Phyre 2 alignment of P0A6E1 with c2wjyA_

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Job Description | P0A6E1
Confidence | 96.69% | Date | Thu Jan 5 11:02:55 GMT 2012
Rank | 361 | Aligned Residues | 25
% Identity | 28% | Template | c2wjyA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:regulator of nonsense transcripts 1; | PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | T | Q | P | L | F | L | I | G | P | R | G | C | G | K | T | T | V | G | M | A | L | A | D | S | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | P | L | S | L | I | Q | G | P | P | G | T | G | K | T | V | T | S | A | T | I | V | Y | H | L
Template Known Secondary structure |  | S | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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