 |
| Job Description | P0A8H8 | | Confidence | 12.61% | Date | Thu Jan 5 11:07:52 GMT 2012 |
| Rank | 87 | Aligned Residues | 31 |
| % Identity | 29% | Template | c3b08H_ |
| PDB info |
PDB header:signaling protein/metal binding protein | Chain: H: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1; |
PDBTitle: crystal structure of the mouse hoil1-l-nzf in complex with linear di-2 ubiquitin
|
| Resolution | 1.70 Å |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | E | T | I | T | V | N | C | P | T | C | G | K | T | V | V | W | G | E | I | S | P | F | R | P | F | C | S | K | R | C | Q | L | I | D | L | G | E | W | A | A | E | E | K | R | I | P | S | S | G | D | L | S | E | S | D |
| Query Conservation |   |
  |   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|
| Template Sequence |   |
N | K | P | T | R | P | G | C | E | M | C | C | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | Y | Q | I | P | A | S | Y | Q | P | D | E | E | E |
| Template Known Secondary structure |   |
 |
| T | T |
| S | B |
| T | T | T |
|
| B | . | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
|
|
|
| T | T |
|
|
|
|  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|