Email l.a.kelley@imperial.ac.uk Description P77154 Date Thu Jan 5 12:25:42 GMT 2012 Unique Job ID 319f30da6dd9a874

Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	T	R	P	V	T	L	S	E	P	H	F	S	Q	H	T	L	N	K	Y	A	S	L	M	A	Q	G	N	G	Y	L	G	L	R	A	S	H	E	E	D	Y	T	R	Q	T	R	G	M	Y	L	A	G	L	Y	H	R	A	G	K	G
Secondary structure
SS confidence
Disorder		?	?	?	?	?									?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		E	I	N	E	L	V	N	L	P	D	V	V	G	M	E	I	A	I	N	G	E	V	F	S	L	S	H	E	A	W	Q	R	E	L	D	F	A	S	G	E	L	R	R	N	V	V	W	R	T	S	N	G	S	G	Y	T	I	A	S	R
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		R	F	V	S	A	D	Q	L	P	L	I	A	L	E	I	T	I	T	P	L	D	A	D	A	S	V	L	I	S	T	G	I	D	A	T	Q	T	N	H	G	R	Q	H	L	D	E	T	Q	V	R	V	F	G	Q	H	L	M	Q	G	S
Secondary structure
SS confidence
Disorder																					?	?		?	?							?	?	?	?	?	?		?	?	?	?	?				?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		Y	T	T	Q	D	G	R	S	D	V	A	I	S	C	C	C	K	V	S	G	D	V	Q	Q	C	Y	T	A	K	E	R	R	L	L	Q	H	T	S	A	Q	L	H	A	G	E	T	M	T	L	Q	K	L	V	W	I	D	W	R	D	D
Secondary structure
SS confidence
Disorder																														?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		R	Q	A	A	L	D	E	W	G	S	A	S	L	R	Q	L	E	M	C	A	Q	Q	S	Y	D	Q	L	L	A	A	S	T	E	N	W	R	Q	W	W	Q	K	R	R	I	T	V	N	G	G	E	A	H	D	Q	Q	A	L	D	Y	A
Secondary structure
SS confidence
Disorder			?																																									?		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		L	Y	H	L	R	I	M	T	P	A	H	D	E	R	S	S	I	A	A	K	G	L	T	G	E	G	Y	K	G	H	V	F	W	D	T	E	V	F	L	L	P	F	H	L	F	S	D	P	T	V	A	R	S	L	L	R	Y	R	W	H
Secondary structure
SS confidence
Disorder										?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		N	L	P	G	A	Q	E	K	A	R	R	N	G	W	Q	G	A	L	F	P	W	E	S	A	R	S	G	E	E	E	T	P	E	F	A	A	I	N	I	R	T	G	L	R	Q	K	V	A	S	A	Q	A	E	H	H	L	V	A	D	I
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		A	W	A	V	I	Q	Y	W	Q	T	T	G	D	E	S	F	I	A	H	E	G	M	A	L	L	L	E	T	A	K	F	W	I	S	R	A	V	R	V	N	D	R	L	E	I	H	D	V	I	G	P	D	E	Y	T	E	H	V	N	N
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence		N	A	Y	T	S	Y	M	A	R	Y	N	V	Q	Q	A	L	N	I	A	R	Q	F	G	C	S	D	D	A	F	I	H	R	A	E	M	F	L	K	E	L	W	M	P	E	I	Q	P	D	G	V	L	P	Q	D	D	S	F	M	A	K
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence		P	A	I	N	L	A	K	Y	K	A	A	A	G	K	Q	T	I	L	L	D	Y	S	R	A	E	V	N	E	M	Q	I	L	K	Q	A	D	V	V	M	L	N	Y	M	L	P	E	Q	F	S	A	A	S	C	L	A	N	L	Q	F	Y
Secondary structure
SS confidence
Disorder										?	?	?	?	?	?									?																						?
Disorder confidence
		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence		E	P	R	T	I	H	D	S	S	L	S	K	A	I	H	G	I	V	A	A	R	C	G	L	L	T	Q	S	Y	Q	F	W	R	E	G	T	E	I	D	L	G	A	D	P	H	S	C	D	D	G	I	H	A	A	A	T	G	A	I	W
Secondary structure
SS confidence
Disorder																																							?
Disorder confidence
		.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Sequence		L	G	A	I	Q	G	F	A	G	V	S	V	R	D	G	E	L	H	L	N	P	A	L	P	E	Q	W	Q	Q	L	S	F	P	L	F	W	Q	G	C	E	L	Q	V	T	L	D	A	Q	R	I	A	I	R	T	S	A	P	V	S	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Sequence		R	L	N	G	Q	L	I	T	V	A	E	E	S	V	F	C	L	G	D	F	I	L	P	F	N	G	T	A	T	K	H	Q	E	D	E
Secondary structure
SS confidence
Disorder																								?				?		?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand