Phyre 2 alignment of P28249 with c1cqtJ_

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Job Description | P28249
Confidence | 1.97% | Date | Thu Jan 5 11:44:34 GMT 2012
Rank | 36 | Aligned Residues | 12
% Identity | 42% | Template | c1cqtJ_
PDB info | PDB header:gene regulation/dna | Chain: J: PDB Molecule:pou domain, class 2, associating factor 1; | PDBTitle: crystal structure of a ternary complex containing an oca-b2 peptide, the oct-1 pou domain, and an octamer element
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 605 | . | . | . | . | 610 | . | . | . | . | . | .
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Template Sequence |  | R | V | K | E | P | V | K | E | L | L | R | R
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|  | 807 | . | . | 810 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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