18/01/2012 17:03:45 : INFO  : Run start: Wed Jan 18 17:03:44 GMT 2012
18/01/2012 17:03:50 : INFO  : Initialised job
18/01/2012 17:03:51 : INFO  : Renaming log file 'phyre2_20120118_170343.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/phyre_20120118_170343.log'
18/01/2012 17:03:53 : INFO  : Initialised job:
Sequence
>batch____
MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWAR
AMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQW
ILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQ
DDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYS
GLKTPVGSAS

18/01/2012 17:03:54 : INFO  : Checked sequence
18/01/2012 17:03:57 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 17:03:58 : INFO  : PSI-BLAST 3 iterations
18/01/2012 17:05:59 : INFO  : PSI-BLAST 5 iterations
18/01/2012 17:08:44 : INFO  : Finished PSI-BLAST
18/01/2012 17:08:46 : INFO  : Running Buildali to generate a3m file
18/01/2012 17:30:53 : INFO  : Converting to HMM
18/01/2012 17:30:59 : INFO  : Calibrating HMM
18/01/2012 17:31:12 : INFO  : Searching HMM database
18/01/2012 17:37:01 : INFO  : Finished buildali
18/01/2012 17:37:03 : INFO  : Predicting secondary structure
18/01/2012 17:37:10 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 17:37:11 : INFO  : Predicting Disordered regions
18/01/2012 17:37:14 : INFO  : Predicted Disorder (Disopred)
18/01/2012 17:37:16 : INFO  : Running memsat_svm check
18/01/2012 17:39:35 : INFO  : Globular protein
18/01/2012 17:39:37 : INFO  : Predicted Transmembrane (memsat_svm) ID '320ed57b806ef376'
18/01/2012 17:39:38 : INFO  : Initialising fold library search
18/01/2012 17:39:43 : INFO  : Initialised search input
18/01/2012 17:39:45 : INFO  : Building Ensemble models
18/01/2012 17:39:49 : INFO  : Building hh.d2afhe1.model.1.pdb
18/01/2012 17:40:03 : INFO  : Building hh.d1cp2a_.model.2.pdb
18/01/2012 17:40:15 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/hh.d1cp2a_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/d1cp2a_.2.pdb
18/01/2012 17:40:20 : INFO  : Building hh.c3endA_.model.3.pdb
18/01/2012 17:40:32 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/hh.c3endA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/c3endA_.3.pdb
18/01/2012 17:40:36 : INFO  : Building hh.c2ozeA_.model.4.pdb
18/01/2012 17:40:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/hh.c2ozeA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/c2ozeA_.4.pdb
18/01/2012 17:40:53 : INFO  : Building hh.c3kjgB_.model.5.pdb
18/01/2012 17:41:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/hh.c3kjgB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/c3kjgB_.5.pdb
18/01/2012 17:41:09 : INFO  : Building hh.d1hyqa_.model.6.pdb
18/01/2012 17:41:20 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/hh.d1hyqa_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/320ed57b806ef376/d1hyqa_.6.pdb
18/01/2012 17:41:25 : INFO  : Building d2afhe1.1.pdb
18/01/2012 17:41:37 : INFO  : Building d1cp2a_.2.pdb
18/01/2012 17:41:52 : INFO  : Building c3endA_.3.pdb
18/01/2012 17:42:06 : INFO  : Building c2ozeA_.4.pdb
18/01/2012 17:42:18 : INFO  : Building c3kjgB_.5.pdb
18/01/2012 17:42:32 : INFO  : Building d1hyqa_.6.pdb
18/01/2012 17:42:48 : INFO  : Building c1hyqA_.7.pdb
18/01/2012 17:43:02 : INFO  : Building c2bekB_.8.pdb
18/01/2012 17:43:15 : INFO  : Building d1iona_.9.pdb
18/01/2012 17:43:31 : INFO  : Building c3ez6B_.10.pdb
18/01/2012 17:43:46 : INFO  : Building c3q9lB_.11.pdb
18/01/2012 17:44:01 : INFO  : Building d1g3qa_.12.pdb
18/01/2012 17:44:12 : INFO  : Building c3ea0B_.13.pdb
18/01/2012 17:44:28 : INFO  : Building c2xj9B_.14.pdb
18/01/2012 17:44:41 : INFO  : Building c2ph1A_.15.pdb
18/01/2012 17:44:54 : INFO  : Building c3cwqB_.16.pdb
18/01/2012 17:45:06 : INFO  : Building c3pg5A_.17.pdb
18/01/2012 17:45:20 : INFO  : Building c3ezfA_.18.pdb
18/01/2012 17:45:33 : INFO  : Building c3k9gA_.19.pdb
18/01/2012 17:45:45 : INFO  : Building c3fkqA_.20.pdb
18/01/2012 17:47:28 : INFO  : Finished HH model building
18/01/2012 17:47:30 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 17:48:27 : INFO  : html domain output complete ID '320ed57b806ef376'
18/01/2012 18:51:01 : INFO  : Run end  : Wed Jan 18 18:51:00 GMT 2012
