 |
| Job Description | P11864 | | Confidence | 2.47% | Date | Thu Jan 5 11:32:51 GMT 2012 |
| Rank | 88 | Aligned Residues | 32 |
| % Identity | 38% | Template | c1mofA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:moloney murine leukemia virus p15; |
PDBTitle: coat protein
|
| Resolution | 1.70 Å |
|
|   |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | L | E | A | L | A | P | G | I | E | K | L | K | Q | . |
. |
T | S | I | E | M | V | T | L | L | N | . |
. |
. |
. |
. |
. |
. |
T | L | Q | P | G | G | K | C |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|
|
| Template Sequence |   |
D | L | R | E | V | E | K | S | I | S | N | L | E | K | S | L | T | S | L | S | E | V | V | L | Q | N | R | R | G | L | D | L | L | F | L | K | E | G | G | L | C |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G | T |
|  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|