133 c1nomA_ Probab=64.65   E-value=8  Score=16.69  Aligned_columns=88  Identities=15%

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECC--CC
Q ss_conf             9999999999998669998999999999999999999997248888987999986536432873433038997089--88
Q batch____        39 HIDTFQRWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDVDLLILSRK--KL  116 (890)
Q Consensus        39 ~~~~~~~~~~~~~~~g~~~~~i~~~~s~l~D~~l~~l~~~~~~~~~~~~aliA~G~~GR~El~~~SDiDll~l~~~--~~  116 (890)
                      ..+.+--...+++.+..+-.+.......+.+.+-.-         ++...+..+||| |+-.-..+|||+++-+++  ..
T Consensus        44 ~~~~~G~k~~e~~~~ri~~~ea~~i~~~i~~~l~~~---------~~~~~v~i~Gs~-RRg~e~~gDiDili~~~~~~~~  113 (242)
T c1nomA_          44 HHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKL---------DPEYIATVCGSF-RRGAESSGDMDVLLTHPNFTSE  113 (242)
T ss_dssp             HHHHHHHHHHHHHTSCEEHHHHHHHHHHHHHHHHHH---------CTTCEEEECHHH-HTTCSEESSEEEEEECTTCCTT
T ss_pred             HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC---------CCCCEEEEECCC-CCCCCCCCCEEEEEECCCCCCC
T ss_conf             998319998999734953999999999999999733---------998489993211-2688866836899963787520


Q ss_pred             CHHHHHHHHHHHHHHHHCCC
Q ss_conf             97799999999999997789
Q batch____       117 PDDQAQKVGELLTLLWDVKL  136 (890)
Q Consensus       117 ~~~~~~~~~~~~~~L~D~gl  136 (890)
                      .....++.++++..|-..++
T Consensus       114 ~~~~~~~l~~v~~~l~~~~~  133 (242)
T c1nomA_         114 SSKQPKLLHRVVEQLQKVRF  133 (242)
T ss_dssp             TCCCHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHHCCC
T ss_conf             00035789999999974897