BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (274 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95... 556 e-157 UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63... 402 e-111 UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35... 279 8e-74 UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae ... 258 2e-67 UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus R... 241 1e-62 UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endop... 229 7e-59 UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae ... 228 2e-58 UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18... 223 4e-57 UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endop... 216 6e-55 UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, puta... 216 7e-55 UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endop... 213 4e-54 UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endop... 206 7e-52 UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endop... 206 8e-52 UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 ... 204 2e-51 UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum Re... 202 1e-50 UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endop... 194 4e-48 UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endop... 190 4e-47 UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 ... 187 4e-46 UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS ... 179 1e-43 UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopime... 177 2e-43 UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endop... 176 1e-42 UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, tru... 175 1e-42 UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16... 169 8e-41 UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 ... 169 1e-40 UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hom... 160 6e-38 UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 ... 159 1e-37 UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endop... 149 9e-35 UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 ... 146 8e-34 UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/A... 146 9e-34 UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 ... 104 3e-21 UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus ... 68 4e-10 UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 ... 65 3e-09 UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendope... 50 7e-05 UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium ... 50 1e-04 UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacific... 49 2e-04 UniRef50_A9FG49 Putative penicillin-insensitive murein endopepti... 49 2e-04 UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacific... 47 8e-04 UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 T... 46 0.002 UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 ... 42 0.021 UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacific... 42 0.022 UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacific... 41 0.036 >UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95 Tax=Enterobacteriaceae RepID=MEPA_ECOL5 Length = 274 Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust. Identities = 271/274 (98%), Positives = 271/274 (98%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV Sbjct: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MRTDQRRYFGHPDLVMFIQRLS QVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD Sbjct: 61 MRTDQRRYFGHPDLVMFIQRLSRQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV TLWKPEIFSLIKLAAQDKDVTRIFVNP Sbjct: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVPTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPP GDGCGAELQ Sbjct: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI Sbjct: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 >UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63 Tax=Enterobacteriaceae RepID=MEPA_YERPA Length = 275 Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/272 (69%), Positives = 220/272 (80%), Gaps = 1/272 (0%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 M + ++AL+ +AATPWQKIT PV GS QSIG F+NGC++GA LP++S YQV Sbjct: 1 MKNWIVGMVALVTMVPVMAATPWQKITHPVAGSPQSIGGFANGCVIGAQPLPLESADYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MR+DQRRYFGHPDL+ FI RLS+Q +GTVLIGDM MPAGGRF+ GHASHQ+GLDVD Sbjct: 61 MRSDQRRYFGHPDLLNFIHRLSAQAHQQQLGTVLIGDMAMPAGGRFSSGHASHQSGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 I+LQLPK RW+ QLL+PQ +DLV+ DGK V+ LW+P+I SLIKLAA+D DVTRIFVNP Sbjct: 121 IWLQLPKQRWSQQQLLKPQPIDLVAVDGKRVIPALWQPQIESLIKLAAKDNDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIK+QLCLDAG DR WL KVRPWF HRAHMHVRLRCPA+SLEC DQ PP GDGCGAEL+ Sbjct: 181 AIKKQLCLDAGADRQWLHKVRPWFAHRAHMHVRLRCPANSLECVDQDTPPPGDGCGAELE 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEH 272 SWF+PP P + KP K PPPLPPSCQALLD H Sbjct: 241 SWFQPPPP-SAKPGKTLPPPLPPSCQALLDNH 271 >UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35 Tax=Pasteurellaceae RepID=MEPA_HAEIN Length = 286 Score = 279 bits (713), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 133/271 (49%), Positives = 178/271 (65%), Gaps = 3/271 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL + G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRAKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIFVN Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIFVN 186 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 PAIK +LC AG DR WL K+RPW H +H HVRL CPAD+ CE+Q P+GDGCG EL Sbjct: 187 PAIKVKLCQTAGNDRGWLHKIRPWHGHNSHFHVRLTCPADASYCENQAPVPAGDGCGDEL 246 Query: 240 QSWFEPPKPGTTKPEKKTPPPLPPSCQALLD 270 SWFEPPKPGT+ + K PP P CQ +L+ Sbjct: 247 YSWFEPPKPGTSVSKPKVTPPEPFLCQQILN 277 >UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae RepID=B8K7B3_VIBPA Length = 285 Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 130/269 (48%), Positives = 178/269 (66%), Gaps = 7/269 (2%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ALL +L S + A+PW+++TQP + QSIGS++NGC+ G +LP+ + YQV+R+ + Sbjct: 13 ALLLILVFSPA-HASPWEQVTQPSSQAPQSIGSYANGCLAGGASLPLSGDGYQVIRSQRA 71 Query: 67 RYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP 126 RY+GHPD + FIQRL + +LIGDM +P GGRF+ GH+SHQTGLD+DI+L+L Sbjct: 72 RYYGHPDAIGFIQRLGALSQQQLSTHILIGDMSLPQGGRFSSGHSSHQTGLDIDIWLKLA 131 Query: 127 KTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL 186 + QL P+ L +V+ + ++ W P F L+KLAA D+ V RIFV+P IK++L Sbjct: 132 DEPLSQTQLAEPKPLSVVNIEQYQLLKNNWNPRHFELVKLAASDEQVARIFVHPVIKEKL 191 Query: 187 CL-DAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP 245 C + +DR WLRKVRPW+ H HMHVRL+CP DS C+ Q PP GDGCGAEL SW Sbjct: 192 CASEQASDRAWLRKVRPWWGHHYHMHVRLKCPQDSRHCKPQAAPPQGDGCGAELASWKPQ 251 Query: 246 PKP-----GTTKPEKKTPPPLPPSCQALL 269 PKP + K +KK+P +P C+ LL Sbjct: 252 PKPAAPKAASVKAKKKSPKVMPEQCRQLL 280 >UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus RepID=Q7MNJ8_VIBVY Length = 276 Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/256 (44%), Positives = 163/256 (63%), Gaps = 3/256 (1%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 +L T W+ +T P AQSIGS++NGC+ G LP++ YQV+RT++ RYF HP+ V Sbjct: 19 ALQMTAWELVTAPTRERAQSIGSYANGCLDGGVALPLEGAGYQVVRTERNRYFAHPETVN 78 Query: 77 FIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL 136 FIQ L T++I D+ +P GGRF+ GHASHQTGLD+D++L+L + +L Sbjct: 79 FIQELGYYADTHLASTLMIADVSLPRGGRFSFGHASHQTGLDIDVWLKLNTSPLNKYELE 138 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLC-LDAGTDRD 195 + + +V+ D + + W+ E F LI+ AA++ V RIFV+ IKQ+LC ++ T R Sbjct: 139 QAKTESVVNFDTMTIRADEWRDEQFELIRAAAENGRVARIFVHAVIKQRLCQMETSTHRS 198 Query: 196 WLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK 255 WLRKVRPW+ H +HMHVRL CP S +C +Q LPP GDGCG E+ SW E P P K ++ Sbjct: 199 WLRKVRPWWGHSSHMHVRLSCPQGSDDCIEQALPPEGDGCGEEVLSWIERPTPTAKKAQE 258 Query: 256 KTPPPLPPSCQALLDE 271 P P+ +C +L++ Sbjct: 259 --PEPISEACVTVLNQ 272 >UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KR39_SHEWM Length = 278 Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 147/226 (65%), Gaps = 2/226 (0%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 +A PW ++ QP GS+ +IGS+SNGC+ G L + E +QV+RT ++RY+GH DLV FI Sbjct: 20 SANPWARVEQPFTGSSDAIGSYSNGCLSGGVGLASEGEGFQVIRTSRKRYYGHADLVNFI 79 Query: 79 QRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRP 138 ++ + G+ +LIGDM MP GG F GH SHQ GLDVDI+L+ + T+ ++ P Sbjct: 80 NEYAATLKQAGLDDLLIGDMSMPRGGHFTSGHRSHQIGLDVDIWLRQANRKLTAQEIENP 139 Query: 139 QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLR 198 + LD+V+R V + W +I+LAA DK V RIFV+P IKQQLC A WL+ Sbjct: 140 KKLDVVNRKAFKVNAN-WSGAHGVMIRLAALDKRVARIFVHPVIKQQLCSQAEQGSSWLQ 198 Query: 199 KVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE 244 KVRPW+ H +HMH+RL+CP +S CE Q LPP GDGC EL W E Sbjct: 199 KVRPWWGHSSHMHIRLKCPDNSQLCEGQDLPPEGDGCD-ELSWWQE 243 >UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICV4_VIBHO Length = 280 Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 146/237 (61%) Query: 6 IALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQ 65 I + + S A A PW+K+ P PG+ +SIGS++NGC+ G LP++ E YQV+R + Sbjct: 11 ICMFLIGFSMAVAQANPWEKVQAPYPGAEKSIGSYANGCLSGGVALPLKGEGYQVIRPSR 70 Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQL 125 RY+GHP ++ ++ +L+ + G+ ++I D+ MP GG F GH+SHQTGLD DI+L Sbjct: 71 NRYYGHPAMIAYLTKLARKTKGFGLDDLMIADIAMPRGGNFTQGHSSHQTGLDADIWLSF 130 Query: 126 PKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQ 185 T L P A+ +V + W E L ++AA + +V RIFV+P IK+ Sbjct: 131 APESLTRDSLESPVAVSMVDLQNYALKRDNWMKEHAILFQVAASEPEVARIFVHPVIKET 190 Query: 186 LCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW 242 LC A DR WLRKVRPW+ H HMH+RL+CP S+ C Q PP+GDGCGAEL SW Sbjct: 191 LCDMAWEDRRWLRKVRPWWGHHYHMHIRLQCPEGSVNCIAQNTPPAGDGCGAELISW 247 >UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18 Tax=Vibrionales RepID=B7VJP4_VIBSL Length = 279 Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 3/237 (1%) Query: 9 LALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY 68 LAL+ S ++AT W+K P S SIGS++NGC+ GA LPI + YQV+R + RY Sbjct: 7 LALIFCSFVVSATSWEKEKSPTRNSTSSIGSYANGCLDGAQALPINGQGYQVIRPQRERY 66 Query: 69 FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT 128 +GH + + FI+RL S +L+GD+ +P GGRF+ GH+SHQTGLD+DI+L+L Sbjct: 67 YGHTESIQFIERLGLTTSKQLNTNLLVGDISLPRGGRFSSGHSSHQTGLDIDIWLRLTDK 126 Query: 129 RWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCL 188 + + +L P+ L +V + + W + F +I+ AA+D+ V RIFV+P IK LC Sbjct: 127 KLSENELAVPKPLSVVDLTNYKLRESNWTDDHFQVIRYAAKDEKVVRIFVHPVIKHTLCE 186 Query: 189 DAGTD---RDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW 242 +D R WL K+RPW+ H +H HVRL+CP S C Q PP GDGCG EL SW Sbjct: 187 QENSDANGRAWLGKIRPWWGHHSHFHVRLKCPKGSSNCIAQASPPKGDGCGDELASW 243 >UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endopeptidase n=2 Tax=Shewanella RepID=B0TS44_SHEHH Length = 298 Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 149/239 (62%), Gaps = 4/239 (1%) Query: 5 AIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD 64 AI L LL SSA++A W+ P A +IGS++NGC+ GA+ LP+ YQV+R Sbjct: 25 AIVGLNLLVSSAAIA-NLWEAADTPYVSQASAIGSYANGCLKGAEALPLNGNGYQVIRPQ 83 Query: 65 QRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ 124 ++RY+GHP+L+ FI++ S+ ++ LG +LI DM MP GG F GH SHQ GLDVDI+L+ Sbjct: 84 RQRYYGHPELIEFIEQYSTSLNRLGSDDILIADMSMPRGGNFTQGHTSHQIGLDVDIWLK 143 Query: 125 LPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQ 184 L ++ +P L LV++ + + LW ++KLAAQD V RIFV+P IKQ Sbjct: 144 LTAEPLLDSEREQPTPLKLVNQKQFKLDTQLWSNTQTQMVKLAAQDARVARIFVSPVIKQ 203 Query: 185 QLCLDAGTDRD-WLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW 242 LC D G D D WL KVRPW+ H HMHVRLRCP C +Q P G+GC +EL W Sbjct: 204 HLC-DLGLDDDAWLEKVRPWWGHTYHMHVRLRCPKGDEFCREQAKIPKGNGC-SELSWW 260 >UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUQ4_SHEPW Length = 289 Score = 216 bits (550), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 108/248 (43%), Positives = 149/248 (60%), Gaps = 7/248 (2%) Query: 10 ALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYF 69 ALL S+ A PW+++ P G A ++GS++NGC+ G LP ++V+R ++RRYF Sbjct: 21 ALLLFSSITFANPWEQVNSPFDGVAAAVGSYANGCLAGGKALPSSGPGFEVIRPERRRYF 80 Query: 70 GHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTR 129 GHP L+ FI+ SS +LI DM MP GG F GH+SHQ GLDVDI+ +L + Sbjct: 81 GHPTLISFIEDYSSHFRQYSKSNLLIADMSMPRGGNFTHGHSSHQIGLDVDIWFKLAEQA 140 Query: 130 WTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLC-L 188 T QL +P+ D+V + S LW+ + +++LAA+D V RIF++P IKQ LC + Sbjct: 141 LTVMQLAQPEPFDIVHTKQFRLDSKLWQAQHTRMVQLAAEDSRVARIFISPVIKQHLCDM 200 Query: 189 DAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKP 248 D D WL KVRPW+ H HMHVRL CP D ++C +Q P G+GC EL W K Sbjct: 201 DLANDA-WLNKVRPWWGHTYHMHVRLHCPEDDVDCIEQAPIPKGNGCN-ELSWW----KQ 254 Query: 249 GTTKPEKK 256 T+P+ K Sbjct: 255 QYTQPKLK 262 >UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDV9_CHRVI Length = 289 Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 116/278 (41%), Positives = 157/278 (56%), Gaps = 8/278 (2%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + + + L+L + ++ ATPW + +P G + G +NGCI GAD LP Y Sbjct: 12 LGRRVVLALSLCLPTLTVLATPWGDVQRPSSGLTEVFGGAANGCIGGADALPETGPGYVS 71 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + RY+GHPDL+ F+ L G V+IGD+ P GGR + H SHQ GLDVD Sbjct: 72 IRRYRNRYYGHPDLIRFVHDLGRGQQQRGSQFVMIGDLSQPRGGRMSSSHRSHQNGLDVD 131 Query: 121 IFLQLPKTRWTSAQLL--RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 ++ L + + QL+ R +V+ G+ VS W F+LI+ AA+ V RIFV Sbjct: 132 VWFTLANSPTAARQLMDDRADPASMVAPGGR-TVSRHWGASQFALIESAARHPRVDRIFV 190 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAE 238 N AIKQ+LC A DR WLRKVRPW+ H AH HVRL CPADS CEDQ P GDGCG + Sbjct: 191 NAAIKQELCQSARGDRAWLRKVRPWWGHDAHFHVRLACPADSPSCEDQSPVPPGDGCGED 250 Query: 239 LQSWF-EPPKPGTTKPEKKT----PPPLPPSCQALLDE 271 L W + G + + KT P +P +C+A+L + Sbjct: 251 LAWWLSDEVLSGRARSKGKTTRAAEPEMPFACRAVLTD 288 >UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endopeptidase n=13 Tax=Alphaproteobacteria RepID=B0UCG4_METS4 Length = 311 Score = 206 bits (524), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 138/221 (62%), Gaps = 2/221 (0%) Query: 25 KITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQ 84 + T P AQ+IGS++ GC+ GA+ LP +QVMR + R +GHP LV F++R++S+ Sbjct: 56 RATTPASLPAQAIGSYARGCVAGAEALPTNGPTWQVMRLSRNRNWGHPVLVAFLERIASK 115 Query: 85 V-SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALD 142 G +L+GDM P GG GHASHQ GLD D++L +P + A+ A + Sbjct: 116 APGRAGWPGLLVGDMSQPRGGPMLTGHASHQLGLDADVWLTPMPDRTLSRAEREEISATN 175 Query: 143 LVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRP 202 +V D + + +W+PE LI++ A+ +V RIFVNPAIK LC +AG++R WL KVRP Sbjct: 176 VVRADRRDIDPAVWRPEHGRLIRMVAEQPEVARIFVNPAIKLALCREAGSERRWLTKVRP 235 Query: 203 WFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 + H H H+RL CP+ C+DQ PPSGDGCGAEL WF Sbjct: 236 MYGHNYHFHIRLECPSGDHACKDQEPPPSGDGCGAELDYWF 276 >UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LE77_TOLAT Length = 265 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 143/253 (56%), Gaps = 2/253 (0%) Query: 20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQ 79 + PW P GSA++IG ++ GC+ GA LP YQ++R Q+R +GHP + ++ Sbjct: 11 SNPWAHQVTPSTGSAEAIGGYAAGCLQGAVALPEHGTGYQILRPRQKRIYGHPIMQQYVL 70 Query: 80 RLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQ 139 L+ Q G+ +L+GDM M GG F+ GH SHQ+GLD D + + ++ + Sbjct: 71 DLARQSKKAGLPDILVGDMAMAKGGPFSSGHRSHQSGLDTDFWFRFAAKPLSARTRNTIK 130 Query: 140 ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG-TDRDWLR 198 LD+V V + ++ +L+KLAAQD V RIFVNP IKQ +C G TD WL Sbjct: 131 PLDMVDFRRNKVNKNFGQQQV-TLLKLAAQDPRVERIFVNPPIKQAMCDQFGATDPTWLG 189 Query: 199 KVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTP 258 K+RPWF H AH HVRL CP S +CE Q P G GCGAELQSW P ++KP Sbjct: 190 KLRPWFGHSAHFHVRLHCPVGSKDCEPQKPYPEGSGCGAELQSWLTKPAMVSSKPLPNRM 249 Query: 259 PPLPPSCQALLDE 271 P LP C+ LL Sbjct: 250 PDLPDRCEILLSN 262 >UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LL99_HALO1 Length = 299 Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 153/260 (58%), Gaps = 13/260 (5%) Query: 21 TPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQR 80 +PW KI QP G A++IG + GC+ GA+ LP+ + V+R + R+FGHP L+ +++ Sbjct: 43 SPWGKIRQPAEGPARAIGGYGAGCVQGAEELPVSGPGFHVVRPRRHRHFGHPVLIAYLRD 102 Query: 81 LSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP---KTRWTSAQLLR 137 L+S+V G +L+GD+G P GG GH+SHQTGLDVD++ + P + R + R Sbjct: 103 LASRVRAAGGRDLLLGDLGQPRGGPAPSGHSSHQTGLDVDVWYRDPGHDEQRPLRRRERR 162 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWL 197 V DG +S P + ++ LAA D+ V RIFVNP IK+ LC AG +RDWL Sbjct: 163 ALRDRSVVVDG--ALSAEMAPRVMRVLSLAADDERVARIFVNPVIKRDLCAQAGEERDWL 220 Query: 198 RKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK-- 255 RK+RPW+ H AH HVRL CP DS EC+ Q P+GDGC E+ W + + K E+ Sbjct: 221 RKLRPWWGHDAHFHVRLECPDDSPECKAQAALPAGDGCD-EVSWWLDEERQAERKEERGR 279 Query: 256 -----KTPPPLPPSCQALLD 270 + P LP +C LLD Sbjct: 280 YRKNVRGLPELPAACAPLLD 299 >UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum RepID=Q2W4C2_MAGSA Length = 280 Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 114/276 (41%), Positives = 151/276 (54%), Gaps = 20/276 (7%) Query: 5 AIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD 64 A +LA A++A W I QP G A IGS + GC+ GA L +QV+R Sbjct: 11 AALVLATGAAAAESGQQQWSGIGQPATGPASVIGSPAAGCLKGAVPLAEDEHSFQVLRPS 70 Query: 65 QRRYFGHPDLVMFIQRLSSQVSNLGM-GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 + R++GHP + F+ L+ G+ G +LIGDM P GG GH SHQ GLDVDI+ Sbjct: 71 RNRHWGHPATIRFVGDLARATKGEGISGPLLIGDMAQPRGGPMPAGHGSHQNGLDVDIWF 130 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 +LP + A++ P+ + +V G + W P L++LAA+ V RIFVNPAIK Sbjct: 131 RLPAKPLSRAEIETPKPVSMVY--GTEIDEDAWTPAQARLLELAARAPQVDRIFVNPAIK 188 Query: 184 QQLC--LDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQS 241 + +C + A DR WLRK+RPW+ H H HVRL CPADS +CE Q P GDGCG EL+S Sbjct: 189 KAMCRAVPADGDRSWLRKLRPWWGHDEHFHVRLSCPADSPDCERQKPMPEGDGCGEELES 248 Query: 242 WFEPPKPGTTKPEKKTPP--------PLPPSCQALL 269 W + +P PP PLP +C L Sbjct: 249 W-------SARPTWPAPPSRPHHQSRPLPEACAGLF 277 >UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEN3_9RHIZ Length = 491 Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 109/263 (41%), Positives = 146/263 (55%), Gaps = 19/263 (7%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 + +P P +A++IG +S GC+ GA+ LPI +Q MR + R +GHP L+ I+ + Sbjct: 162 VKKPAPLAARAIGYYSRGCLSGAEALPIDGPAWQEMRLSRNRNWGHPQLISLIKTFADDA 221 Query: 86 SNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALDL 143 G +L+GD+ P GG GHASHQ GLD DI+L +PK R T + A + Sbjct: 222 QKQDGWPGLLVGDIAQPRGGPMITGHASHQVGLDADIWLTPMPKRRLTRKERETLNATSM 281 Query: 144 VSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPW 203 + G V ++ + SLIK AA +V RIFV+PAIK+ LC AGTDR WL KVRP+ Sbjct: 282 LDDTGVAVDPKVFTDKQVSLIKRAASYPEVERIFVHPAIKKALCTAAGTDRQWLGKVRPF 341 Query: 204 FQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE---PPKPGTTKPEKKTP-- 258 + H H H+R++CPAD C+ QP P DGCG E+ W P KP + P K P Sbjct: 342 YGHYYHFHMRIKCPADFAGCKPQPPPTGDDGCGKEVDQWLSKVIPAKPSMSPPIPKPPQS 401 Query: 259 ----PP--------LPPSCQALL 269 PP LPP C+ALL Sbjct: 402 VSVRPPAPPIMLADLPPECRALL 424 >UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBB0_RHOVA Length = 317 Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 104/248 (41%), Positives = 142/248 (57%), Gaps = 12/248 (4%) Query: 35 QSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL-GMGTV 93 Q+IG + GC+ GA + + + +Q MR + RY+GHP L+ +I+ L+ V L G+ + Sbjct: 57 QAIGRYDLGCVAGAQKIAMNGDGWQAMRLSRNRYWGHPALISYIETLARDVKRLDGLPGI 116 Query: 94 LIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQ-LLRPQALDLVSRDGKHVV 152 L+GDM P GG GGHASHQ+G+DVD++ L R SA+ + A + V + V Sbjct: 117 LVGDMAQPIGGPLLGGHASHQSGIDVDLWYNLMPARTLSAEDREKFAATNYVDQTTLTVD 176 Query: 153 STLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHV 212 W L+K AA +V+RIFV+PAIK+ LC AG+DR WL+K+RPW++H H+HV Sbjct: 177 PARWTDAQTKLVKRAASYPEVSRIFVHPAIKKALCDSAGSDRVWLQKIRPWYKHDDHLHV 236 Query: 213 RLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTP----------PPLP 262 RL CPA S C QP + DGCG EL +WF + KP K LP Sbjct: 237 RLSCPAGSNGCVSQPAIKADDGCGEELDAWFRKLRAPRPKPPKPPKPQPKPKPMLVTDLP 296 Query: 263 PSCQALLD 270 CQALLD Sbjct: 297 GECQALLD 304 >UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 Tax=Aeromonas RepID=A0KJ73_AERHH Length = 260 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 95/242 (39%), Positives = 140/242 (57%), Gaps = 5/242 (2%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 + +P P A++IG +S GC+ LP+ YQV+RT + RY+GHP+L+ ++ L++Q Sbjct: 20 LAEPHPRQAEAIGGYSAGCLKNGVALPLTGPGYQVIRTKRLRYYGHPELIAYLTTLANQT 79 Query: 86 SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVS 145 GM + I D+ M GG F GH SHQTGLD DI+ ++ ++ + P+ L+ Sbjct: 80 RMAGMPDLYIADLAMAHGGPFTSGHRSHQTGLDADIWFRMANQPISTWEQDAPKEWALID 139 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQ 205 V+ + P+ +L++LAA +V RIF+NP +K ++C A D W+ K+RPW Sbjct: 140 EPSYRVLPGRFGPQQLNLLRLAASKPEVARIFINPVLKAEVCKRA-PDEPWVGKLRPWVG 198 Query: 206 HRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF--EPPKPGTTKPEKKTPPPLPP 263 H +H HVRLRCPA S +C+ Q P G+GCGAEL SW +P P + K P LP Sbjct: 199 HFSHFHVRLRCPAGSPDCQPQAPIPPGNGCGAELASWLKDKPQLPKVSMAYHK--PRLPA 256 Query: 264 SC 265 C Sbjct: 257 RC 258 >UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS family M74 n=24 Tax=Alphaproteobacteria RepID=Q3SVT3_NITWN Length = 350 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 129/222 (58%), Gaps = 3/222 (1%) Query: 25 KITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQ 84 + T P G+ IG ++ GCI GA+ LP+ +QVMR + R + HP +V ++R+S++ Sbjct: 89 RKTLPAAGAPYVIGFYARGCIAGAEALPVTGPTWQVMRLSRNRNWAHPAMVALLERVSAK 148 Query: 85 VS-NLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALD 142 + G +LIGDM P GG GHASHQ GLD D++L +P + + A+ Sbjct: 149 ARRDAGWPGLLIGDMAQPRGGPMLTGHASHQIGLDADVWLTPMPNRLLSRNEREEMSAVM 208 Query: 143 LVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRP 202 +V RD + W P +I+ AA++ V RIFVN AIK+ LC +A DR WL KVRP Sbjct: 209 MVRRDRLDIDPRAWTPSHLGVIRAAAREPSVERIFVNAAIKKALCREAKGDRSWLSKVRP 268 Query: 203 WFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAE-LQSWF 243 + H H H+R++CP S +CE QP P +GCGA+ L WF Sbjct: 269 MYGHDYHFHIRIKCPPGSPQCESQPPPGPAEGCGAQDLAYWF 310 >UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BS55_GRABC Length = 276 Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 8/244 (3%) Query: 2 NKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVM 61 +K + ++ LL+ S + + P + QPV Q IG NGCI GA LP + +Q + Sbjct: 4 SKLLVGIVMLLSCSGMVLSAP--VLAQPV----QIIGPAGNGCIAGAQRLPDEGPGWQTI 57 Query: 62 RTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI 121 R D+ ++ P + ++ L++++ G+ + +GDM P GGR GGH SHQ GLDVD+ Sbjct: 58 RRDRSSFWSAPVTINGVKTLATRLHAQGLPDLYVGDMSAPHGGRLPGGHGSHQNGLDVDL 117 Query: 122 FLQL-PKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 +L L P+ T + + +VS DG + S W + +L+ +AA +V R+ VNP Sbjct: 118 YLDLTPRPALTPDERNVLEPPSMVSADGNSL-SPAWTQDTVTLLHMAATLPNVDRVLVNP 176 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 IK+ LC DR WL +RPW+ H+AHMHVR RCPA C P PP+GDGC L Sbjct: 177 VIKRALCEQVSGDRSWLHLIRPWWGHKAHMHVRFRCPAGQTLCVQAPPPPTGDGCDTTLA 236 Query: 241 SWFE 244 WF+ Sbjct: 237 WWFQ 240 >UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD59_RHOVA Length = 427 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 138/262 (52%), Gaps = 15/262 (5%) Query: 28 QPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV-S 86 +P +S+G ++ GC+ GA LP +Q MR + R++G+P LV FI++ + + Sbjct: 161 EPAKMETRSVGFYAKGCLAGAAQLPENGPVWQGMRVSRNRHWGNPVLVTFIEKFAKDAKA 220 Query: 87 NLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSR 146 G +LIGDM MP GG GHASHQ GLDVDI+ + R + +D V Sbjct: 221 KDGWPGLLIGDMSMPRGGPMPFGHASHQVGLDVDIWYKPMPGRTLAVDEREQMKMDSVLL 280 Query: 147 DGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQH 206 D HV W P+ L++ A +VTR+FVNPAIK+ +C + DR +L K++P H Sbjct: 281 DPVHVNEQSWTPDHVKLLRRAVSYPEVTRVFVNPAIKKWMCDNVTDDRGFLHKIQPIMGH 340 Query: 207 RAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPKPGTTKPEKKTPPP-- 260 AH HVRL CPA C +QP P+GDGCG L W +P P KP + P Sbjct: 341 DAHFHVRLACPAGDEGCRNQPPLPAGDGCGGGLDKWIAKLSKPVVPVAPKPAVASAPAKP 400 Query: 261 --------LPPSCQALLDEHVI 274 LPP+C A+L+ I Sbjct: 401 KAGITMAQLPPACVAVLNAPSI 422 >UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, truncation n=1 Tax=Methylococcus capsulatus RepID=Q607R5_METCA Length = 279 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/278 (37%), Positives = 143/278 (51%), Gaps = 9/278 (3%) Query: 1 MNKTAIALLALLASSASLAATP--WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHY 58 M +AL +L++ S AA W ++ P + ++IG GC+ G LP + E Y Sbjct: 1 MPSNRLALFVVLSAFVSHAAASRDWGDVSSPTAATPEAIGETGAGCLAGGVRLPPEGEGY 60 Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 +VM ++ R +GHPDL+ I L + G + +GD+ P GG GH SHQTG+D Sbjct: 61 KVMHLERNRNYGHPDLIRSIIDLGHATAQGHWGELHVGDLSQPRGGPMRFGHRSHQTGID 120 Query: 119 VDIFLQLPKTRWTSAQLLRPQ--ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRI 176 D++ L +A LR A L++ D + LW +++ AA+D V RI Sbjct: 121 ADVWFALDPNLIRNADGLRSNIPAPSLLTPDQTRLNHMLWDIRHARVLETAARDPHVDRI 180 Query: 177 FVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQ-PLPPSGDGC 235 FVN IKQ+LC DR WLRK+RPW +H H H+RL CP DS +C Q PL P GDGC Sbjct: 181 FVNAHIKQELCRSVRGDRSWLRKIRPWHRHDDHFHMRLACPTDSPDCVPQKPLEP-GDGC 239 Query: 236 GAELQSWFEPPKPGTTKPEKKTP---PPLPPSCQALLD 270 A L W P P P LP C+A+L+ Sbjct: 240 DASLDWWLSLPPLRPLPDNHHGPAPSPALPRVCRAVLN 277 >UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16D60_ROSDO Length = 309 Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 119/208 (57%), Gaps = 4/208 (1%) Query: 37 IGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL-GMGTVLI 95 GS++ GC+ GA LP +Q MR + R + HP+ V F++ LS + G + + Sbjct: 65 FGSYAKGCVAGAAQLPETGPTWQAMRLSRNRNWAHPETVSFVKDLSRIAAQQPGWNGLYV 124 Query: 96 GDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDL-VSRDGKHVVST 154 GD+ P GG GHASHQ GLD DI+L+ P T + + R + + R+ V+ Sbjct: 125 GDLSQPRGGPMLSGHASHQIGLDADIWLR-PATNLSLSVAERENISSISLRRNAGAFVND 183 Query: 155 LWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRL 214 W P+ +++K AA D V RIF+ P K QLC A DR WLRK+RPWF H H HVRL Sbjct: 184 NWTPQHAAILKAAASDPRVARIFIFPGAKVQLCNTATGDRSWLRKIRPWFGHHYHFHVRL 243 Query: 215 RCPADSLECEDQPLPPSGDGCGAELQSW 242 CP+ S C DQ PP+GDGC A+ Q+W Sbjct: 244 SCPSGSTGCVDQTPPPAGDGC-ADAQAW 270 >UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 Tax=Aurantimonadaceae RepID=Q1YF26_MOBAS Length = 331 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/245 (40%), Positives = 135/245 (55%), Gaps = 12/245 (4%) Query: 36 SIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGM-GTVL 94 S G +S GC+ GA LP +Q MR + R +GHP+ + F++RLS + + G+ +L Sbjct: 50 SYGFYSKGCLAGAAQLPADGPTWQAMRLSRDRRYGHPNTIDFLERLSREAAARGVWPGLL 109 Query: 95 IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGK-HVVS 153 +GD+ GG GHASHQ GLD DI+LQ R + + V + G V Sbjct: 110 VGDISQARGGPMPSGHASHQIGLDADIWLQPMPARRLTPEAREDFPFRSVLKPGTFQVDD 169 Query: 154 TLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVR 213 +W LI++AA+D V RIFV+P IK++LC G +R WL KVRP++ H H HVR Sbjct: 170 RVWTSNYRDLIRMAAEDPRVQRIFVHPGIKKKLCETTGRERAWLNKVRPYYGHHEHFHVR 229 Query: 214 LRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPKPGTTKPEKKTPP----PLPPSC 265 L C S C +Q SGDGCG +L WF +PPKPG KP K PP +P +C Sbjct: 230 LFCQPGSPGCTEQRATGSGDGCG-DLDWWFDVALQPPKPG-GKPAKPKPPMMLADMPNAC 287 Query: 266 QALLD 270 + + + Sbjct: 288 RQVAN 292 >UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8M3_9GAMM Length = 317 Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 128/243 (52%), Gaps = 10/243 (4%) Query: 6 IALLALLASSASLAATP-----WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + L +L ++A+L+ P W PV + Q++GS +NGC +GA L + + + Sbjct: 40 LTLFLVLCATAALSKDPDKVNVWSMQRAPVGATPQAVGSAANGCQLGAQMLEAEGDGFIS 99 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + R++ P + ++R+ +V+ + +LIGD+ P GG GH+SHQ GLDVD Sbjct: 100 IRRWRNRFYSQPITLKLVRRVGQEVATMHGAKILIGDLSQPVGGEMPFGHSSHQNGLDVD 159 Query: 121 I-FLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 I F +P ++ P +D + +V LW+ + AA + RIFVN Sbjct: 160 IWFYAVPAGSQPDKEVEPPSMVDGAA---GTLVPGLWQAAYRDALYAAATFPETNRIFVN 216 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 P IK LC D +D WL K+RPW H +H HVRL CP S EC Q P GDGC A+L Sbjct: 217 PVIKAHLC-DTESDTRWLHKIRPWIGHDSHFHVRLNCPPGSPECVTQAAIPPGDGCDADL 275 Query: 240 QSW 242 W Sbjct: 276 YKW 278 >UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NYY0_HAEIN Length = 185 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL +V G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRVKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIF 177 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIF Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIF 184 >UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endopeptidase n=50 Tax=Rhizobiales RepID=B5ZWT7_RHILW Length = 358 Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 3/218 (1%) Query: 29 PVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQ-VSN 87 P G AQ IG ++ GC+ GA LP ++ MR + R +G+P ++ ++RLS V Sbjct: 52 PTQGPAQPIGFYAKGCMTGAVALPADGPTWEAMRLSRNRRWGNPAMISLLERLSQDGVKY 111 Query: 88 LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI-FLQLPKTRWTSAQLLRPQALDLVSR 146 G +L+GD+ P GG GHASHQ GLD D+ F +P R T+ + ++ + Sbjct: 112 AGWPGLLVGDIAQPRGGPMFNGHASHQIGLDADVWFTPMPARRMTAKEREDLPFTTMLQK 171 Query: 147 DGKHVVS-TLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQ 205 D V +W L+ LAA +V RIFVNPAIK+++C DR L K+RP + Sbjct: 172 DKFLTVDPNVWTQSRARLLMLAASYPEVERIFVNPAIKKKMCDTWTGDRTNLGKLRPEYG 231 Query: 206 HRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 H +H H+R++CPA + C Q +GDGC L WF Sbjct: 232 HDSHFHIRIKCPAGAAGCTPQAPVAAGDGCDKSLAWWF 269 >UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDN2_9RHOB Length = 297 Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 22/266 (8%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 ++ P S + GS+S GC+ G + + +QVMR + R +GHPD++ ++ LS V Sbjct: 33 LSLPSKQSPNAFGSYSKGCLAGGEEMLESGPTWQVMRLSRDRNWGHPDMITLLKNLSKSV 92 Query: 86 SN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQ--ALD 142 + + IGD+ P GG GHASHQ GLD DI++ LP Q R +++ Sbjct: 93 AKKTSWNGIYIGDISQPRGGPMISGHASHQLGLDADIWM-LPAKNLNLTQARRESISSIN 151 Query: 143 LVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRP 202 + S++ K ++ W E ++K+ A+D V RIFV K +C ++DWL+K+RP Sbjct: 152 IRSKN-KKTTNSNWTNEHVDVLKIFAKDPSVDRIFVTAPAKIYMCKHEVGNKDWLQKIRP 210 Query: 203 WFQHRAHMHVRLRCPADSLECEDQP-----LPPSGDGCGAELQSW----FEP-------- 245 ++ H H HVR++CP DS C+ Q L G GC L W EP Sbjct: 211 YWGHNFHFHVRIKCPKDSKLCKTQKPSVQYLSKGGTGCDETLNWWITKALEPVKIDPKKD 270 Query: 246 PKPGTTKPEKKTPPPLPPSCQALLDE 271 P + LPP C ++L+ Sbjct: 271 KPKQKKHPTEYMMNELPPQCMSVLNN 296 >UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/Agrobacterium group RepID=B3PXK8_RHIE6 Length = 367 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 117/224 (52%), Gaps = 9/224 (4%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 ++ P G AQ IG ++ GC+ GA LP +Q MR + R +G+P + ++R S Sbjct: 49 VSLPTQGPAQPIGFYAKGCMTGAVALPTDGPTWQAMRLSRNRRWGNPVTIALLERFSQDA 108 Query: 86 SNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALDL 143 + G +L+GD+ P GG GHASHQ GLD DI+L +P R T+ + + L Sbjct: 109 AKYAGWPGILVGDIAQPRGGPMASGHASHQIGLDADIWLTPMPARRMTAEER---EDLPF 165 Query: 144 VSRDGKHVVSTL----WKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK 199 S K+ T+ W L+ LAA V RIFVNPAIK+++C DR L K Sbjct: 166 TSMLQKNKFLTIDPRVWTESHARLLMLAASYPQVERIFVNPAIKKKMCDTWTGDRTNLGK 225 Query: 200 VRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 +RP + H +H H+RL+CP C Q +GDGC L WF Sbjct: 226 LRPEYGHDSHFHIRLKCPPGVAGCTPQAPVAAGDGCDKSLAWWF 269 >UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WGM9_9RHIZ Length = 316 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 2/164 (1%) Query: 35 QSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVL 94 QSIG ++ GC+ GA LP ++QVMR + R +GHP ++ +++LS + G +L Sbjct: 118 QSIGFYAKGCLAGAVALPTDGPNWQVMRLSRNRRWGHPRMIGLLEKLSRDAAKDGWPGLL 177 Query: 95 IGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALDLVSRDGKHVVS 153 +GD+ P GG GHASHQ GLD DI+L +PK R+T A+ A+ ++ D +V Sbjct: 178 VGDISQPRGGPMLTGHASHQVGLDADIWLTPMPKKRFTDAERESVSAVSMLKPDSLYVDP 237 Query: 154 TLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWL 197 W P +LIK AA +R + + Q+ L G R L Sbjct: 238 KKWTPARTALIKHAASYPG-SRAHLRASRHQEGALRHGEGRQEL 280 >UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MP34_BDEBA Length = 518 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 27/220 (12%) Query: 34 AQSIGSFSNGCI-VGADTLPIQSEH----YQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL 88 +Q+IG + G + A+ L + H Y+++R ++ +F +L I ++ Sbjct: 307 SQAIGPVNAGRLQNAANMLTYEQAHAPTGYEIIRPKRKTHFATNELAYIIVKMGLLTKKE 366 Query: 89 GMGTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRD 147 G L +GD+ AGG+ G H SHQ GLD D+ S Q A+ + Sbjct: 367 IPGYELAVGDLSREAGGKL-GSHKSHQNGLDADVAFFF---NNKSFQGYFASAVAVNKPH 422 Query: 148 GKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW----------- 196 ++ WK L K + + RIF++ A+KQ LC A + + Sbjct: 423 ANWMLEPQWK-----LFKEVVGTQLIDRIFIHGALKQALCSHAIANGELTKGDNSSLAAQ 477 Query: 197 -LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGC 235 LR++ P H H H+R++C + C P + GC Sbjct: 478 TLRRLIPEKDHHNHFHLRVKCSKAQVRCRQMAEPVNTTGC 517 >UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella benthica KT99 RepID=A9DE24_9GAMM Length = 94 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 11/91 (12%) Query: 187 CLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW---- 242 CLD + WL KVRPW+ H+ HMHVRL C C++Q LP SG GC +L W Sbjct: 6 CLDCLYN--WLSKVRPWWGHKIHMHVRLSCAEGDKLCQNQNLPVSGTGC-EDLSWWKQQI 62 Query: 243 FEPPKPG-TTKPEKKTPPPL---PPSCQALL 269 +P K T+K +K+ P P+ P CQ LL Sbjct: 63 LQPKKSAQTSKDKKREPKPVKVKPELCQLLL 93 >UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHQ4_SORC5 Length = 303 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 9 LALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY 68 L L +A + ++P T P SIG +G I A LP Q Y+++R++ R+ Sbjct: 15 LVALCCAACVGSSP----TPLAPALRGSIGVPHHGVITDAVELPKQGPGYRLLRSNGIRW 70 Query: 69 FGHPDLVMFIQRLSSQVS--NLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 G LV +QR +++V+ G +++GD+ GG G H SH+TG D D+ L Sbjct: 71 -GTAGLVAAVQRAAAEVALARPGGAPLVVGDLSARYGGATRG-HRSHRTGRDADLLL 125 >UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM08_SORC5 Length = 350 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 25/199 (12%) Query: 36 SIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL-GMGTVL 94 S G+ + G + GA L S H + + R +G P LV ++R + QV+ G +L Sbjct: 116 SKGAPNRGRLTGAVRL-RSSRHLKTR--EGARTWGLPVLVKTLRRAAFQVAKKHGDSALL 172 Query: 95 IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV-- 152 +GD+ AGG +G H SHQTG D D+ + ++ + + R A D D + + Sbjct: 173 VGDLSARAGGALDG-HNSHQTGRDADVGFYVVNSKGKNLRTDRFVAFD----DEGNAIGL 227 Query: 153 --STLWKPEIFSLIKLAAQDKD--VTRIFVNPAIKQQLCLDAGTDR----------DWLR 198 + ++L++ +D+ V +FV A++ +L A R + Sbjct: 228 PGARFDDARNWALVQALLEDRQAGVKYLFVTDALRARLLAHAAKKRVPADLRARAAAAMM 287 Query: 199 KVRPWFQHRAHMHVRLRCP 217 R H H H+R+ CP Sbjct: 288 SPRDADLHNDHFHIRVMCP 306 >UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3P5_9DELT Length = 467 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 32/234 (13%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ++ A +SA++AA P + G+ S G + G IV LP + Y + + ++ Sbjct: 248 SVAASAGTSAAVAARPALPLVNIRRGAISS-GKPNRGKIVNGLQLPENPKLYTIRKPEES 306 Query: 67 RYFGHP--DLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ 124 H +L + I G ++IG + GGR H+SHQ+G DVDI L Sbjct: 307 YGSTHTLHNLQLAIANFRQDTGY--TGAIVIGAISKKGGGRLRP-HSSHQSGRDVDIRLP 363 Query: 125 LPK-TRWTSAQ------------LLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDK 171 + + T AQ L+R AL +ST + + K A K Sbjct: 364 VKAGIKGTLAQDSSEVDWDATWGLIR--ALVATGEIQYIFLSTSRQKHLLKAAKRAGASK 421 Query: 172 D-VTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECE 224 D + R+ +P AGT+ +R + H +H H+R C ++ CE Sbjct: 422 DMLERVIQHP-------RKAGTNHGIVRHAK---GHTSHFHIRFTCASNESHCE 465 >UniRef50_A9FG49 Putative penicillin-insensitive murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG49_SORC5 Length = 410 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 38/200 (19%) Query: 36 SIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGT--V 93 S+G+ + G + +P + + ++++ D +G + + + R ++V G+ + Sbjct: 117 SLGATNAGALFNGVRMP-EGDRWELV--DPAHAWGTRETIDALDRAIAEVHRQFPGSPKL 173 Query: 94 LIGDMGMPAGGRFNGGHASHQTGLDVDI-FLQLPKTRWTSAQLLRPQALDLVSRDGKHVV 152 IG + GGR + H SHQ G DVDI + + RW + Sbjct: 174 YIGHISAREGGRLSP-HKSHQAGRDVDISYFLDARHRWYQ----------------RATA 216 Query: 153 STLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL---CLDAGTDRDWL--------RKVR 201 + L + ++ ++ + DV I ++ ++++ L L G D+DWL RK R Sbjct: 217 ANLDRERTWAFVRALVTETDVELILIDSSVQRLLKEHALKIGEDKDWLDEVFQLGSRKPR 276 Query: 202 PWFQ----HRAHMHVRLRCP 217 P + H H+HVR P Sbjct: 277 PLIRHARGHANHIHVRFYSP 296 >UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0F0_9DELT Length = 339 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 40/216 (18%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMF----IQRLSSQVSNL 88 + QS G ++G + LP S HY +R R + LV I R Q + Sbjct: 140 TGQSRGRPTHGWLHDPSRLP-HSSHY--LRRRPERTYASAHLVDHTLNAIDRARDQ--HP 194 Query: 89 GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI---FLQLPKTRWTSAQLLRPQALDLVS 145 G+ + IGD+ GG +G H SHQ+G D+DI + Q P P+ + Sbjct: 195 GLHRLAIGDLSDEDGGPLSG-HHSHQSGRDIDIGFYYRQRPAN--------YPKEFARAT 245 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQ 205 +D +T W + +L++ + +D V +IF++ ++ L A D +++R FQ Sbjct: 246 KDNLDADAT-W-ALVEALVRTSGKDGGVEKIFLDYEVQGWLYAAARKDGWSKKRLREVFQ 303 Query: 206 -----------------HRAHMHVRLRCPADSLECE 224 H H+HVR RC C+ Sbjct: 304 YPDGRYAKHGMIRHEPKHDDHLHVRFRCVDADESCK 339 >UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH2_HALO1 Length = 377 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 84/218 (38%), Gaps = 38/218 (17%) Query: 28 QPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN 87 +PV G QS+GS G +V LP +Y R R +G + I+R + V N Sbjct: 175 RPVAG--QSVGSVVRGRLVNGMQLPEGRGYY---RRRPHRAWGASHTIHHIRRAIASVRN 229 Query: 88 L--GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT-RWTSAQLLR--PQALD 142 + V IGD+ GG+ H SHQ+G DVDI L K R +R Q LD Sbjct: 230 RLPKVHEVAIGDISTHDGGQL-ADHRSHQSGRDVDIGLYYKKRPRGYPKSFIRGDQQNLD 288 Query: 143 LVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRP 202 L W I +L + V +F++ ++ L A RK+ Sbjct: 289 L---------QATW-ALIEALANTSKVAGGVDIMFLDYDLQGHLYKWAKKHGVSKRKLGE 338 Query: 203 WFQ-----------------HRAHMHVRLRCPADSLEC 223 Q H H+HVR +CP +C Sbjct: 339 ILQYPRGESSASGLVRHEPGHATHVHVRFKCPKSDEKC 376 >UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G007_9DELT Length = 285 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 36/189 (19%) Query: 69 FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT 128 +G +LV ++R + +V + T+ + D+ GG+ + HASHQ+G DVD+ Sbjct: 63 WGTTELVGMVERAAGKVRDQKRATLGVADLSPKRGGK-SIWHASHQSGRDVDLIFYTVDE 121 Query: 129 RWTSAQLLRPQALDLVSRDG-------KHVVST-----LWKPEIFS------LIKLAAQD 170 R + P +++V DG +H+ +T W+ F LI+ D Sbjct: 122 R---GKTQPPPEVEMVHFDGSGEPFIPRHMRTTGYEEPTWETRRFDDARNWLLIEALLSD 178 Query: 171 K--DVTRIFVNPAIKQQLCLDAGTD----------RDWLRKVRPWFQHRAHMHVRLRCP- 217 + V IFV+ A++ ++ A R+ +R+ H H HVR+ C Sbjct: 179 RAVRVQWIFVSNALEARMLRWAERHDRPRWLIEYGREIMRQPGASAPHDDHFHVRVYCSR 238 Query: 218 AD-SLECED 225 AD +L CED Sbjct: 239 ADRALGCED 247 >UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7X3_9DELT Length = 610 Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 42/215 (19%) Query: 27 TQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY------FGHPDLVMFIQR 80 T V A S+GS +NG I A P + Y+ RRY GH + Sbjct: 394 TFEVREDAVSVGSPNNGSIENAIQFPRNDDLYK------RRYPNIMWCGGHMAKHLQWAI 447 Query: 81 LSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL----L 136 S + + G +++ DM GG F H SHQ+G DVDI+L K + QL Sbjct: 448 ASFRYNYEFEGEIVVADMSKKKGGHFPP-HKSHQSGRDVDIWLPTLKGVYKKNQLNDRDY 506 Query: 137 RPQA-----------LDLVSRDGK-HVVSTLWK--PEIFSLIK-LAAQDKDVTRIFVNPA 181 RPQ+ L + G+ H V ++ ++ K + A D+++ + P Sbjct: 507 RPQSEEADWFALYGFLQALHETGEVHAVFLAYELHDRVYQAAKIMGATDEELDAMIAYPR 566 Query: 182 IKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRC 216 + R L + P H H+HVR +C Sbjct: 567 GEHH--------RKSLLQHSPGHTH--HVHVRFKC 591 >UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZJ3_9DELT Length = 435 Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 22/148 (14%) Query: 91 GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQL------------PKTRWTSAQLLRP 138 G V++G + P G RF H SHQTG DVDI L L + W + L Sbjct: 273 GEVIVGSVSRPHGRRFPP-HRSHQTGRDVDIRLPLLPWFTPHVEPAEEEVDWRALWGLID 331 Query: 139 QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLR 198 L + + + +P ++ + + A +++ I P D G + +R Sbjct: 332 AFLATGQVEMIFLDHYMQRPLYYAALSMGATPEELDEIITWPR------RDGGKGKKIIR 385 Query: 199 KVRPWFQHRAHMHVRLRCPADSLECEDQ 226 + H H+HVR+RC + +C + Sbjct: 386 HSK---GHEGHIHVRIRCGPEEPDCRTR 410 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95... 417 e-115 UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63... 379 e-104 UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35... 376 e-103 UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae ... 356 5e-97 UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18... 353 3e-96 UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae ... 351 2e-95 UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus R... 346 6e-94 UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endop... 338 1e-91 UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endop... 337 3e-91 UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, puta... 335 8e-91 UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endop... 332 7e-90 UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endop... 330 5e-89 UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endop... 317 3e-85 UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endop... 316 4e-85 UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, tru... 315 7e-85 UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum Re... 315 8e-85 UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endop... 315 8e-85 UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/A... 315 1e-84 UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endop... 312 1e-83 UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endop... 311 1e-83 UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 ... 308 2e-82 UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 ... 306 4e-82 UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 ... 303 4e-81 UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS ... 302 7e-81 UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 ... 295 1e-78 UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hom... 294 2e-78 UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopime... 286 8e-76 UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16... 284 3e-75 UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 ... 229 1e-58 UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 ... 193 5e-48 UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus ... 186 6e-46 UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacific... 156 6e-37 UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 T... 154 3e-36 UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacific... 145 2e-33 UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium ... 140 6e-32 UniRef50_A9FG49 Putative penicillin-insensitive murein endopepti... 136 7e-31 UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendope... 116 7e-25 UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 ... 102 1e-20 Sequences not found previously or not previously below threshold: UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 ... 114 4e-24 UniRef50_D0LT36 Putative uncharacterized protein n=1 Tax=Haliang... 113 7e-24 UniRef50_Q08Y50 LysM domain protein n=1 Tax=Stigmatella aurantia... 112 2e-23 UniRef50_A6GFS7 LysM domain protein n=1 Tax=Plesiocystis pacific... 108 2e-22 UniRef50_A0LM11 Peptidoglycan-binding LysM n=1 Tax=Syntrophobact... 108 3e-22 UniRef50_A9G844 Putative exported endopeptidase n=1 Tax=Sorangiu... 105 1e-21 UniRef50_A6G2U1 LysM domain protein n=1 Tax=Plesiocystis pacific... 105 2e-21 UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacific... 103 5e-21 UniRef50_A6FXN2 LysM domain protein n=1 Tax=Plesiocystis pacific... 103 6e-21 UniRef50_A6GFI1 LysM domain protein n=1 Tax=Plesiocystis pacific... 100 4e-20 UniRef50_D0LSR2 Putative uncharacterized protein n=1 Tax=Haliang... 100 5e-20 UniRef50_Q1D9Z6 LysM domain protein n=1 Tax=Myxococcus xanthus D... 99 2e-19 UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacific... 88 3e-16 UniRef50_A0YMI6 Carboxypeptidase n=1 Tax=Lyngbya sp. PCC 8106 Re... 82 2e-14 UniRef50_A9AWE1 Peptidoglycan-binding domain 1 protein n=2 Tax=H... 77 5e-13 UniRef50_C4DNK9 Putative peptidoglycan-binding domain-containing... 67 6e-10 UniRef50_Q1N8Y8 TraG n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Y8... 67 6e-10 UniRef50_Q21G72 Putative uncharacterized protein n=2 Tax=Alterom... 66 1e-09 UniRef50_C7R9R6 Putative uncharacterized protein n=1 Tax=Kangiel... 63 8e-09 UniRef50_UPI0001B561AE peptidoglycan binding domain-containing p... 61 5e-08 UniRef50_A4EZ49 Putative uncharacterized protein n=3 Tax=Roseoba... 57 7e-07 UniRef50_A9GTP3 Putative uncharacterized protein n=1 Tax=Sorangi... 56 1e-06 UniRef50_B2IYA7 Putative uncharacterized protein n=2 Tax=Cyanoba... 52 3e-05 UniRef50_A6GGI0 Putative uncharacterized protein n=1 Tax=Plesioc... 45 0.003 UniRef50_A9DVV8 Putative transmembrane protein n=1 Tax=Kordia al... 45 0.004 >UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95 Tax=Enterobacteriaceae RepID=MEPA_ECOL5 Length = 274 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 271/274 (98%), Positives = 271/274 (98%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV Sbjct: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MRTDQRRYFGHPDLVMFIQRLS QVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD Sbjct: 61 MRTDQRRYFGHPDLVMFIQRLSRQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV TLWKPEIFSLIKLAAQDKDVTRIFVNP Sbjct: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVPTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPP GDGCGAELQ Sbjct: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI Sbjct: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 >UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63 Tax=Enterobacteriaceae RepID=MEPA_YERPA Length = 275 Score = 379 bits (973), Expect = e-104, Method: Composition-based stats. Identities = 190/272 (69%), Positives = 220/272 (80%), Gaps = 1/272 (0%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 M + ++AL+ +AATPWQKIT PV GS QSIG F+NGC++GA LP++S YQV Sbjct: 1 MKNWIVGMVALVTMVPVMAATPWQKITHPVAGSPQSIGGFANGCVIGAQPLPLESADYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MR+DQRRYFGHPDL+ FI RLS+Q +GTVLIGDM MPAGGRF+ GHASHQ+GLDVD Sbjct: 61 MRSDQRRYFGHPDLLNFIHRLSAQAHQQQLGTVLIGDMAMPAGGRFSSGHASHQSGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 I+LQLPK RW+ QLL+PQ +DLV+ DGK V+ LW+P+I SLIKLAA+D DVTRIFVNP Sbjct: 121 IWLQLPKQRWSQQQLLKPQPIDLVAVDGKRVIPALWQPQIESLIKLAAKDNDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIK+QLCLDAG DR WL KVRPWF HRAHMHVRLRCPA+SLEC DQ PP GDGCGAEL+ Sbjct: 181 AIKKQLCLDAGADRQWLHKVRPWFAHRAHMHVRLRCPANSLECVDQDTPPPGDGCGAELE 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEH 272 SWF+PP P + KP K PPPLPPSCQALLD H Sbjct: 241 SWFQPPPP-SAKPGKTLPPPLPPSCQALLDNH 271 >UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35 Tax=Pasteurellaceae RepID=MEPA_HAEIN Length = 286 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 133/273 (48%), Positives = 178/273 (65%), Gaps = 3/273 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL + G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRAKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIFVN Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIFVN 186 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 PAIK +LC AG DR WL K+RPW H +H HVRL CPAD+ CE+Q P+GDGCG EL Sbjct: 187 PAIKVKLCQTAGNDRGWLHKIRPWHGHNSHFHVRLTCPADASYCENQAPVPAGDGCGDEL 246 Query: 240 QSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEH 272 SWFEPPKPGT+ + K PP P CQ +L+ Sbjct: 247 YSWFEPPKPGTSVSKPKVTPPEPFLCQQILNSP 279 >UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICV4_VIBHO Length = 280 Score = 356 bits (913), Expect = 5e-97, Method: Composition-based stats. Identities = 111/270 (41%), Positives = 156/270 (57%), Gaps = 4/270 (1%) Query: 6 IALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQ 65 I + + S A A PW+K+ P PG+ +SIGS++NGC+ G LP++ E YQV+R + Sbjct: 11 ICMFLIGFSMAVAQANPWEKVQAPYPGAEKSIGSYANGCLSGGVALPLKGEGYQVIRPSR 70 Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQL 125 RY+GHP ++ ++ +L+ + G+ ++I D+ MP GG F GH+SHQTGLD DI+L Sbjct: 71 NRYYGHPAMIAYLTKLARKTKGFGLDDLMIADIAMPRGGNFTQGHSSHQTGLDADIWLSF 130 Query: 126 PKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQ 185 T L P A+ +V + W E L ++AA + +V RIFV+P IK+ Sbjct: 131 APESLTRDSLESPVAVSMVDLQNYALKRDNWMKEHAILFQVAASEPEVARIFVHPVIKET 190 Query: 186 LCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW--- 242 LC A DR WLRKVRPW+ H HMH+RL+CP S+ C Q PP+GDGCGAEL SW Sbjct: 191 LCDMAWEDRRWLRKVRPWWGHHYHMHIRLQCPEGSVNCIAQNTPPAGDGCGAELISWRPT 250 Query: 243 -FEPPKPGTTKPEKKTPPPLPPSCQALLDE 271 + K +KK P C +L + Sbjct: 251 SADRQKTVAATAKKKRVKIKPGQCDVVLAQ 280 >UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18 Tax=Vibrionales RepID=B7VJP4_VIBSL Length = 279 Score = 353 bits (906), Expect = 3e-96, Method: Composition-based stats. Identities = 111/277 (40%), Positives = 155/277 (55%), Gaps = 9/277 (3%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 LAL+ S ++AT W+K P S SIGS++NGC+ GA LPI + YQV+R Sbjct: 2 RLFCTLALIFCSFVVSATSWEKEKSPTRNSTSSIGSYANGCLDGAQALPINGQGYQVIRP 61 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 + RY+GH + + FI+RL S +L+GD+ +P GGRF+ GH+SHQTGLD+DI+L Sbjct: 62 QRERYYGHTESIQFIERLGLTTSKQLNTNLLVGDISLPRGGRFSSGHSSHQTGLDIDIWL 121 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 +L + + +L P+ L +V + + W + F +I+ AA+D+ V RIFV+P IK Sbjct: 122 RLTDKKLSENELAVPKPLSVVDLTNYKLRESNWTDDHFQVIRYAAKDEKVVRIFVHPVIK 181 Query: 184 QQLCLDAGTD---RDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 LC +D R WL K+RPW+ H +H HVRL+CP S C Q PP GDGCG EL Sbjct: 182 HTLCEQENSDANGRAWLGKIRPWWGHHSHFHVRLKCPKGSSNCIAQASPPKGDGCGDELA 241 Query: 241 SWFEPPKPGTTKPEKKTP------PPLPPSCQALLDE 271 SW P + +P C AL+ Sbjct: 242 SWAPKTIPVPPPKKVAKSKKKKRVNVMPSQCLALISN 278 >UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae RepID=B8K7B3_VIBPA Length = 285 Score = 351 bits (900), Expect = 2e-95, Method: Composition-based stats. Identities = 130/269 (48%), Positives = 178/269 (66%), Gaps = 7/269 (2%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ALL +L S + A+PW+++TQP + QSIGS++NGC+ G +LP+ + YQV+R+ + Sbjct: 13 ALLLILVFSPAH-ASPWEQVTQPSSQAPQSIGSYANGCLAGGASLPLSGDGYQVIRSQRA 71 Query: 67 RYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP 126 RY+GHPD + FIQRL + +LIGDM +P GGRF+ GH+SHQTGLD+DI+L+L Sbjct: 72 RYYGHPDAIGFIQRLGALSQQQLSTHILIGDMSLPQGGRFSSGHSSHQTGLDIDIWLKLA 131 Query: 127 KTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL 186 + QL P+ L +V+ + ++ W P F L+KLAA D+ V RIFV+P IK++L Sbjct: 132 DEPLSQTQLAEPKPLSVVNIEQYQLLKNNWNPRHFELVKLAASDEQVARIFVHPVIKEKL 191 Query: 187 CL-DAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP 245 C + +DR WLRKVRPW+ H HMHVRL+CP DS C+ Q PP GDGCGAEL SW Sbjct: 192 CASEQASDRAWLRKVRPWWGHHYHMHVRLKCPQDSRHCKPQAAPPQGDGCGAELASWKPQ 251 Query: 246 PKP-----GTTKPEKKTPPPLPPSCQALL 269 PKP + K +KK+P +P C+ LL Sbjct: 252 PKPAAPKAASVKAKKKSPKVMPEQCRQLL 280 >UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus RepID=Q7MNJ8_VIBVY Length = 276 Score = 346 bits (887), Expect = 6e-94, Method: Composition-based stats. Identities = 114/256 (44%), Positives = 163/256 (63%), Gaps = 3/256 (1%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 +L T W+ +T P AQSIGS++NGC+ G LP++ YQV+RT++ RYF HP+ V Sbjct: 19 ALQMTAWELVTAPTRERAQSIGSYANGCLDGGVALPLEGAGYQVVRTERNRYFAHPETVN 78 Query: 77 FIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL 136 FIQ L T++I D+ +P GGRF+ GHASHQTGLD+D++L+L + +L Sbjct: 79 FIQELGYYADTHLASTLMIADVSLPRGGRFSFGHASHQTGLDIDVWLKLNTSPLNKYELE 138 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLC-LDAGTDRD 195 + + +V+ D + + W+ E F LI+ AA++ V RIFV+ IKQ+LC ++ T R Sbjct: 139 QAKTESVVNFDTMTIRADEWRDEQFELIRAAAENGRVARIFVHAVIKQRLCQMETSTHRS 198 Query: 196 WLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK 255 WLRKVRPW+ H +HMHVRL CP S +C +Q LPP GDGCG E+ SW E P P K ++ Sbjct: 199 WLRKVRPWWGHSSHMHVRLSCPQGSDDCIEQALPPEGDGCGEEVLSWIERPTPTAKKAQE 258 Query: 256 KTPPPLPPSCQALLDE 271 P P+ +C +L++ Sbjct: 259 --PEPISEACVTVLNQ 272 >UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LE77_TOLAT Length = 265 Score = 338 bits (867), Expect = 1e-91, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 142/257 (55%), Gaps = 2/257 (0%) Query: 16 ASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 + + PW P GSA++IG ++ GC+ GA LP YQ++R Q+R +GHP + Sbjct: 7 VAAMSNPWAHQVTPSTGSAEAIGGYAAGCLQGAVALPEHGTGYQILRPRQKRIYGHPIMQ 66 Query: 76 MFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL 135 ++ L+ Q G+ +L+GDM M GG F+ GH SHQ+GLD D + + ++ Sbjct: 67 QYVLDLARQSKKAGLPDILVGDMAMAKGGPFSSGHRSHQSGLDTDFWFRFAAKPLSARTR 126 Query: 136 LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG-TDR 194 + LD+V V + +L+KLAAQD V RIFVNP IKQ +C G TD Sbjct: 127 NTIKPLDMVDFRRNKVNKNF-GQQQVTLLKLAAQDPRVERIFVNPPIKQAMCDQFGATDP 185 Query: 195 DWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPE 254 WL K+RPWF H AH HVRL CP S +CE Q P G GCGAELQSW P ++KP Sbjct: 186 TWLGKLRPWFGHSAHFHVRLHCPVGSKDCEPQKPYPEGSGCGAELQSWLTKPAMVSSKPL 245 Query: 255 KKTPPPLPPSCQALLDE 271 P LP C+ LL Sbjct: 246 PNRMPDLPDRCEILLSN 262 >UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDV9_CHRVI Length = 289 Score = 337 bits (864), Expect = 3e-91, Method: Composition-based stats. Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 8/278 (2%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + + + L+L + ++ ATPW + +P G + G +NGCI GAD LP Y Sbjct: 12 LGRRVVLALSLCLPTLTVLATPWGDVQRPSSGLTEVFGGAANGCIGGADALPETGPGYVS 71 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + RY+GHPDL+ F+ L G V+IGD+ P GGR + H SHQ GLDVD Sbjct: 72 IRRYRNRYYGHPDLIRFVHDLGRGQQQRGSQFVMIGDLSQPRGGRMSSSHRSHQNGLDVD 131 Query: 121 IFLQLPKTRWTSAQL--LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 ++ L + + QL R +V+ G VS W F+LI+ AA+ V RIFV Sbjct: 132 VWFTLANSPTAARQLMDDRADPASMVAP-GGRTVSRHWGASQFALIESAARHPRVDRIFV 190 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAE 238 N AIKQ+LC A DR WLRKVRPW+ H AH HVRL CPADS CEDQ P GDGCG + Sbjct: 191 NAAIKQELCQSARGDRAWLRKVRPWWGHDAHFHVRLACPADSPSCEDQSPVPPGDGCGED 250 Query: 239 LQSWFEPPKP-----GTTKPEKKTPPPLPPSCQALLDE 271 L W K + P +P +C+A+L + Sbjct: 251 LAWWLSDEVLSGRARSKGKTTRAAEPEMPFACRAVLTD 288 >UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUQ4_SHEPW Length = 289 Score = 335 bits (860), Expect = 8e-91, Method: Composition-based stats. Identities = 104/245 (42%), Positives = 144/245 (58%), Gaps = 1/245 (0%) Query: 9 LALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY 68 ALL S+ A PW+++ P G A ++GS++NGC+ G LP ++V+R ++RRY Sbjct: 20 AALLLFSSITFANPWEQVNSPFDGVAAAVGSYANGCLAGGKALPSSGPGFEVIRPERRRY 79 Query: 69 FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT 128 FGHP L+ FI+ SS +LI DM MP GG F GH+SHQ GLDVDI+ +L + Sbjct: 80 FGHPTLISFIEDYSSHFRQYSKSNLLIADMSMPRGGNFTHGHSSHQIGLDVDIWFKLAEQ 139 Query: 129 RWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCL 188 T QL +P+ D+V + S LW+ + +++LAA+D V RIF++P IKQ LC Sbjct: 140 ALTVMQLAQPEPFDIVHTKQFRLDSKLWQAQHTRMVQLAAEDSRVARIFISPVIKQHLCD 199 Query: 189 DAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKP 248 + WL KVRPW+ H HMHVRL CP D ++C +Q P G+GC EL W + Sbjct: 200 MDLANDAWLNKVRPWWGHTYHMHVRLHCPEDDVDCIEQAPIPKGNGCN-ELSWWKQQYTQ 258 Query: 249 GTTKP 253 KP Sbjct: 259 PKLKP 263 >UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endopeptidase n=2 Tax=Shewanella RepID=B0TS44_SHEHH Length = 298 Score = 332 bits (852), Expect = 7e-90, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 156/273 (57%), Gaps = 10/273 (3%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 AI L LL SSA++ A W+ P A +IGS++NGC+ GA+ LP+ YQV+R Sbjct: 24 LAIVGLNLLVSSAAI-ANLWEAADTPYVSQASAIGSYANGCLKGAEALPLNGNGYQVIRP 82 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 ++RY+GHP+L+ FI++ S+ ++ LG +LI DM MP GG F GH SHQ GLDVDI+L Sbjct: 83 QRQRYYGHPELIEFIEQYSTSLNRLGSDDILIADMSMPRGGNFTQGHTSHQIGLDVDIWL 142 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 +L ++ +P L LV++ + + LW ++KLAAQD V RIFV+P IK Sbjct: 143 KLTAEPLLDSEREQPTPLKLVNQKQFKLDTQLWSNTQTQMVKLAAQDARVARIFVSPVIK 202 Query: 184 QQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 Q LC D WL KVRPW+ H HMHVRLRCP C +Q P G+GC +EL W Sbjct: 203 QHLCDLGLDDDAWLEKVRPWWGHTYHMHVRLRCPKGDEFCREQAKIPKGNGC-SELSWWR 261 Query: 244 EPPKPGT--------TKPEKKTPPPLPPSCQAL 268 + KP++ P C+A+ Sbjct: 262 QRLTQAKVAKVEKPKVKPKQVKAKRKPKLCEAV 294 >UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KR39_SHEWM Length = 278 Score = 330 bits (845), Expect = 5e-89, Method: Composition-based stats. Identities = 110/235 (46%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 + +A PW ++ QP GS+ +IGS+SNGC+ G L + E +QV+RT ++RY+GH DLV Sbjct: 18 AASANPWARVEQPFTGSSDAIGSYSNGCLSGGVGLASEGEGFQVIRTSRKRYYGHADLVN 77 Query: 77 FIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL 136 FI ++ + G+ +LIGDM MP GG F GH SHQ GLDVDI+L+ + T+ ++ Sbjct: 78 FINEYAATLKQAGLDDLLIGDMSMPRGGHFTSGHRSHQIGLDVDIWLRQANRKLTAQEIE 137 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 P+ LD+V+R V + W +I+LAA DK V RIFV+P IKQQLC A W Sbjct: 138 NPKKLDVVNRKAFKVNAN-WSGAHGVMIRLAALDKRVARIFVHPVIKQQLCSQAEQGSSW 196 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTT 251 L+KVRPW+ H +HMH+RL+CP +S CE Q LPP GDGC EL W E Sbjct: 197 LQKVRPWWGHSSHMHIRLKCPDNSQLCEGQDLPPEGDGCD-ELSWWQEQMSAPKK 250 >UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endopeptidase n=13 Tax=Alphaproteobacteria RepID=B0UCG4_METS4 Length = 311 Score = 317 bits (812), Expect = 3e-85, Method: Composition-based stats. Identities = 108/259 (41%), Positives = 150/259 (57%), Gaps = 8/259 (3%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 A + + T P AQ+IGS++ GC+ GA+ LP +QVMR + R +GHP LV F+ Sbjct: 50 AKALFGRATTPASLPAQAIGSYARGCVAGAEALPTNGPTWQVMRLSRNRNWGHPVLVAFL 109 Query: 79 QRLSSQV-SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQLL 136 +R++S+ G +L+GDM P GG GHASHQ GLD D++L +P + A+ Sbjct: 110 ERIASKAPGRAGWPGLLVGDMSQPRGGPMLTGHASHQLGLDADVWLTPMPDRTLSRAERE 169 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 A ++V D + + +W+PE LI++ A+ +V RIFVNPAIK LC +AG++R W Sbjct: 170 EISATNVVRADRRDIDPAVWRPEHGRLIRMVAEQPEVARIFVNPAIKLALCREAGSERRW 229 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE------PPKPGT 250 L KVRP + H H H+RL CP+ C+DQ PPSGDGCGAEL WF P P Sbjct: 230 LTKVRPMYGHNYHFHIRLECPSGDHACKDQEPPPSGDGCGAELDYWFSDAVLNPKPGPKG 289 Query: 251 TKPEKKTPPPLPPSCQALL 269 T LP +C+ +L Sbjct: 290 KPKPPMTMAALPEACRGVL 308 >UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEN3_9RHIZ Length = 491 Score = 316 bits (811), Expect = 4e-85, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 144/265 (54%), Gaps = 19/265 (7%) Query: 24 QKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSS 83 + +P P +A++IG +S GC+ GA+ LPI +Q MR + R +GHP L+ I+ + Sbjct: 160 GVVKKPAPLAARAIGYYSRGCLSGAEALPIDGPAWQEMRLSRNRNWGHPQLISLIKTFAD 219 Query: 84 QVSNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQLLRPQAL 141 G +L+GD+ P GG GHASHQ GLD DI+L +PK R T + A Sbjct: 220 DAQKQDGWPGLLVGDIAQPRGGPMITGHASHQVGLDADIWLTPMPKRRLTRKERETLNAT 279 Query: 142 DLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVR 201 ++ G V ++ + SLIK AA +V RIFV+PAIK+ LC AGTDR WL KVR Sbjct: 280 SMLDDTGVAVDPKVFTDKQVSLIKRAASYPEVERIFVHPAIKKALCTAAGTDRQWLGKVR 339 Query: 202 PWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE---PPKPGTTKPEKKTP 258 P++ H H H+R++CPAD C+ QP P DGCG E+ W P KP + P K P Sbjct: 340 PFYGHYYHFHMRIKCPADFAGCKPQPPPTGDDGCGKEVDQWLSKVIPAKPSMSPPIPKPP 399 Query: 259 P--------------PLPPSCQALL 269 LPP C+ALL Sbjct: 400 QSVSVRPPAPPIMLADLPPECRALL 424 >UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, truncation n=1 Tax=Methylococcus capsulatus RepID=Q607R5_METCA Length = 279 Score = 315 bits (808), Expect = 7e-85, Method: Composition-based stats. Identities = 101/277 (36%), Positives = 140/277 (50%), Gaps = 7/277 (2%) Query: 1 MNKTAIALLALLASSASLAA--TPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHY 58 M +AL +L++ S AA W ++ P + ++IG GC+ G LP + E Y Sbjct: 1 MPSNRLALFVVLSAFVSHAAASRDWGDVSSPTAATPEAIGETGAGCLAGGVRLPPEGEGY 60 Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 +VM ++ R +GHPDL+ I L + G + +GD+ P GG GH SHQTG+D Sbjct: 61 KVMHLERNRNYGHPDLIRSIIDLGHATAQGHWGELHVGDLSQPRGGPMRFGHRSHQTGID 120 Query: 119 VDIFLQLPKTRWTSAQLLRPQ--ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRI 176 D++ L +A LR A L++ D + LW +++ AA+D V RI Sbjct: 121 ADVWFALDPNLIRNADGLRSNIPAPSLLTPDQTRLNHMLWDIRHARVLETAARDPHVDRI 180 Query: 177 FVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCG 236 FVN IKQ+LC DR WLRK+RPW +H H H+RL CP DS +C Q GDGC Sbjct: 181 FVNAHIKQELCRSVRGDRSWLRKIRPWHRHDDHFHMRLACPTDSPDCVPQKPLEPGDGCD 240 Query: 237 AELQSWFEPPKPGTTKPEKKTP---PPLPPSCQALLD 270 A L W P P P LP C+A+L+ Sbjct: 241 ASLDWWLSLPPLRPLPDNHHGPAPSPALPRVCRAVLN 277 >UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum RepID=Q2W4C2_MAGSA Length = 280 Score = 315 bits (808), Expect = 8e-85, Method: Composition-based stats. Identities = 113/270 (41%), Positives = 146/270 (54%), Gaps = 6/270 (2%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 A +LA A++A W I QP G A IGS + GC+ GA L +QV+R Sbjct: 10 LAALVLATGAAAAESGQQQWSGIGQPATGPASVIGSPAAGCLKGAVPLAEDEHSFQVLRP 69 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLG-MGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIF 122 + R++GHP + F+ L+ G G +LIGDM P GG GH SHQ GLDVDI+ Sbjct: 70 SRNRHWGHPATIRFVGDLARATKGEGISGPLLIGDMAQPRGGPMPAGHGSHQNGLDVDIW 129 Query: 123 LQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAI 182 +LP + A++ P+ + +V G + W P L++LAA+ V RIFVNPAI Sbjct: 130 FRLPAKPLSRAEIETPKPVSMVY--GTEIDEDAWTPAQARLLELAARAPQVDRIFVNPAI 187 Query: 183 KQQLCLD--AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 K+ +C A DR WLRK+RPW+ H H HVRL CPADS +CE Q P GDGCG EL+ Sbjct: 188 KKAMCRAVPADGDRSWLRKLRPWWGHDEHFHVRLSCPADSPDCERQKPMPEGDGCGEELE 247 Query: 241 SWFEPPK-PGTTKPEKKTPPPLPPSCQALL 269 SW P P PLP +C L Sbjct: 248 SWSARPTWPAPPSRPHHQSRPLPEACAGLF 277 >UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endopeptidase n=50 Tax=Rhizobiales RepID=B5ZWT7_RHILW Length = 358 Score = 315 bits (808), Expect = 8e-85, Method: Composition-based stats. Identities = 93/276 (33%), Positives = 135/276 (48%), Gaps = 14/276 (5%) Query: 13 ASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHP 72 S A + + P G AQ IG ++ GC+ GA LP ++ MR + R +G+P Sbjct: 36 TPSPGSAKGQFGAVGLPTQGPAQPIGFYAKGCMTGAVALPADGPTWEAMRLSRNRRWGNP 95 Query: 73 DLVMFIQRLSSQ-VSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRW 130 ++ ++RLS V G +L+GD+ P GG GHASHQ GLD D++ +P R Sbjct: 96 AMISLLERLSQDGVKYAGWPGLLVGDIAQPRGGPMFNGHASHQIGLDADVWFTPMPARRM 155 Query: 131 TSAQLLRPQALDLVSRDGK-HVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD 189 T+ + ++ +D V +W L+ LAA +V RIFVNPAIK+++C Sbjct: 156 TAKEREDLPFTTMLQKDKFLTVDPNVWTQSRARLLMLAASYPEVERIFVNPAIKKKMCDT 215 Query: 190 AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPG 249 DR L K+RP + H +H H+R++CPA + C Q +GDGC L WF P Sbjct: 216 WTGDRTNLGKLRPEYGHDSHFHIRIKCPAGAAGCTPQAPVAAGDGCDKSLAWWFTPAPWA 275 Query: 250 TTKPEKKTP-----------PPLPPSCQALLDEHVI 274 KP K LP +C A+LD + Sbjct: 276 PPKPPKPGAKPPKPPREMMVSDLPKACAAVLDAASV 311 >UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/Agrobacterium group RepID=B3PXK8_RHIE6 Length = 367 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 130/276 (47%), Gaps = 14/276 (5%) Query: 13 ASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHP 72 S A + ++ P G AQ IG ++ GC+ GA LP +Q MR + R +G+P Sbjct: 36 TPSPGSAKALFGGVSLPTQGPAQPIGFYAKGCMTGAVALPTDGPTWQAMRLSRNRRWGNP 95 Query: 73 DLVMFIQRLSSQVSN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRW 130 + ++R S + G +L+GD+ P GG GHASHQ GLD DI+L +P R Sbjct: 96 VTIALLERFSQDAAKYAGWPGILVGDIAQPRGGPMASGHASHQIGLDADIWLTPMPARRM 155 Query: 131 TSAQLLRPQALDLVSRDGK-HVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD 189 T+ + ++ ++ + +W L+ LAA V RIFVNPAIK+++C Sbjct: 156 TAEEREDLPFTSMLQKNKFLTIDPRVWTESHARLLMLAASYPQVERIFVNPAIKKKMCDT 215 Query: 190 AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----- 244 DR L K+RP + H +H H+RL+CP C Q +GDGC L WF Sbjct: 216 WTGDRTNLGKLRPEYGHDSHFHIRLKCPPGVAGCTPQAPVAAGDGCDKSLAWWFTPAPWA 275 Query: 245 ------PPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 P + LP +C A+LD + Sbjct: 276 PPKPPKPDAKPPKPSREMMVSDLPKACAAVLDAASV 311 >UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBB0_RHOVA Length = 317 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 103/264 (39%), Positives = 144/264 (54%), Gaps = 12/264 (4%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 A + I P Q+IG + GC+ GA + + + +Q MR + RY+GHP L+ +I Sbjct: 41 AKKAFGAIKVPPALPPQAIGRYDLGCVAGAQKIAMNGDGWQAMRLSRNRYWGHPALISYI 100 Query: 79 QRLSSQVSN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLL 136 + L+ V G+ +L+GDM P GG GGHASHQ+G+DVD++ +P ++ Sbjct: 101 ETLARDVKRLDGLPGILVGDMAQPIGGPLLGGHASHQSGIDVDLWYNLMPARTLSAEDRE 160 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 + A + V + V W L+K AA +V+RIFV+PAIK+ LC AG+DR W Sbjct: 161 KFAATNYVDQTTLTVDPARWTDAQTKLVKRAASYPEVSRIFVHPAIKKALCDSAGSDRVW 220 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKK 256 L+K+RPW++H H+HVRL CPA S C QP + DGCG EL +WF + KP K Sbjct: 221 LQKIRPWYKHDDHLHVRLSCPAGSNGCVSQPAIKADDGCGEELDAWFRKLRAPRPKPPKP 280 Query: 257 TP----------PPLPPSCQALLD 270 LP CQALLD Sbjct: 281 PKPQPKPKPMLVTDLPGECQALLD 304 >UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD59_RHOVA Length = 427 Score = 311 bits (797), Expect = 1e-83, Method: Composition-based stats. Identities = 102/274 (37%), Positives = 141/274 (51%), Gaps = 15/274 (5%) Query: 16 ASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 A+ A + +P +S+G ++ GC+ GA LP +Q MR + R++G+P LV Sbjct: 149 ATPAKLLFGAAREPAKMETRSVGFYAKGCLAGAAQLPENGPVWQGMRVSRNRHWGNPVLV 208 Query: 76 MFIQRLSSQVS-NLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQ 134 FI++ + G +LIGDM MP GG GHASHQ GLDVDI+ + R + Sbjct: 209 TFIEKFAKDAKAKDGWPGLLIGDMSMPRGGPMPFGHASHQVGLDVDIWYKPMPGRTLAVD 268 Query: 135 LLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDR 194 +D V D HV W P+ L++ A +VTR+FVNPAIK+ +C + DR Sbjct: 269 EREQMKMDSVLLDPVHVNEQSWTPDHVKLLRRAVSYPEVTRVFVNPAIKKWMCDNVTDDR 328 Query: 195 DWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPKPGT 250 +L K++P H AH HVRL CPA C +QP P+GDGCG L W +P P Sbjct: 329 GFLHKIQPIMGHDAHFHVRLACPAGDEGCRNQPPLPAGDGCGGGLDKWIAKLSKPVVPVA 388 Query: 251 TKPEKKTPPP----------LPPSCQALLDEHVI 274 KP + P LPP+C A+L+ I Sbjct: 389 PKPAVASAPAKPKAGITMAQLPPACVAVLNAPSI 422 >UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 Tax=Aeromonas RepID=A0KJ73_AERHH Length = 260 Score = 308 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 136/240 (56%), Gaps = 1/240 (0%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 + +P P A++IG +S GC+ LP+ YQV+RT + RY+GHP+L+ ++ L++Q Sbjct: 20 LAEPHPRQAEAIGGYSAGCLKNGVALPLTGPGYQVIRTKRLRYYGHPELIAYLTTLANQT 79 Query: 86 SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVS 145 GM + I D+ M GG F GH SHQTGLD DI+ ++ ++ + P+ L+ Sbjct: 80 RMAGMPDLYIADLAMAHGGPFTSGHRSHQTGLDADIWFRMANQPISTWEQDAPKEWALID 139 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQ 205 V+ + P+ +L++LAA +V RIF+NP +K ++C A D W+ K+RPW Sbjct: 140 EPSYRVLPGRFGPQQLNLLRLAASKPEVARIFINPVLKAEVCKRA-PDEPWVGKLRPWVG 198 Query: 206 HRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSC 265 H +H HVRLRCPA S +C+ Q P G+GCGAEL SW + P LP C Sbjct: 199 HFSHFHVRLRCPAGSPDCQPQAPIPPGNGCGAELASWLKDKPQLPKVSMAYHKPRLPARC 258 >UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 Tax=Aurantimonadaceae RepID=Q1YF26_MOBAS Length = 331 Score = 306 bits (784), Expect = 4e-82, Method: Composition-based stats. Identities = 95/254 (37%), Positives = 134/254 (52%), Gaps = 10/254 (3%) Query: 30 VPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLG 89 + S G +S GC+ GA LP +Q MR + R +GHP+ + F++RLS + + G Sbjct: 44 AALPSASYGFYSKGCLAGAAQLPADGPTWQAMRLSRDRRYGHPNTIDFLERLSREAAARG 103 Query: 90 -MGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLLRPQALDLVSRD 147 +L+GD+ GG GHASHQ GLD DI+LQ +P R T ++ Sbjct: 104 VWPGLLVGDISQARGGPMPSGHASHQIGLDADIWLQPMPARRLTPEAREDFPFRSVLKPG 163 Query: 148 GKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHR 207 V +W LI++AA+D V RIFV+P IK++LC G +R WL KVRP++ H Sbjct: 164 TFQVDDRVWTSNYRDLIRMAAEDPRVQRIFVHPGIKKKLCETTGRERAWLNKVRPYYGHH 223 Query: 208 AHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPKPGTTKPEKKTP---PP 260 H HVRL C S C +Q SGDGCG +L WF +PPKPG + K P Sbjct: 224 EHFHVRLFCQPGSPGCTEQRATGSGDGCG-DLDWWFDVALQPPKPGGKPAKPKPPMMLAD 282 Query: 261 LPPSCQALLDEHVI 274 +P +C+ + + + Sbjct: 283 MPNACRQVANAPAL 296 >UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDN2_9RHOB Length = 297 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 123/267 (46%), Gaps = 20/267 (7%) Query: 24 QKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSS 83 ++ P S + GS+S GC+ G + + +QVMR + R +GHPD++ ++ LS Sbjct: 31 GALSLPSKQSPNAFGSYSKGCLAGGEEMLESGPTWQVMRLSRDRNWGHPDMITLLKNLSK 90 Query: 84 QVSNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALD 142 V+ + IGD+ P GG GHASHQ GLD DI++ LP Q R Sbjct: 91 SVAKKTSWNGIYIGDISQPRGGPMISGHASHQLGLDADIWM-LPAKNLNLTQARRESISS 149 Query: 143 L-VSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVR 201 + + K ++ W E ++K+ A+D V RIFV K +C ++DWL+K+R Sbjct: 150 INIRSKNKKTTNSNWTNEHVDVLKIFAKDPSVDRIFVTAPAKIYMCKHEVGNKDWLQKIR 209 Query: 202 PWFQHRAHMHVRLRCPADSLECEDQPLPP-----SGDGCGAELQSWFEPPKPG------- 249 P++ H H HVR++CP DS C+ Q G GC L W Sbjct: 210 PYWGHNFHFHVRIKCPKDSKLCKTQKPSVQYLSKGGTGCDETLNWWITKALEPVKIDPKK 269 Query: 250 -----TTKPEKKTPPPLPPSCQALLDE 271 P + LPP C ++L+ Sbjct: 270 DKPKQKKHPTEYMMNELPPQCMSVLNN 296 >UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS family M74 n=24 Tax=Alphaproteobacteria RepID=Q3SVT3_NITWN Length = 350 Score = 302 bits (774), Expect = 7e-81, Method: Composition-based stats. Identities = 101/267 (37%), Positives = 142/267 (53%), Gaps = 10/267 (3%) Query: 16 ASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 A A + + T P G+ IG ++ GCI GA+ LP+ +QVMR + R + HP +V Sbjct: 80 ALAAKQLFGRKTLPAAGAPYVIGFYARGCIAGAEALPVTGPTWQVMRLSRNRNWAHPAMV 139 Query: 76 MFIQRLSSQVSN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSA 133 ++R+S++ G +LIGDM P GG GHASHQ GLD D++L +P + Sbjct: 140 ALLERVSAKARRDAGWPGLLIGDMAQPRGGPMLTGHASHQIGLDADVWLTPMPNRLLSRN 199 Query: 134 QLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTD 193 + A+ +V RD + W P +I+ AA++ V RIFVN AIK+ LC +A D Sbjct: 200 EREEMSAVMMVRRDRLDIDPRAWTPSHLGVIRAAAREPSVERIFVNAAIKKALCREAKGD 259 Query: 194 RDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGA-ELQSWFE-------P 245 R WL KVRP + H H H+R++CP S +CE QP P +GCGA +L WF P Sbjct: 260 RSWLSKVRPMYGHDYHFHIRIKCPPGSPQCESQPPPGPAEGCGAQDLAYWFSDAVLHPKP 319 Query: 246 PKPGTTKPEKKTPPPLPPSCQALLDEH 272 PK T LP +C+ +L Sbjct: 320 PKTPPKPKPPITLSQLPTACRQVLAAP 346 >UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LL99_HALO1 Length = 299 Score = 295 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 153/260 (58%), Gaps = 13/260 (5%) Query: 21 TPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQR 80 +PW KI QP G A++IG + GC+ GA+ LP+ + V+R + R+FGHP L+ +++ Sbjct: 43 SPWGKIRQPAEGPARAIGGYGAGCVQGAEELPVSGPGFHVVRPRRHRHFGHPVLIAYLRD 102 Query: 81 LSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP---KTRWTSAQLLR 137 L+S+V G +L+GD+G P GG GH+SHQTGLDVD++ + P + R + R Sbjct: 103 LASRVRAAGGRDLLLGDLGQPRGGPAPSGHSSHQTGLDVDVWYRDPGHDEQRPLRRRERR 162 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWL 197 V DG +S P + ++ LAA D+ V RIFVNP IK+ LC AG +RDWL Sbjct: 163 ALRDRSVVVDG--ALSAEMAPRVMRVLSLAADDERVARIFVNPVIKRDLCAQAGEERDWL 220 Query: 198 RKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK-- 255 RK+RPW+ H AH HVRL CP DS EC+ Q P+GDGC E+ W + + K E+ Sbjct: 221 RKLRPWWGHDAHFHVRLECPDDSPECKAQAALPAGDGCD-EVSWWLDEERQAERKEERGR 279 Query: 256 -----KTPPPLPPSCQALLD 270 + P LP +C LLD Sbjct: 280 YRKNVRGLPELPAACAPLLD 299 >UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8M3_9GAMM Length = 317 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 127/243 (52%), Gaps = 10/243 (4%) Query: 6 IALLALLASSASLAATP-----WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + L +L ++A+L+ P W PV + Q++GS +NGC +GA L + + + Sbjct: 40 LTLFLVLCATAALSKDPDKVNVWSMQRAPVGATPQAVGSAANGCQLGAQMLEAEGDGFIS 99 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + R++ P + ++R+ +V+ + +LIGD+ P GG GH+SHQ GLDVD Sbjct: 100 IRRWRNRFYSQPITLKLVRRVGQEVATMHGAKILIGDLSQPVGGEMPFGHSSHQNGLDVD 159 Query: 121 IFLQ-LPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 I+ +P ++ P +V +V LW+ + AA + RIFVN Sbjct: 160 IWFYAVPAGSQPDKEVEPP---SMVDGAAGTLVPGLWQAAYRDALYAAATFPETNRIFVN 216 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 P IK LC D +D WL K+RPW H +H HVRL CP S EC Q P GDGC A+L Sbjct: 217 PVIKAHLC-DTESDTRWLHKIRPWIGHDSHFHVRLNCPPGSPECVTQAAIPPGDGCDADL 275 Query: 240 QSW 242 W Sbjct: 276 YKW 278 >UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BS55_GRABC Length = 276 Score = 286 bits (731), Expect = 8e-76, Method: Composition-based stats. Identities = 92/244 (37%), Positives = 134/244 (54%), Gaps = 8/244 (3%) Query: 2 NKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVM 61 +K + ++ LL+ S + + P + QPV Q IG NGCI GA LP + +Q + Sbjct: 4 SKLLVGIVMLLSCSGMVLSAP--VLAQPV----QIIGPAGNGCIAGAQRLPDEGPGWQTI 57 Query: 62 RTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI 121 R D+ ++ P + ++ L++++ G+ + +GDM P GGR GGH SHQ GLDVD+ Sbjct: 58 RRDRSSFWSAPVTINGVKTLATRLHAQGLPDLYVGDMSAPHGGRLPGGHGSHQNGLDVDL 117 Query: 122 FLQLPKTR-WTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 +L L T + + +VS DG + W + +L+ +AA +V R+ VNP Sbjct: 118 YLDLTPRPALTPDERNVLEPPSMVSADGNSLSPA-WTQDTVTLLHMAATLPNVDRVLVNP 176 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 IK+ LC DR WL +RPW+ H+AHMHVR RCPA C P PP+GDGC L Sbjct: 177 VIKRALCEQVSGDRSWLHLIRPWWGHKAHMHVRFRCPAGQTLCVQAPPPPTGDGCDTTLA 236 Query: 241 SWFE 244 WF+ Sbjct: 237 WWFQ 240 >UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16D60_ROSDO Length = 309 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 99/262 (37%), Positives = 132/262 (50%), Gaps = 13/262 (4%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 A + + GS++ GC+ GA LP +Q MR + R + HP+ V F+ Sbjct: 47 AKQLFGAKSAASQSPPAPFGSYAKGCVAGAAQLPETGPTWQAMRLSRNRNWAHPETVSFV 106 Query: 79 QRLSS-QVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT-RWTSAQLL 136 + LS G + +GD+ P GG GHASHQ GLD DI+L+ + A+ Sbjct: 107 KDLSRIAAQQPGWNGLYVGDLSQPRGGPMLSGHASHQIGLDADIWLRPATNLSLSVAERE 166 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 ++ L R+ V+ W P+ +++K AA D V RIF+ P K QLC A DR W Sbjct: 167 NISSISL-RRNAGAFVNDNWTPQHAAILKAAASDPRVARIFIFPGAKVQLCNTATGDRSW 225 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF-----EPPKPGTT 251 LRK+RPWF H H HVRL CP+ S C DQ PP+GDGC A+ Q+W PP Sbjct: 226 LRKIRPWFGHHYHFHVRLSCPSGSTGCVDQTPPPAGDGC-ADAQAWVNNILNPPPPDPNA 284 Query: 252 KPEKKTPP----PLPPSCQALL 269 KP K PP LP C +L Sbjct: 285 KPRKPRPPVRLADLPAQCADVL 306 >UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NYY0_HAEIN Length = 185 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL +V G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRVKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIF 177 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIF Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIF 184 >UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WGM9_9RHIZ Length = 316 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 19 AATPWQKITQPV-PGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMF 77 A + PV QSIG ++ GC+ GA LP ++QVMR + R +GHP ++ Sbjct: 101 AKQAFGAQALPVLAQDPQSIGFYAKGCLAGAVALPTDGPNWQVMRLSRNRRWGHPRMIGL 160 Query: 78 IQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQLL 136 +++LS + G +L+GD+ P GG GHASHQ GLD DI+L +PK R+T A+ Sbjct: 161 LEKLSRDAAKDGWPGLLVGDISQPRGGPMLTGHASHQVGLDADIWLTPMPKKRFTDAERE 220 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 A+ ++ D +V W P +LIK AA +R + + Q+ L G R Sbjct: 221 SVSAVSMLKPDSLYVDPKKWTPARTALIKHAASYPG-SRAHLRASRHQEGALRHGEGRQE 279 Query: 197 L 197 L Sbjct: 280 L 280 >UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MP34_BDEBA Length = 518 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 28/234 (11%) Query: 21 TPWQKITQPVPGS-AQSIGSFSNGCIVGA-DTLPIQSEH----YQVMRTDQRRYFGHPDL 74 P T P +Q+IG + G + A + L + H Y+++R ++ +F +L Sbjct: 293 QPRVPETAPAVNKVSQAIGPVNAGRLQNAANMLTYEQAHAPTGYEIIRPKRKTHFATNEL 352 Query: 75 VMFIQRLSSQVSNLGMG-TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSA 133 I ++ G + +GD+ AGG+ G H SHQ GLD D+ S Sbjct: 353 AYIIVKMGLLTKKEIPGYELAVGDLSREAGGKL-GSHKSHQNGLDADVAFFFNNK---SF 408 Query: 134 QLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTD 193 Q A+ + ++ W L K + + RIF++ A+KQ LC A + Sbjct: 409 QGYFASAVAVNKPHANWMLEPQW-----KLFKEVVGTQLIDRIFIHGALKQALCSHAIAN 463 Query: 194 RDW------------LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGC 235 + LR++ P H H H+R++C + C P + GC Sbjct: 464 GELTKGDNSSLAAQTLRRLIPEKDHHNHFHLRVKCSKAQVRCRQMAEPVNTTGC 517 >UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0F0_9DELT Length = 339 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 30/211 (14%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVS--NLGM 90 + QS G ++G + LP S HY +R R + LV + + G+ Sbjct: 140 TGQSRGRPTHGWLHDPSRLP-HSSHY--LRRRPERTYASAHLVDHTLNAIDRARDQHPGL 196 Query: 91 GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKH 150 + IGD+ GG GH SHQ+G D+DI + P+ ++D Sbjct: 197 HRLAIGDLSDEDGGPL-SGHHSHQSGRDIDIGFYYRQRP-----ANYPKEFARATKDNLD 250 Query: 151 VVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQ----- 205 +T W + +L++ + +D V +IF++ ++ L A D +++R FQ Sbjct: 251 ADAT-W-ALVEALVRTSGKDGGVEKIFLDYEVQGWLYAAARKDGWSKKRLREVFQYPDGR 308 Query: 206 ------------HRAHMHVRLRCPADSLECE 224 H H+HVR RC C+ Sbjct: 309 YAKHGMIRHEPKHDDHLHVRFRCVDADESCK 339 >UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH2_HALO1 Length = 377 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 81/215 (37%), Gaps = 32/215 (14%) Query: 28 QPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN 87 +PV G QS+GS G +V LP +Y R R +G + I+R + V N Sbjct: 175 RPVAG--QSVGSVVRGRLVNGMQLPEGRGYY---RRRPHRAWGASHTIHHIRRAIASVRN 229 Query: 88 LGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVS 145 V IGD+ GG+ H SHQ+G DVDI L K R + Sbjct: 230 RLPKVHEVAIGDISTHDGGQL-ADHRSHQSGRDVDIGLYYKKRP-------RGYPKSFIR 281 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK------ 199 D +++ I +L + V +F++ ++ L A RK Sbjct: 282 GDQQNLDLQATWALIEALANTSKVAGGVDIMFLDYDLQGHLYKWAKKHGVSKRKLGEILQ 341 Query: 200 -----------VRPWFQHRAHMHVRLRCPADSLEC 223 VR H H+HVR +CP +C Sbjct: 342 YPRGESSASGLVRHEPGHATHVHVRFKCPKSDEKC 376 >UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3P5_9DELT Length = 467 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 28/233 (12%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ++ A +SA++AA P + G+ S G + G IV LP + Y + + ++ Sbjct: 248 SVAASAGTSAAVAARPALPLVNIRRGAISS-GKPNRGKIVNGLQLPENPKLYTIRKPEES 306 Query: 67 RYFGHP--DLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ 124 H +L + I G ++IG + GGR H+SHQ+G DVDI L Sbjct: 307 YGSTHTLHNLQLAIANFRQDTGYTG--AIVIGAISKKGGGRLRP-HSSHQSGRDVDIRLP 363 Query: 125 LPKT-RWTSAQLLRP----------QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKD- 172 + + T AQ +AL +ST + + K A KD Sbjct: 364 VKAGIKGTLAQDSSEVDWDATWGLIRALVATGEIQYIFLSTSRQKHLLKAAKRAGASKDM 423 Query: 173 VTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECED 225 + R+ +P AGT+ +R + H +H H+R C ++ CE Sbjct: 424 LERVIQHP-------RKAGTNHGIVRHAK---GHTSHFHIRFTCASNESHCES 466 >UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM08_SORC5 Length = 350 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 25/243 (10%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV-SNLGMG 91 S G+ + G + GA L S H + + R +G P LV ++R + QV G Sbjct: 113 KPLSKGAPNRGRLTGAVRL-RSSRHLKT--REGARTWGLPVLVKTLRRAAFQVAKKHGDS 169 Query: 92 TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHV 151 +L+GD+ AGG + GH SHQTG D D+ + ++ + + R A D Sbjct: 170 ALLVGDLSARAGGALD-GHNSHQTGRDADVGFYVVNSKGKNLRTDRFVAFDDEGNAIGLP 228 Query: 152 VSTLWKPEIFSLIKLAAQDKD--VTRIFVNPAIKQQLCLDAGTDR----------DWLRK 199 + ++L++ +D+ V +FV A++ +L A R + Sbjct: 229 GARFDDARNWALVQALLEDRQAGVKYLFVTDALRARLLAHAAKKRVPADLRARAAAAMMS 288 Query: 200 VRPWFQHRAHMHVRLRCPADSLE-CEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTP 258 R H H H+R+ CP C ++ L C A+ EP K + T Sbjct: 289 PRDADLHNDHFHIRVMCPPSMRGACIEESLARPA--CAAD-----EPKKALDSAAPAATE 341 Query: 259 PPL 261 P + Sbjct: 342 PDI 344 >UniRef50_A9FG49 Putative penicillin-insensitive murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG49_SORC5 Length = 410 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 38/214 (17%) Query: 27 TQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 P S+G+ + G + +P + + ++++ D +G + + + R ++V Sbjct: 108 KDPAALGPMSLGATNAGALFNGVRMP-EGDRWELV--DPAHAWGTRETIDALDRAIAEVH 164 Query: 87 NL--GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI-FLQLPKTRWTSAQLLRPQALDL 143 G + IG + GGR + H SHQ G DVDI + + RW Sbjct: 165 RQFPGSPKLYIGHISAREGGRLSP-HKSHQAGRDVDISYFLDARHRWY------------ 211 Query: 144 VSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDRDWL--- 197 + + L + ++ ++ + DV I ++ ++++ L A G D+DWL Sbjct: 212 ----QRATAANLDRERTWAFVRALVTETDVELILIDSSVQRLLKEHALKIGEDKDWLDEV 267 Query: 198 -----RKVRPWF----QHRAHMHVRLRCPADSLE 222 RK RP H H+HVR P Sbjct: 268 FQLGSRKPRPLIRHARGHANHIHVRFYSPVAQES 301 >UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHQ4_SORC5 Length = 303 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 104/277 (37%), Gaps = 45/277 (16%) Query: 6 IALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQ 65 + L L +A + ++P T P SIG +G I A LP Q Y+++R++ Sbjct: 12 LLGLVALCCAACVGSSP----TPLAPALRGSIGVPHHGVITDAVELPKQGPGYRLLRSNG 67 Query: 66 RRYFGHPDLVMFIQRLSSQV--SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 R +G LV +QR +++V + G +++GD+ GG GH SH+TG D D+ L Sbjct: 68 IR-WGTAGLVAAVQRAAAEVALARPGGAPLVVGDLSARYGGATR-GHRSHRTGRDADLLL 125 Query: 124 Q--LPKTRWTSAQLLRPQALDLVSRDGKHVVS------------TLWKPEIFSLIKLAAQ 169 P R + D + R + L+K + Sbjct: 126 YALTPDGRPVRSPGFVAIGPDGLGRISDGAEEPASPRAGAPQYVRFDVEREWLLVKSLIR 185 Query: 170 DKD--VTRIFVNPAIKQQL---CLDAGTDRD--W-----LRKVRPWFQHRAHMHVRLRCP 217 D V +F+ ++ L G D + W L + R H H+H+R+ C Sbjct: 186 SPDAHVQWLFLARWLEALLIEYARALGEDPELIWYAESVLLQPRDSTAHADHIHLRVACT 245 Query: 218 ADSLECEDQPLPPSGDGC-GAELQSWFEPPKPGTTKP 253 D GC G Q + P P P Sbjct: 246 PDETL----------SGCLGGGPQWPWLPAVPQLIPP 272 >UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G007_9DELT Length = 285 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 93/259 (35%), Gaps = 44/259 (16%) Query: 5 AIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD 64 + + A L A W T S+G + G I + + + V T Sbjct: 3 SALVFAALLLGACATPGRWTDYTSV------SVGKSNEGRIHRPVKMRPRGRGFLVPSTW 56 Query: 65 QRRY--FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIF 122 + R +G +LV ++R + +V + T+ + D+ GG+ + HASHQ+G DVD+ Sbjct: 57 RERGNQWGTTELVGMVERAAGKVRDQKRATLGVADLSPKRGGK-SIWHASHQSGRDVDLI 115 Query: 123 LQLPKTRWTSAQLLRPQALDLVSRDG------------------KHVVSTLWKPEIFSLI 164 R + P +++V DG + LI Sbjct: 116 FYTVDERGKTQ---PPPEVEMVHFDGSGEPFIPRHMRTTGYEEPTWETRRFDDARNWLLI 172 Query: 165 KLAAQDK--DVTRIFVNPAIKQQLCLDAGTD----------RDWLRKVRPWFQHRAHMHV 212 + D+ V IFV+ A++ ++ A R+ +R+ H H HV Sbjct: 173 EALLSDRAVRVQWIFVSNALEARMLRWAERHDRPRWLIEYGREIMRQPGASAPHDDHFHV 232 Query: 213 RLRCPADSL--ECEDQPLP 229 R+ C CED Sbjct: 233 RVYCSRADRALGCEDTGPI 251 >UniRef50_D0LT36 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LT36_HALO1 Length = 316 Score = 113 bits (282), Expect = 7e-24, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 26/213 (12%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD--QRRYFGHPDLVMFIQRLSSQVSNLGM 90 + S G+ + G + + L Y++ + +G +LV I R ++ V Sbjct: 68 PSTSCGAANRGSLAESQALARAGIGYKIPEPWWLRGHNYGTAELVGLITRAATTVHLEHA 127 Query: 91 GTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGK 149 G VL + D+ GG GH SHQ+G DVD+ + A + G+ Sbjct: 128 GGVLGVADLSAADGGALP-GHRSHQSGRDVDLIYYALSPDGLPLEPDGHMAYYGRAGHGR 186 Query: 150 HVVSTLWK----------PEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDA------- 190 H + ++ + L++ +D +V IFV+ +++ L A Sbjct: 187 HARAPQFERDIPERYFDLARNWGLVRAMLEDPHAEVEHIFVSSRVRRWLLDYAQRAEEPE 246 Query: 191 ---GTDRDWLRKVRPWFQHRAHMHVRLRCPADS 220 LR+ + H HMHVR+ C A+ Sbjct: 247 ELIAQAAKVLRRPKGVDGHNDHMHVRILCSAED 279 >UniRef50_Q08Y50 LysM domain protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08Y50_STIAU Length = 505 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 32/215 (14%) Query: 28 QPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN 87 +P + S+G +G +V P + + V+ + + + + ++ ++ V Sbjct: 186 EPQSLGSVSVGFVESGRLVNGVRFPDGGQDWIVV--SPEKTYATEETITYLSQVIRAVRA 243 Query: 88 LGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVS 145 + + + GG H SHQ+G DVD+ P + + Sbjct: 244 ALPDAPPLRVNQISAKEGGYMRP-HKSHQSGRDVDLGFYYP----------TAEPIRARD 292 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDRDWLRK--- 199 R+ ++ W +L+K DV I V+ +++ L A G D+ WL Sbjct: 293 RENHIHLARNW-----ALVKALLAHADVQLILVDRRVQKVLYEYALKSGEDKAWLDSLFH 347 Query: 200 ------VRPWFQHRAHMHVRLRCPADSLECEDQPL 228 +R HR H HVR P Sbjct: 348 AGFQSLIRHARGHRDHFHVRFFSPRAQELGRRLAP 382 >UniRef50_A6GFS7 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFS7_9DELT Length = 482 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 69/200 (34%), Gaps = 37/200 (18%) Query: 37 IGSFS--NGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL--GMGT 92 G++ +G + +P ++Y + R +G D V IQ + Sbjct: 298 FGAYDDDSGVLKSGVQMPP-GKYYVLKTPS--RAYGTGDTVRMIQSAINAYRRKWKSSPK 354 Query: 93 VLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV 152 + IGD+ GG H SHQ G DVDI L + + VS + ++ Sbjct: 355 IHIGDLSRKGGGPLKP-HKSHQHGKDVDIGYVLK--------GDKKDEIRFVSANANNLD 405 Query: 153 STLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWL--------------- 197 ++LIK +V IF++ I++ L A + Sbjct: 406 ----VARTWTLIKAFLDTDEVKYIFMDHTIQKLLYDHAKSKGVSKDTLDEFFQYPRGKGR 461 Query: 198 --RKVRPWFQHRAHMHVRLR 215 +R H H HVR R Sbjct: 462 GHGIIRHSKGHVNHFHVRFR 481 >UniRef50_A0LM11 Peptidoglycan-binding LysM n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM11_SYNFM Length = 647 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 30/205 (14%) Query: 27 TQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 Q S G NG +V P Q YQ+ ++ R + P++V + V Sbjct: 28 VQQTEAVTASYGQPYNGRLVNGIPFPTQFPGYQL--REEERTYTTPEIVGAMLDAVEGVR 85 Query: 87 NLGMG--TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLV 144 + IGD GG + H SHQ G DVD+ + R Q + + Sbjct: 86 TRFPETCDLYIGDFSYKYGGG-SMNHRSHQNGRDVDVGMYAKGNRKLD------QFVSMN 138 Query: 145 SRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDRDWLRKV- 200 L P+ + L++ + + V IF++ +++ L A G D +L V Sbjct: 139 E-------ENLDVPKTWCLVEGIIRSQRVQYIFLDRRVQRLLYDYAVSQGADAAYLDHVF 191 Query: 201 --------RPWFQHRAHMHVRLRCP 217 + H H+HVR P Sbjct: 192 GNVRGSLIQHVGNHHDHIHVRFFTP 216 >UniRef50_A9G844 Putative exported endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G844_SORC5 Length = 439 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 17/216 (7%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQ--RRYFGHPDLVM 76 ++ P ++ P A S+G + G + G L + +V+ +G P LV Sbjct: 82 SSGPAREKAAP-QAPASSVGHPNEGRLEGGVRLDTSRKDIRVVPAYAGADVRWGLPALVG 140 Query: 77 FIQRLSSQVSNLGMGTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL 135 I+R + V+ G VL +GD+ GG H SH++G DVD+ R Sbjct: 141 MIERSARGVAKRFPGAVLDVGDLSRQRGGEV-HRHNSHESGRDVDLGFYALDARGKQVHA 199 Query: 136 LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDAGTD 193 D + P + L++ D V+ IF++ ++ L A Sbjct: 200 PIFLRFDARLASTNVPGARFDLPRNWLLVQHLLTDPRARVSHIFISDPLRSALIAHAKRI 259 Query: 194 RDW----------LRKVRPWFQHRAHMHVRLRCPAD 219 + + H HMHVR+ CPA Sbjct: 260 GVSRALIVRAQLAMMQPTGAESHDDHMHVRISCPAA 295 >UniRef50_A6G2U1 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2U1_9DELT Length = 408 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 86/233 (36%), Gaps = 42/233 (18%) Query: 12 LASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGH 71 L ++ + P VP A IG+ G +V A LP Y+ R +G Sbjct: 195 LVYASIVDDVPQNARAALVPPGAHGIGTPQAGVLVAAVQLPP-GPGYE--RRYPNSAWGT 251 Query: 72 P----DLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPK 127 V + +++ + +G M GG+ GGH SHQ+G D+DI L L Sbjct: 252 TWAVRHTVAALDHFAARSDYP--NPIRVGTMSRQRGGKI-GGHISHQSGRDLDIRLPL-- 306 Query: 128 TRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLC 187 RP+ + + V W P LI+ A V+ IF++ +++L Sbjct: 307 ---------RPEVPQSLPPTLRRVD---W-PATLELIQAFADTGFVSVIFLDYKAQRRLY 353 Query: 188 L---DAGTDRD--------------WLRKVRPWFQHRAHMHVRLRCPADSLEC 223 +AG D L VR H H+HVR C EC Sbjct: 354 KAGQEAGLDDATLGELMQYPRGSAASLGLVRHSPGHADHIHVRFPCGPAEPEC 406 >UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7X3_9DELT Length = 610 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 80/227 (35%), Gaps = 36/227 (15%) Query: 30 VPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN-- 87 V A S+GS +NG I A P + Y+ R + + +Q + Sbjct: 397 VREDAVSVGSPNNGSIENAIQFPRNDDLYK--RRYPNIMWCGGHMAKHLQWAIASFRYNY 454 Query: 88 LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRD 147 G +++ DM GG F H SHQ+G DVDI+L K + QL RD Sbjct: 455 EFEGEIVVADMSKKKGGHFPP-HKSHQSGRDVDIWLPTLKGVYKKNQLN--------DRD 505 Query: 148 GKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG---------------- 191 + ++ ++ + +V +F+ + ++ A Sbjct: 506 YRPQSEEADWFALYGFLQALHETGEVHAVFLAYELHDRVYQAAKIMGATDEELDAMIAYP 565 Query: 192 ---TDRDWLRKVRPWFQHRAHMHVRLRCPADSL--ECEDQPLPPSGD 233 R L + P H H+HVR +C C ++ GD Sbjct: 566 RGEHHRKSLLQHSP--GHTHHVHVRFKCSRADKEAGCSNRLAHGPGD 610 >UniRef50_A6FXN2 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXN2_9DELT Length = 443 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 35/214 (16%) Query: 32 GSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMG 91 ++S+G +G + GA + I + ++ + +G V + + + + Sbjct: 242 QRSESVGFPGSGTLSGAMPM-IDGPG-RELKHTPWKGWGTTITVATLDVILREWARRFPD 299 Query: 92 --TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGK 149 +L+G+M GGR H+SHQ+G DVD+ W + L + +D + D Sbjct: 300 RQPILVGNMSSREGGRLKP-HSSHQSGRDVDLSY---PQIWDRKEELNWRKMDSRNLD-- 353 Query: 150 HVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRD--------WLRKVR 201 + +SL+++ + V IF++ +++ L A W+ Sbjct: 354 -------RELTWSLLEILLESGAVEVIFIDSKLQKLLYEYAVQTGRYKKTELKNWMEYPS 406 Query: 202 P----------WFQHRAHMHVRLRCPADSLECED 225 P H H+HVR +C + C+ Sbjct: 407 PPGTGDPLIQHVRGHDDHIHVRFKCTSSEGRCQS 440 >UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella benthica KT99 RepID=A9DE24_9GAMM Length = 94 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 11/91 (12%) Query: 187 CLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSW---- 242 CLD + WL KVRPW+ H+ HMHVRL C C++Q LP SG GC +L W Sbjct: 6 CLDCLYN--WLSKVRPWWGHKIHMHVRLSCAEGDKLCQNQNLPVSGTGC-EDLSWWKQQI 62 Query: 243 FEPPKP-GTTKPEKKTPPPL---PPSCQALL 269 +P K T+K +K+ P P+ P CQ LL Sbjct: 63 LQPKKSAQTSKDKKREPKPVKVKPELCQLLL 93 >UniRef50_A6GFI1 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFI1_9DELT Length = 414 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 35/196 (17%) Query: 39 SFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQR--LSSQVSNLGMGTVLIG 96 G ++ LP + +Y +G P + I + + + G + IG Sbjct: 234 PPQPGRLLHGRKLPERDSYYI---KRPHNVWGTPRTIRLITQVVAAYERRANGGPQLRIG 290 Query: 97 DMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLW 156 D+ GG GH SHQ G+D+D+ + L + A + Sbjct: 291 DISKQHGGPM-QGHLSHQEGVDIDVGVVL---KGKLADRKHFS---------GATEKNID 337 Query: 157 KPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK----------------- 199 + LI+ +V IF++ ++QL A + +K Sbjct: 338 LQRTWILIEEFLATGEVRYIFLDYKFQKQLYEYAKSQGVSEQKLDEYFQYPRGIGRNHGI 397 Query: 200 VRPWFQHRAHMHVRLR 215 +R W H H+HVR + Sbjct: 398 IRHWRGHVNHLHVRFK 413 >UniRef50_D0LSR2 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR2_HALO1 Length = 329 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 81/226 (35%), Gaps = 33/226 (14%) Query: 32 GSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRR--YFGHPDLVMFIQRLSSQVSNLG 89 G++ S G + G ++ LP + E + V R +G +LV + +++ L Sbjct: 56 GTSISYGPSNGGKLIRPALLPERGEGFVVPERWATRGLRYGTDELVSLVVYAGREMARLS 115 Query: 90 MG-TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALD------ 142 G + + D+ + GG + H SHQTG DVD+ + ++ + + D Sbjct: 116 PGAELAVADLSLLRGGP-SAWHHSHQTGRDVDLLFFVRESDGSPRVMRNMAGFDDDGVAR 174 Query: 143 ---------LVSRDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDAG 191 D + L++ ++ V +F++ +KQ L A Sbjct: 175 VPSGRWDDGRTPEDESIRELRFDAERNWLLVRTLVENPIAPVQFLFISDPLKQLLIDHAR 234 Query: 192 TDRD----------WLRKVRPWFQHRAHMHVRLRCPADS--LECED 225 + L + H H+HVR+ C C D Sbjct: 235 ALGEPEALIQRASYLLHQPGDSLPHNDHIHVRIYCAPSDRVHGCRD 280 >UniRef50_Q1D9Z6 LysM domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D9Z6_MYXXD Length = 598 Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 33/200 (16%) Query: 36 SIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGM--GTV 93 ++G +G +V A P Q + + V+ + + V ++ V + Sbjct: 155 AVGFAHSGRLVNARQFP-QGDDWIVVTPAGA--WATEETVNYLADAIRDVRARFPNAPPL 211 Query: 94 LIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVS 153 + M GG H SHQ G DVD+ P + +R+ V Sbjct: 212 RVNGMSHKEGGHMRP-HKSHQNGRDVDVGFYYP----------TVDPIRTRAREHVIDVR 260 Query: 154 TLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD---AGTDRDWLRK---------VR 201 W I+ DV I V+ +++ + AG D+ WL VR Sbjct: 261 MNW-----EFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKAWLDSIFNDGPMGIVR 315 Query: 202 PWFQHRAHMHVRLRCPADSL 221 HR H H+R P Sbjct: 316 HARGHRDHFHIRFHNPRAQE 335 >UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZJ3_9DELT Length = 435 Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 79/226 (34%), Gaps = 42/226 (18%) Query: 23 WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY---FGHPDLVMFIQ 79 W P A S G + G IVG L R ++ + + +V Sbjct: 207 WMAAVSP---GALSHGHPNKGKIVGEPCLLPDHPALYTRRFERIAHGSSYAVGVIVTAFA 263 Query: 80 RLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQ 139 G V++G + P G RF H SHQTG DVDI +LP W + + + Sbjct: 264 NFRRDTGYQG--EVIVGSVSRPHGRRFPP-HRSHQTGRDVDI--RLPLLPWFTPHVEPAE 318 Query: 140 ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRD---- 195 W+ + LI V IF++ +++ L A + Sbjct: 319 E------------EVDWRAL-WGLIDAFLATGQVEMIFLDHYMQRPLYYAALSMGATPEE 365 Query: 196 ------WLRK--------VRPWFQHRAHMHVRLRCPADSLECEDQP 227 W R+ +R H H+HVR+RC + +C + Sbjct: 366 LDEIITWPRRDGGKGKKIIRHSKGHEGHIHVRIRCGPEEPDCRTRK 411 >UniRef50_A0YMI6 Carboxypeptidase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YMI6_9CYAN Length = 536 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 30/170 (17%) Query: 49 DTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN-LGMGTVLIGDMGMPAGGRFN 107 +P E Y+ + + +GH +++ I + S+ + + IG++ + GG Sbjct: 44 QQMPASGEGYECY-GYRDKCYGHSEVIQAIISICSEWAKLYKKPRIGIGNISLTNGGPME 102 Query: 108 GGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLA 167 H+SHQ GLDVDI + + P L D K+ S ++ LI Sbjct: 103 P-HSSHQHGLDVDI------APIANTEEEIP----LTWYDSKY--SRDRTQQLVDLIHNN 149 Query: 168 AQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCP 217 +F +P IK V PW H H+HV P Sbjct: 150 TILGVKVILFNDPDIKG---------------VEPWAGHDNHLHVSFLPP 184 >UniRef50_A9AWE1 Peptidoglycan-binding domain 1 protein n=2 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE1_HERA2 Length = 306 Score = 77.4 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 22/152 (14%) Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 + +G V I+ +S + G G V +GD+ GG GHASH+TGLDVD++ Sbjct: 177 NGNANWGVASTVAQIEAAASDFAGYGKGKVPLGDISFEHGGDIP-GHASHETGLDVDLWP 235 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 ++ + + Q+ +++V I+ AA ++ F +P + Sbjct: 236 IRTDSKQCTGSRITWQSSTYDRAATRNLV---------KAIRAAAPNQITVIYFNDPVLI 286 Query: 184 QQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLR 215 + + + H H+H+R + Sbjct: 287 SEGLTTSYPN------------HDNHLHIRFK 306 >UniRef50_C4DNK9 Putative peptidoglycan-binding domain-containing protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNK9_9ACTO Length = 323 Score = 67.0 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 23/151 (15%) Query: 69 FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKT 128 +G V ++ + + G G + +GD+G GG GH SH+ GLDVD++ + Sbjct: 191 WGTASAVGQLEAGAKTFAESGNGPLPVGDIGFEHGGDIP-GHGSHEVGLDVDVWPIRGDS 249 Query: 129 RWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCL 188 + A + ++ + + +V I+ AA V +F +P + + Sbjct: 250 KQCEADRITWESAEYDRDATRQLVKD---------IRAAASGHVVFILFNDPKLIAEGLT 300 Query: 189 DAGTDRDWLRKVRPWFQHRAHMHVRLRCPAD 219 + H H+H+R C Sbjct: 301 SEYAN------------HDNHLHIR-YCEVG 318 >UniRef50_Q1N8Y8 TraG n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Y8_9SPHN Length = 1091 Score = 67.0 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 25/194 (12%) Query: 21 TPWQKITQPVPGSAQSIGSFSNGCIVGADT--LPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 P + P + G + G LP E ++ ++ F ++ + Sbjct: 919 APTRPEALPHGVADAPHGVPGAP-LSGPVDVVLPRSGEGFRSY-SNAAHQFATAGMIGEL 976 Query: 79 QRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRP 138 + S G V IGD+ GG GH +H+TG +VDI + P Sbjct: 977 EASSRAWVARGGAPVNIGDISRAGGGDMP-GHETHETGRNVDI------RPFRRDGQNEP 1029 Query: 139 QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLR 198 D W + ++ +F +P + ++ G + Sbjct: 1030 VNWRSPDYDRNAT--REWIQMMRE------RNPQARVLFNDPELIREGLAQRGDRPGAPQ 1081 Query: 199 KVRPWFQHRAHMHV 212 H H+H+ Sbjct: 1082 H------HDNHLHL 1089 >UniRef50_Q21G72 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q21G72_SACD2 Length = 227 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 31 PGSAQSIGSFSNGCIVGADTLPIQSEH---YQVMRTDQRRYFGHPDLVMFIQRLSSQVSN 87 +Q G+ + G I + LP + + Y + R + H D+ I ++ Sbjct: 21 ANKSQCYGTTAQGRIEHSVKLPAKGTNFVSYSELAGALGRTYVHADVAKIILAAYDSLAL 80 Query: 88 LGMGTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWT---------SAQLLR 137 + G+ GG+F H +HQ GL VD + + R + Sbjct: 81 SHPNKAYKYAETGLKHGGKFKP-HKTHQNGLSVDFMVPVTNPRGESVHLPTHAFNRLGYD 139 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDK-DVTRIFVNPAIKQQLCLDAGTDRDW 196 + + + + +L K A Q +TR+ +P ++ +L Sbjct: 140 IEFDNNSQYKNLSIDYPAMAAHLVALDKAAKQRGFKLTRVIFDPQLQPELFKTPLG-AYL 198 Query: 197 LRKV-----RPWFQHRAHMHVRLRCPADSLECED 225 + + R W +H H HV P C+ Sbjct: 199 KQHIVFSTKRAWVRHDEHYHVDFAIP-----CKP 227 >UniRef50_C7R9R6 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9R6_KANKD Length = 229 Score = 63.1 bits (152), Expect = 8e-09, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 19/198 (9%) Query: 38 GSFSNGCIVGADTLPIQSE---HYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVL 94 G+ S G + G LP Y + R + H ++ + + V Sbjct: 30 GTTSAGRLEGGVQLPKSGSNFVGYSDIAHLVGRTYVHSEVKDIVIDAYKYLELERPAKVY 89 Query: 95 -IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPK--------TRWTSAQLLRPQALDLVS 145 + G GG F H +H+ GL VD + + + D Sbjct: 90 KYAETGWEKGGEFKP-HKTHRNGLSVDFMTPVINAEGESVHLHTNPANRFGYDIEFDKNG 148 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDKD--VTRIFVNPAIKQQLCLDAGTD----RDWLRK 199 + + + AA+ + + R+ +P ++ L D L Sbjct: 149 KYNNLKIDYEALAAHIVALDEAAKARGHKLWRVIFDPELQAGLFETQFGDYIKKNIKLSN 208 Query: 200 VRPWFQHRAHMHVRLRCP 217 R W +H H HV P Sbjct: 209 RRSWVRHDEHYHVDFEIP 226 >UniRef50_UPI0001B561AE peptidoglycan binding domain-containing protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B561AE Length = 331 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 27/160 (16%) Query: 68 YFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPK 127 +G V ++ ++ G G + +GD+G+ GG GHASH+ GLD D++ Sbjct: 195 NWGTAAAVAQLEAAGRAFASAGRGRIPVGDLGLELGGNIP-GHASHEQGLDADLWPVRDD 253 Query: 128 TRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLC 187 +A + ++ + +V I+ AA V +F N QL Sbjct: 254 GAQCTAARITWKSAAYDRAATRRLVQE---------IRRAAP-GHVKTVFFNDP---QLI 300 Query: 188 LDAGTDRDWLRKVRPWFQHRAHMHVRLRC----PADSLEC 223 + T W H H+HVR C P+ + C Sbjct: 301 SEGLTTS--------WAGHDNHLHVR-YCEPAHPSAAYRC 331 >UniRef50_A4EZ49 Putative uncharacterized protein n=3 Tax=Roseobacter RepID=A4EZ49_9RHOB Length = 251 Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 60/175 (34%), Gaps = 32/175 (18%) Query: 66 RRYFGHPDLVMFIQRLSSQV--SNLGMGTVLIGDMGMP--AGGRFNGGHASHQTGLDVDI 121 R + DL +Q +SQV G T+L+ D P G H SH+ G D+ Sbjct: 80 NRNYVSADLAEVLQEAASQVEAQYPGTQTLLL-DANFPFLDGFPLLP-HLSHKDGRKADL 137 Query: 122 FLQLPKTRWTSAQLLRPQALDLVS-RDGKHVVSTLWKPEIFSL----------------- 163 P + + DG W + L Sbjct: 138 AFYYQDQNGGYLPGHLPSPIGYFAFEDGPTECPDAWPTLRWDLAFLQPYWRDYSLEPERL 197 Query: 164 ---IKLAAQDKDVTRIFVNPAIKQQL-CLDAGTDRDWLRKVRPWFQHRAHMHVRL 214 ++ A ++ V +IF+ P ++Q+L DA R R H H+H+++ Sbjct: 198 KLVVQTLAGNERVEKIFLEPHLQQRLGLRDAKLRFQGCRAAR----HDDHLHLQI 248 >UniRef50_A9GTP3 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GTP3_SORC5 Length = 182 Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 16/144 (11%) Query: 94 LIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL--------RPQALDLVS 145 ++G+ G GG F H +HQ GL VDIF+ L A++ D Sbjct: 40 VVGETGHRDGGPFWP-HRTHQNGLSVDIFVPLRDGAGRPAEVSTYPWNKLGYGLEFDAQG 98 Query: 146 RDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPA-IKQQLCLDAGTDRDWLRKVRP 202 R G+ + + S + A+ + + RI + P + L AG L P Sbjct: 99 RSGELTIDFDDLARLLSALDEKARPRKLRIQRIILAPEYVPLLLASPAGRKLGSLAGAIP 158 Query: 203 ----WFQHRAHMHVRLRCPADSLE 222 W++H H+H+ A Sbjct: 159 RGPVWWRHDEHVHIDFAFAAGRPR 182 >UniRef50_B2IYA7 Putative uncharacterized protein n=2 Tax=Cyanobacteria RepID=B2IYA7_NOSP7 Length = 521 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 57/204 (27%) Query: 37 IGSFSNGCIVGADTLPIQSEHYQVM---------------RTDQRRYFGHPDLVMFIQRL 81 +G ++ + A+ +++M T FG L I+++ Sbjct: 349 VGGITHRWLQAANA-----PRWELMPKSDPNNGLVNGELEDTQDNHDFGTHWLADVIKKI 403 Query: 82 SSQVSN------LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL 135 + I D+ +P GG H H+TG+ DI+L + Sbjct: 404 AQDYQKSYRNTHPLAAPFAINDVSLPHGGD-TPDHHGHETGMMCDIYLPQKNGNFGGI-- 460 Query: 136 LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPA--IKQQLCLDAGTD 193 S + +++K K V +F N IK+ LC+ Sbjct: 461 -------------VWSSSNYDRDAARAILKSITNQKLVRAVFFNDQQLIKEGLCVSLN-- 505 Query: 194 RDWLRKVRPWFQHRAHMHVRLRCP 217 H H+H + P Sbjct: 506 -----------GHDNHIHFEINPP 518 >UniRef50_A6GGI0 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGI0_9DELT Length = 423 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQL 125 + +G ++ + ++ + S G + IGD+ GG+ H +HQ G+D D++L Sbjct: 225 HKQWGKEAVIRDLVGVAHEYSARTGGLLGIGDISHVDGGKIE-DHWTHQKGVDADLYLLD 283 Query: 126 PKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKD 172 +T T + ++ +W + A+ Sbjct: 284 WETPSTEPEPEPASE----AQPAPDPRPIIWWHHYKRGVSTWARKPK 326 >UniRef50_A9DVV8 Putative transmembrane protein n=1 Tax=Kordia algicida OT-1 RepID=A9DVV8_9FLAO Length = 272 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 46/209 (22%) Query: 45 IVGADTLPIQSEHYQVMRTDQ---RRYFGHPDLVMFIQRLSSQVSNLGMGTV-LIGDMGM 100 + G LPI + + +R R++ DL + ++ + N GT+ D Sbjct: 71 LYGRKPLPITNTALKPLRAYTFLMNRHYVAEDLYDVLLAEATAMQNEFPGTITYYLDGCF 130 Query: 101 PAGGRFNG-GHASHQTGLDVDIFLQLPK-------------------TRWTSAQLLRPQA 140 P G +F H SH G +D+ T+ + P+ Sbjct: 131 PLGKKFPLLPHWSHNDGRKIDLAFYYTDATTKKYRNGSPSWLGYGVCESPTAKEENMPEF 190 Query: 141 LDLVSRDGKHVVST-----------LWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD 189 + K + I+ + +IF+ P +K ++ L Sbjct: 191 CAEKGYFQYSFLEKIVPQYKKGNYVFDKTRTKTFIQKLTASSKIKKIFIEPHLKARMHLR 250 Query: 190 AGTDRDWLRKVR----PWFQHRAHMHVRL 214 + K+R +H H+HV+L Sbjct: 251 SS-------KIRFHGCHAVRHDDHIHVQL 272 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95... 368 e-100 UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35... 346 6e-94 UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63... 335 7e-91 UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae ... 334 2e-90 UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18... 331 2e-89 UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus R... 323 3e-87 UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae ... 322 6e-87 UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endop... 320 5e-86 UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, puta... 316 4e-85 UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endop... 316 5e-85 UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endop... 315 1e-84 UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endop... 306 4e-82 UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endop... 306 5e-82 UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/A... 304 3e-81 UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 ... 300 3e-80 UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endop... 300 3e-80 UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum Re... 296 4e-79 UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endop... 295 8e-79 UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endop... 294 1e-78 UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 ... 294 2e-78 UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS ... 293 4e-78 UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, tru... 293 5e-78 UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endop... 293 5e-78 UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 ... 293 6e-78 UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hom... 278 1e-73 UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16... 276 4e-73 UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 ... 267 3e-70 UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopime... 263 7e-69 UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 ... 214 2e-54 UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 ... 189 1e-46 UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus ... 177 5e-43 UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 ... 172 2e-41 UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 T... 164 2e-39 UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacific... 164 4e-39 UniRef50_A0LM11 Peptidoglycan-binding LysM n=1 Tax=Syntrophobact... 163 7e-39 UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium ... 163 7e-39 UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendope... 160 6e-38 UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacific... 156 8e-37 UniRef50_Q08Y50 LysM domain protein n=1 Tax=Stigmatella aurantia... 156 8e-37 UniRef50_A9G844 Putative exported endopeptidase n=1 Tax=Sorangiu... 156 9e-37 UniRef50_D0LT36 Putative uncharacterized protein n=1 Tax=Haliang... 151 3e-35 UniRef50_A6GFS7 LysM domain protein n=1 Tax=Plesiocystis pacific... 150 4e-35 UniRef50_A6FXN2 LysM domain protein n=1 Tax=Plesiocystis pacific... 149 1e-34 UniRef50_A6G2U1 LysM domain protein n=1 Tax=Plesiocystis pacific... 149 1e-34 UniRef50_D0LSR2 Putative uncharacterized protein n=1 Tax=Haliang... 146 6e-34 UniRef50_A9FG49 Putative penicillin-insensitive murein endopepti... 144 3e-33 UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacific... 144 3e-33 UniRef50_C7R9R6 Putative uncharacterized protein n=1 Tax=Kangiel... 143 7e-33 UniRef50_A6GFI1 LysM domain protein n=1 Tax=Plesiocystis pacific... 142 1e-32 UniRef50_Q1D9Z6 LysM domain protein n=1 Tax=Myxococcus xanthus D... 141 2e-32 UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacific... 140 4e-32 UniRef50_Q21G72 Putative uncharacterized protein n=2 Tax=Alterom... 139 9e-32 UniRef50_Q1N8Y8 TraG n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Y8... 133 6e-30 UniRef50_A9AWE1 Peptidoglycan-binding domain 1 protein n=2 Tax=H... 128 2e-28 UniRef50_A0YMI6 Carboxypeptidase n=1 Tax=Lyngbya sp. PCC 8106 Re... 125 1e-27 UniRef50_C4DNK9 Putative peptidoglycan-binding domain-containing... 116 1e-24 UniRef50_B2IYA7 Putative uncharacterized protein n=2 Tax=Cyanoba... 105 2e-21 UniRef50_A4EZ49 Putative uncharacterized protein n=3 Tax=Roseoba... 103 5e-21 UniRef50_UPI0001B561AE peptidoglycan binding domain-containing p... 98 2e-19 UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 ... 95 2e-18 UniRef50_A9GTP3 Putative uncharacterized protein n=1 Tax=Sorangi... 91 4e-17 Sequences not found previously or not previously below threshold: UniRef50_A6EMA3 Putative transmembrane protein n=4 Tax=Bacteroid... 71 4e-11 UniRef50_A9DVV8 Putative transmembrane protein n=1 Tax=Kordia al... 71 5e-11 UniRef50_A1ZWN3 Putative uncharacterized protein n=1 Tax=Microsc... 68 4e-10 UniRef50_Q26FZ9 Putative uncharacterized protein n=1 Tax=Flavoba... 67 8e-10 UniRef50_Q1MF00 Putative transmembrane protein n=8 Tax=Rhizobium... 62 2e-08 UniRef50_A6GGI0 Putative uncharacterized protein n=1 Tax=Plesioc... 49 1e-04 >UniRef50_Q0TFB8 Penicillin-insensitive murein endopeptidase n=95 Tax=Enterobacteriaceae RepID=MEPA_ECOL5 Length = 274 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 271/274 (98%), Positives = 271/274 (98%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV Sbjct: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MRTDQRRYFGHPDLVMFIQRLS QVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD Sbjct: 61 MRTDQRRYFGHPDLVMFIQRLSRQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV TLWKPEIFSLIKLAAQDKDVTRIFVNP Sbjct: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVPTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPP GDGCGAELQ Sbjct: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI Sbjct: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 >UniRef50_P44566 Penicillin-insensitive murein endopeptidase n=35 Tax=Pasteurellaceae RepID=MEPA_HAEIN Length = 286 Score = 346 bits (887), Expect = 6e-94, Method: Composition-based stats. Identities = 133/273 (48%), Positives = 178/273 (65%), Gaps = 3/273 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL + G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRAKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIFVN Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIFVN 186 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 PAIK +LC AG DR WL K+RPW H +H HVRL CPAD+ CE+Q P+GDGCG EL Sbjct: 187 PAIKVKLCQTAGNDRGWLHKIRPWHGHNSHFHVRLTCPADASYCENQAPVPAGDGCGDEL 246 Query: 240 QSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEH 272 SWFEPPKPGT+ + K PP P CQ +L+ Sbjct: 247 YSWFEPPKPGTSVSKPKVTPPEPFLCQQILNSP 279 >UniRef50_Q1C665 Penicillin-insensitive murein endopeptidase n=63 Tax=Enterobacteriaceae RepID=MEPA_YERPA Length = 275 Score = 335 bits (860), Expect = 7e-91, Method: Composition-based stats. Identities = 190/272 (69%), Positives = 220/272 (80%), Gaps = 1/272 (0%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 M + ++AL+ +AATPWQKIT PV GS QSIG F+NGC++GA LP++S YQV Sbjct: 1 MKNWIVGMVALVTMVPVMAATPWQKITHPVAGSPQSIGGFANGCVIGAQPLPLESADYQV 60 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 MR+DQRRYFGHPDL+ FI RLS+Q +GTVLIGDM MPAGGRF+ GHASHQ+GLDVD Sbjct: 61 MRSDQRRYFGHPDLLNFIHRLSAQAHQQQLGTVLIGDMAMPAGGRFSSGHASHQSGLDVD 120 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 I+LQLPK RW+ QLL+PQ +DLV+ DGK V+ LW+P+I SLIKLAA+D DVTRIFVNP Sbjct: 121 IWLQLPKQRWSQQQLLKPQPIDLVAVDGKRVIPALWQPQIESLIKLAAKDNDVTRIFVNP 180 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIK+QLCLDAG DR WL KVRPWF HRAHMHVRLRCPA+SLEC DQ PP GDGCGAEL+ Sbjct: 181 AIKKQLCLDAGADRQWLHKVRPWFAHRAHMHVRLRCPANSLECVDQDTPPPGDGCGAELE 240 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEH 272 SWF+PP P + KP K PPPLPPSCQALLD H Sbjct: 241 SWFQPP-PPSAKPGKTLPPPLPPSCQALLDNH 271 >UniRef50_D0ICV4 Murein endopeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICV4_VIBHO Length = 280 Score = 334 bits (857), Expect = 2e-90, Method: Composition-based stats. Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 4/272 (1%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 I + + S A A PW+K+ P PG+ +SIGS++NGC+ G LP++ E YQV+R Sbjct: 9 LFICMFLIGFSMAVAQANPWEKVQAPYPGAEKSIGSYANGCLSGGVALPLKGEGYQVIRP 68 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 + RY+GHP ++ ++ +L+ + G+ ++I D+ MP GG F GH+SHQTGLD DI+L Sbjct: 69 SRNRYYGHPAMIAYLTKLARKTKGFGLDDLMIADIAMPRGGNFTQGHSSHQTGLDADIWL 128 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 T L P A+ +V + W E L ++AA + +V RIFV+P IK Sbjct: 129 SFAPESLTRDSLESPVAVSMVDLQNYALKRDNWMKEHAILFQVAASEPEVARIFVHPVIK 188 Query: 184 QQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 + LC A DR WLRKVRPW+ H HMH+RL+CP S+ C Q PP+GDGCGAEL SW Sbjct: 189 ETLCDMAWEDRRWLRKVRPWWGHHYHMHIRLQCPEGSVNCIAQNTPPAGDGCGAELISWR 248 Query: 244 E----PPKPGTTKPEKKTPPPLPPSCQALLDE 271 K +KK P C +L + Sbjct: 249 PTSADRQKTVAATAKKKRVKIKPGQCDVVLAQ 280 >UniRef50_B7VJP4 Penicillin-insensitive murein endopeptidase n=18 Tax=Vibrionales RepID=B7VJP4_VIBSL Length = 279 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 9/277 (3%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 LAL+ S ++AT W+K P S SIGS++NGC+ GA LPI + YQV+R Sbjct: 2 RLFCTLALIFCSFVVSATSWEKEKSPTRNSTSSIGSYANGCLDGAQALPINGQGYQVIRP 61 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 + RY+GH + + FI+RL S +L+GD+ +P GGRF+ GH+SHQTGLD+DI+L Sbjct: 62 QRERYYGHTESIQFIERLGLTTSKQLNTNLLVGDISLPRGGRFSSGHSSHQTGLDIDIWL 121 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 +L + + +L P+ L +V + + W + F +I+ AA+D+ V RIFV+P IK Sbjct: 122 RLTDKKLSENELAVPKPLSVVDLTNYKLRESNWTDDHFQVIRYAAKDEKVVRIFVHPVIK 181 Query: 184 QQLCLDAGTD---RDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 LC +D R WL K+RPW+ H +H HVRL+CP S C Q PP GDGCG EL Sbjct: 182 HTLCEQENSDANGRAWLGKIRPWWGHHSHFHVRLKCPKGSSNCIAQASPPKGDGCGDELA 241 Query: 241 SWFEPPKPG------TTKPEKKTPPPLPPSCQALLDE 271 SW P +KK +P C AL+ Sbjct: 242 SWAPKTIPVPPPKKVAKSKKKKRVNVMPSQCLALISN 278 >UniRef50_Q7MNJ8 Murein endopeptidase n=2 Tax=Vibrio vulnificus RepID=Q7MNJ8_VIBVY Length = 276 Score = 323 bits (829), Expect = 3e-87, Method: Composition-based stats. Identities = 114/256 (44%), Positives = 162/256 (63%), Gaps = 3/256 (1%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 +L T W+ +T P AQSIGS++NGC+ G LP++ YQV+RT++ RYF HP+ V Sbjct: 19 ALQMTAWELVTAPTRERAQSIGSYANGCLDGGVALPLEGAGYQVVRTERNRYFAHPETVN 78 Query: 77 FIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL 136 FIQ L T++I D+ +P GGRF+ GHASHQTGLD+D++L+L + +L Sbjct: 79 FIQELGYYADTHLASTLMIADVSLPRGGRFSFGHASHQTGLDIDVWLKLNTSPLNKYELE 138 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCL-DAGTDRD 195 + + +V+ D + + W+ E F LI+ AA++ V RIFV+ IKQ+LC + T R Sbjct: 139 QAKTESVVNFDTMTIRADEWRDEQFELIRAAAENGRVARIFVHAVIKQRLCQMETSTHRS 198 Query: 196 WLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK 255 WLRKVRPW+ H +HMHVRL CP S +C +Q LPP GDGCG E+ SW E P P K ++ Sbjct: 199 WLRKVRPWWGHSSHMHVRLSCPQGSDDCIEQALPPEGDGCGEEVLSWIERPTPTAKKAQE 258 Query: 256 KTPPPLPPSCQALLDE 271 P P+ +C +L++ Sbjct: 259 --PEPISEACVTVLNQ 272 >UniRef50_B8K7B3 Peptidoglycan amidase MepA n=6 Tax=Vibrionaceae RepID=B8K7B3_VIBPA Length = 285 Score = 322 bits (826), Expect = 6e-87, Method: Composition-based stats. Identities = 130/270 (48%), Positives = 178/270 (65%), Gaps = 7/270 (2%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ALL +L S + A+ PW+++TQP + QSIGS++NGC+ G +LP+ + YQV+R+ + Sbjct: 13 ALLLILVFSPAHAS-PWEQVTQPSSQAPQSIGSYANGCLAGGASLPLSGDGYQVIRSQRA 71 Query: 67 RYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP 126 RY+GHPD + FIQRL + +LIGDM +P GGRF+ GH+SHQTGLD+DI+L+L Sbjct: 72 RYYGHPDAIGFIQRLGALSQQQLSTHILIGDMSLPQGGRFSSGHSSHQTGLDIDIWLKLA 131 Query: 127 KTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL 186 + QL P+ L +V+ + ++ W P F L+KLAA D+ V RIFV+P IK++L Sbjct: 132 DEPLSQTQLAEPKPLSVVNIEQYQLLKNNWNPRHFELVKLAASDEQVARIFVHPVIKEKL 191 Query: 187 C-LDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP 245 C + +DR WLRKVRPW+ H HMHVRL+CP DS C+ Q PP GDGCGAEL SW Sbjct: 192 CASEQASDRAWLRKVRPWWGHHYHMHVRLKCPQDSRHCKPQAAPPQGDGCGAELASWKPQ 251 Query: 246 PKP-----GTTKPEKKTPPPLPPSCQALLD 270 PKP + K +KK+P +P C+ LL Sbjct: 252 PKPAAPKAASVKAKKKSPKVMPEQCRQLLA 281 >UniRef50_B0TS44 Peptidase U6 penicillin-insensitive murein endopeptidase n=2 Tax=Shewanella RepID=B0TS44_SHEHH Length = 298 Score = 320 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 113/276 (40%), Positives = 156/276 (56%), Gaps = 10/276 (3%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 AI L LL SSA++ A W+ P A +IGS++NGC+ GA+ LP+ YQV+R Sbjct: 24 LAIVGLNLLVSSAAI-ANLWEAADTPYVSQASAIGSYANGCLKGAEALPLNGNGYQVIRP 82 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 ++RY+GHP+L+ FI++ S+ ++ LG +LI DM MP GG F GH SHQ GLDVDI+L Sbjct: 83 QRQRYYGHPELIEFIEQYSTSLNRLGSDDILIADMSMPRGGNFTQGHTSHQIGLDVDIWL 142 Query: 124 QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK 183 +L ++ +P L LV++ + + LW ++KLAAQD V RIFV+P IK Sbjct: 143 KLTAEPLLDSEREQPTPLKLVNQKQFKLDTQLWSNTQTQMVKLAAQDARVARIFVSPVIK 202 Query: 184 QQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF 243 Q LC D WL KVRPW+ H HMHVRLRCP C +Q P G+GC +EL W Sbjct: 203 QHLCDLGLDDDAWLEKVRPWWGHTYHMHVRLRCPKGDEFCREQAKIPKGNGC-SELSWWR 261 Query: 244 EPPKPGTTK--------PEKKTPPPLPPSCQALLDE 271 + P++ P C+A++ Sbjct: 262 QRLTQAKVAKVEKPKVKPKQVKAKRKPKLCEAVVAA 297 >UniRef50_B8CUQ4 Penicillin-insensitive mureinendopeptidase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUQ4_SHEPW Length = 289 Score = 316 bits (811), Expect = 4e-85, Method: Composition-based stats. Identities = 104/247 (42%), Positives = 144/247 (58%), Gaps = 1/247 (0%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ALL S+ A PW+++ P G A ++GS++NGC+ G LP ++V+R ++R Sbjct: 18 LSAALLLFSSITFANPWEQVNSPFDGVAAAVGSYANGCLAGGKALPSSGPGFEVIRPERR 77 Query: 67 RYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLP 126 RYFGHP L+ FI+ SS +LI DM MP GG F GH+SHQ GLDVDI+ +L Sbjct: 78 RYFGHPTLISFIEDYSSHFRQYSKSNLLIADMSMPRGGNFTHGHSSHQIGLDVDIWFKLA 137 Query: 127 KTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL 186 + T QL +P+ D+V + S LW+ + +++LAA+D V RIF++P IKQ L Sbjct: 138 EQALTVMQLAQPEPFDIVHTKQFRLDSKLWQAQHTRMVQLAAEDSRVARIFISPVIKQHL 197 Query: 187 CLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPP 246 C + WL KVRPW+ H HMHVRL CP D ++C +Q P G+GC EL W + Sbjct: 198 CDMDLANDAWLNKVRPWWGHTYHMHVRLHCPEDDVDCIEQAPIPKGNGCN-ELSWWKQQY 256 Query: 247 KPGTTKP 253 KP Sbjct: 257 TQPKLKP 263 >UniRef50_C5SDV9 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDV9_CHRVI Length = 289 Score = 316 bits (810), Expect = 5e-85, Method: Composition-based stats. Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 8/278 (2%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + + + L+L + ++ ATPW + +P G + G +NGCI GAD LP Y Sbjct: 12 LGRRVVLALSLCLPTLTVLATPWGDVQRPSSGLTEVFGGAANGCIGGADALPETGPGYVS 71 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + RY+GHPDL+ F+ L G V+IGD+ P GGR + H SHQ GLDVD Sbjct: 72 IRRYRNRYYGHPDLIRFVHDLGRGQQQRGSQFVMIGDLSQPRGGRMSSSHRSHQNGLDVD 131 Query: 121 IFLQLPKTRWTSAQL--LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 ++ L + + QL R +V+ G VS W F+LI+ AA+ V RIFV Sbjct: 132 VWFTLANSPTAARQLMDDRADPASMVAP-GGRTVSRHWGASQFALIESAARHPRVDRIFV 190 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAE 238 N AIKQ+LC A DR WLRKVRPW+ H AH HVRL CPADS CEDQ P GDGCG + Sbjct: 191 NAAIKQELCQSARGDRAWLRKVRPWWGHDAHFHVRLACPADSPSCEDQSPVPPGDGCGED 250 Query: 239 LQSWFEPPKP-----GTTKPEKKTPPPLPPSCQALLDE 271 L W K + P +P +C+A+L + Sbjct: 251 LAWWLSDEVLSGRARSKGKTTRAAEPEMPFACRAVLTD 288 >UniRef50_C4LE77 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LE77_TOLAT Length = 265 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 142/257 (55%), Gaps = 2/257 (0%) Query: 16 ASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 + + PW P GSA++IG ++ GC+ GA LP YQ++R Q+R +GHP + Sbjct: 7 VAAMSNPWAHQVTPSTGSAEAIGGYAAGCLQGAVALPEHGTGYQILRPRQKRIYGHPIMQ 66 Query: 76 MFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL 135 ++ L+ Q G+ +L+GDM M GG F+ GH SHQ+GLD D + + ++ Sbjct: 67 QYVLDLARQSKKAGLPDILVGDMAMAKGGPFSSGHRSHQSGLDTDFWFRFAAKPLSARTR 126 Query: 136 LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG-TDR 194 + LD+V V + +L+KLAAQD V RIFVNP IKQ +C G TD Sbjct: 127 NTIKPLDMVDFRRNKVNKNF-GQQQVTLLKLAAQDPRVERIFVNPPIKQAMCDQFGATDP 185 Query: 195 DWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPE 254 WL K+RPWF H AH HVRL CP S +CE Q P G GCGAELQSW P ++KP Sbjct: 186 TWLGKLRPWFGHSAHFHVRLHCPVGSKDCEPQKPYPEGSGCGAELQSWLTKPAMVSSKPL 245 Query: 255 KKTPPPLPPSCQALLDE 271 P LP C+ LL Sbjct: 246 PNRMPDLPDRCEILLSN 262 >UniRef50_B1KR39 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KR39_SHEWM Length = 278 Score = 306 bits (785), Expect = 4e-82, Method: Composition-based stats. Identities = 110/235 (46%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 + +A PW ++ QP GS+ +IGS+SNGC+ G L + E +QV+RT ++RY+GH DLV Sbjct: 18 AASANPWARVEQPFTGSSDAIGSYSNGCLSGGVGLASEGEGFQVIRTSRKRYYGHADLVN 77 Query: 77 FIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLL 136 FI ++ + G+ +LIGDM MP GG F GH SHQ GLDVDI+L+ + T+ ++ Sbjct: 78 FINEYAATLKQAGLDDLLIGDMSMPRGGHFTSGHRSHQIGLDVDIWLRQANRKLTAQEIE 137 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 P+ LD+V+R V + W +I+LAA DK V RIFV+P IKQQLC A W Sbjct: 138 NPKKLDVVNRKAFKVNAN-WSGAHGVMIRLAALDKRVARIFVHPVIKQQLCSQAEQGSSW 196 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTT 251 L+KVRPW+ H +HMH+RL+CP +S CE Q LPP GDGC EL W E Sbjct: 197 LQKVRPWWGHSSHMHIRLKCPDNSQLCEGQDLPPEGDGCD-ELSWWQEQMSAPKK 250 >UniRef50_B5ZWT7 Peptidase U6 penicillin-insensitive murein endopeptidase n=50 Tax=Rhizobiales RepID=B5ZWT7_RHILW Length = 358 Score = 306 bits (784), Expect = 5e-82, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 134/276 (48%), Gaps = 14/276 (5%) Query: 13 ASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHP 72 S A + + P G AQ IG ++ GC+ GA LP ++ MR + R +G+P Sbjct: 36 TPSPGSAKGQFGAVGLPTQGPAQPIGFYAKGCMTGAVALPADGPTWEAMRLSRNRRWGNP 95 Query: 73 DLVMFIQRLSSQ-VSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRW 130 ++ ++RLS V G +L+GD+ P GG GHASHQ GLD D++ +P R Sbjct: 96 AMISLLERLSQDGVKYAGWPGLLVGDIAQPRGGPMFNGHASHQIGLDADVWFTPMPARRM 155 Query: 131 TSAQLLRPQALDLVSRDGK-HVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD 189 T+ + ++ +D V +W L+ LAA +V RIFVNPAIK+++C Sbjct: 156 TAKEREDLPFTTMLQKDKFLTVDPNVWTQSRARLLMLAASYPEVERIFVNPAIKKKMCDT 215 Query: 190 AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----- 244 DR L K+RP + H +H H+R++CPA + C Q +GDGC L WF Sbjct: 216 WTGDRTNLGKLRPEYGHDSHFHIRIKCPAGAAGCTPQAPVAAGDGCDKSLAWWFTPAPWA 275 Query: 245 ------PPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 P P + LP +C A+LD + Sbjct: 276 PPKPPKPGAKPPKPPREMMVSDLPKACAAVLDAASV 311 >UniRef50_B3PXK8 Murein endopeptidase protein n=8 Tax=Rhizobium/Agrobacterium group RepID=B3PXK8_RHIE6 Length = 367 Score = 304 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 130/276 (47%), Gaps = 14/276 (5%) Query: 13 ASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHP 72 S A + ++ P G AQ IG ++ GC+ GA LP +Q MR + R +G+P Sbjct: 36 TPSPGSAKALFGGVSLPTQGPAQPIGFYAKGCMTGAVALPTDGPTWQAMRLSRNRRWGNP 95 Query: 73 DLVMFIQRLSSQVS-NLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRW 130 + ++R S + G +L+GD+ P GG GHASHQ GLD DI+L +P R Sbjct: 96 VTIALLERFSQDAAKYAGWPGILVGDIAQPRGGPMASGHASHQIGLDADIWLTPMPARRM 155 Query: 131 TSAQLLRPQALDLVSRDGK-HVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD 189 T+ + ++ ++ + +W L+ LAA V RIFVNPAIK+++C Sbjct: 156 TAEEREDLPFTSMLQKNKFLTIDPRVWTESHARLLMLAASYPQVERIFVNPAIKKKMCDT 215 Query: 190 AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----- 244 DR L K+RP + H +H H+RL+CP C Q +GDGC L WF Sbjct: 216 WTGDRTNLGKLRPEYGHDSHFHIRLKCPPGVAGCTPQAPVAAGDGCDKSLAWWFTPAPWA 275 Query: 245 ------PPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274 P + LP +C A+LD + Sbjct: 276 PPKPPKPDAKPPKPSREMMVSDLPKACAAVLDAASV 311 >UniRef50_Q1YF26 Penicillin-insensitive murein endopeptidase n=2 Tax=Aurantimonadaceae RepID=Q1YF26_MOBAS Length = 331 Score = 300 bits (768), Expect = 3e-80, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 135/265 (50%), Gaps = 10/265 (3%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 A + + S G +S GC+ GA LP +Q MR + R +GHP+ + F+ Sbjct: 33 AKQIFGSQHAAAALPSASYGFYSKGCLAGAAQLPADGPTWQAMRLSRDRRYGHPNTIDFL 92 Query: 79 QRLSSQVSNLG-MGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQLL 136 +RLS + + G +L+GD+ GG GHASHQ GLD DI+L +P R T Sbjct: 93 ERLSREAAARGVWPGLLVGDISQARGGPMPSGHASHQIGLDADIWLQPMPARRLTPEARE 152 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 ++ V +W LI++AA+D V RIFV+P IK++LC G +R W Sbjct: 153 DFPFRSVLKPGTFQVDDRVWTSNYRDLIRMAAEDPRVQRIFVHPGIKKKLCETTGRERAW 212 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPKPGTTK 252 L KVRP++ H H HVRL C S C +Q SGDGCG +L WF +PPKPG Sbjct: 213 LNKVRPYYGHHEHFHVRLFCQPGSPGCTEQRATGSGDGCG-DLDWWFDVALQPPKPGGKP 271 Query: 253 PEKKTP---PPLPPSCQALLDEHVI 274 + K P +P +C+ + + + Sbjct: 272 AKPKPPMMLADMPNACRQVANAPAL 296 >UniRef50_B0UCG4 Peptidase U6 penicillin-insensitive murein endopeptidase n=13 Tax=Alphaproteobacteria RepID=B0UCG4_METS4 Length = 311 Score = 300 bits (768), Expect = 3e-80, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 150/263 (57%), Gaps = 8/263 (3%) Query: 17 SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVM 76 + A + + T P AQ+IGS++ GC+ GA+ LP +QVMR + R +GHP LV Sbjct: 48 TPAKALFGRATTPASLPAQAIGSYARGCVAGAEALPTNGPTWQVMRLSRNRNWGHPVLVA 107 Query: 77 FIQRLSSQV-SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQ 134 F++R++S+ G +L+GDM P GG GHASHQ GLD D++L +P + A+ Sbjct: 108 FLERIASKAPGRAGWPGLLVGDMSQPRGGPMLTGHASHQLGLDADVWLTPMPDRTLSRAE 167 Query: 135 LLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDR 194 A ++V D + + +W+PE LI++ A+ +V RIFVNPAIK LC +AG++R Sbjct: 168 REEISATNVVRADRRDIDPAVWRPEHGRLIRMVAEQPEVARIFVNPAIKLALCREAGSER 227 Query: 195 DWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPK------P 248 WL KVRP + H H H+RL CP+ C+DQ PPSGDGCGAEL WF P Sbjct: 228 RWLTKVRPMYGHNYHFHIRLECPSGDHACKDQEPPPSGDGCGAELDYWFSDAVLNPKPGP 287 Query: 249 GTTKPEKKTPPPLPPSCQALLDE 271 T LP +C+ +L Sbjct: 288 KGKPKPPMTMAALPEACRGVLKA 310 >UniRef50_Q2W4C2 Murein endopeptidase n=3 Tax=Magnetospirillum RepID=Q2W4C2_MAGSA Length = 280 Score = 296 bits (759), Expect = 4e-79, Method: Composition-based stats. Identities = 112/270 (41%), Positives = 145/270 (53%), Gaps = 6/270 (2%) Query: 4 TAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRT 63 A +LA A++A W I QP G A IGS + GC+ GA L +QV+R Sbjct: 10 LAALVLATGAAAAESGQQQWSGIGQPATGPASVIGSPAAGCLKGAVPLAEDEHSFQVLRP 69 Query: 64 DQRRYFGHPDLVMFIQRLSSQVSNLG-MGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIF 122 + R++GHP + F+ L+ G G +LIGDM P GG GH SHQ GLDVDI+ Sbjct: 70 SRNRHWGHPATIRFVGDLARATKGEGISGPLLIGDMAQPRGGPMPAGHGSHQNGLDVDIW 129 Query: 123 LQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAI 182 +LP + A++ P+ + +V G + W P L++LAA+ V RIFVNPAI Sbjct: 130 FRLPAKPLSRAEIETPKPVSMV--YGTEIDEDAWTPAQARLLELAARAPQVDRIFVNPAI 187 Query: 183 KQQLCLD--AGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 K+ +C A DR WLRK+RPW+ H H HVRL CPADS +CE Q P GDGCG EL+ Sbjct: 188 KKAMCRAVPADGDRSWLRKLRPWWGHDEHFHVRLSCPADSPDCERQKPMPEGDGCGEELE 247 Query: 241 SWFEPPKPGTTKP-EKKTPPPLPPSCQALL 269 SW P PLP +C L Sbjct: 248 SWSARPTWPAPPSRPHHQSRPLPEACAGLF 277 >UniRef50_D2LD59 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD59_RHOVA Length = 427 Score = 295 bits (756), Expect = 8e-79, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 142/277 (51%), Gaps = 15/277 (5%) Query: 13 ASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHP 72 A+ A + +P +S+G ++ GC+ GA LP +Q MR + R++G+P Sbjct: 146 VLKATPAKLLFGAAREPAKMETRSVGFYAKGCLAGAAQLPENGPVWQGMRVSRNRHWGNP 205 Query: 73 DLVMFIQRLSSQV-SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWT 131 LV FI++ + + G +LIGDM MP GG GHASHQ GLDVDI+ + R Sbjct: 206 VLVTFIEKFAKDAKAKDGWPGLLIGDMSMPRGGPMPFGHASHQVGLDVDIWYKPMPGRTL 265 Query: 132 SAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG 191 + +D V D HV W P+ L++ A +VTR+FVNPAIK+ +C + Sbjct: 266 AVDEREQMKMDSVLLDPVHVNEQSWTPDHVKLLRRAVSYPEVTRVFVNPAIKKWMCDNVT 325 Query: 192 TDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF----EPPK 247 DR +L K++P H AH HVRL CPA C +QP P+GDGCG L W +P Sbjct: 326 DDRGFLHKIQPIMGHDAHFHVRLACPAGDEGCRNQPPLPAGDGCGGGLDKWIAKLSKPVV 385 Query: 248 PGTTKPEKKTPPP----------LPPSCQALLDEHVI 274 P KP + P LPP+C A+L+ I Sbjct: 386 PVAPKPAVASAPAKPKAGITMAQLPPACVAVLNAPSI 422 >UniRef50_C6QEN3 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEN3_9RHIZ Length = 491 Score = 294 bits (754), Expect = 1e-78, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 147/288 (51%), Gaps = 19/288 (6%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMR 62 A A + + +P P +A++IG +S GC+ GA+ LPI +Q MR Sbjct: 139 SLKAGGAAPKWPEFVGAKKLFGVVKKPAPLAARAIGYYSRGCLSGAEALPIDGPAWQEMR 198 Query: 63 TDQRRYFGHPDLVMFIQRLSSQVSNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI 121 + R +GHP L+ I+ + G +L+GD+ P GG GHASHQ GLD DI Sbjct: 199 LSRNRNWGHPQLISLIKTFADDAQKQDGWPGLLVGDIAQPRGGPMITGHASHQVGLDADI 258 Query: 122 FL-QLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 +L +PK R T + A ++ G V ++ + SLIK AA +V RIFV+P Sbjct: 259 WLTPMPKRRLTRKERETLNATSMLDDTGVAVDPKVFTDKQVSLIKRAASYPEVERIFVHP 318 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 AIK+ LC AGTDR WL KVRP++ H H H+R++CPAD C+ QP P DGCG E+ Sbjct: 319 AIKKALCTAAGTDRQWLGKVRPFYGHYYHFHMRIKCPADFAGCKPQPPPTGDDGCGKEVD 378 Query: 241 SWFE---PPKPGTTKPEKKTPP--------------PLPPSCQALLDE 271 W P KP + P K P LPP C+ALL Sbjct: 379 QWLSKVIPAKPSMSPPIPKPPQSVSVRPPAPPIMLADLPPECRALLAA 426 >UniRef50_A0KJ73 Penicillin-insensitive murein endopeptidase n=2 Tax=Aeromonas RepID=A0KJ73_AERHH Length = 260 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 98/265 (36%), Positives = 144/265 (54%), Gaps = 9/265 (3%) Query: 1 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + +A L +SA LA +P P A++IG +S GC+ LP+ YQV Sbjct: 3 VGSLMLATTLLFMASAFLA--------EPHPRQAEAIGGYSAGCLKNGVALPLTGPGYQV 54 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +RT + RY+GHP+L+ ++ L++Q GM + I D+ M GG F GH SHQTGLD D Sbjct: 55 IRTKRLRYYGHPELIAYLTTLANQTRMAGMPDLYIADLAMAHGGPFTSGHRSHQTGLDAD 114 Query: 121 IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 I+ ++ ++ + P+ L+ V+ + P+ +L++LAA +V RIF+NP Sbjct: 115 IWFRMANQPISTWEQDAPKEWALIDEPSYRVLPGRFGPQQLNLLRLAASKPEVARIFINP 174 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 +K ++C A D W+ K+RPW H +H HVRLRCPA S +C+ Q P G+GCGAEL Sbjct: 175 VLKAEVCKRA-PDEPWVGKLRPWVGHFSHFHVRLRCPAGSPDCQPQAPIPPGNGCGAELA 233 Query: 241 SWFEPPKPGTTKPEKKTPPPLPPSC 265 SW + P LP C Sbjct: 234 SWLKDKPQLPKVSMAYHKPRLPARC 258 >UniRef50_Q3SVT3 Murein endopeptidase. Metallo peptidase. MEROPS family M74 n=24 Tax=Alphaproteobacteria RepID=Q3SVT3_NITWN Length = 350 Score = 293 bits (750), Expect = 4e-78, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 139/267 (52%), Gaps = 10/267 (3%) Query: 16 ASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 A A + + T P G+ IG ++ GCI GA+ LP+ +QVMR + R + HP +V Sbjct: 80 ALAAKQLFGRKTLPAAGAPYVIGFYARGCIAGAEALPVTGPTWQVMRLSRNRNWAHPAMV 139 Query: 76 MFIQRLSSQVSN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSA 133 ++R+S++ G +LIGDM P GG GHASHQ GLD D++L +P + Sbjct: 140 ALLERVSAKARRDAGWPGLLIGDMAQPRGGPMLTGHASHQIGLDADVWLTPMPNRLLSRN 199 Query: 134 QLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTD 193 + A+ +V RD + W P +I+ AA++ V RIFVN AIK+ LC +A D Sbjct: 200 EREEMSAVMMVRRDRLDIDPRAWTPSHLGVIRAAAREPSVERIFVNAAIKKALCREAKGD 259 Query: 194 RDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGA-ELQSWFEPPK----- 247 R WL KVRP + H H H+R++CP S +CE QP P +GCGA +L WF Sbjct: 260 RSWLSKVRPMYGHDYHFHIRIKCPPGSPQCESQPPPGPAEGCGAQDLAYWFSDAVLHPKP 319 Query: 248 --PGTTKPEKKTPPPLPPSCQALLDEH 272 T LP +C+ +L Sbjct: 320 PKTPPKPKPPITLSQLPTACRQVLAAP 346 >UniRef50_Q607R5 Penicillin-insensitive murein endopeptidase, truncation n=1 Tax=Methylococcus capsulatus RepID=Q607R5_METCA Length = 279 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 138/277 (49%), Gaps = 7/277 (2%) Query: 1 MNKTAIALLALLASSA--SLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHY 58 M +AL +L++ + A+ W ++ P + ++IG GC+ G LP + E Y Sbjct: 1 MPSNRLALFVVLSAFVSHAAASRDWGDVSSPTAATPEAIGETGAGCLAGGVRLPPEGEGY 60 Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 +VM ++ R +GHPDL+ I L + G + +GD+ P GG GH SHQTG+D Sbjct: 61 KVMHLERNRNYGHPDLIRSIIDLGHATAQGHWGELHVGDLSQPRGGPMRFGHRSHQTGID 120 Query: 119 VDIFLQLPKTRWTSAQ--LLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRI 176 D++ L +A A L++ D + LW +++ AA+D V RI Sbjct: 121 ADVWFALDPNLIRNADGLRSNIPAPSLLTPDQTRLNHMLWDIRHARVLETAARDPHVDRI 180 Query: 177 FVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCG 236 FVN IKQ+LC DR WLRK+RPW +H H H+RL CP DS +C Q GDGC Sbjct: 181 FVNAHIKQELCRSVRGDRSWLRKIRPWHRHDDHFHMRLACPTDSPDCVPQKPLEPGDGCD 240 Query: 237 AELQSWFEPPKPGTTKPEKKTP---PPLPPSCQALLD 270 A L W P P P LP C+A+L+ Sbjct: 241 ASLDWWLSLPPLRPLPDNHHGPAPSPALPRVCRAVLN 277 >UniRef50_D2LBB0 Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBB0_RHOVA Length = 317 Score = 293 bits (749), Expect = 5e-78, Method: Composition-based stats. Identities = 102/264 (38%), Positives = 144/264 (54%), Gaps = 12/264 (4%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 A + I P Q+IG + GC+ GA + + + +Q MR + RY+GHP L+ +I Sbjct: 41 AKKAFGAIKVPPALPPQAIGRYDLGCVAGAQKIAMNGDGWQAMRLSRNRYWGHPALISYI 100 Query: 79 QRLSSQVSN-LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ-LPKTRWTSAQLL 136 + L+ V G+ +L+GDM P GG GGHASHQ+G+DVD++ +P ++ Sbjct: 101 ETLARDVKRLDGLPGILVGDMAQPIGGPLLGGHASHQSGIDVDLWYNLMPARTLSAEDRE 160 Query: 137 RPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDW 196 + A + V + V W L+K AA +V+RIFV+PAIK+ LC AG+DR W Sbjct: 161 KFAATNYVDQTTLTVDPARWTDAQTKLVKRAASYPEVSRIFVHPAIKKALCDSAGSDRVW 220 Query: 197 LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKP-------- 248 L+K+RPW++H H+HVRL CPA S C QP + DGCG EL +WF + Sbjct: 221 LQKIRPWYKHDDHLHVRLSCPAGSNGCVSQPAIKADDGCGEELDAWFRKLRAPRPKPPKP 280 Query: 249 --GTTKPEKKTPPPLPPSCQALLD 270 KP+ LP CQALLD Sbjct: 281 PKPQPKPKPMLVTDLPGECQALLD 304 >UniRef50_Q0FDN2 Penicillin-insensitive murein endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDN2_9RHOB Length = 297 Score = 293 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 83/269 (30%), Positives = 127/269 (47%), Gaps = 20/269 (7%) Query: 22 PWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRL 81 + ++ P S + GS+S GC+ G + + +QVMR + R +GHPD++ ++ L Sbjct: 29 LFGALSLPSKQSPNAFGSYSKGCLAGGEEMLESGPTWQVMRLSRDRNWGHPDMITLLKNL 88 Query: 82 SSQVSNL-GMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIF-LQLPKTRWTSAQLLRPQ 139 S V+ + IGD+ P GG GHASHQ GLD DI+ L T A+ Sbjct: 89 SKSVAKKTSWNGIYIGDISQPRGGPMISGHASHQLGLDADIWMLPAKNLNLTQARRESIS 148 Query: 140 ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK 199 ++++ S++ K S W E ++K+ A+D V RIFV K +C ++DWL+K Sbjct: 149 SINIRSKNKKTTNSN-WTNEHVDVLKIFAKDPSVDRIFVTAPAKIYMCKHEVGNKDWLQK 207 Query: 200 VRPWFQHRAHMHVRLRCPADSLECEDQPLPP-----SGDGCGAELQSWFEPPKPG----- 249 +RP++ H H HVR++CP DS C+ Q G GC L W Sbjct: 208 IRPYWGHNFHFHVRIKCPKDSKLCKTQKPSVQYLSKGGTGCDETLNWWITKALEPVKIDP 267 Query: 250 -------TTKPEKKTPPPLPPSCQALLDE 271 P + LPP C ++L+ Sbjct: 268 KKDKPKQKKHPTEYMMNELPPQCMSVLNN 296 >UniRef50_C8N8M3 Murein endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8M3_9GAMM Length = 317 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 10/243 (4%) Query: 6 IALLALLASSASLAATP-----WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV 60 + L +L ++A+L+ P W PV + Q++GS +NGC +GA L + + + Sbjct: 40 LTLFLVLCATAALSKDPDKVNVWSMQRAPVGATPQAVGSAANGCQLGAQMLEAEGDGFIS 99 Query: 61 MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD 120 +R + R++ P + ++R+ +V+ + +LIGD+ P GG GH+SHQ GLDVD Sbjct: 100 IRRWRNRFYSQPITLKLVRRVGQEVATMHGAKILIGDLSQPVGGEMPFGHSSHQNGLDVD 159 Query: 121 IFLQ-LPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVN 179 I+ +P ++ P +V +V LW+ + AA + RIFVN Sbjct: 160 IWFYAVPAGSQPDKEVEPP---SMVDGAAGTLVPGLWQAAYRDALYAAATFPETNRIFVN 216 Query: 180 PAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAEL 239 P IK LC +D WL K+RPW H +H HVRL CP S EC Q P GDGC A+L Sbjct: 217 PVIKAHLCDT-ESDTRWLHKIRPWIGHDSHFHVRLNCPPGSPECVTQAAIPPGDGCDADL 275 Query: 240 QSW 242 W Sbjct: 276 YKW 278 >UniRef50_Q16D60 Murein endopeptidase n=38 Tax=Bacteria RepID=Q16D60_ROSDO Length = 309 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 127/268 (47%), Gaps = 13/268 (4%) Query: 15 SASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDL 74 S A + + GS++ GC+ GA LP +Q MR + R + HP+ Sbjct: 43 SLKPAKQLFGAKSAASQSPPAPFGSYAKGCVAGAAQLPETGPTWQAMRLSRNRNWAHPET 102 Query: 75 VMFIQRLSS-QVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTS 132 V F++ LS G + +GD+ P GG GHASHQ GLD DI+L + Sbjct: 103 VSFVKDLSRIAAQQPGWNGLYVGDLSQPRGGPMLSGHASHQIGLDADIWLRPATNLSLSV 162 Query: 133 AQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGT 192 A+ ++ L R+ V+ W P+ +++K AA D V RIF+ P K QLC A Sbjct: 163 AERENISSISL-RRNAGAFVNDNWTPQHAAILKAAASDPRVARIFIFPGAKVQLCNTATG 221 Query: 193 DRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWF--------- 243 DR WLRK+RPWF H H HVRL CP+ S C DQ PP+GDGC A+ Q+W Sbjct: 222 DRSWLRKIRPWFGHHYHFHVRLSCPSGSTGCVDQTPPPAGDGC-ADAQAWVNNILNPPPP 280 Query: 244 EPPKPGTTKPEKKTPPPLPPSCQALLDE 271 +P LP C +L Sbjct: 281 DPNAKPRKPRPPVRLADLPAQCADVLQS 308 >UniRef50_D0LL99 Penicillin-insensitive murein endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LL99_HALO1 Length = 299 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 108/259 (41%), Positives = 151/259 (58%), Gaps = 9/259 (3%) Query: 20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQ 79 +PW KI QP G A++IG + GC+ GA+ LP+ + V+R + R+FGHP L+ +++ Sbjct: 42 DSPWGKIRQPAEGPARAIGGYGAGCVQGAEELPVSGPGFHVVRPRRHRHFGHPVLIAYLR 101 Query: 80 RLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTR-WTSAQLLRP 138 L+S+V G +L+GD+G P GG GH+SHQTGLDVD++ + P + Sbjct: 102 DLASRVRAAGGRDLLLGDLGQPRGGPAPSGHSSHQTGLDVDVWYRDPGHDEQRPLRRRER 161 Query: 139 QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLR 198 +AL S +S P + ++ LAA D+ V RIFVNP IK+ LC AG +RDWLR Sbjct: 162 RALRDRSVVVDGALSAEMAPRVMRVLSLAADDERVARIFVNPVIKRDLCAQAGEERDWLR 221 Query: 199 KVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEK--- 255 K+RPW+ H AH HVRL CP DS EC+ Q P+GDGC E+ W + + K E+ Sbjct: 222 KLRPWWGHDAHFHVRLECPDDSPECKAQAALPAGDGCD-EVSWWLDEERQAERKEERGRY 280 Query: 256 ----KTPPPLPPSCQALLD 270 + P LP +C LLD Sbjct: 281 RKNVRGLPELPAACAPLLD 299 >UniRef50_Q0BS55 Penicillin-insensitive D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BS55_GRABC Length = 276 Score = 263 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 92/244 (37%), Positives = 134/244 (54%), Gaps = 8/244 (3%) Query: 2 NKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVM 61 +K + ++ LL+ S + + P + QPV Q IG NGCI GA LP + +Q + Sbjct: 4 SKLLVGIVMLLSCSGMVLSAP--VLAQPV----QIIGPAGNGCIAGAQRLPDEGPGWQTI 57 Query: 62 RTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDI 121 R D+ ++ P + ++ L++++ G+ + +GDM P GGR GGH SHQ GLDVD+ Sbjct: 58 RRDRSSFWSAPVTINGVKTLATRLHAQGLPDLYVGDMSAPHGGRLPGGHGSHQNGLDVDL 117 Query: 122 FLQLPKTR-WTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP 180 +L L T + + +VS DG + W + +L+ +AA +V R+ VNP Sbjct: 118 YLDLTPRPALTPDERNVLEPPSMVSADGNSLSP-AWTQDTVTLLHMAATLPNVDRVLVNP 176 Query: 181 AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQ 240 IK+ LC DR WL +RPW+ H+AHMHVR RCPA C P PP+GDGC L Sbjct: 177 VIKRALCEQVSGDRSWLHLIRPWWGHKAHMHVRFRCPAGQTLCVQAPPPPTGDGCDTTLA 236 Query: 241 SWFE 244 WF+ Sbjct: 237 WWFQ 240 >UniRef50_A4NYY0 Penicillin-insensitive murein endopeptidase n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NYY0_HAEIN Length = 185 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVP---GSAQSIGSFSNGCIVGADTLPIQSEHYQ 59 KT I AL + + + WQK+ +P+P G A IGS++NGCI+GA LP + E YQ Sbjct: 7 KTTIIFTALFSLNVVASPLDWQKVKRPIPSEDGKASPIGSYTNGCIIGAQALPPKGEGYQ 66 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDV 119 V+R ++ RY+GHP+++ +++RL +V G+ T+L+GD+ MP GGRF GHASHQ GLD Sbjct: 67 VIRMNRNRYYGHPNMIQYLERLGQRVKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDA 126 Query: 120 DIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIF 177 DI+L++ + A + L +V R + V +W +LIKLAAQD +VTRIF Sbjct: 127 DIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIF 184 >UniRef50_C4WGM9 Penicillin-insensitive murein endopeptidase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WGM9_9RHIZ Length = 316 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 17 SLAATPWQKITQPV-PGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLV 75 A + PV QSIG ++ GC+ GA LP ++QVMR + R +GHP ++ Sbjct: 99 MPAKQAFGAQALPVLAQDPQSIGFYAKGCLAGAVALPTDGPNWQVMRLSRNRRWGHPRMI 158 Query: 76 MFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL-QLPKTRWTSAQ 134 +++LS + G +L+GD+ P GG GHASHQ GLD DI+L +PK R+T A+ Sbjct: 159 GLLEKLSRDAAKDGWPGLLVGDISQPRGGPMLTGHASHQVGLDADIWLTPMPKKRFTDAE 218 Query: 135 LLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDR 194 A+ ++ D +V W P +LIK AA +R + + Q+ L G R Sbjct: 219 RESVSAVSMLKPDSLYVDPKKWTPARTALIKHAASYPG-SRAHLRASRHQEGALRHGEGR 277 Query: 195 DWL 197 L Sbjct: 278 QEL 280 >UniRef50_Q6MP34 MepA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MP34_BDEBA Length = 518 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 28/234 (11%) Query: 21 TPWQKITQPVPGS-AQSIGSFSNGCIVGADTLPI-----QSEHYQVMRTDQRRYFGHPDL 74 P T P +Q+IG + G + A + Y+++R ++ +F +L Sbjct: 293 QPRVPETAPAVNKVSQAIGPVNAGRLQNAANMLTYEQAHAPTGYEIIRPKRKTHFATNEL 352 Query: 75 VMFIQRLSSQVSNLGMG-TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSA 133 I ++ G + +GD+ AGG+ G H SHQ GLD D+ + Sbjct: 353 AYIIVKMGLLTKKEIPGYELAVGDLSREAGGKL-GSHKSHQNGLDADVAFFFNNKSF--- 408 Query: 134 QLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTD 193 Q A+ + ++ W L K + + RIF++ A+KQ LC A + Sbjct: 409 QGYFASAVAVNKPHANWMLEPQW-----KLFKEVVGTQLIDRIFIHGALKQALCSHAIAN 463 Query: 194 RDW------------LRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGC 235 + LR++ P H H H+R++C + C P + GC Sbjct: 464 GELTKGDNSSLAAQTLRRLIPEKDHHNHFHLRVKCSKAQVRCRQMAEPVNTTGC 517 >UniRef50_A6G007 Penicillin-insensitive murein endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G007_9DELT Length = 285 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 104/302 (34%), Gaps = 59/302 (19%) Query: 5 AIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD 64 + + A L A W T + S+G + G I + + + V T Sbjct: 3 SALVFAALLLGACATPGRWTDYT------SVSVGKSNEGRIHRPVKMRPRGRGFLVPSTW 56 Query: 65 QRRY--FGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIF 122 + R +G +LV ++R + +V + T+ + D+ GG+ + HASHQ+G DVD+ Sbjct: 57 RERGNQWGTTELVGMVERAAGKVRDQKRATLGVADLSPKRGGK-SIWHASHQSGRDVDLI 115 Query: 123 LQLPKTRWTSAQLLRPQALDLVSRDG------------------KHVVSTLWKPEIFSLI 164 R + P +++V DG + LI Sbjct: 116 FYTVDERGKTQP---PPEVEMVHFDGSGEPFIPRHMRTTGYEEPTWETRRFDDARNWLLI 172 Query: 165 KLAAQDK--DVTRIFVNPAIKQQLCLDAGTD----------RDWLRKVRPWFQHRAHMHV 212 + D+ V IFV+ A++ ++ A R+ +R+ H H HV Sbjct: 173 EALLSDRAVRVQWIFVSNALEARMLRWAERHDRPRWLIEYGREIMRQPGASAPHDDHFHV 232 Query: 213 RLRCPADSL--ECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLD 270 R+ C CED W K ++ P L +ALL Sbjct: 233 RVYCSRADRALGCEDTGPI------------WQHEKKTYKYAGPERYDPNLT---RALLA 277 Query: 271 EH 272 Sbjct: 278 RP 279 >UniRef50_D0LLH2 Peptidoglycan-binding lysin domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH2_HALO1 Length = 377 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 80/217 (36%), Gaps = 32/217 (14%) Query: 26 ITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQV 85 +PV G QS+GS G +V LP Y R R +G + I+R + V Sbjct: 173 EGRPVAG--QSVGSVVRGRLVNGMQLPE-GRGY--YRRRPHRAWGASHTIHHIRRAIASV 227 Query: 86 SNLGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDL 143 N V IGD+ GG+ H SHQ+G DVDI L K R Sbjct: 228 RNRLPKVHEVAIGDISTHDGGQL-ADHRSHQSGRDVDIGLYYKKRP-------RGYPKSF 279 Query: 144 VSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK---- 199 + D +++ I +L + V +F++ ++ L A RK Sbjct: 280 IRGDQQNLDLQATWALIEALANTSKVAGGVDIMFLDYDLQGHLYKWAKKHGVSKRKLGEI 339 Query: 200 -------------VRPWFQHRAHMHVRLRCPADSLEC 223 VR H H+HVR +CP +C Sbjct: 340 LQYPRGESSASGLVRHEPGHATHVHVRFKCPKSDEKC 376 >UniRef50_A6G7X3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7X3_9DELT Length = 610 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 80/227 (35%), Gaps = 36/227 (15%) Query: 30 VPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN-- 87 V A S+GS +NG I A P + Y+ R + + +Q + Sbjct: 397 VREDAVSVGSPNNGSIENAIQFPRNDDLYK--RRYPNIMWCGGHMAKHLQWAIASFRYNY 454 Query: 88 LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRD 147 G +++ DM GG F H SHQ+G DVDI+L K + QL RD Sbjct: 455 EFEGEIVVADMSKKKGGHFPP-HKSHQSGRDVDIWLPTLKGVYKKNQLN--------DRD 505 Query: 148 GKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAG---------------- 191 + ++ ++ + +V +F+ + ++ A Sbjct: 506 YRPQSEEADWFALYGFLQALHETGEVHAVFLAYELHDRVYQAAKIMGATDEELDAMIAYP 565 Query: 192 ---TDRDWLRKVRPWFQHRAHMHVRLRCPADSL--ECEDQPLPPSGD 233 R L + P H H+HVR +C C ++ GD Sbjct: 566 RGEHHRKSLLQHSP--GHTHHVHVRFKCSRADKEAGCSNRLAHGPGD 610 >UniRef50_A0LM11 Peptidoglycan-binding LysM n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM11_SYNFM Length = 647 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 30/205 (14%) Query: 27 TQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 Q S G NG +V P Q YQ+ ++ R + P++V + V Sbjct: 28 VQQTEAVTASYGQPYNGRLVNGIPFPTQFPGYQL--REEERTYTTPEIVGAMLDAVEGVR 85 Query: 87 NLGMG--TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLV 144 + IGD GG + H SHQ G DVD+ + R Q + + Sbjct: 86 TRFPETCDLYIGDFSYKYGGG-SMNHRSHQNGRDVDVGMYAKGNRKLD------QFVSMN 138 Query: 145 SRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDRDWLRKV- 200 L P+ + L++ + + V IF++ +++ L A G D +L V Sbjct: 139 -------EENLDVPKTWCLVEGIIRSQRVQYIFLDRRVQRLLYDYAVSQGADAAYLDHVF 191 Query: 201 --------RPWFQHRAHMHVRLRCP 217 + H H+HVR P Sbjct: 192 GNVRGSLIQHVGNHHDHIHVRFFTP 216 >UniRef50_A9FM08 Exported murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM08_SORC5 Length = 350 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 25/243 (10%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN-LGMG 91 S G+ + G + GA L + + R +G P LV ++R + QV+ G Sbjct: 113 KPLSKGAPNRGRLTGAVRLRSSR---HLKTREGARTWGLPVLVKTLRRAAFQVAKKHGDS 169 Query: 92 TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHV 151 +L+GD+ AGG + GH SHQTG D D+ + ++ + + R A D Sbjct: 170 ALLVGDLSARAGGALD-GHNSHQTGRDADVGFYVVNSKGKNLRTDRFVAFDDEGNAIGLP 228 Query: 152 VSTLWKPEIFSLIKLAAQDKD--VTRIFVNPAIKQQLCLDAGTDRD----------WLRK 199 + ++L++ +D+ V +FV A++ +L A R + Sbjct: 229 GARFDDARNWALVQALLEDRQAGVKYLFVTDALRARLLAHAAKKRVPADLRARAAAAMMS 288 Query: 200 VRPWFQHRAHMHVRLRCPADSLE-CEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTP 258 R H H H+R+ CP C ++ L C A+ EP K + T Sbjct: 289 PRDADLHNDHFHIRVMCPPSMRGACIEESLARPA--CAAD-----EPKKALDSAAPAATE 341 Query: 259 PPL 261 P + Sbjct: 342 PDI 344 >UniRef50_A9GHQ4 Hypothetical penicillin-insensitive mureinendopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHQ4_SORC5 Length = 303 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 102/277 (36%), Gaps = 45/277 (16%) Query: 6 IALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQ 65 + L L +A + ++P T P SIG +G I A LP Q Y+++R++ Sbjct: 12 LLGLVALCCAACVGSSP----TPLAPALRGSIGVPHHGVITDAVELPKQGPGYRLLRSNG 67 Query: 66 RRYFGHPDLVMFIQRLSSQV--SNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFL 123 R +G LV +QR +++V + G +++GD+ GG GH SH+TG D D+ L Sbjct: 68 IR-WGTAGLVAAVQRAAAEVALARPGGAPLVVGDLSARYGGATR-GHRSHRTGRDADLLL 125 Query: 124 Q--LPKTRWTSAQLLRPQALDLVSRDGKHVVS------------TLWKPEIFSLIKLAAQ 169 P R + D + R + L+K + Sbjct: 126 YALTPDGRPVRSPGFVAIGPDGLGRISDGAEEPASPRAGAPQYVRFDVEREWLLVKSLIR 185 Query: 170 DKD--VTRIFVNPAIKQQLCLDAGTDRD----------WLRKVRPWFQHRAHMHVRLRCP 217 D V +F+ ++ L A + L + R H H+H+R+ C Sbjct: 186 SPDAHVQWLFLARWLEALLIEYARALGEDPELIWYAESVLLQPRDSTAHADHIHLRVACT 245 Query: 218 ADSLECEDQPLPPSGDGC-GAELQSWFEPPKPGTTKP 253 D GC G Q + P P P Sbjct: 246 PDETL----------SGCLGGGPQWPWLPAVPQLIPP 272 >UniRef50_A6G0F0 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0F0_9DELT Length = 339 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 30/211 (14%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMG- 91 + QS G ++G + LP S + +R R + LV + + G Sbjct: 140 TGQSRGRPTHGWLHDPSRLPHSSHY---LRRRPERTYASAHLVDHTLNAIDRARDQHPGL 196 Query: 92 -TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKH 150 + IGD+ GG GH SHQ+G D+DI + P+ ++D Sbjct: 197 HRLAIGDLSDEDGGPL-SGHHSHQSGRDIDIGFYYRQRP-----ANYPKEFARATKDN-- 248 Query: 151 VVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK----------- 199 + + + +L++ + +D V +IF++ ++ L A D ++ Sbjct: 249 LDADATWALVEALVRTSGKDGGVEKIFLDYEVQGWLYAAARKDGWSKKRLREVFQYPDGR 308 Query: 200 ------VRPWFQHRAHMHVRLRCPADSLECE 224 +R +H H+HVR RC C+ Sbjct: 309 YAKHGMIRHEPKHDDHLHVRFRCVDADESCK 339 >UniRef50_Q08Y50 LysM domain protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08Y50_STIAU Length = 505 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 34/223 (15%) Query: 20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQ 79 W+ P + S+G +G +V P + + V+ + + + + ++ Sbjct: 180 KRRWKDE--PQSLGSVSVGFVESGRLVNGVRFPDGGQDWIVV--SPEKTYATEETITYLS 235 Query: 80 RLSSQVSNLGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLR 137 ++ V + + + GG H SHQ+G DVD+ P Sbjct: 236 QVIRAVRAALPDAPPLRVNQISAKEGGYMRP-HKSHQSGRDVDLGFYYP----------T 284 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDR 194 + + R+ ++ W +L+K DV I V+ +++ L A G D+ Sbjct: 285 AEPIRARDRENHIHLARNW-----ALVKALLAHADVQLILVDRRVQKVLYEYALKSGEDK 339 Query: 195 DWLRK---------VRPWFQHRAHMHVRLRCPADSLECEDQPL 228 WL +R HR H HVR P Sbjct: 340 AWLDSLFHAGFQSLIRHARGHRDHFHVRFFSPRAQELGRRLAP 382 >UniRef50_A9G844 Putative exported endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G844_SORC5 Length = 439 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 82/229 (35%), Gaps = 18/229 (7%) Query: 19 AATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRR--YFGHPDLVM 76 ++ P ++ P A S+G + G + G L + +V+ +G P LV Sbjct: 82 SSGPAREKAAP-QAPASSVGHPNEGRLEGGVRLDTSRKDIRVVPAYAGADVRWGLPALVG 140 Query: 77 FIQRLSSQVSNLGMGTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQL 135 I+R + V+ G VL +GD+ GG H SH++G DVD+ R Sbjct: 141 MIERSARGVAKRFPGAVLDVGDLSRQRGGEV-HRHNSHESGRDVDLGFYALDARGKQVHA 199 Query: 136 LRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDAGTD 193 D + P + L++ D V+ IF++ ++ L A Sbjct: 200 PIFLRFDARLASTNVPGARFDLPRNWLLVQHLLTDPRARVSHIFISDPLRSALIAHAKRI 259 Query: 194 RDW----------LRKVRPWFQHRAHMHVRLRCPADSLE-CEDQPLPPS 231 + + H HMHVR+ CPA C + Sbjct: 260 GVSRALIVRAQLAMMQPTGAESHDDHMHVRISCPAAMRGSCIELAKNAP 308 >UniRef50_D0LT36 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LT36_HALO1 Length = 316 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 26/213 (12%) Query: 33 SAQSIGSFSNGCIVGADTLPIQSEHYQVMRTD--QRRYFGHPDLVMFIQRLSSQVSNLGM 90 + S G+ + G + + L Y++ + +G +LV I R ++ V Sbjct: 68 PSTSCGAANRGSLAESQALARAGIGYKIPEPWWLRGHNYGTAELVGLITRAATTVHLEHA 127 Query: 91 GTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGK 149 G VL + D+ GG GH SHQ+G DVD+ + A + G+ Sbjct: 128 GGVLGVADLSAADGGAL-PGHRSHQSGRDVDLIYYALSPDGLPLEPDGHMAYYGRAGHGR 186 Query: 150 HVVST----------LWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDA------- 190 H + + L++ +D +V IFV+ +++ L A Sbjct: 187 HARAPQFERDIPERYFDLARNWGLVRAMLEDPHAEVEHIFVSSRVRRWLLDYAQRAEEPE 246 Query: 191 ---GTDRDWLRKVRPWFQHRAHMHVRLRCPADS 220 LR+ + H HMHVR+ C A+ Sbjct: 247 ELIAQAAKVLRRPKGVDGHNDHMHVRILCSAED 279 >UniRef50_A6GFS7 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFS7_9DELT Length = 482 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 68/200 (34%), Gaps = 37/200 (18%) Query: 37 IGSFS--NGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNL--GMGT 92 G++ +G + +P ++Y + R +G D V IQ + Sbjct: 298 FGAYDDDSGVLKSGVQMPP-GKYYVLKTPS--RAYGTGDTVRMIQSAINAYRRKWKSSPK 354 Query: 93 VLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVV 152 + IGD+ GG H SHQ G DVDI L + + VS + Sbjct: 355 IHIGDLSRKGGGPLKP-HKSHQHGKDVDIGYVLK--------GDKKDEIRFVSANAN--- 402 Query: 153 STLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWL--------------- 197 L ++LIK +V IF++ I++ L A + Sbjct: 403 -NLDVARTWTLIKAFLDTDEVKYIFMDHTIQKLLYDHAKSKGVSKDTLDEFFQYPRGKGR 461 Query: 198 --RKVRPWFQHRAHMHVRLR 215 +R H H HVR R Sbjct: 462 GHGIIRHSKGHVNHFHVRFR 481 >UniRef50_A6FXN2 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXN2_9DELT Length = 443 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 83/217 (38%), Gaps = 35/217 (16%) Query: 31 PGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGM 90 ++S+G +G + GA + I + ++ + +G V + + + + Sbjct: 241 GQRSESVGFPGSGTLSGAMPM-IDGPG-RELKHTPWKGWGTTITVATLDVILREWARRFP 298 Query: 91 G--TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDG 148 +L+G+M GGR H+SHQ+G DVD+ W + L + +D Sbjct: 299 DRQPILVGNMSSREGGRLKP-HSSHQSGRDVDLSYP---QIWDRKEELNWRKMDSR---- 350 Query: 149 KHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRD--------WLRKV 200 L + +SL+++ + V IF++ +++ L A W+ Sbjct: 351 -----NLDRELTWSLLEILLESGAVEVIFIDSKLQKLLYEYAVQTGRYKKTELKNWMEYP 405 Query: 201 RP----------WFQHRAHMHVRLRCPADSLECEDQP 227 P H H+HVR +C + C+ + Sbjct: 406 SPPGTGDPLIQHVRGHDDHIHVRFKCTSSEGRCQSRS 442 >UniRef50_A6G2U1 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2U1_9DELT Length = 408 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 76/231 (32%), Gaps = 38/231 (16%) Query: 12 LASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGH 71 L ++ + P VP A IG+ G +V A LP Y+ R +G Sbjct: 195 LVYASIVDDVPQNARAALVPPGAHGIGTPQAGVLVAAVQLPP-GPGYE--RRYPNSAWGT 251 Query: 72 PDLVMFIQRLSSQVSNLG--MGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTR 129 V + + +G M GG+ GGH SHQ+G D+DI L L Sbjct: 252 TWAVRHTVAALDHFAARSDYPNPIRVGTMSRQRGGKI-GGHISHQSGRDLDIRLPLRPE- 309 Query: 130 WTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCL- 188 V + + + P LI+ A V+ IF++ +++L Sbjct: 310 --------------VPQSLPPTLRRVDWPATLELIQAFADTGFVSVIFLDYKAQRRLYKA 355 Query: 189 ----------------DAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLEC 223 L VR H H+HVR C EC Sbjct: 356 GQEAGLDDATLGELMQYPRGSAASLGLVRHSPGHADHIHVRFPCGPAEPEC 406 >UniRef50_D0LSR2 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR2_HALO1 Length = 329 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 33/228 (14%) Query: 32 GSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRR--YFGHPDLVMFIQRLSSQVSNLG 89 G++ S G + G ++ LP + E + V R +G +LV + +++ L Sbjct: 56 GTSISYGPSNGGKLIRPALLPERGEGFVVPERWATRGLRYGTDELVSLVVYAGREMARLS 115 Query: 90 MG-TVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALD------ 142 G + + D+ + GG + H SHQTG DVD+ + ++ + + D Sbjct: 116 PGAELAVADLSLLRGGP-SAWHHSHQTGRDVDLLFFVRESDGSPRVMRNMAGFDDDGVAR 174 Query: 143 ---------LVSRDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDAG 191 D + L++ ++ V +F++ +KQ L A Sbjct: 175 VPSGRWDDGRTPEDESIRELRFDAERNWLLVRTLVENPIAPVQFLFISDPLKQLLIDHAR 234 Query: 192 TDRD----------WLRKVRPWFQHRAHMHVRLRCPADS--LECEDQP 227 + L + H H+HVR+ C C D+ Sbjct: 235 ALGEPEALIQRASYLLHQPGDSLPHNDHIHVRIYCAPSDRVHGCRDRG 282 >UniRef50_A9FG49 Putative penicillin-insensitive murein endopeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG49_SORC5 Length = 410 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 36/213 (16%) Query: 27 TQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 P S+G+ + G + +P + ++++ D +G + + + R ++V Sbjct: 108 KDPAALGPMSLGATNAGALFNGVRMPE-GDRWELV--DPAHAWGTRETIDALDRAIAEVH 164 Query: 87 N--LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLV 144 G + IG + GGR + H SHQ G DVDI L Sbjct: 165 RQFPGSPKLYIGHISAREGGRLSP-HKSHQAGRDVDISYFLDARH--------------- 208 Query: 145 SRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDA---GTDRDWLRKV- 200 + + L + ++ ++ + DV I ++ ++++ L A G D+DWL +V Sbjct: 209 RWYQRATAANLDRERTWAFVRALVTETDVELILIDSSVQRLLKEHALKIGEDKDWLDEVF 268 Query: 201 -----------RPWFQHRAHMHVRLRCPADSLE 222 R H H+HVR P Sbjct: 269 QLGSRKPRPLIRHARGHANHIHVRFYSPVAQES 301 >UniRef50_A6G3P5 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3P5_9DELT Length = 467 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 87/238 (36%), Gaps = 38/238 (15%) Query: 7 ALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQR 66 ++ A +SA++AA P + G+ S G + G IV LP + Y + + ++ Sbjct: 248 SVAASAGTSAAVAARPALPLVNIRRGAISS-GKPNRGKIVNGLQLPENPKLYTIRKPEES 306 Query: 67 RYFGHPDLVMFIQRLSSQVSNLGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQ 124 +G + +Q + G ++IG + GGR H+SHQ+G DVDI L Sbjct: 307 --YGSTHTLHNLQLAIANFRQDTGYTGAIVIGAISKKGGGRLRP-HSSHQSGRDVDIRLP 363 Query: 125 LPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQ 184 + + S + + LI+ ++ IF++ + ++ Sbjct: 364 VKAGIKGTLAQD---------------SSEVDWDATWGLIRALVATGEIQYIFLSTSRQK 408 Query: 185 QLCLDAGTDRDWL-----------------RKVRPWFQHRAHMHVRLRCPADSLECED 225 L A VR H +H H+R C ++ CE Sbjct: 409 HLLKAAKRAGASKDMLERVIQHPRKAGTNHGIVRHAKGHTSHFHIRFTCASNESHCES 466 >UniRef50_C7R9R6 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9R6_KANKD Length = 229 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 61/206 (29%), Gaps = 19/206 (9%) Query: 30 VPGSAQSIGSFSNGCIVGADTLPIQSE---HYQVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 + G+ S G + G LP Y + R + H ++ + + Sbjct: 22 YAKESTCYGTTSAGRLEGGVQLPKSGSNFVGYSDIAHLVGRTYVHSEVKDIVIDAYKYLE 81 Query: 87 NLGMGTVL-IGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPK--------TRWTSAQLLR 137 V + G GG F H +H+ GL VD + + + Sbjct: 82 LERPAKVYKYAETGWEKGGEFKP-HKTHRNGLSVDFMTPVINAEGESVHLHTNPANRFGY 140 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDK--DVTRIFVNPAIKQQLCLDAGTD-- 193 D + + + AA+ + + R+ +P ++ L D Sbjct: 141 DIEFDKNGKYNNLKIDYEALAAHIVALDEAAKARGHKLWRVIFDPELQAGLFETQFGDYI 200 Query: 194 --RDWLRKVRPWFQHRAHMHVRLRCP 217 L R W +H H HV P Sbjct: 201 KKNIKLSNRRSWVRHDEHYHVDFEIP 226 >UniRef50_A6GFI1 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFI1_9DELT Length = 414 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 35/196 (17%) Query: 39 SFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQR--LSSQVSNLGMGTVLIG 96 G ++ LP + +Y +G P + I + + + G + IG Sbjct: 234 PPQPGRLLHGRKLPERDSYYI---KRPHNVWGTPRTIRLITQVVAAYERRANGGPQLRIG 290 Query: 97 DMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLW 156 D+ GG GH SHQ G+D+D+ + L + Sbjct: 291 DISKQHGGPM-QGHLSHQEGVDIDVGVVLKGKLADRKHF------------SGATEKNID 337 Query: 157 KPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK----------------- 199 + LI+ +V IF++ ++QL A + +K Sbjct: 338 LQRTWILIEEFLATGEVRYIFLDYKFQKQLYEYAKSQGVSEQKLDEYFQYPRGIGRNHGI 397 Query: 200 VRPWFQHRAHMHVRLR 215 +R W H H+HVR + Sbjct: 398 IRHWRGHVNHLHVRFK 413 >UniRef50_Q1D9Z6 LysM domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D9Z6_MYXXD Length = 598 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 69/223 (30%), Gaps = 35/223 (15%) Query: 20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQ 79 A W+ + ++G +G +V A P Q + + V+ + + V ++ Sbjct: 141 ARRWKDE--ISSLGSMAVGFAHSGRLVNARQFP-QGDDWIVVTPAGA--WATEETVNYLA 195 Query: 80 RLSSQVSNLGM--GTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLR 137 V + + M GG H SHQ G DVD+ P Sbjct: 196 DAIRDVRARFPNAPPLRVNGMSHKEGGHMRP-HKSHQNGRDVDVGFYYP----------- 243 Query: 138 PQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLD---AGTDR 194 + + + + I+ DV I V+ +++ + AG D+ Sbjct: 244 ----TVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDK 299 Query: 195 DWLRK---------VRPWFQHRAHMHVRLRCPADSLECEDQPL 228 WL VR HR H H+R P Sbjct: 300 AWLDSIFNDGPMGIVRHARGHRDHFHIRFHNPRAQELGRRVQP 342 >UniRef50_A6FZJ3 LysM domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZJ3_9DELT Length = 435 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 78/226 (34%), Gaps = 42/226 (18%) Query: 23 WQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRY---FGHPDLVMFIQ 79 W P A S G + G IVG L R ++ + + +V Sbjct: 207 WMAAVSP---GALSHGHPNKGKIVGEPCLLPDHPALYTRRFERIAHGSSYAVGVIVTAFA 263 Query: 80 RLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQ 139 G V++G + P G RF H SHQTG DVDI L L W + + + Sbjct: 264 NFRRDTGYQG--EVIVGSVSRPHGRRFPP-HRSHQTGRDVDIRLPLL--PWFTPHVEPAE 318 Query: 140 ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRD---- 195 + ++ LI V IF++ +++ L A + Sbjct: 319 -------------EEVDWRALWGLIDAFLATGQVEMIFLDHYMQRPLYYAALSMGATPEE 365 Query: 196 ------WLRK--------VRPWFQHRAHMHVRLRCPADSLECEDQP 227 W R+ +R H H+HVR+RC + +C + Sbjct: 366 LDEIITWPRRDGGKGKKIIRHSKGHEGHIHVRIRCGPEEPDCRTRK 411 >UniRef50_Q21G72 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q21G72_SACD2 Length = 227 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 35/242 (14%) Query: 3 KTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEH---YQ 59 + + ++ L S +Q G+ + G I + LP + + Y Sbjct: 2 RLTLLIIILFVGSNCSLTQ---------ANKSQCYGTTAQGRIEHSVKLPAKGTNFVSYS 52 Query: 60 VMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVL-IGDMGMPAGGRFNGGHASHQTGLD 118 + R + H D+ I ++ + G+ GG+F H +HQ GL Sbjct: 53 ELAGALGRTYVHADVAKIILAAYDSLALSHPNKAYKYAETGLKHGGKFKP-HKTHQNGLS 111 Query: 119 VDIFLQLPKTRWT---------SAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQ 169 VD + + R + + + + + +L K A Q Sbjct: 112 VDFMVPVTNPRGESVHLPTHAFNRLGYDIEFDNNSQYKNLSIDYPAMAAHLVALDKAAKQ 171 Query: 170 DK-DVTRIFVNPAIKQQLCLDAGTDRDWLRKV-----RPWFQHRAHMHVRLRCPADSLEC 223 +TR+ +P ++ +L + + R W +H H HV P C Sbjct: 172 RGFKLTRVIFDPQLQPELFKTPLG-AYLKQHIVFSTKRAWVRHDEHYHVDFAIP-----C 225 Query: 224 ED 225 + Sbjct: 226 KP 227 >UniRef50_Q1N8Y8 TraG n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Y8_9SPHN Length = 1091 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 25/194 (12%) Query: 21 TPWQKITQPVPGSAQSIGSFSNGCIVGADT--LPIQSEHYQVMRTDQRRYFGHPDLVMFI 78 P + P + G + G LP E ++ ++ F ++ + Sbjct: 919 APTRPEALPHGVADAPHGVPGAP-LSGPVDVVLPRSGEGFRSY-SNAAHQFATAGMIGEL 976 Query: 79 QRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRP 138 + S G V IGD+ GG GH +H+TG +VDI + P Sbjct: 977 EASSRAWVARGGAPVNIGDISRAGGGDM-PGHETHETGRNVDI------RPFRRDGQNEP 1029 Query: 139 QALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLR 198 D W + ++ +F +P + ++ G + Sbjct: 1030 VNWRSPDYDRNAT--REWIQMMRE------RNPQARVLFNDPELIREGLAQRGDRPGAPQ 1081 Query: 199 KVRPWFQHRAHMHV 212 H H+H+ Sbjct: 1082 H------HDNHLHL 1089 >UniRef50_A9AWE1 Peptidoglycan-binding domain 1 protein n=2 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE1_HERA2 Length = 306 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 22/157 (14%) Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 Q + +G V I+ +S + G G V +GD+ GG GHASH+TGLD Sbjct: 172 QDPDGNGNANWGVASTVAQIEAAASDFAGYGKGKVPLGDISFEHGGDI-PGHASHETGLD 230 Query: 119 VDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 VD++ ++ + + Q+ +++ I+ AA ++ F Sbjct: 231 VDLWPIRTDSKQCTGSRITWQSSTYDRAATRNL---------VKAIRAAAPNQITVIYFN 281 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLR 215 +P + + + + H H+H+R + Sbjct: 282 DPVLISEGLTTSYPN------------HDNHLHIRFK 306 >UniRef50_A0YMI6 Carboxypeptidase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YMI6_9CYAN Length = 536 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 30/170 (17%) Query: 49 DTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSN-LGMGTVLIGDMGMPAGGRFN 107 +P E Y+ + + +GH +++ I + S+ + + IG++ + GG Sbjct: 44 QQMPASGEGYECY-GYRDKCYGHSEVIQAIISICSEWAKLYKKPRIGIGNISLTNGGPME 102 Query: 108 GGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLA 167 H+SHQ GLDVDI + + P S ++ LI Sbjct: 103 P-HSSHQHGLDVDI------APIANTEEEIPLTWYDSKY------SRDRTQQLVDLIHNN 149 Query: 168 AQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCP 217 +F +P IK V PW H H+HV P Sbjct: 150 TILGVKVILFNDPDIKG---------------VEPWAGHDNHLHVSFLPP 184 >UniRef50_C4DNK9 Putative peptidoglycan-binding domain-containing protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNK9_9ACTO Length = 323 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 23/161 (14%) Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 Q + + +G V ++ + + G G + +GD+G GG GH SH+ GLD Sbjct: 181 QDPDGNGKADWGTASAVGQLEAGAKTFAESGNGPLPVGDIGFEHGGDI-PGHGSHEVGLD 239 Query: 119 VDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 VD++ ++ A + ++ + + +V I+ AA V +F Sbjct: 240 VDVWPIRGDSKQCEADRITWESAEYDRDATRQLVKD---------IRAAASGHVVFILFN 290 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPAD 219 +P + + + H H+H+R C Sbjct: 291 DPKLIAEGLTSEYAN------------HDNHLHIR-YCEVG 318 >UniRef50_B2IYA7 Putative uncharacterized protein n=2 Tax=Cyanobacteria RepID=B2IYA7_NOSP7 Length = 521 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 47/199 (23%) Query: 37 IGSFSNGCIVGADT-----LPIQSEHY-----QVMRTDQRRYFGHPDLVMFIQRLSSQVS 86 +G ++ + A+ +P + ++ T FG L I++++ Sbjct: 349 VGGITHRWLQAANAPRWELMPKSDPNNGLVNGELEDTQDNHDFGTHWLADVIKKIAQDYQ 408 Query: 87 N------LGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQA 140 I D+ +P GG H H+TG+ DI+L + Sbjct: 409 KSYRNTHPLAAPFAINDVSLPHGGD-TPDHHGHETGMMCDIYLPQKNGNFGGI------- 460 Query: 141 LDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPA--IKQQLCLDAGTDRDWLR 198 S + +++K K V +F N IK+ LC+ Sbjct: 461 --------VWSSSNYDRDAARAILKSITNQKLVRAVFFNDQQLIKEGLCVSLN------- 505 Query: 199 KVRPWFQHRAHMHVRLRCP 217 H H+H + P Sbjct: 506 ------GHDNHIHFEINPP 518 >UniRef50_A4EZ49 Putative uncharacterized protein n=3 Tax=Roseobacter RepID=A4EZ49_9RHOB Length = 251 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 32/177 (18%) Query: 66 RRYFGHPDLVMFIQRLSSQV--SNLGMGTVLIGDMGMP--AGGRFNGGHASHQTGLDVDI 121 R + DL +Q +SQV G T+L+ D P G H SH+ G D+ Sbjct: 80 NRNYVSADLAEVLQEAASQVEAQYPGTQTLLL-DANFPFLDGFPLLP-HLSHKDGRKADL 137 Query: 122 FLQLPKTRWTSAQLLRPQALDLVS-RDGKHVVSTLWKPEIFSL----------------- 163 P + + DG W + L Sbjct: 138 AFYYQDQNGGYLPGHLPSPIGYFAFEDGPTECPDAWPTLRWDLAFLQPYWRDYSLEPERL 197 Query: 164 ---IKLAAQDKDVTRIFVNPAIKQQL-CLDAGTDRDWLRKVRPWFQHRAHMHVRLRC 216 ++ A ++ V +IF+ P ++Q+L DA R R H H+H+++ Sbjct: 198 KLVVQTLAGNERVEKIFLEPHLQQRLGLRDAKLRFQGCRAAR----HDDHLHLQIFP 250 >UniRef50_UPI0001B561AE peptidoglycan binding domain-containing protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B561AE Length = 331 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 27/169 (15%) Query: 59 QVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLD 118 Q ++ +G V ++ ++ G G + +GD+G+ GG GHASH+ GLD Sbjct: 186 QNPDGNKTANWGTAAAVAQLEAAGRAFASAGRGRIPVGDLGLELGGNI-PGHASHEQGLD 244 Query: 119 VDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFV 178 D++ +A + ++ + +V I+ AA T F Sbjct: 245 ADLWPVRDDGAQCTAARITWKSAAYDRAATRRLVQE---------IRRAAPGHVKTVFFN 295 Query: 179 NPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRC----PADSLEC 223 +P + + + W H H+HVR C P+ + C Sbjct: 296 DPQLISEGLTTS------------WAGHDNHLHVR-YCEPAHPSAAYRC 331 >UniRef50_A9DE24 Penicillin-insensitive murein endopeptidase n=1 Tax=Shewanella benthica KT99 RepID=A9DE24_9GAMM Length = 94 Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 9/82 (10%) Query: 196 WLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE-----PPKPGT 250 WL KVRPW+ H+ HMHVRL C C++Q LP SG GC +L W + T Sbjct: 13 WLSKVRPWWGHKIHMHVRLSCAEGDKLCQNQNLPVSGTGC-EDLSWWKQQILQPKKSAQT 71 Query: 251 TKPEKKTPPPL---PPSCQALL 269 +K +K+ P P+ P CQ LL Sbjct: 72 SKDKKREPKPVKVKPELCQLLL 93 >UniRef50_A9GTP3 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GTP3_SORC5 Length = 182 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 65/182 (35%), Gaps = 17/182 (9%) Query: 57 HYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGT-VLIGDMGMPAGGRFNGGHASHQT 115 Y + R + H + ++ + + G ++G+ G GG F H +HQ Sbjct: 2 TYSYLGASLGRQYVHGAVRDALEEAFAACAAARPGRRFVVGETGHRDGGPFWP-HRTHQN 60 Query: 116 GLDVDIFLQLPKTRWTSAQLLR--------PQALDLVSRDGKHVVSTLWKPEIFSLIKLA 167 GL VDIF+ L A++ D R G+ + + S + Sbjct: 61 GLSVDIFVPLRDGAGRPAEVSTYPWNKLGYGLEFDAQGRSGELTIDFDDLARLLSALDEK 120 Query: 168 AQDK--DVTRIFVNPA-IKQQLCLDAGTDRDWLRKVRP----WFQHRAHMHVRLRCPADS 220 A+ + + RI + P + L AG L P W++H H+H+ A Sbjct: 121 ARPRKLRIQRIILAPEYVPLLLASPAGRKLGSLAGAIPRGPVWWRHDEHVHIDFAFAAGR 180 Query: 221 LE 222 Sbjct: 181 PR 182 >UniRef50_A6EMA3 Putative transmembrane protein n=4 Tax=Bacteroidetes RepID=A6EMA3_9BACT Length = 269 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 38/183 (20%) Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMG-TVLIGDMGMP--AGGRFNGGHASHQTGLDVDIF 122 R + P+L + + + G ++ D P G H SH G VDI Sbjct: 92 NRNYVTPELNDVLNKSAKDFQQKYPGIELVYLDASFPFIDGFPLLP-HLSHNDGKKVDIS 150 Query: 123 LQLPKTRWTSAQLLRP-------QALDLVSRDGKHVVS-----TLWKPEIFSL------I 164 L +A + + V + SL + Sbjct: 151 FIYQDNFGNMTNLKPALSGYGVYEAPTVSEYNQPDVCEKKGYWQYDFTKYASLSTINQEL 210 Query: 165 KL-----------AAQDKDVTRIFVNPAIKQQL-CLDAGTDRDWLRKVRPWFQHRAHMHV 212 K+ ++ V+++F+ P +K+++ D + VR H H+H Sbjct: 211 KISEVGTKALSLCILKNPAVSKMFIEPHLKKRMQLYDTKVRFHGCQAVR----HDDHIHF 266 Query: 213 RLR 215 +++ Sbjct: 267 QVK 269 >UniRef50_A9DVV8 Putative transmembrane protein n=1 Tax=Kordia algicida OT-1 RepID=A9DVV8_9FLAO Length = 272 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 40/206 (19%) Query: 45 IVGADTLPIQSEHYQVMRTDQ---RRYFGHPDLVMFIQRLSSQVSNLGMGTV-LIGDMGM 100 + G LPI + + +R R++ DL + ++ + N GT+ D Sbjct: 71 LYGRKPLPITNTALKPLRAYTFLMNRHYVAEDLYDVLLAEATAMQNEFPGTITYYLDGCF 130 Query: 101 PAGGRFNG-GHASHQTGLDVDIFLQLPK-------------------TRWTSAQLLRPQA 140 P G +F H SH G +D+ T+ + P+ Sbjct: 131 PLGKKFPLLPHWSHNDGRKIDLAFYYTDATTKKYRNGSPSWLGYGVCESPTAKEENMPEF 190 Query: 141 LDLVSRDGKHVVST-----------LWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQL-CL 188 + K + I+ + +IF+ P +K ++ Sbjct: 191 CAEKGYFQYSFLEKIVPQYKKGNYVFDKTRTKTFIQKLTASSKIKKIFIEPHLKARMHLR 250 Query: 189 DAGTDRDWLRKVRPWFQHRAHMHVRL 214 + VR H H+HV+L Sbjct: 251 SSKIRFHGCHAVR----HDDHIHVQL 272 >UniRef50_A1ZWN3 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWN3_9SPHI Length = 278 Score = 67.7 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 40/185 (21%) Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMGTV-LIGDMGMP--AGGRFNGGHASHQTGLDVDIF 122 R++ P L+ +Q +S Q+ T+ D P G H SH G +D+ Sbjct: 99 NRHYVRPQLIHILQTVSKQLRKQYPATIIAYMDANFPFKKGYPLWP-HLSHNDGKKIDLA 157 Query: 123 LQLPKTRWTSAQLLRPQA-------------------------------LDLVSRDGKHV 151 ++ L + Sbjct: 158 FLYKDATTQKYLPQTAKSLIGYGGCETPRKGEYNVAKICAQQGFWQYNILRRIYPKWLQK 217 Query: 152 VSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIK-QQLCLDAGTDRDWLRKVRPWFQHRAHM 210 + P +++L A V +++ P +K + A + VR H H+ Sbjct: 218 NIDIDVPRTRKMMQLFAFQPQVQVMYMEPYLKTRWGVNYAKIGFHGCQAVR----HDDHL 273 Query: 211 HVRLR 215 HV + Sbjct: 274 HVSVY 278 >UniRef50_Q26FZ9 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26FZ9_9BACT Length = 273 Score = 66.6 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 49/198 (24%) Query: 57 HYQVMRTDQRRYFGHPDLVMFIQR---LSSQVSNLGMGTVLIGDMGMP--AGGRFNGGHA 111 Y +M R + DL ++ + G+ V + D G P G H Sbjct: 87 GYVLMC----RNYVRYDLYTVLEDVSDIYRDSKYNGLQLVYL-DAGFPFINGFPLLP-HF 140 Query: 112 SHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKH----------VVSTLWK---- 157 SH G VD+ S L P + + + W+ Sbjct: 141 SHNDGRKVDVAFVYKDGARASDYNLNPSLIGYGVYENPRENEFNQTQACEDAGYWQYGCA 200 Query: 158 ---------------PEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVR- 201 L++ V ++F+ P + +L ++ K+R Sbjct: 201 TALGFNVDKDVSLNEQLTKQLVEQIQSHPKVQKVFIEPHLISRL-----GIKNVKSKLRF 255 Query: 202 ---PWFQHRAHMHVRLRC 216 +H H+H ++ Sbjct: 256 HGCHAVRHDDHIHFQVNP 273 >UniRef50_Q1MF00 Putative transmembrane protein n=8 Tax=Rhizobium RepID=Q1MF00_RHIL3 Length = 311 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 71/246 (28%), Gaps = 55/246 (22%) Query: 6 IALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGAD-TLPIQSEHYQVMRTD 64 A+ L + A+ A+ I G C+ A L ++S Y ++ Sbjct: 85 FAIFLLCYAGATFTASLAAPI----------FGRVPLSCVADAADRLVVRSPIYCLL--- 131 Query: 65 QRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIG-DMGMP--AGGRFNGGHASHQTGLDVDI 121 R + PD+ + L++ + GTV + D P G H SH G +D Sbjct: 132 -NRNYVTPDVRDLAKALAAHIDKEFPGTVTVALDANFPFLNGFPLLP-HLSHADGKKLDF 189 Query: 122 FLQLPKTRWTSAQLLRPQALDLVSRDGKHVVS-------TLWKPEIF--SLIKLA----- 167 + + + W + ++ Sbjct: 190 AYYYKDADGAFLNGATRSPIGYFAFEQPAPGDELPCEGRNDWLTTRWNFDALQPLFPAYR 249 Query: 168 ------------AQDKDVTR-----IFVNPAIKQQL-CLDAGTDRDWLRKVRPWFQHRAH 209 + V R IF+ P +K L D+ R R H H Sbjct: 250 IEEQRTSAAIGWLTSEGVARFGLQKIFIEPHLKNALGITDSHVRFQGCRAAR----HDDH 305 Query: 210 MHVRLR 215 +H+++ Sbjct: 306 IHIQVE 311 >UniRef50_A6GGI0 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGI0_9DELT Length = 423 Score = 49.2 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 5/107 (4%) Query: 66 RRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQL 125 + +G ++ + ++ + S G + IGD+ GG+ H +HQ G+D D++L Sbjct: 225 HKQWGKEAVIRDLVGVAHEYSARTGGLLGIGDISHVDGGKIE-DHWTHQKGVDADLYLL- 282 Query: 126 PKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKD 172 W + ++ +W + A+ Sbjct: 283 ---DWETPSTEPEPEPASEAQPAPDPRPIIWWHHYKRGVSTWARKPK 326 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.140 0.446 Lambda K H 0.267 0.0428 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,819,944,874 Number of Sequences: 3077464 Number of extensions: 82573419 Number of successful extensions: 658760 Number of sequences better than 1.0e-01: 133 Number of HSP's better than 0.1 without gapping: 139 Number of HSP's successfully gapped in prelim test: 109 Number of HSP's that attempted gapping in prelim test: 653746 Number of HSP's gapped (non-prelim): 3124 length of query: 274 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 147 effective length of database: 649,558,428 effective search space: 95485088916 effective search space used: 95485088916 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (40.0 bits)