119 LFWSPQFEYAETSILDLLHDKDRL 142 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 15/138 (10%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++I G H T YP P+ + +RG+ E+C+AC C A Sbjct: 1 MFKLFKTIAKAGTH-----STIQYPFAPLEVCDDFRGKP-----EHDPEQCIACAACTQA 50 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP + ++ + R + I+F+RCI+CG CEE CPT AI L+ +FE+ + D Sbjct: 51 CPANALIMETDTENNLRR----WEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKAD 106 Query: 130 LVYEKEDLLISGPGKYPE 147 L YE+ + ++ + E Sbjct: 107 L-YEEANFTLAHCAECGE 123 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G + + F + T YP+E + + R+RG RC Sbjct: 1 MFGKGLLTG-------MLITLKRFFGRPNTVQYPDEKLPMTARFRG----GALTLDINRC 49 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 +AC LCA+ACP I L + + + + C++C LC EACP A+ ++ Sbjct: 50 IACGLCAMACPNQAIGLATTVDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNY 109 Query: 121 EMGEYKRQDLVYE 133 E Y RQ+L + Sbjct: 110 EAACYLRQNLDVD 122 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 15/165 (9%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + +I + A T +YP + + +RG+I + +C+AC C Sbjct: 3 VRKLLKPLKLISVAKKAGVVTVLYPYQKPLITSEFRGKISI-----DPSKCIACGACVNV 57 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINF--SRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CP ++L K E IN+ RCIFCG C E CP AI +T +FE+ + Sbjct: 58 CPPNALTLSKQEN--------IIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRI 109 Query: 128 QDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 DL + Y +M I+ E + P Sbjct: 110 DDLSSTLIHKIYECSNCGSAYITRKMKQFIINRVPVSENYIDLCP 154 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%) Query: 17 IWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 ++ + F T YP +P + +RG+ L D C+ C C +ACP + Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQ-----CIVCAACTMACPANAL 55 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 +++ R + + RCIFCG CEE CPT AI+LT DFE+ +QDL E Sbjct: 56 TMRTDPVTGDR----TWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETT 111 Query: 136 DLLISGPGKYPEYNFYRMAGMAID 159 ++ + Y+ ID Sbjct: 112 FATVACQECGQPFISYKELNYTID 135 >UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ75_9SPHI Length = 488 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 39/212 (18%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF---------------------AKRETRMYPEEPVYL 40 + G + + + + HAF R T YP E + + Sbjct: 10 YFGNIKEGVRSSLIGLKLSIKHAFEARQRRKPADSIATPAYFEQQTGRVTTQYPYEAIPV 69 Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG----------RWYPE 90 P R R+ + + C+ C+ CA CPV CI ++ R Y Sbjct: 70 PDNGRYRLF-----NEMDDCIVCDKCAKICPVDCIDIEPIRATGQIGTASDGSPIRLYAA 124 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNF 150 F I+ ++C +CGLC CPT + +T ++ E D++Y +L + + Sbjct: 125 TFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMIYHFSNLTPDQVQEKKDLFE 184 Query: 151 YRMAGMAIDGKDKGEA---ENEAKPIDVKSLL 179 M K +A E +AKP K + Sbjct: 185 QYMKEKEATKKQMAQAKGGETKAKPTVKKPVA 216 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 12/133 (9%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 M K LL G G ++ T YPE LP R + L ++C Sbjct: 1 MLGKGLLTGMG-------IVLKKMLGPNITEFYPEVMPNLPKTVRSSMGLE-----PDKC 48 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 ++C LCA+ACP I+L + ++ + + + ++ RC+FCGLC EACPT A+ +T +F Sbjct: 49 ISCTLCALACPNKVITLTSEKDENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEF 108 Query: 121 EMGEYKRQDLVYE 133 E + +DL ++ Sbjct: 109 ENSVFYPEDLYWD 121 >UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdehydrogenase i subunit i 2) (Ndh-1 subunit i 2) n=4 Tax=Hydrogenothermaceae RepID=C0QTC6_PERMH Length = 233 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 61/172 (35%), Gaps = 28/172 (16%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRI--------------------V 49 F + + H F K T +P E V PR+RG Sbjct: 23 FLDFAKGLATTIKHLFRKVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLK 82 Query: 50 LTRDPDGEERCVACNLCAVACPVGCI--------SLQKAETKDGRWYPEFFRINFSRCIF 101 + GE RC+ C C ACPV I + + G F ++ +C+F Sbjct: 83 IKPPEMGETRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMF 142 Query: 102 CGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRM 153 CGLC ACPT I T +++ Y R+ V +KE L + Sbjct: 143 CGLCTLACPTACIIHTDIYDLSSYTRRGWVLDKEKLSKIADDFVSRRREEKF 194 >UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae RepID=NUOI_CAMFF Length = 165 Score = 113 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 4/148 (2%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVY-LPPRYRGRIVLTRDPDGEER 59 + L + G R + + + + YPE+ + RYRG LT++ G+ + Sbjct: 19 IYLPFIFAGMARTFRHFFRNLKDS-SNIDFLEYPEQKPTDITNRYRGLHRLTKNEKGDLK 77 Query: 60 CVACNLCAVACPVGCISLQKAETKD-GRWYPEFFRINFSRCIFCGLCEEACPTTAIQL-T 117 CVAC++CA ACP CI + E + P F I+ C+FCGLC EACP AI++ T Sbjct: 78 CVACDMCATACPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRMDT 137 Query: 118 PDFEMGEYKRQDLVYEKEDLLISGPGKY 145 F R+ + + + L G + Sbjct: 138 GIFTKVGNTRESFLADIKTLSQREEGSF 165 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 10/155 (6%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 V +I A K T MYP P +RG I+ ++C+ C+LCA Sbjct: 30 VSGHVSAISAALRRASKKPMTLMYPTVEEEKPQLFRGFILY-----DYDKCIGCSLCAQI 84 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I + + + RCI+CGLC + CPT A+ L+ F+ K +D Sbjct: 85 CPARAIKMYRVPGDKRLR----PGYDVGRCIYCGLCTDICPTDALILSDRFDHVFEKLED 140 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 ++++ D K E R + ++ G Sbjct: 141 MIFDPIDWAQI-SKKIREEKPTRKRVRTLVDEEVG 174 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Query: 11 GTQVRSIWMIGLHAF-AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 +++I+ + F R T MYP+E LP YRG I + C+ C+LCA+ Sbjct: 7 ARHLKAIFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMI-----EYDWDSCIKCSLCAMV 61 Query: 70 CPVGCISLQ--KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CP + + K E++ + IN++RC+FCG C + CPT +++ T ++ Y Sbjct: 62 CPADAMKMYVSKEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTY 121 Query: 128 QDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 ++ +Y ++ P P Y+ AI + +G Sbjct: 122 EEQIYPPQEFSKGVPK--PVYDKEPRKVKAILDERRG 156 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 112 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%) Query: 14 VRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++S+ A TR+YPE + LP RG L C+ C CA CP Sbjct: 3 LKSLKYTLKTALTTTEVTRLYPEVMMELPANERGIHEL-----DATTCIGCGSCARVCPN 57 Query: 73 GCISLQKAE--TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 CI + + +F +I++ RC FCGLC + CP + +++ E+ + R+D+ Sbjct: 58 SCIEMVPYKYGNPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDI 117 Query: 131 VYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAK 171 VY + R+A K+ E E EAK Sbjct: 118 VYGPD----------------RIAVKKFSDKEVAELEAEAK 142 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +++I + TRMYPE+ L R+RG +L + +C+ C +CA CP Sbjct: 3 LKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQIL-----DKSKCIGCGICANTCPNA 57 Query: 74 CISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPDFE--MGEYKRQDL 130 I + KA G +F +I+ C+FCGLC + CP A+ ++ + ++K +DL Sbjct: 58 AIKIVKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYAKGLVKWKHKDL 117 Query: 131 VYEKEDLLIS 140 + E L Sbjct: 118 LITPEKLARE 127 >UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY43_CHLT3 Length = 268 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 32/180 (17%) Query: 3 LKELLVGFGTQVRSIWMIGL-------------HAFAKRETRMYPEEPVYLPPRYRGRIV 49 + +L G G + + + T YP E V P R R+ Sbjct: 12 VTTILTGLGITWKHLLNATKRKGFAGIAEDHYFNQVDGLVTLQYPSEAVPTPSFARYRLH 71 Query: 50 LTRDPDGEERCVACNLCAVACPVGCISL--------------QKAETKDGRWYPEFFRIN 95 + + C+ C+ CA ACPV CI++ ++ R + F I+ Sbjct: 72 -----NEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILGTTSDGTKKRLWIPVFDID 126 Query: 96 FSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAG 155 +C+FCGLC CPT + +TP + E+ R+ L+Y ++ + A Sbjct: 127 MGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLIYHFGNMTKEMEADKRKKLEQFEAE 186 >UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP4_9GAMM Length = 134 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 67/130 (51%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + + +G+ CV C LCA CP CI++ E + G P+ F I+ +RC++CGLCE+AC Sbjct: 1 MKTNDEGDVNCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDAC 60 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENE 169 P AI+L ++E+ + LV EDL+ + A +A DG K A+ Sbjct: 61 PADAIKLGQEYEVATTTTEALVVHLEDLIAAPRKAEEGAGTVIPASLAKDGSGKTIAQAN 120 Query: 170 AKPIDVKSLL 179 K D LL Sbjct: 121 VKGYDWWQLL 130 >UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ Length = 160 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 + G ++ I + H F+KR T YP E + YRGRI L E C+ C Sbjct: 6 QNFFEGVKNIIQPIIVGFKHIFSKRHTMKYPYEYIPPTKNYRGRIEL-----DMETCINC 60 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT--------AIQ 115 LC CP I DG+ +P I+F +C FCG C CP + Sbjct: 61 MLCEKYCPDHAIQ---TYYVDGKKFPG---IDFGKCCFCGYCVWVCPPNIRKGGEEVCLS 114 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGP 142 L + + + +L+Y + L P Sbjct: 115 LNEEHSFPSFDKAELIYPPQKLQDPPP 141 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 9/136 (6%) Query: 14 VRSIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++ + + F K TRMYP E Y+ + R R +L +RC+ C C +ACP Sbjct: 3 LKAVLLGFKYLFKKPYTRMYPYKEEAYVTSKTRARHILY-----MDRCIGCRACQLACPA 57 Query: 73 GCISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP--DFEMGEYKRQD 129 I + E F I++SRC +CGLC EACP A+ +T + + Sbjct: 58 DAIKMYHVEGDYPKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTNYTMEHLITEDKAT 117 Query: 130 LVYEKEDLLISGPGKY 145 +Y E L GKY Sbjct: 118 TLYTPEMLAKPPEGKY 133 >UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales RepID=NUOI2_AQUAE Length = 208 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRD---------------- 53 F ++ + + +A K T YP E + P R+RG Sbjct: 18 FIDFIKGLRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRY 77 Query: 54 ----PDGEERCVACNLCAVACPV-GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEA 108 G+ RCV C C ACPV ++ + +G+ F +N C +CG C +A Sbjct: 78 NILVEYGKSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDA 137 Query: 109 CPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYR 152 CP + T E Y R+D V E L G Sbjct: 138 CPVDCLYQTDIHENASYTRKDAVLTLEILEQIGRDWQRRREREP 181 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 16/153 (10%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP +P P +RG+ + C+ C CA CP I+ D Sbjct: 16 ATLEYPFKPEEAPEDFRGKPEI-----DPSICMGCGACANVCPPDAITCVD----DLERG 66 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG--PGKYP 146 ++I + RCIFCG CEEACP +AI+ + ++E+ R+DL E L GKY Sbjct: 67 LRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGKYF 126 Query: 147 EYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 +A A AE + P V LL Sbjct: 127 PVTEREVAQAAQI-----LAEAKTLPRSVLELL 154 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 7/115 (6%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + ++ + F TR YP E RG+++ E C C C ACP G I Sbjct: 1 MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFH-----PEYCEFCGECERACPTGAI 55 Query: 76 SLQKAETKDGRWYPEFF--RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 L A + Y + R + +CIFCG C EACP AI+L + Y+++ Sbjct: 56 ELDTAWDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 V+ + + T +PE L YRG L + C++C CA CP Sbjct: 2 IVKPLINVAKEVLKPPSTLEFPENRENLTDNYRGIHKL-----DMKTCISCAACARICPN 56 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + ET D + + IN RC+FC LCEE CPT + LT D+ Y R+D + Sbjct: 57 QTIDMVDTETPD-KGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIK 115 Query: 133 EKEDL 137 EDL Sbjct: 116 RPEDL 120 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 26 AKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG 85 T YP + PP YRG + C+ C C ACP ++++ Sbjct: 23 KAPVTTSYPFVDIEKPPEYRGIPRI-----DPHLCIGCGACVRACPPDALTIEWDFENGR 77 Query: 86 RWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG--PG 143 + N +RCI C C E CPT A+Q T FE+ ++DL+ + L G Sbjct: 78 KR----IVFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCG 133 Query: 144 KYPEYNFYRMAGM 156 +Y E+ ++ M Sbjct: 134 RYEEFTERQIGKM 146 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%) Query: 10 FGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 ++++ + R T YP+E + LP YRG I L +D C+ C LCA+ Sbjct: 19 VSGHLQAVGAGIKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDV-----CIGCTLCAM 73 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP + + + K +F IN+ RC+FC C + CP A++ T + R+ Sbjct: 74 VCPADAMKMVTDQGK------KFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRR 127 Query: 129 DLVYEKEDL 137 +L++ E Sbjct: 128 ELIFNPERF 136 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 22/146 (15%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVY-LPPRY-------------RGRIVLTRDPDGEE 58 +R++ H KR T YPEE + + Y +GR +L D Sbjct: 7 IIRALNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHDH---- 62 Query: 59 RCVACNLCAVACP--VGCISLQKAETKDG-RWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 C C LC++AC I++ K + +I++ +C+FCGLC +ACP A+ Sbjct: 63 -CTGCQLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALY 121 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISG 141 +T D+E+ + ++ L+Y L + Sbjct: 122 MTNDYELSSFTKEGLIYTPAQLAVKP 147 >UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Flexibacteraceae RepID=C6VZ34_DYAFD Length = 513 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 35/169 (20%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAF-----AKR---------------ETRMYPEEPVYLP 41 K + G T + + + H + K T YP+E + +P Sbjct: 4 YFKNISDGISTTLTGMRLTLRHLWNARKSRKPADIRSSSFYDQQDGIVTIQYPQETIPIP 63 Query: 42 PRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDG----------RWYPEF 91 R R+ + + C+ C+ CA CPV CI ++ + + R Y Sbjct: 64 DNGRYRLH-----NEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASDGSPIRLYAAK 118 Query: 92 FRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLIS 140 F I+ ++C +CGLC CPT + +T F+ E +D+VY +L Sbjct: 119 FDIDMAKCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYSNLTTE 167 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP EP+ + +RG+ ++C+ C C ACP ++++ Sbjct: 14 ATSSYPLEPIAVDKNFRGKP-----EQNPQQCIGCAACVNACPSNALTVETDLATG---- 64 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG-----PG 143 + N CIFCG CEE CPT AI+L+ ++E+ +K++D + + L + P Sbjct: 65 ELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPF 124 Query: 144 KYPEYNFYRMAGMAIDGKDKGEAENEA 170 + Y +A + +G + E E+ Sbjct: 125 AVQKEIDYAIALLKHNGDSRAENHRES 151 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 24/143 (16%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +++++ +G F K T YPEE +P R+R RI L+ E C+ C LC CP Sbjct: 26 IQTMYHVGKFIFKKPVTIQYPEEKGDIPERFRYRIFLS-----PESCIGCTLCQQICPNH 80 Query: 74 CISLQ------------------KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 I ++ + +NF C C CEE CPT AI Sbjct: 81 SIKMEVWDLSSQNTGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAIY 140 Query: 116 LTPDFEMGEYKRQDLVYEKEDLL 138 LT +FE R Y ++L Sbjct: 141 LTHEFETA-RTRNSFTYSPQELT 162 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 L G +++I + +R TR+ PE L R+RG L + +C+ C Sbjct: 34 WTLSGGLSMVLKNIKYALKNIPKERVTRLCPEVESPLSERFRGLQTL-----DKSKCIGC 88 Query: 64 NLCAVACPVGCISLQKAETKDGRWYPEFF-RINFSRCIFCGLCEEACPTTAIQLTPDF-- 120 +CA CP I + KA G +F +I+ C+FCGLC + CP A+ ++ Sbjct: 89 GICANTCPNSAIKIVKAPIAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYCK 148 Query: 121 EMGEYKRQDLVYEKEDLLIS 140 M ++ +DL+ E L Sbjct: 149 GMVKWAHKDLLMTPEKLARE 168 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 107 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 10/121 (8%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 + + R T YP+ LP R+RG + + C C +C Sbjct: 1 MSLPGKLLPEALKTLGKDRATVSYPKNKRTLPDRFRGAVEF-----DPDPCTGCGMCERH 55 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 C I + + + + + ++C+FCG CEE+CPT AI + DFE+ + R+ Sbjct: 56 CAADAIVVGTDDDGN-----VTWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRES 110 Query: 130 L 130 Sbjct: 111 F 111 >UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11 Tax=Chlorobiaceae RepID=A1BF37_CHLPD Length = 228 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 39/171 (22%) Query: 2 TLKELLVGFGTQVRSIWMIGLHAFAKR--------------------ETRMYPEEPVYLP 41 + + G T + + H F T YP E + P Sbjct: 4 YFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAIPTP 63 Query: 42 PRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE--------------TKDGRW 87 R R+ + + C+ C C ACP+GCI+++ + + ++ Sbjct: 64 ANGRYRL-----ENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKF 118 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 + F I+ ++C+ CGLC CPT + +P + E+ RQ+LVY +L Sbjct: 119 WLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVYHFGNLT 169 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 6/134 (4%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 WM + F K T P E V + YRG L ++CV CN C CP I + Sbjct: 23 WMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTL-----DWKKCVGCNFCGQICPARAIEM 77 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 E +I++ RC FC C + CP A+ ++ + + + E D Sbjct: 78 TWIEVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDE-ELELFDW 136 Query: 138 LISGPGKYPEYNFY 151 + P K+ E N Sbjct: 137 VPIHPDKFREINEK 150 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 22/173 (12%) Query: 17 IWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + ++ + F T +P+ EPV +P +RG++V ++C+ C LC CP G Sbjct: 7 LSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHV-----DKCIGCKLCMNVCPAGVF 61 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY--- 132 + + RC+FC C + CP A++++ +F + Y + D Sbjct: 62 EYVPE--------IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYDDNLRWL 113 Query: 133 ---EKEDLLISGPGKYPEYNF--YRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 E E+++ GK +Y + G + ++ + E P V + P Sbjct: 114 KNEEIEEMIAQKSGKTKKYRIIAEKCKGCTLCARNCPQNAIEGAPRVVHKINP 166 Score = 57.7 bits (138), Expect = 2e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 9/69 (13%) Query: 51 TRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 + E+C C LCA CP I +IN +CI CG+C C Sbjct: 130 KKYRIIAEKCKGCTLCARNCPQNAIEGAPR---------VVHKINPEKCIGCGICATICK 180 Query: 111 TTAIQLTPD 119 +AI+ + Sbjct: 181 FSAIEEYEE 189 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 9/126 (7%) Query: 16 SIWMIGLHAFAKRETRMYPE-EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 SI + K TR P + + P RG VL +C C++C CP Sbjct: 5 SISNSLKYLLRKPYTRQVPRIDKPFKTPVTRGSHVL-----DMLKCTGCSMCQQVCPANA 59 Query: 75 ISLQKAETK-DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD--FEMGEYKRQDLV 131 I + A+ F RI+ +C FCGLC E CP A+ +T +E+ + L+ Sbjct: 60 IDMVTADGDYPQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKSTLL 119 Query: 132 YEKEDL 137 + +L Sbjct: 120 RQPIEL 125 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 9/119 (7%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + ++ + +K T YP+EP + P YRGR +C C+LC++ CP Sbjct: 5 KILNLVLKNLASKPATIQYPKEPTPVEPDYRGRH-----YADLGKCTGCSLCSIECPADA 59 Query: 75 ISLQKAET----KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 I + + + I++ +C++C C CP A T ++ + + + Sbjct: 60 IKMTPIPSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 +I + T YP P+ +P +RG+ V+ E+C+ C C+ ACP + Sbjct: 4 FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVI-----DPEKCIGCTSCSNACPPQALQ 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + + RCIFC C++ CPT AI+LT +FE+ +DL Sbjct: 59 VYDEP----ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDL 108 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 13/164 (7%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVY-------LPPRYRGRIVLTRDPDGEERCVACN 64 + V+ H T YP + RYRG + E C+ C Sbjct: 2 SIVKPFK-ALRHLSKAPHTVKYPYQKHTDIEGLELPTERYRGFHS-----NNIETCIGCQ 55 Query: 65 LCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 LC+ CP I+ K E + I++ RC +CG C + CPT ++ LTP +E+ Sbjct: 56 LCSKVCPAAAITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVT 115 Query: 125 YKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAEN 168 + + + K + E E Sbjct: 116 ENIDEFKFIPTYEIREKKDKEIHMDEVLFRPEDYVPPKPKEEEK 159 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++++ + + F K T YP + + YR RI T E C+ CN+C Sbjct: 1 MAHPLKALKEVINNLFTKHSTIEYPYKKIETAETYRARIKFT-----PENCIGCNICVRN 55 Query: 70 CPVGCISLQKAETKDGR-----------WYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CP I + + +D I+ RCI+C C E+CP A+ + Sbjct: 56 CPANAIKITQINPQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYAST 115 Query: 119 DFEMGEYKRQDL 130 +FE+ + ++DL Sbjct: 116 EFELAAFDKKDL 127 >UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3 Length = 427 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 37/167 (22%) Query: 3 LKELLVGFGTQVRSIWMIGLHAF------AKR----------------ETRMYPEEPVYL 40 ++ +V + + + H F K T +YP E + + Sbjct: 8 IRLFIVSVQSMAIGLRLTLKHFFVSIGVKRKPQVGVMDADYFTHKDGIVTNLYPHESIPV 67 Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD----------GRWYPE 90 P R R+ D C+ C+LCA CPV CI ++ ++ R Y Sbjct: 68 PDNGRYRLHNEVDD-----CIVCDLCAKVCPVNCIEIEPIKSPVEIGKTSDGSTKRIYAA 122 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 F I+ ++C FCGLC CPT + +T ++ EY +++VY +L Sbjct: 123 TFDIDMAKCCFCGLCTTVCPTECLTMTKTYDFSEYDVRNMVYHFAEL 169 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 35/167 (20%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKR--------------------ETRMYPEEPVYL 40 M +K + T V+ + + H R T +P++ + + Sbjct: 2 MLIKTTINALLTAVKGLSLTVRHLIGARRARHELDITKDHYFDKQDGVATVQFPKQKMPI 61 Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD----------GRWYPE 90 P R ++ + D C+ C+LCA ACPV CI + ++ + R Y E Sbjct: 62 PEVARYQLEVEIDD-----CIVCDLCAKACPVDCIDILSIKSPEAIGKTSDGSVKRLYAE 116 Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 F I+ ++C++CGLC CPT I +T ++ K DL+Y D+ Sbjct: 117 KFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLIYGFSDM 163 >UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Proteobacteria RepID=A0L9R3_MAGSM Length = 598 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 29/170 (17%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC 60 MT++++L F + F + + P PRYRG + E+C Sbjct: 1 MTIRDVLSPF--------TAWKNLFREPVSIKDPIHR-KAAPRYRGFHK-----NDVEKC 46 Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPE--FFRINFSRCIFCGLCEEACPTTAIQLTP 118 + C C C G I + + G RI++ RC +C LC + C T+++ ++ Sbjct: 47 IGCGTCEAICQNGAIDMVENRDVPGNRSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSN 106 Query: 119 DFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAEN 168 ++ + + ++ PG P+Y G + E Sbjct: 107 AYQWVDSDPKAFMFT--------PGVDPKY-----WDNMEQGYRRPEGHR 143 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 10/117 (8%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 ++ + + F + T +PEE R RG IV + +C++C LC Sbjct: 1 MIAHLKMFGVALKYVFQRPITVRWPEERRDYGDRMRGFIV-----NDRGKCISCQLCEAV 55 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 CP I DGR YP I++ RCI CG C +ACPT +++ + E+ Sbjct: 56 CPAKAIKF--HLEADGRRYPG---IDWGRCILCGYCVDACPTGSLKYVNNTEIVWTD 107 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 33/154 (21%) Query: 1 MTLKELLVGFGTQVRSIWMIGLHAFA------------------KRETRMYPEEPVYLPP 42 M L+ L + + + H T YP E + +P Sbjct: 1 MQLRTLFHIILRLTKPLQLTWQHFVKSIKARNHTSTPIYFQQESGNITLQYPHEKLPVPS 60 Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKD----------GRWYPEFF 92 R R ++ E C+ C+ CA CPV CI ++ D R + F Sbjct: 61 RGRYKLHNAI-----EDCIVCDKCAKICPVDCIEIESIPAPDVFGITSNGMKKRIHAAKF 115 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I+ ++C FCGLC CPT + +TP+++ + Sbjct: 116 DIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 13/124 (10%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 + F+K T YP P P R RG I + E C++C +CA +CP G +++ Sbjct: 11 GTALKNLFSKPVTTSYPFAPAQYPERMRGHIEI-----DIESCISCGMCARSCPPGALTV 65 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDL 137 + I C+ CG C CP +++ P + + R Y + Sbjct: 66 D--------RAAGTWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTTP 117 Query: 138 LISG 141 L Sbjct: 118 LPKP 121 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%) Query: 15 RSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGC 74 + + H+ TR YP E + +P +RG+IV E+C+ C +C CP Sbjct: 7 KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVF-----DYEKCIGCKICVRDCPARA 61 Query: 75 ISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 I++ + K RCI+C C ++CP A+ T +FE+ + R Sbjct: 62 ITITRVADK-----VFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRTQ 111 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 102 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 11/144 (7%) Query: 5 ELLVGFGTQVRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVAC 63 L G + ++ + + R + YP+E L YRG I+L + +C++C Sbjct: 15 GLFTGVTDNLAALMIGLKYFVNPRRFSIYYPKEYPELRQGYRGFIIL-----NKAKCISC 69 Query: 64 NLCAVACPVGCISLQKA-----ETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 CA CP + + + + + + +F IN+ RCIFCG C + CPT A+ Sbjct: 70 AACARICPSAAMKMIRVPVPHPKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVN 129 Query: 119 DFEMGEYKRQDLVYEKEDLLISGP 142 ++ ++ ++ E Sbjct: 130 YHDIVYDNLAEMFWDLETFQKEPE 153 >UniRef50_B8DS07 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS07_DESVM Length = 207 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 27/158 (17%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYP--EEPVYLPPRYRGRIVLTRDPDGEER- 59 + L + V + + G T YP E +RG I L + Sbjct: 4 IFRTLADLWSLVVGLGITGKEFCKPGVTVHYPRAEVTPEAAASFRGPIELIGLDKDPAKP 63 Query: 60 -CVACNLCAVACPVGCISLQKAETKDGRWY-----------------------PEFFRIN 95 C+AC LC ACP CI++ +A T P + + Sbjct: 64 KCIACMLCVSACPSNCITVTRAPTPKPTPEELKAMAEAEARGEKPKKPAPPKAPGTWTYD 123 Query: 96 FSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 FS C CG C EACP +I + D M KR+D V++ Sbjct: 124 FSLCSLCGSCVEACPVDSIGFSHDIYMVGTKREDFVFD 161 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 11/146 (7%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + I + A R T YP P+ PPR+RGR + +C+ C CA CP Sbjct: 1 MLSKIKEALICLRAGRVTLPYPFVPLKAPPRFRGRPTI-----DGAKCIGCGACAEVCPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + A + +N+SRC +C C+E CPT A+ T DFEM R++L Sbjct: 56 RLIEVNDAAS------TRTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTV 109 Query: 133 EKEDLLISGPGKYPEYNFYRMAGMAI 158 + ++ + RM + Sbjct: 110 SVQLDMVHCETCGKAFMTKRMLDKML 135 >UniRef50_C6BS80 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=C6BS80_DESAD Length = 201 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 27/158 (17%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPP--RYRGRIVLTRDPDGEER- 59 + + + + + + + G + K T YP E V +RG + L P + Sbjct: 7 IWDDVTSLWSLIVGLKVTGKNFVDKNVTLHYPRETVTSGELEGFRGPLELIGKPKDPAKP 66 Query: 60 -CVACNLCAVACPVGCISLQKAETKDGR-----------------------WYPEFFRIN 95 C+AC +C ACP CI++ KA+ P F + Sbjct: 67 KCIACMMCVTACPSKCITVVKAKAPKPTEAELQAMKEAEERGEKVNKPKAPKEPAKFLYD 126 Query: 96 FSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYE 133 FS C CG C E CP A++ + + + R++L + Sbjct: 127 FSLCSLCGSCVENCPAKALRYSSNVYLTVTDRKELKMD 164 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 12/128 (9%) Query: 10 FGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 + +I + + R T YP E + R RG I L E+C +C +CA Sbjct: 12 IKATIDAISIAARNFVKPERITIYYPYEKLEYG-RARGWIGLLV-----EKCTSCMMCAR 65 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 CP I + A +G+ YP I++ RCI C C + CPT A+ T E+ Y + Sbjct: 66 ICPANAIKMYVAP--NGKRYPG---IDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSK 120 Query: 129 DLVYEKED 136 +++Y E Sbjct: 121 EMLYTPEM 128 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%) Query: 3 LKELLVGFGTQVRSIWMIGLHAF------AKRETR--MYPEEPVYLPPRYRGRIVLTRDP 54 L+ + + T +++ + T YPE+PV + RYRG Sbjct: 5 LRNIYLAVYTVGHGMYVTLRYWLITYQPERGTFTERFEYPEKPVPVAARYRGFHRY---- 60 Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF-FRINFSRCIFCGLCEEACPTTA 113 C+AC+ CA ACPV CI + K + + + F I++S+C+FC LC E CP Sbjct: 61 -DLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITGFAIDYSKCMFCALCVEPCPVDC 119 Query: 114 IQLTPDFEMGEYKRQDLVYEKEDL 137 I + ++ Y R + + L Sbjct: 120 IFMGATHDLSCYSRDGCIVDFSRL 143 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 11/135 (8%) Query: 4 KELLVGFGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVA 62 K L+ +R+I + A T YP E LP +RG I+ +E C++ Sbjct: 10 KNLIRSAIGHLRAISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFE-----KEECIS 64 Query: 63 CNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEM 122 C CA CP I + ++GR+YP +++++CIFC C ++CPT A++ + ++ Sbjct: 65 CFRCAHICPANAIQMYAD--QEGRYYPG---VDYAKCIFCHFCVDSCPTAALKPSKIHDV 119 Query: 123 GEYKRQDLVYEKEDL 137 + ++ E + Sbjct: 120 AFKDVESMMITPEQM 134 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R P E C+ C LC +CPV I + E ++ +C CG+C Sbjct: 176 RPRFVAAPLNAENCIGCRLCMFSCPVDAIKSKVEE------VKVTLETDYEKCTGCGICV 229 Query: 107 EACPTTAIQLTP 118 CPT ++LTP Sbjct: 230 RICPTEVLKLTP 241 Score = 38.5 bits (88), Expect = 0.099, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 12/31 (38%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKD 84 E+C C +C CP + L + + Sbjct: 216 ETDYEKCTGCGICVRICPTEVLKLTPVKGGE 246 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 15/135 (11%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + + + T YP EP +P +RG+ T E C+ C C +ACP Sbjct: 1 MMKLFDITEKY---GKATYAYPFEPYIVPENFRGQPNYTY-----ELCIGCAACGIACPS 52 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE-YKRQDLV 131 I L+ ET+D + + RCIFCG C+E CPT A++L+ FE+ + + L+ Sbjct: 53 NAIELKMNETQDR----LVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALI 108 Query: 132 Y--EKEDLLISGPGK 144 E E GK Sbjct: 109 QRGELEMQTCKCCGK 123 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 98.5 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 21/169 (12%) Query: 17 IWMIGLHAFA-KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + ++A T YP P+ LP +RG+ A P I Sbjct: 1 MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASAC-----PPNAI 55 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + E+ + IN+ RCIFCG CEE CP AI+L +FE+ +DL Sbjct: 56 QMTVDESAG----TIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESST 111 Query: 136 DLL--ISGPGK---------YPEYNFYRMAGMAIDGKDKGEAENEAKPI 173 LL + GK Y E ++G+A + D A+ P Sbjct: 112 YLLEHCAACGKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPT 160 >UniRef50_C4XJV9 Iron-sulfur binding protein n=4 Tax=Desulfovibrio RepID=C4XJV9_DESMR Length = 199 Score = 98.5 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 56/166 (33%), Gaps = 30/166 (18%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEE--RC 60 ++E G + + + G T +YP++ V YRG I L D RC Sbjct: 7 VREAATGLKSLFVGLGITGRAFAKPAVTVIYPKQEVTNLDTYRGHIELVGREDNPAMPRC 66 Query: 61 VACNLCAVACPVGCISLQ----------------------------KAETKDGRWYPEFF 92 +AC C ACP C+S+ + G P F Sbjct: 67 IACGACTRACPSQCLSVGCPVGAGSGGGDAEALELAGELIPVGTAMAPAPQKGCKVPGVF 126 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLL 138 ++S C CG C ACP +++ + R D + L Sbjct: 127 IYDYSLCSLCGQCVRACPVDSLRFSQHVYYVGRSRADFRLDLMARL 172 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 98.2 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 10/130 (7%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 + + + + A R T YP E +P R+RGR +C+ C CA CP Sbjct: 2 SILSKLKETAICLNAGRVTMPYPFESKPVPERFRGRP-----IWDHVKCIGCAGCANNCP 56 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I + + RC +CG C + CP AI ++ +FE G K DL Sbjct: 57 SREILINDICQE-----IRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQ 111 Query: 132 YEKEDLLISG 141 E + + Sbjct: 112 QRLELFMSTC 121 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 14/124 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 F ++++++ + H K+ TR YP PV P RGR+ +C+ C C Sbjct: 2 FKSKIKALLLSSRH---KKITRPYPFVPVTPPENLRGRL-----EVDPNKCIGCGNCVRT 53 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 CP I+++ + + + RCI+CG C ACP AI +T ++E+ ++D Sbjct: 54 CPSRLITIENYKDE------RIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKD 107 Query: 130 LVYE 133 L Sbjct: 108 LEIT 111 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 49/130 (37%), Gaps = 11/130 (8%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP + PP YRG C+ C C ACP + D Sbjct: 3 VTLKYPFVKLEAPPEYRGIP-----QIDATLCIGCGACVNACPPDAL----LRIDDYNRG 53 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG--PGKYP 146 ++ RCI C CEE CPT AI+LT FE R D V L+ G+Y Sbjct: 54 VREIVLDVGRCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGRYA 113 Query: 147 EYNFYRMAGM 156 ++ ++ Sbjct: 114 DFTERQVRKA 123 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++S+ + + R T +YP E LP +RG +V E+C+ C C +ACP Sbjct: 23 LKSLKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVY-----DIEKCIGCGACVLACPNN 77 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA--IQLTPDFEMGEYKRQ 128 C+ + + + + C+FCGLC +ACP A ++ + + K++ Sbjct: 78 CLYRRPGPKTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKK 134 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 96.2 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T +P + P R+RG++ + +CV C +C C G I Sbjct: 5 LKILARNVAQGPSTDPFPFAETHTPSRFRGKVTM-----DPAKCVGCAICRHVCAGGAIR 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 ++ E + G F + + C CGLC CPT AI +T D+ + + + + Sbjct: 60 IEPREDRSG----YDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHLQERKYDWAEHH 115 Query: 137 LLI 139 + Sbjct: 116 FVP 118 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 96.2 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 13/122 (10%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 + + F T YP E P RGRI + C+ C LCA CP Sbjct: 2 SFFTMTKTLIKSIFHGPYTVRYPLEKKEPFPASRGRIEINIQD-----CIFCGLCARRCP 56 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 G I+++K E+ + IN RCI CG C E CP +++ + ++ + V Sbjct: 57 TGAINVEKPES--------RWSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDV 108 Query: 132 YE 133 Y+ Sbjct: 109 YQ 110 >UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK Length = 147 Score = 95.5 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 15/128 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + ++ + F+ TR YP+E P RG IV T E C+ C C CPVG Sbjct: 1 MKMLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTV-----EECMTCRRCERTCPVG 55 Query: 74 CISLQKAETKD----------GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 I ++ + G R + +CI+CGLC E CP I Sbjct: 56 AIKVEIGPRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSP 115 Query: 124 EYKRQDLV 131 ++++ V Sbjct: 116 ATRKEEKV 123 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 95.1 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 12/119 (10%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP EP + +RG+ C+ C C VACP IS++ + Sbjct: 13 VTSKYPYEPYIVEEHFRGKPTYHYT-----NCIGCAACGVACPSNAISVKWEDG----KK 63 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE-YKRQDLVY--EKEDLLISGPGK 144 +R N RCIFCG C+E CPT AI+L+ D+E+ + + L+ E E L S GK Sbjct: 64 FIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVCGK 122 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 13/124 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + + K TR YP E RG I + E+C+ C +C CP Sbjct: 1 MLSMLKNVVYNLTHKPATRRYPFEKREPFEGTRGHI-----ENDIEKCILCGICQRVCPS 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 CI + + E ++ CI CG C +ACPT ++ + ++ +++ +V Sbjct: 56 NCIQVDRKEG--------TWKFEPFACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQ 107 Query: 133 EKED 136 +KE Sbjct: 108 KKET 111 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 11/116 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + T YP P ++P + RG++ + C AC C CP G I Sbjct: 5 LKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLK-----VDAKACTACGTCEEVCPSGAIH 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 + K E ++ C FCG CE CPT AI+LT DF + + + Sbjct: 60 ITKNEN------VYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKF 109 >UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX5_METLZ Length = 124 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 13/112 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 ++ + I F K T +P P+ RG +V +C +C +C CP Sbjct: 1 MKMLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVF-----DPSKCTSCMMCMKRCPSQ 55 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 I++Q+AE + + ++ RC+ CG C + C + + ++ Sbjct: 56 AITVQRAE--------KIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSAT 99 >UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ Length = 166 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%) Query: 10 FGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 + ++ + R T YP E ++ R+RG + + E+C++C CA Sbjct: 13 VAGHLNALAVGVKEFVKPTRFTIQYPRERRWVIDRFRGFM-----INDVEKCISCFQCAW 67 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 ACPV I + +A +G++YP I + +CI C C +ACP ++Q T + + Sbjct: 68 ACPVNAIFMYRAP--NGKYYPG---IRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLE 122 Query: 129 DLVYEKEDL 137 V++ ED+ Sbjct: 123 STVFKPEDM 131 >UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8 Length = 127 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 50/119 (42%), Gaps = 13/119 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + F+K TR+YP+E RG + + ++C+ C +C CP Sbjct: 1 MFGMLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEI-----DKCIFCGICQRKCPA 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I++ + +++N +C+ C +C E+CP + F + ++ + Sbjct: 56 NAITVD--------RNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKEFYI 106 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 93.2 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 24/163 (14%) Query: 26 AKRETRMYPEEPVY-LPPRYRGRIVLTRDPDGEERCV-ACNLCAVACPVGCISLQKAE-- 81 RET +P P LP R+ G + +C C CA CP I++ ++ Sbjct: 13 RGRETMAFPNGPAPALPDRHGGALR-----VDASKCADGCAACAEVCPTQAITVADSKVA 67 Query: 82 ----------TKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 + ++ RC+FC C + CP AI T D M +R+DLV Sbjct: 68 PPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRREDLV 127 Query: 132 Y-----EKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENE 169 E+ L + K + + + G E + Sbjct: 128 LGAPGQEEVRLAAALDEKLRKMFGRSLRLRQVSAGGSGAEEAD 170 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 50/155 (32%), Gaps = 18/155 (11%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + F T YP +P P RG IV E+C+ C C ACP G I + Sbjct: 13 NLFKPPVTSSYPLQPRTPLPIDRGHIVNQW-----EKCILCGACERACPSGAIRID---- 63 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISG- 141 + IN C+ CG C E CP + + + ++ ++V+ Sbjct: 64 ----RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKSEIVHTPPPPKPRRG 119 Query: 142 ----PGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 P E I E E P Sbjct: 120 PAARPPAEKEIKAEENIREEISMDAAAENAEEVLP 154 Score = 58.5 bits (140), Expect = 9e-08, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 13/118 (11%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 + +CV C +C C G + + + I+ + C+ CG+C E CP + Sbjct: 196 NDVSKCVLCGMCLRGCVGGALDID--------RKRRTWTIDPAACVQCGVCVEHCPKQCL 247 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKP 172 L + E + P + +A A ++K E + +P Sbjct: 248 SLNEAYTFTADGDS-----PEPVTFHLPERTRPALRTAVADRADAEEEKREEAVKTEP 300 Score = 54.6 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 8/93 (8%) Query: 34 PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR 93 P+E + R + CV C CP + + + Sbjct: 301 PKETLSGKETERKETEKIPVINDVSECVLCGKYTDGCPGSALEID--------RKNRTWT 352 Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 I+ + C+ C +C E CP + + ++ +G Sbjct: 353 IDPAACVQCDICVENCPKQCLSMNKEYVLGADD 385 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 92.8 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 11/141 (7%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP E + +RG I+ ++C++C C+ CP I +++A K Sbjct: 40 MTVFYPRERKKMSDNFRGFILF-----DPDKCISCFNCSFVCPANAIRMKEAPNKR---- 90 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEY 148 + I++ RCIFC C ++C A++ T ++ ++ + + +I P E Sbjct: 91 -YYPTIDYGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEM-FTPTEEMIELPEIIRED 148 Query: 149 NFYRMAGMAIDGKDKGEAENE 169 Y + D + E Sbjct: 149 KKYVEYVIEEDDLHLKRTKGE 169 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 10/78 (12%) Query: 32 MYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEF 91 Y V P +I + C+ C +C C G IS Sbjct: 170 DYLFVEVPPPI----QIPMVSQCIDRASCIGCRVCEEMCESGAIS------SSAENGMLR 219 Query: 92 FRINFSRCIFCGLCEEAC 109 +I+ +C CGLC + C Sbjct: 220 MKIDTDKCTGCGLCVKEC 237 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 92.8 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 13/132 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + + F T YP ++P RG+ C+AC +C C G I Sbjct: 5 LKIALRNLFKSPTTDPYPFGETFVPKGLRGK-----AKYNAGACIACRMCEHVCAGGAIQ 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 +++ K G F + + C FCGLCE CPT AI+LT D+ + Y ++ Sbjct: 60 IREVADKSG----LEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKG 115 Query: 137 LL----ISGPGK 144 + +G G Sbjct: 116 FIKYVNCAGCGT 127 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 27/156 (17%) Query: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 + T YP EP P ++ G + +C C C ACP G I+ Sbjct: 9 YLKKGVVTSKYPAEPFRAPEKFLGMP-----AIDKSKCDRCGKCLAACPSGAIN------ 57 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGP 142 + F I+ RCIFC C + C +AI++T ++E+ + D + Sbjct: 58 -------DNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPD-------FDVESS 101 Query: 143 GKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSL 178 G+ E + G ++ ++ ++V SL Sbjct: 102 GRELEKKIKKAFGRSLAIREVDAGSCNGCEVEVNSL 137 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%) Query: 3 LKELLVGFGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCV 61 +K + +I+ T YP+E + RG I + C+ Sbjct: 4 VKRSFSKLKGHINAIFEAVKEVVRPSTITVQYPKEIRFY-ENIRGYIQVEAIS-----CL 57 Query: 62 ACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 C CA CP I + + +GR+YP I+F +CIFC C + CPT A++ T + Sbjct: 58 GCARCARICPANAIIM---KNVNGRYYP---TIDFGKCIFCHFCIDVCPTGALRNTTVHD 111 Query: 122 MG 123 + Sbjct: 112 LA 113 >UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSE2_METMJ Length = 137 Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 48/148 (32%), Gaps = 13/148 (8%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + + TR YP P RG IV C +C+LC CP Sbjct: 3 IFQMTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVF-----DPATCRSCSLCVKRCPC 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I L + + I+ RCI CG C E CP ++ + + + Y Sbjct: 58 EAIRLD--------KEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERY 109 Query: 133 EKEDLLISGPGKYPEYNFYRMAGMAIDG 160 + P K P + G+ Sbjct: 110 TITYVKPERPAKKPAEESTKEEGVGESA 137 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 13/110 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + M F K ET +YP E +G I D C+ C +C CP Sbjct: 4 FKLGKMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDE-----CILCGMCQRVCPSD 58 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMG 123 I ++ + I+ RC+ C C ACPT+++ + P+++ Sbjct: 59 AIVVE--------KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQKP 100 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 10/146 (6%) Query: 14 VRSIWMIGLHAFAKR-ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++++ + T YP P P RG+ E+C+AC CAVACP Sbjct: 1 MKAMLKTLRNILKTGDATIKYPFAPYDTVPYMRGKP-----EHDLEKCIACAACAVACPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I + D + I++ RCIFCG CEE CP AI+LT +FE+ + DL+ Sbjct: 56 NAIQM----PTDLSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIE 111 Query: 133 EKEDLLISGPGKYPEYNFYRMAGMAI 158 + L + + A+ Sbjct: 112 DCTYTLQKCSKCGQYFAPRKEVDYAV 137 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 89.3 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 8/98 (8%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + +K ET YP P P YRG I+ EE C+ C+ C CP Sbjct: 1 MIQMFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILY-----NEELCIFCDKCENICPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACP 110 G I + + + G+ + N CI+CG C +ACP Sbjct: 56 GAIKFEVVDIESGKK---QYNYNPYLCIYCGACVDACP 90 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 88.9 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 11/119 (9%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + +I K T YP + L PRY GR L C C C ACP Sbjct: 1 MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSL-----IPVDCGDCRACYAACPTAA- 54 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 L E G ++ RC FCG C ACP AI T + M ++R+DL+ Sbjct: 55 -LLPTEGVPGS----TPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDLLIVP 108 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 88.1 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 15/133 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T P P YRG++ E CV C +C CP G I Sbjct: 4 LSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTF-----DETACVGCKMCEHVCPGGAIR 58 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 ++ F I + C+ CGLC C T AI+L+ D+ + + + Sbjct: 59 FEERPEG------LRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQA 112 Query: 137 LL----ISGPGKY 145 L+ SG G Sbjct: 113 LVAYAACSGCGTK 125 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 13/113 (11%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 + ++ K TR YP P YRG + + + C+ C CA CP CI + Sbjct: 6 TVIMNLLRKPATRQYPFTVRDPFPNYRGELYI-----DIDGCIFCGTCARKCPSQCIEVD 60 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 K + + + C++CG+C + CPT + + ++ +V Sbjct: 61 KEQG--------LWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 13/112 (11%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + + + F TR+YP + +G + L ++C C +C + CP CI Sbjct: 3 MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKL-----DVDKCTFCTVCQIKCPSQCI 57 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 + +RI+ C++CG+C + CPT+ ++ + Y + Sbjct: 58 QVD--------RKERQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSK 101 >UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=B8J2C0_DESDA Length = 192 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 15/162 (9%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + ++ + T +P + P R RGR + C+ C +C +C G I Sbjct: 5 LKVLFRNLLEGPSTDPFPLGETFTPERLRGR-----AVVDPDLCMGCGICRHSCAAGAIH 59 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 + + G I + C C C CPT A+ ++ D+ + + ++ Sbjct: 60 IGQLPDSSGF----TITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQH 115 Query: 137 LLISGPGKYPEYNFYRMAGM------AIDGKDKGEAENEAKP 172 + P + A + + E P Sbjct: 116 TIKYEPCAQCGELMRPIPKALAEKLYAWNDEIDPELTRRLCP 157 >UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA6_9ACTN Length = 157 Score = 85.8 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 11/108 (10%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 M F K T YP E V P + + C+ C +C ACPVG I++ Sbjct: 1 MTLRSLFGKPATVQYPAEQV---PAMSYEHMRGHVECDMDTCILCGMCQRACPVGAIAVD 57 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 + I+ RCI C C CP + + + Sbjct: 58 --------RKGGTWSIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 85.8 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 13/112 (11%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + + + K TR+YP + +RGR+V E C+ C C + CP CI Sbjct: 3 MLSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLVNKI-----EDCIFCKSCQIKCPSQCI 57 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 ++ + + C++C +C +ACPT + + ++ Sbjct: 58 TVDP--------KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 85.4 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 12/107 (11%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRY-RGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + T Y +L + RG +L ++C+ C+LCA +CP G I Sbjct: 11 LKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLL-----DRDKCLGCSLCARSCPSGAI 62 Query: 76 SLQKAETK---DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 ++ K + N+ +CI+CG+C E CP AI + Sbjct: 63 TMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVKK 109 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 85.4 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 17 IWMIGLHAFA-KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 ++ + T YP P + R RGR + + R A CP G I Sbjct: 1 MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPA-----AAICPTGAI 55 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 + + ++ +CIFCGLC + AI++T E+ R+ L Sbjct: 56 NCRDEAG------VRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERL 102 >UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T2_UNCMA Length = 221 Score = 85.4 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 19/165 (11%) Query: 10 FGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVA 69 + + + + F K T + +L YR +E+C C C Sbjct: 2 MKGKFGAFTGLIANLFKKPVTVDV--DYGFLAETYRAMPR-----RDDEKCTGCGACFER 54 Query: 70 CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 C G + + + ++ + CIFCG C +ACP A+ LT + + E K Sbjct: 55 CSSGATKITDKDGQ------RTVTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAA- 107 Query: 130 LVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 +E+ L + GK + AGM A +P Sbjct: 108 ----REEALRNA-GKADDVRAQVEAGMPGSMDRVNLAHYGGEPAP 147 >UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N627_SLAHD Length = 300 Score = 85.1 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 12/103 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + M F ET +YP RG I D C+ C +C CP Sbjct: 4 FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQD----CILCGICMKKCPAN 59 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 I + K E + I+ RCI C C ACP + + Sbjct: 60 AIVVSKPE--------RTWTIDPFRCIRCNECAIACPKQCLSM 94 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 46/143 (32%), Gaps = 33/143 (23%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEE----------------------PVYLPPRYRGRIVL 50 + I + K T ++P PV P RG+++ Sbjct: 1 MFPMLKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLY 60 Query: 51 TRDPDGEERCVACNLCAVACPVGCISLQ------KAETKDGRWYPEFFRINFSRCIFCGL 104 C C LC CP I + +D + RI CIFCG Sbjct: 61 -----DRNLCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQ 115 Query: 105 CEEACPTTAIQLTPDFEMGEYKR 127 C + CP AI +PDF + R Sbjct: 116 CIDICPKGAISQSPDFLLATEDR 138 >UniRef50_Q9MES3 NADH gehydrogenase 8 subunit (Fragment) n=2 Tax=Wallaceina RepID=Q9MES3_9TRYP Length = 102 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 43/89 (48%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T + P E + RG L G ERC+AC LC CP I ++ + G + Sbjct: 1 ITIVLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCEYICPSLAIDVRVLRSLLGFRF 60 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E F +++ RCI+CG C CPT AI + Sbjct: 61 SEIFTLSYRRCIYCGFCMHVCPTDAITHS 89 >UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Q6_DESAP Length = 126 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 42/120 (35%), Gaps = 9/120 (7%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 I I + TR YP E P RGR+ + C C LC CP I Sbjct: 4 MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFL-----TCGYCGLCERVCPSQAI 58 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKE 135 + D + CI+CG C E C A+Q+ + ++ L E E Sbjct: 59 K----KIGDKKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTLGREGE 114 >UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBL9_9ACTN Length = 113 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 + + + T YP+E + P R RG IV + + C+ C +CA CP Sbjct: 2 SLLTFAKTALGSMVKQPVTVCYPQEKLAAPERLRGHIV-----NDMDVCICCGMCARRCP 56 Query: 72 VGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 G +++ + I+ C+ CG C E+CP + + + V Sbjct: 57 AGALAVD--------RKGGTWSIDPYACVVCGECIESCPKHCLTMDTARTPVAADKTPTV 108 Query: 132 YEK 134 K Sbjct: 109 ETK 111 >UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V7_GEOUR Length = 124 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 14/128 (10%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + T MYP+ RGRI + +RC+ C +C CP Sbjct: 3 IFTMTKTVTKNLVTGPATLMYPQRERIFTAITRGRI-----ENAIDRCIFCGMCGRRCPT 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 I++ + ++I+ +C C LC E CP + + +RQ + Sbjct: 58 YAITVT--------KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQ-MGI 108 Query: 133 EKEDLLIS 140 +KE + +S Sbjct: 109 QKESITVS 116 >UniRef50_D2BHV2 Hydrogenase, EchF subunit n=5 Tax=Dehalococcoides RepID=D2BHV2_DEHSV Length = 114 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 13/109 (11%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 I + + F+ TR YP E RG I RC CN CA CP I Sbjct: 4 MIGTVLKNLFSTPPTRRYPYEKRESFADSRGNIT-----WDAGRCDMCNDCARVCPAHAI 58 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGE 124 +L+ + + +CI+CG C E C AI P + + Sbjct: 59 TLKPEK--------HIIEYDPLKCIYCGTCTETCLQHAIIQHPLYAAPQ 99 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 10/99 (10%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 + + +P+EPV +PP++RG+ + E C C C CP G I+ Sbjct: 7 FGKLMDTLVGGPVVKPFPKEPVKVPPKWRGKPLY-----DAEDCTGCRQCERVCPPGAIT 61 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 ++ + + ++I++ CI+C C +ACPTTA+ Sbjct: 62 IEDKKGE-----FFHYKIDYGVCIYCWYCIDACPTTALT 95 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 13/118 (11%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + + F++ T MYP +P RG + + E+C+AC C CP Sbjct: 4 FENTKTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIV-----PEKCIACRTCQRKCPTQ 58 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 I + E + ++I+ RCI C C E CPT + + + R ++ Sbjct: 59 AIIVDVKE--------KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTARGGIM 108 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 13/104 (12%) Query: 16 SIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCI 75 + ++ + K TR+YP E ++GRIV E C+ C LC CP I Sbjct: 3 MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVF-----DPENCILCGLCQKKCPPDAI 57 Query: 76 SLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 ++ KA+ + + +N RCI C C CP + ++ + Sbjct: 58 TVTKAD--------KTWELNLFRCIMCTECVNGCPKGCLSISNE 93 >UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE Length = 125 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 16/118 (13%) Query: 9 GFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 G T +++ K T YP P RG + + + C C LC+ Sbjct: 2 GLFTFAKTVTATL---LKKPATLNYPARPAKKSDLSRGHLTI-----DVDSCKWCGLCSR 53 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 CP IS+ + + I+ RC+ C C E CP + + + + Sbjct: 54 RCPTQAISVD--------RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTYLPPVTE 103 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 15/106 (14%) Query: 37 PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAE--------TKDGRWY 88 PV PP +RG++ D CV C LCA CP I L + + Sbjct: 45 PVATPPGFRGKLEYDIDE-----CVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAA 99 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR--QDLVY 132 P +I SRC+FCG C + CP ++++ +F + + +DL+ Sbjct: 100 PLKIKIYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDKLAEDLII 145 >UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP Length = 104 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 13/110 (11%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 M A +K T YP EP P RG++ C C +CA CP I + Sbjct: 1 MALQWAVSKPVTCRYPFEPRVPVPGSRGQLEF-----DPTACTYCTVCAKKCPTRAIVV- 54 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQ 128 + + + I+ CI CG C E+CP ++LT D + Sbjct: 55 -------KRAAKHWTIDRLLCISCGYCVESCPKHCLELTTDHGTPALTKD 97 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 83.5 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 13/108 (12%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 + + T YP +P + P RG +V+ D C+ C LC + CP I + Sbjct: 9 TVLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDD-----CIFCGLCKMHCPADAIEV- 62 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK 126 +R+N +C+ CG C CP + + + Sbjct: 63 -------SKPDRTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103 >UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT Length = 202 Score = 83.5 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +R I + F+KR T +P E YRG+ + E+CV C C CP Sbjct: 6 IREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLF-----NPEKCVGCGACVQVCPAK 60 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 I + + + ++ CI+CG C+E C Sbjct: 61 AIDMVDDLVE----KVRVLTVKYTDCIYCGQCQEKC 92 >UniRef50_P30826 NADH-ubiquinone oxidoreductase subunit 8 n=3 Tax=Trypanosomatidae RepID=NDUS8_TRYBB Length = 145 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%) Query: 24 AFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK 83 F T P E + RG L G ERC+AC LC + CP + ++ + Sbjct: 17 CFVCCVTICLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLCDLICPSLALDVRVGWSF 76 Query: 84 DGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 G + ++F +++ RCI+CG C CPT AI + Sbjct: 77 GGHRFADWFTLSYRRCIYCGFCMHVCPTDAITHS 110 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 83.1 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 20/150 (13%) Query: 30 TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP 89 T +P + + LP YRGR VL +D E+ A CP G ++L Sbjct: 15 TVEFPSDKIQLPEAYRGRPVLNQDAADED----VQKVASICPTGAVNLNDR--------- 61 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYN 149 ++ +C+FCG C+ I T D+ M KR+DL+ K+ L P + Sbjct: 62 ---TLDLGKCLFCGKCQ-FIKQNFIIFTRDYRMFALKREDLII-KDTL--KEPDTSSLKS 114 Query: 150 FYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 ++ G ++ ++ A D+ L Sbjct: 115 IKKLFGKSVYLREVCAGGCNACDADINVLN 144 >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 12/140 (8%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + I A T YP P+ + P +RG+ L AC A A Sbjct: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANA--- 54 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY 132 +++Q + ++ R +++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 55 --LTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 Query: 133 EKEDLLISGPGKYPEYNFYR 152 L + + Sbjct: 109 RATFHLQRCSRCERPFAPQK 128 >UniRef50_A1RRC0 Pyruvate/ketoisovalerate oxidoreductase, gamma subunit n=5 Tax=Thermoproteaceae RepID=A1RRC0_PYRIL Length = 312 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYP---EFFRINFSRCIFC 102 G + + +C+ C C + CP I E R + ++ C C Sbjct: 235 GGWRIEKPIIDHSKCIMCRKCWLYCPDDAIIEAWREAPGPRGRVFRTKVIDFDYQYCKGC 294 Query: 103 GLCEEACPTTAIQLTPD 119 G+C E CPT AIQ+ + Sbjct: 295 GICAEVCPTGAIQMVRE 311 >UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR Length = 143 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 14/117 (11%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 + + T MYP+ RGRI + +RC+ C +C CP Sbjct: 3 IFTMTKTVTKNLVTGPATLMYPQRERIFTAITRGRI-----ENAIDRCIFCGMCGRRCPT 57 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQD 129 I + + ++I+ +C C LC E CP + T + E R+ Sbjct: 58 YAIVVT--------KESKAWQIDRLKCCTCNLCVEVCPVKCLS-TDNHGKKEIDREQ 105 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 13/103 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 + M F K ET MYP E RG + + ++CV C++C CP Sbjct: 4 FKLGKMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVE-----PQKCVLCSICQRVCPTD 58 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 I + + IN+ C+ CG C ACP A+ + Sbjct: 59 SIVVD--------KKGASWTINWFSCVICGECVRACPHDALDM 93 >UniRef50_C5S5M7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5M7_CHRVI Length = 139 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 13/119 (10%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 ++ A AK TR+YP E R RG I + C C +CA CP I + Sbjct: 12 SLVTRSALAKPATRLYPAERRTPYARTRGHIEFRI-----DTCNFCTICAHKCPTQAIQV 66 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKED 136 + + I+ SRCI C +C E C I L+P ++ L + +E Sbjct: 67 --------SKLDKTWAIDHSRCILCSICVEDCREGCITLSPLPCPPMRAKEVLTFRQEH 117 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 65/206 (31%), Gaps = 57/206 (27%) Query: 20 IGLHAFAKRETRMYP----------------------EEPVYLPPRYRGRIVLTRDPDGE 57 I H F K T YP EPV R+RG++ Sbjct: 9 ILRHLFKKAFTNPYPVSHMPDDLTGVLEAASKGEIDLNEPVETWGRFRGKVGY-----DR 63 Query: 58 ERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 E+C+ C +C CP I + P+ ++ RC FC C + CP A+ +T Sbjct: 64 EKCIGCGMCMKVCPANAIERAPED-------PKKIIVHNDRCCFCAQCNDICPVDALTMT 116 Query: 118 PDFEMGEYKRQDLV-----------YEKEDLLISG------------PGKYPEYNFYRMA 154 DF + Y+R+ V ++ E G P K Sbjct: 117 CDFAISTYERKSNVTLDTGKADRKPFQSEWTYRKGEVPDEVEDPKAQPKKVYRVREEDCV 176 Query: 155 GMAIDGKDKGEAENEAKPIDVKSLLP 180 G I K E K + + P Sbjct: 177 GCTICAKACPVGAIEGKVKEKHVIDP 202 Score = 63.1 bits (152), Expect = 4e-09, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 EE CV C +CA ACPVG I E I+ +C+ CG+C CP AI+ Sbjct: 172 EEDCVGCTICAKACPVGAIE---------GKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 9/104 (8%) Query: 10 FGTQVRSIWMIGLHAFAK-RETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 + + + F + ++ P RYRG + E C+ C+ C Sbjct: 3 LFDIAKKVLRVSKALFTESPAKVDVRYTAMHSPARYRGEHRI-----DYETCIGCDSCNK 57 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTT 112 CP I+++ K P +N S CIFCGLCE+ CPT Sbjct: 58 ICPTHAITMKHLPFKKQNIVP---EVNLSVCIFCGLCEDVCPTK 98 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 4/77 (5%) Query: 87 WYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYP 146 Y RI++ CI C C + CPT AI + +K+Q++V E + G Sbjct: 37 RYRGEHRIDYETCIGCDSCNKICPTHAITMKH----LPFKKQNIVPEVNLSVCIFCGLCE 92 Query: 147 EYNFYRMAGMAIDGKDK 163 + + + + Sbjct: 93 DVCPTKPEKSIVLSGGR 109 >UniRef50_A6GD17 Carbamoyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD17_9DELT Length = 1175 Score = 82.0 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 30/140 (21%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 E RCV C CP G +S + ++ R P I+ S C+ C LC E C A Sbjct: 514 WVDESRCVGSGDCVRICPTGAVSFAEPSSEGARRLP---VIDASACVRCQLCVERCEVEA 570 Query: 114 IQ-------------LTPD-FEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAID 159 ++ L + + E +++ E +L PG+ D Sbjct: 571 LRPILDTDGSVGGKVLVREALTLAEARKRQRPRALEGVLAEPPGRL-------------D 617 Query: 160 GKDKGEAENEAKPIDVKSLL 179 + +G+A AKP V L Sbjct: 618 ARKRGDASVSAKPTVVLGLA 637 >UniRef50_C6WN89 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WN89_ACTMD Length = 173 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 39 YLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKA---------ETKDGRWYP 89 LPPR RG I L E C C +CA CP CI + R Sbjct: 3 DLPPRTRGVIALL-----EANCTVCMICARECPDWCIHIDSHTEVEQQPGSARPRARNVL 57 Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEY 125 + F I++ +C++CG+C EACP A+ PDF Sbjct: 58 DRFAIDYGQCLYCGICVEACPFDALHWAPDFSYPGT 93 Score = 38.8 bits (89), Expect = 0.092, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPE 90 E R R R VL R +C+ C +C ACP + + G P+ Sbjct: 43 EQQPGSARPRARNVLDRFAIDYGQCLYCGICVEACPFDALHWAPDFSYPGTGTPD 97 >UniRef50_A0LGG6 Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGG6_SYNFM Length = 1139 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 50/152 (32%), Gaps = 20/152 (13%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP--------VGCISLQKAETKDGRW 87 EP R R L ERC C C CP G + + Sbjct: 98 EPGKFVATLRYRPSL----IDPERCNGCGECTRVCPVEVPDEFNAGLATRKAVYLPVPHN 153 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 P + I+ C CG C+ ACPT AI L + +R + +D L+ + Sbjct: 154 LPNSYVIDTDACNHCGACQNACPTGAIDLNLE-----ARRSFRILVVDDELVV---RDSI 205 Query: 148 YNFYRMAGMAIDGKDKGEAENEAKPIDVKSLL 179 + AG A+D G E LL Sbjct: 206 KEWLDEAGFAVDMAASGAEAVEMLGRQSYGLL 237 Score = 49.6 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 8/54 (14%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 C C C VACP + E ++ C CG C ACP A Sbjct: 1074 CSLCERCVVACPFHA--------RWYDEEEERIVVDEFVCQGCGACSAACPNGA 1119 >UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA Length = 150 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 13/115 (11%) Query: 13 QVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV 72 ++ + I +AF+ T YP P P R + +C+ C LC +CP Sbjct: 1 MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTF-----DGTKCILCGLCQRSCPP 55 Query: 73 GCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 CI + K + + ++CI CG C CPT AI + +R Sbjct: 56 ECIIIHKEKEE--------IEYLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRER 102 >UniRef50_B8FNM3 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNM3_DESAA Length = 387 Score = 80.4 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 18/98 (18%) Query: 18 WMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL 77 I + T R+R + + R G+E+C C C CP G IS Sbjct: 296 GTILSNMVRWPIT----------SKRFR-NLFIDRPVPGQEKCTLCYQCMKICPAGAIS- 343 Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 + G P ++++CI C C E CP AI+ Sbjct: 344 ---KAGSGGKKP---TYDYNKCIRCYCCMEVCPEAAIE 375 >UniRef50_B4DYI3 cDNA FLJ57061, highly similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (EC 1.6.5.3) n=3 Tax=Eutheria RepID=B4DYI3_HUMAN Length = 171 Score = 80.4 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 30/62 (48%) Query: 12 TQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACP 71 R + M + F + T YP E L PR RG L R P GEERC+AC LC CP Sbjct: 63 ELFRGLGMTLSYLFREPATINYPFEKGPLSPRLRGEHALRRYPSGEERCIACKLCEAICP 122 Query: 72 VG 73 Sbjct: 123 AQ 124 >UniRef50_C1TQG7 Uncharacterized conserved protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQG7_9BACT Length = 372 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%) Query: 35 EEPVYLPP------------RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 E V LPP R+ ++ R +RC+ C C CP I+++ Sbjct: 275 FERVELPPPDSLRLLPSWMDRFGRELLAARPEQNRKRCILCGRCVEICPADAITMRDR-- 332 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 ++ +CI C C E CP AI+L + Sbjct: 333 --------RLVFDYEKCIRCYCCHEMCPANAIRLKQN 361 Score = 46.2 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 18/33 (54%) Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKR 127 N RCI CG C E CP AI + + +Y++ Sbjct: 308 NRKRCILCGRCVEICPADAITMRDRRLVFDYEK 340 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 12/113 (10%) Query: 10 FGTQVRSIWMIGLHAFAKRE-TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 F + I + R T+ ++ ++ P +RG + D C C CA Sbjct: 2 FFNIIEKIVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDI-----CTGCEACAK 56 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT---TAIQLTP 118 CPV I ++ K + P +N CIFCGLCE+ CPT AI+L+ Sbjct: 57 ICPVDAIVMEPLPIKRPKALP---EVNLGICIFCGLCEDVCPTKPEKAIKLSG 106 >UniRef50_C8X547 Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X547_DESRD Length = 807 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 47/142 (33%), Gaps = 18/142 (12%) Query: 43 RYRGRIVLTRDPDGEERCVACNLCAVACPV--------GCISLQKAETKDGRWYPEFFRI 94 +R R+ P CVAC C+ CP G + + + R P+ + I Sbjct: 235 NFRARLSSAAQPVDPAACVACGACSAVCPEFGHSGFNEGLFARKAIDKDAPRAVPDAYTI 294 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVY----------EKEDLLISGPGK 144 C CG CEE CP AI L + E + +++ P Sbjct: 295 LDDVCTRCGACEEVCPAGAIDLKAEPEERVQDYGAVFLATGFETLDLSQEQAFHTDAPNV 354 Query: 145 YPEYNFYRMAGMAIDGKDKGEA 166 F RM I GEA Sbjct: 355 VHGMQFERMLDQGITNPQTGEA 376 Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 16/123 (13%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 E C+ C +C CP G I L + + + C CGLC ACPT A Q Sbjct: 596 NRETCIQCRMCETVCPHGAIRLTEEGMVA----------DPAFCQACGLCAAACPTHAAQ 645 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDV 175 L + + L+ + E + P P + G D E P +V Sbjct: 646 L------ANFTDRQLLDQAEVAFSALPEGEPRILALLCYWCSYCGADMAGTERRKAPSNV 699 Query: 176 KSL 178 +S+ Sbjct: 700 RSI 702 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 79.3 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 30/128 (23%) Query: 19 MIGLHAFAKRETRMYPEEPVYLP----------------------PRYRGRIVLTRDPDG 56 + F + TR +P + R+RGR+ Sbjct: 8 TVLRQFFMRCLTRPFPAMRMPDSMSGALQAAAEGKVALNPAVPRWGRFRGRLNY-----D 62 Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 +C+ C +C CP I P ++ RC FC C + CP +A+ + Sbjct: 63 RAKCIGCGMCTKVCPARAIVFDPDTEGQK---PRKVMLHGDRCCFCAQCNDVCPVSALSM 119 Query: 117 TPDFEMGE 124 T DF Sbjct: 120 TTDFAFSS 127 >UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI Length = 105 Score = 78.1 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 13/100 (13%) Query: 19 MIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 + + K+ TR YP P RG + E+C+ C CA CP CIS+ Sbjct: 9 TVVKNLINKKSTRPYPFVVREPFPDQRGEL-----YCDIEQCIFCGTCARKCPSQCISVD 63 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTP 118 K + ++ + C++CG CEE CPT + Sbjct: 64 KEQG--------IWKCDPFACVYCGTCEEVCPTHCLHHKG 95 >UniRef50_Q1PYR5 Similar to NAD(P) oxidoreductase, FAD-containing subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYR5_9BACT Length = 566 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 57 EERCVACNLCAVACPVGCISLQKAET-------KDGRWYPEFFR----INFSRCIFCGLC 105 +E+C+ C C CP CIS+ E ++ PE + I+ +CI CGLC Sbjct: 488 DEKCILCGGCIDVCPYNCISMVSRENISLPDSLRNEENIPEEWDAAMIIDEEKCIRCGLC 547 Query: 106 EEACPTTAIQLTP 118 + CPT AI + Sbjct: 548 VKRCPTRAITMKR 560 Score = 46.2 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 35 EEPVYLPPRYRGRIVLTRDP-----DGEERCVACNLCAVACPVGCISLQKAETKDG 85 E + LP R + + EE+C+ C LC CP I++++ +G Sbjct: 511 RENISLPDSLRNEENIPEEWDAAMIIDEEKCIRCGLCVKRCPTRAITMKRFAYSEG 566 Score = 43.1 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 15/102 (14%) Query: 76 SLQKAETKDGRWYPEFFRINF-SRCIFCGLCEEACPTTAIQLT------------PDFEM 122 S++ + R + I +CI CG C + CP I + + + Sbjct: 467 SMENTLKEANRCLLCHYNIFIDEKCILCGGCIDVCPYNCISMVSRENISLPDSLRNEENI 526 Query: 123 GEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 E ++ ++E G + R M +G Sbjct: 527 PEEWDAAMIIDEEK--CIRCGLCVKRCPTRAITMKRFAYSEG 566 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 10/106 (9%) Query: 29 ETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWY 88 T YP+ G +C C C ACP G + L + + Sbjct: 14 VTLQYPK-KNTKSTYITGIPEF-----DYSKCERCGKCISACPTGALVLVDKDGE----R 63 Query: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 + +N CIFC CEEAC A++L+ +FE+ + R L Sbjct: 64 EKLPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLLRATP 109 >UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS Length = 196 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 13/106 (12%) Query: 14 VRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVG 73 +++ + L+ F K T E + +R + C C C C G Sbjct: 7 LKAFGDLALNFFRKPVTVD--ESYGFTAENFRWLPR-----RNADLCTGCGACNERCSSG 59 Query: 74 CISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPD 119 SL A+ + I+ RCIFCG C + CP A++LT + Sbjct: 60 ATSLTDADGE------RTVSIDGLRCIFCGRCADVCPERALELTLE 99 >UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BKV0_HYPBU Length = 494 Score = 77.4 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 12/116 (10%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 +ERC C CA CP G + L++ + RCI CG C E CP AI Sbjct: 344 VDQERCTLCGACAKECPTGALKLREEAEGSALLFL------HDRCIACGWCREVCPEDAI 397 Query: 115 QLTPDFEMGEYKRQDLVYEKEDLLISGPG------KYPEYNFYRMAGMAIDGKDKG 164 + + E+L G + E ++ ID + Sbjct: 398 TVKRAINPAIIDSLVSLVAGEELRCIVCGNPVGPTRMVEKVVEKLLASGIDPEKMP 453 >UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYA9_SYNAS Length = 637 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%) Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEA 108 L + +E+C C CA CPV IS ++ + I+ ++CI CG+C E Sbjct: 578 ALIQYNIDKEKCTGCMACAKKCPVEAISGERKKA---------HEIDQAKCIKCGVCMET 628 Query: 109 CPTTAIQLT 117 C AI L+ Sbjct: 629 CKFDAITLS 637 Score = 41.9 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 11/48 (22%) Query: 68 VACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 CP G + I+ +C C C + CP AI Sbjct: 569 KKCPAGV-----------CKALIQYNIDKEKCTGCMACAKKCPVEAIS 605 >UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis RepID=Q5JHV8_PYRKO Length = 162 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 L E C+ C C CP G + + R +N +C C CEE C Sbjct: 19 LGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRK----ISLNIGKCTPCTRCEEVC 74 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKE--DLLISGPGKYPEYNFYRMAG 155 PT AI++ FE+ +++ V E L G G Y +Y + Sbjct: 75 PTGAIKIAT-FEVISLRKRAYVEVVELRLHLCPGCGNYADYTERSLEK 121 Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 90 EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYN 149 +I+ CI CG C CP A+Q D+ M ++ L K P Sbjct: 20 GVPQIDPELCIGCGACVNVCPAGALQAIDDY-MEGIRKISLNIGKCTPCTRCEEVCPTGA 78 Query: 150 FYRMAGMAIDGKDKGEAEN 168 I + + E Sbjct: 79 IKIATFEVISLRKRAYVEV 97 >UniRef50_D1B6M7 Glycyl-radical enzyme activating protein family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6M7_THEAS Length = 301 Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 16/113 (14%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ- 115 ERCV C CA+ACP G IS Y E R++ SRC+ CG+C +ACP A++ Sbjct: 52 PERCVGCGRCALACPAGAIS-----------YGEHLRLDRSRCVRCGMCAQACPADAMRL 100 Query: 116 ----LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKG 164 +TP + + + ++ Y++ ++ G P + K G Sbjct: 101 LGWAMTPRELLAQALKDEIFYDQSGGGVTLSGGEPLSQGEFLLESLELLKSCG 153 Score = 38.5 bits (88), Expect = 0.098, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 56 GEERCVACNLCAVACPVGCISL 77 RCV C +CA ACP + L Sbjct: 79 DRSRCVRCGMCAQACPADAMRL 100 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 20 IGLHAFAKRETRMYPEEPVYLP-PRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQ 78 R T +PE G L D E C C +CP I+L Sbjct: 5 TWFGLKKGRATTGWPESAGSDGQEGVLGLPKLNADQC-SEGAQGCTKCVTSCPSEAITLN 63 Query: 79 KAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDL 130 E ++ ++++RC+ C LC E CP+ A + D+ R DL Sbjct: 64 VTEDQEP-----HIDLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADL 110 >UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA Length = 192 Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 57/156 (36%), Gaps = 18/156 (11%) Query: 35 EEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRI 94 E + PPR+R +RC+ C CA ACPV + E + Sbjct: 25 REIMQRPPRFR-----DFPDVDLDRCILCGACADACPV---EGRDGCPPAMEMSEEGPVL 76 Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYK---RQDLVYEKEDLLISGPGK----YPE 147 + RCI CGLC E CPT AI++ E E + + + L G GK P Sbjct: 77 HKERCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESACPS 136 Query: 148 YNFYRMAGMAIDGKDK--GEAENEAKPID-VKSLLP 180 +D + E E P+ L+P Sbjct: 137 DAITVEETAEVDEERCVLCEVCLEVCPVAGAIKLVP 172 >UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QF67_DESAH Length = 375 Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Query: 52 RDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 + C C +C CP+ IS++ + ++ RCI CGLC CP Sbjct: 268 QAKADPGLCTGCGICKKRCPMDAISIKN----------KRAVLDLDRCIGCGLCVSTCPE 317 Query: 112 TAIQLTPDFE 121 AI L E Sbjct: 318 KAIHLERKPE 327 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 17/45 (37%) Query: 48 IVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFF 92 I R +RC+ C LC CP I L++ P+ Sbjct: 293 IKNKRAVLDLDRCIGCGLCVSTCPEKAIHLERKPEALQPQVPKNI 337 Score = 41.5 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 15/82 (18%) Query: 95 NFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMA 154 + C CG+C++ CP AI + + + R G G Sbjct: 272 DPGLCTGCGICKKRCPMDAISIKNKRAVLDLDR-----------CIGCGLCVST----CP 316 Query: 155 GMAIDGKDKGEAENEAKPIDVK 176 AI + K EA P ++ Sbjct: 317 EKAIHLERKPEALQPQVPKNII 338 >UniRef50_B0VI75 Putative [Fe] hydrogenase (Fe-only hydrogenase) (Ferredoxin bidirectional hydrogenase), subunit alpha (HymC-like) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI75_9BACT Length = 435 Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 15/119 (12%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ- 115 + C C C CP I ++ + I+ RC+ CG C C AI Sbjct: 14 ADNCTGCTACVRVCPTEAIRVRDHKA----------NIDPYRCVDCGNCVNVCRFHAIIP 63 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPID 174 L+ E+ + L G++ E Y++A A+ + EA D Sbjct: 64 LSDPLEIIHKFKYKLAIISSSFF----GQFTEDISYQVAKQAVLNLGFDQVAEEAAVTD 118 >UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDP8_9PROT Length = 168 Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 12/111 (10%) Query: 10 FGTQVRSIWMIGLHAFAKRE-TRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV 68 I+ + R T+ +EP + P +RGR ++ E C C+ C Sbjct: 2 IFEIGEKIFRVMKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKY-----EICTGCDACNK 56 Query: 69 ACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT---TAIQL 116 CPV I ++ K P +N + CIFCGLCE+ CPT AI+L Sbjct: 57 ICPVDAIKMKPLPIKRPNKVP---EVNLAICIFCGLCEDVCPTKPEKAIKL 104 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 76.2 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 12/109 (11%) Query: 24 AFAKRETRMY-PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAET 82 A K + Y P+ P +RG+ V++ + C C CP + L+ + Sbjct: 6 AVRKSQGTQYIPDLRAATPGGFRGKPVISDAACAD----GCQACVQVCPSRAVRLEPTQ- 60 Query: 83 KDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV 131 P+ I+ RC+ CG CE CP+ + D ++ R+ L Sbjct: 61 ------PDPVHIDLGRCVLCGDCEPVCPSRKLSFNNDVKLCATSREALT 103 >UniRef50_B8FCE3 Nitroreductase n=3 Tax=Desulfobacteraceae RepID=B8FCE3_DESAA Length = 347 Score = 76.2 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 12/92 (13%) Query: 56 GEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 ++C C C ACP+ + L +++ + Y + RCI C C +CP AI Sbjct: 22 DRDKCNGCGRCVKACPIQLLELYGKKSRPNQRY------DHFRCITCQNCAASCPQNAIT 75 Query: 116 LTPDFEMGEYKRQDLVYEKEDLLISGPGKYPE 147 + D+ R D + K L GP P Sbjct: 76 IKGDY------RVDKGFWKNAHLFRGPKTMPN 101 >UniRef50_A1AL89 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=3 Tax=Deltaproteobacteria RepID=A1AL89_PELPD Length = 435 Score = 75.8 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E+C C LCA ACP+ I++ A+T+ + + I+ + C+ CG+C CP+ A +L Sbjct: 289 REKCSGCGLCAQACPINAIAMVAADTRSPKRKQD-AVIDTAICLGCGVCALKCPSGACRL 347 Query: 117 TPDFEMGEYKRQDLVYEKE 135 T R+ V E Sbjct: 348 T--------SREQRVITPE 358 Score = 46.2 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKY 145 I +C CGLC +ACP AI + ++QD V + + G G Sbjct: 287 ITREKCSGCGLCAQACPINAIAMVAADTRSPKRKQDAVID--TAICLGCGVC 336 >UniRef50_C0QEM8 HdrA4 n=5 Tax=Bacteria RepID=C0QEM8_DESAH Length = 1161 Score = 75.8 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACP-------------VGCISLQKAETKDGRW 87 P Y + RC CNLCA CP I L Sbjct: 99 PGNYHATLESPVPIVDPNRCTGCNLCAQVCPVSIDDPFNHGLSRTKAIYL-----PVPHA 153 Query: 88 YPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFE 121 P + I+ + C CG CE+ CP AI L D Sbjct: 154 VPNIYTIDMNHCTLCGECEQTCPFDAITLPADHR 187 Score = 45.4 bits (106), Expect = 9e-04, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 17/56 (30%), Gaps = 8/56 (14%) Query: 54 PDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + C C C AC G +L +I+ C CG C C Sbjct: 1091 AVKQSLCSVCGRCIDACAFGARTLDPDTN--------RIKIDPIICQGCGACASVC 1138 >UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFW9_9FIRM Length = 285 Score = 75.8 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 46 GRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLC 105 G I + + + C++C LCA CP G I+++ + I+ +CI CG C Sbjct: 151 GFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDG----------YPAIDREKCIHCGEC 200 Query: 106 EEACPTTA 113 CPT A Sbjct: 201 VAVCPTEA 208 Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 61 VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF 120 + C +C + E G + + CI CGLC + CP+ AI + + Sbjct: 133 IGVTGCPRSC------AKPQENDFGFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDGY 186 Query: 121 EMGEYKRQDLVY 132 R+ ++ Sbjct: 187 --PAIDREKCIH 196 >UniRef50_B1I324 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Clostridiales RepID=B1I324_DESAP Length = 995 Score = 75.8 bits (185), Expect = 7e-13, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 41 PPRYRGRIVLTRDPDGEERCVACNLCAVACPV---GCISL-----QKAETKDGRWYPEFF 92 P R+R + + E C C CA CPV ++ + + YP + Sbjct: 90 PGRFRVSLRHSPRGVAAEACKGCGDCAAVCPVEVPDAFNMGFGTRKAIYQPYSQAYPRAY 149 Query: 93 RINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLV-------YEKEDLLISGPGKY 145 ++ CI C LC EACPT A+ L E + + ++ ++ L G G Sbjct: 150 VLDPEHCIECTLCVEACPTGAVTLGAPEEASQVEVGAVILCPGCEVFDPSPLKNLGYGLL 209 Query: 146 PEYNFYRMAGMAIDGKDK--GEAENEAKPIDVKSLL 179 P+ + G + +S+ Sbjct: 210 PDVVTNLELERLLSAAGPFGGRLARPSDGAPPRSIA 245 Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 16/89 (17%) Query: 57 EERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116 E+C AC C CP + + I +C CG+C CP AI L Sbjct: 921 PEKCAACLGCVRVCPFNVPVIAGNISW----------IEPVQCQGCGICVAECPNAAIHL 970 Query: 117 TPDFEMGEYKRQDLVYEKEDLLISGPGKY 145 Y+++ L+ + L G G+ Sbjct: 971 ------IGYRKEQLLSQVRAGLAGGSGEV 993 >UniRef50_C7HSM1 Periplasmic [Fe] hydrogenase 1 n=3 Tax=Clostridiales RepID=C7HSM1_9FIRM Length = 489 Score = 75.8 bits (185), Expect = 7e-13, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 7/68 (10%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKD-------GRWYPEFFRINFSRCIFCGLCEE 107 +++C+ C C ACP I+ K + I+ +C+ CG C Sbjct: 132 IDQDKCIKCGKCVEACPYNAIAHTKRPCAESCGVKAIKSDKLGRAEIDDDKCVACGRCIT 191 Query: 108 ACPTTAIQ 115 ACP AI Sbjct: 192 ACPFGAIS 199 Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 12/62 (19%) Query: 60 CVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117 C AC C CP I+ + I+ +CI CG C EACP AI T Sbjct: 106 CRACIAHPCVNVCPKNAITYTSKGS----------IIDQDKCIKCGKCVEACPYNAIAHT 155 Query: 118 PD 119 Sbjct: 156 KR 157 Score = 41.9 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 16/28 (57%) Query: 49 VLTRDPDGEERCVACNLCAVACPVGCIS 76 L R +++CVAC C ACP G IS Sbjct: 172 KLGRAEIDDDKCVACGRCITACPFGAIS 199 >UniRef50_B8FJB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJB4_DESAA Length = 390 Score = 75.4 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 52 RDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 R ++CV C C CP I ++K +I+ +CI CGLC AC Sbjct: 293 RAALDSDKCVLCGKCEKRCPTQAIKIKKDA----------VKIDLGKCIGCGLCAAACKP 342 Query: 112 TAIQLTPD 119 A+ + P Sbjct: 343 GALTMAPK 350 Score = 40.8 bits (94), Expect = 0.021, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 19/49 (38%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRIN 95 +I +C+ C LCA AC G +++ ++ ++ Sbjct: 317 KIKKDAVKIDLGKCIGCGLCAAACKPGALTMAPKTKQETPPEDYSALMD 365 >UniRef50_B8DNV0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Desulfovibrionales RepID=B8DNV0_DESVM Length = 491 Score = 75.4 bits (184), Expect = 8e-13, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C LC ACPV +SL GR ++ + C+ CG C CPT A+ Sbjct: 354 CDASLCNGCGLCERACPVDAVSL--PVPPGGRKRDRRCAVDEAYCLGCGACALKCPTGAL 411 Query: 115 QLTPD 119 +L P Sbjct: 412 RLHPR 416 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 38 VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETK 83 + +PP GR R E C+ C CA+ CP G + L E K Sbjct: 376 LPVPPG--GRKRDRRCAVDEAYCLGCGACALKCPTGALRLHPRERK 419 Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 28/90 (31%), Gaps = 17/90 (18%) Query: 91 FFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNF 150 R + S C CGLCE ACP A+ L +++D ++ G G Sbjct: 351 IARCDASLCNGCGLCERACPVDAVSL---PVPPGGRKRDRRCAVDEAYCLGCGA------ 401 Query: 151 YRMAGMAIDGKDKGEAENEAKPIDVKSLLP 180 P + K L P Sbjct: 402 --------CALKCPTGALRLHPRERKVLHP 423 >UniRef50_D2XBH6 Putative naphthyl-2-methyl-succinate synthase activating enzyme (Fragment) n=1 Tax=bacterium enrichment culture clone N47 RepID=D2XBH6_9BACT Length = 338 Score = 75.4 bits (184), Expect = 9e-13, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 8/98 (8%) Query: 57 EERCVACNLCAVACPVGCIS---LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTA 113 ++CV C C ACP I+ + + + + I+ S+C C C + CP A Sbjct: 61 ADKCVRCGTCVAACPEKAIAPPGKRTEKCTEDLRDVKPPIIDRSKCTLCMKCVDVCPQNA 120 Query: 114 IQ-----LTPDFEMGEYKRQDLVYEKEDLLISGPGKYP 146 I +T D E K D+ Y ++ G P Sbjct: 121 ITRVSSVMTLDEAFSEIKSDDVFYRSSGGGMTLSGGEP 158 Score = 41.9 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 9/27 (33%) Query: 50 LTRDPDGEERCVACNLCAVACPVGCIS 76 + +C C C CP I+ Sbjct: 96 VKPPIIDRSKCTLCMKCVDVCPQNAIT 122 >UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=5 Tax=Euryarchaeota RepID=A5ULB0_METS3 Length = 335 Score = 75.4 bits (184), Expect = 9e-13, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%) Query: 17 IWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 76 I+ ++ R+T ++ LP R +V+ E++CV C++C+ CP G IS Sbjct: 106 IYCGRCYSVCPRDTILF---KRELP--SREDLVIGEISVDEDKCVYCSICSEMCPAGAIS 160 Query: 77 LQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 L ++ S+CI+CG+C+ ACP AI+ Sbjct: 161 LTNNPEFSNDNLNNTIEVDTSKCIYCGVCKRACPQDAIK 199 Score = 67.3 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%) Query: 52 RDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPT 111 ++ C+ C C CP I ++ ++ +C++C +C E CP Sbjct: 97 ESEINDDDCIYCGRCYSVCPRDTILFKRELPSREDLVIGEISVDEDKCVYCSICSEMCPA 156 Query: 112 TAIQLTPDFEMG 123 AI LT + E Sbjct: 157 GAISLTNNPEFS 168 Score = 63.1 bits (152), Expect = 4e-09, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 9/101 (8%) Query: 39 YLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISL-----QKAETKDGRWYPEFFR 93 + P RG I + CV C LC+VACP +SL ET + + Sbjct: 40 PIVPIARGLIEMDLVSVTSNTCVLCGLCSVACPFDALSLTINGNDIKETGNYPVWEVESE 99 Query: 94 INFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEK 134 IN CI+CG C CP I + R+DLV + Sbjct: 100 INDDDCIYCGRCYSVCPRDTILFKREL----PSREDLVIGE 136 Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 1/114 (0%) Query: 51 TRDPDGEERCVACNLCAVACPVGCISLQK-AETKDGRWYPEFFRINFSRCIFCGLCEEAC 109 + +RCV C +C CP + L G + + + C+ CGLC AC Sbjct: 12 RKLSHNNDRCVGCGICTDVCPTSSLRLGPIVPIARGLIEMDLVSVTSNTCVLCGLCSVAC 71 Query: 110 PTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDK 163 P A+ LT + + V+E E + Y + I K + Sbjct: 72 PFDALSLTINGNDIKETGNYPVWEVESEINDDDCIYCGRCYSVCPRDTILFKRE 125 Score = 49.2 bits (116), Expect = 6e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 10/79 (12%) Query: 34 PEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFR 93 P + + + + G + L + + AC+ C CP + + + Sbjct: 238 PVDTINVTKPFEGTLKLVETDESTCKGDACHACQDVCPCDAVEIIDNKA----------T 287 Query: 94 INFSRCIFCGLCEEACPTT 112 IN C CG C ACP Sbjct: 288 INLDYCNLCGACVNACPQN 306 >UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Methanobacteriaceae RepID=A5UJY8_METS3 Length = 347 Score = 75.4 bits (184), Expect = 9e-13, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 17/119 (14%) Query: 36 EPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV-GCISLQKAETKDGRWYPEFFRI 94 E V P R+R +E C+ C C +CP I L + E + + + I Sbjct: 28 EIVEKPSRFRNFPN-----VIKEYCIGCGACISSCPSPNAIKLVRDEDDETKEGVTYPII 82 Query: 95 NFSRCIFCGLCEEACPTTAIQ--------LTPDFEMGEYKRQDLVYEKEDLLISGPGKY 145 N S CI CG C E CPT L P+F + KRQ ++ +D L K Sbjct: 83 NKSACIRCGFCAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFII---DDYLCIRCKKC 138 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 9/71 (12%) Query: 42 PRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIF 101 P + + + C+ C C CPVG I ++ +N +CI Sbjct: 114 PEFNIIPSKRQFIIDDYLCIRCKKCMKQCPVGAIHVEDD---------GKVVVNPFKCIS 164 Query: 102 CGLCEEACPTT 112 CG C + CP Sbjct: 165 CGECLDVCPVN 175 Score = 50.0 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 8/69 (11%) Query: 47 RIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE 106 R+ + E C C +C CP IS + R N ++C+ C +C Sbjct: 253 RLKIRIIDWDSETCKKCQMCIPDCPTKAISFDEKNDTIVR--------NENKCLRCSICY 304 Query: 107 EACPTTAIQ 115 ++CP + I+ Sbjct: 305 QSCPFSTIK 313 >UniRef50_Q8TYP4 CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1 n=17 Tax=Archaea RepID=HDRA1_METKA Length = 669 Score = 75.0 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 48 IVLTRDPDGEERCVACNLCAVACPVGC-------I-SLQKAETKDGRWYPEFFRINFSRC 99 I E+ C C +CA CP+ I + + + P + I+ C Sbjct: 237 IEKKPRYVDEDACTGCGVCAEVCPIEVPNEFDLGIGTRKAIYVPFPQAMPLVYTIDMEHC 296 Query: 100 IFCGLCEEACPTT--AIQLTPDFEMGEYKRQDLV-------YEKEDLLISGPGKYPEYNF 150 I CGLCEEACP AI + E K ++ ++ L G GKY Sbjct: 297 IQCGLCEEACPQDPPAIDFDQEPEEIRLKVGTIIVATGYEEFDASKLEEYGYGKYDNVIT 356 Query: 151 YRMAGMAIDGKDKGEAEN 168 I+ E Sbjct: 357 TLELERMINPAGPTEGHV 374 Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 48 IVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEE 107 I L E+ C C CA CP I + + KDG+ E + C CG C Sbjct: 581 IELITATVDEDVCGGCGACAQVCPFDAIEMVE---KDGKRVAEVQDV---ACQGCGQCAA 634 Query: 108 ACPTTAIQL 116 ACP+ A+QL Sbjct: 635 ACPSGAMQL 643 >UniRef50_B8D101 Hydrogenase large subunit domain protein n=6 Tax=Bacteria RepID=B8D101_HALOH Length = 491 Score = 75.0 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 9/84 (10%) Query: 45 RGRIVL--TRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRW-------YPEFFRIN 95 RG I + + E+CV C LC ACP G I + I+ Sbjct: 134 RGAITIVNNQAYVIREKCVECGLCVKACPYGAILEVERPCTSACSLDAVVPGEKSTAEID 193 Query: 96 FSRCIFCGLCEEACPTTAIQLTPD 119 + CI CG C EACP AI + Sbjct: 194 DNNCIECGSCIEACPFGAISYKSE 217 Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C C C +CP G I++ + R +C+ CGLC +ACP AI Sbjct: 118 NACRNCVAHHCVNSCPRGAITIVNNQAYVIR----------EKCVECGLCVKACPYGAI 166 >UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=A3DCA0_CLOTH Length = 597 Score = 75.0 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 9/67 (13%) Query: 49 VLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEA 108 L E+C +C +CA CPV IS + + I+ ++CI CG+C E Sbjct: 537 ALMHYEIDAEKCKSCGICARQCPVKAISGE---------KKVPYVIDQNKCIKCGVCMEK 587 Query: 109 CPTTAIQ 115 CP AI Sbjct: 588 CPFKAIS 594 Score = 41.9 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 14/38 (36%) Query: 78 QKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 K + I+ +C CG+C CP AI Sbjct: 527 DKKCAAGVCKALMHYEIDAEKCKSCGICARQCPVKAIS 564 >UniRef50_D0L6B6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Bacteria RepID=D0L6B6_GORB4 Length = 527 Score = 75.0 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 60 CVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 C + C CPV CI + G + I+ CI CG C +ACP AI Sbjct: 8 CCSDAACVSVCPVNCIH--PTPEERGFGSSDILHIDPEACIDCGACADACPVDAI 60 Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Query: 38 VYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFS 97 ++ P RG E C+ C CA ACPV I + G F IN Sbjct: 23 IHPTPEERGFGSSDILHIDPEACIDCGACADACPVDAIY---PADRLGTRDKVFIDINAD 79 >UniRef50_B8F9A8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9A8_DESAA Length = 403 Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Query: 55 DGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEAC-PTTA 113 ++C+ CN C CP+ +SL + IN +RCI CGLC C A Sbjct: 290 VDADKCIGCNQCVEICPMEALSLVDDKA----------VINHTRCIGCGLCVPKCGKAKA 339 Query: 114 IQLTPDFEMGEYKRQDLVYEKED 136 I L + + L Y E Sbjct: 340 ISLKERYGHKPPSKDVLAYAAER 362 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.139 0.495 Lambda K H 0.267 0.0426 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,099,211,337 Number of Sequences: 3077464 Number of extensions: 44694961 Number of successful extensions: 175646 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4451 Number of HSP's successfully gapped in prelim test: 5392 Number of HSP's that attempted gapping in prelim test: 134776 Number of HSP's gapped (non-prelim): 26866 length of query: 180 length of database: 1,040,396,356 effective HSP length: 120 effective length of query: 60 effective length of database: 671,100,676 effective search space: 40266040560 effective search space used: 40266040560 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 89 (38.8 bits)