Phyre 2 alignment of P28249 with c3htkA_

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Job Description | P28249
Confidence | 2.01% | Date | Thu Jan 5 11:44:34 GMT 2012
Rank | 34 | Aligned Residues | 27
% Identity | 22% | Template | c3htkA_
PDB info | PDB header:recombination/replication/ligase | Chain: A: PDB Molecule:structural maintenance of chromosomes protein 5; | PDBTitle: crystal structure of mms21 and smc5 complex
Resolution | 2.31 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 591 | . | . | . | . | . | . | . | . | 600 | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 610 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | R | R | L | N | D | W | A | E | R | N | K | D | . | . | . | . | . | . | . | . | . | S | R | N | G | K | D | V | K | K | L | L | E | K | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | K | T | L | E | N | Q | V | E | E | L | T | E | K | C | S | L | K | T | D | E | F | L | K | A | K | E | K | I | N | E | I | F | E | K | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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