39 c3polA_ Probab=99.85   E-value=2.4e-19  Score=134.05  Aligned_columns=244  Identities=13%

Q ss_pred             CCCCCCEEEEEEECCCCCCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             02474005789508997544121118981004338426258999999997799789999189989999999733541100
Q batch____        14 RQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNE   93 (431)
Q Consensus        14 ~~~~mk~~AVILAaG~GtRl~Plt~~~pK~llPi~gk~PlI~~~L~~l~~~gi~~Iiiv~~~~~~~i~~~l~~~~~~~~~   93 (431)
                      +.-.||- +||+|||.||||.      ||+|+||+|| |||+|+++.|.++|+.+.++|+++..+......+.+.     
T Consensus         6 ~~~~~~~-vIi~A~~~s~Rl~------~K~Ll~v~Gk-pli~~~i~~l~~~~~~~~iiVv~~~~~~~~~~~~~~~-----   72 (262)
T c3polA_           6 DDKHMKH-IVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGV-----   72 (262)
T ss_dssp             TTCCCEE-EEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHTTCCSCSEEEEEESCHHHHHHHHTTTC-----
T ss_pred             HHCCCEE-EEEECCCCCCCCC------CCEEEEECCE-EHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC-----
T ss_conf             0088759-9994487788998------7114436856-5799999999848998289997695888999975399-----


Q ss_pred             CCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCE--EECCCHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             00254034123146712665478089999989987417977099924855--7107227889999984996458888853
Q batch____        94 EMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDH--IYKQDYSRMLIDHVEKGARCTVACMPVP  171 (431)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~Gta~al~~~~~~i~~~~~~~~lVl~gD~--i~~~~~~~~l~~h~~~~a~~t~~~~~~~  171 (431)
                                 ......+....|+..++..+.... ....+.++++.||.  +....+..+++.|...+........ ..
T Consensus        73 -----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~-~~  139 (262)
T c3polA_          73 -----------DVVLTSADHPSGTDRLSEVARIKG-WDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLC-EP  139 (262)
T ss_dssp             -----------EEEECCSCCCCHHHHHHHHHHHHT-CCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEE-EE
T ss_pred             -----------CEEEECCCCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEE-EE
T ss_conf             -----------499964887651268999998500-46898899982895333599999999999976993575644-54


Q ss_pred             CCCCCCCC-----EEEECCCCEEEEEEECC------CCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHCCCCCCCCCH
Q ss_conf             25887750-----89988972055688534------44432334455507876918828999998886405766541002
Q batch____       172 IEEASAFG-----VMAVDENDKIIEFVEKP------ANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDF  240 (431)
Q Consensus       172 ~~~~~~~g-----vv~~d~~~~~~~~~ek~------~~~~~~~~~~~~~l~~~Giyi~~~~~L~~~l~~~~~~~~~~~~~  240 (431)
                      ...+..++     .+..++++.+..+...+      .............+.++|+|.|....+..+.............+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~  219 (262)
T c3polA_         140 IHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESL  219 (262)
T ss_dssp             CCCHHHHHCTTSCEEEECSSSBEEEEESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTC
T ss_pred             CCCHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             04876706777128998689958773023442222210123220121012111213322999998760487620134457


Q ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCEEECCCCEEEECCCHHHHHHHHHHHHCCCC
Q ss_conf             8889999983596699991576520022153203447798999999899855557
Q batch____       241 GKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVP  295 (431)
Q Consensus       241 ~~dli~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~v~t~~~y~~an~~~l~~~~  295 (431)
                        +.+..+-...++.++...          ...|.+++||++|-.++..+.....
T Consensus       220 --~~l~~i~~g~~v~~~~~~----------~~~~~dIdtpeDL~~ae~l~~~~~~  262 (262)
T c3polA_         220 --EQLRVLENGHRIAIAVAE----------ANLPPGVDTQADLDRLNNMPVESFE  262 (262)
T ss_dssp             --TTHHHHHTTCCEEEEECS----------SCCCCCCCSHHHHHHHHTSCGGGGC
T ss_pred             --HHHHHHHCCCCEEEEECC----------CCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             --789999689806999816----------2020068899999999999531069