Phyre 2 alignment of P37655 with c1sxjB_

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Job Description | P37655
Confidence | 88.19% | Date | Thu Jan 5 11:56:28 GMT 2012
Rank | 374 | Aligned Residues | 38
% Identity | 21% | Template | c1sxjB_
PDB info | PDB header:replication | Chain: B: PDB Molecule:activator 1 37 kda subunit; | PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution | 2.85 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | Q | G | V | R | G | G | V | G | T | T | T | I | T | A | A | L | A | W | S | L | Q | M | L | G | E | N | V | L | V | V | D | A | C | P | D | N | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | I | S | G | M | P | G | I | G | K | T | T | S | V | H | C | L | A | H | E | L | L | G | R | S | Y | A | D | G | V | L | E | L | N | A | S | D | D
Template Known Secondary structure |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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