Phyre 2 alignment of P28249 with c2qtsA_

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Job Description | P28249
Confidence | 16.69% | Date | Thu Jan 5 11:44:34 GMT 2012
Rank | 1 | Aligned Residues | 25
% Identity | 12% | Template | c2qtsA_
PDB info | PDB header:membrane protein | Chain: A: PDB Molecule:acid-sensing ion channel; | PDBTitle: structure of an acid-sensing ion channel 1 at 1.9 a resolution and low2 ph
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | M | R | R | F | L | T | T | L | M | I | L | L | V | V | L | V | A | G | L | S | A | L | V | L | L
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Template Sequence |  | L | K | R | V | V | W | A | L | C | F | M | G | S | L | A | L | L | A | L | V | C | T | N | R | I
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Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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