07/01/2012 03:35:21 : INFO  : Run start: Sat Jan  7 03:35:20 GMT 2012
07/01/2012 03:35:24 : INFO  : Initialised job
07/01/2012 03:35:25 : INFO  : Renaming log file 'phyre2_20120107_033520.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/307825ae17c7bc1c/phyre_20120107_033520.log'
07/01/2012 03:35:25 : INFO  : Initialised job:
Sequence
>batch____
MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAK
QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQ
VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG
VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRN
LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL
RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE

07/01/2012 03:35:26 : INFO  : Checked sequence
07/01/2012 03:35:28 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 03:35:28 : INFO  : PSI-BLAST 3 iterations
07/01/2012 03:37:33 : INFO  : PSI-BLAST 5 iterations
07/01/2012 03:39:47 : INFO  : Finished PSI-BLAST
07/01/2012 03:39:48 : INFO  : Running Buildali to generate a3m file
07/01/2012 03:56:33 : INFO  : Converting to HMM
07/01/2012 03:56:39 : INFO  : Calibrating HMM
07/01/2012 03:56:55 : INFO  : Searching HMM database
07/01/2012 04:04:38 : INFO  : Finished buildali
07/01/2012 04:04:38 : INFO  : Predicting secondary structure
07/01/2012 04:04:42 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 04:04:43 : INFO  : Predicting Disordered regions
07/01/2012 04:04:45 : INFO  : Predicted Disorder (Disopred)
07/01/2012 04:04:46 : INFO  : Running memsat_svm check
07/01/2012 04:07:10 : INFO  : Running memsat_svm full
07/01/2012 04:09:00 : INFO  : Predicted Transmembrane (memsat_svm) ID '307825ae17c7bc1c'
07/01/2012 04:09:00 : INFO  : Initialising fold library search
07/01/2012 04:09:03 : INFO  : Initialised search input
07/01/2012 04:09:04 : INFO  : Building Ensemble models
07/01/2012 04:09:06 : INFO  : Building hh.c1jcgA_.model.1.pdb
07/01/2012 04:09:15 : INFO  : Building c1jcgA_.1.pdb
07/01/2012 04:09:23 : INFO  : Building c2v7yA_.2.pdb
07/01/2012 04:09:32 : INFO  : Building c3d2fC_.3.pdb
07/01/2012 04:09:41 : INFO  : Building c2khoA_.4.pdb
07/01/2012 04:09:51 : INFO  : Building c1dkgD_.5.pdb
07/01/2012 04:10:00 : INFO  : Building c3iucC_.6.pdb
07/01/2012 04:10:10 : INFO  : Building c2v7zA_.7.pdb
07/01/2012 04:10:20 : INFO  : Building c1hpmA_.8.pdb
07/01/2012 04:10:30 : INFO  : Building c1o1f4_.9.pdb
07/01/2012 04:10:41 : INFO  : Building c2p9lA_.10.pdb
07/01/2012 04:10:50 : INFO  : Building c3dwlB_.11.pdb
07/01/2012 04:11:00 : INFO  : Building c3h1qB_.12.pdb
07/01/2012 04:11:10 : INFO  : Building c3qb0C_.13.pdb
07/01/2012 04:11:21 : INFO  : Building c1e4gT_.14.pdb
07/01/2012 04:11:31 : INFO  : Building d1jcea2.15.pdb
07/01/2012 04:11:40 : INFO  : Building c2d0oA_.16.pdb
07/01/2012 04:11:49 : INFO  : Building c2fsnB_.17.pdb
07/01/2012 04:11:58 : INFO  : Building c1mwmA_.18.pdb
07/01/2012 04:12:07 : INFO  : Building d1bupa2.19.pdb
07/01/2012 04:12:15 : INFO  : Building d1dkgd2.20.pdb
07/01/2012 04:12:34 : INFO  : Finished HH model building
07/01/2012 04:12:35 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 04:13:16 : INFO  : html domain output complete ID '307825ae17c7bc1c'
07/01/2012 05:52:14 : INFO  : Run end  : Sat Jan  7 05:52:14 GMT 2012
