19 c3js6A_ Probab=98.19   E-value=0.00013  Score=48.69  Aligned_columns=221  Identities=12%

Q ss_pred             CCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEE--------------------------------------EEECCCCC
Q ss_conf             7857999982778348999996399268978643--------------------------------------44011112
Q batch____         4 TSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIK--------------------------------------RKVRLAAG   45 (494)
Q Consensus         4 ~~~~~AvIDiGSNSirl~I~e~~~~~~~~i~~~k--------------------------------------~~vrLg~g   45 (494)
                      |+.++.+||+|...+.+..-...-.-+..+....                                      ........
T Consensus         1 ~n~~i~gID~G~~~tK~~~~~~~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~a~~~~~~~~~~~   80 (321)
T c3js6A_           1 SNVYVXALDFGNGFVKGKINDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTGKDTA   80 (321)
T ss_dssp             CCEEEEEEEECSSEEEEEETTEEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCCEECC
T ss_pred             CCCEEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHHHHCCCCCCCCC
T ss_conf             98368999708731899988902674355414654433223345455432102333106827898257751154534444


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHCC-------------CCEEEEC
Q ss_conf             232389698999999999999999986089957999970787437888999999999739-------------9619957
Q batch____        46 LNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQEILG-------------CPVQVIS  112 (494)
Q Consensus        46 ~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~~i~~vATsAlR~A~N~~~fl~~i~~~tG-------------~~i~VIs  112 (494)
                      ...+...+++.....+.+|.........-.+....+++.-.---......++.+......             -++.|++
T Consensus        81 ~~~~k~~~~~~~~l~l~al~~~~~~~~~~~~~~~lv~gLP~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~i~I~~v~V~p  160 (321)
T c3js6A_          81 STNDRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGXPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVA  160 (321)
T ss_dssp             CSTTGGGSHHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEEEEEE
T ss_conf             45673367547999999999998623787630489972895787688999999850481599987878999999999995


Q ss_pred             HHHHHHHHHH---HHHHHCCCCCCEEEEEECCCCEEEEEEECCEEE--EEEEECCHHHHHHH----------HHHCCCCC
Q ss_conf             6799999999---998618776868999836881588984189068--88872305799998----------85136999
Q batch____       113 GEEEARLIYQ---GVAHTTGGADQRLVVDIGGASTELVTGTGAQTT--SLFSLSMGCVTWLE----------RYFADRNL  177 (494)
Q Consensus       113 G~EEA~l~y~---gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e----------~f~~~~~~  177 (494)
                      ..-=|.+.|.   ............+|+|||||.|.++.++++.+.  .+.+++.|+..+.+          .+......
T Consensus       161 Eg~ga~~~~~~~~~~~~~~~~~~~v~viDiG~gTtD~~~~~~~~~~~~~~~~~~~G~~~~~~~I~~~i~~~~~~~~~id~  240 (321)
T c3js6A_         161 QPXGTLLDLNXENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNXKRVEEESFVINKGTIDFYKRIASHVSTPRMIEKGLEF  240 (321)
T ss_dssp             HHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTCCHHHHHSCCCC
T ss_pred             CCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEECCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf             75156653013444542223458579997589807999972850040000442012899999999997542044432441


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHHH
Q ss_conf             9889999999999999999987331-5995999973208999999860
Q batch____       178 GQENFDAAEKAAREVLRPVADELRY-HGWKVCVGASGTVQALQEIMMA  224 (494)
Q Consensus       178 ~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~ig~gGt~~~la~~~~~  224 (494)
                      +..-.+.+..++...+..+...+.. .....++.+||....+...+.+
T Consensus       241 ~~~i~~~~~~~~~~i~~~i~~~~~~~~~~~~vi~~GGGa~~l~~~l~~  288 (321)
T c3js6A_         241 KDEFYKEQDSLIEEVXSNFEITVGNINSIDRIIVTGGGANIHFDSLSH  288 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
T ss_conf             789999999999999999998630300145599972248999999997