16/01/2012 03:04:19 : INFO  : Run start: Mon Jan 16 03:04:17 GMT 2012
16/01/2012 03:04:28 : INFO  : Initialised job
16/01/2012 03:04:31 : INFO  : Renaming log file 'phyre2_20120116_030416.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/2df6746add5b5226/phyre_20120116_030416.log'
16/01/2012 03:04:33 : INFO  : Initialised job:
Sequence
>batch____
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRAR
ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR
PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC

16/01/2012 03:04:35 : INFO  : Checked sequence
16/01/2012 03:04:41 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 03:04:42 : INFO  : PSI-BLAST 3 iterations
16/01/2012 03:06:39 : INFO  : PSI-BLAST 5 iterations
16/01/2012 03:09:06 : INFO  : Finished PSI-BLAST
16/01/2012 03:09:10 : INFO  : Running Buildali to generate a3m file
16/01/2012 03:27:49 : INFO  : Converting to HMM
16/01/2012 03:27:55 : INFO  : Calibrating HMM
16/01/2012 03:28:14 : INFO  : Searching HMM database
16/01/2012 03:32:39 : INFO  : Finished buildali
16/01/2012 03:32:43 : INFO  : Predicting secondary structure
16/01/2012 03:32:59 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 03:33:03 : INFO  : Predicting Disordered regions
16/01/2012 03:33:12 : INFO  : Predicted Disorder (Disopred)
16/01/2012 03:33:15 : INFO  : Running memsat_svm check
16/01/2012 03:38:52 : INFO  : Globular protein
16/01/2012 03:38:54 : INFO  : Predicted Transmembrane (memsat_svm) ID '2df6746add5b5226'
16/01/2012 03:38:58 : INFO  : Initialising fold library search
16/01/2012 03:39:05 : INFO  : Initialised search input
16/01/2012 03:39:10 : INFO  : Building Ensemble models
16/01/2012 03:39:17 : INFO  : Building hh.d1e6ca_.model.1.pdb
16/01/2012 03:39:48 : INFO  : Building d1e6ca_.1.pdb
16/01/2012 03:40:18 : INFO  : Building c1zuiA_.2.pdb
16/01/2012 03:40:47 : INFO  : Building c3trfB_.3.pdb
16/01/2012 03:41:15 : INFO  : Building c2pt5D_.4.pdb
16/01/2012 03:41:44 : INFO  : Building d2iyva1.5.pdb
16/01/2012 03:42:14 : INFO  : Building d1viaa_.6.pdb
16/01/2012 03:42:43 : INFO  : Building d1kaga_.7.pdb
16/01/2012 03:43:11 : INFO  : Building c3t61A_.8.pdb
16/01/2012 03:43:38 : INFO  : Building d1q3ta_.9.pdb
16/01/2012 03:44:07 : INFO  : Building c3nwjB_.10.pdb
16/01/2012 03:44:36 : INFO  : Building d1rkba_.11.pdb
16/01/2012 03:45:05 : INFO  : Building c3cm0A_.12.pdb
16/01/2012 03:45:33 : INFO  : Building d1knqa_.13.pdb
16/01/2012 03:46:01 : INFO  : Building c2bwjC_.14.pdb
16/01/2012 03:46:32 : INFO  : Building c2rhmD_.15.pdb
16/01/2012 03:47:00 : INFO  : Building c3akcA_.16.pdb
16/01/2012 03:47:27 : INFO  : Building d1ak2a1.17.pdb
16/01/2012 03:47:57 : INFO  : Building d3adka_.18.pdb
16/01/2012 03:48:23 : INFO  : Building d1ckea_.19.pdb
16/01/2012 03:48:49 : INFO  : Building c2ar7A_.20.pdb
16/01/2012 03:49:46 : INFO  : Finished HH model building
16/01/2012 03:49:50 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 03:50:54 : INFO  : html domain output complete ID '2df6746add5b5226'
16/01/2012 04:27:10 : INFO  : Run end  : Mon Jan 16 04:27:08 GMT 2012
