BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (278 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Ba... 312 8e-84 UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmi... 261 1e-68 UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Fi... 252 1e-65 UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus ... 238 2e-61 UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes... 233 6e-60 UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB 228 1e-58 UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Ent... 228 2e-58 UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostri... 227 3e-58 UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Ent... 225 1e-57 UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostr... 225 1e-57 UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostri... 224 3e-57 UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 223 4e-57 UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostri... 223 7e-57 UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exi... 221 3e-56 UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 T... 219 6e-56 UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminoc... 215 1e-54 UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaeros... 214 2e-54 UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes ... 214 2e-54 UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 ... 214 3e-54 UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-bind... 211 2e-53 UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Act... 211 2e-53 UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillu... 210 4e-53 UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Cl... 209 1e-52 UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria... 208 2e-52 UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerot... 208 2e-52 UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clo... 205 2e-51 UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridial... 204 3e-51 UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Ent... 203 4e-51 UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Seb... 202 1e-50 UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dic... 201 2e-50 UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria... 201 2e-50 UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdema... 201 2e-50 UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacte... 199 6e-50 UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacill... 196 5e-49 UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enteroco... 196 6e-49 UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Strepto... 194 3e-48 UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Strept... 193 5e-48 UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clo... 189 1e-46 UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostr... 188 2e-46 UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lac... 186 1e-45 UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 T... 184 3e-45 UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=... 182 7e-45 UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator... 182 1e-44 UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Ba... 181 2e-44 UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus Rep... 181 2e-44 UniRef50_P15401 Levansucrase and sucrase synthesis operon antite... 180 4e-44 UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 180 6e-44 UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Ta... 180 6e-44 UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collins... 178 2e-43 UniRef50_A3CN37 Transcriptional antiterminator, BglG family, put... 178 2e-43 UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 T... 178 2e-43 UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Cl... 177 3e-43 UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bac... 176 6e-43 UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdol... 176 7e-43 UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leu... 176 8e-43 UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium... 176 1e-42 UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridi... 175 1e-42 UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Art... 175 1e-42 UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcu... 175 1e-42 UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridial... 174 2e-42 UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-bind... 174 2e-42 UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium... 173 6e-42 UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pedioc... 173 7e-42 UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG fa... 170 5e-41 UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Ent... 169 8e-41 UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Str... 168 2e-40 UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Ba... 168 2e-40 UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterm... 168 2e-40 UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7V... 168 2e-40 UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nak... 168 2e-40 UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Ent... 167 5e-40 UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus... 166 9e-40 UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria Re... 166 1e-39 UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria m... 165 2e-39 UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=The... 164 4e-39 UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecali... 164 4e-39 UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ7... 163 5e-39 UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=La... 162 9e-39 UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostr... 162 1e-38 UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 T... 160 4e-38 UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostri... 159 8e-38 UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaeros... 159 1e-37 UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collins... 158 2e-37 UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacte... 157 3e-37 UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-bind... 157 3e-37 UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clo... 157 3e-37 UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1... 156 8e-37 UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lac... 156 8e-37 UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 T... 155 1e-36 UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Ac... 155 1e-36 UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12... 155 1e-36 UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococ... 155 1e-36 UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidob... 155 2e-36 UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mu... 155 2e-36 UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Seb... 155 2e-36 UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9... 154 3e-36 UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12... 154 3e-36 UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillacea... 154 3e-36 UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macroco... 154 3e-36 UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium... 153 5e-36 UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysip... 153 8e-36 UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax... 152 1e-35 UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collins... 151 3e-35 UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdema... 150 3e-35 UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 T... 150 4e-35 UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collins... 149 8e-35 UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridi... 149 2e-34 UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exi... 146 6e-34 UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Ta... 146 9e-34 UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-bind... 145 2e-33 UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecali... 145 2e-33 UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacill... 145 2e-33 UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 ... 144 3e-33 UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Pae... 143 7e-33 UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=... 142 9e-33 UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clo... 142 1e-32 UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacill... 142 1e-32 UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lacto... 140 4e-32 UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Ent... 140 5e-32 UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=The... 139 9e-32 UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 ... 139 1e-31 UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exi... 139 1e-31 UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 T... 139 1e-31 UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminoc... 138 2e-31 UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobac... 138 2e-31 UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostri... 137 3e-31 UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Ent... 137 3e-31 UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 T... 137 3e-31 UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria ... 137 4e-31 UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdema... 137 5e-31 UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacte... 136 6e-31 UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria gr... 136 7e-31 UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostri... 136 8e-31 UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax... 136 1e-30 UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdema... 135 1e-30 UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bac... 135 1e-30 UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiter... 135 2e-30 UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacill... 135 2e-30 UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Ent... 135 2e-30 UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax... 134 2e-30 UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostri... 134 3e-30 UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdema... 134 5e-30 UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Cor... 134 5e-30 UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Coryneb... 134 5e-30 UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Sub... 132 9e-30 UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicu... 132 9e-30 UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6... 132 2e-29 UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 ... 131 2e-29 UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clo... 131 3e-29 UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collins... 130 3e-29 UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdema... 130 4e-29 UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax... 130 4e-29 UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacill... 130 5e-29 UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdema... 129 8e-29 UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminoc... 129 8e-29 UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 T... 129 1e-28 UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillale... 129 1e-28 UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillacea... 128 2e-28 UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 T... 128 3e-28 UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Bla... 127 4e-28 UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_... 127 6e-28 UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphyloc... 125 2e-27 UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 T... 124 3e-27 UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Seb... 124 4e-27 UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator... 123 6e-27 UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostri... 123 7e-27 UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium ... 121 2e-26 UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacte... 120 6e-26 UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostri... 118 2e-25 UniRef50_D0Z7Y6 Transcriptional antiterminator n=1 Tax=Edwardsie... 118 2e-25 UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacter... 117 4e-25 UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Cor... 115 1e-24 UniRef50_C4VQU1 Cryptic beta-glucoside bgl operon antiterminator... 115 2e-24 UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriace... 114 3e-24 UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus Rep... 114 3e-24 UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collins... 114 5e-24 UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acn... 113 7e-24 UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collins... 112 2e-23 UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdema... 112 2e-23 UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 ... 111 2e-23 UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collins... 111 3e-23 UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alk... 110 4e-23 UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactob... 110 6e-23 UniRef50_A0FL05 Putative transcriptional antiterminator (Fragmen... 108 3e-22 UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobaci... 107 6e-22 UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Strep... 105 1e-21 UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysi... 104 4e-21 UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Strepto... 103 5e-21 UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacte... 103 9e-21 UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Strep... 101 3e-20 UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lac... 100 5e-20 UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=... 97 6e-19 UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bac... 94 3e-18 UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) ... 94 6e-18 UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Cl... 91 5e-17 UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=... 89 2e-16 UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonel... 87 7e-16 UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebac... 87 9e-16 UniRef50_Q5WDQ4 BglG family transcriptional antiterminator n=1 T... 83 1e-14 UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bif... 80 6e-14 UniRef50_UPI000058969E transcription antiterminator n=1 Tax=Stap... 77 5e-13 UniRef50_C6PDR4 PTS system transcriptional activator n=1 Tax=The... 73 1e-11 UniRef50_C0D971 Putative uncharacterized protein (Fragment) n=1 ... 70 8e-11 UniRef50_Q44651 Beta-glucanase (bglA) (Fragment) n=1 Tax=Bacillu... 69 1e-10 UniRef50_A8R873 Putative uncharacterized protein n=1 Tax=Eubacte... 69 2e-10 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 66 1e-09 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 65 3e-09 UniRef50_C4VQU0 Transcription antiterminator LicT n=1 Tax=Lactob... 63 1e-08 UniRef50_C2EJ35 Putative uncharacterized protein n=1 Tax=Lactoba... 62 2e-08 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 62 3e-08 UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=The... 61 4e-08 UniRef50_A4W1H2 Transcriptional antiterminator n=1 Tax=Streptoco... 61 5e-08 UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Cl... 61 5e-08 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 57 6e-07 UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing p... 57 6e-07 UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaeros... 57 7e-07 UniRef50_B7GN85 Transcriptional antiterminator, BglG n=1 Tax=Bif... 57 8e-07 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 57 1e-06 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 56 1e-06 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 55 2e-06 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 55 2e-06 UniRef50_A0AJH4 Complete genome n=52 Tax=Bacilli RepID=A0AJH4_LISW6 55 2e-06 UniRef50_UPI000058969F beta-glucoside operon antiterminator n=1 ... 55 2e-06 UniRef50_B1CAJ2 Putative uncharacterized protein n=1 Tax=Anaerof... 55 3e-06 UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerot... 55 3e-06 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 55 4e-06 UniRef50_B0NYR0 Putative uncharacterized protein n=2 Tax=Clostri... 55 4e-06 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 54 4e-06 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 54 5e-06 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 54 5e-06 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 54 5e-06 UniRef50_A6LWC3 Sigma-54 factor, interaction domain-containing p... 54 7e-06 UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR fa... 53 9e-06 UniRef50_B0MED2 Putative uncharacterized protein n=1 Tax=Anaeros... 53 1e-05 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 53 1e-05 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 52 1e-05 UniRef50_A7GUY2 Sigma-54 factor interaction domain-containing pr... 52 2e-05 UniRef50_A9VR47 PTS system transcriptional activator n=75 Tax=Ba... 52 2e-05 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 52 2e-05 UniRef50_Q185K2 Putative sigma-54 interacting transcription anti... 52 2e-05 UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clo... 52 3e-05 UniRef50_A6QKC9 Transcriptional antiterminator BglG family prote... 52 3e-05 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 51 3e-05 UniRef50_A4IML7 Regulatory protein n=10 Tax=Firmicutes RepID=A4I... 51 3e-05 UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 51 4e-05 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 51 4e-05 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 51 4e-05 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 51 5e-05 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 51 6e-05 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 50 6e-05 >UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Bacteria RepID=ARBG_ERWCH Length = 283 Score = 312 bits (799), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/276 (53%), Positives = 207/276 (75%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV V+D+Q E+VVMGRG+GF+KR G+ +N++ IEK ++L S EL RLS Sbjct: 1 MKIAKILNNNVVTVMDEQNNEQVVMGRGLGFKKRPGDTVNAALIEKIFSLRSSELTARLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L IPLEV+ T DRII+LA+E+LG LQ+S+YISLTDHC FAI+R +Q V + N L W Sbjct: 61 DVLERIPLEVVTTADRIIALAKEKLGGNLQNSLYISLTDHCHFAIERHRQGVDIRNGLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++RLY KEF +G +AL II +RLGV+LP+DE GFIA+HLV+AQ+ +M +V +T++M+ Sbjct: 121 EVKRLYQKEFAIGLDALDIIHRRLGVRLPEDEAGFIALHLVNAQLDSHMPEVMRITRVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+Q +L+Y E++ SY R VTHLKF + R+L + DESL VK+ Y A+ Sbjct: 181 EILNIVKYQLNLDYNEQAFSYHRFVTHLKFFAQRLLGRTPVFSEDESLHDVVKEKYTLAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 CAE+I I L Y ++ E+MFLAI+IERVR E Sbjct: 241 HCAEKIQDHIMLHYDYTLTKEELMFLAIHIERVRSE 276 >UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmicutes RepID=LICT_BACSU Length = 277 Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 193/276 (69%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNNV+ V+++Q +E VVMGRG+ FQK++G+ ++ + IEK + L + +++ + Sbjct: 1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTLDNKDVSEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP+E M + IIS A+ +LGK L DSIY+SLTDH FAI+R Q+ + + N LLW Sbjct: 61 TLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +RLY EF +G+EAL ++ + GV LP+DE GFIA+H+V+A+++ M ++ +T++M+ Sbjct: 121 ETKRLYKDEFAIGKEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+ F + + EESL Y R VTHLKF + R+ + D+ L VK+ Y +A+ Sbjct: 181 EILSIVKYHFKIEFNEESLHYYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +C ++I +I +Y+ K++ E+++L I+IERV K+ Sbjct: 241 ECTKKIQTYIEREYEHKLTSDELLYLTIHIERVVKQ 276 >UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Firmicutes RepID=A6LXA2_CLOB8 Length = 279 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/277 (43%), Positives = 187/277 (67%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN+V D+ +E +VMG G+GF+K+ GE I+ +EK Y+L + +L Sbjct: 1 MKIEKVINNNLVQSFDNNNKEVLVMGCGLGFKKKPGEIIDKDKVEKIYSLEDKNYSNKLI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPLEV+ T + I+S A+ LGK L D+IYI LTDH FA++R + + N LLW Sbjct: 61 ELLSDIPLEVIQTTNEIVSYARYSLGKKLNDNIYILLTDHISFAMERVNKGLQFKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+R Y EF +G+EAL II+KRL V LP+DE IA+H+V+AQ+ S N++D +T ++ Sbjct: 121 EIKRFYNHEFLIGKEALQIIEKRLHVDLPEDEAANIALHIVNAQLNSSNIDDTMSMTNMI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +L ++KF + L E SL Y+R +THLKF S RI I D D SL + +++ Y +A Sbjct: 181 QNILNIVKFHYKLELDEYSLHYERFITHLKFFSQRIFRGNEIEDEDTSLSKIMREKYKEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++CAE+I ++ ++ +++ E+M+LA++I RV K+ Sbjct: 241 YKCAEKIKKYVKSEFNSELTDEEMMYLAVHINRVTKQ 277 >UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus RepID=A8F9J0_BACP2 Length = 278 Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 104/275 (37%), Positives = 188/275 (68%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+LNNNV+ VID+Q +E VVMGRGI FQ+R G+ ++ S I+K + L H ++ R+ Sbjct: 1 MQIQKVLNNNVISVIDEQGKEIVVMGRGIAFQRRPGDPVDESLIDKVFRLEDHSVHERMK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL +P +V+ + +I A +L + L +S+++SL DH +AI+R ++N L+ N L+W Sbjct: 61 MLLLEVPYDVVKVTEEMIQYAHTKLNRRLNESLHVSLADHIHYAIERLKKNHLIENSLIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+RLY EF + ++ L +I++RL ++LP+DE GFIAMH+++A+++ +M +T+ + Sbjct: 121 EIKRLYKDEFLVAKDCLEMIEERLHIELPEDEAGFIAMHIINAELNEDMNTTVNITKEVN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L ++K+ ++ + E+SL++ R +THL+F R++ + D+ L Q +K YP+A+ Sbjct: 181 AILTIVKYHLNMEFDEDSLNFYRFLTHLRFFVQRLINETILVSEDQDLYQLIKVKYPKAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +CA++IA ++ Y R ++ E+++L+I++ R+ K Sbjct: 241 ECAKKIAEYVYQTYHRDLTSEEMLYLSIHLNRLIK 275 >UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes RepID=C9XQT4_CLODC Length = 287 Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/277 (40%), Positives = 185/277 (66%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNNVV+ +DD E +VMG+GIG+QK G I+ + + K + +S+ E++ +L Sbjct: 8 MIINKILNNNVVITLDDNDEEVIVMGKGIGYQKSKGNLIDKTKVNKVFRISNKEISNKLQ 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL++IP+E M II AQ +L K L +SIYISL+DH AI+R ++ + + N +LW Sbjct: 68 ELLNNIPIEHMKLSSEIIEYAQIKLNKKLNESIYISLSDHTYSAIQRMKEGINVKNAILW 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +EF++G +AL II+ + G++LP+DE GFIA H+V+AQ+S + +T+L++ Sbjct: 128 EIKRFYKEEFEIGMKALDIIENKTGIKLPEDEAGFIAFHIVNAQLSEGHTLASDITKLIQ 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWR-ILEHASINDSDESLQQAVKQNYPQA 240 E+L ++++ F + + EES+ Y R + HLKF + R +L+ A ++D+ L +K Y + Sbjct: 188 EVLSIVRYHFRIEFHEESVFYYRFIMHLKFFAQRLLLDSAHEGETDKELLSIIKSKYNKE 247 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +I FI QY ++ E+++L I++ +V K+ Sbjct: 248 FECVVKIKNFIKKQYNYILTDDELIYLTIHLAKVVKD 284 >UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB Length = 282 Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/275 (38%), Positives = 181/275 (65%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I KILNN+ V IDD R EKV+MG+GI FQK+ G+ +N IEK +++ + N + Sbjct: 1 MVIKKILNNSAVTTIDDATRIEKVIMGKGIAFQKKPGDILNEEKIEKIFSIENQNENLKF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+S IP+E + + IIS A+ +L K + IYISLTDH FA +R+ + + + N +L Sbjct: 61 QSLISEIPIEHIKVSENIISYAKRKLDVKFDEHIYISLTDHLSFAFRRYSKGIKIKNNML 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R+Y KE+ +G A+ I LG+++ +DE GFIA+H++ A ++ +M++ +T+++ Sbjct: 121 WDIKRIYKKEYNIGMWAVEYIKGELGIKMDEDEAGFIALHIIDASLNESMDNTINITEII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA-SINDSDESLQQAVKQNYPQ 239 +L +IK+ FS+ + E+ +SY RL+THLK+ + R++ +I++ ++S + VK NY + Sbjct: 181 DGILNIIKYFFSIEFNEDDMSYDRLLTHLKYFAQRVVSRKNAIDEEEKSFLEIVKTNYKE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++C +I FI Y ++ EI++L ++++RV Sbjct: 241 AYRCVGKIKSFIEKNYDYEVKGGEIVYLTLHVQRV 275 >UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Enterobacteriaceae RepID=A1JND6_YERE8 Length = 277 Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 110/274 (40%), Positives = 177/274 (64%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LNNNVVV D +E VV+G+G+GF K+ + ++ +GI+K + L + + Sbjct: 1 MRIQRVLNNNVVVAHDFSGKECVVIGKGVGFNKKPNDLVDEAGIQKIFRLDAENSFDKTH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + +P E+ I+ A +L K+ S+Y SL DH FAI+R +Q V + N LLW Sbjct: 61 DAFQDLPEELFDIVLDIVKQATTKLDRKIHKSVYASLLDHISFAIERAKQGVHVRNMLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+RLY EF +G AL I ++L V L +DE GFIA+HL+++Q G M D+ V+++++ Sbjct: 121 DIKRLYRNEFIIGISALENIKQKLNVDLAEDEAGFIALHLLNSQKDGTMPDIENVSKVIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ F++ Y+EES+++QR VTHLKF S R+L + + +D SL V + Y ++ Sbjct: 181 DLLNIVKYHFNIEYEEESINFQRFVTHLKFFSHRLLSNTYVMTNDNSLHDVVAEKYSTSY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +C ++I FI Y R+++ E+MFLAI+IE VR Sbjct: 241 ECTKKINKFIKHDYGRELTSDEMMFLAIHIEHVR 274 >UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0MGF2_9FIRM Length = 291 Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 104/274 (37%), Positives = 182/274 (66%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK++NNNVV D+ E ++MG G+GF+ + G+ ++ S I+K + L ++ R Sbjct: 8 MKITKVINNNVVSSTDEAGNEVILMGTGLGFKGKEGKVVDESKIQKIFHLEDAGVSQRFK 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL++ +P+E++ TC II A+ L KL ++IYI+LTDH FA++R +Q+++ PNPL Sbjct: 68 ELITDLPMELLNTCSNIIMYAKGILDTKLNENIYITLTDHINFALQRMEQDMMYPNPLSR 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y E+++GE AL I++K LGV+LPKDE IA+H+VSA+ + D +T ++ Sbjct: 128 EVKTFYDLEYKIGEYALGIVEKDLGVRLPKDEAVSIALHVVSAEYDTKVRDTVQITTFIK 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +K F + E SL+Y+R +THLKFLS +++ +++ + L++ + YP + Sbjct: 188 NVIDKVKDYFQMELTETSLNYERFITHLKFLSRKVMSGGGMDEIEPELRKMISAMYPDEY 247 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 QC+ IA +I +Y+R++S EI++L ++IER++ Sbjct: 248 QCSREIAEYIKKEYRREMSEGEIVYLTMHIERIK 281 >UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Enterobacteriaceae RepID=C6DCM5_PECCP Length = 278 Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 181/274 (66%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KIL+NN V+V+ D +RE V +G+G+GF K+ G+ I+ IE ++ S + LS Sbjct: 1 MIIKKILSNNAVLVLADDRREIVAIGKGVGFGKKVGDPIDQQRIESQFVKKSDGMADVLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP + +A +II+LAQ+ L +QD+++++L+DH FAI+R ++ + N +LW Sbjct: 61 QLLADIPPDCLAVTQQIITLAQKTLRLNVQDTLFLALSDHINFAIQRHKKGQTIKNLMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++ Y EF +G EAL +I RLG+ LP+DE GFIA+HL +A + +M+ +++ Sbjct: 121 DIRQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLANATNNSDMQSTMQSAGIIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ + + E SL+YQRLVTHLKF + R+L +++ D+S+ Q + + P+A+ Sbjct: 181 DILTILKYDLHITFDEHSLNYQRLVTHLKFFALRLLNRETVSHGDDSIYQGITEMMPRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 CA ++ ++ Y +++ EIMFL I+I R++ Sbjct: 241 ACAMKVYDYVEKNYGCQLTTDEIMFLTIHINRLQ 274 >UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostridiales RepID=C7GD80_9FIRM Length = 277 Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 178/273 (65%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D Q+E V+MG+GIGF+ GE I+ S IEK + + + L+ + Sbjct: 1 MVIQKVINNNVISAYDVNQQEIVIMGKGIGFKAHTGELIDESKIEKVFRIENENLSRQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL +IPLE M IIS A + L +L +IYI+LTDH FAI+R Q + L N LLW Sbjct: 61 ELLENIPLEHMQLTSDIISYAIKNLNVQLNQNIYITLTDHINFAIQRQSQGIQLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++ Y +E+ +G+ A+ +++++LG + +DE GFIA+H V+A+ + + D +T +++ Sbjct: 121 ETKKFYHQEYLMGKYAVDLLNEKLGTEFTEDEAGFIALHFVNAEYNTTINDTFEMTNMIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L+L++ + + + EESL Y+R +THLKFL R+ H + D + + ++ YP+ + Sbjct: 181 KILELVRLEMGIEFDEESLHYERFITHLKFLVQRLYRHELLKDEEIEFARMMENKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C++ IA +I +Y I+ EIMFLAI+I+RV Sbjct: 241 ECSKHIAEYIEKEYGSGIASEEIMFLAIHIKRV 273 >UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B6FYA9_9CLOT Length = 293 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 103/275 (37%), Positives = 176/275 (64%), Gaps = 1/275 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M++TK++NNN V +++ +E +VMG+GIGF+ + G+ I+ S +EK + ++ + Sbjct: 12 MFMKVTKVINNNFVCSCNEKNKEIIVMGKGIGFKAKEGDEIDKSKVEKVFTMNGKSAIDK 71 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ +P+E + II+ A+ LGK L +IYI+LTDH F++ RF+ + NPL Sbjct: 72 FKRLIEELPIEHFKVSNDIINYAKRTLGKRLNQNIYITLTDHINFSVYRFKNGMKFSNPL 131 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 LW+++ Y E+ +GE A+ +I ++LGV++ +DE IA+H+V+A+ + M D +T L Sbjct: 132 LWEVKHFYNPEYIIGEYAVNLIKEKLGVEMGEDEAANIALHIVNAEYNTEMNDALKITTL 191 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L+++ F + EESL Y RL+THLKFLS RI + DSD+ + + YP+ Sbjct: 192 IGDILKIVTDTFDIQLDEESLHYSRLITHLKFLSQRIFMGEMLKDSDDVFAEMIATKYPE 251 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA +I +I QY ++IS E+++LA++I RV Sbjct: 252 EFKCALKIRDYIEEQYNQRISNEELVYLAVHIRRV 286 >UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 Length = 285 Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 177/274 (64%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNNVV+ +E VVMGRG+ FQK+ G+ + IEK + + +HEL+ +LS Sbjct: 1 MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKLGDEVEVPKIEKTFVMETHELSEKLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPL+ + D ++ AQE L L D+IY++LTDH FA+ R+ Q + L N LLW Sbjct: 61 ELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHINFAVSRYNQGINLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I+R Y E+ +G +AL I++ +G++L +DE GFIA+H+V+A+ G M +TQ++ Sbjct: 121 EIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHIVNARQDGQQMHMTVAMTQIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L ++ + + + E SL+Y R +THL++ + R+L ++ D+ L + V+ YP+A Sbjct: 181 QDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLRKEIVDSGDDFLYEQVQIKYPEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C ++I ++ + +++ E ++L I+I RV Sbjct: 241 FNCTKKIDAYLLNTHHTELTRDERVYLTIHIYRV 274 >UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY82_9CLOT Length = 280 Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 108/274 (39%), Positives = 174/274 (63%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K LNNNV VV D E +VMG+GI + K+AG+ ++ +EK++ S+ + + + Sbjct: 1 MKIKKKLNNNVAVVTDKTGNEIIVMGKGITYDKKAGDCVDVEQVEKQFVPSNKDFSMKFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L IP + + + II A++ L ++ D+IYISLTDH A+KR+ + +PNPLL Sbjct: 61 EILLDIPSKYLEVSNCIIERAKKYLDAEIDDNIYISLTDHIHMAVKRYLDGMQVPNPLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R Y KE+++G +AL II +L V+LP+DE GFIA H V+AQ + + + +L++ Sbjct: 121 DIKRFYNKEYEIGCQALEIIKDQLKVELPEDEAGFIAFHFVNAQQNLESSKMVDIMKLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI-LEHASINDSDESLQQAVKQNYPQA 240 E+ ++K+Q L++ EES+ Y R +THLKF + R+ LE+ D D L VK+ Y +A Sbjct: 181 EITNIVKYQMGLDFDEESVYYYRFITHLKFFAQRLFLENKQYTDEDNPLYHIVKEQYKKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C + + F+ +Y KIS E ++L ++IE + Sbjct: 241 FNCTQSVVKFVDNKYNYKISKEEQLYLTVHIENI 274 >UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0E0_EXISA Length = 283 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 114/281 (40%), Positives = 177/281 (62%), Gaps = 7/281 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+K+ NNNVV ID +E+VVMGRGI FQKR G+ I+ + IEK + L S E R Sbjct: 1 MHISKVFNNNVVA-IDANGQEQVVMGRGIAFQKRPGDPIDQTRIEKIFTLESKESYERFV 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + M T +I+ LA+ RL + + DS+Y++L DH FA+ R+Q + + NPL+W Sbjct: 60 HFLNEMPTDEMETVKQIVRLAEGRLTQPIHDSLYVTLADHLHFALSRYQDGIQIRNPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG----NMEDVAGVT 177 +++R Y EF +G+EA+ +I++R V+L +DE IA+HLV+A MSG N+ V +T Sbjct: 120 EVKRFYAPEFAIGKEAVKLINERHEVKLDEDEAVAIALHLVNATMSGVKGENLHLVTEMT 179 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQN 236 + + +L +I + F + EES +Y R +THLK+ R+ + + DE+L VKQ Sbjct: 180 RATQAILTIITYHFQIELDEESYAYARFLTHLKYFVQRLASGEKVKSTGDETLFLMVKQR 239 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+A++C E+IA I +Y +S E +++ I+IE + KE Sbjct: 240 YPEAFECVEKIAGLIATKYHYDVSMDERLYMMIHIENLMKE 280 >UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 Tax=Listeria RepID=Q71VY8_LISMF Length = 281 Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 100/275 (36%), Positives = 182/275 (66%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I +ILNNN+V ID+ +E +++G+G+GF + G+ IN S IEK + L ++ + Sbjct: 4 LRIERILNNNIVSAIDEDAQELLILGKGLGFNSKVGDPINESKIEKVFELKDDTMD-KFK 62 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ IP++ + D I+ L + + K + D IYISL+DH FA +R Q+NV++ NPL W Sbjct: 63 MIVNEIPIQFLEVTDDIVKLFKMKTTKDISDVIYISLSDHLYFATQRLQENVVIENPLSW 122 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +EA +++ +L ++LP E+ IA+H V+A++ +M DV + QL++ Sbjct: 123 EVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFVNAEVDSDMNDVTHIMQLIQ 182 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E++ +IK+ F++ + EES +Y R +THLKF R++ +I++ DE L Q VK++ + Sbjct: 183 EIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGETIDEMDEFLYQTVKKSRGAIF 242 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C ++I +F+ YQ +S +E +LA++IER+ K Sbjct: 243 ECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLK 277 >UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B640_RUMGN Length = 278 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 105/273 (38%), Positives = 174/273 (63%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI+NNN+V +D + RE VVMGRG+GF + G +I + IEK + + S L + Sbjct: 1 MLIEKIINNNIVSAVDSKGREVVVMGRGLGFGMKPGRQIQENKIEKVFRIKSQTLAEQFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ +PLE + II+ A+E L KL SIY++LTDH FAI R+QQ + N LLW Sbjct: 61 DLLADMPLEHVKVSSDIITYAKENLKLKLNQSIYVTLTDHINFAITRYQQGIKPQNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +E++LG A+ I+++L ++LP+DE GFIA+H ++A+ ++ D L++ Sbjct: 121 EIKRFYSREYELGMYAVKTIEEKLRIRLPEDEAGFIALHFLNAEYGTDIRDAVKFPNLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L++++ + + E SL Y+R VTH+KFL R+ + D + L + +++ Y + + Sbjct: 181 KILEIVEEKLQIELDETSLHYERFVTHIKFLLQRVYRKELLPDEESELAELMQKKYQKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C++ +A +I + + +S EIM+LAI+I RV Sbjct: 241 DCSKMVAAYIEEETKCSLSGEEIMYLAIHIRRV 273 >UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFG1_9FIRM Length = 286 Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 182/277 (65%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K+LNNNV+ + + ++ ++ G G+GFQKR G+ + + IE+ + L RLS Sbjct: 6 FHVKKVLNNNVIFSKNQEGQDIILTGLGLGFQKRKGDPVEAEKIERIFILKEEATGNRLS 65 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL IP++ D+I A+++L K L +IY++L DH +A++RF+Q +L N L+W Sbjct: 66 ELLKQIPIDYFYLADQIKQHAEQKLSKELNQNIYVTLCDHMYYAVERFKQGLLFQNQLMW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+R YPKE+Q+ EA+ +++ L V+LP+DE F+A+H+++A+++G+ ++ V +T+L+ Sbjct: 126 EIKRFYPKEYQIALEAIKLMNSTLNVKLPEDEASFVALHIINAELNGHEIQSVIDMTRLI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + + +++++F +++ E SL+Y R + HLKF S R++ + + L V++N P+A Sbjct: 186 KGICSIVQYEFKIDFDENSLNYTRFILHLKFFSQRLMMNEPPAEEASFLYPQVQENMPEA 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +QC+ +IA++I Y I+ +E ++L I+IER+ E Sbjct: 246 FQCSRKIALYIQKSYNYTITKSEQVYLTIHIERLLSE 282 >UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes bacterium D7 RepID=C3RIA8_9MOLU Length = 275 Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 172/263 (65%), Gaps = 1/263 (0%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 V +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP++V+ Sbjct: 12 VSSLDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVDVL 71 Query: 74 ATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQ 132 D II A+ L K L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E++ Sbjct: 72 NVTDEIIDFARNGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYK 131 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFS 192 + EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 132 IAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHLK 191 Query: 193 LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 +++ E+SL Y R VTHLKF + R++ D+ L V + YP+A++C + I + Sbjct: 192 ISFDEDSLDYHRFVTHLKFFAKRLMFGEKEAKRDDILFDIVIERYPEAFECVKNIEKHVQ 251 Query: 253 LQYQRKISPAEIMFLAINIERVR 275 Y++ +S AE ++L ++I R++ Sbjct: 252 KIYKKDLSQAEKLYLTLHIARLK 274 >UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 Tax=Lactobacillus rhamnosus RepID=C7TGE9_LACRL Length = 283 Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 174/274 (63%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNV+V D+Q E+V MG+GIGF++ AGE ++ S ++K + L + +L S Sbjct: 1 MEIYKILNNNVIVTKDEQGFEQVAMGKGIGFKRSAGETLDPSLVDKIFYLKNSDLQEHFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ +P +++ ++ I A +L KL S+++SL DH A+KR+++ L+ N L++ Sbjct: 61 SLINEVPYAILSVSEKFIDEAASQLKQKLNASLHVSLVDHIYHALKRYEKGQLISNSLIF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LYP+EF+L E L +I ++ GVQLP DE GFIAMHL++A+M+ M + + + Sbjct: 121 EIENLYPEEFELSEHFLQMIAEQEGVQLPVDEAGFIAMHLINAEMNEEMGTTVSIMKEVY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L +IK+ + Y E SLSY RL+THLKF R+++ + + D L V + YP A+ Sbjct: 181 AILNIIKYSMDVEYDERSLSYYRLLTHLKFFVQRVMKGSMLASDDAELYMLVSRKYPDAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A +I ++ + + E+++L I++ R++ Sbjct: 241 RVANKITKYVANAFHVVLPAEEVLYLMIHLNRLK 274 >UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-binding protein n=38 Tax=Enterococcus RepID=C9B3C8_ENTFC Length = 283 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 104/277 (37%), Positives = 177/277 (63%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV+ + E V MGRG+ FQK+ G+ I+ ++KE+ L + Sbjct: 1 MKIDKILNNNVVISKNGFGEEVVCMGRGLAFQKKIGDEISPEAVQKEFILRDSFAKNQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L++ IP E + +++ A+++L + +IY++LTDH +AI R ++N+ LPNPLL+ Sbjct: 61 QLMADIPAEEIEWVKQVVEQAEDKLKVEFSPNIYLTLTDHLHYAITRAKENIQLPNPLLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 + ++ YPKE+Q +EAL + ++ GV+L +DE GFIA H V++Q +M+ T ++ Sbjct: 121 ETKKFYPKEYQAAKEALLFVKQKTGVELSEDEAGFIAFHFVNSQQGNEDMQVTMTATTMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R++L +I F + + EESL+YQR++THL+F + R L+ ++ DE L V++ YP+A Sbjct: 181 RDILSIISKFFGIVFDEESLNYQRIITHLQFFAQRYLKGEGSDEQDEFLYALVQEKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + C ERI ++ ++++ AE ++L I+I+RV E Sbjct: 241 FHCVERINEYLRQTQKQEMGIAEQIYLTIHIQRVVSE 277 >UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMZ3_ACTSZ Length = 280 Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 172/274 (62%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ITKI NNN + ++ Q E VV+G+G+ F K+ G+ + S +EK ++L+ GRL+ Sbjct: 2 LKITKIFNNNAIQAENELQTELVVLGKGVAFGKKVGDSADESLVEKTFSLNKSLFAGRLT 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+LS IP E + ++ A ++LG L +SI++SL DH A++R +QN +PN LL+ Sbjct: 62 EILSEIPQEYFQLTNCVVDFANQQLGTTLSNSIFVSLPDHIFHAVERAKQNQTVPNGLLF 121 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +IQRLY +EF +G L +I+KR GVQ+ +DE GFIA+H+ +A+ G+ M D TQ++ Sbjct: 122 EIQRLYKQEFAIGLYTLQLIEKRFGVQMTEDEAGFIALHIFNARTDGSTMADTYKATQMI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L ++ + F+L E S Y R +THL+ + R ++ D+ L + K YP+A Sbjct: 182 KDILNMVGYHFNLVLDENSYDYARFLTHLQHFAQRFFVNSEPASGDDFLYRQTKIAYPKA 241 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +QC E+I ++ Y + ++ E ++L I+I R+ Sbjct: 242 YQCVEKINKYLTANYHKPLNEDEQLYLMIHIRRI 275 >UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=C2Q5B4_BACCE Length = 283 Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/275 (37%), Positives = 176/275 (64%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH-ELNGRL 61 M I K+ NNNV +V + E +VMG+GI FQK+ GE I+ S ++K + L +++ +L Sbjct: 1 MLIKKVFNNNVALV-NRTGTEMIVMGKGIAFQKKVGEYIDESIVDKVFVLEKESQVSNKL 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L++ IP E +I+ ++++ + D+IY++LTDH FAI RFQQ ++ NPL Sbjct: 60 LQLINEIPTEHFELTTQIVEYIKKQISNSISDNIYLTLTDHINFAINRFQQGQIIRNPLF 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W+I++ YP+E+ + ALTII + G +LP++E G IA+H+++AQ ME+ VT++ Sbjct: 120 WEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINAQQDNIVMEETIMVTKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +L+++ + F + E+SL+Y R VTHL++ ++R+ + I + D L Q VK++YP+ Sbjct: 180 VGGILKIVNYHFGIKLDEKSLNYNRFVTHLRYFAYRLSRNEQIVEEDSLLYQQVKESYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+ CA++I + Y +K++ EI + I+I RV Sbjct: 240 AYGCAKKIMALLKSNYNQKLTKNEITYFVIHINRV 274 >UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XN38_CLODC Length = 293 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 178/274 (64%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I +I NNNVV+V+D+ ++E ++ G GIGFQK+ G+ I+ S IE+ + + ++ Sbjct: 14 MIIQQIYNNNVVLVLDENIKKELILTGCGIGFQKKKGQEIDKSKIERTFVIQDESFLDKI 73 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L S + + II+ A+E L KL + IY++LTDH FAIKR+ +N+ + N LL Sbjct: 74 SKLASQVDEKFFEISTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIKNDLL 133 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+R++ KE+++G+ A+ I+K V+ P DE GFIAMH+V++ G+ ++ +T+++ Sbjct: 134 HEIKRIHKKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSKESLLITKIV 193 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +I++ + + ++E+ ++Y RL+THLKF + R+++ IND++ + +K Y + Sbjct: 194 KDILNIIRYYYRVEFKEDDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVKYEKD 253 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + CA +I + Y +S E+++L ++I+RV Sbjct: 254 YDCAYKIKTHVEKNYDYYVSQDELLYLTLHIKRV 287 >UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria RepID=A4VWG8_STRSY Length = 302 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/276 (36%), Positives = 178/276 (64%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++LN+N V+ +++ + ++ G+GI F K+ G+ I S IEK + L + + R + Sbjct: 24 MIIKRVLNHNAVIAQNNKNVDILLFGKGIAFGKKVGDAIPPSSIEKSFLLKNSDNMNRFT 83 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSI-YISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL +P+E++ C++II+L + LG D I YI+LTDH +I+R ++ V++ NPL W Sbjct: 84 ELFIDVPIELVYVCEKIINLGKITLGNHFDEIIYINLTDHINSSIERHKEGVVVTNPLRW 143 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I + Y +EF+LG++AL+II K L V+LP DE FIA+H V+A + ++ +T ++ Sbjct: 144 EIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHFVNANLENIFQESYRITGIIM 203 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQA 240 ++ Q+I+ +S + ++S+ Y R +TH+K + R++E +D D+ L + +K+ YP+ Sbjct: 204 KIEQIIQDYYSTEFNQDSIDYYRFITHVKLFAHRLVEGNEYHDEDDVDLLELMKKKYPRE 263 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +QC R+A FI L+Y +SP+E+++L +I R+ K Sbjct: 264 YQCGTRVADFIRLEYDYLLSPSELVYLIAHIRRLTK 299 >UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCB1_9FIRM Length = 305 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNN+V D+ +E VVMGRGIGF+ R G+ I IEK + + + RL Sbjct: 28 MKILKAINNNIVSARDENGKEIVVMGRGIGFKCREGDSIPPEAIEKIFHMDTQNETDRLK 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L S +PLE + +RII+ A++ LGK L SIYI+LTDH F++ RF+QN++ N LL Sbjct: 88 QLFSSMPLEHIEVTNRIIAYARKILGKRLNHSIYITLTDHISFSVLRFRQNMMFHNALLA 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R YP+E+ +G+ AL +I K LGV+ P DE IAMH+V+A+ ++ + +T L+ Sbjct: 148 EMRRFYPQEYSIGQYALDLIAKELGVRFPDDEAASIAMHIVNAEYDISLGEAVDITHLID 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +ML++++ E S+ + R VTHLKFL+ R L D +L A+ YP Sbjct: 208 QMLRIVRDWHRRPLDETSVDFDRFVTHLKFLAQRALRQDRPPAGDRALYDAIAALYPGET 267 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 CA R+ ++G + I E LAI+I RV Sbjct: 268 ACAHRVGAYLGDTHSFLIGDLEAACLAIHIRRV 300 >UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clostridium RepID=A6LYH3_CLOB8 Length = 276 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 105/277 (37%), Positives = 181/277 (65%), Gaps = 9/277 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNN ++ D ++E V+MGRG+GF+K G++++ + IEK + L + + + Sbjct: 1 MIIKKIFNNNAILAKDLSKQEIVIMGRGVGFKKSVGDQVDENLIEKTFILKQKDASEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP E ++ C II A+ L +L D IYI+LTDH +A+K F + + PN L+W Sbjct: 61 LLLEDIPTEHVSLCYDIIEYAKNMLSVELNDYIYITLTDHISYALKLFDEGLNRPNALIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM--SGN-MEDVAGVTQ 178 +I++ YPKEF++G +AL +I +LP+DE G IA+HL++AQ SGN +ED+A T+ Sbjct: 121 EIKKFYPKEFEIGLKALDLIQSETNKKLPEDEAGNIALHLINAQTNNSGNKVEDIAHQTK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI-NDSDESLQQAVKQNY 237 +++++L +IK+ +++ E+SL+Y+R VTHL+F R+ ++ + + D+ L + VK Y Sbjct: 181 MIQDILNIIKYTYNIALNEKSLNYERFVTHLRFFFQRLSKNEKMEKEEDDFLLKQVKTKY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A++C +I ++ ++++S E ++L I+I+RV Sbjct: 241 KKAYECMLKIQKYL----EKELSDEEQLYLTIHIQRV 273 >UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridiales RepID=C5EP68_9FIRM Length = 281 Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 169/276 (61%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LN N VV +D +RE +V G GIGFQK+ GE++ I+K Y L S E + RL Sbjct: 1 MKIIRVLNTNAVVTLDKDRREVIVTGPGIGFQKKKGEQLAEELIDKTYCLRSGEDSRRLQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +++ + + + R++ A+ K+ D +YI+LTDH A++R + + L N + D Sbjct: 61 QIVQSVSEQYLGIAGRVVDAARNEGLKVNDVLYITLTDHINSAVERLRSGIALKNMMKMD 120 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLMR 181 ++R Y KE+ +G+ A+ + + G+ L DE FIAMH+V++++ + M D+ +T+LM Sbjct: 121 MRRFYEKEYAIGQMAVGRVLEETGIDLGDDEAAFIAMHIVTSELDNSKMMDIQKITELMN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +LQ+++F F + + E+S+SYQR VTHLKF S R+ +H + DS + + Q + +A+ Sbjct: 181 AILQIVRFHFKIEFHEDSVSYQRFVTHLKFFSARVFDHGAYQDSMKEIYQVLVAQNEEAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++A FI QY +S E ++L I+++R+ E Sbjct: 241 SGVRKVADFIKKQYSYTLSVDEQLYLLIHLKRILDE 276 >UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=C6CA98_DICDC Length = 281 Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 172/273 (63%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF GE ++ S IEK + L ++ R Sbjct: 1 MRITQVLNNNVVSVIDNQGQELILTGCGLGFHSHTGEEVDDSRIEKIFRLQDDAISARFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ +PL V+ D I+ LA+ L +L + IY++L DH FA+ + ++ NPL W Sbjct: 61 DLVHEVPLAVLQLTDDIVELARRTLQQRLSEGIYVTLADHLTFALNCQRDGTVIRNPLHW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +AL +I ++L V LP+DE IA+H+V+A+++ ++ ++ +TQL+ Sbjct: 121 EVRRFYRQEYAVAAQALALIAEKLHVSLPEDEACSIALHIVNAELNDDIGNMRQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF + R++E ++ + D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSSNYHRFITHLKFFAQRVVEGMTLENDDGDLFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C E I++FI Y +S +E ++L I+I+ + Sbjct: 241 GCVEAISLFINNHYHHVMSNSEKLYLTIHIDNI 273 >UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALQ6_SEBTE Length = 281 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 105/279 (37%), Positives = 178/279 (63%), Gaps = 4/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELN--GR 60 M+I K+LNNNVV V + E ++MG G+ F K+ G+ ++ S IEK + + + N + Sbjct: 1 MKILKVLNNNVVTVKTEAGEEVIIMGCGLAFGKKRGDNVDESKIEKIFTQTREDKNLYKK 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L + + IP E + ++I+ LA+E+L KL D+IYI+L+DH FA+KRF L N L Sbjct: 61 LEDTIERIPAEYIDITEKIVKLAEEKLQMKLSDTIYITLSDHIYFAVKRFGDGQSLKNIL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 W+I+ Y E+ +G+EAL II + + LP DE GFIA+H+V+A+++ NM +V +T++ Sbjct: 121 FWEIKSSYKDEYLIGQEALKIIKDTVDLSLPDDEAGFIALHIVNAELNENMMNVMIITKI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYP 238 ++E+ ++K+ F++ EE+ +Y R + HLKFL+ R+L + + N S D+ L ++ +Y Sbjct: 181 IKEITNILKYHFNVELDEENQTYYRFIVHLKFLAQRLLNNTTCNHSNDDELFNVIRASYK 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ C +I I Y S E+++L+I+IE++RKE Sbjct: 241 ESFACTVKIFEHIKKNYNYSFSRDEMVYLSIHIEKLRKE 279 >UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKX7_DICZE Length = 289 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 169/273 (61%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF R G+ + + +EK + L ++ R Sbjct: 1 MKITQVLNNNVVSVIDNQGQELILTGCGLGFHSRNGQDVEITRVEKIFRLQDDAISTRFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +PLE++ I+ + + +L KL + IY++L DH FA++ + ++ NPL W Sbjct: 61 HLAQEVPLEILQLTADIVEMVKTQLPQKLSEGIYVTLADHLAFALQCQRNGTVIQNPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y +EF + E+AL +I + LGV LP DE IA+H+V+A++ N+ ++ +TQL+ Sbjct: 121 EVRHFYKQEFAVAEQALALIREALGVALPNDEACSIALHIVNAELGDNIGNMKQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF S R++E ++++ D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSGNYHRFITHLKFFSQRVMEGTTLDNDDGELFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C E I FI YQ ++ +E ++L I+I+ + Sbjct: 241 GCVEAINTFIKKNYQHTMTNSEKLYLTIHIDNM 273 >UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria RepID=B4F212_PROMH Length = 284 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/280 (35%), Positives = 171/280 (61%), Gaps = 5/280 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNN+VV+ +D+ ++E +VMG+GI + K+ G+ I S I K++ LS R+ Sbjct: 1 MKIKKILNNSVVISLDEAEKEIIVMGKGIAYAKKVGDEITSEQITKKFILSPKNCPQRVL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS+I L+ + D II A+E++ QDSIYI+L DH Q +I+R+++ + N +LW Sbjct: 61 DLLSNITLDYVEIADNIIQYAKEKMTLDTQDSIYIALIDHIQASIERYKEGTFIRNKILW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ Y +EF +G L +I+ R + +P+DE GFIA+H+ S + + N++ VT ++ Sbjct: 121 EIKNFYSEEFDIGLYGLKLINDRFNISMPEDEAGFIALHIASIRTNDNIQQTYKVTHFIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS---DESLQQAVKQNYP 238 + ++K+ ++ Y SL+Y+R VTHL++ S R+ ND + L +K Y Sbjct: 181 SITNIVKYYLNIEYDIGSLNYRRFVTHLRYFSIRLFSQPE-NDHEPLENELLDIIKDKYH 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 Q + C +I+ FI +Y + EI++L I+I ++ +++ Sbjct: 240 QPYMCCLKISKFIKDKYNCTLDDNEILYLIIHIAKIAEDN 279 >UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8L7_9FIRM Length = 283 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 171/277 (61%), Gaps = 5/277 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +++ K+ NNN+++ D+ E ++MGRGIG+ + G+ + S I+K + +++H+ Sbjct: 1 MKLRVKKVFNNNILLAEDENLLEVILMGRGIGYAMKPGDPADESKIDKVFKITAHQQQED 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L+ IP+ + +I+ +AQ+ L + D IYI LTDH F IKR +QN L N L Sbjct: 61 FVKLMKEIPINHLELTKKIVEMAQKELNVQFDDVIYIGLTDHIHFVIKRAKQNEQLKNAL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 LW+I++ YP+EF +AL +I+ G+QL +DE FIAMH V+ Q SG + + TQ Sbjct: 121 LWEIKKFYPREFAASMKALELIEYSEGLQLTEDEASFIAMHFVNGQQSGEAIRETVEATQ 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNY 237 +++++L +IKF + ++ E S++Y R +TH++F RI S+N S D+ L + VK+ Y Sbjct: 181 IIQDILNIIKFHYKIDLNENSINYSRFITHIRFFLQRI--RGSLNVSEDDYLFEKVKEKY 238 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P A+ CA RI ++ + +++ E+++ ++I R+ Sbjct: 239 PDAYACASRIKTYLDAKLGVELTHEEMLYFMLHIRRL 275 >UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAD7_9FIRM Length = 279 Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D+ RE V+MG+GIGFQK+ G+ + IEK++ L S + G+ S Sbjct: 1 MIINKVINNNVLSTHDENNREIVLMGKGIGFQKKVGDEVAEDKIEKKFVLDSEDEVGKFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP + IIS AQ+ + K L SIYISLTDH F ++R + L NPL Sbjct: 61 ELIEMIPHNYLNLSVDIISYAQQVMPKRLSPSIYISLTDHINFLLERSTKGELFENPLFN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ YP E+ +G++AL +I+ G++LP+DE IA+H V A+ + M D T ++R Sbjct: 121 EIKSFYPSEYLVGKKALELIESEAGIKLPQDEAASIALHFVIAEYNMGMSDTVNATTMIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + +++ + + E L Y R +THLKF + R+ +++ D+ + YP+ + Sbjct: 181 ECISIVEKELGIKLDELGLHYSRFITHLKFFAQRMFAGELLDNQDQEFLDMIINKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +E+I+ F+ +Y I E ++LA+ I+R++ Sbjct: 241 DISEKISQFVQSKYGYDIPKEEKVYLAVYIKRIQ 274 >UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXG9_9LACO Length = 281 Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 174/279 (62%), Gaps = 5/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI ++LNNN V+ + E ++MG GI + K+ G+ ++ S +E+ + L + + + Sbjct: 1 MQIKRVLNNNAVISENHSGVEVLLMGSGIAWNKKRGQDVDISKVEQTFLLKNPDTLNKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++ P++ + +RII+ A+ +LG KL + IY++LTDH AI+R++ + L NPL W Sbjct: 61 EVVIDAPMDEVLIAERIINYAKIKLGRKLNEIIYVNLTDHLHGAIERYRSGIKLTNPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME--DVAGVTQL 179 DI RLYP E+ +G +A+ ++ ++LG+ DE FIA+ + + +G E + +TQ+ Sbjct: 121 DIARLYPDEYDVGMKAVELVKRKLGIDFLDDEAAFIALSFLDVESTGGNEQNNAYQMTQI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 + E+ +++K F + E+SL+Y R +THLKF + RIL H +D+D L +++ + Y Sbjct: 181 VTEVEKIVKDFFHTEFDEQSLNYFRFITHLKFFAQRILTDTHYPDDDTDRELMESLSRRY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+A CA+++ FI +Y+ IS E+M+L ++I R+ K Sbjct: 241 PKALTCAQQVHDFIQRKYRFTISDQEVMYLTVHIARLVK 279 >UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enterococcus RepID=C2HCM5_ENTFC Length = 306 Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 176/281 (62%), Gaps = 4/281 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM I K+LNNNVV+ D++ +E +VMG+G+ F+K+ G+ I S I+K++ L++ L+ + Sbjct: 23 NMLIEKVLNNNVVITRDERNQEMIVMGKGLAFKKKVGDPIFDSCIDKKFQLTNDGLSQQF 82 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL IPLE + II +E L +L DS+YI+LTDH AI+R + + +PN LL Sbjct: 83 QELAQAIPLEYLEISCEIIEYTKEALQVQLNDSVYIALTDHLYTAIERHKMGIFVPNVLL 142 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 +DI++L+ KE+ +G++ + I + ++L +DE GFIA+HLV+AQ + ++ T Sbjct: 143 YDIKQLFHKEYAIGKKTVKKISDKYHIKLSEDEAGFIALHLVNAQGIQSQQDNTYLFTIT 202 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 ++++L ++++ + + + E+S+ + R VTHL+F R+L E + + + E L Q +++ Y Sbjct: 203 IQDILNIVRYYYKITFDEDSVHFFRFVTHLRFFLTRVLDGEKSEVGEVSEELFQVIQKKY 262 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C E+IA F+ + ++S E M+L I+ R+ E+ Sbjct: 263 KDTFGCVEKIADFLAETFNYQMSTDEKMYLTIHTARLVHEN 303 >UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Streptococcus RepID=C5WHP5_STRDG Length = 288 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 168/276 (60%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +M I K+ NNNV+ V DD +E +VMGRG+GFQK+ G+ I+ IEK + + + + L Sbjct: 4 HMIIEKVYNNNVIQVRDDSDQELIVMGRGLGFQKKIGDAIDQRKIEKTFTFQNQQTSADL 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L +P E + +I A++ LG +++++SLTDH F + R +Q V + NPL Sbjct: 64 SDLYEQLPDEELNLFISLIDQAEQSLGLTFDENLHLSLTDHLHFMVVRVRQGVSISNPLA 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQL 179 W++++ Y +E+Q+ +E L + K+L + +P DE IA+HL++AQ + + T+L Sbjct: 124 WEVRKFYAQEYQVAKEMLVHLRKKLALDIPDDEAASIALHLINAQTETDGISKSQRTTRL 183 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L++++ F E+S+SY R VTHL++ S R++ +D L VKQNYP Sbjct: 184 VIDILEIVRLHFGKLVSEDSISYNRFVTHLQYFSQRVVNGVVQGSNDAFLYDQVKQNYPN 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ C ++IA ++ Y +S E ++L I+I+R++ Sbjct: 244 SFICTQKIAHYVKENYDFDMSVDEKVYLTIHIQRMK 279 >UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Streptococcus RepID=C2LUU8_STRSL Length = 280 Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 101/275 (36%), Positives = 168/275 (61%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI KILNNNVV +D+ E +VMG+G+GFQK+ G+ ++ IEK + L + E S Sbjct: 2 MQIEKILNNNVVQALDNN-VEYIVMGKGLGFQKKVGDLVDKEKIEKTFVLENTEAVEEWS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + ++P M I++ A+ L K S +I+L DH +AI+R + V L NPL W Sbjct: 61 RVYVNLPDGEMQVFLNILTFAEAVLQTKFDPSFFIALADHLHYAIERSSEGVSLQNPLAW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 ++++ YP+E+++G++AL +I K L VQL DE +A+H V+AQ + E +TQ++ Sbjct: 121 EVRKFYPREYEIGKQALRLIAKDLEVQLADDEAASVALHFVNAQKDAGLHEKDRQMTQIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +++ F + +E+S SY R +THL++L+ RI+ S +D L + VK NYP++ Sbjct: 181 VGISDIVRLHFGYDLEEDSFSYNRFMTHLQYLAQRIVSGVSGGKNDAFLYEQVKLNYPES 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + C ++IA +I Y +S E ++L I+I+R++ Sbjct: 241 FVCTKKIATYIETSYAFDLSLDEQVYLTIHIQRLK 275 >UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clostridia RepID=C5RMW0_CLOCL Length = 304 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 103/278 (37%), Positives = 172/278 (61%), Gaps = 8/278 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M I KI NNN ++ D E VVMG GI F+K AGE+++ + IEK + L ++ + + Sbjct: 25 IEMIIKKIFNNNAILAKDSDNHEFVVMGCGIAFKKSAGEKVDKALIEKTFILKQNDASEK 84 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 LL +P E ++ C II A+ L KL D IY++LTDH AIK + + + NPL Sbjct: 85 FKLLLEDVPSEYVSLCYDIIQYAKNMLSTKLNDYIYVTLTDHIYNAIKLYDEGLKNLNPL 144 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN---MEDVAGV 176 +W+I++ Y KEFQ+G +AL I++ LG +LP+DE G I +HL++AQ++ + MEDVA Sbjct: 145 IWEIKKFYAKEFQVGLKALEFIEEELGKKLPEDEAGNITLHLINAQLNSSYNKMEDVAEY 204 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T+ ++++L ++ + + + E S+SY+R VTHL+F R+ + I D+ L + +K Sbjct: 205 TKKIQDVLSIVTYTYGITLDESSISYERFVTHLRFFFQRLNKKELIESDDDFLLKKIKAK 264 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Y +A+ C +I ++ ++ ++ E ++L I+I+RV Sbjct: 265 YKKAYDCMLKIEKYLDIE----LTDEEKLYLTIHIQRV 298 >UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostridium butyricum RepID=B1QS11_CLOBU Length = 281 Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/277 (35%), Positives = 158/277 (57%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNNVV+ +D+ E VVMGRG+ F + G+ I I+K + + + Sbjct: 1 MIIKQILNNNVVISENDKNEEIVVMGRGLAFGAKKGQVILEDRIQKVFTDEKNCDFSHFT 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS I L + +I+ + LGK L +SIYI+LTDH ++R N + N +LW Sbjct: 61 KLLSEIDLVNFEFIENLINYVKSTLGKKLNNSIYITLTDHINTLLERAATNAYVKNTMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R+Y EF++ + + I++RLG +E I MH+V+A++ NM+ +T+ M Sbjct: 121 DIKRIYRDEFKIARDVVCRINERLGSNFDDNEAASITMHIVNAELETNMKTAVDITKTMT 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQA 240 ++L ++K+ F + Y EE LSY R VTHL F + R+ + D E+ L VK+ Y + Sbjct: 181 DILNIVKYHFKIIYDEECLSYYRFVTHLLFFTQRVFNSKTYTDDKETDLFDMVKEKYSEM 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +I F+ +Y + E ++L I+I +V +E Sbjct: 241 YKCTLKIKEFLYDEYNYDLEDEECLYLTIHIAKVVRE 277 >UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lactococcus lactis RepID=Q02YC0_LACLS Length = 284 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 161/275 (58%), Gaps = 2/275 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N++ K+LNNNVV+ + E ++MG G+G+ K+AGE + IEK +AL Sbjct: 4 NVKSKKVLNNNVVIAQNTNDEETILMGLGLGYGKKAGEVVEDKKIEKIFALKVTSEQQNF 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 SELLS IP ++ + A+ + K + D++ ++ DH AI R + N+ + N LL Sbjct: 64 SELLSEIPSGIVELSILTLEKAKTKFDKTISDTVLVAFADHLNAAIIREKDNIAIKNFLL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R +P+EF L E L + ++L + LP+DE GF+AMH+V+ + E +T+LM Sbjct: 124 WDIKRFFPEEFALCLETLQKVKEKLNISLPEDEAGFLAMHIVNGTLGSGHEYATELTKLM 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYPQ 239 E+L +K+ +N+ E+ + +QR +THLKF + RIL + ++S DE L + YP+ Sbjct: 184 EEILTTLKYTLQVNFNEQDIYFQRFITHLKFFTERILSNTKSDESTDEDLFLLITGKYPR 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+ ++++ F+ ++S E +++ +++ R+ Sbjct: 244 AYIGTKKVSEFLKQTRSYEVSQNEQIYMTVHLARI 278 >UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus pumilus SAFR-032 RepID=A8FDU8_BACP2 Length = 280 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 166/276 (60%), Gaps = 5/276 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 + K+LNNN+V+ + + Q E VV G GIGF+K+ G+ ++ S I K + + L Sbjct: 4 VVKVLNNNIVLALTEAQNEVVVFGTGIGFKKKKGDTLDESAISKTFY---SDQTSPLESQ 60 Query: 65 LSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L+ IP +++ ++II + +E L K L S+ SL+DH FAI+R ++ + NP++W+I Sbjct: 61 LTAIPTDILLLTEKIIRVGEEMLNKKLGSSVLFSLSDHLTFAIQRHEEKIAYENPIVWEI 120 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMRE 182 LY +E+Q+G++ALTII K +G+ E IA+H V+AQ+ G +M D +T L +E Sbjct: 121 PHLYFQEYQIGKKALTIIQKMMGISFEDTEASLIALHFVNAQIDGQSMGDTIKMTHLTKE 180 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++++I+ F + + S++Y R +THL++ R + D+SL++ ++ Y +++ Sbjct: 181 IVKIIQNIFEMILDKSSINYSRFITHLRYFIVRQETNQPPQQMDDSLKELIQDRYMKSYA 240 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 C I + ++ ++ E++FL I+IER+ KEH Sbjct: 241 CGLIIKEMLKREFNWNVTEDELVFLVIHIERITKEH 276 >UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=3 Tax=Lactobacillus RepID=C2HQQ4_LACAC Length = 291 Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/272 (37%), Positives = 152/272 (55%), Gaps = 2/272 (0%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I ++LNNN VV D+ R V +G GI FQ++AG I IEK + + +SE Sbjct: 11 IKRVLNNNAVVAKDELNRTLVALGSGIAFQQKAGHIIPKDKIEKIFYPKDEDATNSISET 70 Query: 65 LSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 LS I + + DRIIS A GK L D IY+SL DH QFA++R + +L+ N L + Sbjct: 71 LSQIDPKYIELSDRIISEAITSSGKKLSDDIYVSLPDHLQFAVERVKNGILIQNKLTVET 130 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + YP EFQLG+ L + ++ G+ P DE IAMHL++A+ ++E+ G +L+ Sbjct: 131 MQTYPDEFQLGKRVLKYLSEKTGLDFPDDEATNIAMHLITAEEGDSLENTEGTIELINRF 190 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNYPQAWQ 242 L++I N S+SY RL+THLKF RI + S +D+ L V +Y + + Sbjct: 191 LKIISEMLGKNINSNSVSYYRLITHLKFFIQRIKKQQSQKFKADKDLYDMVIHSYHKEYI 250 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+RIA + + ++S E+MFL I+I R+ Sbjct: 251 IAQRIAGIVLHDFNYEVSEDEVMFLTIHIHRI 282 >UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator n=2 Tax=Photorhabdus RepID=C7BJX4_PHOAA Length = 284 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 171/276 (61%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + I K++NNNVV+ ID+ E ++M +GIGF K+ G+R++ I K + + H ++S Sbjct: 2 LTIIKLINNNVVLAIDENNSEMILMDKGIGFNKKKGDRLHVQDIAKVFTVEKHY---KIS 58 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++LS IP+ V+ ++II++ + L K L DS+ I+L++H FA +R + + N L W Sbjct: 59 QILSTIPVSVIELTEQIITIGKNFLAKPLNDSLLITLSEHLSFAFERVNKGYQIGNVLQW 118 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I LYP E+++G++AL I+ ++ L + E IA+H V+AQ G M D +T L+ Sbjct: 119 EIPHLYPLEYEVGKQALIHINNQIKQPLSQIEASLIALHFVNAQYEGQTMGDTLKLTNLI 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWR--ILEHASINDSDESLQQAVKQNYP 238 + ++LI + F +N S++Y R +THL++ R +H+S + D SLQ+ +++ Y Sbjct: 179 NKTVKLIHYYFHVNLDPTSVNYSRFITHLRYFLIRQNNNDHSSTIEMDFSLQELIEEKYF 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +++ CA ++ ++ +YQ K+ E+++L I+IERV Sbjct: 239 KSYNCAVKLIKYLREKYQWKVPDDELIYLVIHIERV 274 >UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Bacteria RepID=D0KIH3_PECWW Length = 313 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 168/273 (61%), Gaps = 2/273 (0%) Query: 7 KILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLS 66 KILNN++V+ D E +VMG+GIGF + G+ ++ + IEK + L + L+ Sbjct: 40 KILNNSLVLSSDADNNEIIVMGKGIGFNSKTGDILDPAKIEKTFILKDGTSPREFARLIE 99 Query: 67 HIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQR 125 H+ E + ++II A +L G+L + ++ +L DH FAI+R+++ + + N LL++++R Sbjct: 100 HVREEYVHIVNKIIDDANRQLHGRLSEQVFFTLIDHISFAIERYRKGISIQNRLLYEVKR 159 Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREML 184 YP+EF + AL I++++ ++LP++E G IA HLV+AQ NME+ ++++++ Sbjct: 160 FYPQEFAIASRALNDINQQMTLELPEEEAGNIAFHLVNAQTDIQNMENTLQSVKMLKDIF 219 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 +I++ F + +ES++Y R +TH++F R+LE++ I+ +D+ + V + YP A++C+ Sbjct: 220 NIIQYNFHIVIDKESINYSRFLTHMQFFIQRLLENSLIHSNDDFIFDQVTKEYPDAYKCS 279 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 I +I IS E+++L I+I R+ E Sbjct: 280 RLIKDYIHNLLNIDISNDEMLYLIIHIVRITPE 312 >UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus RepID=SACT_BACSU Length = 276 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/275 (36%), Positives = 171/275 (62%), Gaps = 5/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+LNNN ++ +D Q EK+VMG GI FQK+ + I + +EK + + N + Sbjct: 1 MKIYKVLNNNAALIKEDDQ-EKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDE--NEKFK 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L +P E + + IIS A+ L L D I+I+L+DH FAI+R Q +L+ N LL Sbjct: 58 QILQTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLH 117 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I+ LY KE+++G A+ + + LGV LP+DE G+IA+H+ +A+M +M T ++ Sbjct: 118 EIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKMDAESMYSALKHTTMI 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +EM++ IK F+ E S+SYQRLVTHL++ R+ + +++ DE + +++ Y A Sbjct: 178 KEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +QCA +A F+ +YQ + +E ++ ++++R++ Sbjct: 238 YQCALELAEFLKNEYQLHLPESEAGYITLHVQRLQ 272 >UniRef50_P15401 Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Bacillus subtilis group RepID=SACY_BACSU Length = 280 Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 170/273 (62%), Gaps = 3/273 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I +ILN+N +VV DQ EK+++G GI F K+ + ++ S IEK + + Sbjct: 1 MKIKRILNHNAIVV-KDQNEEKILLGAGIAFNKKKNDIVDPSKIEKTFIRKDTPDYKQFE 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L +P + + ++IIS A++ L K+ + I+++ +DH FAI+R +++ NPLL Sbjct: 60 EILETLPEDHIQISEQIISHAEKELNIKINERIHVAFSDHLSFAIERLSNGMVIKNPLLN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 +I+ LYPKEFQ+G A +I +LG+ +P DE+G IAMH+ +A+ +G+M +T ++ Sbjct: 120 EIKVLYPKEFQIGLWARALIKDKLGIHIPDDEIGNIAMHIHTARNNAGDMTQTLDITTMI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R+++++I+ Q S+N E+++SY+RLVTHL+F I SI + D + +K+ + A Sbjct: 180 RDIIEIIEIQLSINIVEDTISYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 + CA I F+ +Y + E+ ++A++I+R Sbjct: 240 FLCALSIGTFVKKEYGFEFPEKELCYIAMHIQR 272 >UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 Length = 281 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 89/274 (32%), Positives = 161/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV+VI++ EK++MG+GIGFQK G+ ++ + +EK + L+ G+L Sbjct: 1 MIIKKVFNNNVVLVIENPTEEKILMGKGIGFQKFPGDPVDLANVEKTFVLNDEATEGKLD 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +PLEV+ C ++ ++ LG + D++ I L DH FAI R ++ + + PL W Sbjct: 61 AFFEEVPLEVIQMCAHLLKSGKKVLGPHITDNLLIPLADHINFAITRVKEGIQIEYPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+ +YP+E E + + + ++LPK+EV IAMH V+A++ + + +T L+ Sbjct: 121 EIRHMYPEEVAFAESVIKWMKDKENIELPKEEVVPIAMHFVNARIGTAEVNQAFEMTTLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L +I + + + E+SL+Y RL+THL++ R ++ S + L VK YP+A Sbjct: 181 AKILDIINYHYLIQVDEDSLNYARLMTHLRYFILRQMKKESDIVEEAILYDVVKSKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA ++ + ++ E+++L ++I RV Sbjct: 241 FECALKVKKLLEETMGWIVNHDEVLYLTLHIHRV 274 >UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ6_LACLK Length = 278 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 162/275 (58%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+ NNN ++V D E+ VMG+GIGF+K+ GE ++ + I KE+ L Sbjct: 1 MRILKVFNNNALLVNDRFNNERFVMGKGIGFKKKPGEVVDVTQITKEFTFQKKSSRDSLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ +P E + +I A+E+ + S+Y+SL DH +AI R + + + NPL+W Sbjct: 61 EIYEQLPSEEIDLVAALIKEAEEQFHQTYFLSLYVSLADHIHYAISRTRDGISIKNPLVW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLM 180 ++++ Y KE+ L ++ L I+K +G+ L +DE IA+H V+A Q D +TQ + Sbjct: 121 EVKKFYAKEYALSKKYLIKINKDMGISLDEDEAAAIALHFVNARQEDSPFTDTFEITQFI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQ 239 ++L++++ +S + E+SLS+QR VTHL +L RIL+ + ++S L + V+ YP+ Sbjct: 181 DDILKIVRLYYSKEFDEDSLSFQRFVTHLHYLGQRILKGKPFKEMEDSFLFEQVQLKYPE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A +C E+I ++ + + EI +L ++++R+ Sbjct: 241 ASKCVEKILFYLSESRKTNLDIDEIAYLTLHVQRL 275 >UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP7_9ACTN Length = 295 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 155/270 (57%), Gaps = 2/270 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++ NNNVV+V DD E++ +G+GI F ++ G+ ++S+ IEK + L RL Sbjct: 1 MYIKRVYNNNVVMV-DDAGTERIAVGKGIAFGRKRGDMVDSASIEKVFTLDDPTQLSRLE 59 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP E + + I++ L +E + DS+ I+LTDH A++R Q ++ NPLL+ Sbjct: 60 RLIKGIPSEYLLIAEDIVAMLRRESDSVIDDSVLIALTDHISMALEREQAGIICDNPLLF 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +EF+L +A II LG+++ + EVGFIA+H+V+A M + + +++ Sbjct: 120 EIKRFYGREFELALKAREIIRGHLGIEISEAEVGFIALHIVNATMKQRTDHLMLSIKMIN 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L + F L Y E S+ Y+R + HL+F S R+L+ + D L K YP A Sbjct: 180 GILNTVSETFGLTYDEGSVQYERFLRHLQFFSQRVLDKSIAQSEDTFLFHLGKDQYPDAL 239 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +C ERI I +Y +S AE +L +I Sbjct: 240 ECTERIGAHIEQEYGCVVSDAEKGYLVYHI 269 >UniRef50_A3CN37 Transcriptional antiterminator, BglG family, putative n=3 Tax=Streptococcus RepID=A3CN37_STRSV Length = 280 Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 163/276 (59%), Gaps = 8/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+KILNNNVV+ ++ Q E ++MGRG+ F ++ G+ I IEK+Y LS N R Sbjct: 1 MLISKILNNNVVIS-EENQEEVILMGRGLAFGRKVGQEIPDELIEKKYILSE---NRR-- 54 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P EVM D+I+S A+E+L KL+DS ++++ DH + R + ++ L N L+W Sbjct: 55 QLLMELPAEVMEMSDKIVSFAREKLQKKLKDSAFLAMADHIHGVLLRLEDDIYLKNFLMW 114 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R +P EF++G+ A ++ + +LP DE F+A+ LV+A++ +T +M Sbjct: 115 DIKRFFPIEFEVGQYAKQLLSAYVSKELPDDEAAFMALTLVNAELENGDGTARDLTMMME 174 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQA 240 E++ ++K+ ++ EE + +R +THLKF R+L D D + +K YP A Sbjct: 175 EIMTIVKYSLEISLDEEDIYLERFMTHLKFFCERVLTDNGHRDLEDNEMFDLLKCKYPLA 234 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +IA F+ + S E ++L I++ R+++ Sbjct: 235 YETTRKIAEFLKQTRNYQTSEDEQLYLTIHLSRMKR 270 >UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFD9_9FIRM Length = 280 Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/281 (36%), Positives = 169/281 (60%), Gaps = 14/281 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG-RL 61 M + K++NNNV+ VI++ EK++MGRGIGF+K+ G+ + + IEK + + + E N + Sbjct: 1 MIVGKVINNNVISVIENNV-EKIIMGRGIGFKKKKGDIVEENKIEKIFIIEN-EFNAIKF 58 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL+++IP++ M D II A++ L K D +YI+L DH AI R ++ + + N L+ Sbjct: 59 KELMANIPMDCMLIADDIIIHAKKILKRKFSDLLYINLADHIDAAINRVEEGITIKNLLI 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 D++R YP+EF+LG+ L II+ + GV LP+DE GFIA+H+V+A+ ED V + M Sbjct: 119 IDVKRFYPEEFELGKYGLNIINNKFGVSLPEDEAGFIALHIVNAEEK--YEDKNEVIK-M 175 Query: 181 REMLQLI----KFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS---DESLQQAV 233 E++ LI + ++++ + E ++ Y R +THLKF + R+L N D L V Sbjct: 176 FEIIHLIEDIVRNEYNVIFDESNVYYFRFLTHLKFFAERLLSKGKYNSEKNLDYDLFDTV 235 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + Y +A +C I + Y IS E M+L ++++R+ Sbjct: 236 IKKYKEANRCVGVIKNVLNDMYGYDISVEEEMYLTLHVQRL 276 >UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Clostridium difficile RepID=C9XM49_CLODC Length = 282 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 163/277 (58%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITK+LNN++++ DD E ++MG+GIG +AG +N IEK + L + + Sbjct: 1 MYITKVLNNSLLLAKDDNDEEIILMGKGIGHNYKAGSELNKKDIEKIFVLHDENIKKSII 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L + I E II+ E+ KL + IY++LTDH FA++RF++ +++ N L+ Sbjct: 61 QLATEIDAEYFGIAQMIIAYGIEKYNLKLMNHIYLALTDHIAFAVRRFKEGIMIENHYLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT-QLM 180 +I+ PKE+ +G+ A+T+ + LG+ LP++E+G IA H ++AQ D + +++ Sbjct: 121 EIKEFNPKEYDIGKYAITVFKEVLGLDLPEEEIGNIAGHFINAQQDNPYSDRNKRSAKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +LQ++ + FS+ Y +ES Y+R V HLK S R L + + + + + V++N + Sbjct: 181 NAILQIVHYHFSIVYNKESFYYRRFVMHLKAFSQRFLANEPSREKIDFIYEQVQKNCKEE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +++ ++ +Y R++ E ++L I+I ++ E Sbjct: 241 YECVKKVGAYMYKEYSRELPRQEELYLMIHIHKILGE 277 >UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bacteria RepID=D1AQP8_SEBTE Length = 285 Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 164/275 (59%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++ILNNNVV+V E +V +GI F+K+ G+ I + IEK Y L S+++ S Sbjct: 1 MKISQILNNNVVIV-KRGMNEIIVYAKGIAFRKKVGQVIYENEIEKTYVLDSNDMLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLSH + ++II +++LGK D + ++L DH +FA+KR Q+ + +PL W Sbjct: 60 YLLSHSEPNHITLVNQIIKYGEDKLGKKSNDYLNLTLLDHIEFALKRAQKGQFIRSPLTW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +++R YPK FQ+G AL +I +++G + P DE IA+H V+ + N+++ + + Sbjct: 120 EVKRFYPKHFQIGIYALDLIKEQIGSEFPVDEAVSIALHFVNMEEGKSNLDEAIHSMETL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQ 239 ++++ +I + F + + E SL Y RL+THL++ R+ ++ + DE L Q +K Y Sbjct: 180 KDIISIIHYHFQITFDENSLDYMRLMTHLQYFIQRVSSNSPYSVIGDEVLNQQIKTLYSN 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+ C ++I I++ +Y ++ E +L ++I R+ Sbjct: 240 AYDCVQKIRIYVQKKYNCNLTIDEETYLMLHIHRI 274 >UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC1_9FIRM Length = 288 Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 172/279 (61%), Gaps = 7/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN++ VID++ E +V G+G+GF ++ + ++ + +EK Y + RL Sbjct: 1 MRIKKVINNNILCVIDEKGNEMIVAGKGLGFGRKVAQFVDPAQVEKVYRMEDKTGQRRLR 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP+E + + +I+ + + + L +S+ I+L DH FAI+R Q + NPL Sbjct: 61 ELVEQIPIEHLDLTEAMIAEIKAAIHQPLNESLLITLADHISFAIQRKAQGIEFKNPLAG 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 I YP E+QLG+ L ++ +R GV+L DE FIA+H+V+A+++ +M ++ +T+L+ Sbjct: 121 SILCYYPTEYQLGQRCLAMVKERFGVELSPDEAAFIALHIVNAELNTDMSEMYDITRLIE 180 Query: 182 EMLQLIKFQFSLN--YQEESLSYQRLVTHLKFLSWRILEHASINDS-DES---LQQAVKQ 235 ++Q++++ + + ESL++ R V HL++ + R+ + + DS DES + + + Sbjct: 181 GVIQVVEYYYRDRGAFDRESLTFHRFVVHLRYFAQRLFQGKLMTDSADESEAAFRALIAR 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 N + ++CA+ +A +I + + +S E+++L I+++RV Sbjct: 241 NCKEHYKCAQCVADYIEKTWHQTLSQEELIYLTIHLKRV 279 >UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leuconostoc RepID=Q03XR5_LEUMM Length = 286 Score = 176 bits (446), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 92/282 (32%), Positives = 165/282 (58%), Gaps = 11/282 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + +I NNNV++ ++ ++E V++GRG+GF+++ G ++SS IEK Y + Sbjct: 1 MLVKRIFNNNVLLA-ENSEQELVIVGRGVGFKQKIGNTVDSSKIEKTYYPQDENWTRMFN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ I + + IIS A++ LG D + I L DH QFA++R Q+N+ + N LLW Sbjct: 60 EMADTISSDYVEIASHIISTAEKSLGLSFDGYLLIGLADHIQFAVERLQKNLPIKNELLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 + + YP E+++G A+ I++++GVQLP+DEVGFIA+ V + N E +TQL+ Sbjct: 120 ETKHFYPDEYRIGALAVAFINEQMGVQLPEDEVGFIALKFVEKRAGPNFNEKATNMTQLI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--------LQQA 232 L LI+ + +L+YQRL+ HL+F R+L+ + + + S L ++ Sbjct: 180 ESALTLIRHDLLPDIDSSNLNYQRLIVHLRFFVDRLLDESHVQKGENSFDNVMSQHLSES 239 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +++ Y ++QCA+R+ + Q ++K E ++L ++++R+ Sbjct: 240 LQERYTSSYQCAQRVINYFEKQTKQKTGVNEQVYLTMHLQRI 281 >UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium difficile RepID=Q184L9_CLOD6 Length = 278 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 167/274 (60%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNNVVV + E +V G G+GF+K+ G+ I+ + I K+Y + + + + + Sbjct: 1 MNIKKIFNNNVVVSSLEDGTEIIVTGAGVGFKKKVGDLIDENLISKKYFVQDDQRD-KYN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L+ +E + II A E L ++ DSI ++LT H +FA++R +Q + LPN +L Sbjct: 60 QILNKTSIEYFKISEEIIEKANEVLNTQVNDSIILALTSHIEFAVQREKQGIKLPNLILN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++LY +EF+ G A+ I+KR+G++LP+DE G+IA+H+++ + ++ + + + Sbjct: 120 ETKQLYREEFEFGLWAIDEIEKRIGIKLPEDEAGYIAIHIINGLENSQKDEGINILEFSK 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 +++Q+I+ SL+Y RL+THLKF RIL + NDSD E + + V +NY + Sbjct: 180 QVIQIIEEVHGFKLDVNSLNYTRLITHLKFFVQRILRKETYNDSDIEDMYKLVNKNYNKP 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C E IA + +++ KIS E ++L I+I ++ Sbjct: 240 KVCTEEIAALVLDRFEYKISKEEELYLMIHINKI 273 >UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=C9XMN6_CLODC Length = 271 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 158/273 (57%), Gaps = 4/273 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KI NNN + + + ++E +++G GIGF KR G+++N IEK Y + H + + Sbjct: 1 MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDH-MQTKFL 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ELL ++ EVM +IISL GK + +SL +H FAI R + NV LPN +L D Sbjct: 60 ELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLD 119 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ +Y KEF+LG +AL II + + LP+DE G+IA+H V+ Q + N+ + ++ Sbjct: 120 IKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVNLQSNDNL--AYDTLKFVKG 177 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQAW 241 + LIK + L E SLS R THLKFL+ RI ++ D + + N+P+ Sbjct: 178 SIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNK 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + E++ ++I +++ K+ E ++L +++ ++ Sbjct: 238 EYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKI 270 >UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Arthrobacter RepID=A0JW54_ARTS2 Length = 276 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/270 (33%), Positives = 163/270 (60%), Gaps = 2/270 (0%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR-LSE 63 I K+LN++VV+V D+Q E+V++G+GIGF ++AG RI+ +G+++ + +S ++N L E Sbjct: 4 IKKVLNSSVVLVEDEQGVERVLLGKGIGFGQKAGTRIDGTGVDRVF-VSLDDINHENLVE 62 Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 LLS +P+E + +I+S A+ +L IY+ LTDH FA++R ++ +++ N L W++ Sbjct: 63 LLSQVPVEFVELTRQIVSDAESEGLELDPHIYLVLTDHLHFAVERKKRGLVVVNRLAWEM 122 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + +YPK++ +G A+ +++ G LP DE IA HL +A+ D V +L+R + Sbjct: 123 RTVYPKQYAVGSRAVELMNTHKGFALPDDEAANIAFHLANAERGKAGLDSMRVVELIRAV 182 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 ++ + + L+ R VTHL++L+ R + D+ L ++ + YPQA Sbjct: 183 TTIVSNTAGVRVDRQDLNSSRFVTHLQYLAERFFTSRLLESDDDFLFHSLSERYPQAIAT 242 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIER 273 AER+ F+ ++Q ++ E+ FLA++I R Sbjct: 243 AERVRAFVQKEHQTRLPNEEVAFLALHIAR 272 >UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD93_9FIRM Length = 283 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/278 (33%), Positives = 168/278 (60%), Gaps = 3/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNN+++ D Q E +V G GI FQK+ G+++ S IEK + + +++ + Sbjct: 1 MVIHKILNNNLILSRDGQGHEVIVKGCGIAFQKKKGQQVEESRIEKIFTAENAQISKEIQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP + + + ++ +E+ G KL DSIY SL+DH AI R + + L N LL Sbjct: 61 GYLTAIPEKYLDFVEAFVNDVKEKEGMKLNDSIYFSLSDHIMGAISRLENGIRLQNMLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++LY KE+++G E L +++ V L DE GF A+H V+A+ G D ++ ++ Sbjct: 121 DIKQLYHKEYEIGLELLKKVNEMFEVDLSADEAGFFALHFVNAE-DGGKTDSYQISIIVH 179 Query: 182 EMLQLI-KFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L ++ K+ ++ +QE +L YQR +THLK+ + R L D ++ L + +K+ Y +A Sbjct: 180 QILDIVEKYYDNMEFQENNLYYQRFLTHLKYFAQRFLHKELHYDENQELFKIIKEQYREA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C + I + + +Y+ ++ E+++L I+I+++ ++H Sbjct: 240 YGCVKMIYLMMEEEYKYAMTEDEMLYLTIHIQKITEDH 277 >UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIH6_9FIRM Length = 276 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 162/274 (59%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNN ++V + + +E++VMGRG+ F+ + G R+ +E+ + + S Sbjct: 1 MKVLKILNNNFILVENAKGQEEIVMGRGLRFKTQVGGRLEEKDVERRFVSGQGGILKDYS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ IP E + + A L DS + +L DH +A++R Q+ ++L N LLW Sbjct: 61 RMIEEIPQETLEAVQEAVDAAGSSLSCPLDSQAFFTLLDHLIYAMERCQKGIVLQNRLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+E++ G++A+ +++RLG++LP++E G IA HLV+AQ G ME +++ Sbjct: 121 EVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNAQTEGMTMERTMSSVKMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +++F ESL + R VTHL+F R+LE + ++D L + + + YP Sbjct: 181 KDILTVVQFHMKKELDTESLYFSRFVTHLQFFVQRLLEGRMLEETDSFLYEQISRQYPNE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A +I+ ++ + I+ EI++L I+I RV Sbjct: 241 LEAAMKISGYVEKSTKTLITREEILYLTIHITRV 274 >UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-binding region n=2 Tax=Bacilli RepID=B1MZ35_LEUCK Length = 286 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 162/276 (58%), Gaps = 4/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEY-ALSSHELNGRL 61 M + K LN N V+ +D+QQ+E ++ G+GIG+ K+ G++++ S + + + L++ E+ + Sbjct: 1 MLVKKSLNANAVIAVDNQQQEFILFGKGIGYGKKNGDKVDESIVNQTFMPLNNTEIKEYV 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL IP+ ++ RI+S A++RL KL +YI L+DH FAI+R + + N Sbjct: 61 -QLLEAIPITILDATRRIVSEAEKRLNTKLNPMLYIMLSDHLNFAIERAMTGINITNRAF 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W+++ YP+EF LG AL +I++++ + LP++E IA HL++AQ + G +D L Sbjct: 120 WEMKNYYPEEFDLGLFALQVIEQQMNIVLPEEEAANIAFHLINAQTAEGIKKDGLNYANL 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + M +++ N ES+ YQR +THLKF + R + D + L + V YP+ Sbjct: 180 ISSMTTILRHSMGQNIDIESVHYQRFITHLKFFAERFFADKMLIDDNSKLFETVATAYPK 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A + A I ++ Y +K++ E+ FL ++I R+R Sbjct: 240 ATEVAFTIKDYLTTVYDKKMTKEELTFLIVHINRLR 275 >UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium difficile RepID=Q184X6_CLOD6 Length = 277 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 158/274 (57%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV D+ +E ++MG+GIGF K + + IEK++ ++ E L Sbjct: 1 MVIKKVFNNNVVFARDNSGQEVILMGKGIGFNKFTKDLVEIDKIEKKFIFNNEESLSELH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IPL+ + II + +E LG L DSI I+L++H + +KR + ++ +PL W Sbjct: 61 SLLDRIPLKDVELVSEIIQMGREELGDNLNDSILITLSEHISYMLKRMDEGLVFQSPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+++YP E+ ++A+ + K+L +P E+ FI +H +AQ+ + +M++ +T+++ Sbjct: 121 EIRQIYPNEYNFSKKAVEYLRKKLDKNIPDSEIAFITIHFANAQLETKDMQETLLLTKII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L +IK+ + + E S Y R ++HL+ R L + N D SL +K Y Sbjct: 181 DNVLDIIKYHYGIEINEYSFDYTRFISHLRCFIKRQLSGENTN-VDTSLLDIIKMKYKSD 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + CA+++ F+ Y+ KIS E+++L +++ R+ Sbjct: 240 YNCAKKVKNFLEKTYKWKISENELLYLTLHLNRL 273 >UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH42_PEDAC Length = 283 Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 153/257 (59%), Gaps = 3/257 (1%) Query: 21 QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII 80 + E V++GRGIGF K+ GE + I+K++ L+ + S +L+ + E + +II Sbjct: 19 EDECVLVGRGIGFSKKPGEFVEEDRIQKKFLLADKGTMAKFSRILNEVTSEELLVTSKII 78 Query: 81 SLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALT 139 S+A++ L KL +SIYISLTDH + I+R+ Q L+ N LWDI+R YPKEF++ +A+ Sbjct: 79 SMARQELKVKLSESIYISLTDHIHYVIERYHQGKLMTNTFLWDIKRYYPKEFEVALKAVH 138 Query: 140 IIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKFQFSLNYQEE 198 +I+K+ ++L DE G+IA H ++A G + A +T+L+ E++ ++ + Sbjct: 139 LINKKFNIKLKDDEAGYIAFHFINATNDIGEDGNTALLTKLVHEIINIVSLNLDMVIDSS 198 Query: 199 SLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 +S R +TH+KF S R+++ D ES L V+ Y ++++ ++I +F+ +YQ Sbjct: 199 DISSYRFITHVKFFSQRLIKRMQSADETESDLFNLVRNKYEKSYKIVKKIDLFLNKEYQY 258 Query: 258 KISPAEIMFLAINIERV 274 +S + ++ ++I R+ Sbjct: 259 SMSKNDQLYFMMHIHRL 275 >UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC09_VIBFU Length = 279 Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 157/274 (57%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG-RL 61 I ++LNNNVV D+ RE ++ G+G+GF+ + G+ I+ EK + L+ + RL Sbjct: 2 FTILQVLNNNVVSAADESGRELILTGKGLGFKAQPGKAIDPHVAEKVFVLNQGDATSERL 61 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ +PLEV+ + I A++ L K + +++SL+DH FAIKR + + +PNP Sbjct: 62 KVLMESLPLEVVQMTEFICDEAEKALNRKFGNGLFVSLSDHLDFAIKRSKDGLSIPNPFE 121 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 W+I+ Y KEF+ E + I GV L K E IA+H+++A S N+ D +T+++ Sbjct: 122 WEIRSFYDKEFKFAEGIIQKILLNWGVLLEKSEACSIALHIINADNS-NLNDFKSLTKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L ++K+ F++ E S +Y R VTHLKF + RI + I + D L + + + Sbjct: 181 YQILNIVKYVFNVELDENSQNYHRFVTHLKFFAQRIGKKEVITNHDSLLSDLLIKELTKT 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 QC + I+ F+ Y +S +E ++L I+I+RV Sbjct: 241 HQCVDTISEFVRKTYGHPMSDSEKLYLVIHIDRV 274 >UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=D2C0F0_DICD5 Length = 279 Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 162/276 (58%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K+LNN++V+ DD RE +VMG+GIGF R G+ I IEK + S E Sbjct: 1 MIVQKVLNNSLVLSSDDDNREVIVMGKGIGFNSRPGDEIAQEKIEKLFVTQSFEKRSGYI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E LS IP EV+ IIS A +L K+++ I+ +L DH FAI+R ++ +++ N LL Sbjct: 61 EGLSAIPDEVIEMAAMIISRANLQLSSKVREQIFFTLADHLTFAIERSRKGIVIQNRLLP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ--- 178 +++R YP++F++ EA+ II ++ G++LP++E G IA HLV+ Q G+ DVA Q Sbjct: 121 EVRRFYPQQFRVASEAVAIIRQQYGIELPEEESGNIAFHLVNGQSEGD--DVAQAMQSVK 178 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++++ L+++ F ES++Y R +TH++F R+ E D L V + YP Sbjct: 179 MLKDIFNLVQYHFKKEIDTESINYSRFMTHMQFFLQRLQEGEISTARDSFLLAQVIKEYP 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ A I ++ ++ + E+++L +++ R+ Sbjct: 239 DAYRGALLIRDYVKVRLDITLGGNELLWLTVHLVRI 274 >UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Streptococcus RepID=B9WWD1_STRSU Length = 245 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 138/216 (63%), Gaps = 2/216 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+ NNNV+ ID Q RE +VMG+G+GFQK+AGE +++S IEK + L + LS Sbjct: 1 MQIEKVYNNNVIQAIDQQGRELIVMGKGLGFQKKAGEELDTSKIEKTFVLQNDYQQSDLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + + + II+ A+E L D S+Y++L DH F +R ++ + + NPL W Sbjct: 61 SLYLQMESGEVEVVNAIINRAEETLEVQFDLSLYLALADHLHFVFQRCREGIFIENPLSW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 ++++ YPKE+Q+G EAL ++ +RLG++L K E IA+HLV+AQ +G ++ +++++ Sbjct: 121 EVRKFYPKEYQIGLEALQLVQERLGLELGKGEASSIALHLVNAQKNGAFGKETQTISKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI 216 ++L +++ F EE SY R VTH+++ + R+ Sbjct: 181 TQILDIVRLHFGSVTYEEDTSYHRFVTHIQYFAQRV 216 >UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Bacillales RepID=C4L0D3_EXISA Length = 282 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 166/278 (59%), Gaps = 7/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I KILNNN V+V D+ EK+ +G G+ F+K + +N IEK + + N + Sbjct: 2 IKIKKILNNNAVIV-SDEGEEKIAIGPGVAFKKAKNDIVNPHKIEKLFIMPE---NDKFQ 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS IP+E + IIS A++RL + I+I LTDH FAI+R + L N LL Sbjct: 58 QLLSRIPVEHFTVSEDIISYAEKRLETSFNEHIHIVLTDHISFAIEREMDGISLRNKLLN 117 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+ LY E+++G A+ I ++L VQ+PKDE FIA+H+ + ++ G++ T ++ Sbjct: 118 EIKILYRNEYEIGLWAIEHIAEKLNVQMPKDEAAFIALHIHTMKVKGGDLRKTVKQTTIV 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R+M+Q I + ++ +E+ LSYQRL+THL+F+ R+ H + DE + + ++ + A Sbjct: 178 RDMIQSISRRLDVSIEEDDLSYQRLLTHLRFVMDRV-NHYDHHTIDEDMLRMIQTKFTSA 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + CA +A + Y + +E+ ++ ++I+R++ +H Sbjct: 237 YACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQH 274 >UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterminator n=7 Tax=Firmicutes RepID=Q18DC6_CLOD6 Length = 278 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/278 (30%), Positives = 161/278 (57%), Gaps = 2/278 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 MN I K+LN++VV+V D + E +++G+GIG+ K+ GE I S + + + + + Sbjct: 1 MNYIIKKVLNSSVVLVHDTKDNEFILLGKGIGYGKKTGEYICGSNDNQMFVPVENTKSKQ 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL+ IP++++ II A++ L ++Y+ L DH FAI+R ++ + + N + Sbjct: 61 FLELMDDIPVDILKITQEIIVEAEKLLNSSFNKNLYLILADHFNFAIERMRKGIKITNRV 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQ 178 W+I+ YP EF++G A+ ++++RLG+QLP++E IA H +A S GN D + Sbjct: 121 FWEIKNYYPNEFKVGMVAIYMVEERLGIQLPEEEAANIAFHFANAMASDGNSYDTIKYAK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ E++ + F + ++S+ Y R +TH+KF R + ++ D+ L +K++ P Sbjct: 181 VIGEIINIFIFSLNRTLDKKSMHYMRFITHIKFFVERFFSDSMLSSGDDLLFNQMKRSNP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A ++ F+ +Y +K++ EI FL ++I RV++ Sbjct: 241 KEMLIALKVRDFLEKKYGKKLTNEEIAFLVVHIARVKQ 278 >UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7VAG3_ENTFA Length = 281 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 167/277 (60%), Gaps = 5/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSS--HELNGR 60 M++ K LNN++++ +D Q +E ++MG+GIGFQ + G+ + + I+K + L S L Sbjct: 4 MRVIKTLNNSLILCLDKQGKEVILMGKGIGFQLKKGDLVPADKIQKVFKLDSLSDALKKD 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L P +++ RII A + KL S++ +L DH + AI+R Q+ ++ N L Sbjct: 64 YIKLFEAAPDDLIICVKRIIDYANAKFDFKLNKSLFFTLVDHLKHAIERSQKGIVFQNRL 123 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQ 178 L +IQ+ YPKEF++G A+ +I+K++ VQLP++E G IA H+V+AQ NME+ + Sbjct: 124 LIEIQKYYPKEFEIGCYAIQLINKKMNVQLPEEEAGNIAFHIVNAQSEQANMEETMLSVR 183 Query: 179 LMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++++L ++ + F ++S+ Y R VTHL+F R+++ + + D+ L +VKQ + Sbjct: 184 ALKDILAMLGYLFPEKKVDKDSMLYLRFVTHLQFFIARMIKKEELPEKDDFLLASVKQRF 243 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ ++ A +I ++ + + E+++L ++I RV Sbjct: 244 PKEYRAALKIKEYVQEEMGASANQDELLYLTLHISRV 280 >UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAD4_NAKMY Length = 289 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 157/275 (57%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ K+ NNNVV+ D++ E V+ GRG+GF+ AG ++ S +E+ + S R++ Sbjct: 1 MQVLKVFNNNVVLGRDERGVEHVLFGRGLGFKVTAGATVDESRVERRFGPSGTGGVDRIA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVL-LPNPLL 120 L++ IP E + RI+ LA+ RLG + D I + L DH FA++R + + PL Sbjct: 61 ALVNEIPPEDIDLTGRIVELARGRLGPHITDHILLPLADHLSFALRRAAEGAGEIEYPLR 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQL 179 W++Q LYP E Q+ AL ++ + GV+LP+ E +A+HLV+AQ + ++ A +TQ Sbjct: 121 WEVQYLYPAEVQVARAALDLVAQERGVRLPEVEAVPLALHLVNAQFDTSDISTTAQMTQT 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + L +I+ ++ + E S+ R VTHL++L R + + ++ L A++ P+ Sbjct: 181 LHRTLDIIREEYGVEIDEGSVEVARFVTHLRYLFLREQQGRKLRETPAELHAALQSARPR 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A RI + QY IS EI++LA+++ R+ Sbjct: 241 EYTSAGRIGTLLADQYGWAISTDEILYLALHVSRL 275 >UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AZS3_ENTCA Length = 279 Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 163/276 (59%), Gaps = 2/276 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M+I K+ NNN +V++D +E+VVMG GIGF R G+ ++ IEK + ++ + Sbjct: 2 LTMEIVKVFNNNASLVLNDNHQEEVVMGSGIGFGLRPGDTVDQKKIEKRFIINDQKSIAD 61 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L +LL I + I+ L +E + ++ ++L DH FA+ R ++ + + PL Sbjct: 62 LEQLLKRIEYRDLQLASDILKLFEEAFQCESNPALLVALADHIGFALTRAREGMKIQTPL 121 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 W+++++YPKE+++G +A+ ++ KR + +PKDE FI +H V+ N ME+ +++ Sbjct: 122 EWELKQVYPKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVNFLGDNNGMEETMLISK 181 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +M+++L +I + + ++++S+ + R +TH+++ R + + SL ++ YP Sbjct: 182 VMKDILTIINYHYGKEFRQDSIYFSRFITHIRYFVKRQMSNELPAQPASSLLDVIQLKYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA +I F+ +YQ +I+ E+++L +++ R+ Sbjct: 242 LDYECAMKIKQFLENRYQWEITEDEVLYLTLHLNRL 277 >UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKZ6_PEDAC Length = 284 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 162/275 (58%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNNV + I E + GI F+K+ G++I I K Y L S + LS Sbjct: 1 MKVKKILNNNVAI-ISKGTHESIAYSPGIAFKKKIGQQIEEKEISKLYVLDSKDRLEHLS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+H +++ ++I+ + L K+ D +Y++L DH FA+KR Q+ + +PL+W Sbjct: 60 FLLTHSDKKIITLVNKIVDYGENYLKVKVTDYLYLALLDHISFALKRGQKGQFIASPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+ +++G +A+ +++ V P+DE I++H ++ Q N+E ++ Sbjct: 120 EVKKFYPQYYEIGIKAINWLNQTYEVNFPEDEAIPISLHFINVQDEQINVEQKVKDITVL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQ 239 R++L +IK+ F++N+ E S++Y RLVTHL++ R+ H +D + L + ++ YP+ Sbjct: 180 RDLLNIIKYHFNINFDETSINYMRLVTHLQYFIDRLNCHELSTKTDVNVLYEQIRTIYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ ++I +I + ++I P E +L I+I RV Sbjct: 240 AFRAVQKIDKYISKSFGQEIFPDEYTYLMIHINRV 274 >UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria RepID=C3RIJ4_9MOLU Length = 281 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 159/276 (57%), Gaps = 5/276 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + ++I K+ NNN V I D+ + ++ G GIGFQKR G+ ++ S IEK Y + R Sbjct: 4 ITLKILKVFNNNSVAAISDELGDIILTGSGIGFQKRIGDEVDESRIEKTYFFKDDQ-QKR 62 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 + + +P ++I++ A + L I+++++DH FA+KR ++ + LPN + Sbjct: 63 FEQSIETVPAIYFEITNKIVNQANKELDTDFSGEIFLAISDHISFAVKRKKEEIYLPNVV 122 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L + + LY KE+++G AL I+++ G++L DE G+IA+HLV+ + + + L Sbjct: 123 LSETKVLYKKEYKVGLWALDYIEEKTGIRLDDDEAGYIALHLVNFSLDNKANNATKIVTL 182 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 +E+L +IK ++ +E+SL Y R+ THLK+L+ RI E + D+ +++ +K++ Sbjct: 183 TKEVLNVIKLSMKVDLEEDSLGYARISTHLKYLAERIFRDEIDELQDTTADIREMLKEDL 242 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 + C RI I +Y ++SP E +L I+I++ Sbjct: 243 RLSL-CINRIVKLIRDRYDYELSPDEQTYLCIHIKK 277 >UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria monocytogenes RepID=D2NVK8_LISMO Length = 276 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 155/275 (56%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++ ++ NNN ++V D EK+V+G+GI F KR G I+ +EK + + S E+ R Sbjct: 2 LRVKRVFNNNTILVHDSNGLEKIVIGKGISFNKRVGNIISEEAVEKTFIVDSPEITERFV 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSI-YISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ +P+ + ++II A+ L D + Y+ L DH +AI R++ + N LL Sbjct: 62 QLIKEVPINHLDLTNKIIKDAESELNVTFDELTYLGLADHINYAISRYKSGHQIKNALLL 121 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I++ YPKEF + ++ I V+L +DE GFIA+H V+ Q G + + T++++ Sbjct: 122 EIKKFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALHFVNGQQEGIINNTLITTEVLK 181 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L +++ S+ EESL+Y R +THL+F RI + + + + V + YP+A+ Sbjct: 182 KVLLILEDTLSIKLDEESLNYLRFITHLRFFIERINSEGAREKEEPDMIEQVFKLYPKAY 241 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + I+ +I + E+M+L ++++R+ K Sbjct: 242 ASVQIISDYIQETLNCTVYAEELMYLTLHVQRLIK 276 >UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacterales RepID=B0K352_THEPX Length = 275 Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 161/272 (59%), Gaps = 4/272 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 Q+ K+LNNNV + DD+ E +V+G+GIGF KR G+ I +EK + + + SE Sbjct: 3 QVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKFSE 62 Query: 64 LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L+ I +V+ + II++A++ GK L + I+I+L DH FAI+R + + NP + Sbjct: 63 LMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFDIE 122 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ LY ++ + +AL +I++RL + LP+DE GFIA+HL +A + + + T+L+ + Sbjct: 123 IKALYKDDYNIALKALELINQRLNISLPEDEAGFIALHLHAALENAGLSNTVKNTRLVSQ 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++ I+ +S+ Y RLVTHL+F R+ ++A + + L ++K+ + +A+ Sbjct: 183 LVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTN---ELLVSIKKKFKKAYN 239 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A +++ I Q+K+ E ++AI+I+R+ Sbjct: 240 IAMQVSKIIEDTLQKKVPEEETGYIAIHIQRL 271 >UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBZ8_9FIRM Length = 341 Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 158/274 (57%), Gaps = 6/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ K+ NNN V V+ RE +++G G+GF +R G+ I+ S + K Y + + EL + Sbjct: 70 MQAVKVFNNNAVSVVMPDGREAILVGNGLGFGRRPGDVIDKSRVSKVYYVQN-ELQTKFL 128 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L ++ +VM +RI SLA E G L S ISL DH FA++R ++ LPN +L Sbjct: 129 KMLDNVTPQVMQAAERI-SLAAEEQGILLSSKSTISLVDHISFALERVEKGTFLPNLMLS 187 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LYPKE+ +G+ AL ++ + GVQLP+DE G+IA+HLV+ G + + ++ Sbjct: 188 ETRMLYPKEYAVGQRALELVRQFCGVQLPEDEAGYIALHLVAGAADGAL--AYDTVKFVK 245 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 + ++I + ++EESL RL HLKFL+ RIL H D+ ES+ + Q + Sbjct: 246 AVKEIICDTYHCTFEEESLETTRLTVHLKFLAARILRHTPWQDAGLESMYTVLLQRDSRN 305 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C +RI ++ ++ ++ E ++L I++ ++ Sbjct: 306 EVCLQRINAYLRQEFDYELDHQEQVYLLIHLTKI 339 >UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ76_ENTFA Length = 285 Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 84/274 (30%), Positives = 160/274 (58%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ +ILNNNV ++ E +V +GI F+K+ G+ ++ ++K + L S ++ S Sbjct: 1 MKVKQILNNNVAILTKGTN-EVIVYSKGIAFRKKVGQSVSKEEVDKVFVLDSADVLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL++ + II A+E K D +Y++L DH +A+KR ++ + NPLLW Sbjct: 60 YLLANTEESLFEIVRSIILRAEELFQKKATDYLYLTLLDHIDYALKRGKKGQYISNPLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +++R YPK +QLG E + ++K V P+DE IA+HLV+ Q + N ++ VT++M Sbjct: 120 EVRRYYPKSYQLGVEVVERLNKEYNVSFPEDEAASIALHLVNIQEAVQNSQENEKVTEIM 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++ ++++ ES++Y R + HL++ RIL + + +++D L Q + Q YP+A Sbjct: 180 KDIVSIVQYHLGAPMNHESINYTRFMQHLQYFVQRILTNDTYSENDSELYQQISQLYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++I +++ + + IS E +L ++I R+ Sbjct: 240 YGAVKKIELYVIGTFGKLISEDEKTYLMMHIHRM 273 >UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=Lactobacillus RepID=Q040S8_LACGA Length = 282 Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 155/277 (55%), Gaps = 6/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT+ILNN+ V+ + E + +G+GI + K+ G+ + I K + S L Sbjct: 1 MKITRILNNSAVISENQDHEEIIALGKGIAYGKKVGDEFDKQKIYKIFTPLSDSQRKLLL 60 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E + +I+ L E +L DS+YI+LTDH +++R ++ + L N +W Sbjct: 61 ETIHETDPIFFQISQKIVDRLKHEENIELADSVYITLTDHLATSVERAKKGLYLSNKFIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YPKE++ G AL ++D + + P+DE GFIA+H++S ++ ++ D + ++ Sbjct: 121 EVKNYYPKEYRYGLWALKLLDAQFDLNFPEDEAGFIAVHIISGELGNDISDFSKSVDFIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL----EHASINDSDESLQQAVKQNY 237 + +++++ F ++ +SL+Y R HLKF W+ + + +S D + +K + Sbjct: 181 SITKIVRYYFHIDIDYQSLNYNRFAVHLKFF-WKAMMYKKDQSSFGDLSREILNVIKNSD 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A++CA +I +I +Y +++ EIM+LAI+I ++ Sbjct: 240 IEAYKCALKIKEYISEKYNYELNNEEIMYLAIHINKI 276 >UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS0_9FIRM Length = 284 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 159/284 (55%), Gaps = 9/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN V+ IDD ++E V++ GIGF + G + S +EK + L ++ + Sbjct: 1 MTIKTILNNNAVIAIDDNEKEVVIVKNGIGFNSKKGMVLKDSDMEKVFILQEKNVSDDMI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS I E + +I+ + L + DSIY++L+DH + A+ R ++ + N + W Sbjct: 61 HLLSLISEEYIEVSKKIVDYGRTVLKTGVHDSIYVTLSDHIELAVSRKKKGIAFDNAMTW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME---DVAGVTQ 178 I++ Y +E+ +GE AL II GV LP++E G IA+H V+A++ E D A ++ Sbjct: 121 SIKKTYREEYHIGEVALKIIQIECGVTLPEEEAGLIALHFVNAKIHNEPEVTHDFAYISV 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVK 234 +++++ IK+ E SL Y +L+++L+ L+ + + + S +S + Q K Sbjct: 181 FVQDLINFIKYFLCTEMDENSLEYNQLLSYLQTLALVLDDRKAAEGSSDSRYHEMLQYAK 240 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER-VRKE 277 ++ +A+ C++RI F +Y +I P +I+ L + I + ++KE Sbjct: 241 VSFKRAYDCSDRIRRFTKEKYDLEIQPEDILHLTMYINKFIKKE 284 >UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCP1_BACSK Length = 277 Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 157/276 (56%), Gaps = 5/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K NNN+ +V D E VV+G G+GF ++ G+ I+ + + K+Y+ S + S Sbjct: 1 MNLIKSFNNNIALVEDAAGLEWVVIGTGVGFNRKKGDAIDETLVTKKYSAESSSTHP-FS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ +IP+ V +I A+ +G +L D ++++L DH +AI+R + P+ W Sbjct: 60 ELIDNIPVAVFEVAAMMIRKAETIIGVQLSDHLFLALADHLNYAIQRTLDGIDYPHSHPW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 ++ RLYPKE + +EA+ I+ L V LPK E F+ H V+AQ +M++ +T+++ Sbjct: 120 ELDRLYPKEHKAAKEAVRIVFDELDVLLPKSEESFLTYHFVNAQGQQRHMKETVKMTEVI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNYP 238 ++++I+F + L EES Y RL+THL++ R L E + L + ++ Y Sbjct: 180 NRIIKIIEFDYELQLNEESFDYLRLLTHLRYFVLRQLHQEKVEYKQFNPELIELIQGTYK 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+QCA +I + QY ++S E ++L ++I R+ Sbjct: 240 KAYQCATKIGRILHKQYGWELSSNEELYLTLHIWRL 275 >UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7R7_9FIRM Length = 201 Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 121/176 (68%), Gaps = 1/176 (0%) Query: 17 IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATC 76 +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP+ V+ Sbjct: 22 LDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVNVLNVT 81 Query: 77 DRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGE 135 D II A++ L K L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E+++ Sbjct: 82 DEIIDFARKGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYKIAA 141 Query: 136 EALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQF 191 EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 142 EALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHL 197 >UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGY1_9FIRM Length = 274 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 162/275 (58%), Gaps = 7/275 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK +NNNV + +D + +E V+ G+GIGF + E + S I K + ++++ Sbjct: 1 MRITKKINNNVALGVDPKGKEVVIFGKGIGFHEIPYELNDLSLISKTF----YDIDPGYL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IP ++ +I+ A+ ++G +L S+ L DH F + R ++++ + NPL Sbjct: 57 ELLSEIPEDIFNVSSKIVDYARSKVGCELNPSLAFMLADHINFGVIRLKKSIDITNPLTN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 DI+ LY E ++G +AL +I++ L ++ PK E IA+H+++A+ M +M + VT+++ Sbjct: 117 DIKYLYKTEMEIGYKALDMIEEDLQIRFPKGEAASIALHIINAEGMQNDMNNTIKVTKIL 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAVKQNYPQ 239 +E+ ++++ F ++S+ Y R V HLK+ R+ E ++DS + L +++K +P Sbjct: 177 KEITKIVEESFDFKIDQDSIDYSRFVIHLKYFVQRVKEPKEKVSDSTKLLLKSIKAQFPD 236 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C ++I ++ + K S + ++L ++I R+ Sbjct: 237 TYGCFKKIESYLKKTLKLKYSEEDQLYLLVHINRI 271 >UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF6_9ACTN Length = 287 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 151/272 (55%), Gaps = 4/272 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +QI K+ NNN V I D ++ ++ G GIGFQK G+ + + IEK Y E + + Sbjct: 12 VQIVKVFNNNAVASITDDGQDVILTGAGIGFQKHTGDAVEENAIEKRYYFHDGE-SDSIY 70 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +H P+E I+ A++RL L+D + I+LTDH FA++R + N + Sbjct: 71 GLFAHTPVEFFNISKSIMDEAEKRLHIVLKDQVLIALTDHIVFAVERARNGEGFSNLMFS 130 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ LY +E+++G + ++++ LG++LP+DE FIA+H+++ Q + V L+ Sbjct: 131 EVRGLYRREYEIGLWGIHLVEEALGIRLPEDEASFIALHILNGQSDLSATAVLDTIHLVS 190 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNYPQ 239 +Q+I+ + + + + LSY RL THLKFL+ RI + D D+ + + + P Sbjct: 191 GCIQVIEELYGITFDSDELSYIRLTTHLKFLAQRIFSGTTDEDGFFDQQMFDLLCERNPL 250 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 A +CA +I+ F+ + +S E +L I++ Sbjct: 251 AHECARKISAFLKSDFLYSLSDREEFYLMIHV 282 >UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDI0_9FIRM Length = 309 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/275 (32%), Positives = 147/275 (53%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI NNN V I D + + ++ G GIGFQK+ G+ ++ + IEK Y E + + Sbjct: 29 MKIIKIFNNNAVATISDNKNDLILTGSGIGFQKKIGDEVDENRIEKRYVYEGGEKDA-MY 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L P E I+ A E L QD I+LTDH FA++R++ LPN +L Sbjct: 88 QLFLRTPEEYFKLSQSIMEKAMEELNISFQDQTIIALTDHICFAVERYETGTELPNLVLD 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY +EF++G ++ I++ L + LP DE G+IAMH+++ + N + QL+ Sbjct: 148 EIKTLYKEEFKIGLWSVKYINQELKIDLPIDEAGYIAMHIINGANNTNSNSTMKMIQLVD 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE--HASINDSDESLQQAVKQNYPQ 239 + +I + + ++SL Y RLVTHLKF++ RI H D+ + + + Sbjct: 208 GCVSVISDSLGIYFDKDSLDYTRLVTHLKFMAQRIFSGIHEEEGFGDKEMISFLSNKDTK 267 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C I +I + ++S E+++L I+I ++ Sbjct: 268 ILTCITAIRNYISSTFSYELSEKELLYLMIHIYKI 302 >UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-binding protein n=4 Tax=Enterococcus RepID=C9A770_ENTCA Length = 282 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 160/273 (58%), Gaps = 5/273 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I K+LN++VV+V D + +E + +G+GIG+ K+ G+ I + I++ + + +G+ ++L Sbjct: 4 IKKVLNSSVVLV-DKEGQEMIALGKGIGYGKKVGDSIADTQIDQVFLPIDEKKSGQFADL 62 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 + IPL I+ LAQ+ L L +IY++L+DH FA++R Q+ + + N L W+I Sbjct: 63 VDEIPLYYFEMTKEIVQLAQKMLPYPLNSTIYLTLSDHLHFAVERQQKGLSVTNRLYWEI 122 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV--TQLMR 181 + Y EF+ E+AL ++ ++ ++LP++E IA HL++AQ S E+ G+ +L+ Sbjct: 123 KNYYTDEFRAAEQALRLLKEKYQIELPEEEASNIAFHLINAQ-SNTEENQDGLKKAKLIG 181 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++++ + S+ Y R +TH++F R + + DE L + + YP A Sbjct: 182 LIVNMVRYSIQQDVNTNSIHYNRFITHVRFFVDRFFLDGLLQEEDEGLYRQMWALYPNAM 241 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++ +I +YQ KI EI++L ++I R+ Sbjct: 242 EIATKVKAYIDKEYQTKIPVNEIVYLGVHINRL 274 >UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clostridium RepID=A6M213_CLOB8 Length = 284 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/274 (30%), Positives = 159/274 (58%), Gaps = 6/274 (2%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLSE 63 I K NNN+V V + +E+++ +GIGF +++G+ I + +EK + + + + Sbjct: 10 IIKSYNNNIVSV-NMNGKERILFAKGIGFGRKSGDTIEKGTEVEKIFVIEDEDNLRNFKQ 68 Query: 64 LLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ ++ E C+++IS +A E L + I+++L DH FA+KR + NP L + Sbjct: 69 VIENVDEEFFVLCEKMISYVANELKENLDERIHVALVDHLNFAVKRLSDKEEIENPFLME 128 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ LYP+E+ L E+ ++ V++P+ E+GFIA+H+ SA+ SG + + T L+ Sbjct: 129 IRALYPQEYSLAEKVAEVLQNEKKVKIPEGEIGFIALHIHSARNSGKLSNTIKNTHLINS 188 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +++ ++ + + + SL Y R +THL+F RIL+ SI + + +K Y +++ Sbjct: 189 IIEYVEAKTEIKIDKTSLDYARFLTHLRFAIKRILDDISI---ENDFIKEIKSKYKLSYK 245 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +A + L+ ++K+S EI +LA++IER RK Sbjct: 246 VSKGVAKILVLKLEKKVSDDEIAYLAMHIERFRK 279 >UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MNU4_9FIRM Length = 275 Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 165/273 (60%), Gaps = 7/273 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++ KILN+NVV+ D+ QR + G GIGF K++G+ ++ + I Y L + R Sbjct: 2 LKVEKILNHNVVLCRDESQRNLIAFGTGIGFNKKSGDSLDEARIVNLYGLKNL---ARYE 58 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+S ++++ ++II +E + D +I++SL DH QF++KR+++N+++ N L Sbjct: 59 KLISETEDQIVSLSEQIIRELEECFSQDFDRNIHVSLLDHLQFSVKRYRENMIVQNVFLD 118 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + YPKEF ++AL ++++ L + LP E GF+ MH+ +A ++ Q+M+ Sbjct: 119 ETAYFYPKEFAFAKQALAMVNESLKINLPLSEAGFLCMHIHAALHHEDLSFTNFSFQVMQ 178 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L LI+ ++ ++ + QRL+TH++F R LEH+ I + LQ+ +++ Y +A+ Sbjct: 179 DILGLIETDLGIDLKQYEDARQRLMTHIRFAIKRSLEHSEIQN---DLQEVIQERYVRAF 235 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++I+ + +Y ++ AE+ +L+I++E + Sbjct: 236 ALAKKISTVVQEKYDLSLNEAELAYLSIHLENI 268 >UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lactobacillus RepID=C7TEP6_LACRG Length = 290 Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 9/282 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN VVV D+ R+ +V+ RGIGF + G+++ K Y H Sbjct: 1 MIIDAILNNNAVVVRRDK-RDIIVVERGIGFHAKKGDQLTLQDSMKVYVPEDHAKLKIAM 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P E + RII A+ +L K + I L DH FA+ R + ++L N LLW Sbjct: 60 ATIASLPDEYLTIAARIIQEAEVQLHTKFNSYLLIELADHIHFAVTRLHEQLILHNKLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQLM 180 +IQ Y F++GE ALT I ++G QLP+DE GFIA+ VS +S + TQ++ Sbjct: 120 EIQIAYEPAFRMGEWALTEIANQIGEQLPEDEAGFIALKFVSNDLSQQHPVNSVAFTQML 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS------DESLQQAVK 234 + ++I +Q LN ++ YQRLV HLKF R+ ++ D++L ++ Sbjct: 180 ANITKIIFYQLGLNMNAKTPEYQRLVIHLKFFLQRVYATSTAKTPVSPEPYDQALLAHLQ 239 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q+Y QA++C E + F+ + IS E ++L ++I R+ K Sbjct: 240 QDYTQAYRCMEDVVKFMQQKLPGPISKNEQIYLTLHIARLAK 281 >UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 Tax=Bacilli RepID=A8FJ69_BACP2 Length = 282 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/274 (29%), Positives = 154/274 (56%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I K+LN++VV+ D Q+E V+ GRGIG+ ++ G+ I ++ + + Sbjct: 2 FKIKKVLNSSVVLAEDQNQQEMVLFGRGIGYGQKPGQMIEEKKADQVFMSVDNMRAKEFL 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P E + RI+ A++RL L +Y +L DH FA++R ++N+ + N + W Sbjct: 62 QLLDSMPQEFIDLTQRIVQYAEKRLNSSLNSGVYFTLMDHLNFAVERHKKNINITNRVYW 121 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLM 180 +I+ Y +EF++G+ AL +++ L +QLPK+E IA HL++A + +D +++ Sbjct: 122 EIKNYYTEEFEVGKYALELVNDTLSIQLPKEEAANIAFHLINALGEESDSKDSMKYAKMI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ L+++ ++ +E++ Y R +TH+KF R + ++D + L + + YPQA Sbjct: 182 GSIVNLVRYTLNMKMDQENIHYSRFITHVKFFVERFYANKLLSDQENELFEQIAHLYPQA 241 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A +I +I + I E+ +LA++I R+ Sbjct: 242 MDVAFKIKDYIKQVHSIVIPNDELTYLAVHIHRL 275 >UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Actinobacteridae RepID=B3DQG5_BIFLD Length = 279 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 158/278 (56%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ E ++ GRG+GFQ + G+ ++ S + + + S L+ Sbjct: 1 MEILRVFNNNVVLAKGGDGGEVILTGRGLGFQAKPGQTVDESKVVRTFVPSDGRDPDHLA 60 Query: 63 ELLSHIPLEVMATCDRII--SLAQERLGKLQD---SIYISLTDHCQFAIKRFQQNVLLPN 117 ++L+ IP E++ R++ S+ + LG+ + ++ ++L+DH A++R ++ + + Sbjct: 61 QMLADIPPEII----RVVVESMQEAGLGERETGSTTLVMALSDHVANAVERVRRGIDITY 116 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGV 176 PLL ++ LYP+E+ G L ++ RL V LP E +AMHLV+A +G++ + Sbjct: 117 PLLGEVSNLYPQEYAQGRAMLASLNARLDVTLPDGEATALAMHLVNAGFATGDLSYTYTM 176 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T +++++L +I + + S++ R +THL++L RI +H + D + + ++++ Sbjct: 177 TGVIQQLLDIIDHSYGITLDRSSVNVGRFITHLRYLFVRIHQHQQLTDEPAPVMKVIRES 236 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 YP A +CA IA + L+ IS E +LA+++ RV Sbjct: 237 YPAALRCARTIASLLELRLDTDISDDETAYLAMHVARV 274 >UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=A7GGX3_CLOBL Length = 275 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 165/274 (60%), Gaps = 5/274 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N + K+LNNNV++ + ++ + +++G+GIGF + GE ++ IEK Y ++ +++ Sbjct: 3 NYTVKKVLNNNVIIA-NWREEDAILVGKGIGFNSKKGEVLSKDKIEKVYIKTTSKMSENY 61 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++L +I +++ + II+ +++ L KL + ++ISL DH FA++R ++ + + NP L Sbjct: 62 NKVLDNIDNKIVGISEEIINFSEKALNTKLNEGVHISLPDHINFALRRIEKGINIENPFL 121 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++ +YPKE+++ +AL +I++RL V LPKDE GFI +H+ + + + T+ + Sbjct: 122 EELGIIYPKEYEIAMKALNMINERLKVNLPKDEAGFICLHIRAGITKQQVSESLAYTKKI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++LI + SLSY R +THL F+ R+ E +I + L ++K+ Sbjct: 182 SKVMELISKLKGKPLDKNSLSYVRTLTHLNFMIERVKEDKTIKN---ELLDSIKEEMKSE 238 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++A+ I ++ KI EI ++A++++R+ Sbjct: 239 FSIAIKVAMLIEKLFEIKIPEDEIGYIALHLKRI 272 >UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococcus faecalis CH188 RepID=C7V767_ENTFA Length = 283 Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 151/274 (55%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILN N ++ +D+ ++E V G+GIG+ ++ G+ ++ I + + + Sbjct: 1 MIIRKILNPNTILAVDEDKKEYVFFGKGIGYSRKIGQAVDDEEINRVFIPVDNRQIQEYL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L IP +II A++ L KL S++ +L+DH F+I+R + + + N + W Sbjct: 61 RLFDSIPAVYFDITQQIIKKAEKLLNTKLNTSLFFTLSDHLNFSIERHKNGLNILNRVFW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 +I+ YP EF +GE AL ++ K LG LP++E +A H+++AQ ++ + +L+ Sbjct: 121 EIKNYYPIEFSVGEYALKLLKKELGQILPQEEAANVAFHIINAQTIASSTSKGLEYAKLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++K++ +++ E + YQR +THLKF R E I ++D SL + + Q YP+A Sbjct: 181 GGISDIVKYELKMDFDREDVHYQRFITHLKFFVERYYEGKMITENDSSLFEQIAQLYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A + +I + K++ E+ +L ++I R+ Sbjct: 241 LTVAFNVKDYIEIINDNKVTKEEVAYLTVHINRL 274 >UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FGL9_9BIFI Length = 303 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 165/279 (59%), Gaps = 11/279 (3%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNNVV+ D + E ++ GRG+GFQ + G+RI+ S + + + S + Sbjct: 19 TVEVLRVFNNNVVLA-KDGKSEVILTGRGLGFQAKPGQRIDESKVVRRFVPSDGRDPDHM 77 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-----KLQDSIYISLTDHCQFAIKRFQQNVLLP 116 +ELL+ IP E++ R+++ A R+G + + ++ ++L DH AI+R + V + Sbjct: 78 AELLADIPPEII----RLVAEAMTRIGMGAQVERRPALVMALADHLTGAIRRINKGVNVE 133 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAG 175 PL ++Q LY +E++ E+ + I++ LG LP+ EV AMHLV+A + G++ Sbjct: 134 YPLQAEVQSLYAREYEQAEKLVAILNTYLGGILPEGEVSAFAMHLVNAGFTTGDLSRTYK 193 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +T ++++ML++I+ + + + S++ R +THL++L RI ++ ++ + + ++K+ Sbjct: 194 ITGVIQQMLKVIEQSYGVKLDQHSVNVGRFITHLRYLFVRISQNKQLDREPQPIINSIKE 253 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Y A +CA++IA L+ ++ E+ +LA++I RV Sbjct: 254 TYSDAMRCADKIAAVAALRLDAHLTEDEVAYLALHISRV 292 >UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mucilaginosa RepID=D2NQD9_9MICC Length = 289 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 164/284 (57%), Gaps = 10/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++I NNNVV+ +D +E V++GRGI F KR G+ I+ S +E+ + RLS Sbjct: 1 MRISRIYNNNVVLTVDHYGKESVMIGRGIAFGKRKGQLIDPSAVEQTFVPEQGMSGERLS 60 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LS IP E+++ + S + E +L +S + L DH +A+ R + V + PL Sbjct: 61 MTLSEIPAEILSIATLLESKVRAEGALELSNSFILPLADHLHYAVVRARDGVRVQYPLAP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 ++ LYP+E + G L ++ +RL V+L +E +A+HLV+AQ + +M +T++ Sbjct: 121 EVTVLYPREVEYGRTVLEMVRERLQVELDPNEAIPLALHLVNAQFATADMSQAFRMTEVF 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDE----SLQQAV 233 ++ ++I+ + +S+S R VTHL++L R AS N D+DE SL A+ Sbjct: 181 AQVFEIIEASYERKIDPDSMSAARFVTHLRYLFVRA-SRASANRTEDADEVSQPSLLAAL 239 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + P+A+ CA+++ + + +Q ++ ++ E+ +L I+I R+ ++ Sbjct: 240 RADVPRAYACAQKVLLVLQMQLKQSLTRDELTYLTIHIARLARD 283 >UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMX4_SEBTE Length = 282 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 152/271 (56%), Gaps = 3/271 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I KILNN++V+V +D EK++MG+G+GF GE+++ IEK ++L L Sbjct: 2 IKKILNNSLVLV-NDGDEEKIIMGKGVGFSSHIGEKVDIKKIEKIFSLEKKNTLQNYERL 60 Query: 65 LSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 IP I+ A +E G +++SLTDH ++++R + ++L N L+WDI Sbjct: 61 AMEIPEIYFEIAGEIVERANKEFTGIFNAQLFLSLTDHISYSVERVNKGIVLQNRLIWDI 120 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMRE 182 + Y KEF +G ALT+I +++G+QLP++E IA +LV+AQ S M + +++E Sbjct: 121 KAFYSKEFTVGLWALTLIKEKIGIQLPEEEASNIAFYLVNAQSSALKMGETILSITMLKE 180 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L +I++ + ++ L Y RLVTH++F R+LE + + + L + YP + Sbjct: 181 ILNIIQYHTNHLLNKDDLHYLRLVTHIQFFVQRVLEGKMLKNREIFLLNQYVRLYPSETK 240 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIER 273 C E+I ++ + IS E +L I+I R Sbjct: 241 CLEKINQYVKNCVGKDISVDEKFYLLIHIIR 271 >UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9A6G2_ENTCA Length = 278 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 164/276 (59%), Gaps = 10/276 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I KILNNN V+V D ++ + +G G+GF+ + G+ + S IEK + L ++++ R Sbjct: 5 LKIKKILNNNAVLVGQDG-KDFIWIGTGLGFKMKPGQTADESKIEKVFVLHKNKVSERFL 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS IP ++ D IISLA+ + + L +++Y+SLTDH K +Q + + N L W Sbjct: 64 SLLSSIPTNYVSLADDIISLAKAEIKQELSETLYVSLTDHLYNLFKLHEQGITVTNRLSW 123 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME---DVAGVTQ 178 +I++ YP+EF++G++AL +I + G+ ++E G IAMHL++AQ++ ++ DV + + Sbjct: 124 EIKKFYPQEFEVGKKALEMIGQETGIVFEEEEAGNIAMHLINAQVTDEVDQPKDVQSIAK 183 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +R+++ LI+F + E SL++ R +THL+F R+ + ++ L Q Y Sbjct: 184 KIRDIISLIRFSNKIQIDENSLAFDRFITHLRFFFQRLKARPDVVKANPLLGHVSGQ-YA 242 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ I ++ + ++ E ++L ++I+++ Sbjct: 243 DAYKTMLLIEKYLDV----PLNDDEKLYLTLHIQKL 274 >UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=B1IKY9_CLOBK Length = 285 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/274 (29%), Positives = 158/274 (57%), Gaps = 6/274 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSS-GIEKEYALSSHELNGRLS 62 Q+ K+ NNNV++V +++ EK++ +GIGF K G+ I I+K + + + Sbjct: 10 QVIKVFNNNVLLVCKNKE-EKILFSKGIGFGKHPGDNIPFDIKIDKIFTMQNENNFNNFK 68 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+S++ +++ C+ +IS+ + L + L + I++SLTDH + IKR +N + NP L Sbjct: 69 FLMSNVDSDIIGLCEEVISMISDELNEPLNEKIHVSLTDHISYTIKRLMENNSIENPFLV 128 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LY +EF + ++A+ +++ RL + +P +E GFI +H+ SA+ G + + L Sbjct: 129 ETETLYKREFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSARNEGKLSNTIKYAFLSN 188 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +++L++ + ++ + SL Y R +TH++F RIL + I + L A+K Y ++ Sbjct: 189 TIIELLEDELNMEIDKSSLDYARFLTHIRFAIERILNNTPIKN---ELLTAIKNQYKISY 245 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A++++ I + +S E ++AI+IE+ R Sbjct: 246 KLAKKVSKIIEDELSVNVSKEETAYIAIHIEKFR 279 >UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillaceae RepID=GLCT_BACSU Length = 281 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 157/271 (57%), Gaps = 2/271 (0%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 + K+LNNNV++ + E V++G+GIGF K+ + I G +K + L + + +L Sbjct: 7 VKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKL 66 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L ++ +++ + +I R L + I+I+LTDH FAIKR QQ + NP L + Sbjct: 67 LDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMET 126 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 Q LYP+E+Q+ +E + +I+++ G+ LP+ E+GFIA+H+ SA + + +V +QLM ++ Sbjct: 127 QSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPLSEVNQHSQLMAQL 186 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 +++I+ F + +ES++Y RL+ H++F RI + + E L +K YP + Sbjct: 187 VEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEP-EKLMLLLKNEYPLCYNT 245 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A ++ + ++ + AE ++L +++ R+ Sbjct: 246 AWKLIKILQQTLKKPVHEAEAVYLTLHLYRL 276 >UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBW1_MACCJ Length = 283 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/281 (29%), Positives = 162/281 (57%), Gaps = 6/281 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSS---GIEKEYALSSHEL 57 M + K+LNNNVV+ D+ E +++G+GIGF K++G + S IEK + L S Sbjct: 1 MKYHVLKVLNNNVVITEGDEG-ETILIGKGIGFGKKSGAVLKDSELEHIEKIFKLKSSSE 59 Query: 58 NGRLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 R LL+ EV+ T +I + G++ D+I +SLTDH FA+KR+Q+ +++ Sbjct: 60 QERYKSLLTLTNDEVIQTVIEVIEFIDHKTNGEMNDNILLSLTDHIIFALKRYQEGIIVA 119 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV 176 NP L + + LY +EF + E+ + +++ RL VQ PK EVGFIA+H+ S+ + ++ D+ + Sbjct: 120 NPFLKETESLYRQEFLIAEQVVAMLNDRLQVQFPKTEVGFIALHIHSSVNNHSLRDMRLM 179 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T++++ + +I+ + ++S++Y R + H+ F R++ + + ++L+ +KQ Sbjct: 180 TEVVQNAITIIEQDLKVIVDKDSITYSRFLRHITFTVQRVMSDERMPEQ-KTLENLLKQQ 238 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP + + +I + + + +E+++L ++I+ E Sbjct: 239 YPLCYNTSVKIVKMMQTYLNKPVYDSELVYLTMHIQAFNTE 279 >UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium perfringens RepID=Q0TV06_CLOP1 Length = 282 Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 82/275 (29%), Positives = 155/275 (56%), Gaps = 6/275 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLS 62 ++ + NNN+V+V DD ++E ++ +GIGF + G I ++ IEK + + Sbjct: 10 EVKRAFNNNIVLV-DDDEKEIILFAKGIGFNCKKGSIIPENTNIEKIFTIQDENNIANFR 68 Query: 63 ELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ + +A C+ +I ++++ +L + I+I L DH FAI+R ++ +L NP L Sbjct: 69 RVVGSNDEKFIAFCEELILEISRDFSEELNEIIHIGLIDHISFAIERMKKGEILRNPFLV 128 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LYPKEF+ + + ++ GV + DE+GFIAMH+ SA+ +G + T + Sbjct: 129 EIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIAMHIHSARTTGKISHTIKFTYIAN 188 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ I+ F++ SLSY R ++HL+F R++ + + + L +K YP+++ Sbjct: 189 TAVEYIEDAFNIEVDRTSLSYARFISHLRFAIERLINNTPVKN---ELLSIIKLKYPESF 245 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + AE I I + +++ EI +LA+++ER+RK Sbjct: 246 KVAEEIGKAINEDFSLEVAEDEIGYLALHVERIRK 280 >UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2Y2_ERYRH Length = 282 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 159/280 (56%), Gaps = 9/280 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITKI NNN V D + + VV G GIGFQ + G+ I++S IEK + + S + Sbjct: 1 MHITKIFNNNCVATFIDGE-DMVVTGSGIGFQHKIGDEIDASRIEKMFKVVS-DSQDDFE 58 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP++ I+ A L L D+I ++LTDH +A+ R + +V LP Sbjct: 59 QLLNKIPVDYFEATRAIVEYAHSVLDTSLSDTINVALTDHIYYAVLRSKDDVELPGLFTE 118 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-M 180 +I+ YP EF++G AL I+KR V LP+DE+G++ +H+V+A +GN+ A T + + Sbjct: 119 EIKMYYPDEFKVGAWALNYINKRFEVTLPQDEIGYLVIHIVNAS-NGNISHQAQNTMMFL 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQA---VKQN 236 ++++ +++ + + +Y RL THLK+L+ RI+ + S N DES+ + + Sbjct: 178 KDVMAIVQSELGIEMNSSQPAYTRLATHLKYLAQRIIGNQSSNHPFDESIGELNLFIAAK 237 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + C +I ++ ++ ++S E M+LAI++ ++ K Sbjct: 238 LKKYNDCVAKINQYVHTRFDYELSMDERMYLAIHLYQIMK 277 >UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B732 Length = 280 Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 154/273 (56%), Gaps = 6/273 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 ++ LNNN VV D+ +E +++G+GIGF+++AG+ I + G K S E N + Sbjct: 12 EVIGTLNNNGVVAKDELNKEVILLGKGIGFKRKAGDVIENPG--KNIKCYSLEKNTGKNV 69 Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L P+ + + II A++ G + I + L DH F+I R + ++++ NPL DI Sbjct: 70 LQGVDPI-FLEIANEIIRYAEKEFGDIDTKILLPLADHIAFSIDRIKNDMVISNPLTSDI 128 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + L+ E+++ +A II +RLG ++ DE+G+I++H+ +A S V ++ + Sbjct: 129 RLLFADEYEVATKARKIIKRRLGYEITDDEIGYISLHIHAALSSQPPARSLQVASIIHQT 188 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 + ++ F++ E+S++Y RLV H+KFL RI D S+ K+ +P+++ Sbjct: 189 VTYVEETFNIVIDEDSIAYIRLVNHIKFLMVRIDRK---EDVQVSMTDYTKEKFPESYAV 245 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A R+A +I KIS EI +LAI+IER+R+ Sbjct: 246 ACRVADYIEKLILEKISDEEIGYLAIHIERIRQ 278 >UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCR8_9ACTN Length = 307 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/280 (33%), Positives = 160/280 (57%), Gaps = 15/280 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++TK LNNNV V D+ E VV+G G+G+ +R E I +E+ SS E +L Sbjct: 31 VKLTKTLNNNVAVAQDNNGCEFVVIGLGVGYVERGAE-IPQEKVER--VFSSVEQQSQLY 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ IP I+ AQ L +L DSIYI+LTDH + +R Q+ +L N L W Sbjct: 88 QLVESIPQRYFDLAREIVDYAQSTLSVRLADSIYIALTDHIAYVHERAQKGLLPKNSLTW 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRL---GVQLPKDEVGFIAMHLVSAQM--SGNMEDVAGV 176 +I + Y +EF++G++ + +++ L L E IA+HL++A+ +G+ + + + Sbjct: 148 EISQYYRREFEVGKKVVELLEDELDGTSALLGDAEAASIALHLINAEQEEAGSRQGIEEL 207 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVK 234 +LM +++Q+I++Q L Y E L YQRLV H++F R+L E + + +L + V+ Sbjct: 208 -KLMNQVMQIIRYQAHLVYSEGDLDYQRLVVHVRFFVQRVLGGERSQVPG---ALSKMVR 263 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++YP+A+ AE + F+ + R I EI +L I+I R+ Sbjct: 264 ESYPEAYSVAEHVRAFVEGKLARSIGDEEITYLIIHIARL 303 >UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8N0_9FIRM Length = 281 Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 85/278 (30%), Positives = 154/278 (55%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNN V+ D+ +E +V+G+GI F+K + I+ I K + L + ++ Sbjct: 1 MLIYRILNNNAVITKDEHNKEMIVIGKGIAFKKTMYDEIDPEQIIKVFVLKDKQDRNKVE 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ IPL+ I A+E L KL D + + L DH +++ + Q+N+ PN +L Sbjct: 61 ALLADIPLDYFEIAKEIKVAAEECLACKLDDGVIVRLADHIHYSVIKSQKNISTPNLMLN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I++ YPKE+ +G +A+ ++++R L ++E GF+ H+VS++ D + ++++ Sbjct: 121 EIRQFYPKEYDIGRQAIQLVNQRFQSNLDENEAGFVTFHIVSSESQEGPVDFHEMLEVLK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWR-ILEHASINDS--DESLQQAVKQNYP 238 ++ I+ F L+ + Y RLVTHLKF R +L+ N S +SL + + YP Sbjct: 181 MIITTIEDYFQLHLDTTTFDYSRLVTHLKFFIQRMLLQGRQTNQSLQGDSLYEMLVAQYP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q Q + + L Y +++ ++ M+L I++ R+ K Sbjct: 241 QINQFLNHMNARLLLDYNYELTDSDRMYLIIHLARLLK 278 >UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 Tax=Enterococcus faecalis T2 RepID=C7CXK4_ENTFA Length = 282 Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 153/274 (55%), Gaps = 8/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K LNNN+V+V D EKV+ G GIGF+KR G+ I+ S I K + ++ E + Sbjct: 12 MIVVKTLNNNIVLVQDQMGNEKVLFGTGIGFKKRQGDSIDESLISKIFTPNAEE---QTD 68 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + + E+++ RII + L K + SL DH F+I Q+N NP+ W Sbjct: 69 HKIDNFQPEILSVSARIIESGELILNQKFGTGLLFSLADHLTFSIYSIQEN---DNPIKW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 ++ LY KE+Q+G++AL I+ +GV L +E FIA+H V+AQ+ NM D +T+++ Sbjct: 126 EVPHLYYKEYQIGKKALEIVQNEMGVTLLPEEASFIALHFVNAQIDQPNMVDTLQITEVI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++++ ++ F + + Y R +TH+++ R D+ +++ +++ Y ++ Sbjct: 186 KKIVKSVQTIFDTILDKTTADYSRFITHIRYFIIRQKNSQESLKMDKQIRELIQERYMKS 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C I + YQ KIS E+++L I+IER+ Sbjct: 246 YACGLIIKEMLERDYQWKISEDELVYLVIHIERI 279 >UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAF5_9ACTN Length = 272 Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 85/264 (32%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYAL------SSHELNGRLSELLSHI 68 +V D E +V+GRG+ F + AG+ I+ + +EK YAL S ++ RL+ LL I Sbjct: 1 MVTSDDGSELIVIGRGLCFGRHAGDAIDEASVEKTYALQEGTSQDSRTID-RLAHLLESI 59 Query: 69 PLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 P + + I+ + + L + D I I+L DH A++R ++ + NPLL +IQ+ Y Sbjct: 60 PTVNLVISEDIVQMLRRELNVDINDKILIALADHISLALERERKGISCENPLLLEIQQFY 119 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLI 187 KE+ L AL II + +G+Q+ ++E GFI +H+V+A M + + QL+R++L ++ Sbjct: 120 RKEYALAGRALQIIKEYMGIQMSEEEQGFITLHIVNATMPQRSDRLIVSVQLVRDVLAIV 179 Query: 188 KFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERI 247 +++ + SL Y+R V HL+F + R L+ + + ++L + + YP A+ CA+ I Sbjct: 180 SKRYATTLDDTSLPYERFVRHLQFFAQRALDPTAGQINGDALFRIDETAYPCAFLCADAI 239 Query: 248 AIFIGLQYQRKISPAEIMFLAINI 271 A + Y ++ AE +LA +I Sbjct: 240 AAHLSSTYNVVVTDAEKSYLAYHI 263 >UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMV1_9FIRM Length = 272 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 152/276 (55%), Gaps = 14/276 (5%) Query: 4 QITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I K+LNNN ++V+D + +RE +++G GIGF R GERI S+G K Y L + G+ S Sbjct: 3 RIIKVLNNNGILVLDVESRREVILLGNGIGFGHRTGERIESTGQAKRYEL----VTGKTS 58 Query: 63 EL--LSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L ++ I + RII A+ +G L I I + DH A+ R ++ LPNP Sbjct: 59 ALQQVNSIEPVYIEAAGRIIEEAEGTMGVLSHDILIPMADHIALAVSRAREGRELPNPFR 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ E+Q + + II + GV + +DEVG+I +H+ + N+ + +L+ Sbjct: 119 HDIKALFSSEYQSAMKGVAIIRELTGVTISEDEVGYITLHIHAGLSEENVAAAMDMARLV 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNYP 238 ++ + I+ + N +SL Y RL +H++++ R E A ++ +Q + ++P Sbjct: 179 QDSMHQIESRMGFNLASDSLGYNRLASHVRYMIARARKGERAGLD-----MQDYARTSFP 233 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++ AE++ + + ++P E FLAI+I+RV Sbjct: 234 KPYEVAEKVCRDMEKRLGLPVAPEETGFLAIHIQRV 269 >UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFN4_EXIS2 Length = 259 Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 148/253 (58%), Gaps = 3/253 (1%) Query: 27 MGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQER 86 MG GI F K+ + ++ + IEK + + S E + E+L+ PL+++ ++IIS A+ Sbjct: 1 MGPGIAFGKKKKDPVDPTKIEKMF-IPSFENAEQFKEILTTTPLDIIDLSEQIISYAEGE 59 Query: 87 L-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRL 145 L D I++SLTDH A++ ++ +++ N L +I+ LY E+Q+GE A+ I+++L Sbjct: 60 LKTPFHDYIHVSLTDHLAHAVRLAREQLVVHNRLAEEIRLLYTAEYQIGEWAVAHIEQKL 119 Query: 146 GVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 V LPK+E IA+HL +A Q NM L+ E+ + I+ F + S++Y R Sbjct: 120 AVSLPKEEAANIALHLYNARQRHPNMATALQTATLLNELREQIEAFFGQTIETTSMTYYR 179 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEI 264 TH+K + RI + +++D D + AVK Y A++CAE +A ++ + Q + +E+ Sbjct: 180 FFTHMKLVLARIEQGQTLHDMDNVILSAVKTRYTDAFRCAENMAAWLEQELQTTVPQSEV 239 Query: 265 MFLAINIERVRKE 277 ++A+++ER+R + Sbjct: 240 GYMALHVERIRPD 252 >UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ9_LACLK Length = 279 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 89/280 (31%), Positives = 161/280 (57%), Gaps = 6/280 (2%) Query: 3 MQITKILNNNVVVV-IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+I KILNNNVV+V +D+ ++E++VM G+GF K+ G+ I ++ + LS L + Sbjct: 1 MRIKKILNNNVVLVSVDNFKKEQIVMQNGLGFNKKVGDEIPEDSNQQVFVLSD-SLYKKY 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L ++ ++IIS A+E+ +L + I+++LTDH I RF + ++L N L Sbjct: 60 EHLTNNTDPIAAQIAEKIISYAEEKYQLQLNEMIHLTLTDHIDGVISRFSKGIVLRNELN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM--EDVAGVTQ 178 +I R+Y +E+++G A+ + + + DE FIAMH+++ ++ + E + Sbjct: 120 LEISRIYTQEYKVGLYAIDQLREVIKSSDLGDEAAFIAMHILNNRLDLDTSEEQIRTTLG 179 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + +++++++ F+ Y E SY R V HLK L+ R+ ++ + DE L +A+ YP Sbjct: 180 FISDIIKVVETYFNKKYDETLFSYYRFVMHLKGLAKRMYA-KNLFEEDEILYKALVAAYP 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + +CAE++A I L+Y IS E FL + IE++ +E+ Sbjct: 239 EPARCAEKVAKMIFLKYSLNISSEEKAFLTLYIEKLNREY 278 >UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-binding protein n=12 Tax=Enterococcus RepID=C9BK18_ENTFC Length = 291 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 156/277 (56%), Gaps = 6/277 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + + + K LN+N V+ IDD EK+ MG+GIGF + + + +K + L S E R Sbjct: 17 LTVYVMKKLNHNAVL-IDDDGIEKIAMGKGIGFSAKVSKPFDVEDADKLFVLDSKEKIKR 75 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPL 119 SE++S IP+E M + +I L R+ DS IYI+LTDH FAI+R +++ + + Sbjct: 76 FSEIVSQIPIEFMDFAEEVIELITARISSPLDSNIYITLTDHIYFAIQRKREDRDVTAIM 135 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQ 178 L +++ LYP E+ + E + I+ R +L +EVGFI MH+++A++ N + + Sbjct: 136 LPEMRFLYPNEYDIAVEVVERINHRYQTELGSNEVGFITMHIINAELGEPNSLKSLKIVE 195 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWR-ILEHASINDSDESLQQAVKQNY 237 + +L ++ +S Y +ESL+Y RL+ H+KFL R I + + ++ + K + Sbjct: 196 MTTTILSHLEKSYSNVYDKESLTYHRLMVHIKFLVKRLIYQEETPVENIGFFTETFKHS- 254 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+ A +I I Q+Q I EI++LAI++ R+ Sbjct: 255 -KAYCTALKIKDIIEQQFQLAIQENEIIYLAIHLARI 290 >UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDU2_9FIRM Length = 275 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/274 (29%), Positives = 153/274 (55%), Gaps = 6/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I + +NN+ V D + +E +V+G+GIGF E + S I++ + ++++ R Sbjct: 1 MRIVRKINNSAAVAQDSRGKELIVIGKGIGFPAVPYELTDMSRIDRTF----YDIDPRYF 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++S +P E++ I AQ L L ++ ++L DH FA++RF+ + L P+ + Sbjct: 57 EMISTLPQEILLASADITEDAQVVLNTTLNSNLPLTLADHLNFAVERFRSGLNLTIPIAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 DI+ LYP EF LG +AL I+ + GV LP E IAMHL++A++ + + + ++ Sbjct: 117 DIRHLYPNEFDLGVKALDILKEYTGVSLPDSEAVSIAMHLINAEIENSEIHSLVKALEIQ 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +++ + +L ++S SY R H+++L R++ S+ + + +YP+ Sbjct: 177 EGVESIVEREMNLKLDKDSYSYYRFTMHIRYLIQRLMSGTQSETGSGSMVKMLANDYPKT 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + CA++IA F+ Q + E+++L ++I RV Sbjct: 237 YICAKKIAAFLQKQENWCCNDEELLYLMLHINRV 270 >UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacillaceae RepID=C6VMH3_LACPJ Length = 280 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/276 (30%), Positives = 151/276 (54%), Gaps = 8/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVVV +D E V G+G+GFQK E + + + ++ ++LN + Sbjct: 1 MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKV----TMTFYKLNYQYY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL IP E+ I+ AQ + + L ++ SL DH FAI R P + Sbjct: 57 QLLKEIPTEIFDLSAAIVERAQALIPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS--GNMEDVAGVTQL 179 D+++LYP+E +G A+ +I++RL +QLP EV IAMH V++Q + V ++ Sbjct: 117 DVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQTNDLATNSSVNSDDEM 176 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYP 238 ++ + ++I+ ++ L + +Y R V HL++ R+ +H I+++D S L ++ + P Sbjct: 177 IKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + A+RIA ++ Q + E+ +L I ++R+ Sbjct: 237 EIYLVAKRIADYVDSQLDTNSNDDELFYLMIYVKRI 272 >UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368A3 Length = 278 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 141/252 (55%), Gaps = 6/252 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVV+ +D RE V GRGIGF E + S I++ Y + +N Sbjct: 1 MKVIKKINNNVVICLDHNNRELVAFGRGIGFPAAPYELDDLSKIDRTY----YGVNSSYM 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ IP EV +I+ +A + +L ++ +L DH FAI+R Q+N+ L NP L+ Sbjct: 57 GLVNEIPEEVFEVAAKIVDMAVNYIDCELSSNLVFTLADHINFAIERNQRNMNLRNPFLY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ-LM 180 DI+ Y KE +G A+ +I + L V LP++E G IA+H ++A+ E+ V+ ++ Sbjct: 117 DIRYFYEKEMDIGNLAVKMIRRYLKVSLPEEEAGNIALHFINAEALSEKENEFNVSDTVV 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E+ LI+ + ++ + E +Y R V+HL++L R +SI+ + L +K+ +P Sbjct: 177 EEVTYLIEKELNIRIKREDFNYSRFVSHLQYLMKRKDAVSSISSDNIKLYMEMKEEFPVI 236 Query: 241 WQCAERIAIFIG 252 +QC +I ++ Sbjct: 237 YQCVLKIRDYMA 248 >UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTN7_PAESJ Length = 286 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 153/276 (55%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQ-REKVVMGRGIGFQKRAGERINSSG--IEKEYALSSHELNG 59 ++I +I+ NNV++ ++ + RE V+ G+GIGF + + I++ IEK Y L + Sbjct: 7 LRIDRIVGNNVILTMEPKSSREYVLFGKGIGFSCKGQKFIDAEDPRIEKRYRLDDRDKAL 66 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNP 118 LL + EV+ ++II +ERLG D +Y +L H QF + R + + + NP Sbjct: 67 HYHSLLEELDPEVVQISEQIIDEIRERLGTPVDPKVYFALPSHIQFVVYRLRNGMEIVNP 126 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L++ + YP+EF++ +A +I ++ + +P+DEVGF+ H+ SA S + +T+ Sbjct: 127 FLYETKMCYPQEFKIAAKAAKMISEKFDITIPEDEVGFLTYHVYSAAGSVTAGQMVQLTE 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 LM E+++ I+ ++S Y RL+ HL+++ RIL++ +++ +K P Sbjct: 187 LMNEIVERIEGWREAPLSKKSSDYARLIMHLRYMMERILQN---KETENPFSAEIKDKIP 243 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Q AE IA IG + K+S EI +LA+++ R+ Sbjct: 244 TEHQKAELIAQMIGERLNVKVSSDEIGYLAMHLYRL 279 >UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=Paenibacillaceae RepID=C0ZH78_BREBN Length = 285 Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 83/274 (30%), Positives = 152/274 (55%), Gaps = 7/274 (2%) Query: 5 ITKILNNNVVVVIDDQQREKVVM-GRGIGFQKRAGERINSSG--IEKEYALSSHELNGRL 61 IT++LN+NVV+V + +++V+ G+GIGF + G I + +EK + L + + Sbjct: 11 ITRVLNHNVVLVEEPGSGQEIVLFGKGIGFGAKPGNTIPAHDLRVEKRFRLENESHQKQY 70 Query: 62 SELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LS + V+ + II+L A E +L + ++++L DH QFAI R + + NP L Sbjct: 71 QNILSQVDPAVVGIAEEIIALIASEITPELNEHVHVALPDHIQFAIYRLNNGMEIVNPFL 130 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++IQ LY KE+ L A +I + +P E+GF+A+H+ SA ++ T ++ Sbjct: 131 FEIQTLYTKEYALANRAADMIKNAFDLDIPDSEIGFLALHIHSAISYVPVKKAVQFTNII 190 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E++ LI+ Q ++ + ++ Y RL+THL+F RI + I + L VK P+A Sbjct: 191 TELVSLIEEQTAITIERSTIDYVRLITHLRFAVERIRQQKFIKN---PLLDRVKTTMPEA 247 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +Q A +A +I + + + E+ ++A+++ R+ Sbjct: 248 YQLATELAQYISTRLEIAVPEDEVGYMALHLYRL 281 >UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLN3_CLOCL Length = 280 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 153/277 (55%), Gaps = 12/277 (4%) Query: 5 ITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAG-ERINSSGIEKEYALSSHELNGRLS 62 + K NNNV++ D D+ +E V++GRGIGF G E + IE+ Y + E +L+ Sbjct: 6 VIKPFNNNVILGFDRDKDKECVMVGRGIGFSVVKGQEFYDREKIERIYYIEDDENKAKLN 65 Query: 63 ELLSHIPLEVMATCDRIIS----LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 L ++ ++ + IS + + LGK+ I+I+L DH F I+R + + + NP Sbjct: 66 SLYRNVDSSLIGATEEAISYISKVTESDLGKI---IHITLLDHLAFTIERIKNGIKIGNP 122 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L++ + LY KEF + E+ L II+ R+ ++LPK EVGFIAMH+ +A + VA Sbjct: 123 FLYETKVLYEKEFSIAEDVLEIINDRMNLELPKAEVGFIAMHIHAALNNQKSSSVATNAY 182 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++EM+ +I+ ++ ES+SY RL+THL+F RI + I + L ++K Sbjct: 183 IIQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPI---ENILLDSIKTQLK 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ A +A ++ + + EI ++A++I ++ Sbjct: 240 DSYMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIK 276 >UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI7_LACPL Length = 277 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 156/274 (56%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I K+LN++VV+V D+ +E +++G+GIG+ K+ G I + + S +L Sbjct: 2 LRIKKVLNSSVVLVTDEHDQEFILLGKGIGYGKKPGAVIMDGDFNQVFVASPDPNVEQLL 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +++ I+S A E+L KL D++Y++L DH +F ++R + +++ N + W Sbjct: 62 ATIASSSPQLIEITQTIVSEATEQLQSKLSDTLYVALLDHLKFTLERAAKGIVITNRVYW 121 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+ Y EF++G+ A+ ++++ + E IA H+++A+ + +D QL+ Sbjct: 122 EIKTYYSHEFEIGQLAVRLVNRAFKTDFSEQEAANIAAHIINAENGTDERKDALKAGQLI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ ++K+Q E L+YQR V H+KFL R + ++D+D ++ VK +A Sbjct: 182 GRIINIVKYQTGGIVNEHDLNYQRCVVHVKFLVERAIAGELLDDADPAMVAIVKSQNSRA 241 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++A ++ ++++ + E+M +A+ I+R+ Sbjct: 242 FAIAGKVAAYMSMKFKMPLPDEEVMLMAMQIQRL 275 >UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lactobacillus RepID=LACT_LACCA Length = 292 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 164/290 (56%), Gaps = 28/290 (9%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I +I NNNV +V D + + VV GRGI FQKR G+ I + IEK + L++ L Sbjct: 3 KIAQIFNNNVALVDLDNRGQAVVRGRGIAFQKRRGDVIPTKQIEKIFYLANETSRQNLYF 62 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQ----QNVLLPNP 118 LL +IP++V+ T II +AQ++ K+ D IYI+L+DH A KR+Q Q ++P+ Sbjct: 63 LLKNIPIDVVTTTYEIIDVAQKQYRLKVLDYIYITLSDHIYEAYKRYQAGTYQETMVPD- 121 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG--- 175 + IQ YP E+ + ++AL II LGVQ P+ E+ +A+H ++A + E V G Sbjct: 122 --FHIQ--YPAEYAVAKQALQIIATNLGVQFPQSEIKNLALHFINASGEDDGEQVFGKSN 177 Query: 176 ---VTQLMREMLQ---LIKFQFSLNYQEESLSYQRLVTHLKFLSWRI--LEHASINDSDE 227 ++QL++E+L+ + + + NY Y R + HL++L R+ ++ ++ E Sbjct: 178 EASLSQLVQEVLKRHHITRSHSNGNY------YDRFMIHLQYLIDRLQRVDTYAVTIVPE 231 Query: 228 SLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + +KQNYPQ+++ A I I Q R +S E ++ I+I+R+ E Sbjct: 232 -VATELKQNYPQSYKIASEIFDEIKDQLYRSMSEDERLYFIIHIQRLINE 280 >UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Enterobacter sp. 638 RepID=A4WFZ1_ENT38 Length = 278 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 153/275 (55%), Gaps = 6/275 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + I K LNN++++V D+ +RE ++ G+GIGF +AG +I+ + +EK + S + Sbjct: 2 ITIKKSLNNSMLLV-DNDRREMILFGKGIGFGAKAGSQIDLTQVEKVFLPLSDLKSRHFL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L IP I++LA+ G KL + +L +H FA++R + ++ N L W Sbjct: 61 SLTDTIPAAFFEISHEILTLARTLCGDKLNSVLLFTLAEHLHFAVERSRSGQVILNKLSW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ--L 179 +++R YP+E+ +G +A ++ + GV LP+DE IA HL++A SG +D + Q L Sbjct: 121 EVKRYYPQEYSVGMQARANVNAQFGVDLPEDEAVNIAFHLINA--SGQTDDSSAHQQVEL 178 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + ++++++ S +S++Y R +THL++ + R+L + E Q + ++ P Sbjct: 179 VNRIAEIVRYKLSKAIDTQSVNYMRFITHLRYFAERVLTGKIVVSETEDFYQELMRHRPD 238 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A A I ++ +YQ + E+ +L+I+I R+ Sbjct: 239 AMTVAWVIRDYVQEKYQLTLPKDELTWLSIHISRL 273 >UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6P9_THEAS Length = 285 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 78/276 (28%), Positives = 148/276 (53%), Gaps = 4/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++++K+LNNNVV+ E V++GRGIGF ++ G+ + S EK + L + R + Sbjct: 2 LRVSKVLNNNVVIASHASGWETVLVGRGIGFGRKVGDPVEESWAEKVFVLKDPKERLRYA 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L+ I A + I++ ++ LG L + I+ SLTDH FA+KR ++ + + NP Sbjct: 62 KVLAEIDGSFAALVAQGIAIMEDHLGVPLGERIHASLTDHLFFAVKRLREGIAVRNPFAR 121 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 ++ +YPKE + L + + + + +P DE F+A+H+ SA ++ VA +++ Sbjct: 122 EVAAMYPKEHAASQAMLRWLSEEVHLDMPDDEAAFVALHVHSAMGGEDLGRVAWKNRVIS 181 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI---LEHASINDSDESLQQAVKQNYP 238 E++ + + S Y R + HL F R+ +E D +L++ +K+ P Sbjct: 182 ELVAITEESLGFRLDRLSPHYMRFIRHLSFSIDRVEGGIEGDLEGDPISTLEETMKRENP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++ +++ R I PAE+++L I+I R+ Sbjct: 242 VPYGIALKLCLYMRNALDRPIPPAEVVYLTIHIHRL 277 >UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 Tax=Enterococcus RepID=C2HEQ1_ENTFC Length = 310 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/281 (32%), Positives = 161/281 (57%), Gaps = 15/281 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI N N V+V DD +EKV +G+GIGF ++ + I IE+ + + E +L Sbjct: 21 MKIKKIFNQNAVLV-DDGGQEKVAIGKGIGFDRKRNDLIFDRDIERIFVMEP-EGQIKLQ 78 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ I + + II A+ L KL + + I+LTDH F+ + +++ N LL Sbjct: 79 NLLNQIDERFLFAAETIIDHAETVLMEKLNEHVLIALTDHIAFSAENINNGIVIRNKLLR 138 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM--SGNMEDVAGVTQL 179 +I+ LY EF + + A+ + K LG+ DE G+IA+H+ S + + N + VT + Sbjct: 139 EIEVLYSDEFSIAQWAVEYLTKELGIPYTYDEAGYIAIHIHSGRSGRNNNHRSIREVT-I 197 Query: 180 MREMLQLIKFQFSLNYQEE--SLSYQRLVTHLKFLSWRILEHA---SINDSDESLQQAVK 234 + +++ L++ + + E SL+Y RLV HL+ L R HA ++ D++ + + VK Sbjct: 198 VSDIIHLVESELETDIHSEPFSLNYSRLVNHLRLLLQRT--HAQQYAVLDTE--IVEMVK 253 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + YP++++ +++I + + +YQ I+ E+ +LAI+IER+R Sbjct: 254 RKYPESYKISKKIRVLLTKEYQLAITKEELGYLAIHIERLR 294 >UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exiguobacterium RepID=B1YKV9_EXIS2 Length = 285 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 148/276 (53%), Gaps = 9/276 (3%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRLS 62 + K+LNNNVV+ +E +++ +GIGF ++ G+++ +EK Y L + + Sbjct: 7 HVIKVLNNNVVICSTGANQEVIILAKGIGFGRKPGDQLTDLDKLEKVYTLKDKDEQAQYK 66 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ H+ +A + I+S+ + R GK + + I+I LTDH F KR +Q + + NP L Sbjct: 67 ALVGHLDENFIALMNEIVSMIETRFGKRVDEHIHIGLTDHLTFTFKRLEQGMEVTNPFLA 126 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT---Q 178 + + LYP+E+ L EE + I + LP E GFIA+H+ SA N +DV V Q Sbjct: 127 ETEALYPEEYALAEEIVEFISAEMNFYLPPAETGFIALHIHSAT---NFKDVLEVNRHHQ 183 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L+ + I+ + + +SL Y+RL+ HL+ R+ + ++ E +++ +++ YP Sbjct: 184 LVGLIASHIEQRLQIKIDRKSLDYKRLIRHLRSAIERV-SNGEYLEAPEKVEKLLREEYP 242 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A + + Q ++ + E +L ++++R+ Sbjct: 243 LCYDTAWELMSIMERQLKKAVPRGEATYLTMHLQRL 278 >UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ73_9FIRM Length = 273 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 150/274 (54%), Gaps = 7/274 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI---EKEYALSSHELNGR 60 ++ K LNNN ++ + ++ RE +++G+GIGF K++GERI S K Y L + + N Sbjct: 3 RVIKPLNNNGLLALTEEGREVILLGKGIGFGKKSGERIESLTCLPQAKVYHLVTDDENSA 62 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L + P + R++ A++ + D I + + DH A++R ++ + LPNPL Sbjct: 63 LQRVNGLDP-HAVELAARVLDEARKSFPAMTDDILLPMADHIAMALERCRRGIRLPNPLQ 121 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI ++P E+++ E+ L I++ G+ LP +E G++++H+ + N D +L Sbjct: 122 HDIMVMFPDEYRIAEQGLHAIEREEGLSLPPEEAGYLSLHIHAGISEQNAGDSLTNIRLA 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + + I+ + ++ + L Y RL++H+ ++ RI + + + V++ YP+A Sbjct: 182 ADCIAKIETELGISLRRTELKYTRLISHVCYMILRIRAQEEV---PLQMDEYVRKMYPRA 238 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +Q AE++ + + IS AE+ LAI+I+RV Sbjct: 239 YQLAEKLCKALEEKLCLPISSAEVTLLAIHIQRV 272 >UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMP9_9FIRM Length = 285 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 4/275 (1%) Query: 4 QITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I+K+LN+N V+ I D +E +VMG+GIGF K+ ERI + Y+L + G Sbjct: 3 RISKVLNHNTVIGIHADDNQEYLVMGKGIGFGKKVSERIEVRDGDTVYSLQATSNRGNAK 62 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 EL + I + + I+ A++ + ++ + DH ++A+KR Q + + NPL D Sbjct: 63 ELATSIQPIYLEIANEILDEAEKVFQNIDRAVLFPMADHLEYAVKRIQNHEQISNPLTDD 122 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ E++ E I+ +RLG+ + +EVG+I++H+ SA N+ + + +RE Sbjct: 123 IRVLFHLEYKTAECVRPILKERLGITIDDNEVGYISLHIHSAIKDENVSLAMQIARAVRE 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + ++ + SLSY RL+ H++ + R L+H + +L ++ +PQA+Q Sbjct: 183 CISHVEQAVNRPIDVMSLSYNRLMNHIRNMVARALQHEELK---LNLNDYMEVKFPQAFQ 239 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A+ I +G +S AE+ +LA++IERV E Sbjct: 240 MAQTICDQVGKNLCCTLSDAEVGYLAMHIERVVHE 274 >UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobacillus RepID=Q041B0_LACGA Length = 292 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 156/279 (55%), Gaps = 12/279 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH--ELNGR 60 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH E+N Sbjct: 13 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFTATSHQDEVNQ- 71 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP- 118 + I + +++I + + L K D Y++L DH FA+ R + ++ + Sbjct: 72 ----VKEINASTIDLTNKVIQMVEPLLNVKFNDFQYLALADHIDFALSRTEDHIDMSAAN 127 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVT 177 W+++ L+PKE+++ E + +I+K + V LP E F+ H V+A + +++ +T Sbjct: 128 TRWEVKNLFPKEYKISERVIALINKEMKVNLPPSESIFMTYHFVNAASDNDQVQETVEIT 187 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQ 235 +L+ ++ +I++Q+ + ES +Y R +THL+ L R+L +H + D+SL +K Sbjct: 188 ELISGIIDIIQYQYQMTLDTESFNYSRFITHLRVLLVRLLRNKHQKSGELDDSLLAFMKI 247 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Y A+ AERIA ++ + ++ + +L ++I RV Sbjct: 248 KYNHAYDTAERIATYLHSKKGWTLNSDDKFYLVLHIWRV 286 >UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B6FR13_9CLOT Length = 293 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 4/272 (1%) Query: 4 QITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++K+LNNN V+ I+ ++ E V++G+GIGF K+ ER + Y+L G Sbjct: 19 RVSKVLNNNGVIAINMEENIEYVLLGKGIGFGKKISERFEAPDGCARYSLREDTERGSAK 78 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 EL I E + + I+ A+E+ G++ I L DH FA++R + + NPL D Sbjct: 79 ELAKSIAPEYLEIANAILVEAEEKFGRIDRRILFPLADHISFAVERIRHGEQISNPLTED 138 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ E+Q+ + I+ +RL V++ E+G++A+H+ SA N+ + + +RE Sbjct: 139 IRALFGSEYQVASKLKEILKERLSVEIDSHEIGYVALHIHSAIEDENVSMAMQMARAVRE 198 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +++++ + SLSY RL+ H+K++ R ++ SI L ++QN+P+A++ Sbjct: 199 CVKILEQETGKQIDVRSLSYNRLMNHVKYMIIRAIKKESIK---LDLNDYMQQNHPEAFR 255 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + I + ++ E+ +LA++IERV Sbjct: 256 LGRLVCQDIEKECAIRLEKMEVGYLAMHIERV 287 >UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Enterobacteriaceae RepID=C6DD15_PECCP Length = 279 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 145/273 (53%), Gaps = 2/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++ K LNN++++V D +Q+E +++G+GIGF R G I+ + +E+ + + + Sbjct: 2 IKVKKALNNSMLLV-DHEQQEMILLGKGIGFGARPGSLIDVTHVEQVFIPLENLKSRHFL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L IP I++LAQ + KL ++ +L +H FA++R + N L W Sbjct: 61 SLTDTIPAAFFDITHEIVTLAQSQYAEKLNSVLFFTLAEHLYFAVERSKTGNHFVNKLSW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y KE+ +G +A + R V LP DE IA HL++A S + D QL+ Sbjct: 121 EVKRYYQKEYAIGVQAKDRVSARFNVMLPDDEAVNIAFHLINAAGSAEIADAHQQVQLVN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 + ++++++ + N ++ Y R +THL++ S R++ + Q + ++YP+A Sbjct: 181 RLAEIVRYKLNKNIDVNAVDYLRFITHLRYFSERVIARKIAPGRTDDFYQELLKHYPEAM 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + I ++ +YQ + E+ +L I+I R+ Sbjct: 241 AISWAIRDYVQEKYQMALPKEELTWLTIHISRL 273 >UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 Tax=Lactobacillus casei group RepID=B3WDA1_LACCB Length = 276 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 151/274 (55%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I K+LN NVV+ D E + G+GIG++++ + + I K++ + Sbjct: 2 FRIKKVLNVNVVLAEQDGH-EYIAFGKGIGYRQKVNACLPDNAIFKKFMPLDDSRKSEMI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + L++IP ++ +I++ A+++L L SIY +LTDH F+++R+ L N + W Sbjct: 61 QSLNNIPPVYISITSQIVTYAEQQLQLSLLPSIYYALTDHLAFSVQRYHSKQSLGNRIYW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 +++ YP+ F +GE LT+++ L + LP++E IA H+++A + ++ VTQL+ Sbjct: 121 EMKPYYPEMFAIGEYGLTVVEATLQLALPREEAANIAFHIINATPAAAGKANILEVTQLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +LQ ++ SL+Y+R VTH+KF + R L + D D L +V YP+A Sbjct: 181 DNVLQAVRALTGGTIDTTSLNYERFVTHMKFFAERYLGDTMLAD-DGQLLTSVYTVYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++ I Y+++ + E+ +L I+I RV Sbjct: 240 AKIALKVQKAIIAIYEKEPTKEELAYLIIHIHRV 273 >UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria RepID=C3RKG1_9MOLU Length = 276 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/277 (29%), Positives = 158/277 (57%), Gaps = 15/277 (5%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGE-RINSSGIEKEYALSSHELNGRLS 62 +I K+LNNN ++ D Q E + +G+GIGF K+ + I G++K Y + + E RL Sbjct: 3 RIEKVLNNNSILASKDNQ-EVIFLGKGIGFGKKINDIYIPGDGVKK-YKMETKEQEKRLP 60 Query: 63 -ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++ ++ + II AQE+ + I + L DH FAIKR Q+NV + NP Sbjct: 61 HEIIRNVDPVFIEIASDIIRFAQEQFDHVDTKILLPLADHIDFAIKRIQENVNMSNPFTK 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+ L+P+E+++ + +I+ G ++ +DEVG+I +H+ SA + ++ + +++ Sbjct: 121 DIELLFPEEYKVALKGKQLINSITGFEITEDEVGYITLHVHSAISTDHVGESMQAMEIIH 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV----KQNY 237 E + ++ + ++ S+SY RL+ H+K+L R+ +++E LQ + ++ + Sbjct: 181 ESIDKLRKELNIGIDRNSISYIRLMNHIKYLLLRL-------NTEEKLQMDISDFTQERF 233 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P A++ ++ I I + +++I +EI +LA+++ER+ Sbjct: 234 PFAYERSKEICIRLSKVMKKEIPQSEIGYLALHLERI 270 >UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4R0_9FIRM Length = 275 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 155/276 (56%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +I NNNV++ ++ E +++GRGI F G ++ IEK++ L ++ + Sbjct: 1 MIIKQIYNNNVILSENEAGDEIILVGRGIAFGMTRGSKVVEGRIEKKFELQD-DVGQKFK 59 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + + + II + + ++ DSIY++LTDH I+R + ++ LL Sbjct: 60 TLVQDVPYKTILVSEEIIDYIKTQSTKRINDSIYVTLTDHIANMIERIKMGIVFDPTLLL 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ LY +E++LG + ++ ++L + + E FIA+H+++A++ NM+ + +T ++ Sbjct: 120 NVKSLYKEEYRLGLKVTELLRQKLKIDIDDGEASFIALHIINAELDSNMQQMYEITAVIE 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAVKQNYP 238 E+L L++ F ++ E+ R +TH +F + R++ + ++ D + S Q +Q +P Sbjct: 180 EILNLVREDFQID--TENGQCDRFITHCRFFAQRVVNNEYLSTKFDYNLSTYQVFEQTHP 237 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C ERIA I +Y +S E +++ I++ R+ Sbjct: 238 RETACIERIAQRIKDRYGYTVSTDEKLYIMIHLIRL 273 >UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV3_9FIRM Length = 277 Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 151/276 (54%), Gaps = 13/276 (4%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYAL-SSHELNGRLS 62 +I KILN+N ++V+ + + E +VM +GIGF K+ GE + K+Y + S++ + + Sbjct: 3 EILKILNHNTILVLKENE-EIIVMSKGIGFGKKQGENVEIPRNAKQYKMQKSYQAKQKSN 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 + +I + II+L +E+ GK++ I +SL DH FA+KR ++ NP D Sbjct: 62 NIFDYIDPMYIEISSEIITLTKEKFGKVEHDILLSLADHIYFAVKRIKEKDFPSNPFNMD 121 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 IQ ++P E+ + +A +I+K ++ +E+ FI +H+ SA + D V +++RE Sbjct: 122 IQLMFPDEYSVALKAKDVIEKYTHEEINAEEIAFITLHIHSAISVNKVGDSMEVMRVIRE 181 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV----KQNYP 238 ++ ++ SLSY RL+ H+KFL R+ ++DE LQ + K+ +P Sbjct: 182 FFMKLQADLNIRIDANSLSYIRLMNHIKFLLLRL-------NNDEELQMDITEFTKEKFP 234 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ A + + + + +E+ +LA+++ER+ Sbjct: 235 FAYEQARVLCEQLSHVLHKDLPDSELGYLALHLERI 270 >UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C005_LISGR Length = 301 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 163/277 (58%), Gaps = 6/277 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM + K +NNNV++ ++ +E +V G+GIGF+ + ++ + +E+ + + ++ Sbjct: 22 NMIVKKRINNNVILA-EENAKEMIVTGKGIGFRAYPKDEVDQTKVEQLFLPTGKWDTMQI 80 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL + + + II + ++ L K+Q + +SL DH FA++R ++ + + +P+ Sbjct: 81 AALLKDTDIADIQLAEAIILIGEKLLQQKIQRTSMLSLLDHIIFALERSKEKIAMKSPIE 140 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM--SGNMEDVAGVTQ 178 W+++ YP+E ++GE+A+ +I++ GV+LP+ E FIA+H V Q+ S M ++ + Sbjct: 141 WEVKHFYPQEMKIGEQAVELINRIKGVKLPESEQIFIALHFVHYQIDSSATMPEMMTYLE 200 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLK-FLSWRILEHASINDSDESLQQAVKQNY 237 +R++ Q+IKF+F + E+S+ +QR + HLK +L R E + L + +K++Y Sbjct: 201 TIRDITQMIKFEFQMEIDEDSVYFQRFLHHLKCYLLIRKGEEQK-RFIRQPLARLIKEDY 259 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++CA +I ++ +Y S E ++L +++ R+ Sbjct: 260 QREFKCARKIDCYLTEKYGVAPSSDEQVYLTLHLARL 296 >UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A6BJ08_9FIRM Length = 281 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 8/277 (2%) Query: 1 MNMQITKILNNNVVVVI-DDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 M +I K+LN+N V+ I D +E ++MG+G+GF ++ ERI ++ Y+L ++ G Sbjct: 1 MMYRIEKVLNHNTVMAIHQDDHKEVLIMGKGVGFGRKVAERIEVRPEDRLYSLQKYKERG 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 E++ I E + + ++ A++ GK+ + L DH FA+KR Q + + NPL Sbjct: 61 GAKEIVKSIAPEFLEVTNAVLDEAEKIFGKIDRMVLFPLADHIAFAVKRIQNHEQISNPL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 DI+ L+ EF+ E ++ K+ G+ + DEVG++A+H+ SA + + + Sbjct: 121 TEDIRVLFHMEFKAAESIRPLLQKQFGIDIEDDEVGYVALHIHSAIEDEKVSQAMQMARS 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 +RE + +++ SLSY RL+ H++++ R L E +N +D ++ + Sbjct: 181 VRECISMVEEAIGKPIDIASLSYNRLMNHIRYMVARALSGEKLKVNMND-----YMEVKF 235 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+++ A+ + +G K+ E +LA++IERV Sbjct: 236 PKSFGMAQAVCDQVGESLGVKLEEVETGYLAMHIERV 272 >UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4223B Length = 278 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 127/207 (61%), Gaps = 1/207 (0%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I K++NNNVV+ + E +++G+GIGF ++ G+ I + I+K + L E + E Sbjct: 6 RIEKVVNNNVVIAQSPELNEVILIGKGIGFGRKKGQHIQADAIDKLFVLKDKEEQKQYRE 65 Query: 64 LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LLS + ++ + II + Q L K L + I+++LTDH QFAI+R +Q + + NP L + Sbjct: 66 LLSDLDEALIVHINEIIRMIQRELPKPLYERIHLALTDHIQFAIRRLEQGIEISNPFLTE 125 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 + ++P EF L +A+ ++ L V+LP+ E+GF+A+H+ SA + + ++ QL+ E Sbjct: 126 TEMMFPNEFHLARKAVDYLNAHLTVELPEAEIGFVALHIYSASSNQPLSEMNEHPQLISE 185 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHL 209 ++++I + +++ S+ Y RLV+ L Sbjct: 186 LVEIIMEKGNVSLNRRSVEYMRLVSFL 212 >UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2L9_9FIRM Length = 311 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 + +I+NNN+V+ D + E V +G+G+GF+K+ + I+S + K Y L +L L Sbjct: 29 VKRIINNNIVIAEDFKGHEVVAIGKGLGFRKQKYDVIHSREVMKTYVLVDGSARPQLLSL 88 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 +P E++ RII +AQE L ++ ++L DH QF++ +++ +P + ++ Sbjct: 89 FEQVPFEIIELTQRIIDIAQEDLKMTFNVNLVVALADHIQFSVNQYKAGFDMPALVNEEV 148 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 +R Y E+++G++A+ +I++ L +QL ++E IA HL++A D + Q + E+ Sbjct: 149 KRFYKDEYEVGKKAVRLINETLHIQLKREESTSIAFHLITAAEKRPNHDALRIMQGVSEI 208 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ---NYPQA 240 ++L++ L E+S++ R + HLKF IL + S+ SL + Q Y QA Sbjct: 209 IKLVEQTLDLTLDEDSMAVSRFIIHLKFFMRSIL-FEQVRRSEGSLGSMLSQFSTGYEQA 267 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C + I+ ++ Y ++ + ++L I+I R+ Sbjct: 268 SRCVDLISNYVLEHYAYSLTDEDRLYLMIHIVRL 301 >UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bacteria RepID=A6LRF6_CLOB8 Length = 278 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/272 (30%), Positives = 159/272 (58%), Gaps = 4/272 (1%) Query: 4 QITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ K LN+N V+ I+ D +E +++G+GIGF K+ ERI + Y L G Sbjct: 3 RVIKALNHNGVLAINMDNYKEYILLGKGIGFGKKVNERIEAPENAHIYLLQQETERGLTK 62 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 E++++I +++ + II A+++ ++ ++I L DH FA+KR + N + NPL D Sbjct: 63 EIINNIEPQILEIANNIIMEAEKKFHEVDENILCPLADHIAFAVKRIRDNEQISNPLTQD 122 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+P+E+++ + II + G+++ +DE+G+IA+H+ S+ + + V L+R Sbjct: 123 IKALFPEEYEVACKGKDIIKEIEGIEINEDEIGYIALHIHSSLGNEKVSQAMQVAMLVRS 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + I+ ESLSY RL+ H+K+++ R+L+ +I + + + +P++++ Sbjct: 183 CITSIEESTGKTIDIESLSYNRLMNHIKYMAARMLKGETIK---LDMNDYISERFPKSFE 239 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 AE I + +G + ++KI EI +LA++IERV Sbjct: 240 IAEDICMKLGKELKKKIKSVEIGYLAMHIERV 271 >UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C346E1 Length = 275 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/276 (30%), Positives = 156/276 (56%), Gaps = 14/276 (5%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSG----IEKEYALSSHELNGR 60 I K++NNNV++V +D Q+E V++G+GIGF +AG+ + + K + H Sbjct: 4 IKKVINNNVILVDNDAQQEFVIIGKGIGFNSKAGQNYHCTEGDELFSKPHDYDIHNFVDN 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + + + LEV+ C I++ KL DS+ I+L++H FAI+R + + + L Sbjct: 64 IPIGIIKLTLEVINKCKPILN------AKLSDSLVITLSEHITFAIERSKNREM--SISL 115 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 +++ LY EF G+ A+ I+++LGV LP E IA+H V+A+++ ++ D TQ Sbjct: 116 YEVPYLYHLEFIAGKVAVDYINEKLGVNLPPGEASLIALHFVNAKLNNKSVGDTLKFTQT 175 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI-LEHASINDSDESLQQAVKQNYP 238 + +++ +I + F + ++ S+ R + HLK+L R H + + L++ V++ Sbjct: 176 VYKIVNIINYSFHIQVNTDADSFSRFINHLKYLLIRCQTNHDKSSQFNSVLEELVEKELL 235 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + CA++IA I +Y +S EI++LA++IER+ Sbjct: 236 KNFACAKKIAALIQSEYTIPVSREEIIYLALHIERL 271 >UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacillus plantarum RepID=C6VMT2_LACPJ Length = 220 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 127/218 (58%), Gaps = 5/218 (2%) Query: 65 LSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 ++ I E +II LA+++L + ISLTDH FA+ R + + N +LW+ Sbjct: 1 MADIEPEYFEVASQIIELAEQQLQTTFNVYLLISLTDHIHFAVYRHHHQMDIHNEILWET 60 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMRE 182 +R+Y +EFQ+G +AL +I K V L +DE GFIAM V M+ N + +T+L+ + Sbjct: 61 KRIYHREFQVGMQALALIKKHFDVTLLEDEAGFIAMKFVENSMADSNTDQTLAMTKLIND 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL---EHASINDSDESLQQAVKQNYPQ 239 +L ++K+Q SL +ES+S QR + HL+F + R+ S D+ L + + + YP+ Sbjct: 121 ILNIVKYQLSLTMPDESVSLQRFLVHLRFFAERLTLKRPDQSQGADDDFLFEHLSKQYPR 180 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A+ C ++IA+F+ ++ +S E ++L ++I+R+ E Sbjct: 181 AFACVQKIAVFVKKSTEQTVSVNERIYLIMHIQRMLNE 218 >UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9B2H8_ENTCA Length = 280 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/272 (29%), Positives = 148/272 (54%), Gaps = 4/272 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I K+LN NV++V D ++ + G+GIG++++ G+ I+ I K Y L Sbjct: 4 IKKVLNVNVIIVEKDN-KDVIAFGKGIGYRQKKGQLISEEKISKFYLPIEDNRMESLITF 62 Query: 65 LSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 ++++P++ + +I A++ L +L + SLTDH F ++R + NV++ + + W+ Sbjct: 63 MNNVPVKYIELAYEVIQEAEKYLDTELSANTLFSLTDHIYFTVERIRDNVIMTSSMYWEF 122 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLMRE 182 +R YP+EFQ ++ + II+K LG+ L + E I H+++ S + +T+++ Sbjct: 123 KRFYPEEFQAAQKGVAIIEKALGISLNEQEAANITFHIINGNSRSAIHANAIQITKIVTN 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L+ ++ SL Y+RLVTH KF + R L + +N+ D L + V Y + Sbjct: 183 ILKSVQMLVKKKLDSHSLHYERLVTHAKFFAERYLTNTMLNN-DAVLIKTVSTLYQEPMA 241 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++RI + Y++ I+ EI +LAI+I R+ Sbjct: 242 YSQRIKRTLEEIYEKPITEEEIAYLAIHINRL 273 >UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A723_ENTCA Length = 280 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 150/271 (55%), Gaps = 3/271 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNNVV+ +D+ E ++MG+GIGFQ + G+ I + IEK+Y +S Sbjct: 1 MKIIKRINNNVVLSKEDEV-EVILMGKGIGFQTKPGDPIPAERIEKKYYPEDDLTVEHMS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++++ + MA I+ L ++ +G ++Y +L DH FAI R +Q ++L NP+ W Sbjct: 60 KVMTKADEKQMAVIYEIVRLFRDSVGTDFNPNVYFTLMDHILFAISRQKQEIVLTNPMHW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV-TQLM 180 +I+++Y KE+ + +A+ +I K L ++E FI +H V+AQ+ + A T+L Sbjct: 120 EIKKIYAKEYAVSVQAVELIRKELYPDFSQEEAAFITLHFVNAQIEKSANQSAYEHTELT 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L+++K+ ++ + E S +QR VTH+++ R + + +YP+ Sbjct: 180 NNILRIVKYSMNIEFDENSSYFQRFVTHIRYYLIRQSQEKEEPVLANPMIALAFSSYPKE 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + A+ I ++ Q ++ E+M+L ++I Sbjct: 240 KETADSIKEYLFEQKGWHVNDMELMYLILHI 270 >UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1K5_9CLOT Length = 273 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 153/274 (55%), Gaps = 10/274 (3%) Query: 4 QITKILNNNVVVVIDDQQREKVVM-GRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ K+LNNN V+ +D +++++V++ G G+GF K+ G+R S + Y L E + L Sbjct: 3 RVIKVLNNNGVLALDMEKKQEVILLGNGVGFGKKMGQRFGGSPDARRYELVKKETSA-LQ 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 + P+ + T RII A+ LG ++ I I++ DH A+ R ++ LPNP D Sbjct: 62 AVNGIDPVYIEVTA-RIIEAAEGLLGPIRHDILIAMADHIALAVSRAKEGCELPNPFSQD 120 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ +E++ + +I + LGV++ +DEV +I +H+ N+ + +L+++ Sbjct: 121 IRALFSQEYEAALKGRELIRQELGVEISEDEVSYITLHIHGGLSDENVSQSLELARLVQD 180 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNYPQA 240 ++ ++ + SL Y RL++HL+++ R E ++N D + ++N+P+A Sbjct: 181 GIRQVEEGMGMTLPAASLGYNRLMSHLRYMIARTRKKEQTNLNMGDYA-----RENFPRA 235 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++ A ++ IG + + ++ EI FLAI+I+R Sbjct: 236 YEVAAQVCEDIGRKLKCPVAQEEIGFLAIHIQRA 269 >UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y734_9FIRM Length = 303 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 147/274 (53%), Gaps = 3/274 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 ITK++NNNVV D RE +V G+ +GF K+ GE I++S I K + S + L L Sbjct: 17 ITKLINNNVVFSTDAGGREIIVFGKAVGFGKKRGEGIDNSKIIKVFEPSDTKEKNFLMNL 76 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 + I + +II+L + RL K+ + ISL+DH A++ Q+ +P +L ++ Sbjct: 77 VEDIDPVYIDITTKIIALFESRLHCKVNVMMNISLSDHIHNAVRNKQEGFQVPLDILEEV 136 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE- 182 + +YP+EF + +E L +I+K L +DE G+I +H ++AQ D A + L +E Sbjct: 137 KTMYPREFLIAKEGLDLIEKETRTTLSEDEAGYIVLHYINAQGQHFRSD-AKIRLLFQEH 195 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++Q I+ + + S+ Y R +THL FL+ R+ + + S +L + Q YP+ Sbjct: 196 VIQKIEQVYDVKLDHLSVYYSRFLTHLSFLAARLHDGQLLEASQSTLYPLLVQKYPRLEA 255 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E IA I ++ + E +LA++I + K Sbjct: 256 CTEMIAEIILNEFHMPVGEEEKGYLALHIHNLLK 289 >UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Corynebacterium glutamicum RepID=Q8GGK1_CORGL Length = 289 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 82/286 (28%), Positives = 157/286 (54%), Gaps = 14/286 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ ++LNNNVV+ I D E V+ G G+GFQK+ GE ++ S + + + ++ ++ Sbjct: 1 MKVLRVLNNNVVLAIKDGA-EVVLTGWGVGFQKKPGEDVDQSKVTQVFVPENNRDADHMA 59 Query: 63 ELLSHIPLEVMA-TCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLL---PNP 118 LL+ +PLE + + + I S++ E + + ++L DH Q A+KR L PNP Sbjct: 60 SLLAEVPLEYLDLSTELIASVSAELDSPVGSATVVALADHLQMAVKRNGLEPELTSKPNP 119 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQ----LPKDEVGFIAMHLVSAQMSGNMEDVA 174 L ++ LYP+E +L E L + L + LP EV I++HLV+A ED+A Sbjct: 120 LSAEVHHLYPEETRLATEILERTNNWLAEKGTPPLPPAEVVAISLHLVNAGF--RTEDLA 177 Query: 175 G---VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 +T + ++ ++I F + +S++ R +TH+++ R+ +ND L+ Sbjct: 178 ETYVMTGVFEQLFEVIDSSFGITLDRQSVNAARFITHMRYFFVRVHHDGQLNDGMSVLRN 237 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ ++P + CAER++ + L+ ++S E +LA+++ R+ ++ Sbjct: 238 SLEISHPDSVACAERLSQILSLRLGAELSSDEQTYLALHVARLAED 283 >UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4QHA6_CORGB Length = 293 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 150/284 (52%), Gaps = 12/284 (4%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I ++ NNNVV+ + R V++GRG+GF + G + + +++ + S+ + +L+ Sbjct: 8 KIIQVFNNNVVLAENGSDR-AVLLGRGLGFGRAPGAAVQADAVQEYFHPSAIQPPEQLAR 66 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L++ + E+++ + A+ + DS +++ DH +FAI R Q + LPNPL W+ Sbjct: 67 LIAELNPEIISLARELAETAEFMCDVTILDSTVVAMADHIRFAIDRAAQGISLPNPLRWE 126 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-----MEDVAGVT 177 + + YP+EF G +AL I V LP++E +A+H+V+AQ + N M A +T Sbjct: 127 VSQFYPREFAFGRKALAHIKSTTRVSLPEEEAVSLALHVVNAQFAQNTRQDSMARTAQLT 186 Query: 178 QLMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE----SLQQA 232 L+ ++ +++ +S++ R +THL+FL R++ E SL Sbjct: 187 TLLTKVFDVVEAALPDQQIDRDSMTAARFITHLRFLLQRLIGREGKAHEAEKGLISLSSK 246 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 V YP ++ A ++ + + L+ S E ++LA++I R+ K Sbjct: 247 VADEYPVSFSIAGKVIMMLQLELDTTCSEDEAVYLALHIARLMK 290 >UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP25_9FIRM Length = 239 Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 133/238 (55%), Gaps = 8/238 (3%) Query: 12 NVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLE 71 NV + D + RE +V G+GIGF E + S +++ + ++++ + +LL +P E Sbjct: 6 NVALAQDAKGREMIVFGKGIGFPATPYELADLSAVQRTF----YDVDEKYFDLLRDVPQE 61 Query: 72 VMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 V D I A++ L L ++ L DH FAI+R ++ V L PL +DI+ LYP+E Sbjct: 62 VFLAADDIAENARDELNCPLNPNLTYVLADHLNFAIQRCREGVALQTPLAYDIRHLYPQE 121 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKF 189 ++L AL + ++L V LP++E IA+H+++A+ G+M T+++ E+ L++ Sbjct: 122 YELAHTALKALREQLQVDLPENEAISIALHIITAEAEVGDMHATMLTTKVISEISDLVEE 181 Query: 190 QFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQQAVKQNYPQAWQCAE 245 + ++S SY R H+++L R++E ++N D +++ + + + YP + C E Sbjct: 182 HLQIRLDKDSFSYSRFAMHMRYLVQRMMEGKALNGDDGMQAMLRTMHREYPDVYACVE 239 >UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFW3_9FIRM Length = 293 Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 146/276 (52%), Gaps = 14/276 (5%) Query: 7 KILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLS 66 K++NNN+V+V D RE + +G+G+GF+K + + I K Y + N L+ L Sbjct: 13 KVVNNNIVIVKDSNGREMIAIGKGLGFKKSKNDIVYPEEIMKTYIYLDRQKNLNLT-LFE 71 Query: 67 HIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQR 125 +P EV+ II A + L K ++ +SL+DH F++K+F++ +I+R Sbjct: 72 EVPFEVIEVSQHIIDYAAKTLNQKYNVNLLVSLSDHIDFSVKQFREGNNTSKLFNEEIKR 131 Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL-VSAQMSGNMED---VAGVTQLMR 181 Y E+Q+G+ A+ I++ L V LPKDE IA HL V++Q N+E + GV ++ Sbjct: 132 FYEDEYQVGKCAIQYINETLHVDLPKDEATSIAFHLIVASQEKTNIETRELLEGVNSIVN 191 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ---QAVKQNYP 238 ++ + Q E+SL+Y R + HLKF RI+ H + N S E Q V + Y Sbjct: 192 ITMKYLGNQID----EDSLAYSRYIIHLKFFLSRIVSHQTSNGSIEVTNIFGQLVTK-YE 246 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C I+ FI ++ + + + ++L I+I R+ Sbjct: 247 GVDRCIHEISEFINGKFNYRCTDEDCIYLMIHIVRL 282 >UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6K4_BIFBR Length = 297 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 158/280 (56%), Gaps = 14/280 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D+ RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLA-KDRGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-----KLQDSIYISLTDHCQFAIKRFQQNVL-LP 116 +LL IP E++ R+IS + +G ++ ++L DH A++R + + +P Sbjct: 60 QLLGDIPPEII----RLISETMDEIGLSSEAAQSSTLVMALADHVCGALRRAKNGIPPVP 115 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL-PKDEVGFIAMHLVSAQMS-GNMEDVA 174 PL +I+ LY +E+Q G L +++RL L P + V F A+H V+A S G++ Sbjct: 116 YPLNSEIRSLYKREYQQGCALLAALNRRLDDALDPSESVAF-ALHFVNAGFSTGDLSPTY 174 Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 +T +++++L +I+ +++ E S++ R +THL++L RI +H ++ E++ ++ Sbjct: 175 MMTGVIQQLLAVIESTYNIKLDEHSVNVGRFITHLRYLFVRIHQHEQLSREPEAIVSSIM 234 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +Y +A +CA IA I L+ ++ E+ +L +++ RV Sbjct: 235 SSYAKASKCARLIASLIELRLDTTLTEDEVAYLTLHVARV 274 >UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178876C Length = 295 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 147/274 (53%), Gaps = 6/274 (2%) Query: 5 ITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERINSSG--IEKEYALSSHELNGRL 61 + +++ NNVV+V ++ E V++G+GIGF + G I S IEK + L E + Sbjct: 9 VVRVIGNNVVMVTGGKKESEYVILGKGIGFGAKIGGTIASDDKRIEKLFRLEDREQWSQA 68 Query: 62 SELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +VM D+I++L QE G L D +Y++L H QF I R ++ + + NP L Sbjct: 69 HHLLEEFDPQVMEITDQILNLIGQEFPGTLNDKVYLALPSHIQFTIYRIRKGMDIINPFL 128 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + +PKE+ + +A +I K +++P+DE+GF+ H+ SA + + + ++ Sbjct: 129 EETRISFPKEYDIAAKAAELIGKTFDIEVPEDEIGFLTYHVYSAVSHVPVGHLVKASNVV 188 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++ I+ + + + S+ Y RL+ HL+F RIL D + ++ + Q Sbjct: 189 GSLVKYIEEERQVAFDRGSMDYVRLLMHLRFSVDRILNQEI--HVDNPFAEQIRSKFTQE 246 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A R++ + + +K+ AE+ FLA+++ R+ Sbjct: 247 YGLATRLSGMMEKELGKKVPEAEVCFLAMHLYRL 280 >UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clostridiales RepID=A4J1C8_DESRM Length = 282 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 153/273 (56%), Gaps = 4/273 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I ++L+NN V+ + ++ +++G+G+GF +++G+ +++ EK Y + + + L Sbjct: 10 IQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKALAL 69 Query: 65 LSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 + + V+ II LA+ +LG+ L ++++L DH F + R Q + + NP L +I Sbjct: 70 MEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLAEI 129 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + +YPKEF + ++ +I +++ + +P +E+GFIA+HL SA+ + ++ +++ Sbjct: 130 EAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSARHNRHVSQSLKHAEVINRA 189 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 ++ I+ QF + L Y RL++HL+ R++ +I + +KQ + +++ Sbjct: 190 VKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTI---ENPFLDKLKQEFSNSYEI 246 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A +++ + + EI +LA++IER+R+ Sbjct: 247 ARQMSNILEEGLGIPVPEDEIGYLAMHIERIRR 279 >UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED34_9ACTN Length = 302 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 151/279 (54%), Gaps = 9/279 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M K LNNN V+ D Q R+ + MGRG+GF + S IE + ++++ + Sbjct: 22 FTMLAIKKLNNNAVLCRDGQGRDVIAMGRGVGFGGDFPRELPLSKIEHTF----YDIDPK 77 Query: 61 LSELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +++ +P +++ +++ + A E L + + + DH FA+ R Q+ V + PL Sbjct: 78 GQDVMRDLPSDIVMFAAKVMDIVANELPYDLSTNATLFMADHLSFAVARAQKGVRIAMPL 137 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ- 178 ++++ YPKE++ + + ++K LG +LPKDE+ IAM+LV+A++ ++ A T+ Sbjct: 138 AYEVRETYPKEYKAAQFIVMRLEKELGERLPKDEIASIAMNLVNARVVEAVKATAEPTKQ 197 Query: 179 ---LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 ++ +++++++ F + +S + R THL++L RI S+N ++ + + ++ Sbjct: 198 FDDMLEDVIEILESDFRIIVDRDSFDFTRFATHLRYLFKRIQAGESLNSANMQMYKNFRE 257 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +PQ +C + I + + +S E ++L I++ R+ Sbjct: 258 EFPQLAECVKHIGSYCRETWDATLSEEEELYLMIHLNRI 296 >UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD06_9FIRM Length = 278 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/277 (30%), Positives = 153/277 (55%), Gaps = 12/277 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKE-YALSSHELNGRL 61 M++ K +NNNV + ID +E + +G+GIGF+ E + SGIE+ YA+ + L Sbjct: 1 MKVIKKINNNVALCIDQGGKELIALGKGIGFKAMPYELQDLSGIERTFYAVKTDTL---- 56 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L I E+ A I+S ++RL K + DS++ L DH FAIKR + ++ ++ Sbjct: 57 -PVLDEIDEELFADTGYIVSQIRQRLKKEISDSLFFVLVDHLNFAIKRARAHIYFQFSIV 115 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV-SAQMSGNMEDVAGVTQL 179 ++ ++Y E Q G+ A+ ++ + GV+LP DE IA+H+V S ++ VT++ Sbjct: 116 SEVVQMYQMEMQAGQWAVDYLNDKYGVKLPSDEAAIIAIHIVGSYDDESYSRELENVTKI 175 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ +I+ + + + +Y R V+HL +L R + +I ++ L +Q +P Sbjct: 176 IGQITDIIEDRMHIQLDRTNFNYSRFVSHLMYLLKRQRDKTAIISTNHQLFDQTRQAFPA 235 Query: 240 AWQCAERIAIFIGLQYQRK--ISPAEIMFLAINIERV 274 +QCA +AI L+ +K IS E+++L ++I R+ Sbjct: 236 VYQCA--LAIRKTLEENQKMIISDEELLYLMLHINRM 270 >UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SK7_SYMTH Length = 275 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/274 (28%), Positives = 149/274 (54%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+ K LNNNV++ D +E VV+GRG+GF+ R + IEK + L R Sbjct: 1 MRPLKALNNNVLLAYDPACGQEVVVVGRGLGFRVSGPIRPDDPRIEKVFRLDESRNRKRF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + +V+ + I++LA R G L + +++L +H + R ++ + +PNP L Sbjct: 61 LRLTETLSGDVIGVAEEILNLAAARFGPLGEEAHLTLAEHLAATVDRVRKGMPIPNPFLA 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 IQ LYP+E+ L +A+ +I RLGV LP++E G +A+HL+ A + + +A L+R Sbjct: 121 QIQLLYPEEYALAGQAVEMIASRLGVTLPEEEQGILALHLLGAWRRESPKVMARHQALIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + + +++ ++ R++ HL+ I+ + +++ L + ++ YP+ + Sbjct: 181 ESAAFLAAEAGISWSDDDPRLSRVLLHLRLAIDLIVSGKA--ETNPVLDR-IRSEYPEEF 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A R+ ++ + +R +S E+ +LA+++ R++ Sbjct: 238 ARARRLGDYMAQRLERPVSDDEVGYLALHLLRLK 271 >UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacillus johnsonii FI9785 RepID=D0R5U6_LACJF Length = 295 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 146/256 (57%), Gaps = 12/256 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH--ELNGR 60 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH E+N Sbjct: 1 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFIANSHQDEVNQ- 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP- 118 + I + +++I + + L K D +++L DH FA+ R + N+ + Sbjct: 60 ----VKEINASTIDLTNKVIQMVEPLLNVKFNDFQHLALADHIDFALSRIEDNIDISAAN 115 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVT 177 + W+++ L+PKE+++ E+ + +I+K + V LP E F+ H V+A + +++ +T Sbjct: 116 IRWEVKNLFPKEYKISEKVIALINKEMKVNLPASESTFMTYHFVNAASDNDQVQETVEIT 175 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQ 235 + + ++ +I++++ ++ ES +Y R +THL+ L R+L +H + D SL +K Sbjct: 176 EFISGIIDIIQYKYQMDLATESFNYSRFITHLRVLLVRLLRNKHHKSGELDGSLLGFMKI 235 Query: 236 NYPQAWQCAERIAIFI 251 Y A+ AE+IA ++ Sbjct: 236 KYNHAYDTAEQIATYL 251 >UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y980_9FIRM Length = 274 Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 145/277 (52%), Gaps = 8/277 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M+I + +NNN + + VV GRGIGF + S +EK Y+ ++ Sbjct: 1 MKMKIIRKINNNYALARKEDGEVVVVAGRGIGFGAIPRYVTDKSQVEKIYS----GVDRN 56 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 E + +P ++ ++I++ A++ L K + +L DH +F I+R QN++ Sbjct: 57 TIEQMGEMPENILKLSEQIVAYAKKHLTKKFSKNFVFTLADHIEFTIERVGQNMIFDFKG 116 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM--SGNMEDVAGVT 177 D + LYP+E ++ A+ I++ L ++LP E+G M++V++++ +GN EDV + Sbjct: 117 YTDFKYLYPREVEISNYAMKKIEEELHIKLPPSELGGFVMNIVNSEVKPAGNDEDV-NFS 175 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 L+ ++ +I+ F L +S +Y R TH+ +L R+ E D + + + + Y Sbjct: 176 PLISQITAIIEKHFKLEINRDSFNYSRFATHMIYLLRRLKEGQKTTDDNRRIYAKLLEEY 235 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P +QC + IA F+ Q K+ E+++L +++ R+ Sbjct: 236 PDTYQCVDEIARFLEENIQSKLDENEMLYLILHVNRL 272 >UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG9_9FIRM Length = 217 Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 125/209 (59%), Gaps = 1/209 (0%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ IP E + I A+E G L ++ ++L DH FAIKR ++N++L NP + Sbjct: 1 MIGAIPPEYFELVEEIFEKAKEEYGFLPKEKETLALLDHIHFAIKRMKENLVLDNPFETE 60 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I++ YPKE+++G A I +R G+++P EVG+IAMH+++++ + V+ +++ Sbjct: 61 IRQFYPKEWEIGLYAKKCIKRRFGIEIPDAEVGYIAMHIIASEFQKSRRTVSKTFEVIDL 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 L+ I+ + + +E+SL+Y RLVTH+K+ + R +++ D DE L Q +K+ + + Sbjct: 121 ALKYIRDNYLTDVKEDSLAYTRLVTHVKYFAQRYVDNKESMDEDELLDQTIKERFQREVC 180 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINI 271 C E ++ + +Y R ++ +E +L +++ Sbjct: 181 CIEGLSEMLYRKYGRPVTVSEENYLVLHL 209 >UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2DZ21_9LACO Length = 277 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 153/277 (55%), Gaps = 8/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V D+ E +V+G+GIGF K+AG+ I S IE+ + + + + Sbjct: 1 MIFEKSYNNSAALVKDEAGVEWIVIGKGIGFGKKAGDIIEESKIERRFKNTDQDTTLKT- 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL- 120 ++ + ++ ++++ L+Q ++G K + Y SL DH F + R ++N++L N ++ Sbjct: 60 --VTSLSSLALSLTNKMVELSQIKIGIKFDNYAYTSLADHVDFMLTRNKENMILDNQMMQ 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W++ +LYPKE + E + +++K V LP+ EV F+ HLV+ +++ +++L Sbjct: 118 WEVVKLYPKEVAVARELVAMVEKEAKVTLPESEVVFLTYHLVNVGFDKETVQETMELSKL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS-INDS-DESLQQAVKQNY 237 + +L+++ + + S +Y R VTHL+ L +I++ ND D Q +KQ Y Sbjct: 178 LDGILRIVSLETGKSLDRTSFNYSRFVTHLRALLIQIIKKQDRKNDGLDPVFGQLMKQKY 237 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ + E+IA FI + ++ + ++L +++ RV Sbjct: 238 PETSKVVEKIAYFIKEKTGYQLGEDDEVYLILHVWRV 274 >UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillales RepID=B7GIF9_ANOFW Length = 281 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 156/274 (56%), Gaps = 2/274 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + +I K+LNNNV++ E V++G+GIGF K+ G+ I +EK + L + + Sbjct: 4 SFRIEKVLNNNVLIASHPTYDEVVLIGKGIGFGKKKGDVIAQKDVEKWFILKNEREQEQY 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL H+ E + + II Q+R L + I+++LTDH FAIKR +Q + + NP L Sbjct: 64 KKLLPHVDEEFIGLMNDIIHHIQKRTNSSLNEHIHVALTDHILFAIKRLEQGMDIKNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LYP E+ + E + ++++RL +QLP+ E+GFIA+H+ SA + + +V +QL+ Sbjct: 124 VETKSLYPLEYDVATEVVNMLNERLRIQLPEGEIGFIALHIHSALTNHQLSEVNQHSQLI 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ +++ Q + ES+ Y R V HL++ R+ + + + + L +K+ YP Sbjct: 184 SRLVSVVEKQLDIRIDRESIHYLRFVRHLRYAIERVKKGEKMEEP-KKLSNILKETYPLC 242 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + ++ + Q + AE ++L ++++R+ Sbjct: 243 YNLSWKLIKIMQQTLQLPVDEAEAVYLTLHLQRL 276 >UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillaceae RepID=A4ILQ1_GEOTN Length = 298 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 157/274 (57%), Gaps = 2/274 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + ++ K LNNNV++ E V++G+GIGF K+ G+ I S +EK + L + + Sbjct: 17 SFRVEKALNNNVLIASHPAYGEVVLLGKGIGFGKKKGDEIAESTVEKCFVLKNEREQEQY 76 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL + E +A + +I ++R+G L + I+++LTDH F +KR +Q + + NP L Sbjct: 77 KKLLPELSEEFIALMNEVIQHIKQRVGVPLNEHIHVALTDHIAFTLKRLEQGLDVKNPFL 136 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LYP E+++ E +I +LGV LP+ EVGFI +H+ SA ++ + +QL+ Sbjct: 137 VETKSLYPLEYEIAAEVAELIGDKLGVALPEGEVGFITLHIHSAISKQSLAEANQYSQLI 196 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++++K Q ++ ES+ Y R V HL++ R+ + + + ++L + +K+ YP Sbjct: 197 AKLVEIVKQQLGVDIDRESIHYLRFVRHLRYAIDRLKKGEKV-EKPKNLSKILKEAYPLC 255 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++ + Q AE ++L ++++R+ Sbjct: 256 YNLAWKLVKVMQQTLQLPADDAEAVYLTLHLQRL 289 >UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XP64_9CORY Length = 287 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 155/286 (54%), Gaps = 17/286 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVV-MGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 MQI ++ NNNVV+ + +VV GRGIGF K+ G+ ++ + + + + + Sbjct: 1 MQILRVFNNNVVLARSGEHGGEVVATGRGIGFGKKQGDVLDPATVTRVFVPAEGRDPDHS 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDS-----IYISLTDHCQFAIKRFQQNVLLP 116 +++L+ +P E +A ++ A E +G DS + +++DH +FA R L Sbjct: 61 AQMLAGLPAERVAQ----VAAALEAVGAPADSRNRLTLVTAISDHIEFAAARAASGEELN 116 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRL----GVQLPKDEVGFIAMHLVSAQMS-GNME 171 PL ++ LYP+++++G E L I++R +LP E +A+HLV+A S G++ Sbjct: 117 YPLRSEVLHLYPRQYEMGVELLAEINRRQRAAGAAELPDSEATALALHLVNAGFSTGDLA 176 Query: 172 DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQ 230 +T ++++ML+++ S+ S+S R +TH+++L R L H D D+S L Sbjct: 177 QTYQMTGVIQQMLEIVAAGLSITLDTASISVARFITHVRYLLVR-LSHGRQLDHDQSPLT 235 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + YP+ CA ++A + L++ ++ +I +L ++I R+R+ Sbjct: 236 RQLLDAYPREVACARQVATVVELRFDCALTEDKIAYLGLHIVRLRE 281 >UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB93_RUMHA Length = 272 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 149/272 (54%), Gaps = 6/272 (2%) Query: 5 ITKILNNNVVVV-IDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRLS 62 I KILNNN ++ + + E++++G+GIGF ++AG+ G + E N ++ Sbjct: 4 ILKILNNNALLAKVKEDDSERILLGKGIGFGRKAGDEFTEIPGASVYTPVVREERNSTMN 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 + + P+ + A +II A++ ++ I + L DH FA KR Q+ + L NP + D Sbjct: 64 VVNTIDPVYIEAA-GKIIEAAEQVFDTIKRDILLPLADHIAFAAKREQEKIFLSNPFVPD 122 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ KE+ + ++ II+K G ++ DE GFIA+H+ S + D TQ++ + Sbjct: 123 IKILFGKEYAVALKSREIIEKMTGYRISDDEAGFIALHIHSGLSDEQVSDTLKTTQIIDD 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + +I+ +++S +Y RL++HL ++ R ++N L ++ YP+A Q Sbjct: 183 CILMIEECLGDKIRQDSCAYIRLMSHLYYMVVRAKTGEAVN---IELNDFIRCKYPKAGQ 239 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +E I +I + ++K+ E+ FLAI+I+R+ Sbjct: 240 ISEVICHYIEKKLEKKLDKEEVGFLAIHIQRI 271 >UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_STAAR Length = 283 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 136/257 (52%), Gaps = 8/257 (3%) Query: 22 REKVVMGRGIGFQKRAGERIN--SSGIEKEYALSSHELNGR---LSELLSHIPLEVMATC 76 +E +++G+GIGF K+ G +N + IEK Y L S + L E+ L+V+ Sbjct: 22 QEVILIGKGIGFNKKEGMTLNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDS 81 Query: 77 DRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEE 136 IS + Q + +SLTDH FA KR +QN ++ NP + + +LY + + ++ Sbjct: 82 LNFISNTAMNVDSKQ--LVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQ 139 Query: 137 ALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQ 196 + ++ L V P+DE+GFIA+H+ S +M ++ + ++++ + +I+ Sbjct: 140 VIDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVD 199 Query: 197 EESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQ 256 +ESL YQR + H++FL R+ I+ D+ + +K +YP + A +I I Q+ Sbjct: 200 KESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFV-SMIKNHYPICYNTAYKILTMIQKQFD 258 Query: 257 RKISPAEIMFLAINIER 273 IS +EI++L ++I Sbjct: 259 VNISESEIIYLTLHIHH 275 >UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphylococcus RepID=GLCT_STACT Length = 287 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 146/275 (53%), Gaps = 8/275 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVM-GRGIGFQKRAG-ERINSSGIEKEYAL---SSHE 56 N I K LNNNV++ D+ Q +VV+ G+GIGF K+ G E +S I+K Y L + Sbjct: 3 NYVIEKTLNNNVIICTDENQHHEVVLIGKGIGFNKKKGMELSDSVMIDKVYKLEQKKDQD 62 Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 L E+ L+ + II+ A + + + ++LTDH FA KR +Q+ + Sbjct: 63 HYKALVEIADDNVLQTIIEAMDIITHADRTV--VDKDLMVALTDHILFAYKRIKQHQFIK 120 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV 176 NP L + ++LY + +Q+ + ++K L ++ P+DE+GFIA+H+ S++ ++ +V Sbjct: 121 NPFLIETKQLYSESYQIAVSVIEHLNKLLDIEFPEDEIGFIALHIASSKDDLSLHEVRLT 180 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 +++ + + +++ S+ YQR + H++FL R L+ I ++ +K + Sbjct: 181 NEIINKSILIMEHDLKYKIDTNSIQYQRFIRHIQFLIRR-LQKGEIIQVNDEFGNMLKAH 239 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 YP + A +I + ++ AE+++L ++I Sbjct: 240 YPLCYNIAVKIIKMMQQHLDVEVYEAELIYLTLHI 274 >UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 Tax=Bacteria RepID=C3RHS5_9MOLU Length = 279 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 146/273 (53%), Gaps = 3/273 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I KILNNN + ++++ E +++G G+GF + + I K Y L ++ L + Sbjct: 7 RINKILNNNAIEILENGT-EIIIIGNGVGFNHKVNDYITMKENYKLYTLQNNLLKIQFKA 65 Query: 64 LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LL+ IP + + II +A+ L + + +SL+DH F K + + + + + Sbjct: 66 LLNEIPFKCIELTQEIIDMAKTDLNRNFNQGLLVSLSDHINFVSKNYLKGYGSYSLVSEE 125 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+R Y +E+++G +AL +I++ + L K E IA HL++A+ + N+ + + + + Sbjct: 126 IKRFYHEEYEVGLKALDLINRYYQINLNKKEASAIAFHLINAEFNNNVSKTTSILKSIDD 185 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L +I+ F L E+SL Y RLV HLKF R+++ S +++ E L + K + + Sbjct: 186 ILNIIEANFGLELPEDSLYYSRLVIHLKFFMQRVIKGESDDENFEKLIISAKSDINKKIG 245 Query: 243 CA-ERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + I ++ ++ +S AE +L ++I R+ Sbjct: 246 ITLDSIERYLNEEFDYVLSEAERFYLLVHISRI 278 >UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ANJ9_SEBTE Length = 281 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 154/278 (55%), Gaps = 7/278 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVV-MGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 MN +I K+ +NNVV+ D ++ +++ +G GIGF+ +AG I+ S IEK Y S E Sbjct: 1 MNFEIIKVFSNNVVLCEDKRKNTEIIAVGCGIGFKAKAGTFISDSAIEKLYGELSEEDKK 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLT--DHCQFAIKRFQQNVLLPN 117 LS+++S+ E++ + + + + L K + SIY LT H FAI+R + ++ N Sbjct: 61 YLSDIMSNTDSEILDIVEDALKIIDKEL-KEKLSIYFHLTMLSHLSFAIERSKYGTIIRN 119 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 P L +++ LYP+E+++ E+ + ++K L +L DEVGFI MH+ +A + + + Sbjct: 120 PFLEELRVLYPQEYRIAEKFIAEVNKHLEYKLEIDEVGFITMHIHAALRGVKVSETSEQL 179 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 L E++++I+ + ES + RL+THLKF R+ + I + L +K+ Sbjct: 180 TLTYELVKVIENELGHKIDRESYDFIRLLTHLKFAVNRVKNNIKIEN---ILLPEIKKKL 236 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ ++++A F Y + E+ ++ I++ +++ Sbjct: 237 KLYYKISQKVAKFAEKNYNILFNEDEVGYITIHLAKIK 274 >UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BY17_LISGR Length = 249 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 136/242 (56%), Gaps = 9/242 (3%) Query: 9 LNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHI 68 LNNN+ +V + E +V+G+GI F K+ G+ I+ + + + + + + ++ E+++ + Sbjct: 10 LNNNIAMV-SQEGEELIVIGKGISFGKKIGDEIDINKVSRVFKAQNELASTQIEEVIAAV 68 Query: 69 PLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 P + ++I +L + + I +SL DH QFA++ QQ + +PL W+++ L+ Sbjct: 69 PEFYLKIAEKIAALGEAATRQQFNFGIILSLADHIQFAVECAQQEYRIKSPLQWEMKTLF 128 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM--EDVAGVTQLMREMLQ 185 P E + G EA+ I+ ++ LP ++ IA+H V+A GN+ ++ ++ ++R+++ Sbjct: 129 PLEVRAGYEAIDYINTQIDADLPSEDAYAIALHFVNAN-KGNLLIKETEKLSLIVRDIID 187 Query: 186 LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVKQNYPQAW 241 LI +++ ES+ Y R VTHLK+ +R+LE + S+ES L Q + +NY Sbjct: 188 LINGFYNIQINRESIDYIRFVTHLKYYLYRMLESRQVGKSEESEIDMLTQLISENYRDTL 247 Query: 242 QC 243 C Sbjct: 248 IC 249 >UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT65_9CLOT Length = 281 Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 150/275 (54%), Gaps = 7/275 (2%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLSE 63 I K LNNN++ I D + EK+ +GRGIGF K+ GE +S ++K + + + + Sbjct: 7 IEKALNNNILQ-IRDGETEKLFIGRGIGFGKKPGELFEKNSVVDKVFVIEDDKNQNNFKQ 65 Query: 64 LLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 + E + C+ +I L A+ +L ++I+ISL DH ++R + + NP L + Sbjct: 66 IFRGDGPEFVDFCEELILLIARSFHEELHETIHISLIDHISCTLRRLKLGEQIVNPFLSE 125 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ LY +EFQ+ E I++R V +P+ EVGFIA+H+ SA+ +G +++ ++ Sbjct: 126 IEALYDQEFQIAGEVCRRIEERYDVSMPEGEVGFIALHIHSARYNGELKNALRSNRICNR 185 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++ L++ + ++S+ R + HL+++ R++ I + L + Y +++ Sbjct: 186 VITLLENEIGRRLDKKSIDCVRFMVHLRYVIERMVRQEKIEN---ELTDVIIFKYKDSYE 242 Query: 243 CAERIAIFIGLQYQRK-ISPAEIMFLAINIERVRK 276 +I + + + + K IS E+ +L +++ER+RK Sbjct: 243 LVLKIKVLLERELKTKNISREELAYLTMHVERLRK 277 >UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium RepID=A0Q2H7_CLONN Length = 279 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 148/275 (53%), Gaps = 8/275 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEY-ALSSHELNGRL 61 +I K+LNNNV++V D + + +++G+GIGF K++GE I SGIE ++ +L ++N L Sbjct: 5 RIIKVLNNNVILV-DSECIQYILVGKGIGFGKKSGEIIKDFSGIESKFISLQGLDINASL 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + +++ ++ I+ + E + L +++++L DH QF +KR + ++L NP L Sbjct: 64 -QFTNNLDPKIAELTKDILKIISEEFSRPLNPNVHVNLIDHIQFTVKRLKSGMILENPFL 122 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LYPKE+ + E+A+ I+ K L + P E+GFI +H+ + +D QL+ Sbjct: 123 TETKLLYPKEYAVAEKAVEILSKGLNMHFPDAEIGFITLHICGGLNEKSKKDALENAQLI 182 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L + + ++ S Y+ V HL+ + RI + + + +L +K+ Sbjct: 183 NTILNFVSKKLNITLDPHSFEYKGFVNHLRGVLNRIKNNKILKN---NLLTELKKRNIIE 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ A ++ I Q + EI ++ I+I ++ Sbjct: 240 YKIAYDVSKIIENVLQISVPEDEIGYITIHIMKLN 274 >UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAU5_9FIRM Length = 273 Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 148/277 (53%), Gaps = 12/277 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K L NN + D+ RE + +G GIGF K + S I++ + + ++ Sbjct: 1 MEVIKKLGNNAAICKDNSGRELIAIGLGIGFPKCPYILEDLSKIDRTF----YNVDKEYL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +I E+ + +I LA L L+ + +L DH FAI+R + ++ P+ Sbjct: 57 NLFEYIDSEIFSIAADVIDLATTMLSVPLKHNAQYTLADHLNFAIERMDKGMIFSTPISN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ----MSGNMEDVAGVT 177 +++ LYP E ++ + L ++ KR + LP++E+ IAM++++++ +SGN V + Sbjct: 117 ELRDLYPVEVKIAKYTLGLMKKRRNIDLPEEEMYAIAMNIINSEENITVSGN---VKLKS 173 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 + +RE++ +I+ Q +++ S +Y R +H+++L R E I+ +++ L + +K Y Sbjct: 174 EFIREVVHVIEAQMNVSIDMHSFNYSRFASHMQYLFRRKNECTEISSANKKLFEVLKNEY 233 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + +QC I I ++ I EI++L +++ R+ Sbjct: 234 TETYQCVLLIKKLIFDKFNWNIGDEEILYLILHVNRL 270 >UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX2_9CLOT Length = 281 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 155/279 (55%), Gaps = 11/279 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ LNNN + ID + +E + +G+GIGF K E + + I + + ++++ + Sbjct: 1 MQVINKLNNNFAICIDGEGKELIAVGKGIGFPKTPYEVEDLNLITRTF----YDIDPKYI 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL IP +V+ +++ +A+ LG ++ ++ ++++DH F+I+R Q+N+ + PL++ Sbjct: 57 ELFKDIPEKVVHFTAKLVEIAKNELGYEMNPNLVVTMSDHIHFSIQRAQKNIDVQMPLIY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAG----- 175 ++++ +P E ++G+ A+ I++R V+L +E IAM+ V+A+ ++ DVA Sbjct: 117 EVEQTFPAEARIGKYAVKQIERRFNVRLDPNEASGIAMNFVNARYDTRLKTDVADQLKKQ 176 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +++ + + +++ + + +S ++ R +HL +L RI + + + + Q++K Sbjct: 177 YQEILEDTISIVEDEIGIVIDRDSFNFARYSSHLMYLLDRIAGNKMLYSDNGIMYQSMKD 236 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +P C E + + + +S E ++L ++I R+ Sbjct: 237 EFPGIAVCVELLERYFKRKCGIILSKEEKLYLILHINRI 275 >UniRef50_D0Z7Y6 Transcriptional antiterminator n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7Y6_EDWTE Length = 178 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 109/173 (63%), Gaps = 4/173 (2%) Query: 1 MNMQITKILNNNVVV----VIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHE 56 M M+I KILNNNVV+ +D +QRE V+MGRG+ F + G+ ++ IEK +AL + Sbjct: 1 MMMRIAKILNNNVVLVLVLALDSRQRELVMMGRGLAFHQCVGDILDEGRIEKIFALQCNR 60 Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 L+ R ++ H+PL+ +ATC+RII GKLQ + +L ++C AI+R ++ ++ Sbjct: 61 LSCRPHNMILHLPLDAIATCERIILSVYTGQGKLQAGLASALAEYCYCAIERHRRGAVIH 120 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 N LL +I YP+EF LG + ++I + + L DEVGFIA+H V A+++ + Sbjct: 121 NALLREIIGRYPREFALGLQVKSLITQYFSLALSHDEVGFIALHFVMARLNSH 173 >UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacteria RepID=C3RPC3_9MOLU Length = 289 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 142/278 (51%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN+ + +D + E +V +GIG+ E + S IE+ + ++++ R Sbjct: 1 MKVIKKINNNIAIAVDGENNEVIVFAKGIGYGNIPYEIKDLSVIERTF----YDVDNRYY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP + +++ +A++ + +L ++ L DH FAI R + + + P + Sbjct: 57 GLLKEIPNNIFNLVTKMVDVAKKNIEDELSPNLVFILADHINFAIIREKNGMDISLPYSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-----V 176 +++ YP ++ + + ++ L LPK EV I MH ++A N + AG + Sbjct: 117 ELEYEYPLLTKISKWMVKKTNEELDTHLPKGEVTSITMHFINALEGTNTKMHAGNIENKI 176 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 ++++ + +++ F+ N ++S +Y R HLK+ R D++ L +++ + Sbjct: 177 SKVIFNVTNIVEKHFNFNIDKKSFNYFRFKNHLKYFVQRKEAREMFTDNNRELYESMIEK 236 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 YP + C +I + +Y+ K + E+++L +++ R+ Sbjct: 237 YPDTYDCISKIDNYFYQEYKEKCTTEELLYLLVHVNRL 274 >UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKZ8_CORK4 Length = 290 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 148/285 (51%), Gaps = 11/285 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELN-GRL 61 M+I ++LNNNVV+ D E V+ G G+GF K+AG+ ++ S +++ + + H N + Sbjct: 1 MKIVRVLNNNVVLATRDDGGEVVLTGWGLGFGKKAGQPVDKSNVKQVF-VPEHGRNVDNM 59 Query: 62 SELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKR---FQQNVLLPN 117 LL+ + L+ + ++ +A + + + I+L DH Q ++ R + + Sbjct: 60 GSLLASLNLDYVDLATNLVDGVAGSLVPHPESATVIALADHIQMSVTRQGLADAHANDGH 119 Query: 118 PLLWDIQRLYPKEFQLGEEALTIID----KRLGVQLPKDEVGFIAMHLVSAQM-SGNMED 172 PL +++ LYP E+++ E L + +R LP E I +HLV+A + ++ D Sbjct: 120 PLEAEVRHLYPDEYRVAERMLAETNAWLARRRQPPLPHAEATAITLHLVNAAFHTDDLSD 179 Query: 173 VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQA 232 +T L ++ ++ + +S++ R +TH+++ R+ +N+ L+ + Sbjct: 180 TYTMTGLFSQLFDIVDSSLGITMDRKSVNAARFITHMRYFFVRVRNGNQLNEGMSVLRDS 239 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Q++P A CA+R+A + L+ +++ E +LA+++ R+ E Sbjct: 240 LGQSHPDAVLCADRLASVLELRLDTELTDDERAYLALHVARLSVE 284 >UniRef50_C4VQU1 Cryptic beta-glucoside bgl operon antiterminator (Fragment) n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VQU1_9LACO Length = 139 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 1/138 (0%) Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 + N LLWDI+ YPKE+++G AL II+ +L DE GFI MH+V AQM DV Sbjct: 1 MKNNLLWDIKHFYPKEYKIGLAALDIIEHLTSFRLNDDEAGFITMHIVDAQMEQGSHDVN 60 Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL-EHASINDSDESLQQAV 233 G+TQ ++E+ Q++K+ E S Y R +THLK+L+ RI +H I D+ + + V Sbjct: 61 GITQFIQEITQILKYACHQEIDENSSYYYRFITHLKYLAQRIFNQHQDITPPDKMMLKLV 120 Query: 234 KQNYPQAWQCAERIAIFI 251 + YPQ++ A +I FI Sbjct: 121 ENQYPQSFIYARKIIAFI 138 >UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriaceae RepID=O07655_ECOLX Length = 293 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 127/225 (56%), Gaps = 3/225 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNN V + Q E ++ G G+G+ K+ G + + + + + + N +L Sbjct: 20 MIIEKVMNNNCVQASMNGQ-EVIISGPGVGYNKKYGMLVPEHPANRIFYVRNEQKN-KLY 77 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ H+ +E ++ ++I+ A++ L K L S+ + L DH AI R + + N L Sbjct: 78 KLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLD 137 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY E+ + +ALTII+++ VQLP DE+GFIA+H+++ + + + +L + Sbjct: 138 EIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQ 197 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD 226 + +LI+ ++ + S +Y R + HLK+LS R+L + I D Sbjct: 198 IITELIEVVYNRKVERSSSNYSRFMMHLKYLSSRVLCNEKIKQKD 242 >UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus RepID=D0R2Y6_LACJF Length = 279 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 146/284 (51%), Gaps = 16/284 (5%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +I +ILNNNV +V ++ +VMGRG+ F K+ G+ I ++K + + Sbjct: 1 MEYRIAQILNNNVAIVHTRDNKQNIVMGRGVVFHKQKGDLIQEENVDKVFEIKDKNTVND 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+++PL+ + T +I Q + ++ IY++LT H A +R +N N Sbjct: 61 LTTLLANVPLDFVTTSYDLIDQVQAKYKFAVEPYIYVTLTTHLFGAYQRLIKNEEDVN-Y 119 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L D+ YP +Q+ ++ +T L + P+ E IA+H ++A S ++ + T+ Sbjct: 120 LPDLSDTYPIPYQIADDVITGFRNSLDISFPESEHKSIALHFINAHTSESINEDKNQTE- 178 Query: 180 MREMLQLIKFQFSLN----YQEESLSYQRLVTHLKFLSWRILEHASINDSD-----ESLQ 230 E++++++ + + N Q Y RL+ HLK+ R+ + N+ D E + Sbjct: 179 NDEIIKVVQDELNRNGIYRTQPNVNDYDRLLVHLKYFINRL----NNNEPDSLPISEGMI 234 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++ NY QAWQ ++I + + Q +S +E +L I+I+R+ Sbjct: 235 GEIENNYSQAWQIVQQIKELMQEKLQINLSLSEQTYLTIHIQRL 278 >UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GB96_9ACTN Length = 283 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 141/277 (50%), Gaps = 9/277 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + LNNN V+ D RE V +G+GIG+ ++ S +E+ + + ++ Sbjct: 1 MLAIRKLNNNAVICRDSLNREVVALGKGIGYGGDFPRELDISTVERTF----YSVDAEGQ 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P +V+ +++ + L ++ + + + DH FAI R ++ + L + Sbjct: 57 RIMRDLPADVLIFTAKVMDIVSNELPYEVSPNAVLIMADHLAFAIARQKKGICFDMTLAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA----GVT 177 D+++LYP E+++G + + + +GV+LP +E+ IAM+LV+A+ E + Sbjct: 117 DVRQLYPLEYKIGRYIVARLRQEMGVELPHEEIASIAMNLVNAKTGAEAEASSDRARSFE 176 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 QL+ ++ +++ F E+ Y R TH+++L RI +I+ ++ L + + Sbjct: 177 QLLNDVTAIVERDFRTIIDRETFEYSRFATHVQYLFRRIQGGENISSANLPLYGNSLEEF 236 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ C + I+ I + +++ E ++L +++ R+ Sbjct: 237 PELASCIDHISTCIERSWGTRLTDEEKLYLMLHVNRI 273 >UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acnes RepID=D1YA29_PROAC Length = 303 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 142/275 (51%), Gaps = 3/275 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 + KI NNNV++ ++ E VV RGI + + GE +++S ++ A ++ ++ L Sbjct: 24 VKKIYNNNVLLGVNGSGTEMVVNARGIAYGRHRGEIVDASSAQRYVAEGAYRTTA-IASL 82 Query: 65 LSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L++ + I+ LA+E LG + + + DH A+ R +Q ++ PL W++ Sbjct: 83 LTNATHTEVRVAQAIVELAREELGTPHARRMMLPILDHLVAAVHRAKQGAVIDFPLEWEV 142 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLMRE 182 ++LYP E +LG A+ I+D LG+ L +E ++H ++ + S ++ +TQ + + Sbjct: 143 RQLYPDEAELGRRAVEIVDGALGIHLQPEEWVAFSLHFINQRWDSRDVSRTMSMTQTICD 202 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + ++ + + S+S R VTHL++L R ++ ++ D + + YP+A Sbjct: 203 VFTELEDLWHVEIDRSSMSASRFVTHLRYLFARASDNKQLSHVDLDIVGLMSDRYPEATL 262 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A ++A + ++ AEI ++A++ R+ E Sbjct: 263 AASQVAEHMSKVIGNDLTKAEINYIALHTTRLYNE 297 >UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR0_9ACTN Length = 188 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 103/186 (55%), Gaps = 5/186 (2%) Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVG 155 + L DH Q+A++R + + NPL ++ +YP+E +LG + ++ +R+GV LP+ E+ Sbjct: 2 VCLADHLQYALERTGDGIAIENPLSHEVAFVYPREVELGRRGIELVSERMGVNLPESEIT 61 Query: 156 FIAMHLVSAQMSG-----NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLK 210 IA+HLV+A++ G +M+ V T ++ Q+I+ Q S +Y R V HL+ Sbjct: 62 SIALHLVNAEVDGMGSSQDMDLVMKSTVILERATQVIEGQLGQQLDRTSYAYVRFVAHLR 121 Query: 211 FLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 FL R++ + L + +++P A++CA I ++ Y S E+++L ++ Sbjct: 122 FLIRRLMRGGCKETENSGLFRQAARDFPDAYRCAAGINEYLKRDYNWSCSDEEMLYLMMH 181 Query: 271 IERVRK 276 + R+R+ Sbjct: 182 VNRLRQ 187 >UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y550_9FIRM Length = 278 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 145/273 (53%), Gaps = 7/273 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN + D + + +V GRG+GFQK E + S I + Y + N Sbjct: 1 MKLLKKINNNFALAEDSKGEQVIVEGRGVGFQKMPCELNDLSSISRTY----YGFNSETI 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + +++ D++ + A +++ +L ++ +L DH +F I+R +N+ L PL + Sbjct: 57 RLIQTVNPQILQIADQLYNEAVDQIPAELNPNLPFTLADHLEFCIERLNKNIELKMPLTY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YP E +L E AL I+++LG+ LP E IA+++++++++ + +L+ Sbjct: 117 ELESSYPLEMKLAENALERIEEQLGICLPASEKAGIALNIINSELTVKASNTQKEEELIA 176 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++I+ S +Y R TH+++L RI E S N S SL Q +++ Y + Sbjct: 177 GCTRIIEAHLHQTIHLNSFNYVRFATHMRYLLRRINEGVSENCS-YSLYQTMQKQYAKIA 235 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+++ + +S E +L ++++R+ Sbjct: 236 GIVNGMAVYLEVN-GYPVSEEEKFYLILHVQRL 267 >UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9E2_9CLOT Length = 168 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 95/158 (60%), Gaps = 2/158 (1%) Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGV 176 P + D QR YP+E+Q EAL I V LP DE G+IA+H V+A G M+ V Sbjct: 6 PAVGD-QRFYPREYQAAREALKTIAYYENVWLPDDEAGYIALHFVNATQEGEEMQTTIQV 64 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T+ ++E++++I+ F+++ E SLSYQRL+TH+++ R+ + D+ L + VK Sbjct: 65 TETVQELIKMIQIHFNMSLDETSLSYQRLITHIRYFVRRLFVNEPAGGGDDLLFEQVKSA 124 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 YP+++ C +I + +++ +I+ E+ +L ++I RV Sbjct: 125 YPRSYTCVCKIRDYFRMKFHCEITEEEMTYLMLHIRRV 162 >UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR4_9ACTN Length = 295 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 20/283 (7%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSS-----HE 56 MQ + +NNNV + +D E V MG+GIGF K + ++ ALS + Sbjct: 12 GMQAIRSINNNVAICVDAGGNECVAMGKGIGFGK----------MPRDVALSEVTHTYYS 61 Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLL 115 ++ RL E + IP +V+ R + L L ++ L DH FAIKR ++++ + Sbjct: 62 VDPRLLEGIKEIPQDVLLFAARAAEHVRAELSYALSPNMAFLLADHIAFAIKRAREHLQV 121 Query: 116 PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 PL +D++ YP+E+++G + I K V L DE IAM+LV++++ E A Sbjct: 122 RMPLAYDVEHNYPEEYRVGLRLVRQIRKEFLVDLGDDEAAGIAMNLVNSRLESVSEQDAA 181 Query: 176 VTQ----LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 +Q ++ E+ ++++ +F L S ++ R THL +L R+ + S + Sbjct: 182 RSQSDDIMLEEITEIVEEEFGLRVDRASFAFSRYATHLHYLFARLHRGEVLRTEAISGLE 241 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++P+ C ERIA I + + E +FL ++I R+ Sbjct: 242 GLFDHFPEGVACVERIADHIMDAWGVTLDADEKLFLVLHISRI 284 >UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TMP5_ALKMQ Length = 163 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 100/158 (63%), Gaps = 11/158 (6%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 + KILNNNVV+ D + +++G+G+GF K+A + I+ + +E+ + +S ELN + E Sbjct: 4 VEKILNNNVVIAEKDN-LQYILVGKGLGFGKKARDTIHKNDVERAF-VSIEELNIKGDE- 60 Query: 65 LSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 ++ + II +A+++LG+ L D ++ L DH FAI R Q+ + + NP L + Sbjct: 61 -------IVGVSEEIIVMAEKQLGESLGDKVHTGLIDHIHFAINRIQEGINISNPFLNET 113 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 + LYP EF + +A+ ++ RLG+ +P+DE+GFIA+H+ Sbjct: 114 KALYPVEFSIASQAVALLCVRLGIDVPQDEIGFIALHI 151 >UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactobacillus rhamnosus RepID=C7TG18_LACRL Length = 288 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 150/283 (53%), Gaps = 13/283 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +++ ++ NNN V+V +E ++ G+GIGF KR G+ ++ + L+ ++ + Sbjct: 2 LKVKQVYNNNAVLVDVGNGKEAILQGKGIGFSKRKGDDVDPKASSEILYLNDTQVKNHFT 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL +P++++ +I +A+++ + + IY++LTDH KR +P Sbjct: 62 SLLKDVPIDIVVATFGVIGMAKKKYHYPVLNYIYVTLTDHVFQMYKRLTAGKYQASP-AP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 DI+ YP +Q+ +A ++ LGVQ P+ E+ IA+H ++A+ + G ++ +T + Sbjct: 121 DIRDRYPLPYQIAADARRQLNHDLGVQFPEAEIKNIALHFINAKGVDGELDPTVTLTARV 180 Query: 181 REMLQLIKFQFSLNYQEESLSY-QRLVTHLKFLSWRILEHASINDSDES-----LQQAVK 234 ++ + ++ LN + +Y RL+ HL++L R+ + N+ DE+ + Q + Sbjct: 181 NAIVTQVFAKYGLNRNFANQNYFDRLMIHLQYLVERL----NTNEQDEADLGPEIGQDFR 236 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + YP+++ A I + Q K++ E ++ I+I+R+ +E Sbjct: 237 RLYPKSFTIATEICTELEKALQIKLNENEHVYFIIHIQRLIQE 279 >UniRef50_A0FL05 Putative transcriptional antiterminator (Fragment) n=1 Tax=Lactobacillus paracasei RepID=A0FL05_LACPA Length = 231 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 7/198 (3%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL IP D IISLAQ+ + + + I LTDH FA++R + +++ NP+ Sbjct: 30 FKELAREIPRSYFELTDSIISLAQKSINVEFDGHLLIPLTDHIYFAVQRIKSGLVVSNPM 89 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ- 178 L+DI+RL+PKEFQ+G+EAL +I V DE GFIAMHL+ +++ V V++ Sbjct: 90 LFDIRRLFPKEFQVGQEALALISSFSDVSFSDDEAGFIAMHLIEHELTETNSSVQSVSEA 149 Query: 179 --LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAV 233 ++ + +++ + + E SL+ R+ THL +L R + ++ D L + Sbjct: 150 LDILSGVNEILGKDYGEKFSESSLAVSRMATHLYYLLLRTHDGKKVDLVETDDTVLLCQL 209 Query: 234 KQNYPQAWQCAERIAIFI 251 K+ YP A RI I Sbjct: 210 KKQYPNAGLDVGRIVALI 227 >UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2E1U8_9LACO Length = 292 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 152/286 (53%), Gaps = 12/286 (4%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M ++ ++LNNNV + + + V+MG+G+ FQK+ G+ I +S ++K + L E Sbjct: 1 MTFRLVQVLNNNVGLACKEDDSQVVIMGKGLTFQKKKGDIIKASAVQKVFKLHE-ESPSD 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+ IPL+ + +I AQE+ ++ IY SLT H + KR L+ Sbjct: 60 LTSLLATIPLDFLTVSYSLIDEAQEKYDYSVEPYIYASLTTHLYESAKRLADGRLVET-Y 118 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L D+++ YP +++ L RL ++ PK E +A+H ++A+ + ++ A ++ Sbjct: 119 LPDLEKDYPLPYEIAGYVLDGFATRLNIKFPKQEQKSVALHFLNARTDIHTQNQAQRRKV 178 Query: 180 --MREMLQLIKFQFSLNYQ-----EESLSYQRLVTHLKFLSWRILEHASINDSDESLQQA 232 +++L +++ + + N+Q + + Y+RL+ HLK+ RI + + ++ Q Sbjct: 179 DKNKQILAIVENELN-NHQIYRNRDNANDYERLLVHLKYFINRINQKPAPQVLSAAIFQE 237 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER-VRKE 277 V ++YP+ + ++I I + + + E ++L I+I R +RKE Sbjct: 238 VVKDYPRTFAIVQKINDQIKQKMGLEFTNDEQVYLTIHIPRLIRKE 283 >UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Streptococcus RepID=B1IBZ3_STRPI Length = 278 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 139/275 (50%), Gaps = 5/275 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I +N+NV +V +D+ E +V+G+GI F K+ G+ I + +EK + + + E Sbjct: 3 RILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENQVEKIFRMKTEESRENFMA 62 Query: 64 LLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LL +PL+ + II L+++ +Q+ +Y++LTDH + + Q + L D Sbjct: 63 LLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQG-RYKDSNLPD 121 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV---TQL 179 I YP FQ+ EA I ++L P+DE+ IA H ++A+ +E V + ++ Sbjct: 122 ISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKEI 181 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +R + +++ ++ + Y R + HL + + N S ++ +KQ+YP+ Sbjct: 182 LRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYPK 241 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ +I I + +E ++L ++I+R+ Sbjct: 242 AFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRL 276 >UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1A7_ERYRH Length = 289 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 141/270 (52%), Gaps = 5/270 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ + +N+V D+ + +++G+GIGF ++ I+ + Y + + + Sbjct: 18 FKVVRAFTHNIVFAQLDK-YDYILIGKGIGFDAKSKAVIDEESVTSFYRIQDLDKMSQYE 76 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ + +V+ + I+ A++ L K +SI+ISL DH FAI R+ V + N Sbjct: 77 KIVMNTDDQVLLVTEAAIAYAEKTLNYKFDESIHISLLDHINFAIYRYHNRVKMSNFFTE 136 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +Y + + + + + +I+ L V+LP EVG + +HL +A G + + A Q++ Sbjct: 137 EYYLMYSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAAMHQGKVSNSAFYAQVIT 196 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 + I + + + S+ RL+THLKF R ++ ++ + L +++ Y +A+ Sbjct: 197 ASVDFINKRIPEEFTQNSVGKARLITHLKFAFKRSEDNVTLTN---PLIDILRERYCEAY 253 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + +E +A+ + ++ ++ +EI ++A++I Sbjct: 254 EISEDLALMLDQEFNIQLPESEIGYIALHI 283 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 6/86 (6%) Query: 82 LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTII 141 Q +GK + L H +FA KR + NV L NPL+ ++ Y + +++ E+ ++ Sbjct: 210 FTQNSVGKAR------LITHLKFAFKRSEDNVTLTNPLIDILRERYCEAYEISEDLALML 263 Query: 142 DKRLGVQLPKDEVGFIAMHLVSAQMS 167 D+ +QLP+ E+G+IA+H+ + Q S Sbjct: 264 DQEFNIQLPESEIGYIALHIYNLQHS 289 >UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDR3_9STRE Length = 199 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 109/195 (55%), Gaps = 11/195 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I + LNNNV +V ++Q + VVMG GI FQK+ + I S +EK + L + E Sbjct: 2 FRIVQALNNNVALVKNEQDDQAVVMGLGIVFQKKKSDLITPSKVEKVFLLKTEESKENFL 61 Query: 63 ELLSHIPLEVMA-TCDRIISLAQERLGKLQDSIYISLTDHC----QFAIKRFQQNVLLPN 117 LL +I L+++ T + I L + +Q+ +Y+S TDH Q +K Q LP Sbjct: 62 TLLKNILLDILTVTYNMIDDLVAKYHFPVQEYLYVSPTDHVYLVYQKLLKGAHQESHLP- 120 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 DI Y EFQ+ +EA+ I+ ++L V P+DE+G IA+H ++A+ G + ++ Sbjct: 121 ----DISAAYVTEFQMAQEAVAILSQKLSVTFPEDELGRIAIHFINAKREGEVTPSFQIS 176 Query: 178 QLMREMLQLIKFQFS 192 + + +L+L+K +FS Sbjct: 177 R-TKHILELVKQEFS 190 >UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFC1_9FIRM Length = 290 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 19/289 (6%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQ-KRAGERINSSGIEKEYALSSHELNG 59 M+ K +NNN + ++ E +++G+ IG + R+ + + + ++ +E Sbjct: 3 MDYFYLKTINNNAICATNEYHHEVIILGKAIGIKCNRSFHSLVDKKLIERVFIADNENRK 62 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 + ++ IP + D +I A++ L K +D +Y+SL DH FA K ++ + NP Sbjct: 63 YIETIIGQIPYTLFKVVDDVIKQAEDDLQTKFKDVLYLSLLDHIYFAYKTWEDKQKIENP 122 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 LL +++ KEF + ++ II+ L + E FIA H ++A N+ T Sbjct: 123 LLNELKMFNSKEFNAAKHSIQIINNTLKTDFDEHEAAFIAFHYINAL--SNLSSFQNKT- 179 Query: 179 LMREMLQLIKFQFSL-NY--QEESLSYQRLVTHLKFLSWRIL-------EHASINDSDES 228 +M+++ Q + + L NY + S Y RL+ HLK L R++ + A IND S Sbjct: 180 IMKDLEQTVNYIDKLTNYSLDKSSYLYGRLLIHLKCLFNRLVTDERIEYDAAFINDFSNS 239 Query: 229 LQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 L+ A + + W+ A +I+ F+ + ++ E +L ++I + K+ Sbjct: 240 LKVA----HEEEWEYAVKISSFMKYELHLNVNDGETAYLTMHIVPILKQ 284 >UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Streptococcus RepID=B4U1G3_STREM Length = 283 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ + LNNN +V + + VVMG GI FQK+ G+ I +EK + L + E L Sbjct: 9 FRLIRPLNNNAALVKNAANEQAVVMGAGIAFQKKKGDLIREEAVEKTFLLKNDEARENLL 68 Query: 63 ELLSHIPLEVMA-TCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL +PL+V+ T D I L +Q +Y++LTDH A Q+ N L Sbjct: 69 LLLKDVPLDVITVTYDVIDWLVLTYHYPVQQYLYVTLTDHIYAAYHMLQKGTYSVNR-LP 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA--QMSGNMEDVAGVTQL 179 DI + + +E+++ + AL + +RL P DEV IA+H ++A + S + + +L Sbjct: 128 DISKEFGQEYEMAQAALEMFRQRLRTTFPDDEVTKIALHFINAKGEESSPQREHSSTKKL 187 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ + S Y RL+ HL + + + SL+Q +K+ YP+ Sbjct: 188 LNQVEAALMANGITRTSTNSHFYDRLMIHLTYFIQSLDRKNQGYHAMGSLEQQIKKEYPK 247 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ I + +++ +E +++ I+I+R+ Sbjct: 248 AYEIGNAIYQLMTDLTGQELVESEKIYIVIHIQRL 282 >UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lactobacillus gasseri RepID=Q045X5_LACGA Length = 304 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 147/284 (51%), Gaps = 21/284 (7%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I ++ NNN +V RE VV+G GI F+K G+ I++S +E + L + + L Sbjct: 21 IKRVFNNNSALVELGNNREAVVVGNGIAFKKTEGKEIDTSKVENIFYLENSATKRTIFSL 80 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L + P+++ T +++ A ++ +L D Y+SL++H R N + + DI Sbjct: 81 LKNTPIDIAVTTMHVVNHAYKKYHYELFDYFYLSLSEHILGVYHRILDNTYQTSQ-IPDI 139 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-----------NMED 172 + YP E ++ +E++ II++ L ++LP E I +HL++A++ N+E+ Sbjct: 140 KDEYPLENKIAQESVKIIERDLKIKLPVSERKNIMLHLINARIPEKKQVNREKNIINIEE 199 Query: 173 VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQ 230 + + Q++ + + ++ + N E Y+R + HL++L R+ + SD + ++ Sbjct: 200 MLHIVQVILDQHNI--YRLASNNDE----YERFMIHLQYLFRRLEQGKKFRSSDITKKVK 253 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + YP+++ + I + +Q +IS E ++L ++I+R+ Sbjct: 254 DELISEYPESFVVVKEIDEQLKQDFQWEISDEEKLYLIVHIQRI 297 >UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU78_9BACI Length = 182 Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 102/179 (56%), Gaps = 1/179 (0%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 +LTDH FAI R + + + NP L + + LY E+++ + + ++++ V+LP+ E+GF Sbjct: 1 ALTDHILFAINRLMKGMAIRNPFLMETKALYLFEYEVARDVVALLNEETNVELPEGEIGF 60 Query: 157 IAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI 216 IA+H+ SA M+ ++ V ++L+ + I+ N +ES+ Y RLV HL++ R+ Sbjct: 61 IALHIHSAMMNKDLSQVNQHSRLIGTLTSTIENTLEANIDKESVHYMRLVRHLRYTIERV 120 Query: 217 LEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 L + + E + +K+ YP + + ++ + ++ + AE ++L ++++R++ Sbjct: 121 LRQERVQEP-EKIALLLKEEYPLCYNLSWKLIKIMQQTLKKPVDDAEAVYLTMHLQRIQ 178 >UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWD6_9BACI Length = 287 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 14/214 (6%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 ++ K LNNNV++ D +E + +G+GIGF K+AG +S +K Y L + R Sbjct: 7 RVVKALNNNVLIAKTDIDQEVIFIGKGIGFGKKAGHDYQASKSDKVYMLIDQDEQDRYKA 66 Query: 64 LLSHIPLE-VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L++ E ++A + I + E +L DS +LT H A++R + NP L + Sbjct: 67 LVTEDNEERLLAVHEAIARIESEMAIRLPDSALFALTQHLALALQRTTDGTDIQNPFLLE 126 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSG------NMEDVAG 175 + LY ++L E+A+ + K G+ LP+ E+GF+ +H+ SA + SG N+EDV Sbjct: 127 TKWLYRDSYRLAEQAVHFLMKETGLSLPEAEIGFVTLHIQSALRDSGPEYSNRNLEDV-- 184 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHL 209 + L I+ + + E S + +RL++ + Sbjct: 185 ----LERCLFYIEEKTGASLDERSGTVRRLISQI 214 >UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Y8_9BACI Length = 200 Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 2/178 (1%) Query: 71 EVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 + + + I + R G L + I+I LTDH FA+KR + + NP L + + YP+ Sbjct: 5 QFVGVMNEFIDKLETRFGANLNEHIHIGLTDHLHFAVKRIENGQGIHNPFLQETELAYPQ 64 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKF 189 EF + E ++G+++P E+GFI +H+ SA + ++ D+ TQ++ E++ +I+ Sbjct: 65 EFAVATELTEWFGNQVGIRIPPGEIGFITLHIHSALTNRDLGDINRHTQMVSELVGMIEE 124 Query: 190 QFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERI 247 + ++Y RLV HL RI + + D+ ++L+ +++ YP + A ++ Sbjct: 125 NLKMTIDRRDMNYLRLVRHLHHAIERI-QFENYVDNQDALKAVLQKEYPVCYNLAWKL 181 >UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Clostridium perfringens RepID=Q8XP92_CLOPE Length = 194 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 90/157 (57%), Gaps = 3/157 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLS 62 ++ + NNN+V+V DD ++E ++ +GIGF + G I ++ IEK + + Sbjct: 10 EVKRSFNNNIVLV-DDDEKEIILFAKGIGFNCKKGSIIPENTNIEKIFTIQDENNIANFR 68 Query: 63 ELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ + +A C+ +I ++++ +L + I+I L DH FAI+R ++ +L NP L Sbjct: 69 RVVGSNDEKFIAFCEELILEISRDFSDELNEIIHIGLIDHISFAIERMKKGEILRNPFLV 128 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIA 158 +I+ LYPKEF+ + + ++ GV + DE+GFIA Sbjct: 129 EIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIA 165 >UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=Corynebacterium glutamicum RepID=Q6M215_CORGL Length = 196 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 104/190 (54%), Gaps = 8/190 (4%) Query: 96 ISLTDHCQFAIKRFQQNVLL---PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ---- 148 ++L DH Q A+KR + L PNPL ++ LYP+E +L E L + L + Sbjct: 1 MALADHLQMAVKRNELEPELTSNPNPLSAEVHHLYPEETRLATEILERTNNWLAEKGIPP 60 Query: 149 LPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 LP EV I++HLV+A + ++ + +T + ++ ++I F + +S++ R +T Sbjct: 61 LPPAEVVAISLHLVNAGFRTEDLAETYVMTGVFEQLFEVIDSSFGITLDRQSVNAARFIT 120 Query: 208 HLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFL 267 H+++ R+ +ND L+ +++ ++P + CAER++ + L+ ++S E +L Sbjct: 121 HMRYFFVRVHHDGQLNDGMSVLRNSLEISHPDSVACAERLSQILSLRLGAELSSDEQTYL 180 Query: 268 AINIERVRKE 277 A+++ R+ ++ Sbjct: 181 ALHVARLAED 190 >UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUJ1_9FIRM Length = 283 Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 139/279 (49%), Gaps = 7/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ + LN N V+V D E V +G+G+GF K+ G+ I+ + + + ++L+S +L Sbjct: 1 MKVIQSLNQNAVLVARDDGAELVALGKGVGFGKKKGDTIDPTAVTRVFSLASSYRQEQLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + V I +A+ L K L D+ ++ H Q+A+ R +P + Sbjct: 61 GLIKELEPWVFELAQDITIIAEACLKKSLMDTFIFTIAKHLQYALDREPNEEGDYDPFQY 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 + LYP E+Q EA+ ++ + ++L ++EV F+ +HLV+ Q+ +V +++++ Sbjct: 121 QLHYLYPDEYQAAAEAIAQVNAKYQLRLAQEEVSFLTLHLVNGQIDQAGFHNVVELSEIL 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEH-----ASINDSDESLQQAVKQ 235 ++Q+I+ + +ES Y R V H+++ R L H A + E++ + Sbjct: 181 NRLIQVIEAKTGEPLDKESPDYGRFVVHIRYFLIRTLSHQTGQEAVSPEKIETVLETTAG 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +P+ W + + + ++ E +L +++ R+ Sbjct: 241 VFPREWGLVKALKETLQAEFNLSFGQDEDFYLLLHLVRI 279 >UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebacterium glucuronolyticum RepID=C2GFH3_9CORY Length = 333 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 34/218 (15%) Query: 2 NMQITKILNNNVVVVI--------DDQQR---------------------EKVVMGRGIG 32 N +I ++L+NN V+V D QR +V++GRGIG Sbjct: 25 NPRIIRVLSNNAVLVRVPSGVPGEDTAQRAQNTAQNTNTNNTNNTQPTQDTQVLVGRGIG 84 Query: 33 FQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQD 92 FQ++ G+ I+ + +++Y S E L +LS P VM T + LA + LG+L Sbjct: 85 FQRKPGDEISPATADRQYLELSPERAQFLKGVLSLDP-AVMETISAAVDLAVDLLGELHP 143 Query: 93 SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLG-VQLPK 151 S+Y+ L +H FA++R + N L+ +I+ +P EFQ + ++ I+ LP Sbjct: 144 SVYVVLAEHISFAVQRAGSGEQIRNSLVDEIRAAFPLEFQAAQLMVSYINSHTANATLPV 203 Query: 152 DEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKF 189 DE FIA+HL +A+ ++ V E+ L++F Sbjct: 204 DEAAFIALHLNAARQGVTVKQPLAVAN---ELAGLLRF 238 >UniRef50_Q5WDQ4 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDQ4_BACSK Length = 109 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+ NN+VV+ ++ +E VVMGRG+ FQK+AGE I+++ IEK + L ++ +L+ Sbjct: 1 MQIKKVFNNHVVLAQNEWDQEMVVMGRGLAFQKKAGETIDTAKIEKTFVLEKRGVSDKLA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIK 107 +LL + +I+ A+ +L KL +Y+ L DH FAIK Sbjct: 61 KLLRDTSELYLNIASKILDYAKSQLSYKLDGYLYVDLADHMSFAIK 106 >UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GN87_BIFLI Length = 192 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 13/169 (7%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D+ RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLA-KDRGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-----KLQDSIYISLTDHCQFAIKRFQQNV-LLP 116 +LL IP E++ R+IS + +G ++ I+L DH A++R + + +P Sbjct: 60 QLLGDIPPEII----RLISETMDGIGLSSEAAQSSTLVIALADHVCGALRRAKNGIPPVP 115 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL-PKDEVGFIAMHLVSA 164 PL +I+ LY +E+Q G L +++RL L P + V F A+H V+A Sbjct: 116 YPLNSEIRSLYEREYQQGCALLAALNRRLDDALDPSESVAF-ALHFVNA 163 >UniRef50_UPI000058969E transcription antiterminator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI000058969E Length = 112 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 63/89 (70%), Gaps = 1/89 (1%) Query: 159 MHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE 218 MH+V+A M N+ ++ +T++ + +L ++++ F+L+ E++LSY R +THLKF S R++ Sbjct: 1 MHIVNASMDENIANIYEITKITKSILDIVRYHFNLHINEDALSYSRFMTHLKFFSQRLIN 60 Query: 219 HASIND-SDESLQQAVKQNYPQAWQCAER 246 H S+N+ +DESL Q ++Q + ++ C ++ Sbjct: 61 HESLNEVTDESLLQVLQQKHVKSDACVDK 89 >UniRef50_C6PDR4 PTS system transcriptional activator n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PDR4_CLOTS Length = 899 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 1/96 (1%) Query: 71 EVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 +++ DRI L E LGK L + Y +L H I+R +N + NP L I++LYP+ Sbjct: 440 DIINITDRIAELVSELLGKELSQNSYTALALHLNTLIERVNKNKPIVNPQLSKIKQLYPR 499 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ 165 EF++ EA II+K L V +P+DE GFI + L+S + Sbjct: 500 EFEVAVEAKKIIEKYLNVSIPEDEAGFITIFLISDK 535 >UniRef50_C0D971 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D971_9CLOT Length = 99 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +M I KI NNN+V+V D++Q E +++GRGI FQK+AG+ I+ EK + + S EL R Sbjct: 22 HMVIKKIYNNNIVLVEDEKQLEMILLGRGIAFQKKAGDEIDPGRAEKRFVIDSPELTSRF 81 Query: 62 SELLSHIPLEVMATCDRI 79 SEL+ +P+ + RI Sbjct: 82 SELVKEVPVNHLELSCRI 99 >UniRef50_Q44651 Beta-glucanase (bglA) (Fragment) n=1 Tax=Bacillus amyloliquefaciens RepID=Q44651_BACAM Length = 85 Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 51/83 (61%) Query: 195 YQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQ 254 + EESL Y R VTHLKF R+ + D+ L + VK+ Y QA++C + I +I + Sbjct: 2 FNEESLHYYRFVTHLKFFDQRLFNGTHMESQDDFLLETVKEKYHQAYKCTKNIHTYIEKE 61 Query: 255 YQRKISPAEIMFLAINIERVRKE 277 Y K++ E+++L I+IERV K+ Sbjct: 62 YGHKLTSDELLYLTIHIERVVKQ 84 >UniRef50_A8R873 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R873_9FIRM Length = 162 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 10/155 (6%) Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL-VSAQMSGNMED---VAGVTQLMR 181 ++ + +Q+G+ A+ I++ L V LPKDE IA HL V++Q N+E + GV ++ Sbjct: 1 MWGESYQVGKCAIQYINETLHVDLPKDEATSIAFHLIVASQEKTNIETRELLEGVNSIVN 60 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE--SLQQAVKQNYPQ 239 ++ + Q E+SL+Y R + HLKF RI+ H + N S E ++ + Y Sbjct: 61 ITMKYLGNQID----EDSLAYSRYIIHLKFFLSRIVSHQTSNGSIEVTNIFGQLVTKYEG 116 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C I+ FI ++ + + + ++L I+I R+ Sbjct: 117 VDRCIHEISEFINGKFNYRCTDEDCIYLMIHIVRL 151 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 114/219 (52%), Gaps = 16/219 (7%) Query: 64 LLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLL 120 LL+ I ++ + I+S L +E +L DS YI L H AI+R + +N+ + +L Sbjct: 214 LLNFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIKIDPDVL 273 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-----EDVAG 175 ++ +L EF++G+ + I+ + +++P DE+G+I MHL A++ N ED+A Sbjct: 274 EELAKL--PEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNSVSKLEEDIAN 331 Query: 176 --VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 + ++ + ++++++ + ++ +++ + L HL R+ +I + L + Sbjct: 332 LDIKRIGKNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRN---PLLNNI 388 Query: 234 KQNYPQAWQCAERIAIFIGLQYQ-RKISPAEIMFLAINI 271 K+ YP + ++ + L + +I +EI ++ ++I Sbjct: 389 KEKYPMEYNATKKACEILKLNTKVDEIPDSEIAYITMHI 427 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGV-QLPKDEVG 155 LT+H AI R + + + NPLL +I+ YP E+ ++A I+ V ++P E+ Sbjct: 362 DLTNHLVPAISRLKMKLNIRNPLLNNIKEKYPMEYNATKKACEILKLNTKVDEIPDSEIA 421 Query: 156 FIAMHLVSAQMSGNMED 172 +I MH+ +A +E+ Sbjct: 422 YITMHIAAAIYKKGLEE 438 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 44/248 (17%) Query: 54 SHELNGRL-----SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIK 107 S E++G + + LL+ I E + T + +I +A+E +G KL DS Y+ L H AIK Sbjct: 190 SPEISGSIEIKTRNRLLNLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIK 249 Query: 108 RFQQNVLLPNPLLWDIQRLYPKEF--QLGEEALTIIDKRLGVQLP--------KDEVGFI 157 R + N ++ + KEF +L + II ++L + L +DE+G+I Sbjct: 250 RIKNNEII----------IMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYI 299 Query: 158 AMHLVSAQMSGNMEDVAGVT-------QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLK 210 MHL+ ++ GN+ T +L REM+++ + + LV HL+ Sbjct: 300 TMHLMGSKNRGNVTKNETSTIGSFELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLE 359 Query: 211 FLSWRILEHASINDSDESLQQAVKQNYPQ----AWQCAERIAIFIGLQYQRKISPAEIMF 266 RI I + L Q +K YP + +CA+ + ++G +K+ +EI + Sbjct: 360 PAIKRIKMKMDIRN---PLLQEIKTRYPHLIKVSSKCAKVLEDYLG----QKMPESEIAY 412 Query: 267 LAINIERV 274 +A+++ V Sbjct: 413 IAMHLGAV 420 >UniRef50_C4VQU0 Transcription antiterminator LicT n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VQU0_9LACO Length = 109 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Query: 22 REKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIIS 81 +E ++MGRG+GF+K+ G+ ++ I+K++ +H+ +L +L+ I L+ M + I++ Sbjct: 19 QEAIIMGRGLGFKKKRGDEVDPKKIDKKFYPQTHQNAEQLINMLNDISLDEMEAANEILN 78 Query: 82 LAQERLG-KLQDSIYISLTDHCQFAIKRFQQ 111 LA +L L D+ ISL+DH AI R ++ Sbjct: 79 LASNKLSMHLNDTEIISLSDHIHNAIARGKE 109 >UniRef50_C2EJ35 Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EJ35_9LACO Length = 84 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 1/84 (1%) Query: 159 MHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE 218 MH+V A M+ ++D+ G+TQ +++++Q++K+ E S Y R VTHL++L+ RI Sbjct: 1 MHIVEAHMNQTIDDLDGLTQFIQKVIQILKYACHQEIDEHSAYYYRFVTHLRYLAQRISS 60 Query: 219 H-ASINDSDESLQQAVKQNYPQAW 241 + S+ +D S+ + +K YP A+ Sbjct: 61 NQISVEKTDSSMLEIIKLQYPDAY 84 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 16/166 (9%) Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL----YPKEFQLGEEALTIIDKRL 145 + DS YI+L H AI+R Q + +D Q L KE++ E+ +++ Sbjct: 225 IADSSYIALVIHLALAIERIMQG----EAIHFDAQHLQTISMTKEYETAEKIAKRLEEVF 280 Query: 146 GVQLPKDEVGFIAMHLVSAQM---SGNMEDVAGVTQLMR--EMLQLIKFQFSLNYQEESL 200 + +PK+E+G+I MHL+ A++ G M + A + M+ E+++ + Q ++ ++ Sbjct: 281 HLVIPKEEIGYITMHLMGAKLRTHRGYMLEEASLEIAMKTQELIRFVSEQIGVDLTDDYP 340 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 Y+ L+ HLK +RI H I + L + ++Y + + +R Sbjct: 341 LYEDLIVHLKPALYRIQHHMGITN---PLLHKIMEDYSELFHVVQR 383 Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L LE+ +I E++G L D +Y L H + A+ R Q ++ + NPLL Sbjct: 308 MLEEASLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLL 367 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 I Y + F + + + + + V P++EVG++ +H SA Sbjct: 368 HKIMEDYSELFHVVQRGVRHVFSDMTV--PEEEVGYLVLHFASA 409 >UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8D8_9THEO Length = 897 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +S++ + + E++ + II +++RL K L +Y ++ H AI+R ++N + NP Sbjct: 429 VSDIENVVGAEIVRAVEEIIKFSEKRLNKVLSKEMYYAMAVHIYTAIERIKRNRKIVNPQ 488 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 L I+ Y +EF + + L II++ L V +P DE GF+AM Sbjct: 489 LNKIRTEYSEEFNIALDCLKIIERVLDVSMPIDEAGFLAMFF 530 >UniRef50_A4W1H2 Transcriptional antiterminator n=1 Tax=Streptococcus suis 98HAH33 RepID=A4W1H2_STRS2 Length = 162 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 13/157 (8%) Query: 64 LLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDH--CQF--AIKRFQQNVLLPNP 118 LL IPL+ ++ +I+ L + +Q+ +Y++LTDH C + +K Q LPN Sbjct: 11 LLKDIPLDFISATYTVINHLVETYHYPVQEYLYVTLTDHIYCAYQAVLKNTYQESRLPN- 69 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ---MSGNMEDVAG 175 I YP E+++ EAL + ++L P DE+G IA+HL++A+ + E+ Sbjct: 70 ----ISAEYPLEYKMAREALAMFREKLLNDFPNDEIGKIALHLINAKGETIHPTSEEHDI 125 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFL 212 +++ E+ Q++ +E S Y R + HL + Sbjct: 126 SKKIIAEVEQILIDNGIRRSKENSNFYDRFMIHLSYF 162 >UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Clostridia RepID=B0K7D9_THEP3 Length = 979 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 9/130 (6%) Query: 46 IEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFA 105 ++ A+S +L G + E +++ ++ +A++ +L+++++ SL H Sbjct: 479 VKSNIAISKKDLKGIVGE-------KIVEAAEKAYEIAKKSFSRLEENLFYSLAIHLSAT 531 Query: 106 IKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ 165 +R + NP L +I R YP E+ + I++ LG++LP++E+GFIAM+L + Sbjct: 532 YERILSGKPIINPQLENIIREYPAEYSTAKIMAKQIERELGIELPEEEIGFIAMYLRT-- 589 Query: 166 MSGNMEDVAG 175 SG E V G Sbjct: 590 FSGEKEIVKG 599 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 108/219 (49%), Gaps = 23/219 (10%) Query: 76 CDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDIQRLYPKEFQ 132 ++I+S A+ +L + D +ISL H +I+R + ++V L +L ++++ E+ Sbjct: 205 LEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVKLSKAVLNNLKQ--KDEYV 262 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN--------MEDVAGV---TQLMR 181 + ++ I+ + V LP+ E+G+I +H++ +M N +ED + + + Sbjct: 263 IAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAVIMSK 322 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E++ + + SL+ + L+ HL+ R+ ++ + L +K+NYP+ + Sbjct: 323 EIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRN---PLLNDIKENYPEIY 379 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRK 276 A ++ +K++ EI ++A++ +ER +K Sbjct: 380 GVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKK 418 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 4/94 (4%) Query: 71 EVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 E++ +R +SL +L + + + H + I R + + L NPLL DI+ YP+ Sbjct: 323 EIINIAERALSLDLSNDKQLLNGLIL----HLRPTINRLKYGLTLRNPLLNDIKENYPEI 378 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 + + + +K LG ++ ++E+G+IA+HL +A Sbjct: 379 YGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAA 412 >UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2G4_CLOB8 Length = 895 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 71 EVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 +VM + II +E LG KL I L H +I R ++N + NP L I+ K Sbjct: 439 DVMDIIEEIILFCEEELGIKLDKKISYGLAVHISNSIDRIRRNKKIVNPKLSSIREENKK 498 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 EF + +AL +I++ + + +P DE GFIAM L Sbjct: 499 EFSVALDALKMIERSIDISMPIDEAGFIAMFL 530 >UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGN0_9FIRM Length = 679 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query: 68 IPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 IP+ + RIIS + R+ D ++Y L DH + ++ R +L NP +I++ Sbjct: 307 IPVLIGEVIYRIIS--RFRINFYLDFALYDLLVDHMKSSVYRMSSGEVLENPFRGEIEKG 364 Query: 127 YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVS 163 YP+ F EE L ++ LGV++P+DEV F+ M+ S Sbjct: 365 YPEVFCTVEECLKPLEDYLGVKVPRDEVSFLVMYFAS 401 >UniRef50_B7GN85 Transcriptional antiterminator, BglG n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GN85_BIFLI Length = 122 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 60/99 (60%) Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +T +++++L +I+ +++ E S++ R +THL++L RI +H ++ E++ ++ Sbjct: 1 MTGVIQQLLAVIESTYNIELDEHSVNVGRFITHLRYLFVRIHQHEQLSKEPEAIISSIMS 60 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +Y +A +CA IA I L+ ++ E+ +L +++ RV Sbjct: 61 SYAKASKCARLIASLIELRLDTMLTEDEVAYLTLHVARV 99 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 28/196 (14%) Query: 90 LQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGV 147 L DS YI L H A++R + +N+ + L ++ +EF+L +E + ++ + Sbjct: 237 LADSAYIGLVVHISLALQRIKNGENITMDKEFLKELS--ITEEFKLAKEIVKGMETDFNM 294 Query: 148 QLPKDEVGFIAMHLVSAQMSG-------NMEDVAGVTQLMREMLQLIKFQFSLNYQEESL 200 +P DEVG+I MH+ A+ N++D+ + ++ +M+ L + +F ++ + + Sbjct: 295 DIPVDEVGYITMHIRGAKQRSSSNHKALNLDDIE-IMEITNKMIDLAEDEFKISLKNDER 353 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQ------QAVKQNYPQAWQCAERIAIFIGLQ 254 ++ L HL SIN + L+ +K Y A+ E+I+ I + Sbjct: 354 LFKDLANHL---------GPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRIIKDK 404 Query: 255 YQ-RKISPAEIMFLAI 269 I +EI ++A+ Sbjct: 405 LNINSIPESEIGYIAM 420 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Query: 70 LEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 +E+M +++I LA++ K + ++ L +H +I R + + NPLL +I+ Sbjct: 327 IEIMEITNKMIDLAEDEFKISLKNDERLFKDLANHLGPSINRLNMGLEIRNPLLDEIKSK 386 Query: 127 YPKEFQLGEEALTIIDKRLGVQ-LPKDEVGFIAMHLVSA 164 Y + E+ II +L + +P+ E+G+IAMH SA Sbjct: 387 YSYAYDGVEKISRIIKDKLNINSIPESEIGYIAMHFASA 425 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 82/162 (50%), Gaps = 8/162 (4%) Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 L DS YI L H A++R Q+ ++ + Q +E+++ E + +++ + + Sbjct: 224 LADSAYIGLVVHIALAMERLQKGDIIHFDDEYKEQIKDEQEYKIAAEVIGHLEEAFSLFI 283 Query: 150 PKDEVGFIAMHLVSAQMSGNM-----EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 P+DE+G+I MHL+ A++ N E + +E+++ + + +++ + Sbjct: 284 PEDEIGYITMHLMGAKLRENQNYLLEESSMDIAYKAKELIRSVSNEMNIDVTHNNRFLND 343 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 L THLK +R+ + +IN+ + +K++Y + ++ ++ Sbjct: 344 LTTHLKPAVYRLKQQMNINN---PMIDEIKKDYIELFEVVDK 382 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 3/89 (3%) Query: 79 IISLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGE 135 I+ AQ+ G KL D+ +++ L +H +I R + ++ + NPLL +++ YP+ +L Sbjct: 325 IMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRNPLLEEMRSAYPELMELAG 384 Query: 136 EALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 +A+ +++ LG LP+ EV +IAMHL +A Sbjct: 385 KAVKPMEQELGEALPEAEVAYIAMHLGAA 413 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/192 (20%), Positives = 92/192 (47%), Gaps = 15/192 (7%) Query: 90 LQDSIYISLTDHCQFAIKRF--QQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGV 147 L D+ +I L H AI+R ++++ + L +++ +E+++ +E I + Sbjct: 224 LSDTAFIGLVVHLSLAIQRMRKKEDIHIDTATLAALRKR--REYRMAKELARRITAQFQT 281 Query: 148 QLPKDEVGFIAMHLVSAQM---SGNMEDVA-----GVTQLMREMLQLIKFQFSLNYQEES 199 ++P+DE+G+I MHL+ A+ G+ E V+ + ++ R +++ + + + Sbjct: 282 EVPEDEIGYITMHLMGARSFYRKGDDEVVSVMDNFHLVRMARSIMKCAQQETGRKLLDNK 341 Query: 200 LSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKI 259 + LV HL R+ H I + L + ++ YP+ + A + + + + Sbjct: 342 ELFLGLVNHLGPSISRLRMHMDIRN---PLLEEMRSAYPELMELAGKAVKPMEQELGEAL 398 Query: 260 SPAEIMFLAINI 271 AE+ ++A+++ Sbjct: 399 PEAEVAYIAMHL 410 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 11/192 (5%) Query: 61 LSELLSH-IPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 +SE L H I LE++ +++ ++ + + D YI L H AI+R +Q + Sbjct: 191 ISERLLHLINLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIEID 250 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 + + KEF+L + ++++LG+ +P+ EVG++ MH+ A+ E + + Sbjct: 251 PSYLSKLKMDKEFELAADLARRLEQKLGMNIPEAEVGYMTMHIRGAKAHIETESLLEESN 310 Query: 179 L-----MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 ++ ++ ++ + +Q+ SL +Q LV HLK +RI E I + L + + Sbjct: 311 FQLGVRVKALIHEVEKSLHVQFQDPSL-FQGLVAHLKPALYRIREKMKIYN---PLLEKI 366 Query: 234 KQNYPQAWQCAE 245 KQ+Y + + + Sbjct: 367 KQDYEELFHVVQ 378 >UniRef50_A0AJH4 Complete genome n=52 Tax=Bacilli RepID=A0AJH4_LISW6 Length = 893 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Query: 78 RIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEE 136 ++ ++A+E+L K + + + + H Q I+R ++ + +P L +I++ YPKEFQ+ + Sbjct: 445 KVYAMAEEKLNRKYNEKMKFAFSLHLQSTIERVREQKHIIHPDLNNIRKKYPKEFQVAID 504 Query: 137 ALTIIDKRLGVQLPKDEVGFIAMHLV 162 +I++ L +++P DE+GF+ M L Sbjct: 505 LSALIEQELSIEIPFDEIGFLTMFLT 530 >UniRef50_UPI000058969F beta-glucoside operon antiterminator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI000058969F Length = 87 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 4/84 (4%) Query: 3 MQITKILNNNVVVV-IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+ITKILNNNVV+ I++++R +VMG+GI F K+ G+ + I+K + L+S E R+ Sbjct: 1 MKITKILNNNVVISKINNEER--IVMGKGIAFGKQNGQELEKDKIDKVFRLTSEE-QERM 57 Query: 62 SELLSHIPLEVMATCDRIISLAQE 85 LL+ I V+ T II A + Sbjct: 58 LTLLNEIDQNVLLTTQDIIIKANQ 81 >UniRef50_B1CAJ2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAJ2_9FIRM Length = 916 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LL + +++ TCD I+ A+ +L KL I I + H + R + N + D Sbjct: 452 LLKIVDAKILDTCDDAINFAEMKLNRKLSSRIKIGMIMHINSLVSRISNGDSIENKKIND 511 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 I PKEF++ + T++++ L +++PK E+GF+ M L + + N++ + Sbjct: 512 IVLNNPKEFKIAKFIFTLLEENLNIKIPKYEIGFLTMFLCAPEKIENIDTIG 563 >UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5V1_9FIRM Length = 671 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 45/73 (61%) Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 +D + ++L +H + +K++Q + PNPLL ++ YP+ F + + + + G+ L Sbjct: 342 RDKLKMNLMNHLKLTVKKYQLQIPSPNPLLAQMKVNYPEIFAVAHQMSQVFEMGTGIPLD 401 Query: 151 KDEVGFIAMHLVS 163 +DE+GFIA+H+ + Sbjct: 402 EDEIGFIAIHIAA 414 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 43/68 (63%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 SL +H + + R + NP+L DI+R +P ++ +E+ T+I + + ++ DE+G+ Sbjct: 343 SLANHLKSVLHRINYGFTITNPILNDIKRTFPYTYKAAKESNTVIKQLMNYEVNDDEIGY 402 Query: 157 IAMHLVSA 164 +A++L+SA Sbjct: 403 LALYLISA 410 >UniRef50_B0NYR0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYR0_9CLOT Length = 165 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 3/60 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNVV D +E ++MG+GIGF+K+ G+ ++ + IEK + L +L+G+ S Sbjct: 1 MIIQKVINNNVVSTFDSNGKEVILMGKGIGFRKKTGDELDKTKIEKIFTL---DLSGKSS 57 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 4/107 (3%) Query: 172 DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA----SINDSDE 227 D++G + ++E++ +I+ + + E +YQR THL++L IL + D Sbjct: 51 DLSGKSSFVQEVMAIIQEFYEIVLDTEHPAYQRFATHLQYLETEILSKKRPIEEDEEDDV 110 Query: 228 SLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++ YP+A+ C+++I I Y K+S E M+L I ++R+ Sbjct: 111 EFYERNQKKYPEAYVCSQKIVEHIEQHYNCKLSADEKMYLIIYVKRL 157 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 34/271 (12%) Query: 16 VIDDQQREKVVMGRGIGFQKRAGERIN-SSGIEKEYALSSHELNGRLSELLSHIPLEVMA 74 V+++ EK ++G QK+A E N G KE+ +L+S I L Sbjct: 167 VLEETANEKELVGFLRQIQKKALEERNLEPGFFKEF-----------DKLVSGIDL---T 212 Query: 75 TCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRF--QQNVLLPNPLLWDIQRLYPKEF 131 + +IS A+++LG + D Y SL H AI R +++ LP L I++ E+ Sbjct: 213 KIESVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQLPEERLKVIKK--SDEY 270 Query: 132 QLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA---QMSGNMEDVAGVTQ--------LM 180 ++ ++ I+++ + +P E+G++ +HL+ A Q G+ + + Q L Sbjct: 271 KIAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLINQDLDQELIILT 330 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +EM+++ + + +++ L HLK RI + + L VK Y + Sbjct: 331 KEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKN---PLLLDVKSRYGEI 387 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ A+R A + + Q+ IS EI ++ +++ Sbjct: 388 FKAAKRAAKILQSKLQKSISSDEIGYITLHL 418 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query: 71 EVMATCDRIISLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 E++ ++ +A++ LG KL D + I L H + I R + ++ L NPLL D++ Y Sbjct: 325 ELIILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKNPLLLDVKSRY 384 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 + F+ + A I+ +L + DE+G+I +HL +A Sbjct: 385 GEIFKAAKRAAKILQSKLQKSISSDEIGYITLHLGAA 421 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 39/68 (57%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 L H A+ R + + + NPLL DI+ YP F+ ++ K+L + +P+DEVG+ Sbjct: 338 GLKSHLVPAVYRLEMGLDIRNPLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGY 397 Query: 157 IAMHLVSA 164 IAMH +A Sbjct: 398 IAMHFGAA 405 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/183 (19%), Positives = 89/183 (48%), Gaps = 9/183 (4%) Query: 92 DSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 +S Y+ L H AIKR Q + + + L ++++ E++ ++ + + L + + Sbjct: 224 ESSYLGLVVHLALAIKRLQNGETIEMGEDNLQELKK--TNEYKFAKKLAKYLQEELDIPI 281 Query: 150 PKDEVGFIAMHLVSAQMSGNMEDV--AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 P+DE+G++ +HL+ A+ ++ + + R+M++ + F +++ E+ L + Sbjct: 282 PEDEIGYVTIHLIGAKYRSTTQNYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKS 341 Query: 208 HLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFL 267 HL +R+ I + L + +K YP ++ + R+ + + I E+ ++ Sbjct: 342 HLVPAVYRLEMGLDIRN---PLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYI 398 Query: 268 AIN 270 A++ Sbjct: 399 AMH 401 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 93/198 (46%), Gaps = 12/198 (6%) Query: 79 IISLAQERLGKLQDSIYISLTDHCQFAIKRFQQN-VLLPNPLL-WDIQRLYPKEFQLGEE 136 +I+L E++ L DS Y L H AI R N ++ P+ L DI+ + +++ L Sbjct: 219 LINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDIE--HDRDYSLAVI 276 Query: 137 ALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-----VTQLMREMLQLIKFQF 191 + ++K +++P+ EV +I +H+ +++M + + L+ EM++ Sbjct: 277 IASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMIEAYDPDI 336 Query: 192 SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFI 251 S +++ L+ H++ R+ +I + L +K +YP ++ +++ + Sbjct: 337 SYILEQDDAFIDGLIAHMQPTLVRLTNGLAIRN---PLLDQIKSDYPDIFKKCKKVTAML 393 Query: 252 GLQYQRKISPAEIMFLAI 269 + K+ +E FLA+ Sbjct: 394 EEKLNLKVPESETGFLAV 411 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 91 QDSIYIS-LTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 QD +I L H Q + R + + NPLL I+ YP F+ ++ +++++L +++ Sbjct: 342 QDDAFIDGLIAHMQPTLVRLTNGLAIRNPLLDQIKSDYPDIFKKCKKVTAMLEEKLNLKV 401 Query: 150 PKDEVGFIAMHLVSA 164 P+ E GF+A+H +A Sbjct: 402 PESETGFLAVHFGAA 416 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%) Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLP-NPLLWDIQRL-YPKEFQLGEEALTIIDKRLGV 147 + DS YI+ H AI+R +Q + +P D+Q L KE+++ +++ G+ Sbjct: 225 MADSSYIAFVVHLALAIERIKQGEAIHFDP--RDLQALQATKEYEIARVLAESLERAFGI 282 Query: 148 QLPKDEVGFIAMHLVSAQ---MSGNMEDVAGVTQLMREMLQLIKF---QFSLNYQEESLS 201 +P +EVG++ MHL+ A+ G M + + M+ QLI+F + ++ + Sbjct: 283 DIPNEEVGYMTMHLMGAKWRSRQGAMMEEPSLAVGMKAQ-QLIRFVSDKLGVDLSTDRTL 341 Query: 202 YQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 Y+ LV HLK +R LEH + ++ L Q +KQ+Y + Sbjct: 342 YEDLVVHLKPALYR-LEHG-MGVANPLLDQ-IKQDYAE 376 >UniRef50_A6LWC3 Sigma-54 factor, interaction domain-containing protein n=4 Tax=Clostridia RepID=A6LWC3_CLOB8 Length = 995 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 EL + I +++ +++ +A++ + +Q++ Y + H +R +Q ++ NP Sbjct: 511 ELKNIIDEKILNVVEKVTDIAKQYIENIQENFYYCVAMHLNSTYERLKQGRIVRNPESDY 570 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVS-AQMSGNMEDVA 174 I++ Y E+++ + I+ L ++LP+DE+GFIAM+L + +++ N+ VA Sbjct: 571 IKKEYYNEYRIAKILTKEINNSLDIELPEDEIGFIAMYLKTFSEVDKNVSRVA 623 >UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWK7_STRM9 Length = 628 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 10/130 (7%) Query: 146 GVQLPKDEVGFIAMHLVSAQM----SGNMEDVAGVTQLMREMLQLIKFQFSLN-YQEESL 200 V L +++ +I +H ++++ S ED+ V +++E++ +K F ++ Y +E L Sbjct: 254 NVDLDSNDIEYITIHFLTSETLTYKSLKTEDINEVNDIIQELIYYVKLTFKIDLYNDEEL 313 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQY-QRKI 259 Y+ L TH+ L RI I + L + +K+N P + A + I ++ +R + Sbjct: 314 -YKNLYTHILALCIRIRFGIKIKN---PLLEDIKKNMPLEYNVATYVCNLISKRFNKRSL 369 Query: 260 SPAEIMFLAI 269 S AEI F+A+ Sbjct: 370 SEAEIGFIAV 379 >UniRef50_B0MED2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MED2_9FIRM Length = 908 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LL I +V + I+ A+ +LG K+ + I + + H +R + ++L L D Sbjct: 440 LLKIIDAKVYYAVEDILQFAEIKLGRKMPERIKVGIAMHVNAMTERISKGIMLKEKELND 499 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVS 163 I +P+EFQ + L ++++ LG+Q+PK E+G+ M L + Sbjct: 500 IVLNHPQEFQTAKVMLRLLEEELGIQVPKQEIGYFTMFLCA 540 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 46/249 (18%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRF 109 YAL + + R+ E+L+ + E + RL L +S Y +L H A++R Sbjct: 198 YALLATDTVSRVYEVLARMRKE------------ETRLKGLAESAYTNLIFHLAIAVERV 245 Query: 110 QQNVLLP-NPLL------WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV 162 ++ ++ +P L WD E+ L + I++ + +P E+ +I +HL+ Sbjct: 246 KKGAIVEEDPGLVNKLGTWD-------EYALAGKIRGEIEREFSIHMPDQELSYILLHLL 298 Query: 163 SAQMSGNMEDVAGVTQLMRE--MLQLIKF---QF------SLNYQEESLSYQRLVTHLKF 211 ++M+ + + L E +L++I QF SL EE + + L+ HL+ Sbjct: 299 GSKMAYHETEAENRQFLFPEEDLLEIIDRMIDQFDTEMANSLKCDEEFI--RGLIMHLQP 356 Query: 212 LSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN- 270 +R+ E SI + + +K+ YP+ + + R A I + ++S EI FL+++ Sbjct: 357 AMFRMSEKMSIYNP---VLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHF 413 Query: 271 ---IERVRK 276 +ERVRK Sbjct: 414 GAAVERVRK 422 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/279 (18%), Positives = 125/279 (44%), Gaps = 29/279 (10%) Query: 18 DDQQREKVVMGRGIGFQKRAGERINSSGIEK-----------EYALSSHELNGRLSELLS 66 D ++ K++ G I Q + I + G EK E S + +L Sbjct: 128 DLKEVRKLLEGNNIKLQSEKSKGIKAIGDEKNLRKVVSNLMLENVADSDLIGVNFKKLFK 187 Query: 67 HIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDI 123 + +E + +I A+++L L D + +L H AIKR + +++++ + L ++ Sbjct: 188 DMDIEFIGN---VIKTAEDQLESTLSDYSFNNLLIHIAIAIKRIELAKDIVMDDNELKNL 244 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM---SGNMEDVAGVTQLM 180 + EF + +++ R +++PK E+G++ +HL+ + + +D+ + + Sbjct: 245 SKTC--EFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNVMLKEEKNDDLVYIQLIS 302 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ + + N++ + + L+ H++ + +R+ SIN+ L + Y + Sbjct: 303 ATLISEVGKRTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSINN---PLLDEIIYKYKEV 359 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAI----NIERVR 275 + E IF+ +IS EI ++ + ++ER++ Sbjct: 360 FTLVEESLIFLEKDLNAEISKEEIGYITLHFMASLERIK 398 >UniRef50_A7GUY2 Sigma-54 factor interaction domain-containing protein n=5 Tax=Bacillus cereus group RepID=A7GUY2_BACCN Length = 897 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Query: 72 VMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 +++ C++I SL ++ L K D ++++L H Q ++R + + +P L I+ Y + Sbjct: 436 IVSVCEKIASLVEKHLSKTFDEKVFLALNLHVQTTLQRIRSGKQIHHPQLNQIRTKYKEA 495 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 F + + L +++ L + +P DE GF+ M V + + +V Sbjct: 496 FSVAMKCLQVLEDELQITMPIDEAGFLTMFFVVDPLPASQAEV 538 >UniRef50_A9VR47 PTS system transcriptional activator n=75 Tax=Bacillus RepID=A9VR47_BACWK Length = 892 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 72 VMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 +++ C++I LA++ L K D ++++L+ H Q ++R Q + +P L I+ Y + Sbjct: 438 IVSVCEKIAELAEKYLSKTFDEKVFLALSLHVQTTLQRLQGGKQIHHPQLNQIRTKYKEA 497 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 F + + + ++++ L + +P DE GF+ M V + + +V Sbjct: 498 FSVAMQCIQLLEEELQITIPIDEAGFLTMFFVVDPIPASQTEV 540 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 21/129 (16%) Query: 51 ALSSHELNGRL-SELLSHIPLEVMATCDRIISLAQ--------ERLGKL------QDSIY 95 A+ E+N RL E +++I + ++A +SLA ERL +L + Sbjct: 267 AMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQHSMIPIPERLKELLHPFGYDRDLL 326 Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIID---KRLGVQLPKD 152 LT H Q A+KR + N + NP DI+R YP+ F +EAL + D + + + D Sbjct: 327 FGLTVHMQAAVKRLRVNAGISNPYTEDIKRNYPQAF---DEALIVSDDYERTEHISMNDD 383 Query: 153 EVGFIAMHL 161 EV ++A+H+ Sbjct: 384 EVAYVALHI 392 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 31/218 (14%) Query: 67 HIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQR 125 +I V+ R++ A E+LG L + SL H AI R + NP+ + Sbjct: 195 NIDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAG----NPIGQNDDL 250 Query: 126 LYPKEFQLGEEAL---TIIDKRLGVQLPKDEVGFIAMHLVSAQMS----GNMEDVAGVTQ 178 + + EA+ +++K + V+LP +E+ +I +HL++A + N + + + Sbjct: 251 IRNIGNERKSEAVQLAAMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQHSMIPIPE 310 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++E+L + L + L H++ R+ +A I++ + +K+NYP Sbjct: 311 RLKELLHPFGYDRDLLFG--------LTVHMQAAVKRLRVNAGISN---PYTEDIKRNYP 359 Query: 239 QAWQCAERIAIFIGLQYQR----KISPAEIMFLAINIE 272 QA+ A+ + Y+R ++ E+ ++A++IE Sbjct: 360 QAFDE----ALIVSDDYERTEHISMNDDEVAYVALHIE 393 >UniRef50_Q185K2 Putative sigma-54 interacting transcription antiterminator n=9 Tax=Clostridium difficile RepID=Q185K2_CLOD6 Length = 979 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 65 LSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 L LE+M D++I +E+ + +Y++L H + AI R + + NP L I+ Sbjct: 493 LKESTLEIM---DKVIVFIKEQFKHVNQGLYLALAIHIEHAIGRIKDGKTIINPSLDKIK 549 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 P E++L + I++ V P+DE+G++A ++ Sbjct: 550 ASMPMEYELSRYIMGIVEDLTQVTFPEDELGYLAYYI 586 >UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQT2_CLOB8 Length = 674 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 91 QDSIYI-SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 QD+ +I L H + I R Q + + NP +I+RLYP+ ++ E A+ +I+ + +++ Sbjct: 318 QDTEFIRGLIAHIRPTIIRLQHGIEIQNPFQNEIKRLYPQIYEKAERAVKVIESKYNLKV 377 Query: 150 PKDEVGFIAMHLVSAQM 166 P E+G +A+H A++ Sbjct: 378 PAQELGLLAIHFGGAEI 394 >UniRef50_A6QKC9 Transcriptional antiterminator BglG family protein n=61 Tax=Staphylococcus RepID=A6QKC9_STAAE Length = 624 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 72 VMATCDRIISLAQERLGKL--QDSIYI-SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 + + DR+I L Q+R+ +DSI +L +H A R QN+ L NPL+ +I++LYP Sbjct: 279 IQSYIDRLIELMQQRIHVPFNEDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYP 338 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 F EA+ + +++ +DE+ F+ +H +A Sbjct: 339 FVFNTLFEAIDKLAIDTDIEMSEDEIAFLTIHFQAA 374 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 9/113 (7%) Query: 49 EYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKR 108 E AL+S ++ + EL+ +I ++ I+ +D + + L H F + R Sbjct: 315 ECALNSSRISKNIDELMENIFNQIYVDMGIFIN---------EDELRVGLGYHLSFTLNR 365 Query: 109 FQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 N+ L N LL +I++ Y F+L + A +I+K+ +++ +DE+G+IA+H Sbjct: 366 LLFNIKLKNVLLEEIKQNYILPFKLAQIAGKVIEKKYNLEVSEDEIGYIAIHF 418 >UniRef50_A4IML7 Regulatory protein n=10 Tax=Firmicutes RepID=A4IML7_GEOTN Length = 953 Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 71 EVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 +V+A + ++ +++LG+ L + +L H Q AI R + ++ +P L +++ Y Sbjct: 494 DVLALTEAMVVYVEKKLGRRLAKKVTYALALHIQTAINRLRAGTIVSHPKLNEVRAAYKH 553 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAM 159 EF + + L ++++++ + LP DE GF+ M Sbjct: 554 EFAVALDCLHLMEEKMHIDLPIDEAGFLTM 583 >UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMM5_SEBTE Length = 655 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 24/225 (10%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIY-ISLTDHCQFAIKRFQQ-NVLLPNP 118 L EL E + +I+ +++L IY I++ H IKR + N+L N Sbjct: 194 LYELFGQFGREEVEAVAKILKDTEQKLNYTMGEIYYINMITHILILIKRLRNGNILYENK 253 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM---------SGN 169 + DI++ + + + +E I + +++P++E FI +L+S+ M S Sbjct: 254 MRRDIRKTDKRIYTISQEMSGKITETFKIEVPEEETYFIYQYLISSGMEIINAGTDTSEL 313 Query: 170 MEDVAGVT-----QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND 224 + D + V +++R++ +++ F+ + + Q Y+ L+ HLK + R+ + SI + Sbjct: 314 LLDTSPVIMEIAEEIIRKISEIVDFKLTPDKQ----LYESLILHLKAMMNRLKYNISIKN 369 Query: 225 SDESLQQAVKQNYPQAWQCAERIAIFIGLQYQ-RKISPAEIMFLA 268 + + +K+ + + + + +Y R ISP EI +L Sbjct: 370 ---PILEDIKKEFSAIYGLVGLVTLDTLEKYNIRAISPDEIGYLT 411 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 44/69 (63%) Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVG 155 + L+ H + AI RF+ + + NP L DI+R YP F+ G + ++ G+++ +DE+G Sbjct: 327 VGLSLHLRSAIHRFRYGMNIRNPYLTDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIG 386 Query: 156 FIAMHLVSA 164 ++A+H+ +A Sbjct: 387 YLALHIGAA 395 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 19/196 (9%) Query: 97 SLTDHCQFAIKRFQQN--VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 +L H A KR ++ V++P L +IQ + P FQ+ ++ I LG++ P E+ Sbjct: 213 NLVTHIAIACKRIEEKKIVMMPETELKEIQ-VQPV-FQVAQQMAEDIRHVLGIEFPLSEM 270 Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQLMRE--------MLQLIKFQFSLNYQEESLSYQRLV 206 +IA+HL+ A+M + + L+ E +L ++ SLN Q + L Sbjct: 271 AYIAIHLMGAKMMAYGDAGHTLFHLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVGLS 330 Query: 207 THLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMF 266 HL+ R +N + L +K++YP A++ + ++ + +I EI + Sbjct: 331 LHLRSAIHRF--RYGMNIRNPYLTD-IKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGY 387 Query: 267 LAIN----IERVRKEH 278 LA++ IER + +H Sbjct: 388 LALHIGAAIERTKSQH 403 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 10/112 (8%) Query: 51 ALSSH-ELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRF 109 +S H E+ +S L++HI + I+L L+D +Y H F + R Sbjct: 276 GISPHVEITEEVSNLVNHILERIKYDMGLNITLDD----ILKDFVY-----HMAFLVNRL 326 Query: 110 QQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 + V + NP++ +I++ Y +++ E A +I+K L V++ +DEVGFIA + Sbjct: 327 KYGVHIHNPIVDEIRKKYKVAYKMAELARDVIEKSLDVKMTQDEVGFIAAYF 378 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%) Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-------VTQLMRE 182 EF L ++KRL + +P E F+A+ ++ N+E ++ V+ L+ Sbjct: 234 EFTLVNTISDAVEKRLTISIPIKERIFLALPIIGMNTPTNIEGISPHVEITEEVSNLVNH 293 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L+ IK+ LN + + + V H+ FL R+ I++ + +++ Y A++ Sbjct: 294 ILERIKYDMGLNITLDDI-LKDFVYHMAFLVNRLKYGVHIHN---PIVDEIRKKYKVAYK 349 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLA 268 AE I K++ E+ F+A Sbjct: 350 MAELARDVIEKSLDVKMTQDEVGFIA 375 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 12/112 (10%) Query: 86 RLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKR 144 +LG L D + I L H + AI R + + L NP+L I+ YP F+ G A +I ++ Sbjct: 317 KLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAIKEHYPLAFEAGIIAGIVIKEQ 376 Query: 145 LGVQLPKDEVGFIAMHLVSAQMSGNMEDV-----------AGVTQLMREMLQ 185 G+++ ++E+G++A+H +A E AG QL+RE L+ Sbjct: 377 TGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIVCASGAGSAQLLREKLR 428 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 14/163 (8%) Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ---MSGNMEDVAGV----TQ 178 L+ KE+Q E + ++ +L V PKDE +I MHL+ + S ED + Q Sbjct: 244 LHQKEYQAAEAIVKELESKLSVTFPKDETAYITMHLLGTKRMTQSQCGEDTFSIEEETDQ 303 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L M++ + + L + L H+K R +N + L A+K++YP Sbjct: 304 LTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISR--NRYGMNLRNPML-AAIKEHYP 360 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKE 277 A++ I I Q +I EI +LA++ IER + E Sbjct: 361 LAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTE 403 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 15/210 (7%) Query: 79 IISLAQERLG--KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEE 136 II L + R G KL D + +L H ++KR + + W + Y +E ++ E+ Sbjct: 199 IIVLDECREGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQLDSWSMDE-YREEGKIAEK 257 Query: 137 ALTIIDKRLGVQLPKDEVGFIAMHLVS-AQMSGNMEDVAGVTQLMREMLQLI----KFQF 191 L + G++ PK+EV +I +HLVS + N + V Q +R+ L + F Sbjct: 258 ILKRVYHSTGLKFPKEEVDYITLHLVSKGNLQTNKCEKEDVAQQIRKQLLFVLEQSNFTH 317 Query: 192 SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFI 251 ++ + + LV HL L R+ H + D L ++ +Y + I + Sbjct: 318 EYPFKNDFQLIEGLVAHLSTLFVRLKNHVKM---DNPLLAEIQNHYAGVLEMTGNILSAM 374 Query: 252 GLQYQRKISPAEIMFLAI----NIERVRKE 277 + K+S E+ ++A+ ++ER++++ Sbjct: 375 PIFANEKLSADEVAYVALHFMTSLERLKEK 404 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 43/282 (15%) Query: 29 RGIGFQKRAGERINSSGIEKEYA--LSSHELNGRLSELLSHIPL-EVMATCDRIISLA-Q 84 RG G + + E I + A L HEL G + E + + L ++ + +R++ L + Sbjct: 145 RGYGVELQGTESSKRRAISRLIAEHLDDHELIGIIKENIQNKALRDIDSIAERLLGLIDR 204 Query: 85 ERLGK---------------LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY-- 127 E+L K L DS Y+ L H A++R ++ + +D L Sbjct: 205 EKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKG----EGIHFDEHTLSEL 260 Query: 128 --PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV--TQLM--- 180 E+++ + + + +++P DE+G+I MHL A++ + +D T+LM Sbjct: 261 NGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPDDQVWPENTELMVIT 320 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +Q + + + ++ + L+THL+ +R+ I + + + +KQNYP+ Sbjct: 321 KRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRN---PILEQIKQNYPEL 377 Query: 241 WQCAERIAIFIGLQYQRKISPAE-----IMFLAINIERVRKE 277 + A+ L R P E +M L +ER R E Sbjct: 378 FAVTSE-AVHTILPELR--VPDEEIGYLVMHLGAALERTRHE 416 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Ent... 310 4e-83 UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmi... 309 1e-82 UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Ba... 307 2e-82 UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 295 8e-79 UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus ... 294 3e-78 UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Strepto... 291 2e-77 UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-bind... 290 5e-77 UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dic... 289 9e-77 UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostri... 289 1e-76 UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enteroco... 289 1e-76 UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminoc... 288 1e-76 UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Fi... 288 1e-76 UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exi... 288 2e-76 UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostri... 286 4e-76 UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Act... 284 2e-75 UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Strept... 283 3e-75 UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Ac... 282 7e-75 UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaeros... 282 7e-75 UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Ent... 282 1e-74 UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerot... 282 1e-74 UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacte... 280 4e-74 UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillu... 280 5e-74 UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostr... 278 1e-73 UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostri... 278 1e-73 UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes... 278 2e-73 UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Ent... 275 8e-73 UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Ba... 275 8e-73 UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdema... 275 1e-72 UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Ent... 275 1e-72 UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridial... 273 5e-72 UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Ent... 272 9e-72 UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 ... 271 2e-71 UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Seb... 271 2e-71 UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 T... 270 4e-71 UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 270 4e-71 UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collins... 269 7e-71 UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacill... 269 9e-71 UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nak... 268 2e-70 UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes ... 267 3e-70 UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clo... 267 3e-70 UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Cl... 266 5e-70 UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdol... 266 8e-70 UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB 265 1e-69 UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria... 264 2e-69 UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterm... 263 4e-69 UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Art... 263 5e-69 UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=The... 263 6e-69 UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Ent... 262 7e-69 UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 T... 262 7e-69 UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Ta... 262 8e-69 UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostr... 262 1e-68 UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria... 262 1e-68 UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus Rep... 261 2e-68 UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidob... 261 2e-68 UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium... 260 4e-68 UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6... 259 8e-68 UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=The... 259 8e-68 UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridial... 259 9e-68 UniRef50_P15401 Levansucrase and sucrase synthesis operon antite... 258 1e-67 UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7V... 258 2e-67 UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG fa... 258 2e-67 UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clo... 257 3e-67 UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lac... 257 5e-67 UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 T... 256 7e-67 UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-bind... 255 1e-66 UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-bind... 253 3e-66 UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria m... 253 4e-66 UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ7... 253 5e-66 UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collins... 253 7e-66 UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcu... 252 8e-66 UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecali... 252 1e-65 UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clo... 252 1e-65 UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leu... 251 2e-65 UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaeros... 251 3e-65 UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=... 250 3e-65 UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillacea... 250 3e-65 UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 T... 250 4e-65 UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bac... 250 4e-65 UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Ent... 250 4e-65 UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococ... 249 9e-65 UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator... 247 3e-64 UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mu... 246 7e-64 UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=... 245 9e-64 UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=La... 244 3e-63 UniRef50_A3CN37 Transcriptional antiterminator, BglG family, put... 244 3e-63 UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Coryneb... 243 3e-63 UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacte... 243 4e-63 UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Ba... 243 5e-63 UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostri... 243 5e-63 UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacill... 243 5e-63 UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Cl... 243 6e-63 UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Cor... 243 6e-63 UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus... 243 6e-63 UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax... 242 7e-63 UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium... 242 9e-63 UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecali... 241 2e-62 UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exi... 240 4e-62 UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Cor... 240 4e-62 UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collins... 240 5e-62 UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 T... 239 7e-62 UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridi... 239 8e-62 UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillacea... 238 1e-61 UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9... 238 2e-61 UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Pae... 237 3e-61 UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium... 237 5e-61 UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12... 236 6e-61 UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clo... 236 6e-61 UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 T... 236 7e-61 UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdema... 236 7e-61 UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax... 235 2e-60 UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macroco... 235 2e-60 UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 ... 235 2e-60 UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostri... 233 4e-60 UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminoc... 233 5e-60 UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 T... 233 5e-60 UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collins... 233 5e-60 UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostri... 233 5e-60 UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Seb... 232 7e-60 UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdema... 232 8e-60 UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 T... 232 8e-60 UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdema... 232 8e-60 UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax... 231 1e-59 UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12... 231 2e-59 UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collins... 231 2e-59 UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillale... 231 3e-59 UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exi... 230 3e-59 UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdema... 230 4e-59 UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pedioc... 230 5e-59 UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 ... 230 5e-59 UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria gr... 229 8e-59 UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysip... 229 8e-59 UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collins... 228 2e-58 UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobac... 227 3e-58 UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacill... 226 4e-58 UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 T... 226 5e-58 UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdema... 226 5e-58 UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lac... 226 6e-58 UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostri... 225 1e-57 UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1... 225 1e-57 UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacte... 225 2e-57 UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactob... 224 2e-57 UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 T... 223 3e-57 UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridi... 223 4e-57 UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria Re... 223 7e-57 UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Str... 222 8e-57 UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clo... 222 1e-56 UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostri... 221 1e-56 UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacter... 220 3e-56 UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostr... 220 4e-56 UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bac... 220 6e-56 UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 ... 219 8e-56 UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdema... 219 1e-55 UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Bla... 219 1e-55 UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Sub... 218 1e-55 UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Ent... 218 1e-55 UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdema... 218 2e-55 UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphyloc... 216 5e-55 UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-bind... 216 5e-55 UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria ... 216 6e-55 UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collins... 216 7e-55 UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium ... 215 1e-54 UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicu... 215 2e-54 UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acn... 214 3e-54 UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobaci... 213 4e-54 UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Strep... 212 9e-54 UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Strep... 212 1e-53 UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacte... 211 1e-53 UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lacto... 210 4e-53 UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Ta... 210 5e-53 UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiter... 209 1e-52 UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax... 208 2e-52 UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Seb... 204 2e-51 UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus Rep... 203 6e-51 UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 T... 202 1e-50 UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacill... 199 1e-49 UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacill... 198 1e-49 UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_... 194 2e-48 UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriace... 194 2e-48 UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysi... 194 3e-48 UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lac... 188 2e-46 UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacte... 188 3e-46 UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collins... 185 2e-45 UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostri... 179 1e-43 UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bac... 178 2e-43 UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminoc... 177 4e-43 UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator... 175 1e-42 UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonel... 174 4e-42 UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=... 170 3e-41 UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 ... 167 3e-40 UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bif... 160 4e-38 UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebac... 154 4e-36 UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) ... 153 6e-36 UniRef50_A0FL05 Putative transcriptional antiterminator (Fragmen... 151 4e-35 UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=... 150 4e-35 UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Strepto... 148 3e-34 UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alk... 146 9e-34 UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Cl... 139 9e-32 UniRef50_D0Z7Y6 Transcriptional antiterminator n=1 Tax=Edwardsie... 139 1e-31 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 136 6e-31 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 134 3e-30 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 132 1e-29 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 132 2e-29 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 131 2e-29 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 131 3e-29 UniRef50_C4VQU1 Cryptic beta-glucoside bgl operon antiterminator... 131 3e-29 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 131 4e-29 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 130 4e-29 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 129 1e-28 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 128 2e-28 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 127 3e-28 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 126 1e-27 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 124 3e-27 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 124 3e-27 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 124 4e-27 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 124 4e-27 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 123 5e-27 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 123 6e-27 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 122 1e-26 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 121 2e-26 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 121 3e-26 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 121 4e-26 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 120 4e-26 UniRef50_A8R873 Putative uncharacterized protein n=1 Tax=Eubacte... 118 2e-25 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 117 3e-25 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 117 3e-25 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 117 3e-25 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 114 5e-24 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 113 5e-24 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 113 8e-24 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 112 1e-23 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 110 6e-23 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 108 2e-22 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 108 2e-22 UniRef50_Q5WDQ4 BglG family transcriptional antiterminator n=1 T... 108 2e-22 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 108 3e-22 UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 107 6e-22 UniRef50_B3WBC3 LicR (Transcriptional regulator) n=1 Tax=Lactoba... 107 6e-22 Sequences not found previously or not previously below threshold: UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 119 8e-26 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 117 5e-25 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 115 1e-24 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 115 2e-24 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 113 6e-24 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 112 1e-23 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 111 3e-23 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 111 3e-23 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 110 4e-23 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 107 3e-22 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 107 3e-22 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 107 4e-22 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 106 1e-21 >UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Enterobacteriaceae RepID=C6DCM5_PECCP Length = 278 Score = 310 bits (794), Expect = 4e-83, Method: Composition-based stats. Identities = 106/274 (38%), Positives = 181/274 (66%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KIL+NN V+V+ D +RE V +G+G+GF K+ G+ I+ IE ++ S + LS Sbjct: 1 MIIKKILSNNAVLVLADDRREIVAIGKGVGFGKKVGDPIDQQRIESQFVKKSDGMADVLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP + +A +II+LAQ+ L +QD+++++L+DH FAI+R ++ + N +LW Sbjct: 61 QLLADIPPDCLAVTQQIITLAQKTLRLNVQDTLFLALSDHINFAIQRHKKGQTIKNLMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++ Y EF +G EAL +I RLG+ LP+DE GFIA+HL +A + +M+ +++ Sbjct: 121 DIRQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLANATNNSDMQSTMQSAGIIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ + + E SL+YQRLVTHLKF + R+L +++ D+S+ Q + + P+A+ Sbjct: 181 DILTILKYDLHITFDEHSLNYQRLVTHLKFFALRLLNRETVSHGDDSIYQGITEMMPRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 CA ++ ++ Y +++ EIMFL I+I R++ Sbjct: 241 ACAMKVYDYVEKNYGCQLTTDEIMFLTIHINRLQ 274 >UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmicutes RepID=LICT_BACSU Length = 277 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 117/276 (42%), Positives = 193/276 (69%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNNV+ V+++Q +E VVMGRG+ FQK++G+ ++ + IEK + L + +++ + Sbjct: 1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTLDNKDVSEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP+E M + IIS A+ +LGK L DSIY+SLTDH FAI+R Q+ + + N LLW Sbjct: 61 TLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +RLY EF +G+EAL ++ + GV LP+DE GFIA+H+V+A+++ M ++ +T++M+ Sbjct: 121 ETKRLYKDEFAIGKEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+ F + + EESL Y R VTHLKF + R+ + D+ L VK+ Y +A+ Sbjct: 181 EILSIVKYHFKIEFNEESLHYYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +C ++I +I +Y+ K++ E+++L I+IERV K+ Sbjct: 241 ECTKKIQTYIEREYEHKLTSDELLYLTIHIERVVKQ 276 >UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Bacteria RepID=ARBG_ERWCH Length = 283 Score = 307 bits (787), Expect = 2e-82, Method: Composition-based stats. Identities = 149/276 (53%), Positives = 207/276 (75%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV V+D+Q E+VVMGRG+GF+KR G+ +N++ IEK ++L S EL RLS Sbjct: 1 MKIAKILNNNVVTVMDEQNNEQVVMGRGLGFKKRPGDTVNAALIEKIFSLRSSELTARLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L IPLEV+ T DRII+LA+E+LG LQ+S+YISLTDHC FAI+R +Q V + N L W Sbjct: 61 DVLERIPLEVVTTADRIIALAKEKLGGNLQNSLYISLTDHCHFAIERHRQGVDIRNGLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++RLY KEF +G +AL II +RLGV+LP+DE GFIA+HLV+AQ+ +M +V +T++M+ Sbjct: 121 EVKRLYQKEFAIGLDALDIIHRRLGVRLPEDEAGFIALHLVNAQLDSHMPEVMRITRVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+Q +L+Y E++ SY R VTHLKF + R+L + DESL VK+ Y A+ Sbjct: 181 EILNIVKYQLNLDYNEQAFSYHRFVTHLKFFAQRLLGRTPVFSEDESLHDVVKEKYTLAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 CAE+I I L Y ++ E+MFLAI+IERVR E Sbjct: 241 HCAEKIQDHIMLHYDYTLTKEELMFLAIHIERVRSE 276 >UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 Length = 285 Score = 295 bits (757), Expect = 8e-79, Method: Composition-based stats. Identities = 106/278 (38%), Positives = 179/278 (64%), Gaps = 2/278 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNNVV+ +E VVMGRG+ FQK+ G+ + IEK + + +HEL+ +LS Sbjct: 1 MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKLGDEVEVPKIEKTFVMETHELSEKLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPL+ + D ++ AQE L L D+IY++LTDH FA+ R+ Q + L N LLW Sbjct: 61 ELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHINFAVSRYNQGINLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+R Y E+ +G +AL I++ +G++L +DE GFIA+H+V+A+ G M +TQ++ Sbjct: 121 EIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHIVNARQDGQQMHMTVAMTQIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L ++ + + + E SL+Y R +THL++ + R+L ++ D+ L + V+ YP+A Sbjct: 181 QDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLRKEIVDSGDDFLYEQVQIKYPEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C ++I ++ + +++ E ++L I+I RV + + Sbjct: 241 FNCTKKIDAYLLNTHHTELTRDERVYLTIHIYRVTERN 278 >UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus RepID=A8F9J0_BACP2 Length = 278 Score = 294 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 104/275 (37%), Positives = 188/275 (68%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+LNNNV+ VID+Q +E VVMGRGI FQ+R G+ ++ S I+K + L H ++ R+ Sbjct: 1 MQIQKVLNNNVISVIDEQGKEIVVMGRGIAFQRRPGDPVDESLIDKVFRLEDHSVHERMK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL +P +V+ + +I A +L + L +S+++SL DH +AI+R ++N L+ N L+W Sbjct: 61 MLLLEVPYDVVKVTEEMIQYAHTKLNRRLNESLHVSLADHIHYAIERLKKNHLIENSLIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+RLY EF + ++ L +I++RL ++LP+DE GFIAMH+++A+++ +M +T+ + Sbjct: 121 EIKRLYKDEFLVAKDCLEMIEERLHIELPEDEAGFIAMHIINAELNEDMNTTVNITKEVN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L ++K+ ++ + E+SL++ R +THL+F R++ + D+ L Q +K YP+A+ Sbjct: 181 AILTIVKYHLNMEFDEDSLNFYRFLTHLRFFVQRLINETILVSEDQDLYQLIKVKYPKAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +CA++IA ++ Y R ++ E+++L+I++ R+ K Sbjct: 241 ECAKKIAEYVYQTYHRDLTSEEMLYLSIHLNRLIK 275 >UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Streptococcus RepID=C5WHP5_STRDG Length = 288 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 168/276 (60%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +M I K+ NNNV+ V DD +E +VMGRG+GFQK+ G+ I+ IEK + + + + L Sbjct: 4 HMIIEKVYNNNVIQVRDDSDQELIVMGRGLGFQKKIGDAIDQRKIEKTFTFQNQQTSADL 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L +P E + +I A++ LG +++++SLTDH F + R +Q V + NPL Sbjct: 64 SDLYEQLPDEELNLFISLIDQAEQSLGLTFDENLHLSLTDHLHFMVVRVRQGVSISNPLA 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W++++ Y +E+Q+ +E L + K+L + +P DE IA+HL++AQ + + T+L Sbjct: 124 WEVRKFYAQEYQVAKEMLVHLRKKLALDIPDDEAASIALHLINAQTETDGISKSQRTTRL 183 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L++++ F E+S+SY R VTHL++ S R++ +D L VKQNYP Sbjct: 184 VIDILEIVRLHFGKLVSEDSISYNRFVTHLQYFSQRVVNGVVQGSNDAFLYDQVKQNYPN 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ C ++IA ++ Y +S E ++L I+I+R++ Sbjct: 244 SFICTQKIAHYVKENYDFDMSVDEKVYLTIHIQRMK 279 >UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-binding protein n=38 Tax=Enterococcus RepID=C9B3C8_ENTFC Length = 283 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 178/277 (64%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV+ + E V MGRG+ FQK+ G+ I+ ++KE+ L + Sbjct: 1 MKIDKILNNNVVISKNGFGEEVVCMGRGLAFQKKIGDEISPEAVQKEFILRDSFAKNQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L++ IP E + +++ A+++L + +IY++LTDH +AI R ++N+ LPNPLL+ Sbjct: 61 QLMADIPAEEIEWVKQVVEQAEDKLKVEFSPNIYLTLTDHLHYAITRAKENIQLPNPLLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 + ++ YPKE+Q +EAL + ++ GV+L +DE GFIA H V++Q + +M+ T ++ Sbjct: 121 ETKKFYPKEYQAAKEALLFVKQKTGVELSEDEAGFIAFHFVNSQQGNEDMQVTMTATTMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R++L +I F + + EESL+YQR++THL+F + R L+ ++ DE L V++ YP+A Sbjct: 181 RDILSIISKFFGIVFDEESLNYQRIITHLQFFAQRYLKGEGSDEQDEFLYALVQEKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + C ERI ++ ++++ AE ++L I+I+RV E Sbjct: 241 FHCVERINEYLRQTQKQEMGIAEQIYLTIHIQRVVSE 277 >UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKX7_DICZE Length = 289 Score = 289 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 171/281 (60%), Gaps = 5/281 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF R G+ + + +EK + L ++ R Sbjct: 1 MKITQVLNNNVVSVIDNQGQELILTGCGLGFHSRNGQDVEITRVEKIFRLQDDAISTRFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +PLE++ I+ + + +L KL + IY++L DH FA++ + ++ NPL W Sbjct: 61 HLAQEVPLEILQLTADIVEMVKTQLPQKLSEGIYVTLADHLAFALQCQRNGTVIQNPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y +EF + E+AL +I + LGV LP DE IA+H+V+A++ N+ ++ +TQL+ Sbjct: 121 EVRHFYKQEFAVAEQALALIREALGVALPNDEACSIALHIVNAELGDNIGNMKQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF S R++E ++++ D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSGNYHRFITHLKFFSQRVMEGTTLDNDDGELFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKEH 278 C E I FI YQ ++ +E ++L I+ I R+ + H Sbjct: 241 GCVEAINTFIKKNYQHTMTNSEKLYLTIHIDNMIHRLTQHH 281 >UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B6FYA9_9CLOT Length = 293 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 103/275 (37%), Positives = 176/275 (64%), Gaps = 1/275 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M++TK++NNN V +++ +E +VMG+GIGF+ + G+ I+ S +EK + ++ + Sbjct: 12 MFMKVTKVINNNFVCSCNEKNKEIIVMGKGIGFKAKEGDEIDKSKVEKVFTMNGKSAIDK 71 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ +P+E + II+ A+ LGK L +IYI+LTDH F++ RF+ + NPL Sbjct: 72 FKRLIEELPIEHFKVSNDIINYAKRTLGKRLNQNIYITLTDHINFSVYRFKNGMKFSNPL 131 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 LW+++ Y E+ +GE A+ +I ++LGV++ +DE IA+H+V+A+ + M D +T L Sbjct: 132 LWEVKHFYNPEYIIGEYAVNLIKEKLGVEMGEDEAANIALHIVNAEYNTEMNDALKITTL 191 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L+++ F + EESL Y RL+THLKFLS RI + DSD+ + + YP+ Sbjct: 192 IGDILKIVTDTFDIQLDEESLHYSRLITHLKFLSQRIFMGEMLKDSDDVFAEMIATKYPE 251 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA +I +I QY ++IS E+++LA++I RV Sbjct: 252 EFKCALKIRDYIEEQYNQRISNEELVYLAVHIRRV 286 >UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enterococcus RepID=C2HCM5_ENTFC Length = 306 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 175/281 (62%), Gaps = 4/281 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM I K+LNNNVV+ D++ +E +VMG+G+ F+K+ G+ I S I+K++ L++ L+ + Sbjct: 23 NMLIEKVLNNNVVITRDERNQEMIVMGKGLAFKKKVGDPIFDSCIDKKFQLTNDGLSQQF 82 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL IPLE + II +E L +L DS+YI+LTDH AI+R + + +PN LL Sbjct: 83 QELAQAIPLEYLEISCEIIEYTKEALQVQLNDSVYIALTDHLYTAIERHKMGIFVPNVLL 142 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 +DI++L+ KE+ +G++ + I + ++L +DE GFIA+HLV+AQ + ++ T Sbjct: 143 YDIKQLFHKEYAIGKKTVKKISDKYHIKLSEDEAGFIALHLVNAQGIQSQQDNTYLFTIT 202 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS--INDSDESLQQAVKQNY 237 ++++L ++++ + + + E+S+ + R VTHL+F R+L+ + + E L Q +++ Y Sbjct: 203 IQDILNIVRYYYKITFDEDSVHFFRFVTHLRFFLTRVLDGEKSEVGEVSEELFQVIQKKY 262 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C E+IA F+ + ++S E M+L I+ R+ E+ Sbjct: 263 KDTFGCVEKIADFLAETFNYQMSTDEKMYLTIHTARLVHEN 303 >UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B640_RUMGN Length = 278 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 105/273 (38%), Positives = 174/273 (63%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI+NNN+V +D + RE VVMGRG+GF + G +I + IEK + + S L + Sbjct: 1 MLIEKIINNNIVSAVDSKGREVVVMGRGLGFGMKPGRQIQENKIEKVFRIKSQTLAEQFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ +PLE + II+ A+E L KL SIY++LTDH FAI R+QQ + N LLW Sbjct: 61 DLLADMPLEHVKVSSDIITYAKENLKLKLNQSIYVTLTDHINFAITRYQQGIKPQNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +E++LG A+ I+++L ++LP+DE GFIA+H ++A+ ++ D L++ Sbjct: 121 EIKRFYSREYELGMYAVKTIEEKLRIRLPEDEAGFIALHFLNAEYGTDIRDAVKFPNLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L++++ + + E SL Y+R VTH+KFL R+ + D + L + +++ Y + + Sbjct: 181 KILEIVEEKLQIELDETSLHYERFVTHIKFLLQRVYRKELLPDEESELAELMQKKYQKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 C++ +A +I + + +S EIM+LAI+I RV Sbjct: 241 DCSKMVAAYIEEETKCSLSGEEIMYLAIHIRRV 273 >UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Firmicutes RepID=A6LXA2_CLOB8 Length = 279 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 120/277 (43%), Positives = 187/277 (67%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN+V D+ +E +VMG G+GF+K+ GE I+ +EK Y+L + +L Sbjct: 1 MKIEKVINNNLVQSFDNNNKEVLVMGCGLGFKKKPGEIIDKDKVEKIYSLEDKNYSNKLI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPLEV+ T + I+S A+ LGK L D+IYI LTDH FA++R + + N LLW Sbjct: 61 ELLSDIPLEVIQTTNEIVSYARYSLGKKLNDNIYILLTDHISFAMERVNKGLQFKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I+R Y EF +G+EAL II+KRL V LP+DE IA+H+V+AQ++ N++D +T ++ Sbjct: 121 EIKRFYNHEFLIGKEALQIIEKRLHVDLPEDEAANIALHIVNAQLNSSNIDDTMSMTNMI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +L ++KF + L E SL Y+R +THLKF S RI I D D SL + +++ Y +A Sbjct: 181 QNILNIVKFHYKLELDEYSLHYERFITHLKFFSQRIFRGNEIEDEDTSLSKIMREKYKEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++CAE+I ++ ++ +++ E+M+LA++I RV K+ Sbjct: 241 YKCAEKIKKYVKSEFNSELTDEEMMYLAVHINRVTKQ 277 >UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0E0_EXISA Length = 283 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 114/281 (40%), Positives = 176/281 (62%), Gaps = 7/281 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+K+ NNNVV ID +E+VVMGRGI FQKR G+ I+ + IEK + L S E R Sbjct: 1 MHISKVFNNNVV-AIDANGQEQVVMGRGIAFQKRPGDPIDQTRIEKIFTLESKESYERFV 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + M T +I+ LA+ RL + DS+Y++L DH FA+ R+Q + + NPL+W Sbjct: 60 HFLNEMPTDEMETVKQIVRLAEGRLTQPIHDSLYVTLADHLHFALSRYQDGIQIRNPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG----NMEDVAGVT 177 +++R Y EF +G+EA+ +I++R V+L +DE IA+HLV+A MSG N+ V +T Sbjct: 120 EVKRFYAPEFAIGKEAVKLINERHEVKLDEDEAVAIALHLVNATMSGVKGENLHLVTEMT 179 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQN 236 + + +L +I + F + EES +Y R +THLK+ R+ + + DE+L VKQ Sbjct: 180 RATQAILTIITYHFQIELDEESYAYARFLTHLKYFVQRLASGEKVKSTGDETLFLMVKQR 239 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+A++C E+IA I +Y +S E +++ I+IE + KE Sbjct: 240 YPEAFECVEKIAGLIATKYHYDVSMDERLYMMIHIENLMKE 280 >UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY82_9CLOT Length = 280 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 108/275 (39%), Positives = 174/275 (63%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K LNNNV VV D E +VMG+GI + K+AG+ ++ +EK++ S+ + + + Sbjct: 1 MKIKKKLNNNVAVVTDKTGNEIIVMGKGITYDKKAGDCVDVEQVEKQFVPSNKDFSMKFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L IP + + + II A++ L ++ D+IYISLTDH A+KR+ + +PNPLL Sbjct: 61 EILLDIPSKYLEVSNCIIERAKKYLDAEIDDNIYISLTDHIHMAVKRYLDGMQVPNPLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R Y KE+++G +AL II +L V+LP+DE GFIA H V+AQ + + + +L++ Sbjct: 121 DIKRFYNKEYEIGCQALEIIKDQLKVELPEDEAGFIAFHFVNAQQNLESSKMVDIMKLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI-LEHASINDSDESLQQAVKQNYPQA 240 E+ ++K+Q L++ EES+ Y R +THLKF + R+ LE+ D D L VK+ Y +A Sbjct: 181 EITNIVKYQMGLDFDEESVYYYRFITHLKFFAQRLFLENKQYTDEDNPLYHIVKEQYKKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + C + + F+ +Y KIS E ++L ++IE + Sbjct: 241 FNCTQSVVKFVDNKYNYKISKEEQLYLTVHIENII 275 >UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMZ3_ACTSZ Length = 280 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 172/277 (62%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ITKI NNN + ++ Q E VV+G+G+ F K+ G+ + S +EK ++L+ GRL Sbjct: 1 MLKITKIFNNNAIQAENELQTELVVLGKGVAFGKKVGDSADESLVEKTFSLNKSLFAGRL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +E+LS IP E + ++ A ++LG L +SI++SL DH A++R +QN +PN LL Sbjct: 61 TEILSEIPQEYFQLTNCVVDFANQQLGTTLSNSIFVSLPDHIFHAVERAKQNQTVPNGLL 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 ++IQRLY +EF +G L +I+KR GVQ+ +DE GFIA+H+ +A+ G+ M D TQ+ Sbjct: 121 FEIQRLYKQEFAIGLYTLQLIEKRFGVQMTEDEAGFIALHIFNARTDGSTMADTYKATQM 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++++L ++ + F+L E S Y R +THL+ + R ++ D+ L + K YP+ Sbjct: 181 IKDILNMVGYHFNLVLDENSYDYARFLTHLQHFAQRFFVNSEPASGDDFLYRQTKIAYPK 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+QC E+I ++ Y + ++ E ++L I+I R+ Sbjct: 241 AYQCVEKINKYLTANYHKPLNEDEQLYLMIHIRRIIS 277 >UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Streptococcus RepID=C2LUU8_STRSL Length = 280 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 167/276 (60%), Gaps = 3/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 MQI KILNNNVV +D E +VMG+G+GFQK+ G+ ++ IEK + L + E Sbjct: 1 MMQIEKILNNNVVQALD-NNVEYIVMGKGLGFQKKVGDLVDKEKIEKTFVLENTEAVEEW 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S + ++P M I++ A+ L K S +I+L DH +AI+R + V L NPL Sbjct: 60 SRVYVNLPDGEMQVFLNILTFAEAVLQTKFDPSFFIALADHLHYAIERSSEGVSLQNPLA 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQL 179 W++++ YP+E+++G++AL +I K L VQL DE +A+H V+AQ + E +TQ+ Sbjct: 120 WEVRKFYPREYEIGKQALRLIAKDLEVQLADDEAASVALHFVNAQKDAGLHEKDRQMTQI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + +++ F + +E+S SY R +THL++L+ RI+ S +D L + VK NYP+ Sbjct: 180 VVGISDIVRLHFGYDLEEDSFSYNRFMTHLQYLAQRIVSGVSGGKNDAFLYEQVKLNYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ C ++IA +I Y +S E ++L I+I+R++ Sbjct: 240 SFVCTKKIATYIETSYAFDLSLDEQVYLTIHIQRLK 275 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 G Q+ +L + + + L HL + R E S+ + L V+ Sbjct: 69 GEMQVFLNILTFAEAVLQTKFDPS--FFIALADHLHYAIERSSEGVSLQN---PLAWEVR 123 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + YP+ ++ ++ I + +++ E +A++ +K+ Sbjct: 124 KFYPREYEIGKQALRLIAKDLEVQLADDEAASVALHFVNAQKD 166 >UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Actinobacteridae RepID=B3DQG5_BIFLD Length = 279 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 152/276 (55%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ E ++ GRG+GFQ + G+ ++ S + + + S L+ Sbjct: 1 MEILRVFNNNVVLAKGGDGGEVILTGRGLGFQAKPGQTVDESKVVRTFVPSDGRDPDHLA 60 Query: 63 ELLSHIPLEVMATCDRIISLA---QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 ++L+ IP E++ + A + G ++ ++L+DH A++R ++ + + PL Sbjct: 61 QMLADIPPEIIRVVVESMQEAGLGERETG--STTLVMALSDHVANAVERVRRGIDITYPL 118 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQ 178 L ++ LYP+E+ G L ++ RL V LP E +AMHLV+A +G++ +T Sbjct: 119 LGEVSNLYPQEYAQGRAMLASLNARLDVTLPDGEATALAMHLVNAGFATGDLSYTYTMTG 178 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++++L +I + + S++ R +THL++L RI +H + D + + ++++YP Sbjct: 179 VIQQLLDIIDHSYGITLDRSSVNVGRFITHLRYLFVRIHQHQQLTDEPAPVMKVIRESYP 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A +CA IA + L+ IS E +LA+++ RV Sbjct: 239 AALRCARTIASLLELRLDTDISDDETAYLAMHVARV 274 >UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFG1_9FIRM Length = 286 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 98/277 (35%), Positives = 182/277 (65%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K+LNNNV+ + + ++ ++ G G+GFQKR G+ + + IE+ + L RLS Sbjct: 6 FHVKKVLNNNVIFSKNQEGQDIILTGLGLGFQKRKGDPVEAEKIERIFILKEEATGNRLS 65 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL IP++ D+I A+++L K L +IY++L DH +A++RF+Q +L N L+W Sbjct: 66 ELLKQIPIDYFYLADQIKQHAEQKLSKELNQNIYVTLCDHMYYAVERFKQGLLFQNQLMW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+R YPKE+Q+ EA+ +++ L V+LP+DE F+A+H+++A+++G+ ++ V +T+L+ Sbjct: 126 EIKRFYPKEYQIALEAIKLMNSTLNVKLPEDEASFVALHIINAELNGHEIQSVIDMTRLI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + + +++++F +++ E SL+Y R + HLKF S R++ + + L V++N P+A Sbjct: 186 KGICSIVQYEFKIDFDENSLNYTRFILHLKFFSQRLMMNEPPAEEASFLYPQVQENMPEA 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +QC+ +IA++I Y I+ +E ++L I+IER+ E Sbjct: 246 FQCSRKIALYIQKSYNYTITKSEQVYLTIHIERLLSE 282 >UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=C6CA98_DICDC Length = 281 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 96/275 (34%), Positives = 172/275 (62%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF GE ++ S IEK + L ++ R Sbjct: 1 MRITQVLNNNVVSVIDNQGQELILTGCGLGFHSHTGEEVDDSRIEKIFRLQDDAISARFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ +PL V+ D I+ LA+ L +L + IY++L DH FA+ + ++ NPL W Sbjct: 61 DLVHEVPLAVLQLTDDIVELARRTLQQRLSEGIYVTLADHLTFALNCQRDGTVIRNPLHW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +AL +I ++L V LP+DE IA+H+V+A+++ ++ ++ +TQL+ Sbjct: 121 EVRRFYRQEYAVAAQALALIAEKLHVSLPEDEACSIALHIVNAELNDDIGNMRQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF + R++E ++ + D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSSNYHRFITHLKFFAQRVVEGMTLENDDGDLFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E I++FI Y +S +E ++L I+I+ + Sbjct: 241 GCVEAISLFINNHYHHVMSNSEKLYLTIHIDNIIH 275 >UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCB1_9FIRM Length = 305 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNN+V D+ +E VVMGRGIGF+ R G+ I IEK + + + RL Sbjct: 28 MKILKAINNNIVSARDENGKEIVVMGRGIGFKCREGDSIPPEAIEKIFHMDTQNETDRLK 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L S +PLE + +RII+ A++ LGK L SIYI+LTDH F++ RF+QN++ N LL Sbjct: 88 QLFSSMPLEHIEVTNRIIAYARKILGKRLNHSIYITLTDHISFSVLRFRQNMMFHNALLA 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R YP+E+ +G+ AL +I K LGV+ P DE IAMH+V+A+ ++ + +T L+ Sbjct: 148 EMRRFYPQEYSIGQYALDLIAKELGVRFPDDEAASIAMHIVNAEYDISLGEAVDITHLID 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +ML++++ E S+ + R VTHLKFL+ R L D +L A+ YP Sbjct: 208 QMLRIVRDWHRRPLDETSVDFDRFVTHLKFLAQRALRQDRPPAGDRALYDAIAALYPGET 267 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 CA R+ ++G + I E LAI+I RV Sbjct: 268 ACAHRVGAYLGDTHSFLIGDLEAACLAIHIRRV 300 >UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAD7_9FIRM Length = 279 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D+ RE V+MG+GIGFQK+ G+ + IEK++ L S + G+ S Sbjct: 1 MIINKVINNNVLSTHDENNREIVLMGKGIGFQKKVGDEVAEDKIEKKFVLDSEDEVGKFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP + IIS AQ+ + K L SIYISLTDH F ++R + L NPL Sbjct: 61 ELIEMIPHNYLNLSVDIISYAQQVMPKRLSPSIYISLTDHINFLLERSTKGELFENPLFN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ YP E+ +G++AL +I+ G++LP+DE IA+H V A+ + M D T ++R Sbjct: 121 EIKSFYPSEYLVGKKALELIESEAGIKLPQDEAASIALHFVIAEYNMGMSDTVNATTMIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + +++ + + E L Y R +THLKF + R+ +++ D+ + YP+ + Sbjct: 181 ECISIVEKELGIKLDELGLHYSRFITHLKFFAQRMFAGELLDNQDQEFLDMIINKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +E+I+ F+ +Y I E ++LA+ I+R++ Sbjct: 241 DISEKISQFVQSKYGYDIPKEEKVYLAVYIKRIQ 274 >UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=C2Q5B4_BACCE Length = 283 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 177/277 (63%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH-ELNGRL 61 M I K+ NNNV +V + E +VMG+GI FQK+ GE I+ S ++K + L +++ +L Sbjct: 1 MLIKKVFNNNVALV-NRTGTEMIVMGKGIAFQKKVGEYIDESIVDKVFVLEKESQVSNKL 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L++ IP E +I+ ++++ + D+IY++LTDH FAI RFQQ ++ NPL Sbjct: 60 LQLINEIPTEHFELTTQIVEYIKKQISNSISDNIYLTLTDHINFAINRFQQGQIIRNPLF 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W+I++ YP+E+ + ALTII + G +LP++E G IA+H+++AQ ME+ VT++ Sbjct: 120 WEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINAQQDNIVMEETIMVTKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +L+++ + F + E+SL+Y R VTHL++ ++R+ + I + D L Q VK++YP+ Sbjct: 180 VGGILKIVNYHFGIKLDEKSLNYNRFVTHLRYFAYRLSRNEQIVEEDSLLYQQVKESYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ CA++I + Y +K++ EI + I+I RV + Sbjct: 240 AYGCAKKIMALLKSNYNQKLTKNEITYFVIHINRVTQ 276 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 5/108 (4%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 E +L ++++ IK Q S + + Y L H+ F R + I + L Sbjct: 65 EIPTEHFELTTQIVEYIKKQISNSISDN--IYLTLTDHINFAINRFQQGQIIRN---PLF 119 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 +K+ YP+ + + I ++ E +A+++ ++++ Sbjct: 120 WEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINAQQDN 167 >UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostridiales RepID=C7GD80_9FIRM Length = 277 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 108/273 (39%), Positives = 178/273 (65%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D Q+E V+MG+GIGF+ GE I+ S IEK + + + L+ + Sbjct: 1 MVIQKVINNNVISAYDVNQQEIVIMGKGIGFKAHTGELIDESKIEKVFRIENENLSRQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL +IPLE M IIS A + L +L +IYI+LTDH FAI+R Q + L N LLW Sbjct: 61 ELLENIPLEHMQLTSDIISYAIKNLNVQLNQNIYITLTDHINFAIQRQSQGIQLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++ Y +E+ +G+ A+ +++++LG + +DE GFIA+H V+A+ + + D +T +++ Sbjct: 121 ETKKFYHQEYLMGKYAVDLLNEKLGTEFTEDEAGFIALHFVNAEYNTTINDTFEMTNMIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L+L++ + + + EESL Y+R +THLKFL R+ H + D + + ++ YP+ + Sbjct: 181 KILELVRLEMGIEFDEESLHYERFITHLKFLVQRLYRHELLKDEEIEFARMMENKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C++ IA +I +Y I+ EIMFLAI+I+RV Sbjct: 241 ECSKHIAEYIEKEYGSGIASEEIMFLAIHIKRV 273 >UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0MGF2_9FIRM Length = 291 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 183/277 (66%), Gaps = 1/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK++NNNVV D+ E ++MG G+GF+ + G+ ++ S I+K + L ++ R Sbjct: 8 MKITKVINNNVVSSTDEAGNEVILMGTGLGFKGKEGKVVDESKIQKIFHLEDAGVSQRFK 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL++ +P+E++ TC II A+ L KL ++IYI+LTDH FA++R +Q+++ PNPL Sbjct: 68 ELITDLPMELLNTCSNIIMYAKGILDTKLNENIYITLTDHINFALQRMEQDMMYPNPLSR 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y E+++GE AL I++K LGV+LPKDE IA+H+VSA+ + D +T ++ Sbjct: 128 EVKTFYDLEYKIGEYALGIVEKDLGVRLPKDEAVSIALHVVSAEYDTKVRDTVQITTFIK 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +K F + E SL+Y+R +THLKFLS +++ +++ + L++ + YP + Sbjct: 188 NVIDKVKDYFQMELTETSLNYERFITHLKFLSRKVMSGGGMDEIEPELRKMISAMYPDEY 247 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 QC+ IA +I +Y+R++S EI++L ++IER++ + Sbjct: 248 QCSREIAEYIKKEYRREMSEGEIVYLTMHIERIKSSN 284 >UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes RepID=C9XQT4_CLODC Length = 287 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 111/277 (40%), Positives = 185/277 (66%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNNVV+ +DD E +VMG+GIG+QK G I+ + + K + +S+ E++ +L Sbjct: 8 MIINKILNNNVVITLDDNDEEVIVMGKGIGYQKSKGNLIDKTKVNKVFRISNKEISNKLQ 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL++IP+E M II AQ +L K L +SIYISL+DH AI+R ++ + + N +LW Sbjct: 68 ELLNNIPIEHMKLSSEIIEYAQIKLNKKLNESIYISLSDHTYSAIQRMKEGINVKNAILW 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +EF++G +AL II+ + G++LP+DE GFIA H+V+AQ+S + +T+L++ Sbjct: 128 EIKRFYKEEFEIGMKALDIIENKTGIKLPEDEAGFIAFHIVNAQLSEGHTLASDITKLIQ 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWR-ILEHASINDSDESLQQAVKQNYPQA 240 E+L ++++ F + + EES+ Y R + HLKF + R +L+ A ++D+ L +K Y + Sbjct: 188 EVLSIVRYHFRIEFHEESVFYYRFIMHLKFFAQRLLLDSAHEGETDKELLSIIKSKYNKE 247 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +I FI QY ++ E+++L I++ +V K+ Sbjct: 248 FECVVKIKNFIKKQYNYILTDDELIYLTIHLAKVVKD 284 >UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Enterobacteriaceae RepID=A1JND6_YERE8 Length = 277 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 110/274 (40%), Positives = 177/274 (64%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LNNNVVV D +E VV+G+G+GF K+ + ++ +GI+K + L + + Sbjct: 1 MRIQRVLNNNVVVAHDFSGKECVVIGKGVGFNKKPNDLVDEAGIQKIFRLDAENSFDKTH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + +P E+ I+ A +L K+ S+Y SL DH FAI+R +Q V + N LLW Sbjct: 61 DAFQDLPEELFDIVLDIVKQATTKLDRKIHKSVYASLLDHISFAIERAKQGVHVRNMLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+RLY EF +G AL I ++L V L +DE GFIA+HL+++Q G M D+ V+++++ Sbjct: 121 DIKRLYRNEFIIGISALENIKQKLNVDLAEDEAGFIALHLLNSQKDGTMPDIENVSKVIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ F++ Y+EES+++QR VTHLKF S R+L + + +D SL V + Y ++ Sbjct: 181 DLLNIVKYHFNIEYEEESINFQRFVTHLKFFSHRLLSNTYVMTNDNSLHDVVAEKYSTSY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +C ++I FI Y R+++ E+MFLAI+IE VR Sbjct: 241 ECTKKINKFIKHDYGRELTSDEMMFLAIHIEHVR 274 >UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Bacteria RepID=D0KIH3_PECWW Length = 313 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 90/276 (32%), Positives = 169/276 (61%), Gaps = 2/276 (0%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 + KILNN++V+ D E +VMG+GIGF + G+ ++ + IEK + L + Sbjct: 37 KAIKILNNSLVLSSDADNNEIIVMGKGIGFNSKTGDILDPAKIEKTFILKDGTSPREFAR 96 Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L+ H+ E + ++II A +L G+L + ++ +L DH FAI+R+++ + + N LL++ Sbjct: 97 LIEHVREEYVHIVNKIIDDANRQLHGRLSEQVFFTLIDHISFAIERYRKGISIQNRLLYE 156 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMR 181 ++R YP+EF + AL I++++ ++LP++E G IA HLV+AQ NME+ ++++ Sbjct: 157 VKRFYPQEFAIASRALNDINQQMTLELPEEEAGNIAFHLVNAQTDIQNMENTLQSVKMLK 216 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +I++ F + +ES++Y R +TH++F R+LE++ I+ +D+ + V + YP A+ Sbjct: 217 DIFNIIQYNFHIVIDKESINYSRFLTHMQFFIQRLLENSLIHSNDDFIFDQVTKEYPDAY 276 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +C+ I +I IS E+++L I+I R+ E Sbjct: 277 KCSRLIKDYIHNLLNIDISNDEMLYLIIHIVRITPE 312 >UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8L7_9FIRM Length = 283 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 95/278 (34%), Positives = 172/278 (61%), Gaps = 3/278 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +++ K+ NNN+++ D+ E ++MGRGIG+ + G+ + S I+K + +++H+ Sbjct: 1 MKLRVKKVFNNNILLAEDENLLEVILMGRGIGYAMKPGDPADESKIDKVFKITAHQQQED 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L+ IP+ + +I+ +AQ+ L + D IYI LTDH F IKR +QN L N L Sbjct: 61 FVKLMKEIPINHLELTKKIVEMAQKELNVQFDDVIYIGLTDHIHFVIKRAKQNEQLKNAL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 LW+I++ YP+EF +AL +I+ G+QL +DE FIAMH V+ Q SG + + TQ Sbjct: 121 LWEIKKFYPREFAASMKALELIEYSEGLQLTEDEASFIAMHFVNGQQSGEAIRETVEATQ 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++++L +IKF + ++ E S++Y R +TH++F RI ++++ D+ L + VK+ YP Sbjct: 181 IIQDILNIIKFHYKIDLNENSINYSRFITHIRFFLQRIRGSLNVSE-DDYLFEKVKEKYP 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ CA RI ++ + +++ E+++ ++I R+ + Sbjct: 240 DAYACASRIKTYLDAKLGVELTHEEMLYFMLHIRRLTE 277 >UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=D2C0F0_DICD5 Length = 279 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 160/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K+LNN++V+ DD RE +VMG+GIGF R G+ I IEK + S E Sbjct: 1 MIVQKVLNNSLVLSSDDDNREVIVMGKGIGFNSRPGDEIAQEKIEKLFVTQSFEKRSGYI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E LS IP EV+ IIS A +L K+++ I+ +L DH FAI+R ++ +++ N LL Sbjct: 61 EGLSAIPDEVIEMAAMIISRANLQLSSKVREQIFFTLADHLTFAIERSRKGIVIQNRLLP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +++R YP++F++ EA+ II ++ G++LP++E G IA HLV+ Q G+ + +++ Sbjct: 121 EVRRFYPQQFRVASEAVAIIRQQYGIELPEEESGNIAFHLVNGQSEGDDVAQAMQSVKML 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++ L+++ F ES++Y R +TH++F R+ E D L V + YP A Sbjct: 181 KDIFNLVQYHFKKEIDTESINYSRFMTHMQFFLQRLQEGEISTARDSFLLAQVIKEYPDA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++ A I ++ ++ + E+++L +++ R+ Sbjct: 241 YRGALLIRDYVKVRLDITLGGNELLWLTVHLVRI 274 >UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIH6_9FIRM Length = 276 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 161/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNN ++V + + +E++VMGRG+ F+ + G R+ +E+ + + S Sbjct: 1 MKVLKILNNNFILVENAKGQEEIVMGRGLRFKTQVGGRLEEKDVERRFVSGQGGILKDYS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ IP E + + A L L + +L DH +A++R Q+ ++L N LLW Sbjct: 61 RMIEEIPQETLEAVQEAVDAAGSSLSCPLDSQAFFTLLDHLIYAMERCQKGIVLQNRLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+E++ G++A+ +++RLG++LP++E G IA HLV+AQ G ME +++ Sbjct: 121 EVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNAQTEGMTMERTMSSVKMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +++F ESL + R VTHL+F R+LE + ++D L + + + YP Sbjct: 181 KDILTVVQFHMKKELDTESLYFSRFVTHLQFFVQRLLEGRMLEETDSFLYEQISRQYPNE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A +I+ ++ + I+ EI++L I+I RV Sbjct: 241 LEAAMKISGYVEKSTKTLITREEILYLTIHITRV 274 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 50/122 (40%), Gaps = 8/122 (6%) Query: 161 LVSAQMSGNMEDVAGVTQLMREMLQLIKFQFS-----LNYQEESLSYQRLVTHLKFLSWR 215 VS Q + + ++ +E L+ ++ L+ +S ++ L+ HL + R Sbjct: 48 FVSGQGGILKDYSRMIEEIPQETLEAVQEAVDAAGSSLSCPLDSQAFFTLLDHLIYAMER 107 Query: 216 ILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + + + L VK+ YP+ ++ + ++ + K+ E +A ++ + Sbjct: 108 CQKGIVLQNR---LLWEVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNAQ 164 Query: 276 KE 277 E Sbjct: 165 TE 166 >UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AZS3_ENTCA Length = 279 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 163/276 (59%), Gaps = 2/276 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M+I K+ NNN +V++D +E+VVMG GIGF R G+ ++ IEK + ++ + Sbjct: 2 LTMEIVKVFNNNASLVLNDNHQEEVVMGSGIGFGLRPGDTVDQKKIEKRFIINDQKSIAD 61 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L +LL I + I+ L +E + ++ ++L DH FA+ R ++ + + PL Sbjct: 62 LEQLLKRIEYRDLQLASDILKLFEEAFQCESNPALLVALADHIGFALTRAREGMKIQTPL 121 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 W+++++YPKE+++G +A+ ++ KR + +PKDE FI +H V+ N ME+ +++ Sbjct: 122 EWELKQVYPKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVNFLGDNNGMEETMLISK 181 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +M+++L +I + + ++++S+ + R +TH+++ R + + SL ++ YP Sbjct: 182 VMKDILTIINYHYGKEFRQDSIYFSRFITHIRYFVKRQMSNELPAQPASSLLDVIQLKYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA +I F+ +YQ +I+ E+++L +++ R+ Sbjct: 242 LDYECAMKIKQFLENRYQWEITEDEVLYLTLHLNRL 277 Score = 51.7 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 QL ++L+L + F + L H+ F R E I L+ +KQ Y Sbjct: 75 QLASDILKLFEEAFQ--CESNPALLVALADHIGFALTRAREGMKIQT---PLEWELKQVY 129 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 P+ ++ + + + I E F+ ++ ++ Sbjct: 130 PKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVNFLGDN 170 >UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 Tax=Lactobacillus rhamnosus RepID=C7TGE9_LACRL Length = 283 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 102/274 (37%), Positives = 174/274 (63%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNV+V D+Q E+V MG+GIGF++ AGE ++ S ++K + L + +L S Sbjct: 1 MEIYKILNNNVIVTKDEQGFEQVAMGKGIGFKRSAGETLDPSLVDKIFYLKNSDLQEHFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ +P +++ ++ I A +L KL S+++SL DH A+KR+++ L+ N L++ Sbjct: 61 SLINEVPYAILSVSEKFIDEAASQLKQKLNASLHVSLVDHIYHALKRYEKGQLISNSLIF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LYP+EF+L E L +I ++ GVQLP DE GFIAMHL++A+M+ M + + + Sbjct: 121 EIENLYPEEFELSEHFLQMIAEQEGVQLPVDEAGFIAMHLINAEMNEEMGTTVSIMKEVY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L +IK+ + Y E SLSY RL+THLKF R+++ + + D L V + YP A+ Sbjct: 181 AILNIIKYSMDVEYDERSLSYYRLLTHLKFFVQRVMKGSMLASDDAELYMLVSRKYPDAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A +I ++ + + E+++L I++ R++ Sbjct: 241 RVANKITKYVANAFHVVLPAEEVLYLMIHLNRLK 274 >UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALQ6_SEBTE Length = 281 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 105/279 (37%), Positives = 176/279 (63%), Gaps = 4/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYAL--SSHELNGR 60 M+I K+LNNNVV V + E ++MG G+ F K+ G+ ++ S IEK + L + Sbjct: 1 MKILKVLNNNVVTVKTEAGEEVIIMGCGLAFGKKRGDNVDESKIEKIFTQTREDKNLYKK 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L + + IP E + ++I+ LA+E+L KL D+IYI+L+DH FA+KRF L N L Sbjct: 61 LEDTIERIPAEYIDITEKIVKLAEEKLQMKLSDTIYITLSDHIYFAVKRFGDGQSLKNIL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 W+I+ Y E+ +G+EAL II + + LP DE GFIA+H+V+A+++ NM +V +T++ Sbjct: 121 FWEIKSSYKDEYLIGQEALKIIKDTVDLSLPDDEAGFIALHIVNAELNENMMNVMIITKI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYP 238 ++E+ ++K+ F++ EE+ +Y R + HLKFL+ R+L + + N S D+ L ++ +Y Sbjct: 181 IKEITNILKYHFNVELDEENQTYYRFIVHLKFLAQRLLNNTTCNHSNDDELFNVIRASYK 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ C +I I Y S E+++L+I+IE++RKE Sbjct: 241 ESFACTVKIFEHIKKNYNYSFSRDEMVYLSIHIEKLRKE 279 >UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 Tax=Listeria RepID=Q71VY8_LISMF Length = 281 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 100/275 (36%), Positives = 181/275 (65%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I +ILNNN+V ID+ +E +++G+G+GF + G+ IN S IEK + L + + Sbjct: 4 LRIERILNNNIVSAIDEDAQELLILGKGLGFNSKVGDPINESKIEKVFELKD-DTMDKFK 62 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ IP++ + D I+ L + + K + D IYISL+DH FA +R Q+NV++ NPL W Sbjct: 63 MIVNEIPIQFLEVTDDIVKLFKMKTTKDISDVIYISLSDHLYFATQRLQENVVIENPLSW 122 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +EA +++ +L ++LP E+ IA+H V+A++ +M DV + QL++ Sbjct: 123 EVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFVNAEVDSDMNDVTHIMQLIQ 182 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E++ +IK+ F++ + EES +Y R +THLKF R++ +I++ DE L Q VK++ + Sbjct: 183 EIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGETIDEMDEFLYQTVKKSRGAIF 242 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C ++I +F+ YQ +S +E +LA++IER+ K Sbjct: 243 ECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLK 277 >UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 Length = 281 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 160/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV+VI++ EK++MG+GIGFQK G+ ++ + +EK + L+ G+L Sbjct: 1 MIIKKVFNNNVVLVIENPTEEKILMGKGIGFQKFPGDPVDLANVEKTFVLNDEATEGKLD 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +PLEV+ C ++ ++ LG + D++ I L DH FAI R ++ + + PL W Sbjct: 61 AFFEEVPLEVIQMCAHLLKSGKKVLGPHITDNLLIPLADHINFAITRVKEGIQIEYPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+ +YP+E E + + + ++LPK+EV IAMH V+A++ + +T L+ Sbjct: 121 EIRHMYPEEVAFAESVIKWMKDKENIELPKEEVVPIAMHFVNARIGTAEVNQAFEMTTLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L +I + + + E+SL+Y RL+THL++ R ++ S + L VK YP+A Sbjct: 181 AKILDIINYHYLIQVDEDSLNYARLMTHLRYFILRQMKKESDIVEEAILYDVVKSKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA ++ + ++ E+++L ++I RV Sbjct: 241 FECALKVKKLLEETMGWIVNHDEVLYLTLHIHRV 274 Score = 40.9 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 95 YISLTDHCQFAIKRFQQNV--LLPNPLLWDI-QRLYPKEFQLGEEALTIIDKRLGVQLPK 151 Y L H ++ I R + ++ +L+D+ + YPK F+ + ++++ +G + Sbjct: 202 YARLMTHLRYFILRQMKKESDIVEEAILYDVVKSKYPKAFECALKVKKLLEETMGWIVNH 261 Query: 152 DEVGFIAMHLVSAQMSGNME 171 DEV ++ +H+ + Sbjct: 262 DEVLYLTLHIHRVTTREKTK 281 >UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP7_9ACTN Length = 295 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 95/275 (34%), Positives = 156/275 (56%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++ NNNVV+V DD E++ +G+GI F ++ G+ ++S+ IEK + L RL Sbjct: 1 MYIKRVYNNNVVMV-DDAGTERIAVGKGIAFGRKRGDMVDSASIEKVFTLDDPTQLSRLE 59 Query: 63 ELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP E + + I+++ +E + DS+ I+LTDH A++R Q ++ NPLL+ Sbjct: 60 RLIKGIPSEYLLIAEDIVAMLRRESDSVIDDSVLIALTDHISMALEREQAGIICDNPLLF 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +EF+L +A II LG+++ + EVGFIA+H+V+A M + + +++ Sbjct: 120 EIKRFYGREFELALKAREIIRGHLGIEISEAEVGFIALHIVNATMKQRTDHLMLSIKMIN 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L + F L Y E S+ Y+R + HL+F S R+L+ + D L K YP A Sbjct: 180 GILNTVSETFGLTYDEGSVQYERFLRHLQFFSQRVLDKSIAQSEDTFLFHLGKDQYPDAL 239 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C ERI I +Y +S AE +L +I + Sbjct: 240 ECTERIGAHIEQEYGCVVSDAEKGYLVYHIANLVH 274 >UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXG9_9LACO Length = 281 Score = 269 bits (688), Expect = 9e-71, Method: Composition-based stats. Identities = 98/279 (35%), Positives = 173/279 (62%), Gaps = 5/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI ++LNNN V+ + E ++MG GI + K+ G+ ++ S +E+ + L + + + Sbjct: 1 MQIKRVLNNNAVISENHSGVEVLLMGSGIAWNKKRGQDVDISKVEQTFLLKNPDTLNKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++ P++ + +RII+ A+ +LG KL + IY++LTDH AI+R++ + L NPL W Sbjct: 61 EVVIDAPMDEVLIAERIINYAKIKLGRKLNEIIYVNLTDHLHGAIERYRSGIKLTNPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED--VAGVTQL 179 DI RLYP E+ +G +A+ ++ ++LG+ DE FIA+ + + +G E +TQ+ Sbjct: 121 DIARLYPDEYDVGMKAVELVKRKLGIDFLDDEAAFIALSFLDVESTGGNEQNNAYQMTQI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 + E+ +++K F + E+SL+Y R +THLKF + RIL H +D+D L +++ + Y Sbjct: 181 VTEVEKIVKDFFHTEFDEQSLNYFRFITHLKFFAQRILTDTHYPDDDTDRELMESLSRRY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+A CA+++ FI +Y+ IS E+M+L ++I R+ K Sbjct: 241 PKALTCAQQVHDFIQRKYRFTISDQEVMYLTVHIARLVK 279 >UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAD4_NAKMY Length = 289 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 92/276 (33%), Positives = 156/276 (56%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ K+ NNNVV+ D++ E V+ GRG+GF+ AG ++ S +E+ + S R++ Sbjct: 1 MQVLKVFNNNVVLGRDERGVEHVLFGRGLGFKVTAGATVDESRVERRFGPSGTGGVDRIA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNV-LLPNPLL 120 L++ IP E + RI+ LA+ RLG + D I + L DH FA++R + + PL Sbjct: 61 ALVNEIPPEDIDLTGRIVELARGRLGPHITDHILLPLADHLSFALRRAAEGAGEIEYPLR 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W++Q LYP E Q+ AL ++ + GV+LP+ E +A+HLV+AQ ++ A +TQ Sbjct: 121 WEVQYLYPAEVQVARAALDLVAQERGVRLPEVEAVPLALHLVNAQFDTSDISTTAQMTQT 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + L +I+ ++ + E S+ R VTHL++L R + + ++ L A++ P+ Sbjct: 181 LHRTLDIIREEYGVEIDEGSVEVARFVTHLRYLFLREQQGRKLRETPAELHAALQSARPR 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A RI + QY IS EI++LA+++ R+ Sbjct: 241 EYTSAGRIGTLLADQYGWAISTDEILYLALHVSRLV 276 >UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes bacterium D7 RepID=C3RIA8_9MOLU Length = 275 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 101/263 (38%), Positives = 172/263 (65%), Gaps = 1/263 (0%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 V +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP++V+ Sbjct: 12 VSSLDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVDVL 71 Query: 74 ATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQ 132 D II A+ L K L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E++ Sbjct: 72 NVTDEIIDFARNGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYK 131 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFS 192 + EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 132 IAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHLK 191 Query: 193 LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 +++ E+SL Y R VTHLKF + R++ D+ L V + YP+A++C + I + Sbjct: 192 ISFDEDSLDYHRFVTHLKFFAKRLMFGEKEAKRDDILFDIVIERYPEAFECVKNIEKHVQ 251 Query: 253 LQYQRKISPAEIMFLAINIERVR 275 Y++ +S AE ++L ++I R++ Sbjct: 252 KIYKKDLSQAEKLYLTLHIARLK 274 >UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clostridium RepID=A6LYH3_CLOB8 Length = 276 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 102/279 (36%), Positives = 179/279 (64%), Gaps = 9/279 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNN ++ D ++E V+MGRG+GF+K G++++ + IEK + L + + + Sbjct: 1 MIIKKIFNNNAILAKDLSKQEIVIMGRGVGFKKSVGDQVDENLIEKTFILKQKDASEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP E ++ C II A+ L +L D IYI+LTDH +A+K F + + PN L+W Sbjct: 61 LLLEDIPTEHVSLCYDIIEYAKNMLSVELNDYIYITLTDHISYALKLFDEGLNRPNALIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN---MEDVAGVTQ 178 +I++ YPKEF++G +AL +I +LP+DE G IA+HL++AQ + + +ED+A T+ Sbjct: 121 EIKKFYPKEFEIGLKALDLIQSETNKKLPEDEAGNIALHLINAQTNNSGNKVEDIAHQTK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI-NDSDESLQQAVKQNY 237 +++++L +IK+ +++ E+SL+Y+R VTHL+F R+ ++ + + D+ L + VK Y Sbjct: 181 MIQDILNIIKYTYNIALNEKSLNYERFVTHLRFFFQRLSKNEKMEKEEDDFLLKQVKTKY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A++C +I ++ + +S E ++L I+I+RV + Sbjct: 241 KKAYECMLKIQKYLEKE----LSDEEQLYLTIHIQRVTQ 275 >UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XN38_CLODC Length = 293 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 178/276 (64%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I +I NNNVV+V+D+ ++E ++ G GIGFQK+ G+ I+ S IE+ + + ++ Sbjct: 14 MIIQQIYNNNVVLVLDENIKKELILTGCGIGFQKKKGQEIDKSKIERTFVIQDESFLDKI 73 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L S + + II+ A+E L KL + IY++LTDH FAIKR+ +N+ + N LL Sbjct: 74 SKLASQVDEKFFEISTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIKNDLL 133 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+R++ KE+++G+ A+ I+K V+ P DE GFIAMH+V++ G+ ++ +T+++ Sbjct: 134 HEIKRIHKKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSKESLLITKIV 193 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +I++ + + ++E+ ++Y RL+THLKF + R+++ IND++ + +K Y + Sbjct: 194 KDILNIIRYYYRVEFKEDDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVKYEKD 253 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + CA +I + Y +S E+++L ++I+RV Sbjct: 254 YDCAYKIKTHVEKNYDYYVSQDELLYLTLHIKRVIS 289 >UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC1_9FIRM Length = 288 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 170/282 (60%), Gaps = 7/282 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN++ VID++ E +V G+G+GF ++ + ++ + +EK Y + RL Sbjct: 1 MRIKKVINNNILCVIDEKGNEMIVAGKGLGFGRKVAQFVDPAQVEKVYRMEDKTGQRRLR 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP+E + + +I+ + + L +S+ I+L DH FAI+R Q + NPL Sbjct: 61 ELVEQIPIEHLDLTEAMIAEIKAAIHQPLNESLLITLADHISFAIQRKAQGIEFKNPLAG 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 I YP E+QLG+ L ++ +R GV+L DE FIA+H+V+A+++ +M ++ +T+L+ Sbjct: 121 SILCYYPTEYQLGQRCLAMVKERFGVELSPDEAAFIALHIVNAELNTDMSEMYDITRLIE 180 Query: 182 EMLQLIKFQFSLN--YQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVKQ 235 ++Q++++ + + ESL++ R V HL++ + R+ + + DS + + + + Sbjct: 181 GVIQVVEYYYRDRGAFDRESLTFHRFVVHLRYFAQRLFQGKLMTDSADESEAAFRALIAR 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 N + ++CA+ +A +I + + +S E+++L I+++RV + Sbjct: 241 NCKEHYKCAQCVADYIEKTWHQTLSQEELIYLTIHLKRVAGD 282 >UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB Length = 282 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 181/277 (65%), Gaps = 3/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I KILNN+ V IDD R EKV+MG+GI FQK+ G+ +N IEK +++ + N + Sbjct: 1 MVIKKILNNSAVTTIDDATRIEKVIMGKGIAFQKKPGDILNEEKIEKIFSIENQNENLKF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+S IP+E + + IIS A+ +L K + IYISLTDH FA +R+ + + + N +L Sbjct: 61 QSLISEIPIEHIKVSENIISYAKRKLDVKFDEHIYISLTDHLSFAFRRYSKGIKIKNNML 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R+Y KE+ +G A+ I LG+++ +DE GFIA+H++ A ++ +M++ +T+++ Sbjct: 121 WDIKRIYKKEYNIGMWAVEYIKGELGIKMDEDEAGFIALHIIDASLNESMDNTINITEII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS-INDSDESLQQAVKQNYPQ 239 +L +IK+ FS+ + E+ +SY RL+THLK+ + R++ + I++ ++S + VK NY + Sbjct: 181 DGILNIIKYFFSIEFNEDDMSYDRLLTHLKYFAQRVVSRKNAIDEEEKSFLEIVKTNYKE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++C +I FI Y ++ EI++L ++++RV Sbjct: 241 AYRCVGKIKSFIEKNYDYEVKGGEIVYLTLHVQRVIS 277 >UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria RepID=A4VWG8_STRSY Length = 302 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 99/276 (35%), Positives = 178/276 (64%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++LN+N V+ +++ + ++ G+GI F K+ G+ I S IEK + L + + R + Sbjct: 24 MIIKRVLNHNAVIAQNNKNVDILLFGKGIAFGKKVGDAIPPSSIEKSFLLKNSDNMNRFT 83 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL +P+E++ C++II+L + LG + IYI+LTDH +I+R ++ V++ NPL W Sbjct: 84 ELFIDVPIELVYVCEKIINLGKITLGNHFDEIIYINLTDHINSSIERHKEGVVVTNPLRW 143 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I + Y +EF+LG++AL+II K L V+LP DE FIA+H V+A + ++ +T ++ Sbjct: 144 EIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHFVNANLENIFQESYRITGIIM 203 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQA 240 ++ Q+I+ +S + ++S+ Y R +TH+K + R++E +D D+ L + +K+ YP+ Sbjct: 204 KIEQIIQDYYSTEFNQDSIDYYRFITHVKLFAHRLVEGNEYHDEDDVDLLELMKKKYPRE 263 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +QC R+A FI L+Y +SP+E+++L +I R+ K Sbjct: 264 YQCGTRVADFIRLEYDYLLSPSELVYLIAHIRRLTK 299 >UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterminator n=7 Tax=Firmicutes RepID=Q18DC6_CLOD6 Length = 278 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 160/278 (57%), Gaps = 2/278 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 MN I K+LN++VV+V D + E +++G+GIG+ K+ GE I S + + + + + Sbjct: 1 MNYIIKKVLNSSVVLVHDTKDNEFILLGKGIGYGKKTGEYICGSNDNQMFVPVENTKSKQ 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL+ IP++++ II A++ L ++Y+ L DH FAI+R ++ + + N + Sbjct: 61 FLELMDDIPVDILKITQEIIVEAEKLLNSSFNKNLYLILADHFNFAIERMRKGIKITNRV 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQ 178 W+I+ YP EF++G A+ ++++RLG+QLP++E IA H +A GN D + Sbjct: 121 FWEIKNYYPNEFKVGMVAIYMVEERLGIQLPEEEAANIAFHFANAMASDGNSYDTIKYAK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ E++ + F + ++S+ Y R +TH+KF R + ++ D+ L +K++ P Sbjct: 181 VIGEIINIFIFSLNRTLDKKSMHYMRFITHIKFFVERFFSDSMLSSGDDLLFNQMKRSNP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A ++ F+ +Y +K++ EI FL ++I RV++ Sbjct: 241 KEMLIALKVRDFLEKKYGKKLTNEEIAFLVVHIARVKQ 278 >UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Arthrobacter RepID=A0JW54_ARTS2 Length = 276 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 159/269 (59%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I K+LN++VV+V D+Q E+V++G+GIGF ++AG RI+ +G+++ + + L EL Sbjct: 4 IKKVLNSSVVLVEDEQGVERVLLGKGIGFGQKAGTRIDGTGVDRVFVSLDDINHENLVEL 63 Query: 65 LSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 LS +P+E + +I+S A+ +L IY+ LTDH FA++R ++ +++ N L W+++ Sbjct: 64 LSQVPVEFVELTRQIVSDAESEGLELDPHIYLVLTDHLHFAVERKKRGLVVVNRLAWEMR 123 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREML 184 +YPK++ +G A+ +++ G LP DE IA HL +A+ D V +L+R + Sbjct: 124 TVYPKQYAVGSRAVELMNTHKGFALPDDEAANIAFHLANAERGKAGLDSMRVVELIRAVT 183 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 ++ + + L+ R VTHL++L+ R + D+ L ++ + YPQA A Sbjct: 184 TIVSNTAGVRVDRQDLNSSRFVTHLQYLAERFFTSRLLESDDDFLFHSLSERYPQAIATA 243 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAINIER 273 ER+ F+ ++Q ++ E+ FLA++I R Sbjct: 244 ERVRAFVQKEHQTRLPNEEVAFLALHIAR 272 >UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacterales RepID=B0K352_THEPX Length = 275 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 161/276 (58%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 Q+ K+LNNNV + DD+ E +V+G+GIGF KR G+ I +EK + + + Sbjct: 1 MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQE-RLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 SEL+ I +V+ + II++A++ + KL + I+I+L DH FAI+R + + NP Sbjct: 61 SELMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFD 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LY ++ + +AL +I++RL + LP+DE GFIA+HL +A + + + T+L+ Sbjct: 121 IEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALHLHAALENAGLSNTVKNTRLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++ I+ +S+ Y RLVTHL+F R+ ++A + + L ++K+ + +A Sbjct: 181 SQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTN---ELLVSIKKKFKKA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A +++ I Q+K+ E ++AI+I+R+ Sbjct: 238 YNIAMQVSKIIEDTLQKKVPEEETGYIAIHIQRLIN 273 >UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Enterobacter sp. 638 RepID=A4WFZ1_ENT38 Length = 278 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 149/273 (54%), Gaps = 2/273 (0%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I K LNN++++V D+ +RE ++ G+GIGF +AG +I+ + +EK + S + L Sbjct: 4 IKKSLNNSMLLV-DNDRREMILFGKGIGFGAKAGSQIDLTQVEKVFLPLSDLKSRHFLSL 62 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 IP I++LA+ G KL + +L +H FA++R + ++ N L W++ Sbjct: 63 TDTIPAAFFEISHEILTLARTLCGDKLNSVLLFTLAEHLHFAVERSRSGQVILNKLSWEV 122 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 +R YP+E+ +G +A ++ + GV LP+DE IA HL++A + +L+ + Sbjct: 123 KRYYPQEYSVGMQARANVNAQFGVDLPEDEAVNIAFHLINASGQTDDSSAHQQVELVNRI 182 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 ++++++ S +S++Y R +THL++ + R+L + E Q + ++ P A Sbjct: 183 AEIVRYKLSKAIDTQSVNYMRFITHLRYFAERVLTGKIVVSETEDFYQELMRHRPDAMTV 242 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A I ++ +YQ + E+ +L+I+I R+ + Sbjct: 243 AWVIRDYVQEKYQLTLPKDELTWLSIHISRLME 275 >UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 Tax=Bacilli RepID=A8FJ69_BACP2 Length = 282 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 154/277 (55%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K+LN++VV+ D Q+E V+ GRGIG+ ++ G+ I ++ + + Sbjct: 1 MFKIKKVLNSSVVLAEDQNQQEMVLFGRGIGYGQKPGQMIEEKKADQVFMSVDNMRAKEF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL +P E + RI+ A++RL L +Y +L DH FA++R ++N+ + N + Sbjct: 61 LQLLDSMPQEFIDLTQRIVQYAEKRLNSSLNSGVYFTLMDHLNFAVERHKKNINITNRVY 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 W+I+ Y +EF++G+ AL +++ L +QLPK+E IA HL++A + +D ++ Sbjct: 121 WEIKNYYTEEFEVGKYALELVNDTLSIQLPKEEAANIAFHLINALGEESDSKDSMKYAKM 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ L+++ ++ +E++ Y R +TH+KF R + ++D + L + + YPQ Sbjct: 181 IGSIVNLVRYTLNMKMDQENIHYSRFITHVKFFVERFYANKLLSDQENELFEQIAHLYPQ 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A A +I +I + I E+ +LA++I R+ Sbjct: 241 AMDVAFKIKDYIKQVHSIVIPNDELTYLAVHIHRLMS 277 >UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ6_LACLK Length = 278 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 160/276 (57%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+ NNN ++V D E+ VMG+GIGF+K+ GE ++ + I KE+ L Sbjct: 1 MRILKVFNNNALLVNDRFNNERFVMGKGIGFKKKPGEVVDVTQITKEFTFQKKSSRDSLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ +P E + +I A+E+ + S+Y+SL DH +AI R + + + NPL+W Sbjct: 61 EIYEQLPSEEIDLVAALIKEAEEQFHQTYFLSLYVSLADHIHYAISRTRDGISIKNPLVW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLM 180 ++++ Y KE+ L ++ L I+K +G+ L +DE IA+H V+A Q D +TQ + Sbjct: 121 EVKKFYAKEYALSKKYLIKINKDMGISLDEDEAAAIALHFVNARQEDSPFTDTFEITQFI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQ 239 ++L++++ +S + E+SLS+QR VTHL +L RIL+ + D L + V+ YP+ Sbjct: 181 DDILKIVRLYYSKEFDEDSLSFQRFVTHLHYLGQRILKGKPFKEMEDSFLFEQVQLKYPE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A +C E+I ++ + + EI +L ++++R+ Sbjct: 241 ASKCVEKILFYLSESRKTNLDIDEIAYLTLHVQRLI 276 Score = 45.9 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 L+ +++ + QF Y Y L H+ + R + SI + L VK Sbjct: 69 EEIDLVAALIKEAEEQFHQTYFLS--LYVSLADHIHYAISRTRDGISIKN---PLVWEVK 123 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y + + +++ I I + E +A++ R+E Sbjct: 124 KFYAKEYALSKKYLIKINKDMGISLDEDEAAAIALHFVNARQE 166 >UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostridium butyricum RepID=B1QS11_CLOBU Length = 281 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 157/277 (56%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNNVV+ +D+ E VVMGRG+ F + G+ I I+K + + + Sbjct: 1 MIIKQILNNNVVISENDKNEEIVVMGRGLAFGAKKGQVILEDRIQKVFTDEKNCDFSHFT 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS I L + +I+ + LGK L +SIYI+LTDH ++R N + N +LW Sbjct: 61 KLLSEIDLVNFEFIENLINYVKSTLGKKLNNSIYITLTDHINTLLERAATNAYVKNTMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R+Y EF++ + + I++RLG +E I MH+V+A++ NM+ +T+ M Sbjct: 121 DIKRIYRDEFKIARDVVCRINERLGSNFDDNEAASITMHIVNAELETNMKTAVDITKTMT 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQA 240 ++L ++K+ F + Y EE LSY R VTHL F + R+ + D E L VK+ Y + Sbjct: 181 DILNIVKYHFKIIYDEECLSYYRFVTHLLFFTQRVFNSKTYTDDKETDLFDMVKEKYSEM 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +I F+ +Y + E ++L I+I +V +E Sbjct: 241 YKCTLKIKEFLYDEYNYDLEDEECLYLTIHIAKVVRE 277 >UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria RepID=B4F212_PROMH Length = 284 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 96/279 (34%), Positives = 170/279 (60%), Gaps = 3/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNN+VV+ +D+ ++E +VMG+GI + K+ G+ I S I K++ LS R+ Sbjct: 1 MKIKKILNNSVVISLDEAEKEIIVMGKGIAYAKKVGDEITSEQITKKFILSPKNCPQRVL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS+I L+ + D II A+E++ QDSIYI+L DH Q +I+R+++ + N +LW Sbjct: 61 DLLSNITLDYVEIADNIIQYAKEKMTLDTQDSIYIALIDHIQASIERYKEGTFIRNKILW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ Y +EF +G L +I+ R + +P+DE GFIA+H+ S + + N++ VT ++ Sbjct: 121 EIKNFYSEEFDIGLYGLKLINDRFNISMPEDEAGFIALHIASIRTNDNIQQTYKVTHFIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNYPQ 239 + ++K+ ++ Y SL+Y+R VTHL++ S R+ + + L +K Y Q Sbjct: 181 SITNIVKYYLNIEYDIGSLNYRRFVTHLRYFSIRLFSQPENDHEPLENELLDIIKDKYHQ 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C +I+ FI +Y + EI++L I+I ++ +++ Sbjct: 241 PYMCCLKISKFIKDKYNCTLDDNEILYLIIHIAKIAEDN 279 >UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus RepID=SACT_BACSU Length = 276 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 98/275 (35%), Positives = 170/275 (61%), Gaps = 5/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+LNNN + I + +EK+VMG GI FQK+ + I + +EK + + N + Sbjct: 1 MKIYKVLNNNAAL-IKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDE--NEKFK 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L +P E + + IIS A+ L L D I+I+L+DH FAI+R Q +L+ N LL Sbjct: 58 QILQTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLH 117 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+ LY KE+++G A+ + + LGV LP+DE G+IA+H+ +A+M +M T ++ Sbjct: 118 EIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKMDAESMYSALKHTTMI 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +EM++ IK F+ E S+SYQRLVTHL++ R+ + +++ DE + +++ Y A Sbjct: 178 KEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +QCA +A F+ +YQ + +E ++ ++++R++ Sbjct: 238 YQCALELAEFLKNEYQLHLPESEAGYITLHVQRLQ 272 >UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FGL9_9BIFI Length = 303 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 159/275 (57%), Gaps = 3/275 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNNVV+ D + E ++ GRG+GFQ + G+RI+ S + + + S + Sbjct: 19 TVEVLRVFNNNVVLAKDGK-SEVILTGRGLGFQAKPGQRIDESKVVRRFVPSDGRDPDHM 77 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +ELL+ IP E++ ++ + + ++ ++L DH AI+R + V + PL Sbjct: 78 AELLADIPPEIIRLVAEAMTRIGMGAQVERRPALVMALADHLTGAIRRINKGVNVEYPLQ 137 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 ++Q LY +E++ E+ + I++ LG LP+ EV AMHLV+A + G++ +T + Sbjct: 138 AEVQSLYAREYEQAEKLVAILNTYLGGILPEGEVSAFAMHLVNAGFTTGDLSRTYKITGV 197 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +++ML++I+ + + + S++ R +THL++L RI ++ ++ + + ++K+ Y Sbjct: 198 IQQMLKVIEQSYGVKLDQHSVNVGRFITHLRYLFVRISQNKQLDREPQPIINSIKETYSD 257 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A +CA++IA L+ ++ E+ +LA++I RV Sbjct: 258 AMRCADKIAAVAALRLDAHLTEDEVAYLALHISRV 292 >UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium difficile RepID=Q184X6_CLOD6 Length = 277 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 157/274 (57%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV D+ +E ++MG+GIGF K + + IEK++ ++ E L Sbjct: 1 MVIKKVFNNNVVFARDNSGQEVILMGKGIGFNKFTKDLVEIDKIEKKFIFNNEESLSELH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IPL+ + II + +E LG L DSI I+L++H + +KR + ++ +PL W Sbjct: 61 SLLDRIPLKDVELVSEIIQMGREELGDNLNDSILITLSEHISYMLKRMDEGLVFQSPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I+++YP E+ ++A+ + K+L +P E+ FI +H +AQ+ +M++ +T+++ Sbjct: 121 EIRQIYPNEYNFSKKAVEYLRKKLDKNIPDSEIAFITIHFANAQLETKDMQETLLLTKII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L +IK+ + + E S Y R ++HL+ R L + + D SL +K Y Sbjct: 181 DNVLDIIKYHYGIEINEYSFDYTRFISHLRCFIKRQLSGEN-TNVDTSLLDIIKMKYKSD 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + CA+++ F+ Y+ KIS E+++L +++ R+ Sbjct: 240 YNCAKKVKNFLEKTYKWKISENELLYLTLHLNRL 273 >UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6K4_BIFBR Length = 297 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 152/278 (54%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D + RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLAKD-RGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMA-TCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL-LPNPLL 120 +LL IP E++ + + + ++ ++L DH A++R + + +P PL Sbjct: 60 QLLGDIPPEIIRLISETMDEIGLSSEAAQSSTLVMALADHVCGALRRAKNGIPPVPYPLN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 +I+ LY +E+Q G L +++RL L E A+H V+A S G++ +T + Sbjct: 120 SEIRSLYKREYQQGCALLAALNRRLDDALDPSESVAFALHFVNAGFSTGDLSPTYMMTGV 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++++L +I+ +++ E S++ R +THL++L RI +H ++ E++ ++ +Y + Sbjct: 180 IQQLLAVIESTYNIKLDEHSVNVGRFITHLRYLFVRIHQHEQLSREPEAIVSSIMSSYAK 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A +CA IA I L+ ++ E+ +L +++ RV + Sbjct: 240 ASKCARLIASLIELRLDTTLTEDEVAYLTLHVARVTDQ 277 Score = 41.3 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 101 HCQFAIKRFQQNVLL---PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFI 157 H ++ R Q+ L P ++ I Y K + ++I+ RL L +DEV ++ Sbjct: 208 HLRYLFVRIHQHEQLSREPEAIVSSIMSSYAKASKCARLIASLIELRLDTTLTEDEVAYL 267 Query: 158 AMHL--VSAQMSGNME 171 +H+ V+ Q + N Sbjct: 268 TLHVARVTDQTNQNRS 283 >UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6P9_THEAS Length = 285 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 148/277 (53%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++++K+LNNNVV+ E V++GRGIGF ++ G+ + S EK + L + R Sbjct: 1 MLRVSKVLNNNVVIASHASGWETVLVGRGIGFGRKVGDPVEESWAEKVFVLKDPKERLRY 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++L+ I A + I++ ++ LG L + I+ SLTDH FA+KR ++ + + NP Sbjct: 61 AKVLAEIDGSFAALVAQGIAIMEDHLGVPLGERIHASLTDHLFFAVKRLREGIAVRNPFA 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++ +YPKE + L + + + + +P DE F+A+H+ SA ++ VA +++ Sbjct: 121 REVAAMYPKEHAASQAMLRWLSEEVHLDMPDDEAAFVALHVHSAMGGEDLGRVAWKNRVI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI---LEHASINDSDESLQQAVKQNY 237 E++ + + S Y R + HL F R+ +E D +L++ +K+ Sbjct: 181 SELVAITEESLGFRLDRLSPHYMRFIRHLSFSIDRVEGGIEGDLEGDPISTLEETMKREN 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P + A ++ +++ R I PAE+++L I+I R+ Sbjct: 241 PVPYGIALKLCLYMRNALDRPIPPAEVVYLTIHIHRL 277 >UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridiales RepID=C5EP68_9FIRM Length = 281 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 169/276 (61%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LN N VV +D +RE +V G GIGFQK+ GE++ I+K Y L S E + RL Sbjct: 1 MKIIRVLNTNAVVTLDKDRREVIVTGPGIGFQKKKGEQLAEELIDKTYCLRSGEDSRRLQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +++ + + + R++ A+ K+ D +YI+LTDH A++R + + L N + D Sbjct: 61 QIVQSVSEQYLGIAGRVVDAARNEGLKVNDVLYITLTDHINSAVERLRSGIALKNMMKMD 120 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLMR 181 ++R Y KE+ +G+ A+ + + G+ L DE FIAMH+V++++ + M D+ +T+LM Sbjct: 121 MRRFYEKEYAIGQMAVGRVLEETGIDLGDDEAAFIAMHIVTSELDNSKMMDIQKITELMN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +LQ+++F F + + E+S+SYQR VTHLKF S R+ +H + DS + + Q + +A+ Sbjct: 181 AILQIVRFHFKIEFHEDSVSYQRFVTHLKFFSARVFDHGAYQDSMKEIYQVLVAQNEEAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++A FI QY +S E ++L I+++R+ E Sbjct: 241 SGVRKVADFIKKQYSYTLSVDEQLYLLIHLKRILDE 276 >UniRef50_P15401 Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Bacillus subtilis group RepID=SACY_BACSU Length = 280 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 96/273 (35%), Positives = 170/273 (62%), Gaps = 3/273 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I +ILN+N +VV D Q EK+++G GI F K+ + ++ S IEK + + Sbjct: 1 MKIKRILNHNAIVVKD-QNEEKILLGAGIAFNKKKNDIVDPSKIEKTFIRKDTPDYKQFE 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L +P + + ++IIS A++ L K+ + I+++ +DH FAI+R +++ NPLL Sbjct: 60 EILETLPEDHIQISEQIISHAEKELNIKINERIHVAFSDHLSFAIERLSNGMVIKNPLLN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+ LYPKEFQ+G A +I +LG+ +P DE+G IAMH+ +A+ + G+M +T ++ Sbjct: 120 EIKVLYPKEFQIGLWARALIKDKLGIHIPDDEIGNIAMHIHTARNNAGDMTQTLDITTMI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R+++++I+ Q S+N E+++SY+RLVTHL+F I SI + D + +K+ + A Sbjct: 180 RDIIEIIEIQLSINIVEDTISYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 + CA I F+ +Y + E+ ++A++I+R Sbjct: 240 FLCALSIGTFVKKEYGFEFPEKELCYIAMHIQR 272 >UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7VAG3_ENTFA Length = 281 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 90/277 (32%), Positives = 167/277 (60%), Gaps = 5/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSS--HELNGR 60 M++ K LNN++++ +D Q +E ++MG+GIGFQ + G+ + + I+K + L S L Sbjct: 4 MRVIKTLNNSLILCLDKQGKEVILMGKGIGFQLKKGDLVPADKIQKVFKLDSLSDALKKD 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L P +++ RII A + KL S++ +L DH + AI+R Q+ ++ N L Sbjct: 64 YIKLFEAAPDDLIICVKRIIDYANAKFDFKLNKSLFFTLVDHLKHAIERSQKGIVFQNRL 123 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQ 178 L +IQ+ YPKEF++G A+ +I+K++ VQLP++E G IA H+V+AQ NME+ + Sbjct: 124 LIEIQKYYPKEFEIGCYAIQLINKKMNVQLPEEEAGNIAFHIVNAQSEQANMEETMLSVR 183 Query: 179 LMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++++L ++ + F ++S+ Y R VTHL+F R+++ + + D+ L +VKQ + Sbjct: 184 ALKDILAMLGYLFPEKKVDKDSMLYLRFVTHLQFFIARMIKKEELPEKDDFLLASVKQRF 243 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ ++ A +I ++ + + E+++L ++I RV Sbjct: 244 PKEYRAALKIKEYVQEEMGASANQDELLYLTLHISRV 280 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++ ++ +F + SL + LV HLK R + + L +++ YP+ Sbjct: 79 VKRIIDYANAKFDFKLNK-SLFFT-LVDHLKHAIERSQKGIVFQNR---LLIEIQKYYPK 133 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ I + ++ E +A +I + E Sbjct: 134 EFEIGCYAIQLINKKMNVQLPEEEAGNIAFHIVNAQSE 171 >UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC09_VIBFU Length = 279 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 156/278 (56%), Gaps = 3/278 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYA-LSSHELNGR 60 I ++LNNNVV D+ RE ++ G+G+GF+ + G+ I+ EK + + R Sbjct: 1 MFTILQVLNNNVVSAADESGRELILTGKGLGFKAQPGKAIDPHVAEKVFVLNQGDATSER 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L L+ +PLEV+ + I A++ L K + +++SL+DH FAIKR + + +PNP Sbjct: 61 LKVLMESLPLEVVQMTEFICDEAEKALNRKFGNGLFVSLSDHLDFAIKRSKDGLSIPNPF 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 W+I+ Y KEF+ E + I GV L K E IA+H+++A + N+ D +T++ Sbjct: 121 EWEIRSFYDKEFKFAEGIIQKILLNWGVLLEKSEACSIALHIINAD-NSNLNDFKSLTKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L ++K+ F++ E S +Y R VTHLKF + RI + I + D L + + + Sbjct: 180 VYQILNIVKYVFNVELDENSQNYHRFVTHLKFFAQRIGKKEVITNHDSLLSDLLIKELTK 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 QC + I+ F+ Y +S +E ++L I+I+RV + Sbjct: 240 THQCVDTISEFVRKTYGHPMSDSEKLYLVIHIDRVLND 277 >UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clostridia RepID=C5RMW0_CLOCL Length = 304 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 103/280 (36%), Positives = 172/280 (61%), Gaps = 8/280 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M I KI NNN ++ D E VVMG GI F+K AGE+++ + IEK + L ++ + + Sbjct: 25 IEMIIKKIFNNNAILAKDSDNHEFVVMGCGIAFKKSAGEKVDKALIEKTFILKQNDASEK 84 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 LL +P E ++ C II A+ L KL D IY++LTDH AIK + + + NPL Sbjct: 85 FKLLLEDVPSEYVSLCYDIIQYAKNMLSTKLNDYIYVTLTDHIYNAIKLYDEGLKNLNPL 144 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN---MEDVAGV 176 +W+I++ Y KEFQ+G +AL I++ LG +LP+DE G I +HL++AQ++ + MEDVA Sbjct: 145 IWEIKKFYAKEFQVGLKALEFIEEELGKKLPEDEAGNITLHLINAQLNSSYNKMEDVAEY 204 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T+ ++++L ++ + + + E S+SY+R VTHL+F R+ + I D+ L + +K Sbjct: 205 TKKIQDVLSIVTYTYGITLDESSISYERFVTHLRFFFQRLNKKELIESDDDFLLKKIKAK 264 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Y +A+ C +I ++ +++ E ++L I+I+RV + Sbjct: 265 YKKAYDCMLKIEKYL----DIELTDEEKLYLTIHIQRVTQ 300 >UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lactococcus lactis RepID=Q02YC0_LACLS Length = 284 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 163/278 (58%), Gaps = 2/278 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N++ K+LNNNVV+ + E ++MG G+G+ K+AGE + IEK +AL Sbjct: 4 NVKSKKVLNNNVVIAQNTNDEETILMGLGLGYGKKAGEVVEDKKIEKIFALKVTSEQQNF 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 SELLS IP ++ + A+ + K + D++ ++ DH AI R + N+ + N LL Sbjct: 64 SELLSEIPSGIVELSILTLEKAKTKFDKTISDTVLVAFADHLNAAIIREKDNIAIKNFLL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R +P+EF L E L + ++L + LP+DE GF+AMH+V+ + E +T+LM Sbjct: 124 WDIKRFFPEEFALCLETLQKVKEKLNISLPEDEAGFLAMHIVNGTLGSGHEYATELTKLM 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYPQ 239 E+L +K+ +N+ E+ + +QR +THLKF + RIL + ++S DE L + YP+ Sbjct: 184 EEILTTLKYTLQVNFNEQDIYFQRFITHLKFFTERILSNTKSDESTDEDLFLLITGKYPR 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A+ ++++ F+ ++S E +++ +++ R+ ++ Sbjct: 244 AYIGTKKVSEFLKQTRSYEVSQNEQIYMTVHLARILEK 281 >UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus pumilus SAFR-032 RepID=A8FDU8_BACP2 Length = 280 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 166/279 (59%), Gaps = 5/279 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + K+LNNN+V+ + + Q E VV G GIGF+K+ G+ ++ S I K + + L Sbjct: 1 MFTVVKVLNNNIVLALTEAQNEVVVFGTGIGFKKKKGDTLDESAISKTFYS---DQTSPL 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ IP +++ ++II + +E L K L S+ SL+DH FAI+R ++ + NP++ Sbjct: 58 ESQLTAIPTDILLLTEKIIRVGEEMLNKKLGSSVLFSLSDHLTFAIQRHEEKIAYENPIV 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W+I LY +E+Q+G++ALTII K +G+ E IA+H V+AQ+ G +M D +T L Sbjct: 118 WEIPHLYFQEYQIGKKALTIIQKMMGISFEDTEASLIALHFVNAQIDGQSMGDTIKMTHL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +E++++I+ F + + S++Y R +THL++ R + D+SL++ ++ Y + Sbjct: 178 TKEIVKIIQNIFEMILDKSSINYSRFITHLRYFIVRQETNQPPQQMDDSLKELIQDRYMK 237 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 ++ C I + ++ ++ E++FL I+IER+ KEH Sbjct: 238 SYACGLIIKEMLKREFNWNVTEDELVFLVIHIERITKEH 276 >UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-binding protein n=4 Tax=Enterococcus RepID=C9A770_ENTCA Length = 282 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 158/274 (57%), Gaps = 3/274 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I K+LN++VV+V D + +E + +G+GIG+ K+ G+ I + I++ + + +G+ ++L Sbjct: 4 IKKVLNSSVVLV-DKEGQEMIALGKGIGYGKKVGDSIADTQIDQVFLPIDEKKSGQFADL 62 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 + IPL I+ LAQ+ L L +IY++L+DH FA++R Q+ + + N L W+I Sbjct: 63 VDEIPLYYFEMTKEIVQLAQKMLPYPLNSTIYLTLSDHLHFAVERQQKGLSVTNRLYWEI 122 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMRE 182 + Y EF+ E+AL ++ ++ ++LP++E IA HL++AQ + +D +L+ Sbjct: 123 KNYYTDEFRAAEQALRLLKEKYQIELPEEEASNIAFHLINAQSNTEENQDGLKKAKLIGL 182 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++ ++++ + S+ Y R +TH++F R + + DE L + + YP A + Sbjct: 183 IVNMVRYSIQQDVNTNSIHYNRFITHVRFFVDRFFLDGLLQEEDEGLYRQMWALYPNAME 242 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A ++ +I +YQ KI EI++L ++I R+ Sbjct: 243 IATKVKAYIDKEYQTKIPVNEIVYLGVHINRLMN 276 >UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-binding region n=2 Tax=Bacilli RepID=B1MZ35_LEUCK Length = 286 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 157/276 (56%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K LN N V+ +D+QQ+E ++ G+GIG+ K+ G++++ S + + + ++ Sbjct: 1 MLVKKSLNANAVIAVDNQQQEFILFGKGIGYGKKNGDKVDESIVNQTFMPLNNTEIKEYV 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL IP+ ++ RI+S A++RL KL +YI L+DH FAI+R + + N W Sbjct: 61 QLLEAIPITILDATRRIVSEAEKRLNTKLNPMLYIMLSDHLNFAIERAMTGINITNRAFW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-AGVTQLM 180 +++ YP+EF LG AL +I++++ + LP++E IA HL++AQ + ++ L+ Sbjct: 121 EMKNYYPEEFDLGLFALQVIEQQMNIVLPEEEAANIAFHLINAQTAEGIKKDGLNYANLI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 M +++ N ES+ YQR +THLKF + R + D + L + V YP+A Sbjct: 181 SSMTTILRHSMGQNIDIESVHYQRFITHLKFFAERFFADKMLIDDNSKLFETVATAYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A I ++ Y +K++ E+ FL ++I R+R Sbjct: 241 TEVAFTIKDYLTTVYDKKMTKEELTFLIVHINRLRN 276 >UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria monocytogenes RepID=D2NVK8_LISMO Length = 276 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 155/276 (56%), Gaps = 1/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNN ++V D EK+V+G+GI F KR G I+ +EK + + S E+ R Sbjct: 1 MLRVKRVFNNNTILVHDSNGLEKIVIGKGISFNKRVGNIISEEAVEKTFIVDSPEITERF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSI-YISLTDHCQFAIKRFQQNVLLPNPLL 120 +L+ +P+ + ++II A+ L D + Y+ L DH +AI R++ + N LL Sbjct: 61 VQLIKEVPINHLDLTNKIIKDAESELNVTFDELTYLGLADHINYAISRYKSGHQIKNALL 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I++ YPKEF + ++ I V+L +DE GFIA+H V+ Q G + + T+++ Sbjct: 121 LEIKKFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALHFVNGQQEGIINNTLITTEVL 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +++ S+ EESL+Y R +THL+F RI + + + + V + YP+A Sbjct: 181 KKVLLILEDTLSIKLDEESLNYLRFITHLRFFIERINSEGAREKEEPDMIEQVFKLYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + I+ +I + E+M+L ++++R+ K Sbjct: 241 YASVQIISDYIQETLNCTVYAEELMYLTLHVQRLIK 276 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 E L ++++ + + ++ + E L+Y L H+ + R I ++ L Sbjct: 66 EVPINHLDLTNKIIKDAESELNVTFDE--LTYLGLADHINYAISRYKSGHQIKNA---LL 120 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +K+ YP+ + A+ I K+ E F+A++ ++E Sbjct: 121 LEIKKFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALHFVNGQQE 167 >UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ76_ENTFA Length = 285 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 161/276 (58%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ +ILNNNV + + E +V +GI F+K+ G+ ++ ++K + L S ++ S Sbjct: 1 MKVKQILNNNVAI-LTKGTNEVIVYSKGIAFRKKVGQSVSKEEVDKVFVLDSADVLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL++ + II A+E K D +Y++L DH +A+KR ++ + NPLLW Sbjct: 60 YLLANTEESLFEIVRSIILRAEELFQKKATDYLYLTLLDHIDYALKRGKKGQYISNPLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +++R YPK +QLG E + ++K V P+DE IA+HLV+ Q + N ++ VT++M Sbjct: 120 EVRRYYPKSYQLGVEVVERLNKEYNVSFPEDEAASIALHLVNIQEAVQNSQENEKVTEIM 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++ ++++ ES++Y R + HL++ RIL + + +++D L Q + Q YP+A Sbjct: 180 KDIVSIVQYHLGAPMNHESINYTRFMQHLQYFVQRILTNDTYSENDSELYQQISQLYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + ++I +++ + + IS E +L ++I R+ + Sbjct: 240 YGAVKKIELYVIGTFGKLISEDEKTYLMMHIHRMTE 275 >UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF6_9ACTN Length = 287 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 150/271 (55%), Gaps = 4/271 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 QI K+ NNN V I D ++ ++ G GIGFQK G+ + + IEK Y E + + Sbjct: 13 QIVKVFNNNAVASITDDGQDVILTGAGIGFQKHTGDAVEENAIEKRYYFHDGE-SDSIYG 71 Query: 64 LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L +H P+E I+ A++RL L+D + I+LTDH FA++R + N + + Sbjct: 72 LFAHTPVEFFNISKSIMDEAEKRLHIVLKDQVLIALTDHIVFAVERARNGEGFSNLMFSE 131 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 ++ LY +E+++G + ++++ LG++LP+DE FIA+H+++ Q + V L+ Sbjct: 132 VRGLYRREYEIGLWGIHLVEEALGIRLPEDEASFIALHILNGQSDLSATAVLDTIHLVSG 191 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNYPQA 240 +Q+I+ + + + + LSY RL THLKFL+ RI + D D+ + + + P A Sbjct: 192 CIQVIEELYGITFDSDELSYIRLTTHLKFLAQRIFSGTTDEDGFFDQQMFDLLCERNPLA 251 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +CA +I+ F+ + +S E +L I++ Sbjct: 252 HECARKISAFLKSDFLYSLSDREEFYLMIHV 282 >UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD93_9FIRM Length = 283 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 168/278 (60%), Gaps = 3/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNN+++ D Q E +V G GI FQK+ G+++ S IEK + + +++ + Sbjct: 1 MVIHKILNNNLILSRDGQGHEVIVKGCGIAFQKKKGQQVEESRIEKIFTAENAQISKEIQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP + + + ++ +E+ G KL DSIY SL+DH AI R + + L N LL Sbjct: 61 GYLTAIPEKYLDFVEAFVNDVKEKEGMKLNDSIYFSLSDHIMGAISRLENGIRLQNMLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++LY KE+++G E L +++ V L DE GF A+H V+A+ G + ++ ++ Sbjct: 121 DIKQLYHKEYEIGLELLKKVNEMFEVDLSADEAGFFALHFVNAEDGGKTD-SYQISIIVH 179 Query: 182 EMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L +++ + ++ +QE +L YQR +THLK+ + R L D ++ L + +K+ Y +A Sbjct: 180 QILDIVEKYYDNMEFQENNLYYQRFLTHLKYFAQRFLHKELHYDENQELFKIIKEQYREA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C + I + + +Y+ ++ E+++L I+I+++ ++H Sbjct: 240 YGCVKMIYLMMEEEYKYAMTEDEMLYLTIHIQKITEDH 277 >UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDU2_9FIRM Length = 275 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 156/278 (56%), Gaps = 6/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I + +NN+ V D + +E +V+G+GIGF E + S I++ + ++++ R Sbjct: 1 MRIVRKINNSAAVAQDSRGKELIVIGKGIGFPAVPYELTDMSRIDRTF----YDIDPRYF 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++S +P E++ I AQ L L ++ ++L DH FA++RF+ + L P+ + Sbjct: 57 EMISTLPQEILLASADITEDAQVVLNTTLNSNLPLTLADHLNFAVERFRSGLNLTIPIAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 DI+ LYP EF LG +AL I+ + GV LP E IAMHL++A++ + + + ++ Sbjct: 117 DIRHLYPNEFDLGVKALDILKEYTGVSLPDSEAVSIAMHLINAEIENSEIHSLVKALEIQ 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +++ + +L ++S SY R H+++L R++ S+ + + +YP+ Sbjct: 177 EGVESIVEREMNLKLDKDSYSYYRFTMHIRYLIQRLMSGTQSETGSGSMVKMLANDYPKT 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + CA++IA F+ Q + E+++L ++I RV +++ Sbjct: 237 YICAKKIAAFLQKQENWCCNDEELLYLMLHINRVCQKN 274 >UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clostridiales RepID=A4J1C8_DESRM Length = 282 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 153/275 (55%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 I ++L+NN V+ + ++ +++G+G+GF +++G+ +++ EK Y + + + Sbjct: 8 FTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKAL 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + V+ II LA+ +LG+ L ++++L DH F + R Q + + NP L Sbjct: 68 ALMEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLA 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ +YPKEF + ++ +I +++ + +P +E+GFIA+HL SA+ + ++ +++ Sbjct: 128 EIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSARHNRHVSQSLKHAEVIN 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ I+ QF + L Y RL++HL+ R++ +I + +KQ + ++ Sbjct: 188 RAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIEN---PFLDKLKQEFSNSY 244 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A +++ + + EI +LA++IER+R+ Sbjct: 245 EIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRR 279 >UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leuconostoc RepID=Q03XR5_LEUMM Length = 286 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 163/283 (57%), Gaps = 11/283 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + +I NNNV++ + ++E V++GRG+GF+++ G ++SS IEK Y + Sbjct: 1 MLVKRIFNNNVLLAEN-SEQELVIVGRGVGFKQKIGNTVDSSKIEKTYYPQDENWTRMFN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ I + + IIS A++ LG + I L DH QFA++R Q+N+ + N LLW Sbjct: 60 EMADTISSDYVEIASHIISTAEKSLGLSFDGYLLIGLADHIQFAVERLQKNLPIKNELLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 + + YP E+++G A+ I++++GVQLP+DEVGFIA+ V + N E +TQL+ Sbjct: 120 ETKHFYPDEYRIGALAVAFINEQMGVQLPEDEVGFIALKFVEKRAGPNFNEKATNMTQLI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--------LQQA 232 L LI+ + +L+YQRL+ HL+F R+L+ + + + S L ++ Sbjct: 180 ESALTLIRHDLLPDIDSSNLNYQRLIVHLRFFVDRLLDESHVQKGENSFDNVMSQHLSES 239 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +++ Y ++QCA+R+ + Q ++K E ++L ++++R+ Sbjct: 240 LQERYTSSYQCAQRVINYFEKQTKQKTGVNEQVYLTMHLQRIV 282 >UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGY1_9FIRM Length = 274 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 162/276 (58%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK +NNNV + +D + +E V+ G+GIGF + E + S I K + ++++ Sbjct: 1 MRITKKINNNVALGVDPKGKEVVIFGKGIGFHEIPYELNDLSLISKTF----YDIDPGYL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IP ++ +I+ A+ ++G +L S+ L DH F + R ++++ + NPL Sbjct: 57 ELLSEIPEDIFNVSSKIVDYARSKVGCELNPSLAFMLADHINFGVIRLKKSIDITNPLTN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 DI+ LY E ++G +AL +I++ L ++ PK E IA+H+++A+ M +M + VT+++ Sbjct: 117 DIKYLYKTEMEIGYKALDMIEEDLQIRFPKGEAASIALHIINAEGMQNDMNNTIKVTKIL 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAVKQNYPQ 239 +E+ ++++ F ++S+ Y R V HLK+ R+ E ++DS + L +++K +P Sbjct: 177 KEITKIVEESFDFKIDQDSIDYSRFVIHLKYFVQRVKEPKEKVSDSTKLLLKSIKAQFPD 236 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + C ++I ++ + K S + ++L ++I R+ Sbjct: 237 TYGCFKKIESYLKKTLKLKYSEEDQLYLLVHINRIL 272 >UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=3 Tax=Lactobacillus RepID=C2HQQ4_LACAC Length = 291 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 102/276 (36%), Positives = 154/276 (55%), Gaps = 2/276 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + + I ++LNNN VV D+ R V +G GI FQ++AG I IEK + + Sbjct: 7 IMIVIKRVLNNNAVVAKDELNRTLVALGSGIAFQQKAGHIIPKDKIEKIFYPKDEDATNS 66 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +SE LS I + + DRIIS A GK L D IY+SL DH QFA++R + +L+ N L Sbjct: 67 ISETLSQIDPKYIELSDRIISEAITSSGKKLSDDIYVSLPDHLQFAVERVKNGILIQNKL 126 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 + + YP EFQLG+ L + ++ G+ P DE IAMHL++A+ ++E+ G +L Sbjct: 127 TVETMQTYPDEFQLGKRVLKYLSEKTGLDFPDDEATNIAMHLITAEEGDSLENTEGTIEL 186 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNYP 238 + L++I N S+SY RL+THLKF RI + S +D+ L V +Y Sbjct: 187 INRFLKIISEMLGKNINSNSVSYYRLITHLKFFIQRIKKQQSQKFKADKDLYDMVIHSYH 246 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + A+RIA + + ++S E+MFL I+I R+ Sbjct: 247 KEYIIAQRIAGIVLHDFNYEVSEDEVMFLTIHIHRI 282 >UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillaceae RepID=GLCT_BACSU Length = 281 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 160/277 (57%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + + K+LNNNV++ + E V++G+GIGF K+ + I G +K + L + + Sbjct: 4 SFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQF 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL ++ +++ + +I R L + I+I+LTDH FAIKR QQ + NP L Sbjct: 64 KKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + Q LYP+E+Q+ +E + +I+++ G+ LP+ E+GFIA+H+ SA + + +V +QLM Sbjct: 124 METQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPLSEVNQHSQLM 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++++I+ F + +ES++Y RL+ H++F RI + + ++ + +K YP Sbjct: 184 AQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML-LLKNEYPLC 242 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + A ++ + ++ + AE ++L +++ R+ + Sbjct: 243 YNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNK 279 >UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCP1_BACSK Length = 277 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 157/277 (56%), Gaps = 5/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K NNN+ +V D E VV+G G+GF ++ G+ I+ + + K+Y+ S + S Sbjct: 1 MNLIKSFNNNIALVEDAAGLEWVVIGTGVGFNRKKGDAIDETLVTKKYSAESSSTHP-FS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ +IP+ V +I A+ +G +L D ++++L DH +AI+R + P+ W Sbjct: 60 ELIDNIPVAVFEVAAMMIRKAETIIGVQLSDHLFLALADHLNYAIQRTLDGIDYPHSHPW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++ RLYPKE + +EA+ I+ L V LPK E F+ H V+AQ +M++ +T+++ Sbjct: 120 ELDRLYPKEHKAAKEAVRIVFDELDVLLPKSEESFLTYHFVNAQGQQRHMKETVKMTEVI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI--NDSDESLQQAVKQNYP 238 ++++I+F + L EES Y RL+THL++ R L + + L + ++ Y Sbjct: 180 NRIIKIIEFDYELQLNEESFDYLRLLTHLRYFVLRQLHQEKVEYKQFNPELIELIQGTYK 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +A+QCA +I + QY ++S E ++L ++I R+ Sbjct: 240 KAYQCATKIGRILHKQYGWELSSNEELYLTLHIWRLL 276 >UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bacteria RepID=D1AQP8_SEBTE Length = 285 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 164/275 (59%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++ILNNNVV+V E +V +GI F+K+ G+ I + IEK Y L S+++ S Sbjct: 1 MKISQILNNNVVIVK-RGMNEIIVYAKGIAFRKKVGQVIYENEIEKTYVLDSNDMLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLSH + ++II +++LGK D + ++L DH +FA+KR Q+ + +PL W Sbjct: 60 YLLSHSEPNHITLVNQIIKYGEDKLGKKSNDYLNLTLLDHIEFALKRAQKGQFIRSPLTW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +++R YPK FQ+G AL +I +++G + P DE IA+H V+ + N+++ + + Sbjct: 120 EVKRFYPKHFQIGIYALDLIKEQIGSEFPVDEAVSIALHFVNMEEGKSNLDEAIHSMETL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQ 239 ++++ +I + F + + E SL Y RL+THL++ R+ ++ + DE L Q +K Y Sbjct: 180 KDIISIIHYHFQITFDENSLDYMRLMTHLQYFIQRVSSNSPYSVIGDEVLNQQIKTLYSN 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+ C ++I I++ +Y ++ E +L ++I R+ Sbjct: 240 AYDCVQKIRIYVQKKYNCNLTIDEETYLMLHIHRI 274 >UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Enterobacteriaceae RepID=C6DD15_PECCP Length = 279 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 146/276 (52%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ K LNN++++V D +Q+E +++G+GIGF R G I+ + +E+ + + + Sbjct: 1 MIKVKKALNNSMLLV-DHEQQEMILLGKGIGFGARPGSLIDVTHVEQVFIPLENLKSRHF 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L IP I++LAQ + KL ++ +L +H FA++R + N L Sbjct: 60 LSLTDTIPAAFFDITHEIVTLAQSQYAEKLNSVLFFTLAEHLYFAVERSKTGNHFVNKLS 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 W+++R Y KE+ +G +A + R V LP DE IA HL++A S + D QL+ Sbjct: 120 WEVKRYYQKEYAIGVQAKDRVSARFNVMLPDDEAVNIAFHLINAAGSAEIADAHQQVQLV 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++++++ + N ++ Y R +THL++ S R++ + Q + ++YP+A Sbjct: 180 NRLAEIVRYKLNKNIDVNAVDYLRFITHLRYFSERVIARKIAPGRTDDFYQELLKHYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + I ++ +YQ + E+ +L I+I R+ + Sbjct: 240 MAISWAIRDYVQEKYQMALPKEELTWLTIHISRLAE 275 >UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococcus faecalis CH188 RepID=C7V767_ENTFA Length = 283 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 151/276 (54%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILN N ++ +D+ ++E V G+GIG+ ++ G+ ++ I + + + Sbjct: 1 MIIRKILNPNTILAVDEDKKEYVFFGKGIGYSRKIGQAVDDEEINRVFIPVDNRQIQEYL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L IP +II A++ L KL S++ +L+DH F+I+R + + + N + W Sbjct: 61 RLFDSIPAVYFDITQQIIKKAEKLLNTKLNTSLFFTLSDHLNFSIERHKNGLNILNRVFW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 +I+ YP EF +GE AL ++ K LG LP++E +A H+++AQ ++ + +L+ Sbjct: 121 EIKNYYPIEFSVGEYALKLLKKELGQILPQEEAANVAFHIINAQTIASSTSKGLEYAKLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++K++ +++ E + YQR +THLKF R E I ++D SL + + Q YP+A Sbjct: 181 GGISDIVKYELKMDFDREDVHYQRFITHLKFFVERYYEGKMITENDSSLFEQIAQLYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A + +I + K++ E+ +L ++I R+ Sbjct: 241 LTVAFNVKDYIEIINDNKVTKEEVAYLTVHINRLMS 276 >UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator n=2 Tax=Photorhabdus RepID=C7BJX4_PHOAA Length = 284 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 93/280 (33%), Positives = 170/280 (60%), Gaps = 7/280 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + I K++NNNVV+ ID+ E ++M +GIGF K+ G+R++ I K + + H ++ Sbjct: 1 MLTIIKLINNNVVLAIDENNSEMILMDKGIGFNKKKGDRLHVQDIAKVFTVEKHY---KI 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S++LS IP+ V+ ++II++ + L K L DS+ I+L++H FA +R + + N L Sbjct: 58 SQILSTIPVSVIELTEQIITIGKNFLAKPLNDSLLITLSEHLSFAFERVNKGYQIGNVLQ 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W+I LYP E+++G++AL I+ ++ L + E IA+H V+AQ G M D +T L Sbjct: 118 WEIPHLYPLEYEVGKQALIHINNQIKQPLSQIEASLIALHFVNAQYEGQTMGDTLKLTNL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNY 237 + + ++LI + F +N S++Y R +THL++ R + + + D SLQ+ +++ Y Sbjct: 178 INKTVKLIHYYFHVNLDPTSVNYSRFITHLRYFLIRQNNNDHSSTIEMDFSLQELIEEKY 237 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ CA ++ ++ +YQ K+ E+++L I+IERV + Sbjct: 238 FKSYNCAVKLIKYLREKYQWKVPDDELIYLVIHIERVVND 277 >UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mucilaginosa RepID=D2NQD9_9MICC Length = 289 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 160/283 (56%), Gaps = 8/283 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++I NNNVV+ +D +E V++GRGI F KR G+ I+ S +E+ + RLS Sbjct: 1 MRISRIYNNNVVLTVDHYGKESVMIGRGIAFGKRKGQLIDPSAVEQTFVPEQGMSGERLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LS IP E+++ + S + E +L +S + L DH +A+ R + V + PL Sbjct: 61 MTLSEIPAEILSIATLLESKVRAEGALELSNSFILPLADHLHYAVVRARDGVRVQYPLAP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 ++ LYP+E + G L ++ +RL V+L +E +A+HLV+AQ + +M +T++ Sbjct: 121 EVTVLYPREVEYGRTVLEMVRERLQVELDPNEAIPLALHLVNAQFATADMSQAFRMTEVF 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD------ESLQQAVK 234 ++ ++I+ + +S+S R VTHL++L R ++ D SL A++ Sbjct: 181 AQVFEIIEASYERKIDPDSMSAARFVTHLRYLFVRASRASANRTEDADEVSQPSLLAALR 240 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + P+A+ CA+++ + + +Q ++ ++ E+ +L I+I R+ ++ Sbjct: 241 ADVPRAYACAQKVLLVLQMQLKQSLTRDELTYLTIHIARLARD 283 >UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=Paenibacillaceae RepID=C0ZH78_BREBN Length = 285 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 154/281 (54%), Gaps = 7/281 (2%) Query: 2 NMQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSG--IEKEYALSSHELN 58 IT++LN+NVV+V + +E V+ G+GIGF + G I + +EK + L + Sbjct: 8 TYAITRVLNHNVVLVEEPGSGQEIVLFGKGIGFGAKPGNTIPAHDLRVEKRFRLENESHQ 67 Query: 59 GRLSELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPN 117 + +LS + V+ + II+L A E +L + ++++L DH QFAI R + + N Sbjct: 68 KQYQNILSQVDPAVVGIAEEIIALIASEITPELNEHVHVALPDHIQFAIYRLNNGMEIVN 127 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 P L++IQ LY KE+ L A +I + +P E+GF+A+H+ SA ++ T Sbjct: 128 PFLFEIQTLYTKEYALANRAADMIKNAFDLDIPDSEIGFLALHIHSAISYVPVKKAVQFT 187 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++ E++ LI+ Q ++ + ++ Y RL+THL+F RI + I + L VK Sbjct: 188 NIITELVSLIEEQTAITIERSTIDYVRLITHLRFAVERIRQQKFIKN---PLLDRVKTTM 244 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 P+A+Q A +A +I + + + E+ ++A+++ R+ +++ Sbjct: 245 PEAYQLATELAQYISTRLEIAVPEDEVGYMALHLYRLLQQN 285 >UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=Lactobacillus RepID=Q040S8_LACGA Length = 282 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 151/278 (54%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT+ILNN+ V+ + E + +G+GI + K+ G+ + I K + S L Sbjct: 1 MKITRILNNSAVISENQDHEEIIALGKGIAYGKKVGDEFDKQKIYKIFTPLSDSQRKLLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E + +I+ + +L DS+YI+LTDH +++R ++ + L N +W Sbjct: 61 ETIHETDPIFFQISQKIVDRLKHEENIELADSVYITLTDHLATSVERAKKGLYLSNKFIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YPKE++ G AL ++D + + P+DE GFIA+H++S ++ ++ D + ++ Sbjct: 121 EVKNYYPKEYRYGLWALKLLDAQFDLNFPEDEAGFIAVHIISGELGNDISDFSKSVDFIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA---SINDSDESLQQAVKQNYP 238 + +++++ F ++ +SL+Y R HLKF ++ S D + +K + Sbjct: 181 SITKIVRYYFHIDIDYQSLNYNRFAVHLKFFWKAMMYKKDQSSFGDLSREILNVIKNSDI 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A++CA +I +I +Y +++ EIM+LAI+I ++ Sbjct: 241 EAYKCALKIKEYISEKYNYELNNEEIMYLAIHINKIVH 278 >UniRef50_A3CN37 Transcriptional antiterminator, BglG family, putative n=3 Tax=Streptococcus RepID=A3CN37_STRSV Length = 280 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 93/276 (33%), Positives = 161/276 (58%), Gaps = 8/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+KILNNNVV+ + Q E ++MGRG+ F ++ G+ I IEK+Y LS + Sbjct: 1 MLISKILNNNVVISE-ENQEEVILMGRGLAFGRKVGQEIPDELIEKKYILSENRR----- 54 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P EVM D+I+S A+E+L KL+DS ++++ DH + R + ++ L N L+W Sbjct: 55 QLLMELPAEVMEMSDKIVSFAREKLQKKLKDSAFLAMADHIHGVLLRLEDDIYLKNFLMW 114 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R +P EF++G+ A ++ + +LP DE F+A+ LV+A++ +T +M Sbjct: 115 DIKRFFPIEFEVGQYAKQLLSAYVSKELPDDEAAFMALTLVNAELENGDGTARDLTMMME 174 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQA 240 E++ ++K+ ++ EE + +R +THLKF R+L D D + +K YP A Sbjct: 175 EIMTIVKYSLEISLDEEDIYLERFMTHLKFFCERVLTDNGHRDLEDNEMFDLLKCKYPLA 234 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +IA F+ + S E ++L I++ R+++ Sbjct: 235 YETTRKIAEFLKQTRNYQTSEDEQLYLTIHLSRMKR 270 >UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4QHA6_CORGB Length = 293 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 79/284 (27%), Positives = 150/284 (52%), Gaps = 12/284 (4%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I ++ NNNVV+ + R V++GRG+GF + G + + +++ + S+ + +L+ Sbjct: 8 KIIQVFNNNVVLAENGSDR-AVLLGRGLGFGRAPGAAVQADAVQEYFHPSAIQPPEQLAR 66 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L++ + E+++ + A+ + DS +++ DH +FAI R Q + LPNPL W+ Sbjct: 67 LIAELNPEIISLARELAETAEFMCDVTILDSTVVAMADHIRFAIDRAAQGISLPNPLRWE 126 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-----MEDVAGVT 177 + + YP+EF G +AL I V LP++E +A+H+V+AQ + N M A +T Sbjct: 127 VSQFYPREFAFGRKALAHIKSTTRVSLPEEEAVSLALHVVNAQFAQNTRQDSMARTAQLT 186 Query: 178 QLMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE----SLQQA 232 L+ ++ +++ +S++ R +THL+FL R++ E SL Sbjct: 187 TLLTKVFDVVEAALPDQQIDRDSMTAARFITHLRFLLQRLIGREGKAHEAEKGLISLSSK 246 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 V YP ++ A ++ + + L+ S E ++LA++I R+ K Sbjct: 247 VADEYPVSFSIAGKVIMMLQLELDTTCSEDEAVYLALHIARLMK 290 >UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDI0_9FIRM Length = 309 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 147/277 (53%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI NNN V I D + + ++ G GIGFQK+ G+ ++ + IEK Y E + + Sbjct: 29 MKIIKIFNNNAVATISDNKNDLILTGSGIGFQKKIGDEVDENRIEKRYVYEGGEKDA-MY 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L P E I+ A E L QD I+LTDH FA++R++ LPN +L Sbjct: 88 QLFLRTPEEYFKLSQSIMEKAMEELNISFQDQTIIALTDHICFAVERYETGTELPNLVLD 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY +EF++G ++ I++ L + LP DE G+IAMH+++ + N + QL+ Sbjct: 148 EIKTLYKEEFKIGLWSVKYINQELKIDLPIDEAGYIAMHIINGANNTNSNSTMKMIQLVD 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND--SDESLQQAVKQNYPQ 239 + +I + + ++SL Y RLVTHLKF++ RI + D+ + + + Sbjct: 208 GCVSVISDSLGIYFDKDSLDYTRLVTHLKFMAQRIFSGIHEEEGFGDKEMISFLSNKDTK 267 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C I +I + ++S E+++L I+I ++ Sbjct: 268 ILTCITAIRNYISSTFSYELSEKELLYLMIHIYKIIN 304 >UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Bacillales RepID=C4L0D3_EXISA Length = 282 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 95/279 (34%), Positives = 166/279 (59%), Gaps = 7/279 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++I KILNNN V+V D+ EK+ +G G+ F+K + +N IEK + + N + Sbjct: 1 MIKIKKILNNNAVIVSDE-GEEKIAIGPGVAFKKAKNDIVNPHKIEKLFIMPE---NDKF 56 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LLS IP+E + IIS A++RL + I+I LTDH FAI+R + L N LL Sbjct: 57 QQLLSRIPVEHFTVSEDIISYAEKRLETSFNEHIHIVLTDHISFAIEREMDGISLRNKLL 116 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQL 179 +I+ LY E+++G A+ I ++L VQ+PKDE FIA+H+ + ++ G++ T + Sbjct: 117 NEIKILYRNEYEIGLWAIEHIAEKLNVQMPKDEAAFIALHIHTMKVKGGDLRKTVKQTTI 176 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +R+M+Q I + ++ +E+ LSYQRL+THL+F+ R+ H + DE + + ++ + Sbjct: 177 VRDMIQSISRRLDVSIEEDDLSYQRLLTHLRFVMDRV-NHYDHHTIDEDMLRMIQTKFTS 235 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 A+ CA +A + Y + +E+ ++ ++I+R++ +H Sbjct: 236 AYACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQH 274 Score = 46.7 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 2/107 (1%) Query: 72 VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDIQRLYPK 129 ++ + IS + + D Y L H +F + R + + +L IQ + Sbjct: 176 IVRDMIQSISRRLDVSIEEDDLSYQRLLTHLRFVMDRVNHYDHHTIDEDMLRMIQTKFTS 235 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV 176 + + +++ G+ LP+ E+G+I +H+ Q + + Sbjct: 236 AYACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQHHQKGGNQQ 282 >UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1K5_9CLOT Length = 273 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 73/273 (26%), Positives = 151/273 (55%), Gaps = 6/273 (2%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 ++ K+LNNN V+ +D ++++E +++G G+GF K+ G+R S + Y L E + Sbjct: 1 MYRVIKVLNNNGVLALDMEKKQEVILLGNGVGFGKKMGQRFGGSPDARRYELVKKETSA- 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + ++ I + RII A+ LG ++ I I++ DH A+ R ++ LPNP Sbjct: 60 -LQAVNGIDPVYIEVTARIIEAAEGLLGPIRHDILIAMADHIALAVSRAKEGCELPNPFS 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ +E++ + +I + LGV++ +DEV +I +H+ N+ + +L+ Sbjct: 119 QDIRALFSQEYEAALKGRELIRQELGVEISEDEVSYITLHIHGGLSDENVSQSLELARLV 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ ++ ++ + SL Y RL++HL+++ R + ++ ++ ++N+P+A Sbjct: 179 QDGIRQVEEGMGMTLPAASLGYNRLMSHLRYMIARTRKKEQ---TNLNMGDYARENFPRA 235 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 ++ A ++ IG + + ++ EI FLAI+I+R Sbjct: 236 YEVAAQVCEDIGRKLKCPVAQEEIGFLAIHIQR 268 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 70 LEVMATCDRIISLAQERLGKLQDSI---YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 LE+ I +E +G + Y L H ++ I R ++ + + Sbjct: 172 LELARLVQDGIRQVEEGMGMTLPAASLGYNRLMSHLRYMIARTRKKEQTNLNMGDYAREN 231 Query: 127 YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 +P+ +++ + I ++L + ++E+GF+A+H+ A G Sbjct: 232 FPRAYEVAAQVCEDIGRKLKCPVAQEEIGFLAIHIQRAAGQG 273 >UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI7_LACPL Length = 277 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 156/276 (56%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++I K+LN++VV+V D+ +E +++G+GIG+ K+ G I + + S +L Sbjct: 1 MLRIKKVLNSSVVLVTDEHDQEFILLGKGIGYGKKPGAVIMDGDFNQVFVASPDPNVEQL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ +++ I+S A E+L KL D++Y++L DH +F ++R + +++ N + Sbjct: 61 LATIASSSPQLIEITQTIVSEATEQLQSKLSDTLYVALLDHLKFTLERAAKGIVITNRVY 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W+I+ Y EF++G+ A+ ++++ + E IA H+++A+ + +D QL Sbjct: 121 WEIKTYYSHEFEIGQLAVRLVNRAFKTDFSEQEAANIAAHIINAENGTDERKDALKAGQL 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ ++K+Q E L+YQR V H+KFL R + ++D+D ++ VK + Sbjct: 181 IGRIINIVKYQTGGIVNEHDLNYQRCVVHVKFLVERAIAGELLDDADPAMVAIVKSQNSR 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A+ A ++A ++ ++++ + E+M +A+ I+R+ Sbjct: 241 AFAIAGKVAAYMSMKFKMPLPDEEVMLMAMQIQRLL 276 >UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Clostridium difficile RepID=C9XM49_CLODC Length = 282 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 163/277 (58%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITK+LNN++++ DD E ++MG+GIG +AG +N IEK + L + + Sbjct: 1 MYITKVLNNSLLLAKDDNDEEIILMGKGIGHNYKAGSELNKKDIEKIFVLHDENIKKSII 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L + I E II+ E+ KL + IY++LTDH FA++RF++ +++ N L+ Sbjct: 61 QLATEIDAEYFGIAQMIIAYGIEKYNLKLMNHIYLALTDHIAFAVRRFKEGIMIENHYLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT-QLM 180 +I+ PKE+ +G+ A+T+ + LG+ LP++E+G IA H ++AQ D + +++ Sbjct: 121 EIKEFNPKEYDIGKYAITVFKEVLGLDLPEEEIGNIAGHFINAQQDNPYSDRNKRSAKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +LQ++ + FS+ Y +ES Y+R V HLK S R L + + + + + V++N + Sbjct: 181 NAILQIVHYHFSIVYNKESFYYRRFVMHLKAFSQRFLANEPSREKIDFIYEQVQKNCKEE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +++ ++ +Y R++ E ++L I+I ++ E Sbjct: 241 YECVKKVGAYMYKEYSRELPRQEELYLMIHIHKILGE 277 >UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKZ8_CORK4 Length = 290 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 144/284 (50%), Gaps = 9/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LNNNVV+ D E V+ G G+GF K+AG+ ++ S +++ + + Sbjct: 1 MKIVRVLNNNVVLATRDDGGEVVLTGWGLGFGKKAGQPVDKSNVKQVFVPEHGRNVDNMG 60 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKR---FQQNVLLPNP 118 LL+ + L+ + ++ +A + + + I+L DH Q ++ R + +P Sbjct: 61 SLLASLNLDYVDLATNLVDGVAGSLVPHPESATVIALADHIQMSVTRQGLADAHANDGHP 120 Query: 119 LLWDIQRLYPKEFQLGEEALT----IIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDV 173 L +++ LYP E+++ E L + +R LP E I +HLV+A + + D Sbjct: 121 LEAEVRHLYPDEYRVAERMLAETNAWLARRRQPPLPHAEATAITLHLVNAAFHTDDLSDT 180 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +T L ++ ++ + +S++ R +TH+++ R+ +N+ L+ ++ Sbjct: 181 YTMTGLFSQLFDIVDSSLGITMDRKSVNAARFITHMRYFFVRVRNGNQLNEGMSVLRDSL 240 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 Q++P A CA+R+A + L+ +++ E +LA+++ R+ E Sbjct: 241 GQSHPDAVLCADRLASVLELRLDTELTDDERAYLALHVARLSVE 284 >UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKZ6_PEDAC Length = 284 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 161/277 (58%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNNV ++ E + GI F+K+ G++I I K Y L S + LS Sbjct: 1 MKVKKILNNNVAIISKGTH-ESIAYSPGIAFKKKIGQQIEEKEISKLYVLDSKDRLEHLS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+H +++ ++I+ + L K+ D +Y++L DH FA+KR Q+ + +PL+W Sbjct: 60 FLLTHSDKKIITLVNKIVDYGENYLKVKVTDYLYLALLDHISFALKRGQKGQFIASPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+ +++G +A+ +++ V P+DE I++H ++ Q N+E ++ Sbjct: 120 EVKKFYPQYYEIGIKAINWLNQTYEVNFPEDEAIPISLHFINVQDEQINVEQKVKDITVL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQ 239 R++L +IK+ F++N+ E S++Y RLVTHL++ R+ H +D L + ++ YP+ Sbjct: 180 RDLLNIIKYHFNINFDETSINYMRLVTHLQYFIDRLNCHELSTKTDVNVLYEQIRTIYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++ ++I +I + ++I P E +L I+I RV Sbjct: 240 AFRAVQKIDKYISKSFGQEIFPDEYTYLMIHINRVTS 276 Score = 43.6 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + L+ +++ + + + Y L+ H+ F R + I L Sbjct: 63 THSDKKIITLVNKIVDYGENYLKVKVTDY--LYLALLDHISFALKRGQKGQFIAS---PL 117 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 VK+ YPQ ++ + ++ Y+ E + ++++ V+ E Sbjct: 118 VWEVKKFYPQYYEIGIKAINWLNQTYEVNFPEDEAIPISLHFINVQDE 165 >UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SK7_SYMTH Length = 275 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 146/275 (53%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+ K LNNNV++ D +E VV+GRG+GF+ R + IEK + L R Sbjct: 1 MRPLKALNNNVLLAYDPACGQEVVVVGRGLGFRVSGPIRPDDPRIEKVFRLDESRNRKRF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + +V+ + I++LA R G L + +++L +H + R ++ + +PNP L Sbjct: 61 LRLTETLSGDVIGVAEEILNLAAARFGPLGEEAHLTLAEHLAATVDRVRKGMPIPNPFLA 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 IQ LYP+E+ L +A+ +I RLGV LP++E G +A+HL+ A + + +A L+R Sbjct: 121 QIQLLYPEEYALAGQAVEMIASRLGVTLPEEEQGILALHLLGAWRRESPKVMARHQALIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + + +++ ++ R++ HL+ I+ + + + ++ YP+ + Sbjct: 181 ESAAFLAAEAGISWSDDDPRLSRVLLHLRLAIDLIVSGKAETN---PVLDRIRSEYPEEF 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A R+ ++ + +R +S E+ +LA+++ R++ Sbjct: 238 ARARRLGDYMAQRLERPVSDDEVGYLALHLLRLKN 272 >UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium difficile RepID=Q184L9_CLOD6 Length = 278 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 166/276 (60%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNNVVV + E +V G G+GF+K+ G+ I+ + I K+Y + + + + Sbjct: 1 MNIKKIFNNNVVVSSLEDGTEIIVTGAGVGFKKKVGDLIDENLISKKYFVQD-DQRDKYN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L+ +E + II A E L ++ DSI ++LT H +FA++R +Q + LPN +L Sbjct: 60 QILNKTSIEYFKISEEIIEKANEVLNTQVNDSIILALTSHIEFAVQREKQGIKLPNLILN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++LY +EF+ G A+ I+KR+G++LP+DE G+IA+H+++ + ++ + + + Sbjct: 120 ETKQLYREEFEFGLWAIDEIEKRIGIKLPEDEAGYIAIHIINGLENSQKDEGINILEFSK 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 +++Q+I+ SL+Y RL+THLKF RIL + NDSD E + + V +NY + Sbjct: 180 QVIQIIEEVHGFKLDVNSLNYTRLITHLKFFVQRILRKETYNDSDIEDMYKLVNKNYNKP 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E IA + +++ KIS E ++L I+I ++ Sbjct: 240 KVCTEEIAALVLDRFEYKISKEEELYLMIHINKITN 275 >UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBZ8_9FIRM Length = 341 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 156/274 (56%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ K+ NNN V V+ RE +++G G+GF +R G+ I+ S + K Y + + EL + Sbjct: 70 MQAVKVFNNNAVSVVMPDGREAILVGNGLGFGRRPGDVIDKSRVSKVYYVQN-ELQTKFL 128 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++L ++ +VM +RI A+E+ L ISL DH FA++R ++ LPN +L + Sbjct: 129 KMLDNVTPQVMQAAERISLAAEEQGILLSSKSTISLVDHISFALERVEKGTFLPNLMLSE 188 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 + LYPKE+ +G+ AL ++ + GVQLP+DE G+IA+HLV+ G + + ++ Sbjct: 189 TRMLYPKEYAVGQRALELVRQFCGVQLPEDEAGYIALHLVAGAADGAL--AYDTVKFVKA 246 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQAW 241 + ++I + ++EESL RL HLKFL+ RIL H D+ ES+ + Q + Sbjct: 247 VKEIICDTYHCTFEEESLETTRLTVHLKFLAARILRHTPWQDAGLESMYTVLLQRDSRNE 306 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 C +RI ++ ++ ++ E ++L I++ ++ Sbjct: 307 VCLQRINAYLRQEFDYELDHQEQVYLLIHLTKIV 340 >UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exiguobacterium RepID=B1YKV9_EXIS2 Length = 285 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 149/277 (53%), Gaps = 3/277 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGR 60 + K+LNNNVV+ +E +++ +GIGF ++ G+++ + +EK Y L + + Sbjct: 5 MYHVIKVLNNNVVICSTGANQEVIILAKGIGFGRKPGDQLTDLDKLEKVYTLKDKDEQAQ 64 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ H+ +A + I+S+ + R GK + + I+I LTDH F KR +Q + + NP Sbjct: 65 YKALVGHLDENFIALMNEIVSMIETRFGKRVDEHIHIGLTDHLTFTFKRLEQGMEVTNPF 124 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L + + LYP+E+ L EE + I + LP E GFIA+H+ SA ++ +V QL Sbjct: 125 LAETEALYPEEYALAEEIVEFISAEMNFYLPPAETGFIALHIHSATNFKDVLEVNRHHQL 184 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + I+ + + +SL Y+RL+ HL+ R+ + ++ E +++ +++ YP Sbjct: 185 VGLIASHIEQRLQIKIDRKSLDYKRLIRHLRSAIERVSNGEYL-EAPEKVEKLLREEYPL 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A + + Q ++ + E +L ++++R+ + Sbjct: 244 CYDTAWELMSIMERQLKKAVPRGEATYLTMHLQRLVQ 280 >UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Corynebacterium glutamicum RepID=Q8GGK1_CORGL Length = 289 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 153/284 (53%), Gaps = 10/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ ++LNNNVV+ I D E V+ G G+GFQK+ GE ++ S + + + ++ ++ Sbjct: 1 MKVLRVLNNNVVLAIKD-GAEVVLTGWGVGFQKKPGEDVDQSKVTQVFVPENNRDADHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLL---PNP 118 LL+ +PLE + +I+ L + + ++L DH Q A+KR L PNP Sbjct: 60 SLLAEVPLEYLDLSTELIASVSAELDSPVGSATVVALADHLQMAVKRNGLEPELTSKPNP 119 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQ----LPKDEVGFIAMHLVSAQMS-GNMEDV 173 L ++ LYP+E +L E L + L + LP EV I++HLV+A ++ + Sbjct: 120 LSAEVHHLYPEETRLATEILERTNNWLAEKGTPPLPPAEVVAISLHLVNAGFRTEDLAET 179 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +T + ++ ++I F + +S++ R +TH+++ R+ +ND L+ ++ Sbjct: 180 YVMTGVFEQLFEVIDSSFGITLDRQSVNAARFITHMRYFFVRVHHDGQLNDGMSVLRNSL 239 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + ++P + CAER++ + L+ ++S E +LA+++ R+ ++ Sbjct: 240 EISHPDSVACAERLSQILSLRLGAELSSDEQTYLALHVARLAED 283 >UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED34_9ACTN Length = 302 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 151/282 (53%), Gaps = 9/282 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M K LNNN V+ D Q R+ + MGRG+GF + S IE + ++++ + Sbjct: 22 FTMLAIKKLNNNAVLCRDGQGRDVIAMGRGVGFGGDFPRELPLSKIEHTF----YDIDPK 77 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +++ +P +++ +++ + L L + + + DH FA+ R Q+ V + PL Sbjct: 78 GQDVMRDLPSDIVMFAAKVMDIVANELPYDLSTNATLFMADHLSFAVARAQKGVRIAMPL 137 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ- 178 ++++ YPKE++ + + ++K LG +LPKDE+ IAM+LV+A++ ++ A T+ Sbjct: 138 AYEVRETYPKEYKAAQFIVMRLEKELGERLPKDEIASIAMNLVNARVVEAVKATAEPTKQ 197 Query: 179 ---LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 ++ +++++++ F + +S + R THL++L RI S+N ++ + + ++ Sbjct: 198 FDDMLEDVIEILESDFRIIVDRDSFDFTRFATHLRYLFKRIQAGESLNSANMQMYKNFRE 257 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +PQ +C + I + + +S E ++L I++ R+ + Sbjct: 258 EFPQLAECVKHIGSYCRETWDATLSEEEELYLMIHLNRIISK 299 >UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XP64_9CORY Length = 287 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 151/285 (52%), Gaps = 15/285 (5%) Query: 3 MQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 MQI ++ NNNVV+ + E V GRGIGF K+ G+ ++ + + + + + Sbjct: 1 MQILRVFNNNVVLARSGEHGGEVVATGRGIGFGKKQGDVLDPATVTRVFVPAEGRDPDHS 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDS-----IYISLTDHCQFAIKRFQQNVLLP 116 +++L+ +P E +A ++ A E +G DS + +++DH +FA R L Sbjct: 61 AQMLAGLPAERVA----QVAAALEAVGAPADSRNRLTLVTAISDHIEFAAARAASGEELN 116 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGV----QLPKDEVGFIAMHLVSAQMS-GNME 171 PL ++ LYP+++++G E L I++R +LP E +A+HLV+A S G++ Sbjct: 117 YPLRSEVLHLYPRQYEMGVELLAEINRRQRAAGAAELPDSEATALALHLVNAGFSTGDLA 176 Query: 172 DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 +T ++++ML+++ S+ S+S R +TH+++L R+ ++ L + Sbjct: 177 QTYQMTGVIQQMLEIVAAGLSITLDTASISVARFITHVRYLLVRLSHGRQLDHDQSPLTR 236 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + YP+ CA ++A + L++ ++ +I +L ++I R+R+ Sbjct: 237 QLLDAYPREVACARQVATVVELRFDCALTEDKIAYLGLHIVRLRE 281 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 75 TCDRIISLAQERLGKLQDSIYISLT---DHCQFAIKRFQQNVLLPN---PLLWDIQRLYP 128 +++ + L D+ IS+ H ++ + R L + PL + YP Sbjct: 184 VIQQMLEIVAAGLSITLDTASISVARFITHVRYLLVRLSHGRQLDHDQSPLTRQLLDAYP 243 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 +E + T+++ R L +D++ ++ +H+V + + M Sbjct: 244 REVACARQVATVVELRFDCALTEDKIAYLGLHIVRLRETQRMSQ 287 >UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMV1_9FIRM Length = 272 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 150/277 (54%), Gaps = 6/277 (2%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 +I K+LNNN ++V+D + +RE +++G GIGF R GERI S+G K Y L + + + Sbjct: 1 MYRIIKVLNNNGILVLDVESRREVILLGNGIGFGHRTGERIESTGQAKRYELVTGKTSA- 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + ++ I + RII A+ +G L I I + DH A+ R ++ LPNP Sbjct: 60 -LQQVNSIEPVYIEAAGRIIEEAEGTMGVLSHDILIPMADHIALAVSRAREGRELPNPFR 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ E+Q + + II + GV + +DEVG+I +H+ + N+ + +L+ Sbjct: 119 HDIKALFSSEYQSAMKGVAIIRELTGVTISEDEVGYITLHIHAGLSEENVAAAMDMARLV 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ + I+ + N +SL Y RL +H++++ R + +Q + ++P+ Sbjct: 179 QDSMHQIESRMGFNLASDSLGYNRLASHVRYMIARARKGERAG---LDMQDYARTSFPKP 235 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ AE++ + + ++P E FLAI+I+RV ++ Sbjct: 236 YEVAEKVCRDMEKRLGLPVAPEETGFLAIHIQRVMQQ 272 >UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillaceae RepID=A4ILQ1_GEOTN Length = 298 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 156/277 (56%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + ++ K LNNNV++ E V++G+GIGF K+ G+ I S +EK + L + + Sbjct: 17 SFRVEKALNNNVLIASHPAYGEVVLLGKGIGFGKKKGDEIAESTVEKCFVLKNEREQEQY 76 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL + E +A + +I ++R+G L + I+++LTDH F +KR +Q + + NP L Sbjct: 77 KKLLPELSEEFIALMNEVIQHIKQRVGVPLNEHIHVALTDHIAFTLKRLEQGLDVKNPFL 136 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LYP E+++ E +I +LGV LP+ EVGFI +H+ SA ++ + +QL+ Sbjct: 137 VETKSLYPLEYEIAAEVAELIGDKLGVALPEGEVGFITLHIHSAISKQSLAEANQYSQLI 196 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++++K Q ++ ES+ Y R V HL++ R+ + + L + +K+ YP Sbjct: 197 AKLVEIVKQQLGVDIDRESIHYLRFVRHLRYAIDRLKKGEKVEKPKN-LSKILKEAYPLC 255 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + A ++ + Q AE ++L ++++R+ ++ Sbjct: 256 YNLAWKLVKVMQQTLQLPADDAEAVYLTLHLQRLAEK 292 >UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9A6G2_ENTCA Length = 278 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 163/278 (58%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I KILNNN V+V D ++ + +G G+GF+ + G+ + S IEK + L ++++ R Sbjct: 5 LKIKKILNNNAVLVGQD-GKDFIWIGTGLGFKMKPGQTADESKIEKVFVLHKNKVSERFL 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS IP ++ D IISLA+ + +L +++Y+SLTDH K +Q + + N L W Sbjct: 64 SLLSSIPTNYVSLADDIISLAKAEIKQELSETLYVSLTDHLYNLFKLHEQGITVTNRLSW 123 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED---VAGVTQ 178 +I++ YP+EF++G++AL +I + G+ ++E G IAMHL++AQ++ ++ V + + Sbjct: 124 EIKKFYPQEFEVGKKALEMIGQETGIVFEEEEAGNIAMHLINAQVTDEVDQPKDVQSIAK 183 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +R+++ LI+F + E SL++ R +THL+F R+ + ++ L V Y Sbjct: 184 KIRDIISLIRFSNKIQIDENSLAFDRFITHLRFFFQRLKARPDVVKAN-PLLGHVSGQYA 242 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++ I ++ ++ E ++L ++I+++ + Sbjct: 243 DAYKTMLLIEKYL----DVPLNDDEKLYLTLHIQKLIE 276 >UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTN7_PAESJ Length = 286 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 150/276 (54%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQ-REKVVMGRGIGFQKRAGERIN--SSGIEKEYALSSHELNG 59 ++I +I+ NNV++ ++ + RE V+ G+GIGF + + I+ IEK Y L + Sbjct: 7 LRIDRIVGNNVILTMEPKSSREYVLFGKGIGFSCKGQKFIDAEDPRIEKRYRLDDRDKAL 66 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 LL + EV+ ++II +ERLG + +Y +L H QF + R + + + NP Sbjct: 67 HYHSLLEELDPEVVQISEQIIDEIRERLGTPVDPKVYFALPSHIQFVVYRLRNGMEIVNP 126 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L++ + YP+EF++ +A +I ++ + +P+DEVGF+ H+ SA S + +T+ Sbjct: 127 FLYETKMCYPQEFKIAAKAAKMISEKFDITIPEDEVGFLTYHVYSAAGSVTAGQMVQLTE 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 LM E+++ I+ ++S Y RL+ HL+++ RIL++ + +K P Sbjct: 187 LMNEIVERIEGWREAPLSKKSSDYARLIMHLRYMMERILQNKETEN---PFSAEIKDKIP 243 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Q AE IA IG + K+S EI +LA+++ R+ Sbjct: 244 TEHQKAELIAQMIGERLNVKVSSDEIGYLAMHLYRL 279 >UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium perfringens RepID=Q0TV06_CLOP1 Length = 282 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 150/276 (54%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRL 61 ++ + NNN+V+V DD ++E ++ +GIGF + G I + IEK + + Sbjct: 9 YEVKRAFNNNIVLV-DDDEKEIILFAKGIGFNCKKGSIIPENTNIEKIFTIQDENNIANF 67 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ + +A C+ +I + L + I+I L DH FAI+R ++ +L NP L Sbjct: 68 RRVVGSNDEKFIAFCEELILEISRDFSEELNEIIHIGLIDHISFAIERMKKGEILRNPFL 127 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LYPKEF+ + + ++ GV + DE+GFIAMH+ SA+ +G + T + Sbjct: 128 VEIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIAMHIHSARTTGKISHTIKFTYIA 187 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ I+ F++ SLSY R ++HL+F R++ + + + L +K YP++ Sbjct: 188 NTAVEYIEDAFNIEVDRTSLSYARFISHLRFAIERLINNTPVKN---ELLSIIKLKYPES 244 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ AE I I + +++ EI +LA+++ER+RK Sbjct: 245 FKVAEEIGKAINEDFSLEVAEDEIGYLALHVERIRK 280 >UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=B1IKY9_CLOBK Length = 285 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 157/276 (56%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERIN-SSGIEKEYALSSHELNGRL 61 Q+ K+ NNNV++V ++ EK++ +GIGF K G+ I I+K + + + Sbjct: 9 YQVIKVFNNNVLLVCKNK-EEKILFSKGIGFGKHPGDNIPFDIKIDKIFTMQNENNFNNF 67 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+S++ +++ C+ +IS+ + L + L + I++SLTDH + IKR +N + NP L Sbjct: 68 KFLMSNVDSDIIGLCEEVISMISDELNEPLNEKIHVSLTDHISYTIKRLMENNSIENPFL 127 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LY +EF + ++A+ +++ RL + +P +E GFI +H+ SA+ G + + L Sbjct: 128 VETETLYKREFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSARNEGKLSNTIKYAFLS 187 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L++ + ++ + SL Y R +TH++F RIL + I + L A+K Y + Sbjct: 188 NTIIELLEDELNMEIDKSSLDYARFLTHIRFAIERILNNTPIKN---ELLTAIKNQYKIS 244 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ A++++ I + +S E ++AI+IE+ R Sbjct: 245 YKLAKKVSKIIEDELSVNVSKEETAYIAIHIEKFRS 280 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L E++ +I + + E+ L H+ + R++E+ SI + + Y Sbjct: 81 LCEEVISMISDELNEPLNEKIH--VSLTDHISYTIKRLMENNSIEN---PFLVETETLYK 135 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + A++ + + I E F+ ++I R E Sbjct: 136 REFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSARNE 174 >UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clostridium RepID=A6M213_CLOB8 Length = 284 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 158/274 (57%), Gaps = 6/274 (2%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRLSE 63 I K NNN+V V + +E+++ +GIGF +++G+ I + +EK + + + + Sbjct: 10 IIKSYNNNIVSV-NMNGKERILFAKGIGFGRKSGDTIEKGTEVEKIFVIEDEDNLRNFKQ 68 Query: 64 LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ ++ E C+++IS L + L + I+++L DH FA+KR + NP L + Sbjct: 69 VIENVDEEFFVLCEKMISYVANELKENLDERIHVALVDHLNFAVKRLSDKEEIENPFLME 128 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ LYP+E+ L E+ ++ V++P+ E+GFIA+H+ SA+ SG + + T L+ Sbjct: 129 IRALYPQEYSLAEKVAEVLQNEKKVKIPEGEIGFIALHIHSARNSGKLSNTIKNTHLINS 188 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +++ ++ + + + SL Y R +THL+F RIL+ SI + + +K Y +++ Sbjct: 189 IIEYVEAKTEIKIDKTSLDYARFLTHLRFAIKRILDDISIEND---FIKEIKSKYKLSYK 245 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +A + L+ ++K+S EI +LA++IER RK Sbjct: 246 VSKGVAKILVLKLEKKVSDDEIAYLAMHIERFRK 279 >UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFD9_9FIRM Length = 280 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 94/279 (33%), Positives = 167/279 (59%), Gaps = 6/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K++NNNV+ VI + EK++MGRGIGF+K+ G+ + + IEK + + + + Sbjct: 1 MIVGKVINNNVISVI-ENNVEKIIMGRGIGFKKKKGDIVEENKIEKIFIIENEFNAIKFK 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+++IP++ M D II A++ L K D +YI+L DH AI R ++ + + N L+ Sbjct: 60 ELMANIPMDCMLIADDIIIHAKKILKRKFSDLLYINLADHIDAAINRVEEGITIKNLLII 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 D++R YP+EF+LG+ L II+ + GV LP+DE GFIA+H+V+A+ + +V + +++ Sbjct: 120 DVKRFYPEEFELGKYGLNIINNKFGVSLPEDEAGFIALHIVNAEEKYEDKNEVIKMFEII 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAVKQNY 237 + +++ ++++ + E ++ Y R +THLKF + R+L N + D L V + Y Sbjct: 180 HLIEDIVRNEYNVIFDESNVYYFRFLTHLKFFAERLLSKGKYNSEKNLDYDLFDTVIKKY 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A +C I + Y IS E M+L ++++R+ Sbjct: 240 KEANRCVGVIKNVLNDMYGYDISVEEEMYLTLHVQRLIS 278 >UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y734_9FIRM Length = 303 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 1/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + ITK++NNNVV D RE +V G+ +GF K+ GE I++S I K + S + L Sbjct: 14 HYVITKLINNNVVFSTDAGGREIIVFGKAVGFGKKRGEGIDNSKIIKVFEPSDTKEKNFL 73 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ I + +II+L + RL K+ + ISL+DH A++ Q+ +P +L Sbjct: 74 MNLVEDIDPVYIDITTKIIALFESRLHCKVNVMMNISLSDHIHNAVRNKQEGFQVPLDIL 133 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +++ +YP+EF + +E L +I+K L +DE G+I +H ++AQ D Sbjct: 134 EEVKTMYPREFLIAKEGLDLIEKETRTTLSEDEAGYIVLHYINAQGQHFRSDAKIRLLFQ 193 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++Q I+ + + S+ Y R +THL FL+ R+ + + S +L + Q YP+ Sbjct: 194 EHVIQKIEQVYDVKLDHLSVYYSRFLTHLSFLAARLHDGQLLEASQSTLYPLLVQKYPRL 253 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E IA I ++ + E +LA++I + K Sbjct: 254 EACTEMIAEIILNEFHMPVGEEEKGYLALHIHNLLK 289 >UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B732 Length = 280 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 153/274 (55%), Gaps = 6/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ LNNN VV D+ +E +++G+GIGF+++AG+ I + G K S E N Sbjct: 11 YEVIGTLNNNGVVAKDELNKEVILLGKGIGFKRKAGDVIENPG--KNIKCYSLEKNT-GK 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +L + + + II A++ G + I + L DH F+I R + ++++ NPL D Sbjct: 68 NVLQGVDPIFLEIANEIIRYAEKEFGDIDTKILLPLADHIAFSIDRIKNDMVISNPLTSD 127 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ E+++ +A II +RLG ++ DE+G+I++H+ +A S V ++ + Sbjct: 128 IRLLFADEYEVATKARKIIKRRLGYEITDDEIGYISLHIHAALSSQPPARSLQVASIIHQ 187 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + ++ F++ E+S++Y RLV H+KFL RI + S+ K+ +P+++ Sbjct: 188 TVTYVEETFNIVIDEDSIAYIRLVNHIKFLMVRIDRKEDVQ---VSMTDYTKEKFPESYA 244 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A R+A +I KIS EI +LAI+IER+R+ Sbjct: 245 VACRVADYIEKLILEKISDEEIGYLAIHIERIRQ 278 >UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBW1_MACCJ Length = 283 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 161/276 (58%), Gaps = 6/276 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSG---IEKEYALSSHEL 57 M + K+LNNNVV+ D+ E +++G+GIGF K++G + S IEK + L S Sbjct: 1 MKYHVLKVLNNNVVITEGDEG-ETILIGKGIGFGKKSGAVLKDSELEHIEKIFKLKSSSE 59 Query: 58 NGRLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 R LL+ EV+ T +I + G++ D+I +SLTDH FA+KR+Q+ +++ Sbjct: 60 QERYKSLLTLTNDEVIQTVIEVIEFIDHKTNGEMNDNILLSLTDHIIFALKRYQEGIIVA 119 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV 176 NP L + + LY +EF + E+ + +++ RL VQ PK EVGFIA+H+ S+ + ++ D+ + Sbjct: 120 NPFLKETESLYRQEFLIAEQVVAMLNDRLQVQFPKTEVGFIALHIHSSVNNHSLRDMRLM 179 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T++++ + +I+ + ++S++Y R + H+ F R++ + + ++L+ +KQ Sbjct: 180 TEVVQNAITIIEQDLKVIVDKDSITYSRFLRHITFTVQRVMSDERMPEQ-KTLENLLKQQ 238 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 YP + + +I + + + +E+++L ++I+ Sbjct: 239 YPLCYNTSVKIVKMMQTYLNKPVYDSELVYLTMHIQ 274 >UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178876C Length = 295 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 146/276 (52%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERI--NSSGIEKEYALSSHELNG 59 + +++ NNVV+V ++ E V++G+GIGF + G I + IEK + L E Sbjct: 7 FTVVRVIGNNVVMVTGGKKESEYVILGKGIGFGAKIGGTIASDDKRIEKLFRLEDREQWS 66 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 + LL +VM D+I++L + G L D +Y++L H QF I R ++ + + NP Sbjct: 67 QAHHLLEEFDPQVMEITDQILNLIGQEFPGTLNDKVYLALPSHIQFTIYRIRKGMDIINP 126 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L + + +PKE+ + +A +I K +++P+DE+GF+ H+ SA + + + Sbjct: 127 FLEETRISFPKEYDIAAKAAELIGKTFDIEVPEDEIGFLTYHVYSAVSHVPVGHLVKASN 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ +++ I+ + + + S+ Y RL+ HL+F RIL D + ++ + Sbjct: 187 VVGSLVKYIEEERQVAFDRGSMDYVRLLMHLRFSVDRILNQEI--HVDNPFAEQIRSKFT 244 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Q + A R++ + + +K+ AE+ FLA+++ R+ Sbjct: 245 QEYGLATRLSGMMEKELGKKVPEAEVCFLAMHLYRL 280 >UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A6BJ08_9FIRM Length = 281 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 147/278 (52%), Gaps = 4/278 (1%) Query: 1 MNMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 M +I K+LN+N V+ I D +E ++MG+G+GF ++ ERI ++ Y+L ++ G Sbjct: 1 MMYRIEKVLNHNTVMAIHQDDHKEVLIMGKGVGFGRKVAERIEVRPEDRLYSLQKYKERG 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 E++ I E + + ++ A++ GK+ + L DH FA+KR Q + + NPL Sbjct: 61 GAKEIVKSIAPEFLEVTNAVLDEAEKIFGKIDRMVLFPLADHIAFAVKRIQNHEQISNPL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 DI+ L+ EF+ E ++ K+ G+ + DEVG++A+H+ SA + + + Sbjct: 121 TEDIRVLFHMEFKAAESIRPLLQKQFGIDIEDDEVGYVALHIHSAIEDEKVSQAMQMARS 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +RE + +++ SLSY RL+ H++++ R L + + + ++ +P+ Sbjct: 181 VRECISMVEEAIGKPIDIASLSYNRLMNHIRYMVARALSGEKLKVN---MNDYMEVKFPK 237 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ A+ + +G K+ E +LA++IERV + Sbjct: 238 SFGMAQAVCDQVGESLGVKLEEVETGYLAMHIERVAND 275 >UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMP9_9FIRM Length = 285 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 150/277 (54%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 +I+K+LN+N V+ I D +E +VMG+GIGF K+ ERI + Y+L + G Sbjct: 1 MYRISKVLNHNTVIGIHADDNQEYLVMGKGIGFGKKVSERIEVRDGDTVYSLQATSNRGN 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL + I + + I+ A++ + ++ + DH ++A+KR Q + + NPL Sbjct: 61 AKELATSIQPIYLEIANEILDEAEKVFQNIDRAVLFPMADHLEYAVKRIQNHEQISNPLT 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ E++ E I+ +RLG+ + +EVG+I++H+ SA N+ + + + Sbjct: 121 DDIRVLFHLEYKTAECVRPILKERLGITIDDNEVGYISLHIHSAIKDENVSLAMQIARAV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 RE + ++ + SLSY RL+ H++ + R L+H + +L ++ +PQA Sbjct: 181 RECISHVEQAVNRPIDVMSLSYNRLMNHIRNMVARALQHEELK---LNLNDYMEVKFPQA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +Q A+ I +G +S AE+ +LA++IERV E Sbjct: 238 FQMAQTICDQVGKNLCCTLSDAEVGYLAMHIERVVHE 274 >UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ73_9FIRM Length = 273 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 151/277 (54%), Gaps = 7/277 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI---EKEYALSSHELN 58 ++ K LNNN ++ + ++ RE +++G+GIGF K++GERI S K Y L + + N Sbjct: 1 MFRVIKPLNNNGLLALTEEGREVILLGKGIGFGKKSGERIESLTCLPQAKVYHLVTDDEN 60 Query: 59 GRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 L ++ + + R++ A++ + D I + + DH A++R ++ + LPNP Sbjct: 61 SALQR-VNGLDPHAVELAARVLDEARKSFPAMTDDILLPMADHIAMALERCRRGIRLPNP 119 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L DI ++P E+++ E+ L I++ G+ LP +E G++++H+ + N D + Sbjct: 120 LQHDIMVMFPDEYRIAEQGLHAIEREEGLSLPPEEAGYLSLHIHAGISEQNAGDSLTNIR 179 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L + + I+ + ++ + L Y RL++H+ ++ RI + + + V++ YP Sbjct: 180 LAADCIAKIETELGISLRRTELKYTRLISHVCYMILRIRAQEEV---PLQMDEYVRKMYP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +A+Q AE++ + + IS AE+ LAI+I+RV Sbjct: 237 RAYQLAEKLCKALEEKLCLPISSAEVTLLAIHIQRVL 273 >UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAF5_9ACTN Length = 272 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 83/269 (30%), Positives = 146/269 (54%), Gaps = 6/269 (2%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEY-----ALSSHELNGRLSELLSHIP 69 +V D E +V+GRG+ F + AG+ I+ + +EK Y RL+ LL IP Sbjct: 1 MVTSDDGSELIVIGRGLCFGRHAGDAIDEASVEKTYALQEGTSQDSRTIDRLAHLLESIP 60 Query: 70 LEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 + + I+ + + L + D I I+L DH A++R ++ + NPLL +IQ+ Y Sbjct: 61 TVNLVISEDIVQMLRRELNVDINDKILIALADHISLALERERKGISCENPLLLEIQQFYR 120 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIK 188 KE+ L AL II + +G+Q+ ++E GFI +H+V+A M + + QL+R++L ++ Sbjct: 121 KEYALAGRALQIIKEYMGIQMSEEEQGFITLHIVNATMPQRSDRLIVSVQLVRDVLAIVS 180 Query: 189 FQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIA 248 +++ + SL Y+R V HL+F + R L+ + + ++L + + YP A+ CA+ IA Sbjct: 181 KRYATTLDDTSLPYERFVRHLQFFAQRALDPTAGQINGDALFRIDETAYPCAFLCADAIA 240 Query: 249 IFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y ++ AE +LA +I + E Sbjct: 241 AHLSSTYNVVVTDAEKSYLAYHIVNLLGE 269 >UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B6FR13_9CLOT Length = 293 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 80/275 (29%), Positives = 150/275 (54%), Gaps = 4/275 (1%) Query: 1 MNMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 + +++K+LNNN V+ I+ ++ E V++G+GIGF K+ ER + Y+L G Sbjct: 16 IMYRVSKVLNNNGVIAINMEENIEYVLLGKGIGFGKKISERFEAPDGCARYSLREDTERG 75 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL I E + + I+ A+E+ G++ I L DH FA++R + + NPL Sbjct: 76 SAKELAKSIAPEYLEIANAILVEAEEKFGRIDRRILFPLADHISFAVERIRHGEQISNPL 135 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 DI+ L+ E+Q+ + I+ +RL V++ E+G++A+H+ SA N+ + + Sbjct: 136 TEDIRALFGSEYQVASKLKEILKERLSVEIDSHEIGYVALHIHSAIEDENVSMAMQMARA 195 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +RE +++++ + SLSY RL+ H+K++ R ++ SI L ++QN+P+ Sbjct: 196 VRECVKILEQETGKQIDVRSLSYNRLMNHVKYMIIRAIKKESIK---LDLNDYMQQNHPE 252 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A++ + I + ++ E+ +LA++IERV Sbjct: 253 AFRLGRLVCQDIEKECAIRLEKMEVGYLAMHIERV 287 >UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMX4_SEBTE Length = 282 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 90/275 (32%), Positives = 153/275 (55%), Gaps = 3/275 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I KILNN++V+V +D EK++MG+G+GF GE+++ IEK ++L L Sbjct: 2 IKKILNNSLVLV-NDGDEEKIIMGKGVGFSSHIGEKVDIKKIEKIFSLEKKNTLQNYERL 60 Query: 65 LSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 IP I+ A + G +++SLTDH ++++R + ++L N L+WDI Sbjct: 61 AMEIPEIYFEIAGEIVERANKEFTGIFNAQLFLSLTDHISYSVERVNKGIVLQNRLIWDI 120 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMRE 182 + Y KEF +G ALT+I +++G+QLP++E IA +LV+AQ S M + +++E Sbjct: 121 KAFYSKEFTVGLWALTLIKEKIGIQLPEEEASNIAFYLVNAQSSALKMGETILSITMLKE 180 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L +I++ + ++ L Y RLVTH++F R+LE + + + L + YP + Sbjct: 181 ILNIIQYHTNHLLNKDDLHYLRLVTHIQFFVQRVLEGKMLKNREIFLLNQYVRLYPSETK 240 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 C E+I ++ + IS E +L I+I R +E Sbjct: 241 CLEKINQYVKNCVGKDISVDEKFYLLIHIIRNVQE 275 >UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8N0_9FIRM Length = 281 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 152/278 (54%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNN V+ D+ +E +V+G+GI F+K + I+ I K + L + ++ Sbjct: 1 MLIYRILNNNAVITKDEHNKEMIVIGKGIAFKKTMYDEIDPEQIIKVFVLKDKQDRNKVE 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ IPL+ I A+E L KL D + + L DH +++ + Q+N+ PN +L Sbjct: 61 ALLADIPLDYFEIAKEIKVAAEECLACKLDDGVIVRLADHIHYSVIKSQKNISTPNLMLN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I++ YPKE+ +G +A+ ++++R L ++E GF+ H+VS++ D + ++++ Sbjct: 121 EIRQFYPKEYDIGRQAIQLVNQRFQSNLDENEAGFVTFHIVSSESQEGPVDFHEMLEVLK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD---ESLQQAVKQNYP 238 ++ I+ F L+ + Y RLVTHLKF R+L + +SL + + YP Sbjct: 181 MIITTIEDYFQLHLDTTTFDYSRLVTHLKFFIQRMLLQGRQTNQSLQGDSLYEMLVAQYP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q Q + + L Y +++ ++ M+L I++ R+ K Sbjct: 241 QINQFLNHMNARLLLDYNYELTDSDRMYLIIHLARLLK 278 >UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 Tax=Enterococcus faecalis T2 RepID=C7CXK4_ENTFA Length = 282 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 87/274 (31%), Positives = 152/274 (55%), Gaps = 8/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K LNNN+V+V D EKV+ G GIGF+KR G+ I+ S I K + ++ E Sbjct: 12 MIVVKTLNNNIVLVQDQMGNEKVLFGTGIGFKKRQGDSIDESLISKIFTPNAEEQTDHK- 70 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + + E+++ RII + L K + SL DH F+I Q+N NP+ W Sbjct: 71 --IDNFQPEILSVSARIIESGELILNQKFGTGLLFSLADHLTFSIYSIQEN---DNPIKW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++ LY KE+Q+G++AL I+ +GV L +E FIA+H V+AQ+ NM D +T+++ Sbjct: 126 EVPHLYYKEYQIGKKALEIVQNEMGVTLLPEEASFIALHFVNAQIDQPNMVDTLQITEVI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++++ ++ F + + Y R +TH+++ R D+ +++ +++ Y ++ Sbjct: 186 KKIVKSVQTIFDTILDKTTADYSRFITHIRYFIIRQKNSQESLKMDKQIRELIQERYMKS 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + C I + YQ KIS E+++L I+IER+ Sbjct: 246 YACGLIIKEMLERDYQWKISEDELVYLVIHIERI 279 >UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD06_9FIRM Length = 278 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 144/275 (52%), Gaps = 6/275 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNV + ID +E + +G+GIGF+ E + SGIE+ + + Sbjct: 1 MKVIKKINNNVALCIDQGGKELIALGKGIGFKAMPYELQDLSGIERTFYAVKTDTLP--- 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L I E+ A I+S ++RL K + DS++ L DH FAIKR + ++ ++ Sbjct: 58 -VLDEIDEELFADTGYIVSQIRQRLKKEISDSLFFVLVDHLNFAIKRARAHIYFQFSIVS 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV-TQLM 180 ++ ++Y E Q G+ A+ ++ + GV+LP DE IA+H+V + + T+++ Sbjct: 117 EVVQMYQMEMQAGQWAVDYLNDKYGVKLPSDEAAIIAIHIVGSYDDESYSRELENVTKII 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ +I+ + + + +Y R V+HL +L R + +I ++ L +Q +P Sbjct: 177 GQITDIIEDRMHIQLDRTNFNYSRFVSHLMYLLKRQRDKTAIISTNHQLFDQTRQAFPAV 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +QCA I + + IS E+++L ++I R+ Sbjct: 237 YQCALAIRKTLEENQKMIISDEELLYLMLHINRMI 271 >UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A723_ENTCA Length = 280 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 150/274 (54%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNNVV+ + + E ++MG+GIGFQ + G+ I + IEK+Y +S Sbjct: 1 MKIIKRINNNVVLSK-EDEVEVILMGKGIGFQTKPGDPIPAERIEKKYYPEDDLTVEHMS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++++ + MA I+ L ++ +G ++Y +L DH FAI R +Q ++L NP+ W Sbjct: 60 KVMTKADEKQMAVIYEIVRLFRDSVGTDFNPNVYFTLMDHILFAISRQKQEIVLTNPMHW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+++Y KE+ + +A+ +I K L ++E FI +H V+AQ+ + + T+L Sbjct: 120 EIKKIYAKEYAVSVQAVELIRKELYPDFSQEEAAFITLHFVNAQIEKSANQSAYEHTELT 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L+++K+ ++ + E S +QR VTH+++ R + + +YP+ Sbjct: 180 NNILRIVKYSMNIEFDENSSYFQRFVTHIRYYLIRQSQEKEEPVLANPMIALAFSSYPKE 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A+ I ++ Q ++ E+M+L ++I + Sbjct: 240 KETADSIKEYLFEQKGWHVNDMELMYLILHIGNL 273 >UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=A7GGX3_CLOBL Length = 275 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 81/274 (29%), Positives = 165/274 (60%), Gaps = 5/274 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N + K+LNNNV++ + ++ + +++G+GIGF + GE ++ IEK Y ++ +++ Sbjct: 3 NYTVKKVLNNNVIIA-NWREEDAILVGKGIGFNSKKGEVLSKDKIEKVYIKTTSKMSENY 61 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++L +I +++ + II+ +++ L KL + ++ISL DH FA++R ++ + + NP L Sbjct: 62 NKVLDNIDNKIVGISEEIINFSEKALNTKLNEGVHISLPDHINFALRRIEKGINIENPFL 121 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++ +YPKE+++ +AL +I++RL V LPKDE GFI +H+ + + + T+ + Sbjct: 122 EELGIIYPKEYEIAMKALNMINERLKVNLPKDEAGFICLHIRAGITKQQVSESLAYTKKI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++LI + SLSY R +THL F+ R+ E +I + L ++K+ Sbjct: 182 SKVMELISKLKGKPLDKNSLSYVRTLTHLNFMIERVKEDKTIKN---ELLDSIKEEMKSE 238 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++A+ I ++ KI EI ++A++++R+ Sbjct: 239 FSIAIKVAMLIEKLFEIKIPEDEIGYIALHLKRI 272 >UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCR8_9ACTN Length = 307 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 93/278 (33%), Positives = 151/278 (54%), Gaps = 9/278 (3%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 ++TK LNNNV V D+ E VV+G G+G+ +R G I +E+ + SS E +L + Sbjct: 32 KLTKTLNNNVAVAQDNNGCEFVVIGLGVGYVER-GAEIPQEKVERVF--SSVEQQSQLYQ 88 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L+ IP I+ AQ L +L DSIYI+LTDH + +R Q+ +L N L W+ Sbjct: 89 LVESIPQRYFDLAREIVDYAQSTLSVRLADSIYIALTDHIAYVHERAQKGLLPKNSLTWE 148 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQ---LPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQ 178 I + Y +EF++G++ + +++ L L E IA+HL++A+ + Sbjct: 149 ISQYYRREFEVGKKVVELLEDELDGTSALLGDAEAASIALHLINAEQEEAGSRQGIEELK 208 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 LM +++Q+I++Q L Y E L YQRLV H++F R+L +L + V+++YP Sbjct: 209 LMNQVMQIIRYQAHLVYSEGDLDYQRLVVHVRFFVQRVLGGERSQ-VPGALSKMVRESYP 267 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A+ AE + F+ + R I EI +L I+I R+ Sbjct: 268 EAYSVAEHVRAFVEGKLARSIGDEEITYLIIHIARLLN 305 >UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillales RepID=B7GIF9_ANOFW Length = 281 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 156/274 (56%), Gaps = 2/274 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + +I K+LNNNV++ E V++G+GIGF K+ G+ I +EK + L + + Sbjct: 4 SFRIEKVLNNNVLIASHPTYDEVVLIGKGIGFGKKKGDVIAQKDVEKWFILKNEREQEQY 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL H+ E + + II Q+R L + I+++LTDH FAIKR +Q + + NP L Sbjct: 64 KKLLPHVDEEFIGLMNDIIHHIQKRTNSSLNEHIHVALTDHILFAIKRLEQGMDIKNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LYP E+ + E + ++++RL +QLP+ E+GFIA+H+ SA + + +V +QL+ Sbjct: 124 VETKSLYPLEYDVATEVVNMLNERLRIQLPEGEIGFIALHIHSALTNHQLSEVNQHSQLI 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ +++ Q + ES+ Y R V HL++ R+ + + + + L +K+ YP Sbjct: 184 SRLVSVVEKQLDIRIDRESIHYLRFVRHLRYAIERVKKGEKMEEP-KKLSNILKETYPLC 242 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + ++ + Q + AE ++L ++++R+ Sbjct: 243 YNLSWKLIKIMQQTLQLPVDEAEAVYLTLHLQRL 276 >UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFN4_EXIS2 Length = 259 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 147/253 (58%), Gaps = 3/253 (1%) Query: 27 MGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQER 86 MG GI F K+ + ++ + IEK + S E + E+L+ PL+++ ++IIS A+ Sbjct: 1 MGPGIAFGKKKKDPVDPTKIEKMFIP-SFENAEQFKEILTTTPLDIIDLSEQIISYAEGE 59 Query: 87 LG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRL 145 L D I++SLTDH A++ ++ +++ N L +I+ LY E+Q+GE A+ I+++L Sbjct: 60 LKTPFHDYIHVSLTDHLAHAVRLAREQLVVHNRLAEEIRLLYTAEYQIGEWAVAHIEQKL 119 Query: 146 GVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 V LPK+E IA+HL +A+ NM L+ E+ + I+ F + S++Y R Sbjct: 120 AVSLPKEEAANIALHLYNARQRHPNMATALQTATLLNELREQIEAFFGQTIETTSMTYYR 179 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEI 264 TH+K + RI + +++D D + AVK Y A++CAE +A ++ + Q + +E+ Sbjct: 180 FFTHMKLVLARIEQGQTLHDMDNVILSAVKTRYTDAFRCAENMAAWLEQELQTTVPQSEV 239 Query: 265 MFLAINIERVRKE 277 ++A+++ER+R + Sbjct: 240 GYMALHVERIRPD 252 Score = 40.2 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L +++ + + + + L HL E +++ L + ++ Y Sbjct: 48 LSEQIISYAEGELKTPFHDYIH--VSLTDHLAHAVRLAREQLVVHNR---LAEEIRLLYT 102 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 +Q E I + + E +A+++ R+ H Sbjct: 103 AEYQIGEWAVAHIEQKLAVSLPKEEAANIALHLYNARQRH 142 >UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2L9_9FIRM Length = 311 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 148/276 (53%), Gaps = 3/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + + +I+NNN+V+ D + E V +G+G+GF+K+ + I+S + K Y L +L Sbjct: 26 TLLVKRIINNNIVIAEDFKGHEVVAIGKGLGFRKQKYDVIHSREVMKTYVLVDGSARPQL 85 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L +P E++ RII +AQE L ++ ++L DH QF++ +++ +P + Sbjct: 86 LSLFEQVPFEIIELTQRIIDIAQEDLKMTFNVNLVVALADHIQFSVNQYKAGFDMPALVN 145 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +++R Y E+++G++A+ +I++ L +QL ++E IA HL++A D + Q + Sbjct: 146 EEVKRFYKDEYEVGKKAVRLINETLHIQLKREESTSIAFHLITAAEKRPNHDALRIMQGV 205 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA--SINDSDESLQQAVKQNYP 238 E+++L++ L E+S++ R + HLKF IL S S+ Y Sbjct: 206 SEIIKLVEQTLDLTLDEDSMAVSRFIIHLKFFMRSILFEQVRRSEGSLGSMLSQFSTGYE 265 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 QA +C + I+ ++ Y ++ + ++L I+I R+ Sbjct: 266 QASRCVDLISNYVLEHYAYSLTDEDRLYLMIHIVRL 301 >UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH42_PEDAC Length = 283 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 153/259 (59%), Gaps = 3/259 (1%) Query: 20 QQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRI 79 + E V++GRGIGF K+ GE + I+K++ L+ + S +L+ + E + +I Sbjct: 18 DEDECVLVGRGIGFSKKPGEFVEEDRIQKKFLLADKGTMAKFSRILNEVTSEELLVTSKI 77 Query: 80 ISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEAL 138 IS+A++ L KL +SIYISLTDH + I+R+ Q L+ N LWDI+R YPKEF++ +A+ Sbjct: 78 ISMARQELKVKLSESIYISLTDHIHYVIERYHQGKLMTNTFLWDIKRYYPKEFEVALKAV 137 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 +I+K+ ++L DE G+IA H ++A G + A +T+L+ E++ ++ + Sbjct: 138 HLINKKFNIKLKDDEAGYIAFHFINATNDIGEDGNTALLTKLVHEIINIVSLNLDMVIDS 197 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQAWQCAERIAIFIGLQYQ 256 +S R +TH+KF S R+++ D ES L V+ Y ++++ ++I +F+ +YQ Sbjct: 198 SDISSYRFITHVKFFSQRLIKRMQSADETESDLFNLVRNKYEKSYKIVKKIDLFLNKEYQ 257 Query: 257 RKISPAEIMFLAINIERVR 275 +S + ++ ++I R+ Sbjct: 258 YSMSKNDQLYFMMHIHRLI 276 >UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 Tax=Enterococcus RepID=C2HEQ1_ENTFC Length = 310 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 86/278 (30%), Positives = 150/278 (53%), Gaps = 7/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI N N V+V DD +EKV +G+GIGF ++ + I IE+ + + +L Sbjct: 21 MKIKKIFNQNAVLV-DDGGQEKVAIGKGIGFDRKRNDLIFDRDIERIFVMEPEG-QIKLQ 78 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ I + + II A+ L KL + + I+LTDH F+ + +++ N LL Sbjct: 79 NLLNQIDERFLFAAETIIDHAETVLMEKLNEHVLIALTDHIAFSAENINNGIVIRNKLLR 138 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+ LY EF + + A+ + K LG+ DE G+IA+H+ S + N ++ Sbjct: 139 EIEVLYSDEFSIAQWAVEYLTKELGIPYTYDEAGYIAIHIHSGRSGRNNNHRSIREVTIV 198 Query: 181 REMLQLIKFQFSLNYQEE--SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++ L++ + + E SL+Y RLV HL+ L R D + + VK+ YP Sbjct: 199 SDIIHLVESELETDIHSEPFSLNYSRLVNHLRLLLQRTHA-QQYAVLDTEIVEMVKRKYP 257 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++++ +++I + + +YQ I+ E+ +LAI+IER+R Sbjct: 258 ESYKISKKIRVLLTKEYQLAITKEELGYLAIHIERLRS 295 >UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C005_LISGR Length = 301 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 162/279 (58%), Gaps = 6/279 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM + K +NNNV++ + +E +V G+GIGF+ + ++ + +E+ + + ++ Sbjct: 22 NMIVKKRINNNVILAE-ENAKEMIVTGKGIGFRAYPKDEVDQTKVEQLFLPTGKWDTMQI 80 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL + + + II + ++ L K+Q + +SL DH FA++R ++ + + +P+ Sbjct: 81 AALLKDTDIADIQLAEAIILIGEKLLQQKIQRTSMLSLLDHIIFALERSKEKIAMKSPIE 140 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN--MEDVAGVTQ 178 W+++ YP+E ++GE+A+ +I++ GV+LP+ E FIA+H V Q+ + M ++ + Sbjct: 141 WEVKHFYPQEMKIGEQAVELINRIKGVKLPESEQIFIALHFVHYQIDSSATMPEMMTYLE 200 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLK-FLSWRILEHASINDSDESLQQAVKQNY 237 +R++ Q+IKF+F + E+S+ +QR + HLK +L R + L + +K++Y Sbjct: 201 TIRDITQMIKFEFQMEIDEDSVYFQRFLHHLKCYLLIR-KGEEQKRFIRQPLARLIKEDY 259 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + ++CA +I ++ +Y S E ++L +++ R+ + Sbjct: 260 QREFKCARKIDCYLTEKYGVAPSSDEQVYLTLHLARLIQ 298 >UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2Y2_ERYRH Length = 282 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 87/279 (31%), Positives = 149/279 (53%), Gaps = 7/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITKI NNN V D + VV G GIGFQ + G+ I++S IEK + + S + Sbjct: 1 MHITKIFNNNCVATFID-GEDMVVTGSGIGFQHKIGDEIDASRIEKMFKVVS-DSQDDFE 58 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP++ I+ A L L D+I ++LTDH +A+ R + +V LP Sbjct: 59 QLLNKIPVDYFEATRAIVEYAHSVLDTSLSDTINVALTDHIYYAVLRSKDDVELPGLFTE 118 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ YP EF++G AL I+KR V LP+DE+G++ +H+V+A ++ Sbjct: 119 EIKMYYPDEFKVGAWALNYINKRFEVTLPQDEIGYLVIHIVNASNGNISHQAQNTMMFLK 178 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN----DSDESLQQAVKQNY 237 +++ +++ + + +Y RL THLK+L+ RI+ + S N +S L + Sbjct: 179 DVMAIVQSELGIEMNSSQPAYTRLATHLKYLAQRIIGNQSSNHPFDESIGELNLFIAAKL 238 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + C +I ++ ++ ++S E M+LAI++ ++ K Sbjct: 239 KKYNDCVAKINQYVHTRFDYELSMDERMYLAIHLYQIMK 277 >UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GB96_9ACTN Length = 283 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 140/280 (50%), Gaps = 9/280 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + LNNN V+ D RE V +G+GIG+ ++ S +E+ + E Sbjct: 1 MLAIRKLNNNAVICRDSLNREVVALGKGIGYGGDFPRELDISTVERTFYSVDAEGQ---- 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P +V+ +++ + L ++ + + + DH FAI R ++ + L + Sbjct: 57 RIMRDLPADVLIFTAKVMDIVSNELPYEVSPNAVLIMADHLAFAIARQKKGICFDMTLAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA----QMSGNMEDVAGVT 177 D+++LYP E+++G + + + +GV+LP +E+ IAM+LV+A + + + Sbjct: 117 DVRQLYPLEYKIGRYIVARLRQEMGVELPHEEIASIAMNLVNAKTGAEAEASSDRARSFE 176 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 QL+ ++ +++ F E+ Y R TH+++L RI +I+ ++ L + + Sbjct: 177 QLLNDVTAIVERDFRTIIDRETFEYSRFATHVQYLFRRIQGGENISSANLPLYGNSLEEF 236 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 P+ C + I+ I + +++ E ++L +++ R+ + Sbjct: 237 PELASCIDHISTCIERSWGTRLTDEEKLYLMLHVNRICSQ 276 >UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobacillus RepID=Q041B0_LACGA Length = 292 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 154/279 (55%), Gaps = 8/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH+ Sbjct: 13 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFTATSHQDEVNQ- 71 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL- 120 + I + +++I + + L K D Y++L DH FA+ R + ++ + Sbjct: 72 --VKEINASTIDLTNKVIQMVEPLLNVKFNDFQYLALADHIDFALSRTEDHIDMSAANTR 129 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W+++ L+PKE+++ E + +I+K + V LP E F+ H V+A + +++ +T+L Sbjct: 130 WEVKNLFPKEYKISERVIALINKEMKVNLPPSESIFMTYHFVNAASDNDQVQETVEITEL 189 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 + ++ +I++Q+ + ES +Y R +THL+ L R+L +H + D+SL +K Y Sbjct: 190 ISGIIDIIQYQYQMTLDTESFNYSRFITHLRVLLVRLLRNKHQKSGELDDSLLAFMKIKY 249 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ AERIA ++ + ++ + +L ++I RV Sbjct: 250 NHAYDTAERIATYLHSKKGWTLNSDDKFYLVLHIWRVTN 288 >UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacillaceae RepID=C6VMH3_LACPJ Length = 280 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 149/279 (53%), Gaps = 8/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVVV +D E V G+G+GFQK E + + + + ++ + Sbjct: 1 MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNY----QYY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL IP E+ I+ AQ + + L ++ SL DH FAI R P + Sbjct: 57 QLLKEIPTEIFDLSAAIVERAQALIPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS--GNMEDVAGVTQL 179 D+++LYP+E +G A+ +I++RL +QLP EV IAMH V++Q + V ++ Sbjct: 117 DVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQTNDLATNSSVNSDDEM 176 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYP 238 ++ + ++I+ ++ L + +Y R V HL++ R+ +H I+++D S L ++ + P Sbjct: 177 IKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + A+RIA ++ Q + E+ +L I ++R+ + Sbjct: 237 EIYLVAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNK 275 >UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 Tax=Lactobacillus casei group RepID=B3WDA1_LACCB Length = 276 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 151/276 (54%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K+LN NVV+ D E + G+GIG++++ + + I K++ + Sbjct: 1 MFRIKKVLNVNVVLAEQD-GHEYIAFGKGIGYRQKVNACLPDNAIFKKFMPLDDSRKSEM 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + L++IP ++ +I++ A+++L L SIY +LTDH F+++R+ L N + Sbjct: 60 IQSLNNIPPVYISITSQIVTYAEQQLQLSLLPSIYYALTDHLAFSVQRYHSKQSLGNRIY 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQL 179 W+++ YP+ F +GE LT+++ L + LP++E IA H+++A + ++ VTQL Sbjct: 120 WEMKPYYPEMFAIGEYGLTVVEATLQLALPREEAANIAFHIINATPAAAGKANILEVTQL 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +LQ ++ SL+Y+R VTH+KF + R L + D D L +V YP+ Sbjct: 180 VDNVLQAVRALTGGTIDTTSLNYERFVTHMKFFAERYLGDTMLAD-DGQLLTSVYTVYPE 238 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A + A ++ I Y+++ + E+ +L I+I RV Sbjct: 239 AAKIALKVQKAIIAIYEKEPTKEELAYLIIHIHRVL 274 >UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4R0_9FIRM Length = 275 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 155/278 (55%), Gaps = 7/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +I NNNV++ ++ E +++GRGI F G ++ IEK++ L ++ + Sbjct: 1 MIIKQIYNNNVILSENEAGDEIILVGRGIAFGMTRGSKVVEGRIEKKFELQD-DVGQKFK 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + + + II + + K + DSIY++LTDH I+R + ++ LL Sbjct: 60 TLVQDVPYKTILVSEEIIDYIKTQSTKRINDSIYVTLTDHIANMIERIKMGIVFDPTLLL 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ LY +E++LG + ++ ++L + + E FIA+H+++A++ NM+ + +T ++ Sbjct: 120 NVKSLYKEEYRLGLKVTELLRQKLKIDIDDGEASFIALHIINAELDSNMQQMYEITAVIE 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAVKQNYP 238 E+L L++ F + E+ R +TH +F + R++ + ++ D + S Q +Q +P Sbjct: 180 EILNLVREDFQI--DTENGQCDRFITHCRFFAQRVVNNEYLSTKFDYNLSTYQVFEQTHP 237 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + C ERIA I +Y +S E +++ I++ R+ + Sbjct: 238 RETACIERIAQRIKDRYGYTVSTDEKLYIMIHLIRLTE 275 >UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lactobacillus RepID=C7TEP6_LACRG Length = 290 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 9/282 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN VVV D+ R+ +V+ RGIGF + G+++ K Y H Sbjct: 1 MIIDAILNNNAVVVRRDK-RDIIVVERGIGFHAKKGDQLTLQDSMKVYVPEDHAKLKIAM 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P E + RII A+ +L K + I L DH FA+ R + ++L N LLW Sbjct: 60 ATIASLPDEYLTIAARIIQEAEVQLHTKFNSYLLIELADHIHFAVTRLHEQLILHNKLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQLM 180 +IQ Y F++GE ALT I ++G QLP+DE GFIA+ VS +S + TQ++ Sbjct: 120 EIQIAYEPAFRMGEWALTEIANQIGEQLPEDEAGFIALKFVSNDLSQQHPVNSVAFTQML 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS------DESLQQAVK 234 + ++I +Q LN ++ YQRLV HLKF R+ ++ D++L ++ Sbjct: 180 ANITKIIFYQLGLNMNAKTPEYQRLVIHLKFFLQRVYATSTAKTPVSPEPYDQALLAHLQ 239 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q+Y QA++C E + F+ + IS E ++L ++I R+ K Sbjct: 240 QDYTQAYRCMEDVVKFMQQKLPGPISKNEQIYLTLHIARLAK 281 >UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX2_9CLOT Length = 281 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 152/279 (54%), Gaps = 11/279 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ LNNN + ID + +E + +G+GIGF K E + + I + + ++++ + Sbjct: 1 MQVINKLNNNFAICIDGEGKELIAVGKGIGFPKTPYEVEDLNLITRTF----YDIDPKYI 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL IP +V+ +++ +A+ LG ++ ++ ++++DH F+I+R Q+N+ + PL++ Sbjct: 57 ELFKDIPEKVVHFTAKLVEIAKNELGYEMNPNLVVTMSDHIHFSIQRAQKNIDVQMPLIY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED------VAG 175 ++++ +P E ++G+ A+ I++R V+L +E IAM+ V+A+ ++ Sbjct: 117 EVEQTFPAEARIGKYAVKQIERRFNVRLDPNEASGIAMNFVNARYDTRLKTDVADQLKKQ 176 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +++ + + +++ + + +S ++ R +HL +L RI + + + + Q++K Sbjct: 177 YQEILEDTISIVEDEIGIVIDRDSFNFARYSSHLMYLLDRIAGNKMLYSDNGIMYQSMKD 236 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +P C E + + + +S E ++L ++I R+ Sbjct: 237 EFPGIAVCVELLERYFKRKCGIILSKEEKLYLILHINRI 275 >UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MNU4_9FIRM Length = 275 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 165/276 (59%), Gaps = 7/276 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ KILN+NVV+ D+ QR + G GIGF K++G+ ++ + I Y L + R Sbjct: 1 MLKVEKILNHNVVLCRDESQRNLIAFGTGIGFNKKSGDSLDEARIVNLYGLKN---LARY 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L+S ++++ ++II +E + +I++SL DH QF++KR+++N+++ N L Sbjct: 58 EKLISETEDQIVSLSEQIIRELEECFSQDFDRNIHVSLLDHLQFSVKRYRENMIVQNVFL 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + YPKEF ++AL ++++ L + LP E GF+ MH+ +A ++ Q+M Sbjct: 118 DETAYFYPKEFAFAKQALAMVNESLKINLPLSEAGFLCMHIHAALHHEDLSFTNFSFQVM 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L LI+ ++ ++ + QRL+TH++F R LEH+ I + LQ+ +++ Y +A Sbjct: 178 QDILGLIETDLGIDLKQYEDARQRLMTHIRFAIKRSLEHSEIQND---LQEVIQERYVRA 234 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A++I+ + +Y ++ AE+ +L+I++E + + Sbjct: 235 FALAKKISTVVQEKYDLSLNEAELAYLSIHLENIIR 270 >UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAU5_9FIRM Length = 273 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 145/274 (52%), Gaps = 6/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K L NN + D+ RE + +G GIGF K + S I++ + E Sbjct: 1 MEVIKKLGNNAAICKDNSGRELIAIGLGIGFPKCPYILEDLSKIDRTFYNVDKE----YL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +I E+ + +I LA L L+ + +L DH FAI+R + ++ P+ Sbjct: 57 NLFEYIDSEIFSIAADVIDLATTMLSVPLKHNAQYTLADHLNFAIERMDKGMIFSTPISN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQLM 180 +++ LYP E ++ + L ++ KR + LP++E+ IAM++++++ + + +V ++ + Sbjct: 117 ELRDLYPVEVKIAKYTLGLMKKRRNIDLPEEEMYAIAMNIINSEENITVSGNVKLKSEFI 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 RE++ +I+ Q +++ S +Y R +H+++L R E I+ +++ L + +K Y + Sbjct: 177 REVVHVIEAQMNVSIDMHSFNYSRFASHMQYLFRRKNECTEISSANKKLFEVLKNEYTET 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +QC I I ++ I EI++L +++ R+ Sbjct: 237 YQCVLLIKKLIFDKFNWNIGDEEILYLILHVNRL 270 >UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactobacillus rhamnosus RepID=C7TG18_LACRL Length = 288 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 146/280 (52%), Gaps = 5/280 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNN V+V +E ++ G+GIGF KR G+ ++ + L+ ++ Sbjct: 1 MLKVKQVYNNNAVLVDVGNGKEAILQGKGIGFSKRKGDDVDPKASSEILYLNDTQVKNHF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL +P++++ +I +A+++ + + IY++LTDH KR +P Sbjct: 61 TSLLKDVPIDIVVATFGVIGMAKKKYHYPVLNYIYVTLTDHVFQMYKRLTAGKYQASP-A 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 DI+ YP +Q+ +A ++ LGVQ P+ E+ IA+H ++A+ + G ++ +T Sbjct: 120 PDIRDRYPLPYQIAADARRQLNHDLGVQFPEAEIKNIALHFINAKGVDGELDPTVTLTAR 179 Query: 180 MREMLQLIKFQFSLNYQEESLSY-QRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNY 237 + ++ + ++ LN + +Y RL+ HL++L R+ + D + Q ++ Y Sbjct: 180 VNAIVTQVFAKYGLNRNFANQNYFDRLMIHLQYLVERLNTNEQDEADLGPEIGQDFRRLY 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 P+++ A I + Q K++ E ++ I+I+R+ +E Sbjct: 240 PKSFTIATEICTELEKALQIKLNENEHVYFIIHIQRLIQE 279 >UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2DZ21_9LACO Length = 277 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 152/277 (54%), Gaps = 8/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V D+ E +V+G+GIGF K+AG+ I S IE+ + + + + Sbjct: 1 MIFEKSYNNSAALVKDEAGVEWIVIGKGIGFGKKAGDIIEESKIERRFKNTDQDTTLKT- 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL- 120 ++ + ++ ++++ L+Q ++G K + Y SL DH F + R ++N++L N ++ Sbjct: 60 --VTSLSSLALSLTNKMVELSQIKIGIKFDNYAYTSLADHVDFMLTRNKENMILDNQMMQ 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W++ +LYPKE + E + +++K V LP+ EV F+ HLV+ +++ +++L Sbjct: 118 WEVVKLYPKEVAVARELVAMVEKEAKVTLPESEVVFLTYHLVNVGFDKETVQETMELSKL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNY 237 + +L+++ + + S +Y R VTHL+ L +I++ + D Q +KQ Y Sbjct: 178 LDGILRIVSLETGKSLDRTSFNYSRFVTHLRALLIQIIKKQDRKNDGLDPVFGQLMKQKY 237 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ + E+IA FI + ++ + ++L +++ RV Sbjct: 238 PETSKVVEKIAYFIKEKTGYQLGEDDEVYLILHVWRV 274 >UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=C9XMN6_CLODC Length = 271 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 94/274 (34%), Positives = 158/274 (57%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KI NNN + + + ++E +++G GIGF KR G+++N IEK Y + H + + Sbjct: 1 MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDH-MQTKFL 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ELL ++ EVM +IISL GK + +SL +H FAI R + NV LPN +L D Sbjct: 60 ELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLD 119 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ +Y KEF+LG +AL II + + LP+DE G+IA+H V+ Q + N+ + ++ Sbjct: 120 IKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVNLQSNDNL--AYDTLKFVKG 177 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQAW 241 + LIK + L E SLS R THLKFL+ RI ++ D + + N+P+ Sbjct: 178 SIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNK 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + E++ ++I +++ K+ E ++L +++ ++ Sbjct: 238 EYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL 271 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 55/136 (40%), Gaps = 5/136 (3%) Query: 142 DKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT-QLMREMLQLIKFQFSLNYQEESL 200 +KR G ++ +D++ I ++ + +E + V+ ++M Q+I + + Sbjct: 32 NKRPGDKVNEDKIEKI-YYVQDHMQTKFLELLKNVSPEVMDASQQIISLIPGNEGKFNNK 90 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKIS 260 LV H+ F R+ + + + + +K Y + ++ + I + Sbjct: 91 GILSLVEHISFAIDRMKNNVFLPNL---MLLDIKMMYSKEFELGVKALEIIYRVCHIHLP 147 Query: 261 PAEIMFLAINIERVRK 276 E ++A++ ++ Sbjct: 148 EDEAGYIALHFVNLQS 163 >UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria RepID=C3RIJ4_9MOLU Length = 281 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 158/276 (57%), Gaps = 5/276 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + ++I K+ NNN V I D+ + ++ G GIGFQKR G+ ++ S IEK Y + R Sbjct: 4 ITLKILKVFNNNSVAAISDELGDIILTGSGIGFQKRIGDEVDESRIEKTYFFKD-DQQKR 62 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 + + +P ++I++ A + L I+++++DH FA+KR ++ + LPN + Sbjct: 63 FEQSIETVPAIYFEITNKIVNQANKELDTDFSGEIFLAISDHISFAVKRKKEEIYLPNVV 122 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L + + LY KE+++G AL I+++ G++L DE G+IA+HLV+ + + + L Sbjct: 123 LSETKVLYKKEYKVGLWALDYIEEKTGIRLDDDEAGYIALHLVNFSLDNKANNATKIVTL 182 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA--SINDSDESLQQAVKQNY 237 +E+L +IK ++ +E+SL Y R+ THLK+L+ RI + D+ +++ +K++ Sbjct: 183 TKEVLNVIKLSMKVDLEEDSLGYARISTHLKYLAERIFRDEIDELQDTTADIREMLKEDL 242 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 + C RI I +Y ++SP E +L I+I++ Sbjct: 243 RLSL-CINRIVKLIRDRYDYELSPDEQTYLCIHIKK 277 >UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Streptococcus RepID=B9WWD1_STRSU Length = 245 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 142/236 (60%), Gaps = 2/236 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+ NNNV+ ID Q RE +VMG+G+GFQK+AGE +++S IEK + L + LS Sbjct: 1 MQIEKVYNNNVIQAIDQQGRELIVMGKGLGFQKKAGEELDTSKIEKTFVLQNDYQQSDLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + + + II+ A+E L D S+Y++L DH F +R ++ + + NPL W Sbjct: 61 SLYLQMESGEVEVVNAIINRAEETLEVQFDLSLYLALADHLHFVFQRCREGIFIENPLSW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 ++++ YPKE+Q+G EAL ++ +RLG++L K E IA+HLV+AQ +G ++ +++++ Sbjct: 121 EVRKFYPKEYQIGLEALQLVQERLGLELGKGEASSIALHLVNAQKNGAFGKETQTISKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 ++L +++ F EE SY R VTH+++ + R+ L+ K + Sbjct: 181 TQILDIVRLHFGSVTYEEDTSYHRFVTHIQYFAQRVANGVVEGQLSRFLRLYNKNS 236 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 ++ +G +++ ++ + + + Y L HL F+ R E I + L Sbjct: 64 LQMESGEVEVVNAIINRAEETLEVQFDLS--LYLALADHLHFVFQRCREGIFIEN---PL 118 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 V++ YP+ +Q + + ++ E +A+++ +K Sbjct: 119 SWEVRKFYPKEYQIGLEALQLVQERLGLELGKGEASSIALHLVNAQK 165 >UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLN3_CLOCL Length = 280 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 149/276 (53%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGR 60 + K NNNV++ D D+ +E V++GRGIGF G+ + IE+ Y + E + Sbjct: 4 FTVIKPFNNNVILGFDRDKDKECVMVGRGIGFSVVKGQEFYDREKIERIYYIEDDENKAK 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQE-RLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ L ++ ++ + IS + L I+I+L DH F I+R + + + NP Sbjct: 64 LNSLYRNVDSSLIGATEEAISYISKVTESDLGKIIHITLLDHLAFTIERIKNGIKIGNPF 123 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L++ + LY KEF + E+ L II+ R+ ++LPK EVGFIAMH+ +A + VA + Sbjct: 124 LYETKVLYEKEFSIAEDVLEIINDRMNLELPKAEVGFIAMHIHAALNNQKSSSVATNAYI 183 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++EM+ +I+ ++ ES+SY RL+THL+F RI + I + L ++K Sbjct: 184 IQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENI---LLDSIKTQLKD 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ A +A ++ + + EI ++A++I ++ Sbjct: 241 SYMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIK 276 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 74 ATCDRIISLAQERLGKLQDS---IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 +I++ + L L D Y+ L H +FAI R + + + N LL I+ Sbjct: 182 YIIQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENILLDSIKTQLKDS 241 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 + + + + + +P++E+G+IA+H+ + ++ Sbjct: 242 YMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIKLRQK 280 >UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT65_9CLOT Length = 281 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 150/277 (54%), Gaps = 7/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERIN-SSGIEKEYALSSHELNGRL 61 I K LNNN++ + D + EK+ +GRGIGF K+ GE +S ++K + + + Sbjct: 5 YVIEKALNNNILQIRD-GETEKLFIGRGIGFGKKPGELFEKNSVVDKVFVIEDDKNQNNF 63 Query: 62 SELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ E + C+ +I L A+ +L ++I+ISL DH ++R + + NP L Sbjct: 64 KQIFRGDGPEFVDFCEELILLIARSFHEELHETIHISLIDHISCTLRRLKLGEQIVNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LY +EFQ+ E I++R V +P+ EVGFIA+H+ SA+ +G +++ ++ Sbjct: 124 SEIEALYDQEFQIAGEVCRRIEERYDVSMPEGEVGFIALHIHSARYNGELKNALRSNRIC 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ L++ + ++S+ R + HL+++ R++ I + L + Y + Sbjct: 184 NRVITLLENEIGRRLDKKSIDCVRFMVHLRYVIERMVRQEKIEN---ELTDVIIFKYKDS 240 Query: 241 WQCAERIAIFIGLQYQRK-ISPAEIMFLAINIERVRK 276 ++ +I + + + + K IS E+ +L +++ER+RK Sbjct: 241 YELVLKIKVLLERELKTKNISREELAYLTMHVERLRK 277 >UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacteria RepID=C3RPC3_9MOLU Length = 289 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 141/278 (50%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN+ + +D + E +V +GIG+ E + S IE+ + ++++ R Sbjct: 1 MKVIKKINNNIAIAVDGENNEVIVFAKGIGYGNIPYEIKDLSVIERTF----YDVDNRYY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP + +++ +A++ + +L ++ L DH FAI R + + + P + Sbjct: 57 GLLKEIPNNIFNLVTKMVDVAKKNIEDELSPNLVFILADHINFAIIREKNGMDISLPYSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV----- 176 +++ YP ++ + + ++ L LPK EV I MH ++A N + AG Sbjct: 117 ELEYEYPLLTKISKWMVKKTNEELDTHLPKGEVTSITMHFINALEGTNTKMHAGNIENKI 176 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 ++++ + +++ F+ N ++S +Y R HLK+ R D++ L +++ + Sbjct: 177 SKVIFNVTNIVEKHFNFNIDKKSFNYFRFKNHLKYFVQRKEAREMFTDNNRELYESMIEK 236 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 YP + C +I + +Y+ K + E+++L +++ R+ Sbjct: 237 YPDTYDCISKIDNYFYQEYKEKCTTEELLYLLVHVNRL 274 >UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS0_9FIRM Length = 284 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 156/284 (54%), Gaps = 9/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN V+ IDD ++E V++ GIGF + G + S +EK + L ++ + Sbjct: 1 MTIKTILNNNAVIAIDDNEKEVVIVKNGIGFNSKKGMVLKDSDMEKVFILQEKNVSDDMI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS I E + +I+ + L + DSIY++L+DH + A+ R ++ + N + W Sbjct: 61 HLLSLISEEYIEVSKKIVDYGRTVLKTGVHDSIYVTLSDHIELAVSRKKKGIAFDNAMTW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-- 179 I++ Y +E+ +GE AL II GV LP++E G IA+H V+A++ E + Sbjct: 121 SIKKTYREEYHIGEVALKIIQIECGVTLPEEEAGLIALHFVNAKIHNEPEVTHDFAYISV 180 Query: 180 -MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVK 234 +++++ IK+ E SL Y +L+++L+ L+ + + + S +S + Q K Sbjct: 181 FVQDLINFIKYFLCTEMDENSLEYNQLLSYLQTLALVLDDRKAAEGSSDSRYHEMLQYAK 240 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER-VRKE 277 ++ +A+ C++RI F +Y +I P +I+ L + I + ++KE Sbjct: 241 VSFKRAYDCSDRIRRFTKEKYDLEIQPEDILHLTMYINKFIKKE 284 >UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bacteria RepID=A6LRF6_CLOB8 Length = 278 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 160/277 (57%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 ++ K LN+N V+ I+ D +E +++G+GIGF K+ ERI + Y L G Sbjct: 1 MFRVIKALNHNGVLAINMDNYKEYILLGKGIGFGKKVNERIEAPENAHIYLLQQETERGL 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 E++++I +++ + II A+++ ++ ++I L DH FA+KR + N + NPL Sbjct: 61 TKEIINNIEPQILEIANNIIMEAEKKFHEVDENILCPLADHIAFAVKRIRDNEQISNPLT 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+P+E+++ + II + G+++ +DE+G+IA+H+ S+ + + V L+ Sbjct: 121 QDIKALFPEEYEVACKGKDIIKEIEGIEINEDEIGYIALHIHSSLGNEKVSQAMQVAMLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R + I+ ESLSY RL+ H+K+++ R+L+ +I + + + +P++ Sbjct: 181 RSCITSIEESTGKTIDIESLSYNRLMNHIKYMAARMLKGETIK---LDMNDYISERFPKS 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ AE I + +G + ++KI EI +LA++IERV + Sbjct: 238 FEIAEDICMKLGKELKKKIKSVEIGYLAMHIERVFSD 274 >UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368A3 Length = 278 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 141/251 (56%), Gaps = 6/251 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVV+ +D RE V GRGIGF E + S I++ Y + +N Sbjct: 1 MKVIKKINNNVVICLDHNNRELVAFGRGIGFPAAPYELDDLSKIDRTY----YGVNSSYM 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ IP EV +I+ +A + +L ++ +L DH FAI+R Q+N+ L NP L+ Sbjct: 57 GLVNEIPEEVFEVAAKIVDMAVNYIDCELSSNLVFTLADHINFAIERNQRNMNLRNPFLY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT-QLM 180 DI+ Y KE +G A+ +I + L V LP++E G IA+H ++A+ E+ V+ ++ Sbjct: 117 DIRYFYEKEMDIGNLAVKMIRRYLKVSLPEEEAGNIALHFINAEALSEKENEFNVSDTVV 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E+ LI+ + ++ + E +Y R V+HL++L R +SI+ + L +K+ +P Sbjct: 177 EEVTYLIEKELNIRIKREDFNYSRFVSHLQYLMKRKDAVSSISSDNIKLYMEMKEEFPVI 236 Query: 241 WQCAERIAIFI 251 +QC +I ++ Sbjct: 237 YQCVLKIRDYM 247 >UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y550_9FIRM Length = 278 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 144/273 (52%), Gaps = 7/273 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN + D + + +V GRG+GFQK E + S I + Y + N Sbjct: 1 MKLLKKINNNFALAEDSKGEQVIVEGRGVGFQKMPCELNDLSSISRTY----YGFNSETI 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + +++ D++ + A +++ +L ++ +L DH +F I+R +N+ L PL + Sbjct: 57 RLIQTVNPQILQIADQLYNEAVDQIPAELNPNLPFTLADHLEFCIERLNKNIELKMPLTY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YP E +L E AL I+++LG+ LP E IA+++++++++ + +L+ Sbjct: 117 ELESSYPLEMKLAENALERIEEQLGICLPASEKAGIALNIINSELTVKASNTQKEEELIA 176 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++I+ S +Y R TH+++L RI E S + SL Q +++ Y + Sbjct: 177 GCTRIIEAHLHQTIHLNSFNYVRFATHMRYLLRRINEGVS-ENCSYSLYQTMQKQYAKIA 235 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+++ + +S E +L ++++R+ Sbjct: 236 GIVNGMAVYLEVN-GYPVSEEEKFYLILHVQRL 267 >UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB93_RUMHA Length = 272 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 5 ITKILNNNVVVVI-DDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 I KILNNN ++ + E++++G+GIGF ++AG+ Y E Sbjct: 4 ILKILNNNALLAKVKEDDSERILLGKGIGFGRKAGDEFTEIPGASVYTPVVREERNSTMN 63 Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 +++ I + +II A++ ++ I + L DH FA KR Q+ + L NP + DI Sbjct: 64 VVNTIDPVYIEAAGKIIEAAEQVFDTIKRDILLPLADHIAFAAKREQEKIFLSNPFVPDI 123 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + L+ KE+ + ++ II+K G ++ DE GFIA+H+ S + D TQ++ + Sbjct: 124 KILFGKEYAVALKSREIIEKMTGYRISDDEAGFIALHIHSGLSDEQVSDTLKTTQIIDDC 183 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 + +I+ +++S +Y RL++HL ++ R ++ + L ++ YP+A Q Sbjct: 184 ILMIEECLGDKIRQDSCAYIRLMSHLYYMVVRAKTGEAV---NIELNDFIRCKYPKAGQI 240 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +E I +I + ++K+ E+ FLAI+I+R+ Sbjct: 241 SEVICHYIEKKLEKKLDKEEVGFLAIHIQRIM 272 >UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP25_9FIRM Length = 239 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 137/247 (55%), Gaps = 12/247 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K NV + D + RE +V G+GIGF E + S +++ + ++++ + Sbjct: 1 MKVIK----NVALAQDAKGREMIVFGKGIGFPATPYELADLSAVQRTF----YDVDEKYF 52 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P EV D I A++ L L ++ L DH FAI+R ++ V L PL + Sbjct: 53 DLLRDVPQEVFLAADDIAENARDELNCPLNPNLTYVLADHLNFAIQRCREGVALQTPLAY 112 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 DI+ LYP+E++L AL + ++L V LP++E IA+H+++A+ G+M T+++ Sbjct: 113 DIRHLYPQEYELAHTALKALREQLQVDLPENEAISIALHIITAEAEVGDMHATMLTTKVI 172 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQQAVKQNYP 238 E+ L++ + ++S SY R H+++L R++E ++N D +++ + + + YP Sbjct: 173 SEISDLVEEHLQIRLDKDSFSYSRFAMHMRYLVQRMMEGKALNGDDGMQAMLRTMHREYP 232 Query: 239 QAWQCAE 245 + C E Sbjct: 233 DVYACVE 239 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ + + + + L+Y L HL F R E ++ L ++ YPQ + Sbjct: 68 DIAENARDELNCPLNPN-LTYV-LADHLNFAIQRCREGVALQT---PLAYDIRHLYPQEY 122 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + A + Q Q + E + +A++I Sbjct: 123 ELAHTALKALREQLQVDLPENEAISIALHI 152 >UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9B2H8_ENTCA Length = 280 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 148/276 (53%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K+LN NV++V D ++ + G+GIG++++ G+ I+ I K Y L Sbjct: 1 MYLIKKVLNVNVIIVEKDN-KDVIAFGKGIGYRQKKGQLISEEKISKFYLPIEDNRMESL 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++++P++ + +I A++ L +L + SLTDH F ++R + NV++ + + Sbjct: 60 ITFMNNVPVKYIELAYEVIQEAEKYLDTELSANTLFSLTDHIYFTVERIRDNVIMTSSMY 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQL 179 W+ +R YP+EFQ ++ + II+K LG+ L + E I H+++ + + +T++ Sbjct: 120 WEFKRFYPEEFQAAQKGVAIIEKALGISLNEQEAANITFHIINGNSRSAIHANAIQITKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +L+ ++ SL Y+RLVTH KF + R L + +N+ D L + V Y + Sbjct: 180 VTNILKSVQMLVKKKLDSHSLHYERLVTHAKFFAERYLTNTMLNN-DAVLIKTVSTLYQE 238 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++RI + Y++ I+ EI +LAI+I R+ Sbjct: 239 PMAYSQRIKRTLEEIYEKPITEEEIAYLAIHINRLL 274 >UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y980_9FIRM Length = 274 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 139/276 (50%), Gaps = 6/276 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M+I + +NNN + + VV GRGIGF + S +EK Y+ + Sbjct: 1 MKMKIIRKINNNYALARKEDGEVVVVAGRGIGFGAIPRYVTDKSQVEKIYSGVDRNTIEQ 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 + +P ++ ++I++ A++ L K + +L DH +F I+R QN++ Sbjct: 61 ----MGEMPENILKLSEQIVAYAKKHLTKKFSKNFVFTLADHIEFTIERVGQNMIFDFKG 116 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQ 178 D + LYP+E ++ A+ I++ L ++LP E+G M++V++++ ++ + Sbjct: 117 YTDFKYLYPREVEISNYAMKKIEEELHIKLPPSELGGFVMNIVNSEVKPAGNDEDVNFSP 176 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L+ ++ +I+ F L +S +Y R TH+ +L R+ E D + + + + YP Sbjct: 177 LISQITAIIEKHFKLEINRDSFNYSRFATHMIYLLRRLKEGQKTTDDNRRIYAKLLEEYP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +QC + IA F+ Q K+ E+++L +++ R+ Sbjct: 237 DTYQCVDEIARFLEENIQSKLDENEMLYLILHVNRL 272 >UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphylococcus RepID=GLCT_STACT Length = 287 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 145/280 (51%), Gaps = 4/280 (1%) Query: 2 NMQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSS-GIEKEYALSSHELNG 59 N I K LNNNV++ D+ E V++G+GIGF K+ G ++ S I+K Y L + Sbjct: 3 NYVIEKTLNNNVIICTDENQHHEVVLIGKGIGFNKKKGMELSDSVMIDKVYKLEQKKDQD 62 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNP 118 L+ V+ T + + + D + ++LTDH FA KR +Q+ + NP Sbjct: 63 HYKALVEIADDNVLQTIIEAMDIITHADRTVVDKDLMVALTDHILFAYKRIKQHQFIKNP 122 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L + ++LY + +Q+ + ++K L ++ P+DE+GFIA+H+ S++ ++ +V + Sbjct: 123 FLIETKQLYSESYQIAVSVIEHLNKLLDIEFPEDEIGFIALHIASSKDDLSLHEVRLTNE 182 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ + + +++ S+ YQR + H++FL R+ + I ++ +K +YP Sbjct: 183 IINKSILIMEHDLKYKIDTNSIQYQRFIRHIQFLIRRLQKGEIIQ-VNDEFGNMLKAHYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + A +I + ++ AE+++L ++I +++ Sbjct: 242 LCYNIAVKIIKMMQQHLDVEVYEAELIYLTLHINHFTQQN 281 >UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-binding protein n=12 Tax=Enterococcus RepID=C9BK18_ENTFC Length = 291 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 152/276 (55%), Gaps = 4/276 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + + + K LN+N V+ IDD EK+ MG+GIGF + + + +K + L S E R Sbjct: 17 LTVYVMKKLNHNAVL-IDDDGIEKIAMGKGIGFSAKVSKPFDVEDADKLFVLDSKEKIKR 75 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 SE++S IP+E M + +I L R+ L +IYI+LTDH FAI+R +++ + + Sbjct: 76 FSEIVSQIPIEFMDFAEEVIELITARISSPLDSNIYITLTDHIYFAIQRKREDRDVTAIM 135 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQ 178 L +++ LYP E+ + E + I+ R +L +EVGFI MH+++A++ N + + Sbjct: 136 LPEMRFLYPNEYDIAVEVVERINHRYQTELGSNEVGFITMHIINAELGEPNSLKSLKIVE 195 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + +L ++ +S Y +ESL+Y RL+ H+KFL R++ + + Sbjct: 196 MTTTILSHLEKSYSNVYDKESLTYHRLMVHIKFLVKRLIYQEETPVENIGFFTETF-KHS 254 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+ A +I I Q+Q I EI++LAI++ R+ Sbjct: 255 KAYCTALKIKDIIEQQFQLAIQENEIIYLAIHLARI 290 >UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria RepID=C3RKG1_9MOLU Length = 276 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K+LNNN ++ D +E + +G+GIGF K+ + K+Y + + E RL Sbjct: 1 MYRIEKVLNNNSILASKDN-QEVIFLGKGIGFGKKINDIYIPGDGVKKYKMETKEQEKRL 59 Query: 62 -SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 E++ ++ + II AQE+ + I + L DH FAIKR Q+NV + NP Sbjct: 60 PHEIIRNVDPVFIEIASDIIRFAQEQFDHVDTKILLPLADHIDFAIKRIQENVNMSNPFT 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+P+E+++ + +I+ G ++ +DEVG+I +H+ SA + ++ + +++ Sbjct: 120 KDIELLFPEEYKVALKGKQLINSITGFEITEDEVGYITLHVHSAISTDHVGESMQAMEII 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E + ++ + ++ S+SY RL+ H+K+L R+ + + ++ +P A Sbjct: 180 HESIDKLRKELNIGIDRNSISYIRLMNHIKYLLLRLNTEEKLQ---MDISDFTQERFPFA 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ ++ I I + +++I +EI +LA+++ER+ Sbjct: 237 YERSKEICIRLSKVMKKEIPQSEIGYLALHLERILS 272 >UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR4_9ACTN Length = 295 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 10/277 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ + +NNNV + +D E V MG+GIGF K + + S + Y RL Sbjct: 13 MQAIRSINNNVAICVDAGGNECVAMGKGIGFGKMPRD-VALSEVTHTYYSVD----PRLL 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E + IP +V+ R + L L ++ L DH FAIKR ++++ + PL + Sbjct: 68 EGIKEIPQDVLLFAARAAEHVRAELSYALSPNMAFLLADHIAFAIKRAREHLQVRMPLAY 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ--- 178 D++ YP+E+++G + I K V L DE IAM+LV++++ E A +Q Sbjct: 128 DVEHNYPEEYRVGLRLVRQIRKEFLVDLGDDEAAGIAMNLVNSRLESVSEQDAARSQSDD 187 Query: 179 -LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++ E+ ++++ +F L S ++ R THL +L R+ + S + + ++ Sbjct: 188 IMLEEITEIVEEEFGLRVDRASFAFSRYATHLHYLFARLHRGEVLRTEAISGLEGLFDHF 247 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ C ERIA I + + E +FL ++I R+ Sbjct: 248 PEGVACVERIADHIMDAWGVTLDADEKLFLVLHISRI 284 >UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium RepID=A0Q2H7_CLONN Length = 279 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 143/275 (52%), Gaps = 6/275 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLS 62 +I K+LNNNV++V D + + +++G+GIGF K++GE I + SGIE ++ Sbjct: 5 RIIKVLNNNVILV-DSECIQYILVGKGIGFGKKSGEIIKDFSGIESKFISLQGLDINASL 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + +++ ++ I+ + E + L +++++L DH QF +KR + ++L NP L Sbjct: 64 QFTNNLDPKIAELTKDILKIISEEFSRPLNPNVHVNLIDHIQFTVKRLKSGMILENPFLT 123 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LYPKE+ + E+A+ I+ K L + P E+GFI +H+ + +D QL+ Sbjct: 124 ETKLLYPKEYAVAEKAVEILSKGLNMHFPDAEIGFITLHICGGLNEKSKKDALENAQLIN 183 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L + + ++ S Y+ V HL+ + RI + + ++ L +K+ + Sbjct: 184 TILNFVSKKLNITLDPHSFEYKGFVNHLRGVLNRIKNNKILKNN---LLTELKKRNIIEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A ++ I Q + EI ++ I+I ++ Sbjct: 241 KIAYDVSKIIENVLQISVPEDEIGYITIHIMKLNS 275 >UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFW3_9FIRM Length = 293 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K++NNN+V+V D RE + +G+G+GF+K + + I K Y + N L+ Sbjct: 9 YRTFKVVNNNIVIVKDSNGREMIAIGKGLGFKKSKNDIVYPEEIMKTYIYLDRQKNLNLT 68 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +P EV+ II A + L K ++ +SL+DH F++K+F++ Sbjct: 69 -LFEEVPFEVIEVSQHIIDYAAKTLNQKYNVNLLVSLSDHIDFSVKQFREGNNTSKLFNE 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y E+Q+G+ A+ I++ L V LPKDE IA HL+ A + + + + Sbjct: 128 EIKRFYEDEYQVGKCAIQYINETLHVDLPKDEATSIAFHLIVASQEKTNIETRELLEGVN 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--LQQAVKQNYPQ 239 ++ + E+SL+Y R + HLKF RI+ H + N S E + + Y Sbjct: 188 SIVNITMKYLGNQIDEDSLAYSRYIIHLKFFLSRIVSHQTSNGSIEVTNIFGQLVTKYEG 247 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C I+ FI ++ + + + ++L I+I R+ + Sbjct: 248 VDRCIHEISEFINGKFNYRCTDEDCIYLMIHIVRLYE 284 >UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acnes RepID=D1YA29_PROAC Length = 303 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 143/278 (51%), Gaps = 3/278 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ + KI NNNV++ ++ E VV RGI + + GE +++S ++ A ++ + Sbjct: 21 HVIVKKIYNNNVLLGVNGSGTEMVVNARGIAYGRHRGEIVDASSAQRYVAEGAYRTTA-I 79 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL++ + I+ LA+E LG + + + DH A+ R +Q ++ PL Sbjct: 80 ASLLTNATHTEVRVAQAIVELAREELGTPHARRMMLPILDHLVAAVHRAKQGAVIDFPLE 139 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W++++LYP E +LG A+ I+D LG+ L +E ++H ++ + ++ +TQ Sbjct: 140 WEVRQLYPDEAELGRRAVEIVDGALGIHLQPEEWVAFSLHFINQRWDSRDVSRTMSMTQT 199 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ ++ + + S+S R VTHL++L R ++ ++ D + + YP+ Sbjct: 200 ICDVFTELEDLWHVEIDRSSMSASRFVTHLRYLFARASDNKQLSHVDLDIVGLMSDRYPE 259 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A A ++A + ++ AEI ++A++ R+ E Sbjct: 260 ATLAASQVAEHMSKVIGNDLTKAEINYIALHTTRLYNE 297 >UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2E1U8_9LACO Length = 292 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 149/284 (52%), Gaps = 9/284 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M ++ ++LNNNV + + + V+MG+G+ FQK+ G+ I +S ++K + L E Sbjct: 1 MTFRLVQVLNNNVGLACKEDDSQVVIMGKGLTFQKKKGDIIKASAVQKVFKLH-EESPSD 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+ IPL+ + +I AQE+ ++ IY SLT H + KR L+ Sbjct: 60 LTSLLATIPLDFLTVSYSLIDEAQEKYDYSVEPYIYASLTTHLYESAKRLADGRLVET-Y 118 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L D+++ YP +++ L RL ++ PK E +A+H ++A+ + ++ A ++ Sbjct: 119 LPDLEKDYPLPYEIAGYVLDGFATRLNIKFPKQEQKSVALHFLNARTDIHTQNQAQRRKV 178 Query: 180 --MREMLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +++L +++ + + ++ + Y+RL+ HLK+ RI + + ++ Q V Sbjct: 179 DKNKQILAIVENELNNHQIYRNRDNANDYERLLVHLKYFINRINQKPAPQVLSAAIFQEV 238 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++YP+ + ++I I + + + E ++L I+I R+ ++ Sbjct: 239 VKDYPRTFAIVQKINDQIKQKMGLEFTNDEQVYLTIHIPRLIRK 282 >UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Streptococcus RepID=B1IBZ3_STRPI Length = 278 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I +N+NV +V +D+ E +V+G+GI F K+ G+ I + +EK + + + E Sbjct: 1 MYRILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENQVEKIFRMKTEESRENF 60 Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +PL+ + II L+++ +Q+ +Y++LTDH + + Q + L Sbjct: 61 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQG-RYKDSNL 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA---GVT 177 DI YP FQ+ EA I ++L P+DE+ IA H ++A+ +E V Sbjct: 120 PDISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRK 179 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 +++R + +++ ++ + Y R + HL + + N S ++ +KQ+Y Sbjct: 180 EILRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSY 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+A++ +I I + +E ++L ++I+R+ Sbjct: 240 PKAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS 278 >UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Streptococcus RepID=B4U1G3_STREM Length = 283 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ + LNNN +V + + VVMG GI FQK+ G+ I +EK + L + E L Sbjct: 8 MFRLIRPLNNNAALVKNAANEQAVVMGAGIAFQKKKGDLIREEAVEKTFLLKNDEARENL 67 Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +PL+V+ +I L +Q +Y++LTDH A Q+ N L Sbjct: 68 LLLLKDVPLDVITVTYDVIDWLVLTYHYPVQQYLYVTLTDHIYAAYHMLQKGTYSVNR-L 126 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA--QMSGNMEDVAGVTQ 178 DI + + +E+++ + AL + +RL P DEV IA+H ++A + S + + + Sbjct: 127 PDISKEFGQEYEMAQAALEMFRQRLRTTFPDDEVTKIALHFINAKGEESSPQREHSSTKK 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L+ ++ + S Y RL+ HL + + + SL+Q +K+ YP Sbjct: 187 LLNQVEAALMANGITRTSTNSHFYDRLMIHLTYFIQSLDRKNQGYHAMGSLEQQIKKEYP 246 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +A++ I + +++ +E +++ I+I+R+ Sbjct: 247 KAYEIGNAIYQLMTDLTGQELVESEKIYIVIHIQRLL 283 >UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV3_9FIRM Length = 277 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 146/274 (53%), Gaps = 5/274 (1%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALS-SHELNGRLS 62 +I KILN+N ++V+ + E +VM +GIGF K+ GE + K+Y + S++ + + Sbjct: 3 EILKILNHNTILVLKEN-EEIIVMSKGIGFGKKQGENVEIPRNAKQYKMQKSYQAKQKSN 61 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 + +I + II+L +E+ GK++ I +SL DH FA+KR ++ NP D Sbjct: 62 NIFDYIDPMYIEISSEIITLTKEKFGKVEHDILLSLADHIYFAVKRIKEKDFPSNPFNMD 121 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 IQ ++P E+ + +A +I+K ++ +E+ FI +H+ SA + D V +++RE Sbjct: 122 IQLMFPDEYSVALKAKDVIEKYTHEEINAEEIAFITLHIHSAISVNKVGDSMEVMRVIRE 181 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++ ++ SLSY RL+ H+KFL R+ + + + K+ +P A++ Sbjct: 182 FFMKLQADLNIRIDANSLSYIRLMNHIKFLLLRLNNDEELQ---MDITEFTKEKFPFAYE 238 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A + + + + +E+ +LA+++ER+ Sbjct: 239 QARVLCEQLSHVLHKDLPDSELGYLALHLERILS 272 >UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lactobacillus RepID=LACT_LACCA Length = 292 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 92/279 (32%), Positives = 147/279 (52%), Gaps = 6/279 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I +I NNNV +V D + + VV GRGI FQKR G+ I + IEK + L++ L Sbjct: 3 KIAQIFNNNVALVDLDNRGQAVVRGRGIAFQKRRGDVIPTKQIEKIFYLANETSRQNLYF 62 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 LL +IP++V+ T II +AQ++ K+ D IYI+L+DH A KR+Q ++ D Sbjct: 63 LLKNIPIDVVTTTYEIIDVAQKQYRLKVLDYIYITLSDHIYEAYKRYQAGTY-QETMVPD 121 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ---L 179 YP E+ + ++AL II LGVQ P+ E+ +A+H ++A + E V G + L Sbjct: 122 FHIQYPAEYAVAKQALQIIATNLGVQFPQSEIKNLALHFINASGEDDGEQVFGKSNEASL 181 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAVKQNYP 238 + + +++K Y R + HL++L R+ + +KQNYP Sbjct: 182 SQLVQEVLKRHHITRSHSNGNYYDRFMIHLQYLIDRLQRVDTYAVTIVPEVATELKQNYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 Q+++ A I I Q R +S E ++ I+I+R+ E Sbjct: 242 QSYKIASEIFDEIKDQLYRSMSEDERLYFIIHIQRLINE 280 >UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ9_LACLK Length = 279 Score = 210 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 90/280 (32%), Positives = 162/280 (57%), Gaps = 6/280 (2%) Query: 3 MQITKILNNNVVVV-IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+I KILNNNVV+V +D+ ++E++VM G+GF K+ G+ I ++ + LS L + Sbjct: 1 MRIKKILNNNVVLVSVDNFKKEQIVMQNGLGFNKKVGDEIPEDSNQQVFVLSD-SLYKKY 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L ++ ++IIS A+E+ +L + I+++LTDH I RF + ++L N L Sbjct: 60 EHLTNNTDPIAAQIAEKIISYAEEKYQLQLNEMIHLTLTDHIDGVISRFSKGIVLRNELN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL- 179 +I R+Y +E+++G A+ + + + DE FIAMH+++ ++ + + T L Sbjct: 120 LEISRIYTQEYKVGLYAIDQLREVIKSSDLGDEAAFIAMHILNNRLDLDTSEEQIRTTLG 179 Query: 180 -MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + +++++++ F+ Y E SY R V HLK L+ R+ ++ + DE L +A+ YP Sbjct: 180 FISDIIKVVETYFNKKYDETLFSYYRFVMHLKGLAKRMYAK-NLFEEDEILYKALVAAYP 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + +CAE++A I L+Y IS E FL + IE++ +E+ Sbjct: 239 EPARCAEKVAKMIFLKYSLNISSEEKAFLTLYIEKLNREY 278 >UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C346E1 Length = 275 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 82/279 (29%), Positives = 160/279 (57%), Gaps = 10/279 (3%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K++NNNV++V +D Q+E V++G+GIGF +AG+ + + ++ + S + + Sbjct: 1 MYIIKKVINNNVILVDNDAQQEFVIIGKGIGFNSKAGQNYHCTEGDELF---SKPHDYDI 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQ-NVLLPNPL 119 + +IP+ ++ +I+ + L KL DS+ I+L++H FAI+R + + + Sbjct: 58 HNFVDNIPIGIIKLTLEVINKCKPILNAKLSDSLVITLSEHITFAIERSKNREMSIS--- 114 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQ 178 L+++ LY EF G+ A+ I+++LGV LP E IA+H V+A+++ ++ D TQ Sbjct: 115 LYEVPYLYHLEFIAGKVAVDYINEKLGVNLPPGEASLIALHFVNAKLNNKSVGDTLKFTQ 174 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL-EHASINDSDESLQQAVKQNY 237 + +++ +I + F + ++ S+ R + HLK+L R H + + L++ V++ Sbjct: 175 TVYKIVNIINYSFHIQVNTDADSFSRFINHLKYLLIRCQTNHDKSSQFNSVLEELVEKEL 234 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + CA++IA I +Y +S EI++LA++IER+ Sbjct: 235 LKNFACAKKIAALIQSEYTIPVSREEIIYLALHIERLLH 273 >UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4223B Length = 278 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 143/257 (55%), Gaps = 2/257 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K++NNNVV+ + E +++G+GIGF ++ G+ I + I+K + L E + Sbjct: 4 TYRIEKVVNNNVVIAQSPELNEVILIGKGIGFGRKKGQHIQADAIDKLFVLKDKEEQKQY 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ELLS + ++ + II + Q L K L + I+++LTDH QFAI+R +Q + + NP L Sbjct: 64 RELLSDLDEALIVHINEIIRMIQRELPKPLYERIHLALTDHIQFAIRRLEQGIEISNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + ++P EF L +A+ ++ L V+LP+ E+GF+A+H+ SA + + ++ QL+ Sbjct: 124 TETEMMFPNEFHLARKAVDYLNAHLTVELPEAEIGFVALHIYSASSNQPLSEMNEHPQLI 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E++++I + +++ S+ Y RLV+ L L R + I + L +K+ + Sbjct: 184 SELVEIIMEKGNVSLNRRSVEYMRLVSFLCELIDR-FQSTDIVNYSPKLSDVLKEEFELC 242 Query: 241 WQCAERIAIFIGLQYQR 257 + + + + ++ Sbjct: 243 YTVSSELINVLNQRFNT 259 >UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ANJ9_SEBTE Length = 281 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 78/279 (27%), Positives = 152/279 (54%), Gaps = 5/279 (1%) Query: 1 MNMQITKILNNNVVVVIDD-QQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 MN +I K+ +NNVV+ D + E + +G GIGF+ +AG I+ S IEK Y S E Sbjct: 1 MNFEIIKVFSNNVVLCEDKRKNTEIIAVGCGIGFKAKAGTFISDSAIEKLYGELSEEDKK 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 LS+++S+ E++ + + + + L KL ++++ H FAI+R + ++ NP Sbjct: 61 YLSDIMSNTDSEILDIVEDALKIIDKELKEKLSIYFHLTMLSHLSFAIERSKYGTIIRNP 120 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L +++ LYP+E+++ E+ + ++K L +L DEVGFI MH+ +A + + + Sbjct: 121 FLEELRVLYPQEYRIAEKFIAEVNKHLEYKLEIDEVGFITMHIHAALRGVKVSETSEQLT 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L E++++I+ + ES + RL+THLKF R+ + I + L +K+ Sbjct: 181 LTYELVKVIENELGHKIDRESYDFIRLLTHLKFAVNRVKNNIKIENI---LLPEIKKKLK 237 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ ++++A F Y + E+ ++ I++ +++ + Sbjct: 238 LYYKISQKVAKFAEKNYNILFNEDEVGYITIHLAKIKSK 276 >UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus RepID=D0R2Y6_LACJF Length = 279 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 143/281 (50%), Gaps = 8/281 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +I +ILNNNV +V ++ +VMGRG+ F K+ G+ I ++K + + Sbjct: 1 MEYRIAQILNNNVAIVHTRDNKQNIVMGRGVVFHKQKGDLIQEENVDKVFEIKDKNTVND 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+++PL+ + T +I Q + ++ IY++LT H A +R +N N Sbjct: 61 LTTLLANVPLDFVTTSYDLIDQVQAKYKFAVEPYIYVTLTTHLFGAYQRLIKNEEDVN-Y 119 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L D+ YP +Q+ ++ +T L + P+ E IA+H ++A S ++ + T+ Sbjct: 120 LPDLSDTYPIPYQIADDVITGFRNSLDISFPESEHKSIALHFINAHTSESINEDKNQTE- 178 Query: 180 MREMLQLIKFQFSLN----YQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVK 234 E++++++ + + N Q Y RL+ HLK+ R+ + + + ++ Sbjct: 179 NDEIIKVVQDELNRNGIYRTQPNVNDYDRLLVHLKYFINRLNNNEPDSLPISEGMIGEIE 238 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 NY QAWQ ++I + + Q +S +E +L I+I+R+ Sbjct: 239 NNYSQAWQIVQQIKELMQEKLQINLSLSEQTYLTIHIQRLI 279 >UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 Tax=Bacteria RepID=C3RHS5_9MOLU Length = 279 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 145/275 (52%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I KILNNN + ++ + E +++G G+GF + + I K Y L ++ L + Sbjct: 6 YRINKILNNNAIEIL-ENGTEIIIIGNGVGFNHKVNDYITMKENYKLYTLQNNLLKIQFK 64 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ IP + + II +A+ L + + +SL+DH F K + + + + Sbjct: 65 ALLNEIPFKCIELTQEIIDMAKTDLNRNFNQGLLVSLSDHINFVSKNYLKGYGSYSLVSE 124 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +E+++G +AL +I++ + L K E IA HL++A+ + N+ + + + Sbjct: 125 EIKRFYHEEYEVGLKALDLINRYYQINLNKKEASAIAFHLINAEFNNNVSKTTSILKSID 184 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L +I+ F L E+SL Y RLV HLKF R+++ S +++ E L + K + + Sbjct: 185 DILNIIEANFGLELPEDSLYYSRLVIHLKFFMQRVIKGESDDENFEKLIISAKSDINKKI 244 Query: 242 QCA-ERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + I ++ ++ +S AE +L ++I R+ Sbjct: 245 GITLDSIERYLNEEFDYVLSEAERFYLLVHISRII 279 >UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacillus plantarum RepID=C6VMT2_LACPJ Length = 220 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 127/219 (57%), Gaps = 5/219 (2%) Query: 65 LSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 ++ I E +II LA+++L + ISLTDH FA+ R + + N +LW+ Sbjct: 1 MADIEPEYFEVASQIIELAEQQLQTTFNVYLLISLTDHIHFAVYRHHHQMDIHNEILWET 60 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV-SAQMSGNMEDVAGVTQLMRE 182 +R+Y +EFQ+G +AL +I K V L +DE GFIAM V ++ N + +T+L+ + Sbjct: 61 KRIYHREFQVGMQALALIKKHFDVTLLEDEAGFIAMKFVENSMADSNTDQTLAMTKLIND 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND---SDESLQQAVKQNYPQ 239 +L ++K+Q SL +ES+S QR + HL+F + R+ D+ L + + + YP+ Sbjct: 121 ILNIVKYQLSLTMPDESVSLQRFLVHLRFFAERLTLKRPDQSQGADDDFLFEHLSKQYPR 180 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 A+ C ++IA+F+ ++ +S E ++L ++I+R+ E+ Sbjct: 181 AFACVQKIAVFVKKSTEQTVSVNERIYLIMHIQRMLNEN 219 >UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacillus johnsonii FI9785 RepID=D0R5U6_LACJF Length = 295 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 144/257 (56%), Gaps = 8/257 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH+ Sbjct: 1 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFIANSHQDEVNQ- 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP-LL 120 + I + +++I + + L K D +++L DH FA+ R + N+ + + Sbjct: 60 --VKEINASTIDLTNKVIQMVEPLLNVKFNDFQHLALADHIDFALSRIEDNIDISAANIR 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W+++ L+PKE+++ E+ + +I+K + V LP E F+ H V+A + +++ +T+ Sbjct: 118 WEVKNLFPKEYKISEKVIALINKEMKVNLPASESTFMTYHFVNAASDNDQVQETVEITEF 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA--SINDSDESLQQAVKQNY 237 + ++ +I++++ ++ ES +Y R +THL+ L R+L + + D SL +K Y Sbjct: 178 ISGIIDIIQYKYQMDLATESFNYSRFITHLRVLLVRLLRNKHHKSGELDGSLLGFMKIKY 237 Query: 238 PQAWQCAERIAIFIGLQ 254 A+ AE+IA ++ + Sbjct: 238 NHAYDTAEQIATYLHSK 254 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 60/133 (45%), Gaps = 5/133 (3%) Query: 146 GVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRL 205 + K E FIA + +++ E A L +++Q+++ ++ + + L Sbjct: 38 KIDESKIERRFIA-NSHQDEVNQVKEINASTIDLTNKVIQMVEPLLNVKFNDFQHLA--L 94 Query: 206 VTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIM 265 H+ F RI ++ I+ ++ ++ VK +P+ ++ +E++ I + + + +E Sbjct: 95 ADHIDFALSRIEDNIDISAAN--IRWEVKNLFPKEYKISEKVIALINKEMKVNLPASEST 152 Query: 266 FLAINIERVRKEH 278 F+ + ++ Sbjct: 153 FMTYHFVNAASDN 165 >UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_STAAR Length = 283 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 4/255 (1%) Query: 21 QREKVVMGRGIGFQKRAGERINSSGI--EKEYALSSHELNGRLSELLSHIPLEVMATCDR 78 +E +++G+GIGF K+ G +N I EK Y L S + L+ V+ Sbjct: 21 DQEVILIGKGIGFNKKEGMTLNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID 80 Query: 79 IISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEA 137 ++ + + +SLTDH FA KR +QN ++ NP + + +LY + + ++ Sbjct: 81 SLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQV 140 Query: 138 LTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 + ++ L V P+DE+GFIA+H+ S +M ++ + ++++ + +I+ + Sbjct: 141 IDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDK 200 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 ESL YQR + H++FL R+ I+ D+ + +K +YP + A +I I Q+ Sbjct: 201 ESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFV-SMIKNHYPICYNTAYKILTMIQKQFDV 259 Query: 258 KISPAEIMFLAINIE 272 IS +EI++L ++I Sbjct: 260 NISESEIIYLTLHIH 274 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%) Query: 74 ATCDRIISLAQERLGKLQDS---IYISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYP 128 + I + + L D Y H QF I+R ++ + + + I+ YP Sbjct: 181 NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP 240 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 + + LT+I K+ V + + E+ ++ +H+ + N Sbjct: 241 ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS 283 >UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriaceae RepID=O07655_ECOLX Length = 293 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 143/269 (53%), Gaps = 4/269 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNN V +E ++ G G+G+ K+ G + + + + + + N +L Sbjct: 20 MIIEKVMNNNCVQAS-MNGQEVIISGPGVGYNKKYGMLVPEHPANRIFYVRNEQKN-KLY 77 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ H+ +E ++ ++I+ A++ L K L S+ + L DH AI R + + N L Sbjct: 78 KLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLD 137 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY E+ + +ALTII+++ VQLP DE+GFIA+H+++ + + + +L + Sbjct: 138 EIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQ 197 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 + +LI+ ++ + S +Y R + HLK+LS R+L + I D + + + Sbjct: 198 IITELIEVVYNRKVERSSSNYSRFMMHLKYLSSRVLCNEKIKQKDIGDIYEQFLEKDILL 257 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAI 269 + I ++ ++ ++ E ++L+I Sbjct: 258 QRAIHEIERYLYATFKYELILEEKLYLSI 286 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 10/134 (7%) Query: 142 DKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA----GVTQLMREMLQLIKFQFSLNYQE 197 +K+ G+ +P+ I ++ + Q + + + + +++Q + N Sbjct: 50 NKKYGMLVPEHPANRI-FYVRNEQKNKLYKLIEHVDIEYVSVAEKIVQYAEKNLEKNLNP 108 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 L L H+ R++ IN+ +K Y + + I Q+ Sbjct: 109 SLLLI--LADHISNAISRVVSGIQINN---VFLDEIKALYKAEYAISRDALTIINEQFSV 163 Query: 258 KISPAEIMFLAINI 271 ++ EI F+A++I Sbjct: 164 QLPDDEIGFIALHI 177 >UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1A7_ERYRH Length = 289 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 143/275 (52%), Gaps = 5/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ + +N+V D+ + +++G+GIGF ++ I+ + Y + + + Sbjct: 18 FKVVRAFTHNIVFAQLDKY-DYILIGKGIGFDAKSKAVIDEESVTSFYRIQDLDKMSQYE 76 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ + +V+ + I+ A++ L K +SI+ISL DH FAI R+ V + N Sbjct: 77 KIVMNTDDQVLLVTEAAIAYAEKTLNYKFDESIHISLLDHINFAIYRYHNRVKMSNFFTE 136 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +Y + + + + + +I+ L V+LP EVG + +HL +A G + + A Q++ Sbjct: 137 EYYLMYSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAAMHQGKVSNSAFYAQVIT 196 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 + I + + + S+ RL+THLKF R ++ ++ + L +++ Y +A+ Sbjct: 197 ASVDFINKRIPEEFTQNSVGKARLITHLKFAFKRSEDNVTLTN---PLIDILRERYCEAY 253 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + +E +A+ + ++ ++ +EI ++A++I ++ Sbjct: 254 EISEDLALMLDQEFNIQLPESEIGYIALHIYNLQH 288 Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 39/108 (36%), Gaps = 5/108 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 M V + + + + + E S+ L+ H+ F +R +++ Sbjct: 80 MNTDDQVLLVTEAAIAYAEKTLNYKFDE-SIHIS-LLDHINFAIYRYHNRVKMSN---FF 134 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y + + ++ + I + ++ +E+ + +++ + Sbjct: 135 TEEYYLMYSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAAMHQ 182 >UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lactobacillus gasseri RepID=Q045X5_LACGA Length = 304 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 143/281 (50%), Gaps = 9/281 (3%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I ++ NNN +V RE VV+G GI F+K G+ I++S +E + L + + L Sbjct: 21 IKRVFNNNSALVELGNNREAVVVGNGIAFKKTEGKEIDTSKVENIFYLENSATKRTIFSL 80 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L + P+++ T +++ A ++ +L D Y+SL++H R N + + DI Sbjct: 81 LKNTPIDIAVTTMHVVNHAYKKYHYELFDYFYLSLSEHILGVYHRILDNTYQTSQI-PDI 139 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-MRE 182 + YP E ++ +E++ II++ L ++LP E I +HL++A++ + + + E Sbjct: 140 KDEYPLENKIAQESVKIIERDLKIKLPVSERKNIMLHLINARIPEKKQVNREKNIINIEE 199 Query: 183 MLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQQAVKQN 236 ML +++ + Y+R + HL++L R+ + SD + ++ + Sbjct: 200 MLHIVQVILDQHNIYRLASNNDEYERFMIHLQYLFRRLEQGKKFRSSDITKKVKDELISE 259 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+++ + I + +Q +IS E ++L ++I+R+ ++ Sbjct: 260 YPESFVVVKEIDEQLKQDFQWEISDEEKLYLIVHIQRIYEK 300 >UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFC1_9FIRM Length = 290 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 132/283 (46%), Gaps = 7/283 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGF--QKRAGERINSSGIEKEYALSSHELN 58 M+ K +NNN + ++ E +++G+ IG + ++ IE+ + +E Sbjct: 3 MDYFYLKTINNNAICATNEYHHEVIILGKAIGIKCNRSFHSLVDKKLIERVFIA-DNENR 61 Query: 59 GRLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPN 117 + ++ IP + D +I A++ L K +D +Y+SL DH FA K ++ + N Sbjct: 62 KYIETIIGQIPYTLFKVVDDVIKQAEDDLQTKFKDVLYLSLLDHIYFAYKTWEDKQKIEN 121 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 PLL +++ KEF + ++ II+ L + E FIA H ++A + + + Sbjct: 122 PLLNELKMFNSKEFNAAKHSIQIINNTLKTDFDEHEAAFIAFHYINALSNLSSFQNKTIM 181 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ---AVK 234 + + + + I + + + S Y RL+ HLK L R++ I + ++K Sbjct: 182 KDLEQTVNYIDKLTNYSLDKSSYLYGRLLIHLKCLFNRLVTDERIEYDAAFINDFSNSLK 241 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + W+ A +I+ F+ + ++ E +L ++I + K+ Sbjct: 242 VAHEEEWEYAVKISSFMKYELHLNVNDGETAYLTMHIVPILKQ 284 >UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR0_9ACTN Length = 188 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 103/187 (55%), Gaps = 5/187 (2%) Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 + L DH Q+A++R + + NPL ++ +YP+E +LG + ++ +R+GV LP+ E+ Sbjct: 1 MVCLADHLQYALERTGDGIAIENPLSHEVAFVYPREVELGRRGIELVSERMGVNLPESEI 60 Query: 155 GFIAMHLVSAQMSG-----NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHL 209 IA+HLV+A++ G +M+ V T ++ Q+I+ Q S +Y R V HL Sbjct: 61 TSIALHLVNAEVDGMGSSQDMDLVMKSTVILERATQVIEGQLGQQLDRTSYAYVRFVAHL 120 Query: 210 KFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 +FL R++ + L + +++P A++CA I ++ Y S E+++L + Sbjct: 121 RFLIRRLMRGGCKETENSGLFRQAARDFPDAYRCAAGINEYLKRDYNWSCSDEEMLYLMM 180 Query: 270 NIERVRK 276 ++ R+R+ Sbjct: 181 HVNRLRQ 187 >UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7R7_9FIRM Length = 201 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 122/179 (68%), Gaps = 1/179 (0%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 V +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP+ V+ Sbjct: 19 VSSLDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVNVL 78 Query: 74 ATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQ 132 D II A++ L K L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E++ Sbjct: 79 NVTDEIIDFARKGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYK 138 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQF 191 + EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 139 IAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHL 197 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 + V + E++ + + Y L H+ + R L+ ++ + L Sbjct: 72 DIPVNVLNVTDEIIDFARKGLDKELNDG--IYITLTDHINYAIERYLQGINVQN---PLL 126 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 ++Q Y + ++ A I + +S E+ F+A++ Sbjct: 127 WEIRQFYQEEYKIAAEALKIINQKLMVNLSEDEVGFIALH 166 >UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWD6_9BACI Length = 287 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 9/280 (3%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ K LNNNV++ D +E + +G+GIGF K+AG +S +K Y L + R Sbjct: 5 TYRVVKALNNNVLIAKTDIDQEVIFIGKGIGFGKKAGHDYQASKSDKVYMLIDQDEQDRY 64 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L++ E + I+ + + +L DS +LT H A++R + NP L Sbjct: 65 KALVTEDNEERLLAVHEAIARIESEMAIRLPDSALFALTQHLALALQRTTDGTDIQNPFL 124 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ-L 179 + + LY ++L E+A+ + K G+ LP+ E+GF+ +H+ SA E + + Sbjct: 125 LETKWLYRDSYRLAEQAVHFLMKETGLSLPEAEIGFVTLHIQSALRDSGPEYSNRNLEDV 184 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV---KQN 236 + L I+ + + E S + +RL++ +I+ +D + + A+ KQ+ Sbjct: 185 LERCLFYIEEKTGASLDERSGTVRRLISQ----ISQIVHEPDPDDGENIVTDAILNLKQS 240 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + + I ++ + + L + + V Sbjct: 241 DGLCYTVSRNVIRMIEKGTGKQAGDKDALHLMLALHSVMN 280 >UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG9_9FIRM Length = 217 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 125/209 (59%), Gaps = 1/209 (0%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ IP E + I A+E G L ++ ++L DH FAIKR ++N++L NP + Sbjct: 1 MIGAIPPEYFELVEEIFEKAKEEYGFLPKEKETLALLDHIHFAIKRMKENLVLDNPFETE 60 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I++ YPKE+++G A I +R G+++P EVG+IAMH+++++ + V+ +++ Sbjct: 61 IRQFYPKEWEIGLYAKKCIKRRFGIEIPDAEVGYIAMHIIASEFQKSRRTVSKTFEVIDL 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 L+ I+ + + +E+SL+Y RLVTH+K+ + R +++ D DE L Q +K+ + + Sbjct: 121 ALKYIRDNYLTDVKEDSLAYTRLVTHVKYFAQRYVDNKESMDEDELLDQTIKERFQREVC 180 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINI 271 C E ++ + +Y R ++ +E +L +++ Sbjct: 181 CIEGLSEMLYRKYGRPVTVSEENYLVLHL 209 >UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BY17_LISGR Length = 249 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 136/246 (55%), Gaps = 7/246 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 + + LNNN+ +V + E +V+G+GI F K+ G+ I+ + + + + + + ++ E Sbjct: 5 ILKQPLNNNIAMVSQE-GEELIVIGKGISFGKKIGDEIDINKVSRVFKAQNELASTQIEE 63 Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +++ +P + ++I +L + + I +SL DH QFA++ QQ + +PL W+ Sbjct: 64 VIAAVPEFYLKIAEKIAALGEAATRQQFNFGIILSLADHIQFAVECAQQEYRIKSPLQWE 123 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMR 181 ++ L+P E + G EA+ I+ ++ LP ++ IA+H V+A +++ ++ ++R Sbjct: 124 MKTLFPLEVRAGYEAIDYINTQIDADLPSEDAYAIALHFVNANKGNLLIKETEKLSLIVR 183 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVKQNY 237 +++ LI +++ ES+ Y R VTHLK+ +R+LE + S+ES L Q + +NY Sbjct: 184 DIIDLINGFYNIQINRESIDYIRFVTHLKYYLYRMLESRQVGKSEESEIDMLTQLISENY 243 Query: 238 PQAWQC 243 C Sbjct: 244 RDTLIC 249 >UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUJ1_9FIRM Length = 283 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 138/280 (49%), Gaps = 7/280 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ + LN N V+V D E V +G+G+GF K+ G+ I+ + + + ++L+S +L Sbjct: 1 MKVIQSLNQNAVLVARDDGAELVALGKGVGFGKKKGDTIDPTAVTRVFSLASSYRQEQLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + V I +A+ L K L D+ ++ H Q+A+ R +P + Sbjct: 61 GLIKELEPWVFELAQDITIIAEACLKKSLMDTFIFTIAKHLQYALDREPNEEGDYDPFQY 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 + LYP E+Q EA+ ++ + ++L ++EV F+ +HLV+ Q+ +V +++++ Sbjct: 121 QLHYLYPDEYQAAAEAIAQVNAKYQLRLAQEEVSFLTLHLVNGQIDQAGFHNVVELSEIL 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-----LQQAVKQ 235 ++Q+I+ + +ES Y R V H+++ R L H + ++ + + Sbjct: 181 NRLIQVIEAKTGEPLDKESPDYGRFVVHIRYFLIRTLSHQTGQEAVSPEKIETVLETTAG 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +P+ W + + + ++ E +L +++ R+ Sbjct: 241 VFPREWGLVKALKETLQAEFNLSFGQDEDFYLLLHLVRIL 280 >UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU78_9BACI Length = 182 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 +LTDH FAI R + + + NP L + + LY E+++ + + ++++ V+LP+ E+GF Sbjct: 1 ALTDHILFAINRLMKGMAIRNPFLMETKALYLFEYEVARDVVALLNEETNVELPEGEIGF 60 Query: 157 IAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI 216 IA+H+ SA M+ ++ V ++L+ + I+ N +ES+ Y RLV HL++ R+ Sbjct: 61 IALHIHSAMMNKDLSQVNQHSRLIGTLTSTIENTLEANIDKESVHYMRLVRHLRYTIERV 120 Query: 217 LEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 L + + E + +K+ YP + + ++ + ++ + AE ++L ++++R++ Sbjct: 121 LRQERVQEP-EKIALLLKEEYPLCYNLSWKLIKIMQQTLKKPVDDAEAVYLTMHLQRIQN 179 Query: 277 E 277 + Sbjct: 180 K 180 >UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9E2_9CLOT Length = 168 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLMRE 182 QR YP+E+Q EAL I V LP DE G+IA+H V+A Q M+ VT+ ++E Sbjct: 11 QRFYPREYQAAREALKTIAYYENVWLPDDEAGYIALHFVNATQEGEEMQTTIQVTETVQE 70 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++++I+ F+++ E SLSYQRL+TH+++ R+ + D+ L + VK YP+++ Sbjct: 71 LIKMIQIHFNMSLDETSLSYQRLITHIRYFVRRLFVNEPAGGGDDLLFEQVKSAYPRSYT 130 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C +I + +++ +I+ E+ +L ++I RV Sbjct: 131 CVCKIRDYFRMKFHCEITEEEMTYLMLHIRRVTS 164 >UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GN87_BIFLI Length = 192 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 3/164 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D + RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLAKD-RGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNV-LLPNPLL 120 +LL IP E++ + + ++ I+L DH A++R + + +P PL Sbjct: 60 QLLGDIPPEIIRLISETMDGIGLSSEAAQSSTLVIALADHVCGALRRAKNGIPPVPYPLN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 +I+ LY +E+Q G L +++RL L E A+H V+A Sbjct: 120 SEIRSLYEREYQQGCALLAALNRRLDDALDPSESVAFALHFVNA 163 >UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebacterium glucuronolyticum RepID=C2GFH3_9CORY Length = 333 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 40/307 (13%) Query: 2 NMQITKILNNNVVVVIDDQQR-----------------------------EKVVMGRGIG 32 N +I ++L+NN V+V +V++GRGIG Sbjct: 25 NPRIIRVLSNNAVLVRVPSGVPGEDTAQRAQNTAQNTNTNNTNNTQPTQDTQVLVGRGIG 84 Query: 33 FQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQD 92 FQ++ G+ I+ + +++Y S E L +LS + VM T + LA + LG+L Sbjct: 85 FQRKPGDEISPATADRQYLELSPERAQFLKGVLS-LDPAVMETISAAVDLAVDLLGELHP 143 Query: 93 SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRL-GVQLPK 151 S+Y+ L +H FA++R + N L+ +I+ +P EFQ + ++ I+ LP Sbjct: 144 SVYVVLAEHISFAVQRAGSGEQIRNSLVDEIRAAFPLEFQAAQLMVSYINSHTANATLPV 203 Query: 152 DEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTH-LK 210 DE FIA+HL +A+ ++ V + +L+ + + + V H L Sbjct: 204 DEAAFIALHLNAARQGVTVKQPLAVANELAGLLRFVCARLGATTTT----FDGTVDHSLA 259 Query: 211 FLSWRILEHASINDSDESL-QQAVKQNYPQAWQCAERI-AIFIGLQYQRKISPAEIMFLA 268 R+ +L +++++++ P + A+++ I + + E +LA Sbjct: 260 LELTRMSNRVGSKQFRSNLARRSIERDLPSEFDVAQQVLCRMIDVPTLPSHAAGEAAYLA 319 Query: 269 --INIER 273 ++ R Sbjct: 320 VFLHGWR 326 >UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Y8_9BACI Length = 200 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 2/190 (1%) Query: 68 IPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 + + + + I + R G L + I+I LTDH FA+KR + + NP L + + Sbjct: 2 VDEQFVGVMNEFIDKLETRFGANLNEHIHIGLTDHLHFAVKRIENGQGIHNPFLQETELA 61 Query: 127 YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQL 186 YP+EF + E ++G+++P E+GFI +H+ SA + ++ D+ TQ++ E++ + Sbjct: 62 YPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIHSALTNRDLGDINRHTQMVSELVGM 121 Query: 187 IKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 I+ + ++Y RLV HL RI +++ D L+ +++ YP + A + Sbjct: 122 IEENLKMTIDRRDMNYLRLVRHLHHAIERIQFENYVDNQDA-LKAVLQKEYPVCYNLAWK 180 Query: 247 IAIFIGLQYQ 256 + + + Sbjct: 181 LMKVMQRRLN 190 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +M E + ++ +F N E L HL F RI I++ Q Sbjct: 4 EQFVGVMNEFIDKLETRFGANLNEHIH--IGLTDHLHFAVKRIENGQGIHN---PFLQET 58 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 + YPQ + A + + G Q +I P EI F+ ++I Sbjct: 59 ELAYPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIH 97 >UniRef50_A0FL05 Putative transcriptional antiterminator (Fragment) n=1 Tax=Lactobacillus paracasei RepID=A0FL05_LACPA Length = 231 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 10/227 (4%) Query: 36 RAGERINSSGIEKEYAL---SSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQ 91 + E + + + + EL IP D IISLAQ+ + + Sbjct: 2 KRDEEYFPTEDDHVFLPVSRDDSQWVDSFKELAREIPRSYFELTDSIISLAQKSINVEFD 61 Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPK 151 + I LTDH FA++R + +++ NP+L+DI+RL+PKEFQ+G+EAL +I V Sbjct: 62 GHLLIPLTDHIYFAVQRIKSGLVVSNPMLFDIRRLFPKEFQVGQEALALISSFSDVSFSD 121 Query: 152 DEVGFIAMHLVSAQMSGNMEDVAGVTQ---LMREMLQLIKFQFSLNYQEESLSYQRLVTH 208 DE GFIAMHL+ +++ V V++ ++ + +++ + + E SL+ R+ TH Sbjct: 122 DEAGFIAMHLIEHELTETNSSVQSVSEALDILSGVNEILGKDYGEKFSESSLAVSRMATH 181 Query: 209 LKFLSWRILEHAS---INDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 L +L R + + D L +K+ YP A RI I Sbjct: 182 LYYLLLRTHDGKKVDLVETDDTVLLCQLKKQYPNAGLDVGRIVALIE 228 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 E +L ++ L + ++ + + L H+ F RI +++ + Sbjct: 36 EIPRSYFELTDSIISLAQKSINVEF--DGHLLIPLTDHIYFAVQRIKSGLVVSN---PML 90 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +++ +P+ +Q + I S E F+A+++ Sbjct: 91 FDIRRLFPKEFQVGQEALALISSFSDVSFSDDEAGFIAMHL 131 >UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=Corynebacterium glutamicum RepID=Q6M215_CORGL Length = 196 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 103/190 (54%), Gaps = 8/190 (4%) Query: 96 ISLTDHCQFAIKRFQQNVLL---PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ---- 148 ++L DH Q A+KR + L PNPL ++ LYP+E +L E L + L + Sbjct: 1 MALADHLQMAVKRNELEPELTSNPNPLSAEVHHLYPEETRLATEILERTNNWLAEKGIPP 60 Query: 149 LPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 LP EV I++HLV+A ++ + +T + ++ ++I F + +S++ R +T Sbjct: 61 LPPAEVVAISLHLVNAGFRTEDLAETYVMTGVFEQLFEVIDSSFGITLDRQSVNAARFIT 120 Query: 208 HLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFL 267 H+++ R+ +ND L+ +++ ++P + CAER++ + L+ ++S E +L Sbjct: 121 HMRYFFVRVHHDGQLNDGMSVLRNSLEISHPDSVACAERLSQILSLRLGAELSSDEQTYL 180 Query: 268 AINIERVRKE 277 A+++ R+ ++ Sbjct: 181 ALHVARLAED 190 >UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDR3_9STRE Length = 199 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 107/194 (55%), Gaps = 3/194 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I + LNNNV +V ++Q + VVMG GI FQK+ + I S +EK + L + E Sbjct: 1 MFRIVQALNNNVALVKNEQDDQAVVMGLGIVFQKKKSDLITPSKVEKVFLLKTEESKENF 60 Query: 62 SELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +I L+++ +I L + +Q+ +Y+S TDH ++ + L Sbjct: 61 LTLLKNILLDILTVTYNMIDDLVAKYHFPVQEYLYVSPTDHVYLVYQKLLKGAH-QESHL 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI Y EFQ+ +EA+ I+ ++L V P+DE+G IA+H ++A+ G + +++ Sbjct: 120 PDISAAYVTEFQMAQEAVAILSQKLSVTFPEDELGRIAIHFINAKREGEVTPSFQISR-T 178 Query: 181 REMLQLIKFQFSLN 194 + +L+L+K +FS + Sbjct: 179 KHILELVKQEFSRD 192 >UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TMP5_ALKMQ Length = 163 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 11/173 (6%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + KILNNNVV+ D + +++G+G+GF K+A + I+ + +E+ + Sbjct: 1 MYYVEKILNNNVVIAEKDNLQ-YILVGKGLGFGKKARDTIHKNDVERAFVSIEE------ 53 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ E++ + II +A+++LG+ L D ++ L DH FAI R Q+ + + NP L Sbjct: 54 ---LNIKGDEIVGVSEEIIVMAEKQLGESLGDKVHTGLIDHIHFAINRIQEGINISNPFL 110 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 + + LYP EF + +A+ ++ RLG+ +P+DE+GFIA+H+ + + + V Sbjct: 111 NETKALYPVEFSIASQAVALLCVRLGIDVPQDEIGFIALHIRANRKNLKKSKV 163 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + E++ + + Q + ++ L+ H+ F RI E +I++ K YP Sbjct: 64 VSEEIIVMAEKQLGESLGDKVH--TGLIDHIHFAINRIQEGINISN---PFLNETKALYP 118 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + A + + ++ + EI F+A++I Sbjct: 119 VEFSIASQAVALLCVRLGIDVPQDEIGFIALHI 151 >UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Clostridium perfringens RepID=Q8XP92_CLOPE Length = 194 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRL 61 ++ + NNN+V+V DD ++E ++ +GIGF + G I + IEK + + Sbjct: 9 YEVKRSFNNNIVLV-DDDEKEIILFAKGIGFNCKKGSIIPENTNIEKIFTIQDENNIANF 67 Query: 62 SELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ + +A C+ +I ++++ +L + I+I L DH FAI+R ++ +L NP L Sbjct: 68 RRVVGSNDEKFIAFCEELILEISRDFSDELNEIIHIGLIDHISFAIERMKKGEILRNPFL 127 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 +I+ LYPKEF+ + + ++ GV + DE+GFIA Sbjct: 128 VEIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIAYAY 168 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 + E++ I FS E + + L+ H+ F R+ + + + Sbjct: 73 SNDEKFIAFCEELILEISRDFSDELNE--IIHIGLIDHISFAIERMKKGEILRN---PFL 127 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLA 268 ++ YP+ ++ A ++ + I EI F+A Sbjct: 128 VEIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIA 165 >UniRef50_D0Z7Y6 Transcriptional antiterminator n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7Y6_EDWTE Length = 178 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 109/173 (63%), Gaps = 4/173 (2%) Query: 1 MNMQITKILNNNVVV----VIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHE 56 M M+I KILNNNVV+ +D +QRE V+MGRG+ F + G+ ++ IEK +AL + Sbjct: 1 MMMRIAKILNNNVVLVLVLALDSRQRELVMMGRGLAFHQCVGDILDEGRIEKIFALQCNR 60 Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 L+ R ++ H+PL+ +ATC+RII GKLQ + +L ++C AI+R ++ ++ Sbjct: 61 LSCRPHNMILHLPLDAIATCERIILSVYTGQGKLQAGLASALAEYCYCAIERHRRGAVIH 120 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 N LL +I YP+EF LG + ++I + + L DEVGFIA+H V A+++ + Sbjct: 121 NALLREIIGRYPREFALGLQVKSLITQYFSLALSHDEVGFIALHFVMARLNSH 173 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 212 LSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 R A I+++ L + + YP+ + ++ I + +S E+ F+A++ Sbjct: 109 AIERHRRGAVIHNA---LLREIIGRYPREFALGLQVKSLITQYFSLALSHDEVGFIALH 164 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 97/217 (44%), Gaps = 13/217 (5%) Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL + + ++ ++ I +E+L + DS YI+ H AI+R +Q + Sbjct: 197 KLLGLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIERIKQGEAIHF-DPR 255 Query: 122 DIQRL-YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL- 179 D+Q L KE+++ +++ G+ +P +EVG++ MHL+ A+ + L Sbjct: 256 DLQALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWRSRQGAMMEEPSLA 315 Query: 180 ----MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +++++ + + ++ + Y+ LV HLK +R+ + + L +KQ Sbjct: 316 VGMKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGVAN---PLLDQIKQ 372 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 +Y + + A + + EI +L ++ Sbjct: 373 DYAELFAIVADGARQLFG--DIPVPDEEIGYLVLHFA 407 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 56 ELNGRLSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQN 112 + R ++ L V ++I ++LG ++Y L H + A+ R + Sbjct: 300 KWRSRQGAMMEEPSLAVGMKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHG 359 Query: 113 VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 + + NPLL I++ Y + F + + + + +P +E+G++ +H +A M Sbjct: 360 MGVANPLLDQIKQDYAELFAIVADGARQLFG--DIPVPDEEIGYLVLHFAAALMREK 414 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 97/273 (35%), Gaps = 33/273 (12%) Query: 17 IDDQQREKVVMGRGIGFQKRAG--------ERINSSGIEKEYALSSHELNGRLSELLSHI 68 D Q E V+ G+G K+AG E + + + LS HE +L+ I Sbjct: 39 RDLQGIESVLRRYGLGLAKKAGIGIRLVGEEENKQALAAELFRLSHHEYTPEERQLMIFI 98 Query: 69 PLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 L +++SLA L ++ + L D + ++ + L +R Y Sbjct: 99 ALLEANEPVKLVSLA-TDLNVTVATVSLDL-DKVEQTVE--AYGLSLIR------KRGYG 148 Query: 129 KEFQLGEEALTIIDKRLGV-QLPKDEVGFIAMHLVSAQMSGNMEDVAG---------VTQ 178 E E A + L + + E + + + ++ VA Sbjct: 149 VELAGSESAKRRLMSDLLFRHVDEHEFLALMKETIQKRADAPLDTVAEKLLGLVDRKKLS 208 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ + ++ +K + + S Y V HL RI + +I+ LQ Sbjct: 209 IIEQQIERVKEKLPFTMADSS--YIAFVVHLALAIERIKQGEAIHFDPRDLQALQATK-- 264 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ A +A + + I E+ ++ +++ Sbjct: 265 -EYEIARVLAESLERAFGIDIPNEEVGYMTMHL 296 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 101/237 (42%), Gaps = 17/237 (7%) Query: 49 EYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIK 107 Y SS ++ ++++L I + + C I +A+ L D+ + L H AIK Sbjct: 192 IYTRSSVGIDKQITKLFEDIDIPYIEEC---IQIAERELETVFSDAAFSGLVIHIAIAIK 248 Query: 108 RFQQNVLLPNPLLWDIQRL-YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM 166 R Q + P +++ L KEF + +++ V +P DE+G+I +HL+ + + Sbjct: 249 RIQLGKDIIMP-KEELKALEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNV 307 Query: 167 SGNMEDVAGVTQ----LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI 222 S L +++ + + + + ++ L+ HL+ +R+ + Sbjct: 308 SKTRPYPNENWVEYQLLTEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKL 367 Query: 223 NDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVR 275 + + +K NY + ++ + + + ++ EI + I+ IER++ Sbjct: 368 KN---PILDEIKANYKELFEIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLK 421 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 52/113 (46%), Gaps = 3/113 (2%) Query: 71 EVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 E ++II+ ++ + ++ L DH + + R + + L NP+L +I+ Y Sbjct: 320 EYQLLTEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKLKNPILDEIKANY 379 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + F++ +E+L ++ G L +E+G+ +H +A + L+ Sbjct: 380 KELFEIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLKVTKAPKPNILV 432 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 32/270 (11%) Query: 16 VIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMAT 75 V+++ EK ++G QK+A E +L+S I L + Sbjct: 167 VLEETANEKELVGFLRQIQKKALEE----------RNLEPGFFKEFDKLVSGIDLTKIE- 215 Query: 76 CDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL--LWDIQRLYPKEFQ 132 +IS A+++LG + D Y SL H AI R + + P L I++ E++ Sbjct: 216 --SVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQLPEERLKVIKK--SDEYK 271 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-----------NMEDVAGVTQLMR 181 + ++ I+++ + +P E+G++ +HL+ A++ N + + L + Sbjct: 272 IAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLINQDLDQELIILTK 331 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 EM+++ + + +++ L HLK RI + + L VK Y + + Sbjct: 332 EMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKN---PLLLDVKSRYGEIF 388 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + A+R A + + Q+ IS EI ++ +++ Sbjct: 389 KAAKRAAKILQSKLQKSISSDEIGYITLHL 418 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 58 NGRLSELLS-HIPLEVMATCDRIISLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNV 113 + +L++ + E++ ++ +A++ LG KL D + I L H + I R + ++ Sbjct: 311 DDDYKKLINQDLDQELIILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDL 370 Query: 114 LLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 L NPLL D++ Y + F+ + A I+ +L + DE+G+I +HL +A Sbjct: 371 PLKNPLLLDVKSRYGEIFKAAKRAAKILQSKLQKSISSDEIGYITLHLGAALERSKSSR 429 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 21/204 (10%) Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYPKEFQLGEEALTIIDKRLGV 147 + Y +L H A+ R +P + + DI+R E+ I RLG+ Sbjct: 177 INAISYQNLLVHIAIALVRINAGCYVPLASEDMSDIER--RSEYAAARRVAGGIKSRLGM 234 Query: 148 QLPKDEVGFIAMHLVSAQM----------SGNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 +LP++EV +IA+HL + G + + L+ +ML ++ F ++ E Sbjct: 235 ELPEEEVAYIAIHLAGKRTLNDALSNEEPEGGLVISDEIWALVSDMLDSVRTHFHFDFDE 294 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 + L HL L+ R+ ++ + L + +YP AW A + ++ Sbjct: 295 DIELRMNLARHLVPLAVRLRSQMNLKN---PLLGDITTHYPLAWSMAVDACEVLHREFGT 351 Query: 258 KISPAEIMFLAI----NIERVRKE 277 S EI ++A+ +ER R + Sbjct: 352 APSNDEIGYIAMAFALALERQRSQ 375 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 3/116 (2%) Query: 68 IPLEVMATCDRIISLAQERLGKLQDS---IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I E+ A ++ + D + ++L H R + + L NPLL DI Sbjct: 269 ISDEIWALVSDMLDSVRTHFHFDFDEDIELRMNLARHLVPLAVRLRSQMNLKNPLLGDIT 328 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 YP + + +A ++ + G DE+G+IAM A + ++ Sbjct: 329 THYPLAWSMAVDACEVLHREFGTAPSNDEIGYIAMAFALALERQRSQAPRKRLLVV 384 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Query: 171 EDVAGVTQLMREMLQLI-----KFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS 225 E + + RE L++I ++SYQ L+ H+ RI + + Sbjct: 146 ESLFQRMGMQRESLEVIAASVEDALTDGPININAISYQNLLVHIAIALVRINAGCYVPLA 205 Query: 226 DESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 E + +++ + A R+A I + ++ E+ ++AI++ Sbjct: 206 SEDMSDIERRS---EYAAARRVAGGIKSRLGMELPEEEVAYIAIHLA 249 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 56 ELNGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVL 114 +++ LL I E + + +S E L L DS Y+ L H A++R ++ Sbjct: 190 DIDSIAERLLGLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEG 249 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 + + E+++ + + + +++P DE+G+I MHL A++ + +D Sbjct: 250 IHFDEHTLSELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPDDQV 309 Query: 175 GVTQ-----LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + + +Q + + + ++ + L+THL+ +R+ I + + Sbjct: 310 WPENTELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRN---PI 366 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKE 277 + +KQNYP+ + I + ++ EI +L ++ +ER R E Sbjct: 367 LEQIKQNYPELFAVTSEAVHTILPEL--RVPDEEIGYLVMHLGAALERTRHE 416 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 71 EVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 E+M R I +ERL S++ L H + A+ R Q+ + + NP+L I++ Y Sbjct: 315 ELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRNPILEQIKQNY 374 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 P+ F + EA+ I L V P +E+G++ MHL +A E Sbjct: 375 PELFAVTSEAVHTILPELRV--PDEEIGYLVMHLGAALERTRHEQ 417 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 103/226 (45%), Gaps = 10/226 (4%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKR 108 Y ++ LL+ I + + ++ I + ++ ++ +S Y+ L H AIKR Sbjct: 181 YLAKNNIEKNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKR 240 Query: 109 FQQNVLLPN--PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM 166 Q + L ++++ E++ ++ + + L + +P+DE+G++ +HL+ A+ Sbjct: 241 LQNGETIEMGEDNLQELKKT--NEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKY 298 Query: 167 SGNMEDVAGV--TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND 224 ++ + R+M++ + F +++ E+ L +HL +R+ I + Sbjct: 299 RSTTQNYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRN 358 Query: 225 SDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 L + +K YP ++ + R+ + + I E+ ++A++ Sbjct: 359 ---PLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMH 401 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 3/118 (2%) Query: 66 SHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ ++ +I A++ + + L H A+ R + + + NPLL D Sbjct: 304 NYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLLED 363 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 I+ YP F+ ++ K+L + +P+DEVG+IAMH +A ++ Sbjct: 364 IKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVV 421 Score = 64.0 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 57/117 (48%), Gaps = 3/117 (2%) Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSW 214 G++A + + + + ++ +++ ++K + ++Y+ SY LV HL Sbjct: 180 GYLAKNNIEKNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIK 239 Query: 215 RILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 R+ +I +++LQ+ K N ++ A+++A ++ + I EI ++ I++ Sbjct: 240 RLQNGETIEMGEDNLQELKKTN---EYKFAKKLAKYLQEELDIPIPEDEIGYVTIHL 293 >UniRef50_C4VQU1 Cryptic beta-glucoside bgl operon antiterminator (Fragment) n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VQU1_9LACO Length = 139 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 + N LLWDI+ YPKE+++G AL II+ +L DE GFI MH+V AQM DV Sbjct: 1 MKNNLLWDIKHFYPKEYKIGLAALDIIEHLTSFRLNDDEAGFITMHIVDAQMEQGSHDVN 60 Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAV 233 G+TQ ++E+ Q++K+ E S Y R +THLK+L+ RI H I D+ + + V Sbjct: 61 GITQFIQEITQILKYACHQEIDENSSYYYRFITHLKYLAQRIFNQHQDITPPDKMMLKLV 120 Query: 234 KQNYPQAWQCAERIAIFIG 252 + YPQ++ A +I FI Sbjct: 121 ENQYPQSFIYARKIIAFIE 139 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 15/220 (6%) Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQN--VLLPNP 118 + LL+ I E + T + +I +A+E +G KL DS Y+ L H AIKR + N +++ Sbjct: 203 NRLLNLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNEIIIMDKE 262 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT- 177 L ++ + EF + + + + + +DE+G+I MHL+ ++ GN+ T Sbjct: 263 FLNELNQN--PEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSKNRGNVTKNETSTI 320 Query: 178 ------QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 +L REM+++ + + LV HL+ RI I + L Q Sbjct: 321 GSFELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKMKMDIRN---PLLQ 377 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +K YP + + + A + +K+ +EI ++A+++ Sbjct: 378 EIKTRYPHLIKVSSKCAKVLEDYLGQKMPESEIAYIAMHL 417 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 102/219 (46%), Gaps = 16/219 (7%) Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQ--NVLLPNPLL 120 LL + +++ ++++ + L L D+ +I L H AI+R ++ ++ + L Sbjct: 197 LLKLVDKQMIHDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIHIDTATL 256 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM--------SGNMED 172 +++ +E+++ +E I + ++P+DE+G+I MHL+ A+ ++ D Sbjct: 257 AALRK--RREYRMAKELARRITAQFQTEVPEDEIGYITMHLMGARSFYRKGDDEVVSVMD 314 Query: 173 VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQA 232 + ++ R +++ + + + + LV HL R+ H I + L + Sbjct: 315 NFHLVRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRN---PLLEE 371 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ YP+ + A + + + + AE+ ++A+++ Sbjct: 372 MRSAYPELMELAGKAVKPMEQELGEALPEAEVAYIAMHL 410 Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 5/123 (4%) Query: 62 SELLSHIPLEVMATCDRII-SLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNVLLPN 117 E++S + + R I AQ+ G KL D+ +++ L +H +I R + ++ + N Sbjct: 307 DEVVSVMDNFHLVRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRN 366 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 PLL +++ YP+ +L +A+ +++ LG LP+ EV +IAMHL A ++ Sbjct: 367 PLLEEMRSAYPELMELAGKAVKPMEQELGEALPEAEVAYIAMHL-GAALAEPHSASRQHV 425 Query: 178 QLM 180 +++ Sbjct: 426 RVI 428 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 117/284 (41%), Gaps = 25/284 (8%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSHELNGRLSELLSHIPLEV 72 + D ++ EK++ + KR G RI + + +++ + G+ SE L+ E Sbjct: 150 ISADLKEVEKILEAYSLKLAKRPNYGIRIEGTEFNRRLCIANI-IIGKESEALAEGEAEH 208 Query: 73 MATCDRIISLAQERLGK----LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 R+ E + + Y +L H A++R Q+N +P + Sbjct: 209 QENMTRVARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRS 268 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-----------SGNMEDVAGVT 177 KE+++ ++ +++ ++ P E+ +IA+HL Q +G Sbjct: 269 KEYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAGKQSLFLPEQERTGEAGGQVISEETW 328 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 +++ +ML + F +++ + L H+ L+ R+ + + + L + +K + Sbjct: 329 EVVSQMLDAVYEAFLFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKN---PLLKDIKARF 385 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFL----AINIERVRKE 277 P A+ A + + +Y ++ E+ +L A+ IER E Sbjct: 386 PMAYAIALHSSSILTERYGHELKDDEVGYLALAFALAIERQNTE 429 Score = 87.5 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 22/209 (10%) Query: 9 LNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI----EKEYALSSHELNGRLSEL 64 + N V +D++++E++ + ++ ER+N S ++E A + L G+ S Sbjct: 249 IQENCYVPLDEERQERIRRSKEYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAGKQSLF 308 Query: 65 LSHIPLEVMATCDRIISLAQERLGKLQDSIY--------------ISLTDHCQFAIKRFQ 110 L A I E + ++ D++Y ++L H R Q Sbjct: 309 LPEQERTGEAGGQVISEETWEVVSQMLDAVYEAFLFDFRSDLELRMNLAQHIVPLAVRLQ 368 Query: 111 QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM 170 N+ L NPLL DI+ +P + + + +I+ +R G +L DEVG++A+ A N Sbjct: 369 YNMKLKNPLLKDIKARFPMAYAIALHSSSILTERYGHELKDDEVGYLALAFALAIERQNT 428 Query: 171 EDVAGVTQLM----REMLQLIKFQFSLNY 195 E ++ + QL+ +++ + Sbjct: 429 ELPKKNILIVCASGKGSAQLLHYRYRQEF 457 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 100/216 (46%), Gaps = 11/216 (5%) Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL + E + + I + +L L DS YI L H A++R Q+ ++ + Sbjct: 196 RLLGLVDAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMERLQKGDIIHFDDEY 255 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-- 179 Q +E+++ E + +++ + +P+DE+G+I MHL+ A++ N + + + Sbjct: 256 KEQIKDEQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQNYLLEESSMDI 315 Query: 180 ---MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 +E+++ + + +++ + L THLK +R+ + +IN+ + +K++ Sbjct: 316 AYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQMNINN---PMIDEIKKD 372 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 Y + ++ ++ + EI ++ ++ Sbjct: 373 YIELFEVVDKAIQHVFPNL--AFPDEEIGYIVLHFA 406 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 55/123 (44%), Gaps = 5/123 (4%) Query: 56 ELNGRLSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQN 112 +L + LL +++ +I + + LT H + A+ R +Q Sbjct: 299 KLRENQNYLLEESSMDIAYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQ 358 Query: 113 VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 + + NP++ +I++ Y + F++ ++A+ + + P +E+G+I +H + + + + Sbjct: 359 MNINNPMIDEIKKDYIELFEVVDKAIQHVFP--NLAFPDEEIGYIVLHFAATFLQTDSQS 416 Query: 173 VAG 175 Sbjct: 417 NLK 419 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 111/241 (46%), Gaps = 23/241 (9%) Query: 48 KEYALSSHELNGRLSELL---SHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQ 103 KE+ + + L+ ++ ++I+S A+ +L + D +ISL H Sbjct: 175 KEFLYNDYTGRIDYRTLMQLRELFDIDYKQL-EKIVSNAESKLKFRFSDEAFISLVIHVA 233 Query: 104 FAIKRFQ--QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 +I+R + ++V L +L ++++ E+ + ++ I+ + V LP+ E+G+I +H+ Sbjct: 234 ISIERLKHKKDVKLSKAVLNNLKQ--KDEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHI 291 Query: 162 VSAQMSGNM-----------EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLK 210 + +M N E + + +E++ + + SL+ + L+ HL+ Sbjct: 292 IGTKMQQNKIEDVNLELEDEESIELAVIMSKEIINIAERALSLDLSNDKQLLNGLILHLR 351 Query: 211 FLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 R+ ++ + L +K+NYP+ + A ++ +K++ EI ++A++ Sbjct: 352 PTINRLKYGLTLRN---PLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALH 408 Query: 271 I 271 + Sbjct: 409 L 409 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 + EL + E++ +R +SL + L H + I R + + L Sbjct: 309 EDEESIELAVIMSKEIINIAERALSLDLSN----DKQLLNGLILHLRPTINRLKYGLTLR 364 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 NPLL DI+ YP+ + + + +K LG ++ ++E+G+IA+HL +A Sbjct: 365 NPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAA 412 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 9/205 (4%) Query: 74 ATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQL 133 A + A+ +L + + + +L H A+ R + +P + + E++ Sbjct: 4 AIAVCVSEAAEAQLLTINAAAFQNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSEYRA 63 Query: 134 GEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM------SGNMEDVAGVTQLMREMLQLI 187 E+ ID + LP++EV +IA+HL Q ++ V Q++ +ML + Sbjct: 64 AEDIARRIDALTSISLPQEEVAYIAIHLAGKQTIYQTPDESSLVISDEVWQVVSDMLDRV 123 Query: 188 KFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERI 247 F +++ + L H++ LS R+ + + + + +K YP ++ A Sbjct: 124 WRVFRFDFRNDLELRMNLARHIQPLSVRLRYNLKLKN---PMLDDIKARYPLSFSIAVDA 180 Query: 248 AIFIGLQYQRKISPAEIMFLAINIE 272 + I Y +S EI ++A+ E Sbjct: 181 STVIAEAYGAPLSHDEIGYVALAFE 205 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 3/116 (2%) Query: 68 IPLEVMATCDRIISLAQE--RLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I EV ++ R D + ++L H Q R + N+ L NP+L DI+ Sbjct: 108 ISDEVWQVVSDMLDRVWRVFRFDFRNDLELRMNLARHIQPLSVRLRYNLKLKNPMLDDIK 167 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 YP F + +A T+I + G L DE+G++A+ A E V ++ Sbjct: 168 ARYPLSFSIAVDASTVIAEAYGAPLSHDEIGYVALAFELALERSKTETVKKNILVI 223 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 96/216 (44%), Gaps = 11/216 (5%) Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL + + + +R I ++ L + DS YI+L H AI+R Q + Sbjct: 197 KLLGLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAIERIMQGEAIHFDAQH 256 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-- 179 KE++ E+ +++ + +PK+E+G+I MHL+ A++ + + L Sbjct: 257 LQTISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAKLRTHRGYMLEEASLEI 316 Query: 180 ---MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 +E+++ + Q ++ ++ Y+ L+ HLK +RI H I + L + ++ Sbjct: 317 AMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITN---PLLHKIMED 373 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 Y + + +R + + E+ +L ++ Sbjct: 374 YSELFHVVQRGVRHVFS--DMTVPEEEVGYLVLHFA 407 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 5/107 (4%) Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDS--IYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L LE+ +I E++G L D +Y L H + A+ R Q ++ + NPLL Sbjct: 308 MLEEASLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLL 367 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS 167 I Y + F + + + + + V P++EVG++ +H SA + Sbjct: 368 HKIMEDYSELFHVVQRGVRHVFSDMTV--PEEEVGYLVLHFASALLR 412 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 13/250 (5%) Query: 29 RGIGFQKRA--GERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDR------II 80 G+ +KRA G RI + + S + L + L++ + + +I Sbjct: 146 NGLKVEKRASYGIRITGVEVAIRFCFSRYLLVESANPLITDTERNFFSEVNLEMIEQVVI 205 Query: 81 SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTI 140 S + + D +L H A+ R + N + L DI+ P EF+ ++ + Sbjct: 206 SNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTDLEDIEFSIP-EFRAAQDIIKE 264 Query: 141 IDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESL 200 ID G+ P+ E+ ++ +HL S + + ++ +ML IK + +++++ Sbjct: 265 IDLSEGIHFPESEISYLLLHLSSKNRKSDFNNYREYI-IVDKMLTKIKELYGYDFKQDQK 323 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKIS 260 + HLK R+ + +I + + +K NYP A++ + + + K++ Sbjct: 324 MISNIALHLKPAINRMKFNMNIQN---PYLKNLKSNYPLAFELGLVAKDVLEQELKTKVN 380 Query: 261 PAEIMFLAIN 270 AE+ +LAI+ Sbjct: 381 EAEVGYLAIH 390 Score = 69.8 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 57/124 (45%) Query: 39 ERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISL 98 E I+ E Y L R S+ ++ ++ I K + ++ Sbjct: 269 EGIHFPESEISYLLLHLSSKNRKSDFNNYREYIIVDKMLTKIKELYGYDFKQDQKMISNI 328 Query: 99 TDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIA 158 H + AI R + N+ + NP L +++ YP F+LG A ++++ L ++ + EVG++A Sbjct: 329 ALHLKPAINRMKFNMNIQNPYLKNLKSNYPLAFELGLVAKDVLEQELKTKVNEAEVGYLA 388 Query: 159 MHLV 162 +H + Sbjct: 389 IHFL 392 Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 +++ +++ I N +S + L+ H+ R+ ++ ++ +D + ++ + Sbjct: 198 EMIEQVV--ISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTD---LEDIEFSI 252 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 P+ ++ A+ I I L +EI +L +++ Sbjct: 253 PE-FRAAQDIIKEIDLSEGIHFPESEISYLLLHL 285 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 110/222 (49%), Gaps = 16/222 (7%) Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQ--QNVLLPNP 118 + LL+ I ++ + I+S L +E +L DS YI L H AI+R + +N+ + Sbjct: 212 NRLLNFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIKIDPD 271 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV-- 176 +L ++ +L EF++G+ + I+ + +++P DE+G+I MHL A++ N Sbjct: 272 VLEELAKL--PEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNSVSKLEEDI 329 Query: 177 -----TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 ++ + ++++++ + ++ +++ + L HL R+ +I + L Sbjct: 330 ANLDIKRIGKNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRN---PLLN 386 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQR-KISPAEIMFLAINIE 272 +K+ YP + ++ + L + +I +EI ++ ++I Sbjct: 387 NIKEKYPMEYNATKKACEILKLNTKVDEIPDSEIAYITMHIA 428 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHI-PLEVMATCDRIISLAQERLGKL---QDSIY 95 ++ G + + +S+L I L++ I+ + ++ L + + Sbjct: 301 PVDEIGYITMHLKGAKLRLNSVSKLEEDIANLDIKRIGKNIVEVVEKELNIFLKDDERLL 360 Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGV-QLPKDEV 154 LT+H AI R + + + NPLL +I+ YP E+ ++A I+ V ++P E+ Sbjct: 361 KDLTNHLVPAISRLKMKLNIRNPLLNNIKEKYPMEYNATKKACEILKLNTKVDEIPDSEI 420 Query: 155 GFIAMHLVSAQMSGNMEDVAG 175 +I MH+ +A +E+ Sbjct: 421 AYITMHIAAAIYKKGLEEKIK 441 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 19/252 (7%) Query: 39 ERINSSGIEKEYAL--SSHELNGRLSE-LLSHIPLEVMATCDRII-SLAQERLGKLQDSI 94 E + S + + + E +SE LL I LE++ ++ ++ + + D Sbjct: 167 EHLTESKMYRMLSEPLDDWEQTDAISERLLHLINLELVRNIQEVLADFRKQMVEPMADRA 226 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 YI L H AI+R +Q + + + KEF+L + ++++LG+ +P+ EV Sbjct: 227 YIGLIVHLTLAIERIRQGEKIEIDPSYLSKLKMDKEFELAADLARRLEQKLGMNIPEAEV 286 Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQL-----MREMLQLIKFQFSLNYQEESLSYQRLVTHL 209 G++ MH+ A+ E + + ++ ++ ++ + +Q+ SL +Q LV HL Sbjct: 287 GYMTMHIRGAKAHIETESLLEESNFQLGVRVKALIHEVEKSLHVQFQDPSL-FQGLVAHL 345 Query: 210 KFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 K +RI E I + L + +KQ+Y + + + + I E FL + Sbjct: 346 KPALYRIREKMKIYN---PLLEKIKQDYEELFHVVQVKGNKVFE--PITIPEEEAGFLVM 400 Query: 270 N----IERVRKE 277 + +ER++++ Sbjct: 401 HFGSALERLKRK 412 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 4/118 (3%) Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKL--QDSIYISLTDHCQFAIKRFQQNVLLPN 117 LL ++ +I ++ L S++ L H + A+ R ++ + + N Sbjct: 301 ETESLLEESNFQLGVRVKALIHEVEKSLHVQFQDPSLFQGLVAHLKPALYRIREKMKIYN 360 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 PLL I++ Y + F + + + + + +P++E GF+ MH SA + Sbjct: 361 PLLEKIKQDYEELFHVVQVKGNKVFE--PITIPEEEAGFLVMHFGSALERLKRKRTLK 416 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 96/219 (43%), Gaps = 11/219 (5%) Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL+ + ++ + ++ L L DS YI L H A++R + + Sbjct: 208 NRLLNLMDRCIIRKVEATLTKKLSDLDVNLADSAYIGLVVHISLALQRIKNGENITMDKE 267 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA------ 174 + + +EF+L +E + ++ + +P DEVG+I MH+ A+ + A Sbjct: 268 FLKELSITEEFKLAKEIVKGMETDFNMDIPVDEVGYITMHIRGAKQRSSSNHKALNLDDI 327 Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 + ++ +M+ L + +F ++ + + ++ L HL R+ I + L +K Sbjct: 328 EIMEITNKMIDLAEDEFKISLKNDERLFKDLANHLGPSINRLNMGLEIRN---PLLDEIK 384 Query: 235 QNYPQAWQCAERIAIFIGLQYQR-KISPAEIMFLAINIE 272 Y A+ E+I+ I + I +EI ++A++ Sbjct: 385 SKYSYAYDGVEKISRIIKDKLNINSIPESEIGYIAMHFA 423 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYI 96 ++ G + + + + + L+ +E+M +++I LA++ K + ++ Sbjct: 297 PVDEVGYITMHIRGAKQRSSSNHKALNLDDIEIMEITNKMIDLAEDEFKISLKNDERLFK 356 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVG 155 L +H +I R + + NPLL +I+ Y + E+ II +L + +P+ E+G Sbjct: 357 DLANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIG 416 Query: 156 FIAMHLVSAQMSGNMEDVA 174 +IAMH SA M + Sbjct: 417 YIAMHFASAIEKNLMMNTN 435 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 98/248 (39%), Gaps = 17/248 (6%) Query: 37 AGERINSSGIEKEYALSSHELNGRLSELLSHI---PLEVMATCDRIISLAQERLGKLQDS 93 G+ + EY + L+ L ++ D +++ QE L D Sbjct: 162 KGDELKRRFCMAEYVFERKNVAADLTSLQLTAFMKEEQLADIWDILVTTMQENGVTLSDI 221 Query: 94 IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK-EFQLGEEALTIIDKRLGVQLPKD 152 +L H A KR + + D+ + + E+ + ++ + ++ LGV P+ Sbjct: 222 AINNLFIHIVIAFKRIEAGHHIS-LYRKDMSDICSQHEYYVAQKMIARLNTHLGVSFPEM 280 Query: 153 EVGFIAMHLVSAQMSGNMEDVAGVTQ---------LMREMLQLIKFQFSLNYQEESLSYQ 203 E+ +IA+HL+ ++ E + L + +++ ++ + LN + Sbjct: 281 EIAYIAIHLLGTRLVAENEQANDNLKKVFDDEYYKLAKAIVEKVERELDLNIANDQELLV 340 Query: 204 RLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAE 263 L+ HLK R +I + + +KQ+Y A++ A I + I E Sbjct: 341 SLMLHLKPAINRYRYGMNIRN---PMLADIKQHYTLAFEAAVIGQAVIKDKLGISIDENE 397 Query: 264 IMFLAINI 271 I +LA++I Sbjct: 398 IGYLALHI 405 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Query: 30 GIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG- 88 G+ F + I + + + N L ++ E I+ + L Sbjct: 274 GVSFPEMEIAYIAIHLLGTRLVAENEQANDNLKKVFDD---EYYKLAKAIVEKVERELDL 330 Query: 89 --KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLG 146 + +SL H + AI R++ + + NP+L DI++ Y F+ +I +LG Sbjct: 331 NIANDQELLVSLMLHLKPAINRYRYGMNIRNPMLADIKQHYTLAFEAAVIGQAVIKDKLG 390 Query: 147 VQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM----REMLQLIKFQFSLNYQE 197 + + ++E+G++A+H+ +A N + ++ R QL+K++ N+++ Sbjct: 391 ISIDENEIGYLALHIGAALERRNQQKEPKRILIVCASGRGSAQLLKYKLEANFKK 445 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 21/258 (8%) Query: 36 RAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSI 94 + G R+ ++ Y ++ H + + + +P E I+ + G L + Sbjct: 152 KYGLRLTGEEMKLRYCMAEH-VFQKAHANSTLLPEETYQFIQGIVRSRTKASGLYLSEIG 210 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPL--LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKD 152 +L H A KR ++ ++ P L +IQ FQ+ ++ I LG++ P Sbjct: 211 LSNLVTHIAIACKRIEEKKIVMMPETELKEIQV--QPVFQVAQQMAEDIRHVLGIEFPLS 268 Query: 153 EVGFIAMHLVSAQMSGNMED--------VAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 E+ +IA+HL+ A+M + + + ++L ++ SLN Q + Sbjct: 269 EMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVG 328 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEI 264 L HL+ R +I + +K++YP A++ + ++ + +I EI Sbjct: 329 LSLHLRSAIHRFRYGMNIRN---PYLTDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEI 385 Query: 265 MFLAIN----IERVRKEH 278 +LA++ IER + +H Sbjct: 386 GYLALHIGAAIERTKSQH 403 Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 60/122 (49%), Gaps = 3/122 (2%) Query: 62 SELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 L + + ++++ +E + + + + L+ H + AI RF+ + + NP Sbjct: 290 HTLFHLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNP 349 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L DI+R YP F+ G + ++ G+++ +DE+G++A+H+ +A + V Sbjct: 350 YLTDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHIGAAIERTKSQHVKKRCL 409 Query: 179 LM 180 ++ Sbjct: 410 IV 411 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 89/215 (41%), Gaps = 13/215 (6%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQN--VLLPNPLLW 121 LL + + D ++ A+ + + DS + L H A++R QQ + + L Sbjct: 216 LLGLVDPAQIRRIDDAVA-AETQDRNIPDSARVGLVVHLALAVRRLQQGDTIAMDAGTLE 274 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-----MSGNMEDVAGV 176 ++++ +EF + E + + + +P E+G+I MHL+ A+ G D + Sbjct: 275 ELRQT--EEFSVAETIAARMGEVFSISIPAAEIGYITMHLLGARGMTLPSGGGRVDNFRL 332 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 Q+ + +++ + LV HL R+ H I + L +++ Sbjct: 333 VQIAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRN---PLLAQMEEE 389 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +P+ + A + + + E+ ++AI+I Sbjct: 390 HPELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHI 424 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 3/107 (2%) Query: 71 EVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 ++ I+ A E+ G ++ L +H A+ R + ++ + NPLL ++ + Sbjct: 331 RLVQIAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRNPLLAQMEEEH 390 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 P+ ++ A+ ++++ G+ +P DEV +IA+H+ +A + A Sbjct: 391 PELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHIGAALTEAGGDHPA 437 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 114/266 (42%), Gaps = 24/266 (9%) Query: 24 KVVMGRGIGFQKRAGERINS-------SGIEKEYALSSHEL----NGRLSELLSHIPLEV 72 + G+ ++K I+ + +K S+ + N + S + ++ Sbjct: 152 IYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNTMRESNLIKLIENKSSKNIYSLLDTDI 211 Query: 73 MA-TCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYPK 129 M +I+L E++ L DS Y L H AI R N ++ + L DI+ + Sbjct: 212 MKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDIEHD--R 269 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-----NMEDVAGVTQLMREML 184 ++ L + ++K +++P+ EV +I +H+ +++M + + + L+ EM+ Sbjct: 270 DYSLAVIIASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMI 329 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 + S +++ L+ H++ R+ +I + L +K +YP ++ Sbjct: 330 EAYDPDISYILEQDDAFIDGLIAHMQPTLVRLTNGLAIRN---PLLDQIKSDYPDIFKKC 386 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAIN 270 +++ + + K+ +E FLA++ Sbjct: 387 KKVTAMLEEKLNLKVPESETGFLAVH 412 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 14/147 (9%) Query: 41 INSSGIEKEYAL----------SSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKL 90 I IE Y +S+ + + + L + E++ D IS E+ Sbjct: 287 IEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMIEAYDPDISYILEQ---- 342 Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 D+ L H Q + R + + NPLL I+ YP F+ ++ +++++L +++P Sbjct: 343 DDAFIDGLIAHMQPTLVRLTNGLAIRNPLLDQIKSDYPDIFKKCKKVTAMLEEKLNLKVP 402 Query: 151 KDEVGFIAMHLVSAQMSGNMEDVAGVT 177 + E GF+A+H +A + +++ T Sbjct: 403 ESETGFLAVHFGAAVVRLEQNNLSKRT 429 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 4/97 (4%) Query: 176 VTQLMREMLQ-LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 T +M+ ++ LI SY LV H+ RI+ + I + D L + ++ Sbjct: 208 DTDIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEII-EPDSRLDEDIE 266 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + + + A IA + ++ +I E+ ++ ++I Sbjct: 267 HD--RDYSLAVIIASSLEKEFDIEIPEIEVTYICLHI 301 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 30/242 (12%) Query: 55 HELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL 114 H + L LL+ + + + + RL L +S Y +L H A++R ++ + Sbjct: 191 HTRDQNLYALLATDTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLAIAVERVKKGAI 250 Query: 115 LP------NPL-LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFI---------A 158 + N L WD E+ L + I++ + +P E+ +I A Sbjct: 251 VEEDPGLVNKLGTWD-------EYALAGKIRGEIEREFSIHMPDQELSYILLHLLGSKMA 303 Query: 159 MHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE 218 H A+ + + +++ M+ + + + + + + L+ HL+ +R+ E Sbjct: 304 YHETEAENRQFLFPEEDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAMFRMSE 363 Query: 219 HASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERV 274 SI + + +K+ YP+ + + R A I + ++S EI FL+++ +ERV Sbjct: 364 KMSIYN---PVLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHFGAAVERV 420 Query: 275 RK 276 RK Sbjct: 421 RK 422 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 132/297 (44%), Gaps = 36/297 (12%) Query: 2 NMQITK-ILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEK-----------E 49 NM +++ +NN D ++ K++ G I Q + I + G EK E Sbjct: 117 NMFVSRGTINN------DLKEVRKLLEGNNIKLQSEKSKGIKAIGDEKNLRKVVSNLMLE 170 Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKR 108 S + +L + +E + +I A+++L L D + +L H AIKR Sbjct: 171 NVADSDLIGVNFKKLFKDMDIEFI---GNVIKTAEDQLESTLSDYSFNNLLIHIAIAIKR 227 Query: 109 FQ--QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV--SA 164 + +++++ + L ++ + EF + +++ R +++PK E+G++ +HL+ + Sbjct: 228 IELAKDIVMDDNELKNLSKTC--EFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNV 285 Query: 165 QMSGNMEDVAGVTQLMRE-MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN 223 + D QL+ ++ + + N++ + + L+ H++ + +R+ SIN Sbjct: 286 MLKEEKNDDLVYIQLISATLISEVGKRTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSIN 345 Query: 224 DSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRK 276 + L + Y + + E IF+ +IS EI ++ ++ +ER++ Sbjct: 346 N---PLLDEIIYKYKEVFTLVEESLIFLEKDLNAEISKEEIGYITLHFMASLERIKN 399 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 119 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 96/219 (43%), Gaps = 15/219 (6%) Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQN--VLLPNP 118 + LL+ I ++ + +S + + K+ DS +I L H A++R + + + Sbjct: 204 NRLLNLIDKSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETISMEQD 263 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA---- 174 +L +++ + ++F+ + I++ +++P DE+G+I MHL +++ ++ Sbjct: 264 VLNELKSI--EQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKLRLETKNHNFSLD 321 Query: 175 --GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQA 232 + + + +++L +F ++ + LV H+ RI I + L Sbjct: 322 DVELMNIAKRLIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRIKMGMDIRN---PLLNQ 378 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRK-ISPAEIMFLAIN 270 +K Y + I I + I +EI +LA++ Sbjct: 379 IKTEYKDIYDGVANIIYIIKEKLDIDNIPESEIAYLAMH 417 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 4/139 (2%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYI 96 I+ G + S + S +E+M R+I LA + G + Sbjct: 293 PIDEIGYITMHLRGSKLRLETKNHNFSLDDVELMNIAKRLIELATDEFGFDFSTDKKLLN 352 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVG 155 L +H ++ R + + + NPLL I+ Y + + II ++L + +P+ E+ Sbjct: 353 DLVNHMAPSLCRIKMGMDIRNPLLNQIKTEYKDIYDGVANIIYIIKEKLDIDNIPESEIA 412 Query: 156 FIAMHLVSAQMSGNMEDVA 174 ++AMH S +E+V Sbjct: 413 YLAMHFGSCMERNLIEEVE 431 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 57/133 (42%), Gaps = 12/133 (9%) Query: 148 QLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM----REMLQLIKFQF-----SLNYQEE 198 + E+ I ++ + N+ +++ +L+ + +++ ++ +N + Sbjct: 175 SFEEQELIDIVKNVGNNIQKHNVIEISSENRLLNLIDKSIIKKVENSLSETIKDINLKIS 234 Query: 199 SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRK 258 ++ LV H+ R+ +I+ + L + + ++ A +IA I ++ K Sbjct: 235 DSAFIGLVVHISLAVQRLRNGETISMEQDVLNEL---KSIEQFKTATKIAQQIEEEFDIK 291 Query: 259 ISPAEIMFLAINI 271 + EI ++ +++ Sbjct: 292 VPIDEIGYITMHL 304 >UniRef50_A8R873 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R873_9FIRM Length = 162 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIK 188 + +Q+G+ A+ I++ L V LPKDE IA HL+ A + + + + ++ + Sbjct: 4 ESYQVGKCAIQYINETLHVDLPKDEATSIAFHLIVASQEKTNIETRELLEGVNSIVNITM 63 Query: 189 FQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--LQQAVKQNYPQAWQCAER 246 E+SL+Y R + HLKF RI+ H + N S E + + Y +C Sbjct: 64 KYLGNQIDEDSLAYSRYIIHLKFFLSRIVSHQTSNGSIEVTNIFGQLVTKYEGVDRCIHE 123 Query: 247 IAIFIGLQYQRKISPAEIMFLAINIERVRK 276 I+ FI ++ + + + ++L I+I R+ + Sbjct: 124 ISEFINGKFNYRCTDEDCIYLMIHIVRLYE 153 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 17/260 (6%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII-SLAQERLGK 89 GF+ R E + + L+E +P E + I + Sbjct: 148 YGFKLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKKMKNDRIP 207 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQR-LYPKEFQLGEEALTIIDKRLGVQ 148 L + +L H A KR + + D+ L+ KE+Q E + ++ +L V Sbjct: 208 LSNMGLNNLIIHIAIACKRIRTENYVS-LFPKDMDHILHQKEYQAAEAIVKELESKLSVT 266 Query: 149 LPKDEVGFIAMHLV-------SAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLS 201 PKDE +I MHL+ S QL M++ + + L + Sbjct: 267 FPKDETAYITMHLLGTKRMTQSQCGEDTFSIEEETDQLTLAMIKAVDRELKLGILHDKEL 326 Query: 202 YQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISP 261 L H+K R ++ + + A+K++YP A++ I I Q +I Sbjct: 327 KIGLALHMKPAISRNRYGMNLRN---PMLAAIKEHYPLAFEAGIIAGIVIKEQTGIEIHE 383 Query: 262 AEIMFLAIN----IERVRKE 277 EI +LA++ IER + E Sbjct: 384 NEIGYLALHFGAAIERKKTE 403 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 11/140 (7%) Query: 68 IPLEVMATCDRIISLA--QERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I E +I + +LG L D + I L H + AI R + + L NP+L I+ Sbjct: 297 IEEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAIK 356 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM---- 180 YP F+ G A +I ++ G+++ ++E+G++A+H +A E ++ Sbjct: 357 EHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIVCASG 416 Query: 181 ----REMLQLIKFQFSLNYQ 196 + + + ++ F Sbjct: 417 AGSAQLLREKLRSHFGKRLD 436 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 15/208 (7%) Query: 80 ISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP-NPLLWDIQRLYPKEFQLGEEAL 138 + ++ KL D + ++ H AIKR Q + +P ++ + E+Q E + Sbjct: 198 LDTCRKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQEANLAQE--VEYQSALEIV 255 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-----AGVTQLMREMLQLIKFQFSL 193 I +++G+ LP +E +IA+HL + +S + + V Q + +LQ I + Sbjct: 256 EKIRQQMGIVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQQLLVVLQKIDQETGF 315 Query: 194 NYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGL 253 E+ L L+ H+ L R+ S+ + L + +K++Y +Q R + Sbjct: 316 CLAEDPLLIDGLMMHITPLLQRLNNGTSMEN---PLLETIKKDYSDFFQLTIRHFSDVPF 372 Query: 254 QYQRKISPAEIMFLAINI----ERVRKE 277 K++ E+ +L I++ ER+ + Sbjct: 373 FAPYKVTEGELAYLTIHLTAAMERLANQ 400 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 29/278 (10%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSHELNGRLSELLSHIPLEV 72 + D +Q E+ + G+ +R+ G ++ S + K L+S + G EL L V Sbjct: 122 ISNDLKQVEERLAQFGLAIDRRSHHGIKVIGSEMAKRLCLASLAMEGS-DELKGAARLSV 180 Query: 73 MATCDRII---------SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNP--LLW 121 A R + + E + Y +L H A+ R ++ +P L Sbjct: 181 DAEAYRALFDVVSDCVDDVTTEERFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLT 240 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME---------- 171 +I++ F + I R GV LP +EV +IA+HL ++ G+ + Sbjct: 241 EIRK--SPSFPIARRISDSIGARTGVVLPDEEVAYIAIHLTGKRLLGDFDAGDDQEAGLV 298 Query: 172 DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 V + ML + F + + + L HL L R+ H + D + Sbjct: 299 ISDEVWDAVTGMLDAVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHL---DNPILG 355 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 +K +P A+ A + Y+ ++S EI ++A+ Sbjct: 356 DIKSRFPLAYSMAVEAGSSLAAHYEAELSEEEIGYIAL 393 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 39/88 (44%) Query: 93 SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKD 152 + ++L H R ++ L NP+L DI+ +P + + EA + + +L ++ Sbjct: 327 ELRMNLARHLVPLEVRLHHHLHLDNPILGDIKSRFPLAYSMAVEAGSSLAAHYEAELSEE 386 Query: 153 EVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 E+G+IA+ A + ++ Sbjct: 387 EIGYIALSFALALERQKTDAPKKRILVV 414 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Query: 194 NYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGL 253 + S++Y+ L+TH+ RI E + E L + K ++ A RI+ IG Sbjct: 204 RFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLTEIRKSP---SFPIARRISDSIGA 260 Query: 254 QYQRKISPAEIMFLAINI--ERVRKE 277 + + E+ ++AI++ +R+ + Sbjct: 261 RTGVVLPDEEVAYIAIHLTGKRLLGD 286 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 99/238 (41%), Gaps = 23/238 (9%) Query: 51 ALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQ 110 + N + L I +V+ + E L ++ YI L H AI+R Sbjct: 195 YFQNLGKNSNMDLLNEEILDKVIKILKKCED---EFLSRITRHSYIGLVIHLVIAIERLL 251 Query: 111 QNVLLPNPLLWDIQRLYPKE--FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 + + ++ R ++ ++ +E ++ +++P+ E ++ MHL A+M Sbjct: 252 SGKTIT--MEEELLRALKEDPYYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKY 309 Query: 169 NMEDVAGVTQLMRE---------MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEH 219 +E +T+++ E ++ ++ ++ + YQ L +HL+ R+ H Sbjct: 310 AVEKQDELTKMLDEYDCMIVADDLIAAFGRLMGDDFSQDKVLYQGLASHLRATLHRLNYH 369 Query: 220 ASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IER 273 + + L +K+++ + + + + +Y +++ EI +L+ + IER Sbjct: 370 MRLEN---PLLDQIKEDFRDIFAICKSVCKVMETKYHLEVNEDEIAYLSFHFGAAIER 424 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 21/263 (7%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII-SLAQERLGK 89 GF+ R E + + LSE +P + + I + Sbjct: 148 YGFKLRGEELRLRYCMAEYLVDDREPEPDLLSEKAGILPKDDIHVIRTAIMKQVRNHKIP 207 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYPKEFQLGEEALTIIDKRLGV 147 L +L H A KR + + L DI+ E+Q E + ++ L V Sbjct: 208 LSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLE--TEYQSAEAIVKELESALSV 265 Query: 148 QLPKDEVGFIAMHLVS-AQMSGNMEDVAGVTQLM--------REMLQLIKFQFSLNYQEE 198 P+ E +IA+HL+ +M+ + + +T+L+ M++ I+ + L ++ Sbjct: 266 TFPEQETAYIAIHLLGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEAIERELKLGITDD 325 Query: 199 SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRK 258 + L H+K R ++ + + A+K+NYP A++ I I Q Sbjct: 326 NELKAGLALHIKPAINRNRYGMNLRN---PMLSAIKENYPLAFEAGVIAGIVIKEQTGID 382 Query: 259 ISPAEIMFLAIN----IERVRKE 277 I EI +LA++ IER + E Sbjct: 383 IHENEIGYLALHFGAAIERRKTE 405 Score = 88.3 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%) Query: 62 SELLSHIPLEVMATCDRIISLAQE--RLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNP 118 EL I E + +I + +LG D+ + L H + AI R + + L NP Sbjct: 293 KELTRLIDGETSRLTEAMIEAIERELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNP 352 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 +L I+ YP F+ G A +I ++ G+ + ++E+G++A+H +A E Sbjct: 353 MLSAIKENYPLAFEAGVIAGIVIKEQTGIDIHENEIGYLALHFGAAIERRKTERPPKRCL 412 Query: 179 LM 180 ++ Sbjct: 413 IV 414 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 11/208 (5%) Query: 77 DRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEE 136 +I + + + D +L H A KR + + PL + + Y E ++ +E Sbjct: 185 QILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIE-PLPFHFKESYTFERKVAKE 243 Query: 137 ALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM---EDVAGVTQLMREMLQLIKFQFSL 193 ++K +G+ P E+ +I +HL+ ++ + + ++ +L +K QF Sbjct: 244 ITGEVEKSVGIPFPPAEIDYILVHLLGTKLISKHVARQVSDEIDDIVNAILHELKTQFRW 303 Query: 194 NYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGL 253 ++ + L HL R+ I + L +K +P A++ A I Sbjct: 304 DFSNDKEFRNGLTLHLHTSLNRMKYKMHIRN---PLLNEMKTKFPIAFEGAVAAGECIEA 360 Query: 254 QYQRKISPAEIMFLAINI----ERVRKE 277 +K++ EI +LAI+I ER+RK+ Sbjct: 361 VIHKKVNEDEISYLAIHIAIALERMRKK 388 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 101/232 (43%), Gaps = 21/232 (9%) Query: 57 LNGRLSELLSHIPLEV-MATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQN-- 112 L+ + +L+ + + ++ I E L L D ISLT H AIKR ++ Sbjct: 177 LDSKQLKLIEDVLKPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHR 236 Query: 113 VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN--- 169 + + L ++Q+ E++L E+ I++ + V++PK E+G+I +HL+ A++ + Sbjct: 237 IHIDTNQLQELQK--KPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQVH 294 Query: 170 ---------MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA 220 + Q+++E++ I +++ L H R+ Sbjct: 295 EKEDIEQLLTKMDYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGL 354 Query: 221 SINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 ++ + L + +KQ Y +++ + I + I EI ++ ++I+ Sbjct: 355 AVKN---PLLKDIKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQ 403 Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 7/146 (4%) Query: 57 LNGRLSELLSHIPLEVMATCDRII---SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNV 113 + +LL+ + E + +I SL + + + + LT H + R + + Sbjct: 295 EKEDIEQLLTKMDYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGL 354 Query: 114 LLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 + NPLL DI+++Y F++ + I+K+ V +P+DE+ +I +H+ +A ++ Sbjct: 355 AVKNPLLKDIKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAALERMQNKNE 414 Query: 174 AGVTQLM----REMLQLIKFQFSLNY 195 T ++ +LI+ + S + Sbjct: 415 KIRTIIVCATGSGTSRLIEAKLSTTF 440 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 14/216 (6%) Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLL 120 L + + R+IS ++ LG L D + LT ++R Q Q V + + Sbjct: 186 LFPPMEEGGLEQVYRLISDSEITLGVDLTDEMLFHLTARFLLYVRRIQTAQWVSIDDDER 245 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA------QMSGNMEDVA 174 ++R E++ + + GV +P DEV + AMHL+ A QM+G+ E + Sbjct: 246 SVLRRT--PEYEAAARIAEGLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQMTGSEEVLK 303 Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 + + EM + + + L+ HLK +RIL S+ + L + ++ Sbjct: 304 QLRNVTTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLSLEN---PLLENIR 360 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN 270 Y + ++ R A RK+ EI +LA++ Sbjct: 361 SKYGEVFELTRRSAAPFEQLVGRKLDDHEIGYLAMH 396 Score = 64.0 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 +L H + A R + L NPLL +I+ Y + F+L + ++ +G +L E+G+ Sbjct: 333 NLLVHLKPAYYRILYGLSLENPLLENIRSKYGEVFELTRRSAAPFEQLVGRKLDDHEIGY 392 Query: 157 IAMHLVSAQMSGNMEDVAGVTQLM 180 +AMH N + + Sbjct: 393 LAMHFGGWLRRENTKPAVRRQAAI 416 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 100/233 (42%), Gaps = 17/233 (7%) Query: 58 NGRLSELLSHIPLEVMATCDRII---SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL 114 + + ++ + L+ + D I ++ KL D + +L H ++R + Sbjct: 179 DDSMYAIVDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYP 238 Query: 115 LPN-PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 L + I++ E+Q+ L +++ +G++ PK+E +IA+HL Sbjct: 239 LAFFSIPAAIRQ--SDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVDGSPQD 296 Query: 174 AGVTQLMREMLQ--LIKFQ--FSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 L+R L+ ++K ++ + +S Q L+ H+K L+ R+ H + + L Sbjct: 297 NKADDLLRSHLKAGIVKASQLTGMSLEADSSLLQGLLAHMKPLATRLENHIQLTN---PL 353 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKEH 278 + +K YP+A+ ++ I +S E +++++ IER H Sbjct: 354 TEEIKSKYPEAFALTKQAFENIPELQAYDLSDDEWAYISLHVMAAIERYSNRH 406 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 11/129 (8%) Query: 151 KDEVG--FIAMHLVSAQMSGNMEDVAGVTQL----MREMLQLIKFQ-FSLNYQEESLSYQ 203 K+E FI + + +M + T L ++ ++ + + Sbjct: 161 KEEAIRHFIMDYFFATSFDDSMYAIVDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMH 220 Query: 204 RLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAE 263 LV H+ + RI + A++Q+ +Q A RI + + E Sbjct: 221 NLVLHIALMVQRIRSGYPLAFFSIP--AAIRQS--DEYQVALRILYRVEEVMGIRFPKEE 276 Query: 264 IMFLAINIE 272 ++A++++ Sbjct: 277 ANYIALHLK 285 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 14/211 (6%) Query: 79 IISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEAL 138 I+ + L D +L H A+KR + + + + KE+ + ++ + Sbjct: 207 ILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQSELIIKKEYTIAKQIV 266 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-------MREMLQLIKFQF 191 ++K L + PK+EV ++ MHL+S ++ L M+ +L + + Sbjct: 267 GELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVAEER 326 Query: 192 SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFI 251 +L + + HLK L R+ + + L VK+NYP A++ A + I Sbjct: 327 NLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRN---PLLAEVKKNYPYAFEIAVLVGDII 383 Query: 252 GLQYQRKISPAEIMFLAINI----ERVRKEH 278 G I +EI ++AI+ R+++++ Sbjct: 384 GEYTGESIPESEIGYIAIHFGGAMSRLQEQN 414 Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 53/128 (41%) Query: 53 SSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQN 112 +S + + ELL M ++ + + + + H + + R + Sbjct: 295 TSKDRYENVEELLGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYK 354 Query: 113 VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 + NPLL ++++ YP F++ II + G +P+ E+G+IA+H A ++ Sbjct: 355 LNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQN 414 Query: 173 VAGVTQLM 180 L+ Sbjct: 415 QKKRCLLV 422 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 12/206 (5%) Query: 71 EVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 E++ + L ++ L DS YI+L H +AI+R + + + + KE Sbjct: 200 ELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNELEELMNAKE 259 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-----MREMLQ 185 + E +++ GV +P+ EVG+I +HL SA E A +L + ++ Sbjct: 260 YSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKTEYKAQEIELETALQTKRLIA 319 Query: 186 LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAE 245 I + ++ + Y+ L+ HL+ RI E+ I + +++ +K++Y + Sbjct: 320 FISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYN---PMKEQIKRDYFLLY---M 373 Query: 246 RIAIFIGLQY-QRKISPAEIMFLAIN 270 I + + S EI F+ ++ Sbjct: 374 AIEEGVEKYFPGMSFSDDEIAFIVLH 399 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 66 SHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 I LE R+I+ +++ S+Y L H + A+ R ++N+ + NP+ Sbjct: 304 QEIELETALQTKRLIAFISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYNPMKEQ 363 Query: 123 IQRLYPKEFQLGEEALTIIDKRL-GVQLPKDEVGFIAMHLVSA 164 I+R Y + EE + +K G+ DE+ FI +H SA Sbjct: 364 IKRDYFLLYMAIEEGV---EKYFPGMSFSDDEIAFIVLHFGSA 403 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 M +L +K + + + + S Y LV HL + RI +I L++ + Sbjct: 204 MERILFQLKEKIAFSLSDSS--YIALVVHLTYAIERIKLGETITMEQNELEELMNAK--- 258 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + A IA + + I AE+ ++ I++ Sbjct: 259 EYSSALEIAGELERAFGVTIPEAEVGYITIHL 290 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 7/198 (3%) Query: 74 ATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQL 133 D ++ + ++ D + +L H +I+R Q + + NP + R Y E + Sbjct: 187 TISDIVVDSLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNP---QMARQYGHEHVI 243 Query: 134 GEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLMREMLQLIKFQFS 192 ++ L + + ++E+ F+A+HL+ + N + + ML+ IK + Sbjct: 244 AKKILDELASIYHFIITENEISFLAIHLLGKRSYEENDLISKEIDYFVNGMLEEIKIKTD 303 Query: 193 LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 +++ + L HL L R+ + ++ + Q ++ NYP A+ A A +I Sbjct: 304 IDFYGDVELKISLALHLVPLLVRLESQMQLQNT---MIQDIQANYPLAYDVAVIAASYIS 360 Query: 253 LQYQRKISPAEIMFLAIN 270 Q ++S E+ +LA++ Sbjct: 361 EQKHYQLSSDEVGYLAVH 378 Score = 64.0 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 41/220 (18%) Query: 59 GRLSELLSHIPLEVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQNVLL 115 R E I E+ + ++ + + + ISL H + R + + L Sbjct: 274 KRSYEENDLISKEIDYFVNGMLEEIKIKTDIDFYGDVELKISLALHLVPLLVRLESQMQL 333 Query: 116 PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL-------------- 161 N ++ DIQ YP + + A + I ++ QL DEVG++A+H Sbjct: 334 QNTMIQDIQANYPLAYDVAVIAASYISEQKHYQLSSDEVGYLAVHFSLSLSKKENKINPK 393 Query: 162 -----VSAQMSGNMEDVAGVTQLMREMLQLIK-----FQFSLNYQEESLSYQRLVTH--- 208 +A+ + + EM+ ++ N + + + H Sbjct: 394 KVLIICNARRGDYLMIQHTFLKEFNEMISDLEIINALEIPQYNLDDYDCIFATFLNHPLI 453 Query: 209 ------LKFL-----SWRILEHASINDSDESLQQAVKQNY 237 + F RI L + K+ Y Sbjct: 454 PKRALRINFFIDQKDIQRIKNSLQGQSEAGELLKYFKEEY 493 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Query: 186 LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAE 245 ++ Y+ + Q LV H+ R+ I++ + + Y A+ Sbjct: 192 VVDSLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNP------QMARQYGHEHVIAK 245 Query: 246 RIAIFIGLQYQRKISPAEIMFLAINI 271 +I + Y I+ EI FLAI++ Sbjct: 246 KILDELASIYHFIITENEISFLAIHL 271 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 34/290 (11%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEK------------EYALSSHELNGRLS 62 V D + E+ + GI K+ I G EK +N L Sbjct: 123 VAKDILKVEEFLGKYGIKLYKKPKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDSLK 182 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL + + RII ++E+ L D + L H +IKR + + L Sbjct: 183 DLLKDVD---LNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKD 239 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ--- 178 KE+++ ++ I+KR V + E+G+I MHL+ A++ ++E Sbjct: 240 LNLLKKEKEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLK 299 Query: 179 --------LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 +++ ++ I + + L HLK R+ + D Sbjct: 300 RLDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKL---DNPFL 356 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRK 276 + +K+ A++ + + Y+ ++ EI ++AI+ IER++ Sbjct: 357 EEIKKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKS 406 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 24/179 (13%) Query: 5 ITKILNNNVVVVIDDQQREKV---VMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K N VV+DD + + +MG + I + + Y L+ +L Sbjct: 259 IEKRFN----VVVDDTEIGYITMHLMG------AKLQNDIETEKFSENYL---KRLDCKL 305 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L I ++ ++ + + L H + I R + V L NP L Sbjct: 306 YIILKSIVNDIAEMTGYKFYNDKK--------LLVGLFLHLKPTINRLKNGVKLDNPFLE 357 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I++ F++ + + + + +DE+G++A+H ++ D T ++ Sbjct: 358 EIKKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKSVDRNKKTAVI 416 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 86/210 (40%), Gaps = 12/210 (5%) Query: 69 PLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 E + IS ++ L K DS Y+SL H A+KR ++ + Q Sbjct: 209 DEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKILMSDEQLEQLKN 268 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-----SGNMEDVAGVTQLMRE 182 E+ + + ++ + +P +E+G+I +HL+ A+ + + E V +++ Sbjct: 269 EDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMGARRFFILANDDKELREVVIKIIDN 328 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + +++ Y ++ + L HLK R+ I + + +K Y + Sbjct: 329 VQKILNKSIDNKYIDD--LIKDLTVHLKPAISRLKNSLMIEN---PILGTIKGKYMDIFS 383 Query: 243 CAERIAIFIGLQYQRK-ISPAEIMFLAINI 271 E+ I +Y + I EI ++ ++I Sbjct: 384 AVEKSCFIIKEKYYIENIPDDEIAYITMHI 413 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYIS-----LTDHCQFAIKRFQQNVLLPNP 118 +L++ E+ +II Q+ L K D+ YI LT H + AI R + ++++ NP Sbjct: 310 ILANDDKELREVVIKIIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIENP 369 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVGFIAMHLVSAQMSG 168 +L I+ Y F E++ II ++ ++ +P DE+ +I MH+ ++ Sbjct: 370 ILGTIKGKYMDIFSAVEKSCFIIKEKYYIENIPDDEIAYITMHIGASLEKS 420 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 89/203 (43%), Gaps = 4/203 (1%) Query: 69 PLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 + I+ +E K+ D I +L+ H IKR ++ + L + + Sbjct: 195 DISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFEIKE-LGIEQEVSDR 253 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIK 188 E+Q+ + + I+ V P++E+ ++ +HL++ ++ +++ + ++L+ + Sbjct: 254 VEYQVAQRIVQRIEVIADVSFPQEEIAYLTLHLMAKSNHRENKNDQELSKEVVKVLKRLS 313 Query: 189 FQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIA 248 +F + E+ + L+ HL + R+ I + L + +K+ P+ ++ + Sbjct: 314 QEFRFSLIEDHQLFNGLLDHLSPMMIRLSRGIRIEN---PLTEEIKKENPKVFEAVKTHF 370 Query: 249 IFIGLQYQRKISPAEIMFLAINI 271 + I+ E +LA+++ Sbjct: 371 SNMPALKNYTINEDEWAYLALHL 393 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 52 LSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDS-IYISLTDHCQFAIKRFQ 110 S+H N EL + + + R ++D ++ L DH + R Sbjct: 289 KSNHRENKNDQELSKEVVKVLKRLSQ------EFRFSLIEDHQLFNGLLDHLSPMMIRLS 342 Query: 111 QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 + + + NPL +I++ PK F+ + + + + +DE ++A+HL++A Sbjct: 343 RGIRIENPLTEEIKKENPKVFEAVKTHFSNMPALKNYTINEDEWAYLALHLMAALEKE 400 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 13/209 (6%) Query: 67 HIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLL--PNPLLWDI 123 +I V+ R++ A E+LG L + SL H AI R + + + L+ +I Sbjct: 195 NIDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNPIGQNDDLIRNI 254 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 E + +++K + V+LP +E+ +I +HL++A + + E Sbjct: 255 GNERKSE---AVQLAAMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQHSMIPIPER 311 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 L+ + F + L H++ R+ +A I++ + +K+NYPQA+ Sbjct: 312 LKELLHPFGYDRD----LLFGLTVHMQAAVKRLRVNAGISN---PYTEDIKRNYPQAFDE 364 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINIE 272 A ++ ++ E+ ++A++IE Sbjct: 365 ALIVSDDYERTEHISMNDDEVAYVALHIE 393 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 14/114 (12%) Query: 62 SELLSHIPLEVMATCDRIISLAQ--------ERLGKL------QDSIYISLTDHCQFAIK 107 E +++I + ++A +SLA ERL +L + LT H Q A+K Sbjct: 279 DEEIAYIQIHLIAASANQVSLANQHSMIPIPERLKELLHPFGYDRDLLFGLTVHMQAAVK 338 Query: 108 RFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 R + N + NP DI+R YP+ F ++ + + DEV ++A+H+ Sbjct: 339 RLRVNAGISNPYTEDIKRNYPQAFDEALIVSDDYERTEHISMNDDEVAYVALHI 392 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 14/242 (5%) Query: 46 IEKEYALSSHELNGRLSEL-LSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQF 104 IE + ++ +L +S P+ + ++ +E KL D + +L H Sbjct: 167 IEFFFHDKFFQILHNYIKLEVSGRPISLEELTIIVLDECREGQLKLSDFVIQNLVIHIAL 226 Query: 105 AIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 ++KR + + W + Y +E ++ E+ L + G++ PK+EV +I +HLVS Sbjct: 227 SLKRIGEGFQIKQLDSWSM-DEYREEGKIAEKILKRVYHSTGLKFPKEEVDYITLHLVSK 285 Query: 165 -QMSGNMEDVAGVTQLMREMLQLI----KFQFSLNYQEESLSYQRLVTHLKFLSWRILEH 219 + N + V Q +R+ L + F ++ + + LV HL L R+ H Sbjct: 286 GNLQTNKCEKEDVAQQIRKQLLFVLEQSNFTHEYPFKNDFQLIEGLVAHLSTLFVRLKNH 345 Query: 220 ASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVR 275 + D L ++ +Y + I + + K+S E+ ++A++ +ER++ Sbjct: 346 VKM---DNPLLAEIQNHYAGVLEMTGNILSAMPIFANEKLSADEVAYVALHFMTSLERLK 402 Query: 276 KE 277 ++ Sbjct: 403 EK 404 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 15/207 (7%) Query: 77 DRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP-NPLLWDIQRLYP--KEFQL 133 + II L D +L H A+ R + + N + + K + + Sbjct: 199 NIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDMKDTKAYFV 258 Query: 134 GEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE---------ML 184 E+ + +K+L + PK E ++A+HL+ +M G+ + + + + L Sbjct: 259 AEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKLIMLSL 318 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 + I+ + L +++ L HLK R +I + + +K+NYP A+Q A Sbjct: 319 EKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRN---PMLTHIKKNYPLAFQAA 375 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAINI 271 + I + I EI +LA++I Sbjct: 376 VYAGVVIEEKTDITIDENEIGYLALHI 402 Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 3/116 (2%) Query: 68 IPLEVMATCDRIISLAQER--LGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 + + + +E LG QD + ISL H + A+ R++ + + NP+L I+ Sbjct: 306 LDPSIYKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIK 365 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + YP FQ A +I+++ + + ++E+G++A+H+ +A + ++ Sbjct: 366 KNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLVV 421 >UniRef50_Q5WDQ4 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDQ4_BACSK Length = 109 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+ NN+VV+ ++ +E VVMGRG+ FQK+AGE I+++ IEK + L ++ +L+ Sbjct: 1 MQIKKVFNNHVVLAQNEWDQEMVVMGRGLAFQKKAGETIDTAKIEKTFVLEKRGVSDKLA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIK 107 +LL + +I+ A+ +L KL +Y+ L DH FAIK Sbjct: 61 KLLRDTSELYLNIASKILDYAKSQLSYKLDGYLYVDLADHMSFAIK 106 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 12/205 (5%) Query: 79 IISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEAL 138 II L S L H AI+R +N P+ + + ++ + + + Sbjct: 192 IIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRHTNQYAIASKMI 251 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-----AGVTQLMREMLQLIKFQFSL 193 +++ V P+ E+ FI +HL+ ++M+ + ++Q + E++ + + + Sbjct: 252 ENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGI 311 Query: 194 NYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGL 253 + +++ + L+TH+K RI + L+Q V + YPQ + + I Sbjct: 312 DMSKDNKLHTSLITHIKPAIHRIKYDMLQPN---PLRQEVMRRYPQIIEAVSKHISPIEQ 368 Query: 254 QYQRKISPAEIMFLAIN----IERV 274 + + E+ ++ I+ IERV Sbjct: 369 DAAIRFNEDELTYITIHFASSIERV 393 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 59/118 (50%), Gaps = 12/118 (10%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRF 109 H+L+ + EL++ + E+ I +++ + ++ SL H + AI R Sbjct: 287 ITFEYHDLSQNIHELITCVSQEL------GIDMSK------DNKLHTSLITHIKPAIHRI 334 Query: 110 QQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS 167 + ++L PNPL ++ R YP+ + + ++ I++ ++ +DE+ +I +H S+ Sbjct: 335 KYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIER 392 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 97/237 (40%), Gaps = 14/237 (5%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRF 109 Y L S +LL I L V+ + + + D Y+ L H A+ R Sbjct: 182 YRLKSELGEQASEKLLYLIDLNVILKVLETLHELRRDGEPIADVSYVGLAVHLSLAVDRI 241 Query: 110 QQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 ++ + + L E++ + + +++ + +P+ EV ++AMHL+ A+ + Sbjct: 242 KRGEKIEKHSEGFEKVLKTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLGAKQGDD 301 Query: 170 MEDVAGVTQL-----MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND 224 T L +++++ + + + + + L++HLK +R+ + I + Sbjct: 302 GSFFFQETSLDIAMRAKKLIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQGMKIYN 361 Query: 225 SDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKE 277 S+ A+K+ Y + + + + EI +L ++ IER +K+ Sbjct: 362 ---SMLPAIKEGYAPLFNTIKE--CVVEIFPTWSFPDEEIGYLVMHFGSAIERSKKK 413 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 7/152 (4%) Query: 64 LLSHIPLEVMATCDRIISLA--QERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L++ ++I + + + D S+ L H + A+ R +Q + + N +L Sbjct: 305 FFQETSLDIAMRAKKLIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQGMKIYNSML 364 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 I+ Y F +E + I P +E+G++ MH SA + V + Sbjct: 365 PAIKEGYAPLFNTIKECVVEIFPTW--SFPDEEIGYLVMHFGSAIERSKKKAVIKAIVIC 422 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFL 212 + + ++E Q +TH+ Sbjct: 423 SSGIGT-SKLLATRLEKEIPEIQG-ITHMSAF 452 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 8/207 (3%) Query: 68 IPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 +P+ ++ + + KL D + +L H AI R + + + + + Sbjct: 189 LPISFEELTIIVLDECRSQSLKLSDFVIQNLIVHIALAISRVNDGFKISQLSIDE--KKF 246 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL---MREML 184 E + L ++ G P +E+ +IA+HL+S + + + L + E Sbjct: 247 KTEILVATNILRRVEYVTGTDFPTEEINYIALHLISESIHTDNSESLERISLRQDLSEAA 306 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 I + + ++ + L+ HL+ L R+ + + D L ++ Y +A+ + Sbjct: 307 AEIDLHYGYQFAQDFTFIEGLLKHLEVLLERVKNNVRL---DNPLLDDIQSQYKEAFVIS 363 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAINI 271 + + + +S EI ++ +++ Sbjct: 364 RSLMSHLNYFKEFHLSDDEIAYVTLHL 390 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 37/71 (52%) Query: 93 SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKD 152 + L H + ++R + NV L NPLL DIQ Y + F + ++ ++ L D Sbjct: 322 TFIEGLLKHLEVLLERVKNNVRLDNPLLDDIQSQYKEAFVISRSLMSHLNYFKEFHLSDD 381 Query: 153 EVGFIAMHLVS 163 E+ ++ +HL++ Sbjct: 382 EIAYVTLHLLA 392 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 98/245 (40%), Gaps = 15/245 (6%) Query: 38 GERINSSGIEKEYALSSHELNGRLSELLSH-----IPLEVMATCDRII-SLAQERLGKLQ 91 G ++ K LS+ L L I E+ +I + ++ Sbjct: 154 GSKVEGDEYMKRLCLSNLLLERNQEAFLKEDCLQLIDPELFKKIKEVIVQKVNKYKIEIS 213 Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPK 151 D +L H A +R Q+ ++ L + +P E + E + ++ + P+ Sbjct: 214 DISLENLATHIAIACRRIQEGFVIEE-LADVLVDDHPFEKIVANEIIKEVEDFTSLTFPE 272 Query: 152 DEVGFIAMHLVSAQMSGNMEDVA-----GVTQLMREMLQLIKFQFSLNYQEESLSYQRLV 206 E+ +I +HL+ ++ E ++ ML +K + + +++++ Q L Sbjct: 273 TEIDYIIVHLLGTKLLHKKELAEFSKFDEAGTIINCMLARLKAELNWDFRQDREFIQALT 332 Query: 207 THLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMF 266 H++ R+ +I + L +K+ YP A++ A + I + ++ EI + Sbjct: 333 LHIRPAMNRLRYKMNIRN---PLLNDIKKKYPAAFEGAIIASKCIEEYLRMEVVEDEIAY 389 Query: 267 LAINI 271 +A++I Sbjct: 390 IALHI 394 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 42/72 (58%) Query: 93 SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKD 152 +LT H + A+ R + + + NPLL DI++ YP F+ A I++ L +++ +D Sbjct: 326 EFIQALTLHIRPAMNRLRYKMNIRNPLLNDIKKKYPAAFEGAIIASKCIEEYLRMEVVED 385 Query: 153 EVGFIAMHLVSA 164 E+ +IA+H+ A Sbjct: 386 EIAYIALHIGVA 397 >UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMM5_SEBTE Length = 655 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 102/240 (42%), Gaps = 16/240 (6%) Query: 52 LSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIY-ISLTDHCQFAIKRFQ 110 S + L EL E + +I+ +++L IY I++ H IKR + Sbjct: 185 RESRLNDENLYELFGQFGREEVEAVAKILKDTEQKLNYTMGEIYYINMITHILILIKRLR 244 Query: 111 QN-VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG- 168 +L N + DI++ + + + +E I + +++P++E FI +L+S+ M Sbjct: 245 NGNILYENKMRRDIRKTDKRIYTISQEMSGKITETFKIEVPEEETYFIYQYLISSGMEII 304 Query: 169 ---------NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEH 219 ++ + ++ E+++ I + Y+ L+ HLK + R+ + Sbjct: 305 NAGTDTSELLLDTSPVIMEIAEEIIRKISEIVDFKLTPDKQLYESLILHLKAMMNRLKYN 364 Query: 220 ASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQ-RKISPAEIMFLAINIERVRKEH 278 SI + + + +K+ + + + + +Y R ISP EI +L + +++ Sbjct: 365 ISIKN---PILEDIKKEFSAIYGLVGLVTLDTLEKYNIRAISPDEIGYLTFYFQAAVEQN 421 >UniRef50_B3WBC3 LicR (Transcriptional regulator) n=1 Tax=Lactobacillus casei BL23 RepID=B3WBC3_LACCB Length = 505 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 91/195 (46%), Gaps = 5/195 (2%) Query: 79 IISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEAL 138 ++++ + D+++ +L H + +I+R Q+ L D+ + E ++ +E Sbjct: 66 LVNVLMAHHYHISDTLFQNLIVHIEVSIRRIQEGFSLKTT-KPDLLHYFVSEIEVAKEIF 124 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV-TQLMREMLQLIKFQFSLNYQE 197 ++KR Q E+ +A++L N + V+ Q + + L IK +F +++ + Sbjct: 125 AGLEKRFSFQATDGELLNLAIYLRGKSDYQNDDYVSSDINQFIVKALDEIKEKFDVDFTQ 184 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 E L HL L R+ + +++ L +++++P A+ A + + + + + Sbjct: 185 EIDLRISLALHLMPLITRMKFNIQNSNA---LLDQIRKSFPLAFDIAAYMGLLLQQKIGQ 241 Query: 258 KISPAEIMFLAINIE 272 K+ +EI +LAI Sbjct: 242 KVKESEISYLAIYFN 256 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 10/114 (8%) Query: 94 IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDE 153 + ISL H I R + N+ N LL I++ +P F + ++ +++G ++ + E Sbjct: 188 LRISLALHLMPLITRMKFNIQNSNALLDQIRKSFPLAFDIAAYMGLLLQQKIGQKVKESE 247 Query: 154 VGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 + ++A++ + N + ++ +L E L QR T Sbjct: 248 ISYLAIYFNQYLIRYNDLSGSQKVLVV----------TNLKRSESVLLRQRFAT 291 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 15/229 (6%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPN 117 LS ++ + LE + + +I + E KL D + +L H ++R + L Sbjct: 181 LSTMVGNTFLEGINFAEIMIIVLYECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLE- 239 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG----NMEDV 173 I E+Q+ L +++ +G++ PK+E +IA+HL G + Sbjct: 240 LFSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTD 299 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 + ++ + I + + ++ +Q L+ H+ L+ R+ H + + L + + Sbjct: 300 EKLQDHLKACIAKISQLTGMTLETDTNLFQGLLAHMMPLTTRLENHIQLTN---PLTEEI 356 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKEH 278 K YP+ + ++ + + +S E +++++ IER H Sbjct: 357 KSQYPEIFTLTKQTFSDLLVCQNNDVSDDEWAYISLHLMAAIERYSNRH 405 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 5/143 (3%) Query: 30 GIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK 89 GI F K I K +++ H + E L + + C IS + Sbjct: 268 GIRFPKEEANYIALHLKVK-HSVGKHWQDDNTDEKLQ----DHLKACIAKISQLTGMTLE 322 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 +++ L H R + ++ L NPL +I+ YP+ F L ++ + + + Sbjct: 323 TDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLLVCQNNDV 382 Query: 150 PKDEVGFIAMHLVSAQMSGNMED 172 DE +I++HL++A + Sbjct: 383 SDDEWAYISLHLMAAIERYSNRH 405 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Ent... 254 3e-66 UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Ac... 250 3e-65 UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Ba... 244 3e-63 UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmi... 243 5e-63 UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Strepto... 242 1e-62 UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 239 8e-62 UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enteroco... 238 2e-61 UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-bind... 237 4e-61 UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus ... 236 5e-61 UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidob... 235 1e-60 UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exi... 234 4e-60 UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dic... 233 5e-60 UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Ent... 232 1e-59 UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Act... 232 1e-59 UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminoc... 232 1e-59 UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Strept... 231 2e-59 UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Ent... 231 2e-59 UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerot... 230 4e-59 UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 229 1e-58 UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nak... 228 1e-58 UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostri... 228 2e-58 UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacte... 227 2e-58 UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostri... 227 3e-58 UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridial... 226 8e-58 UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostri... 225 9e-58 UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Art... 225 9e-58 UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=The... 225 2e-57 UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collins... 224 4e-57 UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillu... 222 1e-56 UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Ent... 222 1e-56 UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Ent... 222 2e-56 UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=The... 221 2e-56 UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6... 221 2e-56 UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaeros... 221 2e-56 UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdol... 221 2e-56 UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 ... 220 3e-56 UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Fi... 220 4e-56 UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Ent... 220 5e-56 UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostr... 219 9e-56 UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdema... 218 1e-55 UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Ta... 217 3e-55 UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Ba... 217 4e-55 UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacill... 217 5e-55 UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostri... 216 7e-55 UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG fa... 215 9e-55 UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=... 215 2e-54 UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterm... 215 2e-54 UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clo... 215 2e-54 UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillacea... 214 3e-54 UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 T... 213 4e-54 UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus Rep... 213 7e-54 UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridi... 212 7e-54 UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Cor... 212 1e-53 UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax... 212 1e-53 UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Seb... 211 2e-53 UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collins... 211 2e-53 UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes... 211 2e-53 UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 T... 211 3e-53 UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 T... 210 3e-53 UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ7... 210 4e-53 UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridial... 210 4e-53 UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Cor... 210 4e-53 UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exi... 208 2e-52 UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillacea... 208 2e-52 UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Ent... 208 2e-52 UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clo... 207 3e-52 UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 T... 207 3e-52 UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria... 207 3e-52 UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Cl... 207 3e-52 UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecali... 207 3e-52 UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium... 207 4e-52 UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes ... 207 4e-52 UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collins... 207 5e-52 UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=... 206 5e-52 UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 T... 206 8e-52 UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria m... 206 8e-52 UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mu... 206 9e-52 UniRef50_P15401 Levansucrase and sucrase synthesis operon antite... 205 1e-51 UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Coryneb... 205 1e-51 UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lac... 205 1e-51 UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria... 205 2e-51 UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Pae... 205 2e-51 UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax... 205 2e-51 UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB 205 2e-51 UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostri... 204 2e-51 UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 ... 203 4e-51 UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostr... 203 4e-51 UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Ba... 203 5e-51 UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7V... 203 5e-51 UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 T... 203 6e-51 UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacill... 202 1e-50 UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecali... 202 1e-50 UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminoc... 202 1e-50 UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-bind... 202 2e-50 UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcu... 200 3e-50 UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clo... 200 4e-50 UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostri... 200 5e-50 UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leu... 200 5e-50 UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactob... 200 5e-50 UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdema... 200 6e-50 UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus... 199 1e-49 UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacte... 198 2e-49 UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bac... 197 3e-49 UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium... 197 4e-49 UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-bind... 197 5e-49 UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator... 196 6e-49 UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=La... 196 8e-49 UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococ... 195 1e-48 UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillale... 195 2e-48 UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collins... 195 2e-48 UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdema... 195 2e-48 UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macroco... 194 2e-48 UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12... 194 3e-48 UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaeros... 194 3e-48 UniRef50_A3CN37 Transcriptional antiterminator, BglG family, put... 193 4e-48 UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clo... 193 4e-48 UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collins... 193 5e-48 UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12... 193 6e-48 UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9... 191 2e-47 UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdema... 191 2e-47 UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax... 191 3e-47 UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1... 191 3e-47 UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium... 190 5e-47 UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Cl... 190 5e-47 UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collins... 188 1e-46 UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium ... 188 1e-46 UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bac... 188 1e-46 UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria gr... 188 1e-46 UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exi... 188 2e-46 UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 T... 187 3e-46 UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collins... 187 4e-46 UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostri... 187 6e-46 UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdema... 186 6e-46 UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clo... 186 6e-46 UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Bla... 186 8e-46 UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysip... 185 2e-45 UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 ... 184 3e-45 UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphyloc... 183 7e-45 UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria ... 183 7e-45 UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria Re... 182 9e-45 UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobaci... 182 9e-45 UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lac... 182 9e-45 UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acn... 182 1e-44 UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lacto... 182 1e-44 UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Seb... 182 1e-44 UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdema... 182 1e-44 UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostri... 182 2e-44 UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 T... 182 2e-44 UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-bind... 181 2e-44 UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Str... 181 3e-44 UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 T... 181 3e-44 UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 T... 180 4e-44 UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacte... 180 4e-44 UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdema... 180 4e-44 UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Strep... 180 5e-44 UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobac... 180 5e-44 UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacte... 179 1e-43 UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacill... 178 2e-43 UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Ent... 178 3e-43 UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdema... 177 3e-43 UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pedioc... 176 6e-43 UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Strep... 176 9e-43 UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicu... 175 1e-42 UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Seb... 175 1e-42 UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridi... 175 2e-42 UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Sub... 175 2e-42 UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax... 175 2e-42 UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostr... 173 6e-42 UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Ta... 170 3e-41 UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus Rep... 170 4e-41 UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 ... 169 1e-40 UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiter... 168 2e-40 UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacter... 168 2e-40 UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_... 165 2e-39 UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysi... 163 5e-39 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 163 6e-39 UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lac... 159 9e-38 UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacte... 158 1e-37 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 T... 157 3e-37 UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bac... 156 5e-37 UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriace... 155 1e-36 UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacill... 155 1e-36 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 151 2e-35 UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collins... 151 3e-35 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 150 4e-35 UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacill... 150 5e-35 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 150 7e-35 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 149 1e-34 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 148 2e-34 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 148 2e-34 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 148 2e-34 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 146 5e-34 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 146 6e-34 UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonel... 145 2e-33 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 144 3e-33 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 144 3e-33 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 144 4e-33 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 141 2e-32 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 141 3e-32 UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=... 140 4e-32 UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminoc... 140 4e-32 UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 ... 140 4e-32 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 140 4e-32 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 140 7e-32 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 139 1e-31 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 138 2e-31 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 138 2e-31 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 138 3e-31 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 137 4e-31 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 137 4e-31 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 137 5e-31 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 136 6e-31 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 136 6e-31 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 136 6e-31 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 136 7e-31 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 136 1e-30 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 135 1e-30 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 135 1e-30 UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bif... 135 2e-30 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 133 5e-30 UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebac... 133 5e-30 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 133 6e-30 UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator... 133 9e-30 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 132 1e-29 UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostri... 132 1e-29 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 132 2e-29 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 131 2e-29 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 131 2e-29 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 131 2e-29 UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) ... 131 3e-29 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 131 3e-29 UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=... 131 3e-29 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 130 4e-29 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 130 4e-29 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 130 6e-29 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 129 1e-28 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 129 1e-28 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 128 2e-28 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 127 3e-28 UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paeniba... 127 4e-28 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 126 6e-28 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 126 6e-28 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 126 7e-28 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 126 8e-28 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 126 8e-28 UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Strepto... 125 2e-27 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 125 2e-27 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 125 2e-27 UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pec... 125 2e-27 Sequences not found previously or not previously below threshold: >UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Enterobacteriaceae RepID=C6DCM5_PECCP Length = 278 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 106/274 (38%), Positives = 181/274 (66%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KIL+NN V+V+ D +RE V +G+G+GF K+ G+ I+ IE ++ S + LS Sbjct: 1 MIIKKILSNNAVLVLADDRREIVAIGKGVGFGKKVGDPIDQQRIESQFVKKSDGMADVLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP + +A +II+LAQ+ L +QD+++++L+DH FAI+R ++ + N +LW Sbjct: 61 QLLADIPPDCLAVTQQIITLAQKTLRLNVQDTLFLALSDHINFAIQRHKKGQTIKNLMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++ Y EF +G EAL +I RLG+ LP+DE GFIA+HL +A + +M+ +++ Sbjct: 121 DIRQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLANATNNSDMQSTMQSAGIIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ + + E SL+YQRLVTHLKF + R+L +++ D+S+ Q + + P+A+ Sbjct: 181 DILTILKYDLHITFDEHSLNYQRLVTHLKFFALRLLNRETVSHGDDSIYQGITEMMPRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 CA ++ ++ Y +++ EIMFL I+I R++ Sbjct: 241 ACAMKVYDYVEKNYGCQLTTDEIMFLTIHINRLQ 274 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 5/106 (4%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 + + ++++ L + + + L H+ F R + +I + + Sbjct: 65 DIPPDCLAVTQQIITLAQKTL--RLNVQDTLFLALSDHINFAIQRHKKGQTIKNL---ML 119 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++Q Y + I + + E F+A+++ Sbjct: 120 WDIRQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLANATN 165 >UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Actinobacteridae RepID=B3DQG5_BIFLD Length = 279 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 151/275 (54%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ E ++ GRG+GFQ + G+ ++ S + + + S L+ Sbjct: 1 MEILRVFNNNVVLAKGGDGGEVILTGRGLGFQAKPGQTVDESKVVRTFVPSDGRDPDHLA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L+ IP E++ + A + ++ ++L+DH A++R ++ + + PLL Sbjct: 61 QMLADIPPEIIRVVVESMQEAGLGERETGSTTLVMALSDHVANAVERVRRGIDITYPLLG 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 ++ LYP+E+ G L ++ RL V LP E +AMHLV+A +G++ +T ++ Sbjct: 121 EVSNLYPQEYAQGRAMLASLNARLDVTLPDGEATALAMHLVNAGFATGDLSYTYTMTGVI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +I + + S++ R +THL++L RI +H + D + + ++++YP A Sbjct: 181 QQLLDIIDHSYGITLDRSSVNVGRFITHLRYLFVRIHQHQQLTDEPAPVMKVIRESYPAA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +CA IA + L+ IS E +LA+++ RV Sbjct: 241 LRCARTIASLLELRLDTDISDDETAYLAMHVARVT 275 >UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Bacteria RepID=ARBG_ERWCH Length = 283 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 149/276 (53%), Positives = 207/276 (75%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV V+D+Q E+VVMGRG+GF+KR G+ +N++ IEK ++L S EL RLS Sbjct: 1 MKIAKILNNNVVTVMDEQNNEQVVMGRGLGFKKRPGDTVNAALIEKIFSLRSSELTARLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L IPLEV+ T DRII+LA+E+LG LQ+S+YISLTDHC FAI+R +Q V + N L W Sbjct: 61 DVLERIPLEVVTTADRIIALAKEKLGGNLQNSLYISLTDHCHFAIERHRQGVDIRNGLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++RLY KEF +G +AL II +RLGV+LP+DE GFIA+HLV+AQ+ +M +V +T++M+ Sbjct: 121 EVKRLYQKEFAIGLDALDIIHRRLGVRLPEDEAGFIALHLVNAQLDSHMPEVMRITRVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+Q +L+Y E++ SY R VTHLKF + R+L + DESL VK+ Y A+ Sbjct: 181 EILNIVKYQLNLDYNEQAFSYHRFVTHLKFFAQRLLGRTPVFSEDESLHDVVKEKYTLAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 CAE+I I L Y ++ E+MFLAI+IERVR E Sbjct: 241 HCAEKIQDHIMLHYDYTLTKEELMFLAIHIERVRSE 276 >UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmicutes RepID=LICT_BACSU Length = 277 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 116/276 (42%), Positives = 192/276 (69%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNNV+ V+++Q +E VVMGRG+ FQK++G+ ++ + IEK + L + +++ + Sbjct: 1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTLDNKDVSEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP+E M + IIS A+ +L KL DSIY+SLTDH FAI+R Q+ + + N LLW Sbjct: 61 TLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +RLY EF +G+EAL ++ + GV LP+DE GFIA+H+V+A+++ M ++ +T++M+ Sbjct: 121 ETKRLYKDEFAIGKEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E+L ++K+ F + + EESL Y R VTHLKF + R+ + D+ L VK+ Y +A+ Sbjct: 181 EILSIVKYHFKIEFNEESLHYYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +C ++I +I +Y+ K++ E+++L I+IERV K+ Sbjct: 241 ECTKKIQTYIEREYEHKLTSDELLYLTIHIERVVKQ 276 >UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Streptococcus RepID=C5WHP5_STRDG Length = 288 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 168/276 (60%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +M I K+ NNNV+ V DD +E +VMGRG+GFQK+ G+ I+ IEK + + + + L Sbjct: 4 HMIIEKVYNNNVIQVRDDSDQELIVMGRGLGFQKKIGDAIDQRKIEKTFTFQNQQTSADL 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L +P E + +I A++ LG +++++SLTDH F + R +Q V + NPL Sbjct: 64 SDLYEQLPDEELNLFISLIDQAEQSLGLTFDENLHLSLTDHLHFMVVRVRQGVSISNPLA 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W++++ Y +E+Q+ +E L + K+L + +P DE IA+HL++AQ + + T+L Sbjct: 124 WEVRKFYAQEYQVAKEMLVHLRKKLALDIPDDEAASIALHLINAQTETDGISKSQRTTRL 183 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L++++ F E+S+SY R VTHL++ S R++ +D L VKQNYP Sbjct: 184 VIDILEIVRLHFGKLVSEDSISYNRFVTHLQYFSQRVVNGVVQGSNDAFLYDQVKQNYPN 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ C ++IA ++ Y +S E ++L I+I+R++ Sbjct: 244 SFICTQKIAHYVKENYDFDMSVDEKVYLTIHIQRMK 279 >UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 Length = 285 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 105/278 (37%), Positives = 178/278 (64%), Gaps = 2/278 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNNVV+ +E VVMGRG+ FQK+ G+ + IEK + + +HEL+ +LS Sbjct: 1 MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKLGDEVEVPKIEKTFVMETHELSEKLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPL+ + D ++ AQE L L D+IY++LTDH FA+ R+ Q + L N LLW Sbjct: 61 ELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHINFAVSRYNQGINLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+R Y E+ +G +AL I++ +G++L +DE GFIA+H+V+A+ M +TQ++ Sbjct: 121 EIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHIVNARQDGQQMHMTVAMTQIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L ++ + + + E SL+Y R +THL++ + R+L ++ D+ L + V+ YP+A Sbjct: 181 QDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLRKEIVDSGDDFLYEQVQIKYPEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C ++I ++ + +++ E ++L I+I RV + + Sbjct: 241 FNCTKKIDAYLLNTHHTELTRDERVYLTIHIYRVTERN 278 >UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enterococcus RepID=C2HCM5_ENTFC Length = 306 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 174/281 (61%), Gaps = 4/281 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM I K+LNNNVV+ D++ +E +VMG+G+ F+K+ G+ I S I+K++ L++ L+ + Sbjct: 23 NMLIEKVLNNNVVITRDERNQEMIVMGKGLAFKKKVGDPIFDSCIDKKFQLTNDGLSQQF 82 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL IPLE + II +E L +L DS+YI+LTDH AI+R + + +PN LL Sbjct: 83 QELAQAIPLEYLEISCEIIEYTKEALQVQLNDSVYIALTDHLYTAIERHKMGIFVPNVLL 142 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 +DI++L+ KE+ +G++ + I + ++L +DE GFIA+HLV+AQ + ++ T Sbjct: 143 YDIKQLFHKEYAIGKKTVKKISDKYHIKLSEDEAGFIALHLVNAQGIQSQQDNTYLFTIT 202 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNY 237 ++++L ++++ + + + E+S+ + R VTHL+F R+L+ + E L Q +++ Y Sbjct: 203 IQDILNIVRYYYKITFDEDSVHFFRFVTHLRFFLTRVLDGEKSEVGEVSEELFQVIQKKY 262 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C E+IA F+ + ++S E M+L I+ R+ E+ Sbjct: 263 KDTFGCVEKIADFLAETFNYQMSTDEKMYLTIHTARLVHEN 303 >UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-binding protein n=38 Tax=Enterococcus RepID=C9B3C8_ENTFC Length = 283 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 178/277 (64%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNVV+ + E V MGRG+ FQK+ G+ I+ ++KE+ L + Sbjct: 1 MKIDKILNNNVVISKNGFGEEVVCMGRGLAFQKKIGDEISPEAVQKEFILRDSFAKNQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L++ IP E + +++ A+++L + +IY++LTDH +AI R ++N+ LPNPLL+ Sbjct: 61 QLMADIPAEEIEWVKQVVEQAEDKLKVEFSPNIYLTLTDHLHYAITRAKENIQLPNPLLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 + ++ YPKE+Q +EAL + ++ GV+L +DE GFIA H V++Q + +M+ T ++ Sbjct: 121 ETKKFYPKEYQAAKEALLFVKQKTGVELSEDEAGFIAFHFVNSQQGNEDMQVTMTATTMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R++L +I F + + EESL+YQR++THL+F + R L+ ++ DE L V++ YP+A Sbjct: 181 RDILSIISKFFGIVFDEESLNYQRIITHLQFFAQRYLKGEGSDEQDEFLYALVQEKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + C ERI ++ ++++ AE ++L I+I+RV E Sbjct: 241 FHCVERINEYLRQTQKQEMGIAEQIYLTIHIQRVVSE 277 >UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus RepID=A8F9J0_BACP2 Length = 278 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 104/275 (37%), Positives = 188/275 (68%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+LNNNV+ VID+Q +E VVMGRGI FQ+R G+ ++ S I+K + L H ++ R+ Sbjct: 1 MQIQKVLNNNVISVIDEQGKEIVVMGRGIAFQRRPGDPVDESLIDKVFRLEDHSVHERMK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL +P +V+ + +I A +L + L +S+++SL DH +AI+R ++N L+ N L+W Sbjct: 61 MLLLEVPYDVVKVTEEMIQYAHTKLNRRLNESLHVSLADHIHYAIERLKKNHLIENSLIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+RLY EF + ++ L +I++RL ++LP+DE GFIAMH+++A+++ +M +T+ + Sbjct: 121 EIKRLYKDEFLVAKDCLEMIEERLHIELPEDEAGFIAMHIINAELNEDMNTTVNITKEVN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L ++K+ ++ + E+SL++ R +THL+F R++ + D+ L Q +K YP+A+ Sbjct: 181 AILTIVKYHLNMEFDEDSLNFYRFLTHLRFFVQRLINETILVSEDQDLYQLIKVKYPKAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +CA++IA ++ Y R ++ E+++L+I++ R+ K Sbjct: 241 ECAKKIAEYVYQTYHRDLTSEEMLYLSIHLNRLIK 275 >UniRef50_C4FGL9 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FGL9_9BIFI Length = 303 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 159/276 (57%), Gaps = 3/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNNVV+ D + E ++ GRG+GFQ + G+RI+ S + + + S + Sbjct: 19 TVEVLRVFNNNVVLAKDGK-SEVILTGRGLGFQAKPGQRIDESKVVRRFVPSDGRDPDHM 77 Query: 62 SELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +ELL+ IP E++ ++ + + ++ ++L DH AI+R + V + PL Sbjct: 78 AELLADIPPEIIRLVAEAMTRIGMGAQVERRPALVMALADHLTGAIRRINKGVNVEYPLQ 137 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 ++Q LY +E++ E+ + I++ LG LP+ EV AMHLV+A + G++ +T + Sbjct: 138 AEVQSLYAREYEQAEKLVAILNTYLGGILPEGEVSAFAMHLVNAGFTTGDLSRTYKITGV 197 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +++ML++I+ + + + S++ R +THL++L RI ++ ++ + + ++K+ Y Sbjct: 198 IQQMLKVIEQSYGVKLDQHSVNVGRFITHLRYLFVRISQNKQLDREPQPIINSIKETYSD 257 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A +CA++IA L+ ++ E+ +LA++I RV Sbjct: 258 AMRCADKIAAVAALRLDAHLTEDEVAYLALHISRVT 293 >UniRef50_C4L0E0 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0E0_EXISA Length = 283 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 113/281 (40%), Positives = 175/281 (62%), Gaps = 7/281 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+K+ NNNVV ID +E+VVMGRGI FQKR G+ I+ + IEK + L S E R Sbjct: 1 MHISKVFNNNVV-AIDANGQEQVVMGRGIAFQKRPGDPIDQTRIEKIFTLESKESYERFV 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + M T +I+ LA+ RL + DS+Y++L DH FA+ R+Q + + NPL+W Sbjct: 60 HFLNEMPTDEMETVKQIVRLAEGRLTQPIHDSLYVTLADHLHFALSRYQDGIQIRNPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS----GNMEDVAGVT 177 +++R Y EF +G+EA+ +I++R V+L +DE IA+HLV+A MS N+ V +T Sbjct: 120 EVKRFYAPEFAIGKEAVKLINERHEVKLDEDEAVAIALHLVNATMSGVKGENLHLVTEMT 179 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQN 236 + + +L +I + F + EES +Y R +THLK+ R+ + + DE+L VKQ Sbjct: 180 RATQAILTIITYHFQIELDEESYAYARFLTHLKYFVQRLASGEKVKSTGDETLFLMVKQR 239 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+A++C E+IA I +Y +S E +++ I+IE + KE Sbjct: 240 YPEAFECVEKIAGLIATKYHYDVSMDERLYMMIHIENLMKE 280 >UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKX7_DICZE Length = 289 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 171/281 (60%), Gaps = 5/281 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF R G+ + + +EK + L ++ R Sbjct: 1 MKITQVLNNNVVSVIDNQGQELILTGCGLGFHSRNGQDVEITRVEKIFRLQDDAISTRFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +PLE++ I+ + + +L + L + IY++L DH FA++ + ++ NPL W Sbjct: 61 HLAQEVPLEILQLTADIVEMVKTQLPQKLSEGIYVTLADHLAFALQCQRNGTVIQNPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y +EF + E+AL +I + LGV LP DE IA+H+V+A++ N+ ++ +TQL+ Sbjct: 121 EVRHFYKQEFAVAEQALALIREALGVALPNDEACSIALHIVNAELGDNIGNMKQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF S R++E ++++ D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSGNYHRFITHLKFFSQRVMEGTTLDNDDGELFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKEH 278 C E I FI YQ ++ +E ++L I+ I R+ + H Sbjct: 241 GCVEAINTFIKKNYQHTMTNSEKLYLTIHIDNMIHRLTQHH 281 >UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AZS3_ENTCA Length = 279 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 163/278 (58%), Gaps = 2/278 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M+I K+ NNN +V++D +E+VVMG GIGF R G+ ++ IEK + ++ + Sbjct: 2 LTMEIVKVFNNNASLVLNDNHQEEVVMGSGIGFGLRPGDTVDQKKIEKRFIINDQKSIAD 61 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L +LL I + I+ L +E + ++ ++L DH FA+ R ++ + + PL Sbjct: 62 LEQLLKRIEYRDLQLASDILKLFEEAFQCESNPALLVALADHIGFALTRAREGMKIQTPL 121 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 W+++++YPKE+++G +A+ ++ KR + +PKDE FI +H V+ N ME+ +++ Sbjct: 122 EWELKQVYPKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVNFLGDNNGMEETMLISK 181 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +M+++L +I + + ++++S+ + R +TH+++ R + + SL ++ YP Sbjct: 182 VMKDILTIINYHYGKEFRQDSIYFSRFITHIRYFVKRQMSNELPAQPASSLLDVIQLKYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++CA +I F+ +YQ +I+ E+++L +++ R+ Sbjct: 242 LDYECAMKIKQFLENRYQWEITEDEVLYLTLHLNRLAS 279 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 5/105 (4%) Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 QL ++L+L + F + L H+ F R E I L+ + Sbjct: 71 YRDLQLASDILKLFEEAFQC--ESNPALLVALADHIGFALTRAREGMKIQT---PLEWEL 125 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 KQ YP+ ++ + + + I E F+ ++ ++ Sbjct: 126 KQVYPKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVNFLGDN 170 >UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMZ3_ACTSZ Length = 280 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 169/277 (61%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ITKI NNN + ++ Q E VV+G+G+ F K+ G+ + S +EK ++L+ GRL Sbjct: 1 MLKITKIFNNNAIQAENELQTELVVLGKGVAFGKKVGDSADESLVEKTFSLNKSLFAGRL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +E+LS IP E + ++ A ++L L +SI++SL DH A++R +QN +PN LL Sbjct: 61 TEILSEIPQEYFQLTNCVVDFANQQLGTTLSNSIFVSLPDHIFHAVERAKQNQTVPNGLL 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 ++IQRLY +EF +G L +I+KR GVQ+ +DE GFIA+H+ +A+ M D TQ+ Sbjct: 121 FEIQRLYKQEFAIGLYTLQLIEKRFGVQMTEDEAGFIALHIFNARTDGSTMADTYKATQM 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++++L ++ + F+L E S Y R +THL+ + R ++ D+ L + K YP+ Sbjct: 181 IKDILNMVGYHFNLVLDENSYDYARFLTHLQHFAQRFFVNSEPASGDDFLYRQTKIAYPK 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+QC E+I ++ Y + ++ E ++L I+I R+ Sbjct: 241 AYQCVEKINKYLTANYHKPLNEDEQLYLMIHIRRIIS 277 >UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B640_RUMGN Length = 278 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 105/274 (38%), Positives = 174/274 (63%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI+NNN+V +D + RE VVMGRG+GF + G +I + IEK + + S L + Sbjct: 1 MLIEKIINNNIVSAVDSKGREVVVMGRGLGFGMKPGRQIQENKIEKVFRIKSQTLAEQFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ +PLE + II+ A+E L KL SIY++LTDH FAI R+QQ + N LLW Sbjct: 61 DLLADMPLEHVKVSSDIITYAKENLKLKLNQSIYVTLTDHINFAITRYQQGIKPQNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +E++LG A+ I+++L ++LP+DE GFIA+H ++A+ ++ D L++ Sbjct: 121 EIKRFYSREYELGMYAVKTIEEKLRIRLPEDEAGFIALHFLNAEYGTDIRDAVKFPNLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L++++ + + E SL Y+R VTH+KFL R+ + D + L + +++ Y + + Sbjct: 181 KILEIVEEKLQIELDETSLHYERFVTHIKFLLQRVYRKELLPDEESELAELMQKKYQKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 C++ +A +I + + +S EIM+LAI+I RV Sbjct: 241 DCSKMVAAYIEEETKCSLSGEEIMYLAIHIRRVT 274 >UniRef50_C2LUU8 Transcription antiterminator LicT n=4 Tax=Streptococcus RepID=C2LUU8_STRSL Length = 280 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 100/276 (36%), Positives = 167/276 (60%), Gaps = 3/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 MQI KILNNNVV +D E +VMG+G+GFQK+ G+ ++ IEK + L + E Sbjct: 1 MMQIEKILNNNVVQALD-NNVEYIVMGKGLGFQKKVGDLVDKEKIEKTFVLENTEAVEEW 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S + ++P M I++ A+ L K S +I+L DH +AI+R + V L NPL Sbjct: 60 SRVYVNLPDGEMQVFLNILTFAEAVLQTKFDPSFFIALADHLHYAIERSSEGVSLQNPLA 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED-VAGVTQL 179 W++++ YP+E+++G++AL +I K L VQL DE +A+H V+AQ + + +TQ+ Sbjct: 120 WEVRKFYPREYEIGKQALRLIAKDLEVQLADDEAASVALHFVNAQKDAGLHEKDRQMTQI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + +++ F + +E+S SY R +THL++L+ RI+ S +D L + VK NYP+ Sbjct: 180 VVGISDIVRLHFGYDLEEDSFSYNRFMTHLQYLAQRIVSGVSGGKNDAFLYEQVKLNYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ C ++IA +I Y +S E ++L I+I+R++ Sbjct: 240 SFVCTKKIATYIETSYAFDLSLDEQVYLTIHIQRLK 275 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 41/101 (40%), Gaps = 5/101 (4%) Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 Q+ +L + + + + L HL + R E S+ + L V++ Sbjct: 71 MQVFLNILTFAEAVLQTKF--DPSFFIALADHLHYAIERSSEGVSLQN---PLAWEVRKF 125 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+ ++ ++ I + +++ E +A++ +K+ Sbjct: 126 YPREYEIGKQALRLIAKDLEVQLADDEAASVALHFVNAQKD 166 >UniRef50_C6CA98 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=C6CA98_DICDC Length = 281 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 96/275 (34%), Positives = 172/275 (62%), Gaps = 1/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT++LNNNVV VID+Q +E ++ G G+GF GE ++ S IEK + L ++ R Sbjct: 1 MRITQVLNNNVVSVIDNQGQELILTGCGLGFHSHTGEEVDDSRIEKIFRLQDDAISARFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ +PL V+ D I+ LA+ L + L + IY++L DH FA+ + ++ NPL W Sbjct: 61 DLVHEVPLAVLQLTDDIVELARRTLQQRLSEGIYVTLADHLTFALNCQRDGTVIRNPLHW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +AL +I ++L V LP+DE IA+H+V+A+++ ++ ++ +TQL+ Sbjct: 121 EVRRFYRQEYAVAAQALALIAEKLHVSLPEDEACSIALHIVNAELNDDIGNMRQITQLIY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ ++K+ F ++ E S +Y R +THLKF + R++E ++ + D L V+Q Y + Sbjct: 181 QVQNIVKYYFQVSLDENSSNYHRFITHLKFFAQRVVEGMTLENDDGDLFTMVQQRYQKTL 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E I++FI Y +S +E ++L I+I+ + Sbjct: 241 GCVEAISLFINNHYHHVMSNSEKLYLTIHIDNIIH 275 >UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCB1_9FIRM Length = 305 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 107/274 (39%), Positives = 163/274 (59%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNN+V D+ +E VVMGRGIGF+ R G+ I IEK + + + RL Sbjct: 28 MKILKAINNNIVSARDENGKEIVVMGRGIGFKCREGDSIPPEAIEKIFHMDTQNETDRLK 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L S +PLE + +RII+ A++ L +L SIYI+LTDH F++ RF+QN++ N LL Sbjct: 88 QLFSSMPLEHIEVTNRIIAYARKILGKRLNHSIYITLTDHISFSVLRFRQNMMFHNALLA 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R YP+E+ +G+ AL +I K LGV+ P DE IAMH+V+A+ ++ + +T L+ Sbjct: 148 EMRRFYPQEYSIGQYALDLIAKELGVRFPDDEAASIAMHIVNAEYDISLGEAVDITHLID 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +ML++++ E S+ + R VTHLKFL+ R L D +L A+ YP Sbjct: 208 QMLRIVRDWHRRPLDETSVDFDRFVTHLKFLAQRALRQDRPPAGDRALYDAIAALYPGET 267 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 CA R+ ++G + I E LAI+I RV Sbjct: 268 ACAHRVGAYLGDTHSFLIGDLEAACLAIHIRRVT 301 >UniRef50_A0AFA4 Complete genome n=2 Tax=Listeria RepID=A0AFA4_LISW6 Length = 281 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 88/275 (32%), Positives = 160/275 (58%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV+VI++ EK++MG+GIGFQK G+ ++ + +EK + L+ G+L Sbjct: 1 MIIKKVFNNNVVLVIENPTEEKILMGKGIGFQKFPGDPVDLANVEKTFVLNDEATEGKLD 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +PLEV+ C ++ ++ L + D++ I L DH FAI R ++ + + PL W Sbjct: 61 AFFEEVPLEVIQMCAHLLKSGKKVLGPHITDNLLIPLADHINFAITRVKEGIQIEYPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+ +YP+E E + + + ++LPK+EV IAMH V+A++ + + +T L+ Sbjct: 121 EIRHMYPEEVAFAESVIKWMKDKENIELPKEEVVPIAMHFVNARIGTAEVNQAFEMTTLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L +I + + + E+SL+Y RL+THL++ R ++ S + L VK YP+A Sbjct: 181 AKILDIINYHYLIQVDEDSLNYARLMTHLRYFILRQMKKESDIVEEAILYDVVKSKYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++CA ++ + ++ E+++L ++I RV Sbjct: 241 FECALKVKKLLEETMGWIVNHDEVLYLTLHIHRVT 275 >UniRef50_C8XAD4 Transcriptional antiterminator, BglG n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAD4_NAKMY Length = 289 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 155/276 (56%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ K+ NNNVV+ D++ E V+ GRG+GF+ AG ++ S +E+ + S R++ Sbjct: 1 MQVLKVFNNNVVLGRDERGVEHVLFGRGLGFKVTAGATVDESRVERRFGPSGTGGVDRIA 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNV-LLPNPLL 120 L++ IP E + RI+ LA+ RL + D I + L DH FA++R + + PL Sbjct: 61 ALVNEIPPEDIDLTGRIVELARGRLGPHITDHILLPLADHLSFALRRAAEGAGEIEYPLR 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W++Q LYP E Q+ AL ++ + GV+LP+ E +A+HLV+AQ ++ A +TQ Sbjct: 121 WEVQYLYPAEVQVARAALDLVAQERGVRLPEVEAVPLALHLVNAQFDTSDISTTAQMTQT 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + L +I+ ++ + E S+ R VTHL++L R + + ++ L A++ P+ Sbjct: 181 LHRTLDIIREEYGVEIDEGSVEVARFVTHLRYLFLREQQGRKLRETPAELHAALQSARPR 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A RI + QY IS EI++LA+++ R+ Sbjct: 241 EYTSAGRIGTLLADQYGWAISTDEILYLALHVSRLV 276 >UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B6FYA9_9CLOT Length = 293 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 175/275 (63%), Gaps = 1/275 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M++TK++NNN V +++ +E +VMG+GIGF+ + G+ I+ S +EK + ++ + Sbjct: 12 MFMKVTKVINNNFVCSCNEKNKEIIVMGKGIGFKAKEGDEIDKSKVEKVFTMNGKSAIDK 71 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ +P+E + II+ A+ L +L +IYI+LTDH F++ RF+ + NPL Sbjct: 72 FKRLIEELPIEHFKVSNDIINYAKRTLGKRLNQNIYITLTDHINFSVYRFKNGMKFSNPL 131 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 LW+++ Y E+ +GE A+ +I ++LGV++ +DE IA+H+V+A+ + M D +T L Sbjct: 132 LWEVKHFYNPEYIIGEYAVNLIKEKLGVEMGEDEAANIALHIVNAEYNTEMNDALKITTL 191 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L+++ F + EESL Y RL+THLKFLS RI + DSD+ + + YP+ Sbjct: 192 IGDILKIVTDTFDIQLDEESLHYSRLITHLKFLSQRIFMGEMLKDSDDVFAEMIATKYPE 251 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++CA +I +I QY ++IS E+++LA++I RV Sbjct: 252 EFKCALKIRDYIEEQYNQRISNEELVYLAVHIRRV 286 >UniRef50_A5ZAD7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAD7_9FIRM Length = 279 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 162/274 (59%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D+ RE V+MG+GIGFQK+ G+ + IEK++ L S + G+ S Sbjct: 1 MIINKVINNNVLSTHDENNREIVLMGKGIGFQKKVGDEVAEDKIEKKFVLDSEDEVGKFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP + IIS AQ+ + +L SIYISLTDH F ++R + L NPL Sbjct: 61 ELIEMIPHNYLNLSVDIISYAQQVMPKRLSPSIYISLTDHINFLLERSTKGELFENPLFN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ YP E+ +G++AL +I+ G++LP+DE IA+H V A+ + M D T ++R Sbjct: 121 EIKSFYPSEYLVGKKALELIESEAGIKLPQDEAASIALHFVIAEYNMGMSDTVNATTMIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + +++ + + E L Y R +THLKF + R+ +++ D+ + YP+ + Sbjct: 181 ECISIVEKELGIKLDELGLHYSRFITHLKFFAQRMFAGELLDNQDQEFLDMIINKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +E+I+ F+ +Y I E ++LA+ I+R++ Sbjct: 241 DISEKISQFVQSKYGYDIPKEEKVYLAVYIKRIQ 274 >UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY82_9CLOT Length = 280 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 108/277 (38%), Positives = 175/277 (63%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K LNNNV VV D E +VMG+GI + K+AG+ ++ +EK++ S+ + + + Sbjct: 1 MKIKKKLNNNVAVVTDKTGNEIIVMGKGITYDKKAGDCVDVEQVEKQFVPSNKDFSMKFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L IP + + + II A++ L ++ D+IYISLTDH A+KR+ + +PNPLL Sbjct: 61 EILLDIPSKYLEVSNCIIERAKKYLDAEIDDNIYISLTDHIHMAVKRYLDGMQVPNPLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R Y KE+++G +AL II +L V+LP+DE GFIA H V+AQ + + + +L++ Sbjct: 121 DIKRFYNKEYEIGCQALEIIKDQLKVELPEDEAGFIAFHFVNAQQNLESSKMVDIMKLVK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI-LEHASINDSDESLQQAVKQNYPQA 240 E+ ++K+Q L++ EES+ Y R +THLKF + R+ LE+ D D L VK+ Y +A Sbjct: 181 EITNIVKYQMGLDFDEESVYYYRFITHLKFFAQRLFLENKQYTDEDNPLYHIVKEQYKKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + C + + F+ +Y KIS E ++L ++IE + + Sbjct: 241 FNCTQSVVKFVDNKYNYKISKEEQLYLTVHIENIITK 277 >UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIH6_9FIRM Length = 276 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 161/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNN ++V + + +E++VMGRG+ F+ + G R+ +E+ + + S Sbjct: 1 MKVLKILNNNFILVENAKGQEEIVMGRGLRFKTQVGGRLEEKDVERRFVSGQGGILKDYS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ IP E + + A L L + +L DH +A++R Q+ ++L N LLW Sbjct: 61 RMIEEIPQETLEAVQEAVDAAGSSLSCPLDSQAFFTLLDHLIYAMERCQKGIVLQNRLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+E++ G++A+ +++RLG++LP++E G IA HLV+AQ G ME +++ Sbjct: 121 EVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNAQTEGMTMERTMSSVKMV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +++F ESL + R VTHL+F R+LE + ++D L + + + YP Sbjct: 181 KDILTVVQFHMKKELDTESLYFSRFVTHLQFFVQRLLEGRMLEETDSFLYEQISRQYPNE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A +I+ ++ + I+ EI++L I+I RV Sbjct: 241 LEAAMKISGYVEKSTKTLITREEILYLTIHITRV 274 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 44/117 (37%), Gaps = 5/117 (4%) Query: 161 LVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA 220 ++ E + ++E + S +S ++ L+ HL + R + Sbjct: 55 ILKDYSRMIEEIPQETLEAVQEAVDAAGSSLSCPL--DSQAFFTLLDHLIYAMERCQKGI 112 Query: 221 SINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + L VK+ YP+ ++ + ++ + K+ E +A ++ + E Sbjct: 113 VLQNR---LLWEVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNAQTE 166 >UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0MGF2_9FIRM Length = 291 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 183/277 (66%), Gaps = 1/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK++NNNVV D+ E ++MG G+GF+ + G+ ++ S I+K + L ++ R Sbjct: 8 MKITKVINNNVVSSTDEAGNEVILMGTGLGFKGKEGKVVDESKIQKIFHLEDAGVSQRFK 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL++ +P+E++ TC II A+ L KL ++IYI+LTDH FA++R +Q+++ PNPL Sbjct: 68 ELITDLPMELLNTCSNIIMYAKGILDTKLNENIYITLTDHINFALQRMEQDMMYPNPLSR 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ Y E+++GE AL I++K LGV+LPKDE IA+H+VSA+ + D +T ++ Sbjct: 128 EVKTFYDLEYKIGEYALGIVEKDLGVRLPKDEAVSIALHVVSAEYDTKVRDTVQITTFIK 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +K F + E SL+Y+R +THLKFLS +++ +++ + L++ + YP + Sbjct: 188 NVIDKVKDYFQMELTETSLNYERFITHLKFLSRKVMSGGGMDEIEPELRKMISAMYPDEY 247 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 QC+ IA +I +Y+R++S EI++L ++IER++ + Sbjct: 248 QCSREIAEYIKKEYRREMSEGEIVYLTMHIERIKSSN 284 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 71 EVMATCDRIISLAQERLGKLQDSI---YISLTDHCQFAIKRFQQN---VLLPNPLLWDIQ 124 ++ +I ++ Y H +F ++ + L I Sbjct: 181 QITTFIKNVIDKVKDYFQMELTETSLNYERFITHLKFLSRKVMSGGGMDEIEPELRKMIS 240 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 +YP E+Q E I K ++ + E+ ++ MH+ + S ++++ Sbjct: 241 AMYPDEYQCSREIAEYIKKEYRREMSEGEIVYLTMHIERIKSSNQTKNISK 291 >UniRef50_A0JW54 Transcriptional antiterminator, BglG n=2 Tax=Arthrobacter RepID=A0JW54_ARTS2 Length = 276 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 159/272 (58%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K+LN++VV+V D+Q E+V++G+GIGF ++AG RI+ +G+++ + + L Sbjct: 1 MQVIKKVLNSSVVLVEDEQGVERVLLGKGIGFGQKAGTRIDGTGVDRVFVSLDDINHENL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS +P+E + +I+S A+ +L IY+ LTDH FA++R ++ +++ N L W Sbjct: 61 VELLSQVPVEFVELTRQIVSDAESEGLELDPHIYLVLTDHLHFAVERKKRGLVVVNRLAW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ +YPK++ +G A+ +++ G LP DE IA HL +A+ D V +L+R Sbjct: 121 EMRTVYPKQYAVGSRAVELMNTHKGFALPDDEAANIAFHLANAERGKAGLDSMRVVELIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 + ++ + + L+ R VTHL++L+ R + D+ L ++ + YPQA Sbjct: 181 AVTTIVSNTAGVRVDRQDLNSSRFVTHLQYLAERFFTSRLLESDDDFLFHSLSERYPQAI 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 AER+ F+ ++Q ++ E+ FLA++I R Sbjct: 241 ATAERVRAFVQKEHQTRLPNEEVAFLALHIAR 272 >UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6P9_THEAS Length = 285 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 145/279 (51%), Gaps = 4/279 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++++K+LNNNVV+ E V++GRGIGF ++ G+ + S EK + L + R Sbjct: 1 MLRVSKVLNNNVVIASHASGWETVLVGRGIGFGRKVGDPVEESWAEKVFVLKDPKERLRY 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++L+ I A + I++ ++ L L + I+ SLTDH FA+KR ++ + + NP Sbjct: 61 AKVLAEIDGSFAALVAQGIAIMEDHLGVPLGERIHASLTDHLFFAVKRLREGIAVRNPFA 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++ +YPKE + L + + + + +P DE F+A+H+ SA ++ VA +++ Sbjct: 121 REVAAMYPKEHAASQAMLRWLSEEVHLDMPDDEAAFVALHVHSAMGGEDLGRVAWKNRVI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES---LQQAVKQNY 237 E++ + + S Y R + HL F R+ + + L++ +K+ Sbjct: 181 SELVAITEESLGFRLDRLSPHYMRFIRHLSFSIDRVEGGIEGDLEGDPISTLEETMKREN 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P + A ++ +++ R I PAE+++L I+I R+ Sbjct: 241 PVPYGIALKLCLYMRNALDRPIPPAEVVYLTIHIHRLYN 279 >UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP7_9ACTN Length = 295 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 95/275 (34%), Positives = 156/275 (56%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++ NNNVV+V DD E++ +G+GI F ++ G+ ++S+ IEK + L RL Sbjct: 1 MYIKRVYNNNVVMV-DDAGTERIAVGKGIAFGRKRGDMVDSASIEKVFTLDDPTQLSRLE 59 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP E + + I+++ + E + DS+ I+LTDH A++R Q ++ NPLL+ Sbjct: 60 RLIKGIPSEYLLIAEDIVAMLRRESDSVIDDSVLIALTDHISMALEREQAGIICDNPLLF 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +EF+L +A II LG+++ + EVGFIA+H+V+A M + + +++ Sbjct: 120 EIKRFYGREFELALKAREIIRGHLGIEISEAEVGFIALHIVNATMKQRTDHLMLSIKMIN 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L + F L Y E S+ Y+R + HL+F S R+L+ + D L K YP A Sbjct: 180 GILNTVSETFGLTYDEGSVQYERFLRHLQFFSQRVLDKSIAQSEDTFLFHLGKDQYPDAL 239 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C ERI I +Y +S AE +L +I + Sbjct: 240 ECTERIGAHIEQEYGCVVSDAEKGYLVYHIANLVH 274 >UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=C2Q5B4_BACCE Length = 283 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 177/277 (63%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH-ELNGRL 61 M I K+ NNNV +V + E +VMG+GI FQK+ GE I+ S ++K + L +++ +L Sbjct: 1 MLIKKVFNNNVALV-NRTGTEMIVMGKGIAFQKKVGEYIDESIVDKVFVLEKESQVSNKL 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L++ IP E +I+ ++++ + D+IY++LTDH FAI RFQQ ++ NPL Sbjct: 60 LQLINEIPTEHFELTTQIVEYIKKQISNSISDNIYLTLTDHINFAINRFQQGQIIRNPLF 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQL 179 W+I++ YP+E+ + ALTII + G +LP++E G IA+H+++AQ ME+ VT++ Sbjct: 120 WEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINAQQDNIVMEETIMVTKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +L+++ + F + E+SL+Y R VTHL++ ++R+ + I + D L Q VK++YP+ Sbjct: 180 VGGILKIVNYHFGIKLDEKSLNYNRFVTHLRYFAYRLSRNEQIVEEDSLLYQQVKESYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ CA++I + Y +K++ EI + I+I RV + Sbjct: 240 AYGCAKKIMALLKSNYNQKLTKNEITYFVIHINRVTQ 276 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 163 SAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI 222 + + E +L ++++ IK Q S + + Y L H+ F R + I Sbjct: 57 NKLLQLINEIPTEHFELTTQIVEYIKKQISNSISDN--IYLTLTDHINFAINRFQQGQII 114 Query: 223 NDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + L +K+ YP+ + + I ++ E +A+++ ++++ Sbjct: 115 RN---PLFWEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINAQQDN 167 >UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=D2C0F0_DICD5 Length = 279 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 160/274 (58%), Gaps = 2/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K+LNN++V+ DD RE +VMG+GIGF R G+ I IEK + S E Sbjct: 1 MIVQKVLNNSLVLSSDDDNREVIVMGKGIGFNSRPGDEIAQEKIEKLFVTQSFEKRSGYI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E LS IP EV+ IIS A +L K+++ I+ +L DH FAI+R ++ +++ N LL Sbjct: 61 EGLSAIPDEVIEMAAMIISRANLQLSSKVREQIFFTLADHLTFAIERSRKGIVIQNRLLP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +++R YP++F++ EA+ II ++ G++LP++E G IA HLV+ Q G+ + +++ Sbjct: 121 EVRRFYPQQFRVASEAVAIIRQQYGIELPEEESGNIAFHLVNGQSEGDDVAQAMQSVKML 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++ L+++ F ES++Y R +TH++F R+ E D L V + YP A Sbjct: 181 KDIFNLVQYHFKKEIDTESINYSRFMTHMQFFLQRLQEGEISTARDSFLLAQVIKEYPDA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 ++ A I ++ ++ + E+++L +++ R+ Sbjct: 241 YRGALLIRDYVKVRLDITLGGNELLWLTVHLVRI 274 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 10/135 (7%) Query: 150 PKDEVGF--IAMHLVSAQMSGNMEDVAGVTQLMREMLQL---IKFQFSLNYQEE--SLSY 202 P DE+ I V+ + G++ + E++++ I + +L + + Sbjct: 35 PGDEIAQEKIEKLFVTQSFEKRSGYIEGLSAIPDEVIEMAAMIISRANLQLSSKVREQIF 94 Query: 203 QRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPA 262 L HL F R + I + L V++ YPQ ++ A I QY ++ Sbjct: 95 FTLADHLTFAIERSRKGIVIQNR---LLPEVRRFYPQQFRVASEAVAIIRQQYGIELPEE 151 Query: 263 EIMFLAINIERVRKE 277 E +A ++ + E Sbjct: 152 ESGNIAFHLVNGQSE 166 >UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Enterobacteriaceae RepID=A1JND6_YERE8 Length = 277 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 109/274 (39%), Positives = 177/274 (64%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LNNNVVV D +E VV+G+G+GF K+ + ++ +GI+K + L + + Sbjct: 1 MRIQRVLNNNVVVAHDFSGKECVVIGKGVGFNKKPNDLVDEAGIQKIFRLDAENSFDKTH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + +P E+ I+ A +L + + S+Y SL DH FAI+R +Q V + N LLW Sbjct: 61 DAFQDLPEELFDIVLDIVKQATTKLDRKIHKSVYASLLDHISFAIERAKQGVHVRNMLLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+RLY EF +G AL I ++L V L +DE GFIA+HL+++Q G M D+ V+++++ Sbjct: 121 DIKRLYRNEFIIGISALENIKQKLNVDLAEDEAGFIALHLLNSQKDGTMPDIENVSKVIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L ++K+ F++ Y+EES+++QR VTHLKF S R+L + + +D SL V + Y ++ Sbjct: 181 DLLNIVKYHFNIEYEEESINFQRFVTHLKFFSHRLLSNTYVMTNDNSLHDVVAEKYSTSY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +C ++I FI Y R+++ E+MFLAI+IE VR Sbjct: 241 ECTKKINKFIKHDYGRELTSDEMMFLAIHIEHVR 274 >UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacterales RepID=B0K352_THEPX Length = 275 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 161/276 (58%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 Q+ K+LNNNV + DD+ E +V+G+GIGF KR G+ I +EK + + + Sbjct: 1 MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQE-RLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 SEL+ I +V+ + II++A++ + KL + I+I+L DH FAI+R + + NP Sbjct: 61 SELMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFD 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LY ++ + +AL +I++RL + LP+DE GFIA+HL +A + + + T+L+ Sbjct: 121 IEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALHLHAALENAGLSNTVKNTRLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++ I+ +S+ Y RLVTHL+F R+ ++A + + L ++K+ + +A Sbjct: 181 SQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTN---ELLVSIKKKFKKA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A +++ I Q+K+ E ++AI+I+R+ Sbjct: 238 YNIAMQVSKIIEDTLQKKVPEEETGYIAIHIQRLIN 273 >UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6K4_BIFBR Length = 297 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 150/278 (53%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D + RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLAKD-RGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVL-LPNPLL 120 +LL IP E++ + ++ ++L DH A++R + + +P PL Sbjct: 60 QLLGDIPPEIIRLISETMDEIGLSSEAAQSSTLVMALADHVCGALRRAKNGIPPVPYPLN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 +I+ LY +E+Q G L +++RL L E A+H V+A S G++ +T + Sbjct: 120 SEIRSLYKREYQQGCALLAALNRRLDDALDPSESVAFALHFVNAGFSTGDLSPTYMMTGV 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++++L +I+ +++ E S++ R +THL++L RI +H ++ E++ ++ +Y + Sbjct: 180 IQQLLAVIESTYNIKLDEHSVNVGRFITHLRYLFVRIHQHEQLSREPEAIVSSIMSSYAK 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A +CA IA I L+ ++ E+ +L +++ RV + Sbjct: 240 ASKCARLIASLIELRLDTTLTEDEVAYLTLHVARVTDQ 277 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 6/113 (5%) Query: 75 TCDRIISLAQERLGKLQDSIYIS---LTDHCQFAIKRFQQNVLL---PNPLLWDIQRLYP 128 +++++ + D ++ H ++ R Q+ L P ++ I Y Sbjct: 179 VIQQLLAVIESTYNIKLDEHSVNVGRFITHLRYLFVRIHQHEQLSREPEAIVSSIMSSYA 238 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 K + ++I+ RL L +DEV ++ +H+ N + + + Sbjct: 239 KASKCARLIASLIELRLDTTLTEDEVAYLTLHVARVTDQTNQNRSSDIPDHPQ 291 >UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFG1_9FIRM Length = 286 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 182/277 (65%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K+LNNNV+ + + ++ ++ G G+GFQKR G+ + + IE+ + L RLS Sbjct: 6 FHVKKVLNNNVIFSKNQEGQDIILTGLGLGFQKRKGDPVEAEKIERIFILKEEATGNRLS 65 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL IP++ D+I A+++L +L +IY++L DH +A++RF+Q +L N L+W Sbjct: 66 ELLKQIPIDYFYLADQIKQHAEQKLSKELNQNIYVTLCDHMYYAVERFKQGLLFQNQLMW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLM 180 +I+R YPKE+Q+ EA+ +++ L V+LP+DE F+A+H+++A+++G+ ++ V +T+L+ Sbjct: 126 EIKRFYPKEYQIALEAIKLMNSTLNVKLPEDEASFVALHIINAELNGHEIQSVIDMTRLI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + + +++++F +++ E SL+Y R + HLKF S R++ + + L V++N P+A Sbjct: 186 KGICSIVQYEFKIDFDENSLNYTRFILHLKFFSQRLMMNEPPAEEASFLYPQVQENMPEA 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +QC+ +IA++I Y I+ +E ++L I+IER+ E Sbjct: 246 FQCSRKIALYIQKSYNYTITKSEQVYLTIHIERLLSE 282 >UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC1_9FIRM Length = 288 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 169/282 (59%), Gaps = 7/282 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN++ VID++ E +V G+G+GF ++ + ++ + +EK Y + RL Sbjct: 1 MRIKKVINNNILCVIDEKGNEMIVAGKGLGFGRKVAQFVDPAQVEKVYRMEDKTGQRRLR 60 Query: 63 ELLSHIPLEVMATCDRIISLAQER-LGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ IP+E + + +I+ + L +S+ I+L DH FAI+R Q + NPL Sbjct: 61 ELVEQIPIEHLDLTEAMIAEIKAAIHQPLNESLLITLADHISFAIQRKAQGIEFKNPLAG 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 I YP E+QLG+ L ++ +R GV+L DE FIA+H+V+A+++ +M ++ +T+L+ Sbjct: 121 SILCYYPTEYQLGQRCLAMVKERFGVELSPDEAAFIALHIVNAELNTDMSEMYDITRLIE 180 Query: 182 EMLQLIKFQFSLN--YQEESLSYQRLVTHLKFLSWRILEHASINDSDES----LQQAVKQ 235 ++Q++++ + + ESL++ R V HL++ + R+ + + DS + + + + Sbjct: 181 GVIQVVEYYYRDRGAFDRESLTFHRFVVHLRYFAQRLFQGKLMTDSADESEAAFRALIAR 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 N + ++CA+ +A +I + + +S E+++L I+++RV + Sbjct: 241 NCKEHYKCAQCVADYIEKTWHQTLSQEELIYLTIHLKRVAGD 282 >UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 Tax=Lactobacillus rhamnosus RepID=C7TGE9_LACRL Length = 283 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 101/274 (36%), Positives = 174/274 (63%), Gaps = 1/274 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNNNV+V D+Q E+V MG+GIGF++ AGE ++ S ++K + L + +L S Sbjct: 1 MEIYKILNNNVIVTKDEQGFEQVAMGKGIGFKRSAGETLDPSLVDKIFYLKNSDLQEHFS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ +P +++ ++ I A +L + L S+++SL DH A+KR+++ L+ N L++ Sbjct: 61 SLINEVPYAILSVSEKFIDEAASQLKQKLNASLHVSLVDHIYHALKRYEKGQLISNSLIF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LYP+EF+L E L +I ++ GVQLP DE GFIAMHL++A+M+ M + + + Sbjct: 121 EIENLYPEEFELSEHFLQMIAEQEGVQLPVDEAGFIAMHLINAEMNEEMGTTVSIMKEVY 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L +IK+ + Y E SLSY RL+THLKF R+++ + + D L V + YP A+ Sbjct: 181 AILNIIKYSMDVEYDERSLSYYRLLTHLKFFVQRVMKGSMLASDDAELYMLVSRKYPDAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + A +I ++ + + E+++L I++ R++ Sbjct: 241 RVANKITKYVANAFHVVLPAEEVLYLMIHLNRLK 274 >UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Firmicutes RepID=A6LXA2_CLOB8 Length = 279 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 119/277 (42%), Positives = 186/277 (67%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K++NNN+V D+ +E +VMG G+GF+K+ GE I+ +EK Y+L + +L Sbjct: 1 MKIEKVINNNLVQSFDNNNKEVLVMGCGLGFKKKPGEIIDKDKVEKIYSLEDKNYSNKLI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IPLEV+ T + I+S A+ L KL D+IYI LTDH FA++R + + N LLW Sbjct: 61 ELLSDIPLEVIQTTNEIVSYARYSLGKKLNDNIYILLTDHISFAMERVNKGLQFKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 +I+R Y EF +G+EAL II+KRL V LP+DE IA+H+V+AQ++ N++D +T ++ Sbjct: 121 EIKRFYNHEFLIGKEALQIIEKRLHVDLPEDEAANIALHIVNAQLNSSNIDDTMSMTNMI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +L ++KF + L E SL Y+R +THLKF S RI I D D SL + +++ Y +A Sbjct: 181 QNILNIVKFHYKLELDEYSLHYERFITHLKFFSQRIFRGNEIEDEDTSLSKIMREKYKEA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++CAE+I ++ ++ +++ E+M+LA++I RV K+ Sbjct: 241 YKCAEKIKKYVKSEFNSELTDEEMMYLAVHINRVTKQ 277 >UniRef50_A4WFZ1 Transcriptional antiterminator, BglG n=1 Tax=Enterobacter sp. 638 RepID=A4WFZ1_ENT38 Length = 278 Score = 220 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + I K LNN++++V D+ +RE ++ G+GIGF +AG +I+ + +EK + S + Sbjct: 1 MITIKKSLNNSMLLV-DNDRREMILFGKGIGFGAKAGSQIDLTQVEKVFLPLSDLKSRHF 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L IP I++LA+ KL + +L +H FA++R + ++ N L Sbjct: 60 LSLTDTIPAAFFEISHEILTLARTLCGDKLNSVLLFTLAEHLHFAVERSRSGQVILNKLS 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 W+++R YP+E+ +G +A ++ + GV LP+DE IA HL++A + +L+ Sbjct: 120 WEVKRYYPQEYSVGMQARANVNAQFGVDLPEDEAVNIAFHLINASGQTDDSSAHQQVELV 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++++++ S +S++Y R +THL++ + R+L + E Q + ++ P A Sbjct: 180 NRIAEIVRYKLSKAIDTQSVNYMRFITHLRYFAERVLTGKIVVSETEDFYQELMRHRPDA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A I ++ +YQ + E+ +L+I+I R+ + Sbjct: 240 MTVAWVIRDYVQEKYQLTLPKDELTWLSIHISRLME 275 >UniRef50_C7GD80 Transcription antiterminator LicT n=5 Tax=Clostridiales RepID=C7GD80_9FIRM Length = 277 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 108/273 (39%), Positives = 178/273 (65%), Gaps = 1/273 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNNV+ D Q+E V+MG+GIGF+ GE I+ S IEK + + + L+ + Sbjct: 1 MVIQKVINNNVISAYDVNQQEIVIMGKGIGFKAHTGELIDESKIEKVFRIENENLSRQFQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELL +IPLE M IIS A + L +L +IYI+LTDH FAI+R Q + L N LLW Sbjct: 61 ELLENIPLEHMQLTSDIISYAIKNLNVQLNQNIYITLTDHINFAIQRQSQGIQLKNALLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++ Y +E+ +G+ A+ +++++LG + +DE GFIA+H V+A+ + + D +T +++ Sbjct: 121 ETKKFYHQEYLMGKYAVDLLNEKLGTEFTEDEAGFIALHFVNAEYNTTINDTFEMTNMIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L+L++ + + + EESL Y+R +THLKFL R+ H + D + + ++ YP+ + Sbjct: 181 KILELVRLEMGIEFDEESLHYERFITHLKFLVQRLYRHELLKDEEIEFARMMENKYPKEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +C++ IA +I +Y I+ EIMFLAI+I+RV Sbjct: 241 ECSKHIAEYIEKEYGSGIASEEIMFLAIHIKRV 273 >UniRef50_B9Y8L7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8L7_9FIRM Length = 283 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 95/278 (34%), Positives = 171/278 (61%), Gaps = 3/278 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +++ K+ NNN+++ D+ E ++MGRGIG+ + G+ + S I+K + +++H+ Sbjct: 1 MKLRVKKVFNNNILLAEDENLLEVILMGRGIGYAMKPGDPADESKIDKVFKITAHQQQED 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L+ IP+ + +I+ +AQ+ L + D IYI LTDH F IKR +QN L N L Sbjct: 61 FVKLMKEIPINHLELTKKIVEMAQKELNVQFDDVIYIGLTDHIHFVIKRAKQNEQLKNAL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQ 178 LW+I++ YP+EF +AL +I+ G+QL +DE FIAMH V+ Q SG + + TQ Sbjct: 121 LWEIKKFYPREFAASMKALELIEYSEGLQLTEDEASFIAMHFVNGQQSGEAIRETVEATQ 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++++L +IKF + ++ E S++Y R +TH++F RI ++++ D L + VK+ YP Sbjct: 181 IIQDILNIIKFHYKIDLNENSINYSRFITHIRFFLQRIRGSLNVSEDDY-LFEKVKEKYP 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ CA RI ++ + +++ E+++ ++I R+ + Sbjct: 240 DAYACASRIKTYLDAKLGVELTHEEMLYFMLHIRRLTE 277 >UniRef50_A9QSQ6 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ6_LACLK Length = 278 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 90/276 (32%), Positives = 160/276 (57%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+ NNN ++V D E+ VMG+GIGF+K+ GE ++ + I KE+ L Sbjct: 1 MRILKVFNNNALLVNDRFNNERFVMGKGIGFKKKPGEVVDVTQITKEFTFQKKSSRDSLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ +P E + +I A+E+ + S+Y+SL DH +AI R + + + NPL+W Sbjct: 61 EIYEQLPSEEIDLVAALIKEAEEQFHQTYFLSLYVSLADHIHYAISRTRDGISIKNPLVW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 ++++ Y KE+ L ++ L I+K +G+ L +DE IA+H V+A+ D +TQ + Sbjct: 121 EVKKFYAKEYALSKKYLIKINKDMGISLDEDEAAAIALHFVNARQEDSPFTDTFEITQFI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQ 239 ++L++++ +S + E+SLS+QR VTHL +L RIL+ + D L + V+ YP+ Sbjct: 181 DDILKIVRLYYSKEFDEDSLSFQRFVTHLHYLGQRILKGKPFKEMEDSFLFEQVQLKYPE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A +C E+I ++ + + EI +L ++++R+ Sbjct: 241 ASKCVEKILFYLSESRKTNLDIDEIAYLTLHVQRLI 276 Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 L+ +++ + QF Y Y L H+ + R + SI + L VK Sbjct: 69 EEIDLVAALIKEAEEQFHQTYF--LSLYVSLADHIHYAISRTRDGISIKN---PLVWEVK 123 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y + + +++ I I + E +A++ R+E Sbjct: 124 KFYAKEYALSKKYLIKINKDMGISLDEDEAAAIALHFVNARQE 166 >UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Bacteria RepID=D0KIH3_PECWW Length = 313 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 168/276 (60%), Gaps = 2/276 (0%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 + KILNN++V+ D E +VMG+GIGF + G+ ++ + IEK + L + Sbjct: 37 KAIKILNNSLVLSSDADNNEIIVMGKGIGFNSKTGDILDPAKIEKTFILKDGTSPREFAR 96 Query: 64 LLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L+ H+ E + ++II A +L +L + ++ +L DH FAI+R+++ + + N LL++ Sbjct: 97 LIEHVREEYVHIVNKIIDDANRQLHGRLSEQVFFTLIDHISFAIERYRKGISIQNRLLYE 156 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMR 181 ++R YP+EF + AL I++++ ++LP++E G IA HLV+AQ NME+ ++++ Sbjct: 157 VKRFYPQEFAIASRALNDINQQMTLELPEEEAGNIAFHLVNAQTDIQNMENTLQSVKMLK 216 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +I++ F + +ES++Y R +TH++F R+LE++ I+ +D+ + V + YP A+ Sbjct: 217 DIFNIIQYNFHIVIDKESINYSRFLTHMQFFIQRLLENSLIHSNDDFIFDQVTKEYPDAY 276 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +C+ I +I IS E+++L I+I R+ E Sbjct: 277 KCSRLIKDYIHNLLNIDISNDEMLYLIIHIVRITPE 312 >UniRef50_C7XXG9 Transcription antiterminator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXG9_9LACO Length = 281 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 95/279 (34%), Positives = 171/279 (61%), Gaps = 5/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI ++LNNN V+ + E ++MG GI + K+ G+ ++ S +E+ + L + + + Sbjct: 1 MQIKRVLNNNAVISENHSGVEVLLMGSGIAWNKKRGQDVDISKVEQTFLLKNPDTLNKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++ P++ + +RII+ A+ +L KL + IY++LTDH AI+R++ + L NPL W Sbjct: 61 EVVIDAPMDEVLIAERIINYAKIKLGRKLNEIIYVNLTDHLHGAIERYRSGIKLTNPLKW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS--GNMEDVAGVTQL 179 DI RLYP E+ +G +A+ ++ ++LG+ DE FIA+ + + + + +TQ+ Sbjct: 121 DIARLYPDEYDVGMKAVELVKRKLGIDFLDDEAAFIALSFLDVESTGGNEQNNAYQMTQI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL--EHASINDSDESLQQAVKQNY 237 + E+ +++K F + E+SL+Y R +THLKF + RIL H +D+D L +++ + Y Sbjct: 181 VTEVEKIVKDFFHTEFDEQSLNYFRFITHLKFFAQRILTDTHYPDDDTDRELMESLSRRY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+A CA+++ FI +Y+ IS E+M+L ++I R+ K Sbjct: 241 PKALTCAQQVHDFIQRKYRFTISDQEVMYLTVHIARLVK 279 >UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1K5_9CLOT Length = 273 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 73/273 (26%), Positives = 151/273 (55%), Gaps = 6/273 (2%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 ++ K+LNNN V+ +D ++++E +++G G+GF K+ G+R S + Y L E + Sbjct: 1 MYRVIKVLNNNGVLALDMEKKQEVILLGNGVGFGKKMGQRFGGSPDARRYELVKKETSA- 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + ++ I + RII A+ LG ++ I I++ DH A+ R ++ LPNP Sbjct: 60 -LQAVNGIDPVYIEVTARIIEAAEGLLGPIRHDILIAMADHIALAVSRAKEGCELPNPFS 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ +E++ + +I + LGV++ +DEV +I +H+ N+ + +L+ Sbjct: 119 QDIRALFSQEYEAALKGRELIRQELGVEISEDEVSYITLHIHGGLSDENVSQSLELARLV 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ ++ ++ + SL Y RL++HL+++ R + ++ ++ ++N+P+A Sbjct: 179 QDGIRQVEEGMGMTLPAASLGYNRLMSHLRYMIARTRKKEQ---TNLNMGDYARENFPRA 235 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 ++ A ++ IG + + ++ EI FLAI+I+R Sbjct: 236 YEVAAQVCEDIGRKLKCPVAQEEIGFLAIHIQR 268 >UniRef50_C9PC09 Beta-glucoside bgl operon antiterminator BglG family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC09_VIBFU Length = 279 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 159/278 (57%), Gaps = 3/278 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHE-LNGR 60 I ++LNNNVV D+ RE ++ G+G+GF+ + G+ I+ EK + L+ + + R Sbjct: 1 MFTILQVLNNNVVSAADESGRELILTGKGLGFKAQPGKAIDPHVAEKVFVLNQGDATSER 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L L+ +PLEV+ + I A++ L + + +++SL+DH FAIKR + + +PNP Sbjct: 61 LKVLMESLPLEVVQMTEFICDEAEKALNRKFGNGLFVSLSDHLDFAIKRSKDGLSIPNPF 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 W+I+ Y KEF+ E + I GV L K E IA+H+++A + N+ D +T++ Sbjct: 121 EWEIRSFYDKEFKFAEGIIQKILLNWGVLLEKSEACSIALHIINA-DNSNLNDFKSLTKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++L ++K+ F++ E S +Y R VTHLKF + RI + I + D L + + + Sbjct: 180 VYQILNIVKYVFNVELDENSQNYHRFVTHLKFFAQRIGKKEVITNHDSLLSDLLIKELTK 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 QC + I+ F+ Y +S +E ++L I+I+RV + Sbjct: 240 THQCVDTISEFVRKTYGHPMSDSEKLYLVIHIDRVLND 277 >UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=Paenibacillaceae RepID=C0ZH78_BREBN Length = 285 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 154/281 (54%), Gaps = 7/281 (2%) Query: 2 NMQITKILNNNVVVVIDD-QQREKVVMGRGIGFQKRAGERINSSG--IEKEYALSSHELN 58 IT++LN+NVV+V + +E V+ G+GIGF + G I + +EK + L + Sbjct: 8 TYAITRVLNHNVVLVEEPGSGQEIVLFGKGIGFGAKPGNTIPAHDLRVEKRFRLENESHQ 67 Query: 59 GRLSELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPN 117 + +LS + V+ + II+ +A E +L + ++++L DH QFAI R + + N Sbjct: 68 KQYQNILSQVDPAVVGIAEEIIALIASEITPELNEHVHVALPDHIQFAIYRLNNGMEIVN 127 Query: 118 PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 P L++IQ LY KE+ L A +I + +P E+GF+A+H+ SA ++ T Sbjct: 128 PFLFEIQTLYTKEYALANRAADMIKNAFDLDIPDSEIGFLALHIHSAISYVPVKKAVQFT 187 Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++ E++ LI+ Q ++ + ++ Y RL+THL+F RI + I + L VK Sbjct: 188 NIITELVSLIEEQTAITIERSTIDYVRLITHLRFAVERIRQQKFIKN---PLLDRVKTTM 244 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 P+A+Q A +A +I + + + E+ ++A+++ R+ +++ Sbjct: 245 PEAYQLATELAQYISTRLEIAVPEDEVGYMALHLYRLLQQN 285 >UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterminator n=7 Tax=Firmicutes RepID=Q18DC6_CLOD6 Length = 278 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 160/278 (57%), Gaps = 2/278 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 MN I K+LN++VV+V D + E +++G+GIG+ K+ GE I S + + + + + Sbjct: 1 MNYIIKKVLNSSVVLVHDTKDNEFILLGKGIGYGKKTGEYICGSNDNQMFVPVENTKSKQ 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL+ IP++++ II A++ L ++Y+ L DH FAI+R ++ + + N + Sbjct: 61 FLELMDDIPVDILKITQEIIVEAEKLLNSSFNKNLYLILADHFNFAIERMRKGIKITNRV 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQ 178 W+I+ YP EF++G A+ ++++RLG+QLP++E IA H +A GN D + Sbjct: 121 FWEIKNYYPNEFKVGMVAIYMVEERLGIQLPEEEAANIAFHFANAMASDGNSYDTIKYAK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ E++ + F + ++S+ Y R +TH+KF R + ++ D+ L +K++ P Sbjct: 181 VIGEIINIFIFSLNRTLDKKSMHYMRFITHIKFFVERFFSDSMLSSGDDLLFNQMKRSNP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A ++ F+ +Y +K++ EI FL ++I RV++ Sbjct: 241 KEMLIALKVRDFLEKKYGKKLTNEEIAFLVVHIARVKQ 278 >UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clostridiales RepID=A4J1C8_DESRM Length = 282 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 153/275 (55%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 I ++L+NN V+ + ++ +++G+G+GF +++G+ +++ EK Y + + + Sbjct: 8 FTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKAL 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + V+ II LA+ +LG+ L ++++L DH F + R Q + + NP L Sbjct: 68 ALMEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLA 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ +YPKEF + ++ +I +++ + +P +E+GFIA+HL SA+ + ++ +++ Sbjct: 128 EIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSARHNRHVSQSLKHAEVIN 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ I+ QF + L Y RL++HL+ R++ +I + +KQ + ++ Sbjct: 188 RAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIEN---PFLDKLKQEFSNSY 244 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A +++ + + EI +LA++IER+R+ Sbjct: 245 EIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRR 279 >UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillaceae RepID=GLCT_BACSU Length = 281 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 159/276 (57%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K+LNNNV++ + E V++G+GIGF K+ + I G +K + L + + Sbjct: 5 FTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFK 64 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL ++ +++ + +I R L + I+I+LTDH FAIKR QQ + NP L Sbjct: 65 KLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLM 124 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + Q LYP+E+Q+ +E + +I+++ G+ LP+ E+GFIA+H+ SA + + +V +QLM Sbjct: 125 ETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPLSEVNQHSQLMA 184 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +++++I+ F + +ES++Y RL+ H++F RI + + ++ + +K YP + Sbjct: 185 QLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML-LLKNEYPLCY 243 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A ++ + ++ + AE ++L +++ R+ + Sbjct: 244 NTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNK 279 >UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ73_9FIRM Length = 273 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 151/277 (54%), Gaps = 7/277 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI---EKEYALSSHELN 58 ++ K LNNN ++ + ++ RE +++G+GIGF K++GERI S K Y L + + N Sbjct: 1 MFRVIKPLNNNGLLALTEEGREVILLGKGIGFGKKSGERIESLTCLPQAKVYHLVTDDEN 60 Query: 59 GRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 L ++ + + R++ A++ + D I + + DH A++R ++ + LPNP Sbjct: 61 SALQR-VNGLDPHAVELAARVLDEARKSFPAMTDDILLPMADHIAMALERCRRGIRLPNP 119 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L DI ++P E+++ E+ L I++ G+ LP +E G++++H+ + N D + Sbjct: 120 LQHDIMVMFPDEYRIAEQGLHAIEREEGLSLPPEEAGYLSLHIHAGISEQNAGDSLTNIR 179 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L + + I+ + ++ + L Y RL++H+ ++ RI + + + V++ YP Sbjct: 180 LAADCIAKIETELGISLRRTELKYTRLISHVCYMILRIRAQEEV---PLQMDEYVRKMYP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +A+Q AE++ + + IS AE+ LAI+I+RV Sbjct: 237 RAYQLAEKLCKALEEKLCLPISSAEVTLLAIHIQRVL 273 >UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus RepID=SACT_BACSU Length = 276 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 97/275 (35%), Positives = 170/275 (61%), Gaps = 5/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K+LNNN ++ + +EK+VMG GI FQK+ + I + +EK + + N + Sbjct: 1 MKIYKVLNNNAALIK-EDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDE--NEKFK 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L +P E + + IIS A+ L L D I+I+L+DH FAI+R Q +L+ N LL Sbjct: 58 QILQTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLH 117 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+ LY KE+++G A+ + + LGV LP+DE G+IA+H+ +A+M +M T ++ Sbjct: 118 EIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKMDAESMYSALKHTTMI 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +EM++ IK F+ E S+SYQRLVTHL++ R+ + +++ DE + +++ Y A Sbjct: 178 KEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +QCA +A F+ +YQ + +E ++ ++++R++ Sbjct: 238 YQCALELAEFLKNEYQLHLPESEAGYITLHVQRLQ 272 >UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMV1_9FIRM Length = 272 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 151/277 (54%), Gaps = 6/277 (2%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 +I K+LNNN ++V+D + +RE +++G GIGF R GERI S+G K Y L + + + Sbjct: 1 MYRIIKVLNNNGILVLDVESRREVILLGNGIGFGHRTGERIESTGQAKRYELVTGKTSA- 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + ++ I + RII A+ +G L I I + DH A+ R ++ LPNP Sbjct: 60 -LQQVNSIEPVYIEAAGRIIEEAEGTMGVLSHDILIPMADHIALAVSRAREGRELPNPFR 118 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ E+Q + + II + GV + +DEVG+I +H+ + N+ + +L+ Sbjct: 119 HDIKALFSSEYQSAMKGVAIIRELTGVTISEDEVGYITLHIHAGLSEENVAAAMDMARLV 178 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ + I+ + N +SL Y RL +H++++ R + + +Q + ++P+ Sbjct: 179 QDSMHQIESRMGFNLASDSLGYNRLASHVRYMIARARKGER---AGLDMQDYARTSFPKP 235 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ AE++ + + ++P E FLAI+I+RV ++ Sbjct: 236 YEVAEKVCRDMEKRLGLPVAPEETGFLAIHIQRVMQQ 272 >UniRef50_C4LKZ8 Beta-glucoside operon antiterminator n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKZ8_CORK4 Length = 290 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 139/285 (48%), Gaps = 17/285 (5%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LNNNVV+ D E V+ G G+GF K+AG+ ++ S +++ + + Sbjct: 1 MKIVRVLNNNVVLATRDDGGEVVLTGWGLGFGKKAGQPVDKSNVKQVFVPEHGRNVDNMG 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSI-YISLTDHCQFAIKR-------FQQNVL 114 LL+ + L+ + ++ L +S I+L DH Q ++ R Sbjct: 61 SLLASLNLDYVDLATNLVDGVAGSLVPHPESATVIALADHIQMSVTRQGLADAHANDGH- 119 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTI----IDKRLGVQLPKDEVGFIAMHLVSAQMS-GN 169 PL +++ LYP E+++ E L + +R LP E I +HLV+A + Sbjct: 120 ---PLEAEVRHLYPDEYRVAERMLAETNAWLARRRQPPLPHAEATAITLHLVNAAFHTDD 176 Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + D +T L ++ ++ + +S++ R +TH+++ R+ +N+ L Sbjct: 177 LSDTYTMTGLFSQLFDIVDSSLGITMDRKSVNAARFITHMRYFFVRVRNGNQLNEGMSVL 236 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + ++ Q++P A CA+R+A + L+ +++ E +LA+++ R+ Sbjct: 237 RDSLGQSHPDAVLCADRLASVLELRLDTELTDDERAYLALHVARL 281 >UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SK7_SYMTH Length = 275 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 146/275 (53%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+ K LNNNV++ D +E VV+GRG+GF+ R + IEK + L R Sbjct: 1 MRPLKALNNNVLLAYDPACGQEVVVVGRGLGFRVSGPIRPDDPRIEKVFRLDESRNRKRF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + +V+ + I++LA R G L + +++L +H + R ++ + +PNP L Sbjct: 61 LRLTETLSGDVIGVAEEILNLAAARFGPLGEEAHLTLAEHLAATVDRVRKGMPIPNPFLA 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 IQ LYP+E+ L +A+ +I RLGV LP++E G +A+HL+ A + + +A L+R Sbjct: 121 QIQLLYPEEYALAGQAVEMIASRLGVTLPEEEQGILALHLLGAWRRESPKVMARHQALIR 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E + + +++ ++ R++ HL+ I+ + + + ++ YP+ + Sbjct: 181 ESAAFLAAEAGISWSDDDPRLSRVLLHLRLAIDLIVSGKAETN---PVLDRIRSEYPEEF 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A R+ ++ + +R +S E+ +LA+++ R++ Sbjct: 238 ARARRLGDYMAQRLERPVSDDEVGYLALHLLRLKN 272 >UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALQ6_SEBTE Length = 281 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 175/279 (62%), Gaps = 4/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYAL--SSHELNGR 60 M+I K+LNNNVV V + E ++MG G+ F K+ G+ ++ S IEK + L + Sbjct: 1 MKILKVLNNNVVTVKTEAGEEVIIMGCGLAFGKKRGDNVDESKIEKIFTQTREDKNLYKK 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L + + IP E + ++I+ LA+E+L L D+IYI+L+DH FA+KRF L N L Sbjct: 61 LEDTIERIPAEYIDITEKIVKLAEEKLQMKLSDTIYITLSDHIYFAVKRFGDGQSLKNIL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 W+I+ Y E+ +G+EAL II + + LP DE GFIA+H+V+A+++ NM +V +T++ Sbjct: 121 FWEIKSSYKDEYLIGQEALKIIKDTVDLSLPDDEAGFIALHIVNAELNENMMNVMIITKI 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYP 238 ++E+ ++K+ F++ EE+ +Y R + HLKFL+ R+L + + N +D+ L ++ +Y Sbjct: 181 IKEITNILKYHFNVELDEENQTYYRFIVHLKFLAQRLLNNTTCNHSNDDELFNVIRASYK 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ C +I I Y S E+++L+I+IE++RKE Sbjct: 241 ESFACTVKIFEHIKKNYNYSFSRDEMVYLSIHIEKLRKE 279 >UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF6_9ACTN Length = 287 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 151/272 (55%), Gaps = 4/272 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +QI K+ NNN V I D ++ ++ G GIGFQK G+ + + IEK Y E + + Sbjct: 12 VQIVKVFNNNAVASITDDGQDVILTGAGIGFQKHTGDAVEENAIEKRYYFHDGE-SDSIY 70 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +H P+E I+ A++RL L+D + I+LTDH FA++R + N + Sbjct: 71 GLFAHTPVEFFNISKSIMDEAEKRLHIVLKDQVLIALTDHIVFAVERARNGEGFSNLMFS 130 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ LY +E+++G + ++++ LG++LP+DE FIA+H+++ Q + V L+ Sbjct: 131 EVRGLYRREYEIGLWGIHLVEEALGIRLPEDEASFIALHILNGQSDLSATAVLDTIHLVS 190 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNYPQ 239 +Q+I+ + + + + LSY RL THLKFL+ RI + D D+ + + + P Sbjct: 191 GCIQVIEELYGITFDSDELSYIRLTTHLKFLAQRIFSGTTDEDGFFDQQMFDLLCERNPL 250 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 A +CA +I+ F+ + +S E +L I++ Sbjct: 251 AHECARKISAFLKSDFLYSLSDREEFYLMIHV 282 >UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes RepID=C9XQT4_CLODC Length = 287 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 110/279 (39%), Positives = 186/279 (66%), Gaps = 2/279 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M I KILNNNVV+ +DD E +VMG+GIG+QK G I+ + + K + +S+ E++ + Sbjct: 6 IIMIINKILNNNVVITLDDNDEEVIVMGKGIGYQKSKGNLIDKTKVNKVFRISNKEISNK 65 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L ELL++IP+E M II AQ +L K L +SIYISL+DH AI+R ++ + + N + Sbjct: 66 LQELLNNIPIEHMKLSSEIIEYAQIKLNKKLNESIYISLSDHTYSAIQRMKEGINVKNAI 125 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 LW+I+R Y +EF++G +AL II+ + G++LP+DE GFIA H+V+AQ+S + +T+L Sbjct: 126 LWEIKRFYKEEFEIGMKALDIIENKTGIKLPEDEAGFIAFHIVNAQLSEGHTLASDITKL 185 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNYP 238 ++E+L ++++ F + + EES+ Y R + HLKF + R+L ++ ++D+ L +K Y Sbjct: 186 IQEVLSIVRYHFRIEFHEESVFYYRFIMHLKFFAQRLLLDSAHEGETDKELLSIIKSKYN 245 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + ++C +I FI QY ++ E+++L I++ +V K+ Sbjct: 246 KEFECVVKIKNFIKKQYNYILTDDELIYLTIHLAKVVKD 284 >UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 Tax=Bacilli RepID=A8FJ69_BACP2 Length = 282 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 154/277 (55%), Gaps = 2/277 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K+LN++VV+ D Q+E V+ GRGIG+ ++ G+ I ++ + + Sbjct: 1 MFKIKKVLNSSVVLAEDQNQQEMVLFGRGIGYGQKPGQMIEEKKADQVFMSVDNMRAKEF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LL +P E + RI+ A++RL L +Y +L DH FA++R ++N+ + N + Sbjct: 61 LQLLDSMPQEFIDLTQRIVQYAEKRLNSSLNSGVYFTLMDHLNFAVERHKKNINITNRVY 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 W+I+ Y +EF++G+ AL +++ L +QLPK+E IA HL++A + +D ++ Sbjct: 121 WEIKNYYTEEFEVGKYALELVNDTLSIQLPKEEAANIAFHLINALGEESDSKDSMKYAKM 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ L+++ ++ +E++ Y R +TH+KF R + ++D + L + + YPQ Sbjct: 181 IGSIVNLVRYTLNMKMDQENIHYSRFITHVKFFVERFYANKLLSDQENELFEQIAHLYPQ 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A A +I +I + I E+ +LA++I R+ Sbjct: 241 AMDVAFKIKDYIKQVHSIVIPNDELTYLAVHIHRLMS 277 >UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 Tax=Listeria RepID=Q71VY8_LISMF Length = 281 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 99/275 (36%), Positives = 180/275 (65%), Gaps = 2/275 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I +ILNNN+V ID+ +E +++G+G+GF + G+ IN S IEK + L + + Sbjct: 4 LRIERILNNNIVSAIDEDAQELLILGKGLGFNSKVGDPINESKIEKVFELKD-DTMDKFK 62 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ IP++ + D I+ L + + + D IYISL+DH FA +R Q+NV++ NPL W Sbjct: 63 MIVNEIPIQFLEVTDDIVKLFKMKTTKDISDVIYISLSDHLYFATQRLQENVVIENPLSW 122 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++R Y +E+ + +EA +++ +L ++LP E+ IA+H V+A++ +M DV + QL++ Sbjct: 123 EVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFVNAEVDSDMNDVTHIMQLIQ 182 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 E++ +IK+ F++ + EES +Y R +THLKF R++ +I++ DE L Q VK++ + Sbjct: 183 EIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGETIDEMDEFLYQTVKKSRGAIF 242 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C ++I +F+ YQ +S +E +LA++IER+ K Sbjct: 243 ECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLK 277 >UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ76_ENTFA Length = 285 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 160/276 (57%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ +ILNNNV ++ E +V +GI F+K+ G+ ++ ++K + L S ++ S Sbjct: 1 MKVKQILNNNVAILTKGTN-EVIVYSKGIAFRKKVGQSVSKEEVDKVFVLDSADVLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL++ + II A+E K D +Y++L DH +A+KR ++ + NPLLW Sbjct: 60 YLLANTEESLFEIVRSIILRAEELFQKKATDYLYLTLLDHIDYALKRGKKGQYISNPLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +++R YPK +QLG E + ++K V P+DE IA+HLV+ Q N ++ VT++M Sbjct: 120 EVRRYYPKSYQLGVEVVERLNKEYNVSFPEDEAASIALHLVNIQEAVQNSQENEKVTEIM 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++ ++++ ES++Y R + HL++ RIL + + +++D L Q + Q YP+A Sbjct: 180 KDIVSIVQYHLGAPMNHESINYTRFMQHLQYFVQRILTNDTYSENDSELYQQISQLYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + ++I +++ + + IS E +L ++I R+ + Sbjct: 240 YGAVKKIELYVIGTFGKLISEDEKTYLMMHIHRMTE 275 >UniRef50_C5EP68 Transcription antiterminator n=4 Tax=Clostridiales RepID=C5EP68_9FIRM Length = 281 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 169/276 (61%), Gaps = 1/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++LN N VV +D +RE +V G GIGFQK+ GE++ I+K Y L S E + RL Sbjct: 1 MKIIRVLNTNAVVTLDKDRREVIVTGPGIGFQKKKGEQLAEELIDKTYCLRSGEDSRRLQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +++ + + + R++ A+ K+ D +YI+LTDH A++R + + L N + D Sbjct: 61 QIVQSVSEQYLGIAGRVVDAARNEGLKVNDVLYITLTDHINSAVERLRSGIALKNMMKMD 120 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN-MEDVAGVTQLMR 181 ++R Y KE+ +G+ A+ + + G+ L DE FIAMH+V++++ + M D+ +T+LM Sbjct: 121 MRRFYEKEYAIGQMAVGRVLEETGIDLGDDEAAFIAMHIVTSELDNSKMMDIQKITELMN 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +LQ+++F F + + E+S+SYQR VTHLKF S R+ +H + DS + + Q + +A+ Sbjct: 181 AILQIVRFHFKIEFHEDSVSYQRFVTHLKFFSARVFDHGAYQDSMKEIYQVLVAQNEEAY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++A FI QY +S E ++L I+++R+ E Sbjct: 241 SGVRKVADFIKKQYSYTLSVDEQLYLLIHLKRILDE 276 >UniRef50_Q8GGK1 Transcription antiterminator protein n=2 Tax=Corynebacterium glutamicum RepID=Q8GGK1_CORGL Length = 289 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 153/284 (53%), Gaps = 10/284 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ ++LNNNVV+ I D E V+ G G+GFQK+ GE ++ S + + + ++ ++ Sbjct: 1 MKVLRVLNNNVVLAIKD-GAEVVLTGWGVGFQKKPGEDVDQSKVTQVFVPENNRDADHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLL---PNP 118 LL+ +PLE + +I+ L + + ++L DH Q A+KR L PNP Sbjct: 60 SLLAEVPLEYLDLSTELIASVSAELDSPVGSATVVALADHLQMAVKRNGLEPELTSKPNP 119 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQ----LPKDEVGFIAMHLVSAQMS-GNMEDV 173 L ++ LYP+E +L E L + L + LP EV I++HLV+A ++ + Sbjct: 120 LSAEVHHLYPEETRLATEILERTNNWLAEKGTPPLPPAEVVAISLHLVNAGFRTEDLAET 179 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +T + ++ ++I F + +S++ R +TH+++ R+ +ND L+ ++ Sbjct: 180 YVMTGVFEQLFEVIDSSFGITLDRQSVNAARFITHMRYFFVRVHHDGQLNDGMSVLRNSL 239 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + ++P + CAER++ + L+ ++S E +LA+++ R+ ++ Sbjct: 240 EISHPDSVACAERLSQILSLRLGAELSSDEQTYLALHVARLAED 283 >UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exiguobacterium RepID=B1YKV9_EXIS2 Length = 285 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 147/277 (53%), Gaps = 3/277 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGR 60 + K+LNNNVV+ +E +++ +GIGF ++ G+++ + +EK Y L + + Sbjct: 5 MYHVIKVLNNNVVICSTGANQEVIILAKGIGFGRKPGDQLTDLDKLEKVYTLKDKDEQAQ 64 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ H+ +A + I+S+ + R ++ + I+I LTDH F KR +Q + + NP Sbjct: 65 YKALVGHLDENFIALMNEIVSMIETRFGKRVDEHIHIGLTDHLTFTFKRLEQGMEVTNPF 124 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L + + LYP+E+ L EE + I + LP E GFIA+H+ SA ++ +V QL Sbjct: 125 LAETEALYPEEYALAEEIVEFISAEMNFYLPPAETGFIALHIHSATNFKDVLEVNRHHQL 184 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + I+ + + +SL Y+RL+ HL+ R+ + + E +++ +++ YP Sbjct: 185 VGLIASHIEQRLQIKIDRKSLDYKRLIRHLRSAIERVSNGEYLE-APEKVEKLLREEYPL 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A + + Q ++ + E +L ++++R+ + Sbjct: 244 CYDTAWELMSIMERQLKKAVPRGEATYLTMHLQRLVQ 280 >UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillaceae RepID=A4ILQ1_GEOTN Length = 298 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 154/276 (55%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ K LNNNV++ E V++G+GIGF K+ G+ I S +EK + L + + Sbjct: 18 FRVEKALNNNVLIASHPAYGEVVLLGKGIGFGKKKGDEIAESTVEKCFVLKNEREQEQYK 77 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL + E +A + +I ++R+ L + I+++LTDH F +KR +Q + + NP L Sbjct: 78 KLLPELSEEFIALMNEVIQHIKQRVGVPLNEHIHVALTDHIAFTLKRLEQGLDVKNPFLV 137 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LYP E+++ E +I +LGV LP+ EVGFI +H+ SA ++ + +QL+ Sbjct: 138 ETKSLYPLEYEIAAEVAELIGDKLGVALPEGEVGFITLHIHSAISKQSLAEANQYSQLIA 197 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++++++K Q ++ ES+ Y R V HL++ R+ + + L + +K+ YP + Sbjct: 198 KLVEIVKQQLGVDIDRESIHYLRFVRHLRYAIDRLKKGEKVEKPKN-LSKILKEAYPLCY 256 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A ++ + Q AE ++L ++++R+ ++ Sbjct: 257 NLAWKLVKVMQQTLQLPADDAEAVYLTLHLQRLAEK 292 >UniRef50_C6DD15 Transcriptional antiterminator, BglG n=6 Tax=Enterobacteriaceae RepID=C6DD15_PECCP Length = 279 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 146/276 (52%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ K LNN++++V D +Q+E +++G+GIGF R G I+ + +E+ + + + Sbjct: 1 MIKVKKALNNSMLLV-DHEQQEMILLGKGIGFGARPGSLIDVTHVEQVFIPLENLKSRHF 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L IP I++LAQ + KL ++ +L +H FA++R + N L Sbjct: 60 LSLTDTIPAAFFDITHEIVTLAQSQYAEKLNSVLFFTLAEHLYFAVERSKTGNHFVNKLS 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 W+++R Y KE+ +G +A + R V LP DE IA HL++A S + D QL+ Sbjct: 120 WEVKRYYQKEYAIGVQAKDRVSARFNVMLPDDEAVNIAFHLINAAGSAEIADAHQQVQLV 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++++++ + N ++ Y R +THL++ S R++ + Q + ++YP+A Sbjct: 180 NRLAEIVRYKLNKNIDVNAVDYLRFITHLRYFSERVIARKIAPGRTDDFYQELLKHYPEA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + I ++ +YQ + E+ +L I+I R+ + Sbjct: 240 MAISWAIRDYVQEKYQMALPKEELTWLTIHISRLAE 275 >UniRef50_A6LYH3 Transcriptional antiterminator, BglG n=6 Tax=Clostridium RepID=A6LYH3_CLOB8 Length = 276 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 102/279 (36%), Positives = 179/279 (64%), Gaps = 9/279 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNN ++ D ++E V+MGRG+GF+K G++++ + IEK + L + + + Sbjct: 1 MIIKKIFNNNAILAKDLSKQEIVIMGRGVGFKKSVGDQVDENLIEKTFILKQKDASEKFK 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP E ++ C II A+ L +L D IYI+LTDH +A+K F + + PN L+W Sbjct: 61 LLLEDIPTEHVSLCYDIIEYAKNMLSVELNDYIYITLTDHISYALKLFDEGLNRPNALIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN---MEDVAGVTQ 178 +I++ YPKEF++G +AL +I +LP+DE G IA+HL++AQ + + +ED+A T+ Sbjct: 121 EIKKFYPKEFEIGLKALDLIQSETNKKLPEDEAGNIALHLINAQTNNSGNKVEDIAHQTK 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNY 237 +++++L +IK+ +++ E+SL+Y+R VTHL+F R+ ++ + + D+ L + VK Y Sbjct: 181 MIQDILNIIKYTYNIALNEKSLNYERFVTHLRFFFQRLSKNEKMEKEEDDFLLKQVKTKY 240 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A++C +I ++ ++S E ++L I+I+RV + Sbjct: 241 KKAYECMLKIQKYLEK----ELSDEEQLYLTIHIQRVTQ 275 >UniRef50_C0XP64 BglG family transcriptional antiterminator n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XP64_9CORY Length = 287 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 144/281 (51%), Gaps = 7/281 (2%) Query: 3 MQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 MQI ++ NNNVV+ + E V GRGIGF K+ G+ ++ + + + + + Sbjct: 1 MQILRVFNNNVVLARSGEHGGEVVATGRGIGFGKKQGDVLDPATVTRVFVPAEGRDPDHS 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSIYIS-LTDHCQFAIKRFQQNVLLPNPLL 120 +++L+ +P E +A + ++ ++DH +FA R L PL Sbjct: 61 AQMLAGLPAERVAQVAAALEAVGAPADSRNRLTLVTAISDHIEFAAARAASGEELNYPLR 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGV----QLPKDEVGFIAMHLVSAQMS-GNMEDVAG 175 ++ LYP+++++G E L I++R +LP E +A+HLV+A S G++ Sbjct: 121 SEVLHLYPRQYEMGVELLAEINRRQRAAGAAELPDSEATALALHLVNAGFSTGDLAQTYQ 180 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +T ++++ML+++ S+ S+S R +TH+++L R+ ++ L + + Sbjct: 181 MTGVIQQMLEIVAAGLSITLDTASISVARFITHVRYLLVRLSHGRQLDHDQSPLTRQLLD 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 YP+ CA ++A + L++ ++ +I +L ++I R+R+ Sbjct: 241 AYPREVACARQVATVVELRFDCALTEDKIAYLGLHIVRLRE 281 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Query: 75 TCDRIISLAQERLGKLQDSIYIS---LTDHCQFAIKRFQQNVLLPN---PLLWDIQRLYP 128 +++ + L D+ IS H ++ + R L + PL + YP Sbjct: 184 VIQQMLEIVAAGLSITLDTASISVARFITHVRYLLVRLSHGRQLDHDQSPLTRQLLDAYP 243 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 +E + T+++ R L +D++ ++ +H+V + + M Sbjct: 244 REVACARQVATVVELRFDCALTEDKIAYLGLHIVRLRETQRMSQ 287 >UniRef50_A4VWG8 Transcriptional antiterminator n=59 Tax=Bacteria RepID=A4VWG8_STRSY Length = 302 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 177/276 (64%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ++LN+N V+ +++ + ++ G+GI F K+ G+ I S IEK + L + + R + Sbjct: 24 MIIKRVLNHNAVIAQNNKNVDILLFGKGIAFGKKVGDAIPPSSIEKSFLLKNSDNMNRFT 83 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL +P+E++ C++II+L + L + IYI+LTDH +I+R ++ V++ NPL W Sbjct: 84 ELFIDVPIELVYVCEKIINLGKITLGNHFDEIIYINLTDHINSSIERHKEGVVVTNPLRW 143 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I + Y +EF+LG++AL+II K L V+LP DE FIA+H V+A + ++ +T ++ Sbjct: 144 EIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHFVNANLENIFQESYRITGIIM 203 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQA 240 ++ Q+I+ +S + ++S+ Y R +TH+K + R++E +D D+ L + +K+ YP+ Sbjct: 204 KIEQIIQDYYSTEFNQDSIDYYRFITHVKLFAHRLVEGNEYHDEDDVDLLELMKKKYPRE 263 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +QC R+A FI L+Y +SP+E+++L +I R+ K Sbjct: 264 YQCGTRVADFIRLEYDYLLSPSELVYLIAHIRRLTK 299 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 44/117 (37%), Gaps = 5/117 (4%) Query: 162 VSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS 221 ++ ++ + + +++ L K ++ + + Y L H+ R E Sbjct: 79 MNRFTELFIDVPIELVYVCEKIINLGKITLGNHF--DEIIYINLTDHINSSIERHKEGVV 136 Query: 222 INDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + + L+ + + Y + ++ ++ I ++ E F+A++ E+ Sbjct: 137 VTN---PLRWEIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHFVNANLEN 190 >UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XN38_CLODC Length = 293 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 178/276 (64%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I +I NNNVV+V+D+ ++E ++ G GIGFQK+ G+ I+ S IE+ + + ++ Sbjct: 14 MIIQQIYNNNVVLVLDENIKKELILTGCGIGFQKKKGQEIDKSKIERTFVIQDESFLDKI 73 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S+L S + + II+ A+E L KL + IY++LTDH FAIKR+ +N+ + N LL Sbjct: 74 SKLASQVDEKFFEISTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIKNDLL 133 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+R++ KE+++G+ A+ I+K V+ P DE GFIAMH+V++ G+ ++ +T+++ Sbjct: 134 HEIKRIHKKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSKESLLITKIV 193 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +I++ + + ++E+ ++Y RL+THLKF + R+++ IND++ + +K Y + Sbjct: 194 KDILNIIRYYYRVEFKEDDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVKYEKD 253 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + CA +I + Y +S E+++L ++I+RV Sbjct: 254 YDCAYKIKTHVEKNYDYYVSQDELLYLTLHIKRVIS 289 >UniRef50_A8SDU2 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDU2_9FIRM Length = 275 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 153/278 (55%), Gaps = 6/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I + +NN+ V D + +E +V+G+GIGF E + S I++ + +++ R Sbjct: 1 MRIVRKINNSAAVAQDSRGKELIVIGKGIGFPAVPYELTDMSRIDRTFY----DIDPRYF 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E++S +P E++ I AQ L L ++ ++L DH FA++RF+ + L P+ + Sbjct: 57 EMISTLPQEILLASADITEDAQVVLNTTLNSNLPLTLADHLNFAVERFRSGLNLTIPIAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-AGVTQLM 180 DI+ LYP EF LG +AL I+ + GV LP E IAMHL++A++ + ++ Sbjct: 117 DIRHLYPNEFDLGVKALDILKEYTGVSLPDSEAVSIAMHLINAEIENSEIHSLVKALEIQ 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + +++ + +L ++S SY R H+++L R++ S+ + + +YP+ Sbjct: 177 EGVESIVEREMNLKLDKDSYSYYRFTMHIRYLIQRLMSGTQSETGSGSMVKMLANDYPKT 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + CA++IA F+ Q + E+++L ++I RV +++ Sbjct: 237 YICAKKIAAFLQKQENWCCNDEELLYLMLHINRVCQKN 274 >UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium difficile RepID=Q184X6_CLOD6 Length = 277 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 85/276 (30%), Positives = 156/276 (56%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K+ NNNVV D+ +E ++MG+GIGF K + + IEK++ ++ E L Sbjct: 1 MVIKKVFNNNVVFARDNSGQEVILMGKGIGFNKFTKDLVEIDKIEKKFIFNNEESLSELH 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IPL+ + II + +E L L DSI I+L++H + +KR + ++ +PL W Sbjct: 61 SLLDRIPLKDVELVSEIIQMGREELGDNLNDSILITLSEHISYMLKRMDEGLVFQSPLQW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+++YP E+ ++A+ + K+L +P E+ FI +H +AQ+ +M++ +T+++ Sbjct: 121 EIRQIYPNEYNFSKKAVEYLRKKLDKNIPDSEIAFITIHFANAQLETKDMQETLLLTKII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L +IK+ + + E S Y R ++HL+ R L + + D SL +K Y Sbjct: 181 DNVLDIIKYHYGIEINEYSFDYTRFISHLRCFIKRQLSGEN-TNVDTSLLDIIKMKYKSD 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + CA+++ F+ Y+ KIS E+++L +++ R+ Sbjct: 240 YNCAKKVKNFLEKTYKWKISENELLYLTLHLNRLSN 275 >UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes bacterium D7 RepID=C3RIA8_9MOLU Length = 275 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 172/263 (65%), Gaps = 1/263 (0%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 V +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP++V+ Sbjct: 12 VSSLDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVDVL 71 Query: 74 ATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQ 132 D II A+ L +L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E++ Sbjct: 72 NVTDEIIDFARNGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYK 131 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFS 192 + EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 132 IAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHLK 191 Query: 193 LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 +++ E+SL Y R VTHLKF + R++ D+ L V + YP+A++C + I + Sbjct: 192 ISFDEDSLDYHRFVTHLKFFAKRLMFGEKEAKRDDILFDIVIERYPEAFECVKNIEKHVQ 251 Query: 253 LQYQRKISPAEIMFLAINIERVR 275 Y++ +S AE ++L ++I R++ Sbjct: 252 KIYKKDLSQAEKLYLTLHIARLK 274 >UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED34_9ACTN Length = 302 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 148/282 (52%), Gaps = 9/282 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M K LNNN V+ D Q R+ + MGRG+GF + S IE + +++ + Sbjct: 22 FTMLAIKKLNNNAVLCRDGQGRDVIAMGRGVGFGGDFPRELPLSKIEHTFY----DIDPK 77 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +++ +P +++ +++ + L L + + + DH FA+ R Q+ V + PL Sbjct: 78 GQDVMRDLPSDIVMFAAKVMDIVANELPYDLSTNATLFMADHLSFAVARAQKGVRIAMPL 137 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 ++++ YPKE++ + + ++K LG +LPKDE+ IAM+LV+A++ ++ A T+ Sbjct: 138 AYEVRETYPKEYKAAQFIVMRLEKELGERLPKDEIASIAMNLVNARVVEAVKATAEPTKQ 197 Query: 180 MREM----LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +M +++++ F + +S + R THL++L RI S+N ++ + + ++ Sbjct: 198 FDDMLEDVIEILESDFRIIVDRDSFDFTRFATHLRYLFKRIQAGESLNSANMQMYKNFRE 257 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +PQ +C + I + + +S E ++L I++ R+ + Sbjct: 258 EFPQLAECVKHIGSYCRETWDATLSEEEELYLMIHLNRIISK 299 >UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=3 Tax=Lactobacillus RepID=C2HQQ4_LACAC Length = 291 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 153/276 (55%), Gaps = 2/276 (0%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + + I ++LNNN VV D+ R V +G GI FQ++AG I IEK + + Sbjct: 7 IMIVIKRVLNNNAVVAKDELNRTLVALGSGIAFQQKAGHIIPKDKIEKIFYPKDEDATNS 66 Query: 61 LSELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +SE LS I + + DRIIS A KL D IY+SL DH QFA++R + +L+ N L Sbjct: 67 ISETLSQIDPKYIELSDRIISEAITSSGKKLSDDIYVSLPDHLQFAVERVKNGILIQNKL 126 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 + + YP EFQLG+ L + ++ G+ P DE IAMHL++A+ ++E+ G +L Sbjct: 127 TVETMQTYPDEFQLGKRVLKYLSEKTGLDFPDDEATNIAMHLITAEEGDSLENTEGTIEL 186 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNYP 238 + L++I N S+SY RL+THLKF RI + S +D+ L V +Y Sbjct: 187 INRFLKIISEMLGKNINSNSVSYYRLITHLKFFIQRIKKQQSQKFKADKDLYDMVIHSYH 246 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + + A+RIA + + ++S E+MFL I+I R+ Sbjct: 247 KEYIIAQRIAGIVLHDFNYEVSEDEVMFLTIHIHRI 282 >UniRef50_A8FDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus pumilus SAFR-032 RepID=A8FDU8_BACP2 Length = 280 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 92/279 (32%), Positives = 165/279 (59%), Gaps = 5/279 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + K+LNNN+V+ + + Q E VV G GIGF+K+ G+ ++ S I K + + L Sbjct: 1 MFTVVKVLNNNIVLALTEAQNEVVVFGTGIGFKKKKGDTLDESAISKTFY---SDQTSPL 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ IP +++ ++II + +E L K L S+ SL+DH FAI+R ++ + NP++ Sbjct: 58 ESQLTAIPTDILLLTEKIIRVGEEMLNKKLGSSVLFSLSDHLTFAIQRHEEKIAYENPIV 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W+I LY +E+Q+G++ALTII K +G+ E IA+H V+AQ+ +M D +T L Sbjct: 118 WEIPHLYFQEYQIGKKALTIIQKMMGISFEDTEASLIALHFVNAQIDGQSMGDTIKMTHL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +E++++I+ F + + S++Y R +THL++ R + D+SL++ ++ Y + Sbjct: 178 TKEIVKIIQNIFEMILDKSSINYSRFITHLRYFIVRQETNQPPQQMDDSLKELIQDRYMK 237 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 ++ C I + ++ ++ E++FL I+IER+ KEH Sbjct: 238 SYACGLIIKEMLKREFNWNVTEDELVFLVIHIERITKEH 276 >UniRef50_D2NVK8 Transcription antiterminator n=11 Tax=Listeria monocytogenes RepID=D2NVK8_LISMO Length = 276 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 155/276 (56%), Gaps = 1/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNN ++V D EK+V+G+GI F KR G I+ +EK + + S E+ R Sbjct: 1 MLRVKRVFNNNTILVHDSNGLEKIVIGKGISFNKRVGNIISEEAVEKTFIVDSPEITERF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGKLQDSI-YISLTDHCQFAIKRFQQNVLLPNPLL 120 +L+ +P+ + ++II A+ L D + Y+ L DH +AI R++ + N LL Sbjct: 61 VQLIKEVPINHLDLTNKIIKDAESELNVTFDELTYLGLADHINYAISRYKSGHQIKNALL 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I++ YPKEF + ++ I V+L +DE GFIA+H V+ Q G + + T+++ Sbjct: 121 LEIKKFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALHFVNGQQEGIINNTLITTEVL 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L +++ S+ EESL+Y R +THL+F RI + + + + V + YP+A Sbjct: 181 KKVLLILEDTLSIKLDEESLNYLRFITHLRFFIERINSEGAREKEEPDMIEQVFKLYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + I+ +I + E+M+L ++++R+ K Sbjct: 241 YASVQIISDYIQETLNCTVYAEELMYLTLHVQRLIK 276 Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 L ++++ + + ++ + + L+Y L H+ + R I ++ L +K Sbjct: 70 NHLDLTNKIIKDAESELNVTF--DELTYLGLADHINYAISRYKSGHQIKNA---LLLEIK 124 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + YP+ + A+ I K+ E F+A++ ++E Sbjct: 125 KFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALHFVNGQQE 167 >UniRef50_D2NQD9 Transcriptional antiterminator n=2 Tax=Rothia mucilaginosa RepID=D2NQD9_9MICC Length = 289 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 160/283 (56%), Gaps = 8/283 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++I NNNVV+ +D +E V++GRGI F KR G+ I+ S +E+ + RLS Sbjct: 1 MRISRIYNNNVVLTVDHYGKESVMIGRGIAFGKRKGQLIDPSAVEQTFVPEQGMSGERLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LS IP E+++ + S + E +L +S + L DH +A+ R + V + PL Sbjct: 61 MTLSEIPAEILSIATLLESKVRAEGALELSNSFILPLADHLHYAVVRARDGVRVQYPLAP 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 ++ LYP+E + G L ++ +RL V+L +E +A+HLV+AQ + +M +T++ Sbjct: 121 EVTVLYPREVEYGRTVLEMVRERLQVELDPNEAIPLALHLVNAQFATADMSQAFRMTEVF 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD------ESLQQAVK 234 ++ ++I+ + +S+S R VTHL++L R ++ D SL A++ Sbjct: 181 AQVFEIIEASYERKIDPDSMSAARFVTHLRYLFVRASRASANRTEDADEVSQPSLLAALR 240 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + P+A+ CA+++ + + +Q ++ ++ E+ +L I+I R+ ++ Sbjct: 241 ADVPRAYACAQKVLLVLQMQLKQSLTRDELTYLTIHIARLARD 283 >UniRef50_P15401 Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Bacillus subtilis group RepID=SACY_BACSU Length = 280 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 171/276 (61%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I +ILN+N +VV D Q EK+++G GI F K+ + ++ S IEK + + Sbjct: 1 MKIKRILNHNAIVVKD-QNEEKILLGAGIAFNKKKNDIVDPSKIEKTFIRKDTPDYKQFE 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+L +P + + ++IIS A++ L K+ + I+++ +DH FAI+R +++ NPLL Sbjct: 60 EILETLPEDHIQISEQIISHAEKELNIKINERIHVAFSDHLSFAIERLSNGMVIKNPLLN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 +I+ LYPKEFQ+G A +I +LG+ +P DE+G IAMH+ +A+ + G+M +T ++ Sbjct: 120 EIKVLYPKEFQIGLWARALIKDKLGIHIPDDEIGNIAMHIHTARNNAGDMTQTLDITTMI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R+++++I+ Q S+N E+++SY+RLVTHL+F I SI + D + +K+ + A Sbjct: 180 RDIIEIIEIQLSINIVEDTISYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + CA I F+ +Y + E+ ++A++I+R + Sbjct: 240 FLCALSIGTFVKKEYGFEFPEKELCYIAMHIQRFYQ 275 Score = 40.7 bits (94), Expect = 0.050, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 94 IYISLTDHCQFAIKRFQQNVLLPN---PLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 Y L H +FAI+ + + ++ I+ + F T + K G + P Sbjct: 200 SYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDAFLCALSIGTFVKKEYGFEFP 259 Query: 151 KDEVGFIAMHLVSAQMSG 168 + E+ +IAMH+ Sbjct: 260 EKELCYIAMHIQRFYQRS 277 >UniRef50_A4QHA6 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4QHA6_CORGB Length = 293 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 148/284 (52%), Gaps = 12/284 (4%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 +I ++ NNNVV+ + R V++GRG+GF + G + + +++ + S+ + +L+ Sbjct: 8 KIIQVFNNNVVLAENGSDR-AVLLGRGLGFGRAPGAAVQADAVQEYFHPSAIQPPEQLAR 66 Query: 64 LLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L++ + E+++ + A+ + DS +++ DH +FAI R Q + LPNPL W+ Sbjct: 67 LIAELNPEIISLARELAETAEFMCDVTILDSTVVAMADHIRFAIDRAAQGISLPNPLRWE 126 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED-----VAGVT 177 + + YP+EF G +AL I V LP++E +A+H+V+AQ + N A +T Sbjct: 127 VSQFYPREFAFGRKALAHIKSTTRVSLPEEEAVSLALHVVNAQFAQNTRQDSMARTAQLT 186 Query: 178 QLMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHA----SINDSDESLQQA 232 L+ ++ +++ +S++ R +THL+FL R++ SL Sbjct: 187 TLLTKVFDVVEAALPDQQIDRDSMTAARFITHLRFLLQRLIGREGKAHEAEKGLISLSSK 246 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 V YP ++ A ++ + + L+ S E ++LA++I R+ K Sbjct: 247 VADEYPVSFSIAGKVIMMLQLELDTTCSEDEAVYLALHIARLMK 290 >UniRef50_Q02YC0 Beta-glucoside operon antiterminator n=4 Tax=Lactococcus lactis RepID=Q02YC0_LACLS Length = 284 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 163/278 (58%), Gaps = 2/278 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N++ K+LNNNVV+ + E ++MG G+G+ K+AGE + IEK +AL Sbjct: 4 NVKSKKVLNNNVVIAQNTNDEETILMGLGLGYGKKAGEVVEDKKIEKIFALKVTSEQQNF 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 SELLS IP ++ + A+ + K + D++ ++ DH AI R + N+ + N LL Sbjct: 64 SELLSEIPSGIVELSILTLEKAKTKFDKTISDTVLVAFADHLNAAIIREKDNIAIKNFLL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R +P+EF L E L + ++L + LP+DE GF+AMH+V+ + E +T+LM Sbjct: 124 WDIKRFFPEEFALCLETLQKVKEKLNISLPEDEAGFLAMHIVNGTLGSGHEYATELTKLM 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYPQ 239 E+L +K+ +N+ E+ + +QR +THLKF + RIL + ++S DE L + YP+ Sbjct: 184 EEILTTLKYTLQVNFNEQDIYFQRFITHLKFFTERILSNTKSDESTDEDLFLLITGKYPR 243 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A+ ++++ F+ ++S E +++ +++ R+ ++ Sbjct: 244 AYIGTKKVSEFLKQTRSYEVSQNEQIYMTVHLARILEK 281 >UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria RepID=B4F212_PROMH Length = 284 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 96/279 (34%), Positives = 170/279 (60%), Gaps = 3/279 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KILNN+VV+ +D+ ++E +VMG+GI + K+ G+ I S I K++ LS R+ Sbjct: 1 MKIKKILNNSVVISLDEAEKEIIVMGKGIAYAKKVGDEITSEQITKKFILSPKNCPQRVL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS+I L+ + D II A+E++ QDSIYI+L DH Q +I+R+++ + N +LW Sbjct: 61 DLLSNITLDYVEIADNIIQYAKEKMTLDTQDSIYIALIDHIQASIERYKEGTFIRNKILW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ Y +EF +G L +I+ R + +P+DE GFIA+H+ S + + N++ VT ++ Sbjct: 121 EIKNFYSEEFDIGLYGLKLINDRFNISMPEDEAGFIALHIASIRTNDNIQQTYKVTHFIQ 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNYPQ 239 + ++K+ ++ Y SL+Y+R VTHL++ S R+ + + L +K Y Q Sbjct: 181 SITNIVKYYLNIEYDIGSLNYRRFVTHLRYFSIRLFSQPENDHEPLENELLDIIKDKYHQ 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C +I+ FI +Y + EI++L I+I ++ +++ Sbjct: 241 PYMCCLKISKFIKDKYNCTLDDNEILYLIIHIAKIAEDN 279 >UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTN7_PAESJ Length = 286 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 150/276 (54%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQ-REKVVMGRGIGFQKRAGERINSSG--IEKEYALSSHELNG 59 ++I +I+ NNV++ ++ + RE V+ G+GIGF + + I++ IEK Y L + Sbjct: 7 LRIDRIVGNNVILTMEPKSSREYVLFGKGIGFSCKGQKFIDAEDPRIEKRYRLDDRDKAL 66 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 LL + EV+ ++II +ERL + +Y +L H QF + R + + + NP Sbjct: 67 HYHSLLEELDPEVVQISEQIIDEIRERLGTPVDPKVYFALPSHIQFVVYRLRNGMEIVNP 126 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L++ + YP+EF++ +A +I ++ + +P+DEVGF+ H+ SA S + +T+ Sbjct: 127 FLYETKMCYPQEFKIAAKAAKMISEKFDITIPEDEVGFLTYHVYSAAGSVTAGQMVQLTE 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 LM E+++ I+ ++S Y RL+ HL+++ RIL++ + +K P Sbjct: 187 LMNEIVERIEGWREAPLSKKSSDYARLIMHLRYMMERILQNKETEN---PFSAEIKDKIP 243 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Q AE IA IG + K+S EI +LA+++ R+ Sbjct: 244 TEHQKAELIAQMIGERLNVKVSSDEIGYLAMHLYRL 279 >UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B732 Length = 280 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 150/274 (54%), Gaps = 6/274 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ LNNN VV D+ +E +++G+GIGF+++AG+ I + G + Sbjct: 11 YEVIGTLNNNGVVAKDELNKEVILLGKGIGFKRKAGDVIENPGKNIKCYSLEKNTGKN-- 68 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +L + + + II A++ G + I + L DH F+I R + ++++ NPL D Sbjct: 69 -VLQGVDPIFLEIANEIIRYAEKEFGDIDTKILLPLADHIAFSIDRIKNDMVISNPLTSD 127 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ L+ E+++ +A II +RLG ++ DE+G+I++H+ +A S V ++ + Sbjct: 128 IRLLFADEYEVATKARKIIKRRLGYEITDDEIGYISLHIHAALSSQPPARSLQVASIIHQ 187 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 + ++ F++ E+S++Y RLV H+KFL RI + S+ K+ +P+++ Sbjct: 188 TVTYVEETFNIVIDEDSIAYIRLVNHIKFLMVRIDRKEDVQ---VSMTDYTKEKFPESYA 244 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A R+A +I KIS EI +LAI+IER+R+ Sbjct: 245 VACRVADYIEKLILEKISDEEIGYLAIHIERIRQ 278 >UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB Length = 282 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 181/277 (65%), Gaps = 3/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M I KILNN+ V IDD R EKV+MG+GI FQK+ G+ +N IEK +++ + N + Sbjct: 1 MVIKKILNNSAVTTIDDATRIEKVIMGKGIAFQKKPGDILNEEKIEKIFSIENQNENLKF 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+S IP+E + + IIS A+ +L K + IYISLTDH FA +R+ + + + N +L Sbjct: 61 QSLISEIPIEHIKVSENIISYAKRKLDVKFDEHIYISLTDHLSFAFRRYSKGIKIKNNML 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 WDI+R+Y KE+ +G A+ I LG+++ +DE GFIA+H++ A ++ +M++ +T+++ Sbjct: 121 WDIKRIYKKEYNIGMWAVEYIKGELGIKMDEDEAGFIALHIIDASLNESMDNTINITEII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS-INDSDESLQQAVKQNYPQ 239 +L +IK+ FS+ + E+ +SY RL+THLK+ + R++ + I++ ++S + VK NY + Sbjct: 181 DGILNIIKYFFSIEFNEDDMSYDRLLTHLKYFAQRVVSRKNAIDEEEKSFLEIVKTNYKE 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++C +I FI Y ++ EI++L ++++RV Sbjct: 241 AYRCVGKIKSFIEKNYDYEVKGGEIVYLTLHVQRVIS 277 >UniRef50_A6BJ08 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A6BJ08_9FIRM Length = 281 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 147/278 (52%), Gaps = 4/278 (1%) Query: 1 MNMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 M +I K+LN+N V+ I D +E ++MG+G+GF ++ ERI ++ Y+L ++ G Sbjct: 1 MMYRIEKVLNHNTVMAIHQDDHKEVLIMGKGVGFGRKVAERIEVRPEDRLYSLQKYKERG 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 E++ I E + + ++ A++ GK+ + L DH FA+KR Q + + NPL Sbjct: 61 GAKEIVKSIAPEFLEVTNAVLDEAEKIFGKIDRMVLFPLADHIAFAVKRIQNHEQISNPL 120 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 DI+ L+ EF+ E ++ K+ G+ + DEVG++A+H+ SA + + + Sbjct: 121 TEDIRVLFHMEFKAAESIRPLLQKQFGIDIEDDEVGYVALHIHSAIEDEKVSQAMQMARS 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +RE + +++ SLSY RL+ H++++ R L + + + ++ +P+ Sbjct: 181 VRECISMVEEAIGKPIDIASLSYNRLMNHIRYMVARALSGEKLKVN---MNDYMEVKFPK 237 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ A+ + +G K+ E +LA++IERV + Sbjct: 238 SFGMAQAVCDQVGESLGVKLEEVETGYLAMHIERVAND 275 >UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178876C Length = 295 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 145/276 (52%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQR-EKVVMGRGIGFQKRAGERI--NSSGIEKEYALSSHELNG 59 + +++ NNVV+V ++ E V++G+GIGF + G I + IEK + L E Sbjct: 7 FTVVRVIGNNVVMVTGGKKESEYVILGKGIGFGAKIGGTIASDDKRIEKLFRLEDREQWS 66 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 + LL +VM D+I++L + L D +Y++L H QF I R ++ + + NP Sbjct: 67 QAHHLLEEFDPQVMEITDQILNLIGQEFPGTLNDKVYLALPSHIQFTIYRIRKGMDIINP 126 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L + + +PKE+ + +A +I K +++P+DE+GF+ H+ SA + + + Sbjct: 127 FLEETRISFPKEYDIAAKAAELIGKTFDIEVPEDEIGFLTYHVYSAVSHVPVGHLVKASN 186 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ +++ I+ + + + S+ Y RL+ HL+F RIL D + ++ + Sbjct: 187 VVGSLVKYIEEERQVAFDRGSMDYVRLLMHLRFSVDRILNQEI--HVDNPFAEQIRSKFT 244 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 Q + A R++ + + +K+ AE+ FLA+++ R+ Sbjct: 245 QEYGLATRLSGMMEKELGKKVPEAEVCFLAMHLYRL 280 >UniRef50_B1QS11 Transcription antiterminator LicT n=2 Tax=Clostridium butyricum RepID=B1QS11_CLOBU Length = 281 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 96/277 (34%), Positives = 156/277 (56%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNNVV+ +D+ E VVMGRG+ F + G+ I I+K + + + Sbjct: 1 MIIKQILNNNVVISENDKNEEIVVMGRGLAFGAKKGQVILEDRIQKVFTDEKNCDFSHFT 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LLS I L + +I+ + L KL +SIYI+LTDH ++R N + N +LW Sbjct: 61 KLLSEIDLVNFEFIENLINYVKSTLGKKLNNSIYITLTDHINTLLERAATNAYVKNTMLW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R+Y EF++ + + I++RLG +E I MH+V+A++ NM+ +T+ M Sbjct: 121 DIKRIYRDEFKIARDVVCRINERLGSNFDDNEAASITMHIVNAELETNMKTAVDITKTMT 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE-SLQQAVKQNYPQA 240 ++L ++K+ F + Y EE LSY R VTHL F + R+ + D E L VK+ Y + Sbjct: 181 DILNIVKYHFKIIYDEECLSYYRFVTHLLFFTQRVFNSKTYTDDKETDLFDMVKEKYSEM 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +I F+ +Y + E ++L I+I +V +E Sbjct: 241 YKCTLKIKEFLYDEYNYDLEDEECLYLTIHIAKVVRE 277 >UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Bacillales RepID=C4L0D3_EXISA Length = 282 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 95/279 (34%), Positives = 166/279 (59%), Gaps = 7/279 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++I KILNNN V+V D+ EK+ +G G+ F+K + +N IEK + + N + Sbjct: 1 MIKIKKILNNNAVIVSDE-GEEKIAIGPGVAFKKAKNDIVNPHKIEKLFIM---PENDKF 56 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +LLS IP+E + IIS A++RL + I+I LTDH FAI+R + L N LL Sbjct: 57 QQLLSRIPVEHFTVSEDIISYAEKRLETSFNEHIHIVLTDHISFAIEREMDGISLRNKLL 116 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 +I+ LY E+++G A+ I ++L VQ+PKDE FIA+H+ + ++ G++ T + Sbjct: 117 NEIKILYRNEYEIGLWAIEHIAEKLNVQMPKDEAAFIALHIHTMKVKGGDLRKTVKQTTI 176 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +R+M+Q I + ++ +E+ LSYQRL+THL+F+ R+ H + DE + + ++ + Sbjct: 177 VRDMIQSISRRLDVSIEEDDLSYQRLLTHLRFVMDRV-NHYDHHTIDEDMLRMIQTKFTS 235 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 A+ CA +A + Y + +E+ ++ ++I+R++ +H Sbjct: 236 AYACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQH 274 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 72 VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQ--QNVLLPNPLLWDIQRLYPK 129 ++ + IS + + D Y L H +F + R + + +L IQ + Sbjct: 176 IVRDMIQSISRRLDVSIEEDDLSYQRLLTHLRFVMDRVNHYDHHTIDEDMLRMIQTKFTS 235 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 + + +++ G+ LP+ E+G+I +H+ Q + + Sbjct: 236 AYACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQHHQK 277 >UniRef50_C7VAG3 Predicted protein n=2 Tax=Enterococcus RepID=C7VAG3_ENTFA Length = 281 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 89/277 (32%), Positives = 166/277 (59%), Gaps = 5/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSS--HELNGR 60 M++ K LNN++++ +D Q +E ++MG+GIGFQ + G+ + + I+K + L S L Sbjct: 4 MRVIKTLNNSLILCLDKQGKEVILMGKGIGFQLKKGDLVPADKIQKVFKLDSLSDALKKD 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L P +++ RII A + L S++ +L DH + AI+R Q+ ++ N L Sbjct: 64 YIKLFEAAPDDLIICVKRIIDYANAKFDFKLNKSLFFTLVDHLKHAIERSQKGIVFQNRL 123 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQ 178 L +IQ+ YPKEF++G A+ +I+K++ VQLP++E G IA H+V+AQ NME+ + Sbjct: 124 LIEIQKYYPKEFEIGCYAIQLINKKMNVQLPEEEAGNIAFHIVNAQSEQANMEETMLSVR 183 Query: 179 LMREMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++++L ++ + F ++S+ Y R VTHL+F R+++ + + D+ L +VKQ + Sbjct: 184 ALKDILAMLGYLFPEKKVDKDSMLYLRFVTHLQFFIARMIKKEELPEKDDFLLASVKQRF 243 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ ++ A +I ++ + + E+++L ++I RV Sbjct: 244 PKEYRAALKIKEYVQEEMGASANQDELLYLTLHISRV 280 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 + ++ ++ +F + + LV HLK R + + L ++ Sbjct: 74 DLIICVKRIIDYANAKFDFKLNK--SLFFTLVDHLKHAIERSQKGIVFQNR---LLIEIQ 128 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + YP+ ++ I + ++ E +A +I + E Sbjct: 129 KYYPKEFEIGCYAIQLINKKMNVQLPEEEAGNIAFHIVNAQSE 171 >UniRef50_Q5WCP1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCP1_BACSK Length = 277 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 156/277 (56%), Gaps = 5/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K NNN+ +V D E VV+G G+GF ++ G+ I+ + + K+Y+ S + S Sbjct: 1 MNLIKSFNNNIALVEDAAGLEWVVIGTGVGFNRKKGDAIDETLVTKKYSAESSSTHP-FS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+ +IP+ V +I A+ + +L D ++++L DH +AI+R + P+ W Sbjct: 60 ELIDNIPVAVFEVAAMMIRKAETIIGVQLSDHLFLALADHLNYAIQRTLDGIDYPHSHPW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++ RLYPKE + +EA+ I+ L V LPK E F+ H V+AQ +M++ +T+++ Sbjct: 120 ELDRLYPKEHKAAKEAVRIVFDELDVLLPKSEESFLTYHFVNAQGQQRHMKETVKMTEVI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNYP 238 ++++I+F + L EES Y RL+THL++ R L + + L + ++ Y Sbjct: 180 NRIIKIIEFDYELQLNEESFDYLRLLTHLRYFVLRQLHQEKVEYKQFNPELIELIQGTYK 239 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +A+QCA +I + QY ++S E ++L ++I R+ Sbjct: 240 KAYQCATKIGRILHKQYGWELSSNEELYLTLHIWRLL 276 >UniRef50_C2FLI7 Transcription antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI7_LACPL Length = 277 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 156/276 (56%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++I K+LN++VV+V D+ +E +++G+GIG+ K+ G I + + S +L Sbjct: 1 MLRIKKVLNSSVVLVTDEHDQEFILLGKGIGYGKKPGAVIMDGDFNQVFVASPDPNVEQL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ +++ I+S A E+L KL D++Y++L DH +F ++R + +++ N + Sbjct: 61 LATIASSSPQLIEITQTIVSEATEQLQSKLSDTLYVALLDHLKFTLERAAKGIVITNRVY 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQL 179 W+I+ Y EF++G+ A+ ++++ + E IA H+++A+ + +D QL Sbjct: 121 WEIKTYYSHEFEIGQLAVRLVNRAFKTDFSEQEAANIAAHIINAENGTDERKDALKAGQL 180 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ ++K+Q E L+YQR V H+KFL R + ++D+D ++ VK + Sbjct: 181 IGRIINIVKYQTGGIVNEHDLNYQRCVVHVKFLVERAIAGELLDDADPAMVAIVKSQNSR 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A+ A ++A ++ ++++ + E+M +A+ I+R+ Sbjct: 241 AFAIAGKVAAYMSMKFKMPLPDEEVMLMAMQIQRLL 276 >UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBZ8_9FIRM Length = 341 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 88/274 (32%), Positives = 154/274 (56%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ K+ NNN V V+ RE +++G G+GF +R G+ I+ S + K Y + + + Sbjct: 70 MQAVKVFNNNAVSVVMPDGREAILVGNGLGFGRRPGDVIDKSRVSKVYYVQNELQT-KFL 128 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++L ++ +VM +RI A+E+ L ISL DH FA++R ++ LPN +L + Sbjct: 129 KMLDNVTPQVMQAAERISLAAEEQGILLSSKSTISLVDHISFALERVEKGTFLPNLMLSE 188 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 + LYPKE+ +G+ AL ++ + GVQLP+DE G+IA+HLV+ G + + ++ Sbjct: 189 TRMLYPKEYAVGQRALELVRQFCGVQLPEDEAGYIALHLVAGAADGAL--AYDTVKFVKA 246 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQAW 241 + ++I + ++EESL RL HLKFL+ RIL H D+ ES+ + Q + Sbjct: 247 VKEIICDTYHCTFEEESLETTRLTVHLKFLAARILRHTPWQDAGLESMYTVLLQRDSRNE 306 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 C +RI ++ ++ ++ E ++L I++ ++ Sbjct: 307 VCLQRINAYLRQEFDYELDHQEQVYLLIHLTKIV 340 >UniRef50_B5CMP9 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMP9_9FIRM Length = 285 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 150/277 (54%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 +I+K+LN+N V+ I D +E +VMG+GIGF K+ ERI + Y+L + G Sbjct: 1 MYRISKVLNHNTVIGIHADDNQEYLVMGKGIGFGKKVSERIEVRDGDTVYSLQATSNRGN 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 EL + I + + I+ A++ + ++ + DH ++A+KR Q + + NPL Sbjct: 61 AKELATSIQPIYLEIANEILDEAEKVFQNIDRAVLFPMADHLEYAVKRIQNHEQISNPLT 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ E++ E I+ +RLG+ + +EVG+I++H+ SA N+ + + + Sbjct: 121 DDIRVLFHLEYKTAECVRPILKERLGITIDDNEVGYISLHIHSAIKDENVSLAMQIARAV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 RE + ++ + SLSY RL+ H++ + R L+H + +L ++ +PQA Sbjct: 181 RECISHVEQAVNRPIDVMSLSYNRLMNHIRNMVARALQHEELK---LNLNDYMEVKFPQA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +Q A+ I +G +S AE+ +LA++IERV E Sbjct: 238 FQMAQTICDQVGKNLCCTLSDAEVGYLAMHIERVVHE 274 >UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-binding protein n=4 Tax=Enterococcus RepID=C9A770_ENTCA Length = 282 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 157/277 (56%), Gaps = 3/277 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + I K+LN++VV+V D + +E + +G+GIG+ K+ G+ I + I++ + + +G+ Sbjct: 1 MIYIKKVLNSSVVLV-DKEGQEMIALGKGIGYGKKVGDSIADTQIDQVFLPIDEKKSGQF 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++L+ IPL I+ LAQ+ L L +IY++L+DH FA++R Q+ + + N L Sbjct: 60 ADLVDEIPLYYFEMTKEIVQLAQKMLPYPLNSTIYLTLSDHLHFAVERQQKGLSVTNRLY 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA-GVTQL 179 W+I+ Y EF+ E+AL ++ ++ ++LP++E IA HL++AQ + +L Sbjct: 120 WEIKNYYTDEFRAAEQALRLLKEKYQIELPEEEASNIAFHLINAQSNTEENQDGLKKAKL 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ ++++ + S+ Y R +TH++F R + + DE L + + YP Sbjct: 180 IGLIVNMVRYSIQQDVNTNSIHYNRFITHVRFFVDRFFLDGLLQEEDEGLYRQMWALYPN 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A + A ++ +I +YQ KI EI++L ++I R+ Sbjct: 240 AMEIATKVKAYIDKEYQTKIPVNEIVYLGVHINRLMN 276 >UniRef50_C6JD93 Transcription antiterminator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD93_9FIRM Length = 283 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 167/278 (60%), Gaps = 3/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILNNN+++ D Q E +V G GI FQK+ G+++ S IEK + + +++ + Sbjct: 1 MVIHKILNNNLILSRDGQGHEVIVKGCGIAFQKKKGQQVEESRIEKIFTAENAQISKEIQ 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ IP + + + ++ +E+ KL DSIY SL+DH AI R + + L N LL Sbjct: 61 GYLTAIPEKYLDFVEAFVNDVKEKEGMKLNDSIYFSLSDHIMGAISRLENGIRLQNMLLL 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI++LY KE+++G E L +++ V L DE GF A+H V+A+ G D ++ ++ Sbjct: 121 DIKQLYHKEYEIGLELLKKVNEMFEVDLSADEAGFFALHFVNAE-DGGKTDSYQISIIVH 179 Query: 182 EMLQLIKFQF-SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++L +++ + ++ +QE +L YQR +THLK+ + R L D ++ L + +K+ Y +A Sbjct: 180 QILDIVEKYYDNMEFQENNLYYQRFLTHLKYFAQRFLHKELHYDENQELFKIIKEQYREA 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + C + I + + +Y+ ++ E+++L I+I+++ ++H Sbjct: 240 YGCVKMIYLMMEEEYKYAMTEDEMLYLTIHIQKITEDH 277 >UniRef50_C5RMW0 Transcriptional antiterminator, BglG n=2 Tax=Clostridia RepID=C5RMW0_CLOCL Length = 304 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 103/280 (36%), Positives = 169/280 (60%), Gaps = 8/280 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + M I KI NNN ++ D E VVMG GI F+K AGE+++ + IEK + L ++ + + Sbjct: 25 IEMIIKKIFNNNAILAKDSDNHEFVVMGCGIAFKKSAGEKVDKALIEKTFILKQNDASEK 84 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 LL +P E ++ C II A+ L KL D IY++LTDH AIK + + + NPL Sbjct: 85 FKLLLEDVPSEYVSLCYDIIQYAKNMLSTKLNDYIYVTLTDHIYNAIKLYDEGLKNLNPL 144 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS---GNMEDVAGV 176 +W+I++ Y KEFQ+G +AL I++ LG +LP+DE G I +HL++AQ++ MEDVA Sbjct: 145 IWEIKKFYAKEFQVGLKALEFIEEELGKKLPEDEAGNITLHLINAQLNSSYNKMEDVAEY 204 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T+ ++++L ++ + + + E S+SY+R VTHL+F R+ + I D+ L + +K Sbjct: 205 TKKIQDVLSIVTYTYGITLDESSISYERFVTHLRFFFQRLNKKELIESDDDFLLKKIKAK 264 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Y +A+ C +I +++ E ++L I+I+RV + Sbjct: 265 YKKAYDCMLKI----EKYLDIELTDEEKLYLTIHIQRVTQ 300 >UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B6FR13_9CLOT Length = 293 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 150/277 (54%), Gaps = 4/277 (1%) Query: 1 MNMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 + +++K+LNNN V+ I+ ++ E V++G+GIGF K+ ER + Y+L G Sbjct: 16 IMYRVSKVLNNNGVIAINMEENIEYVLLGKGIGFGKKISERFEAPDGCARYSLREDTERG 75 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 EL I E + + I+ A+E+ G++ I L DH FA++R + + NPL Sbjct: 76 SAKELAKSIAPEYLEIANAILVEAEEKFGRIDRRILFPLADHISFAVERIRHGEQISNPL 135 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 DI+ L+ E+Q+ + I+ +RL V++ E+G++A+H+ SA N+ + + Sbjct: 136 TEDIRALFGSEYQVASKLKEILKERLSVEIDSHEIGYVALHIHSAIEDENVSMAMQMARA 195 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 +RE +++++ + SLSY RL+ H+K++ R ++ SI L ++QN+P+ Sbjct: 196 VRECVKILEQETGKQIDVRSLSYNRLMNHVKYMIIRAIKKESIK---LDLNDYMQQNHPE 252 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++ + I + ++ E+ +LA++IERV Sbjct: 253 AFRLGRLVCQDIEKECAIRLEKMEVGYLAMHIERVYS 289 Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 ++ +L + +F + L H+ F RI I++ L Sbjct: 82 KSIAPEYLEIANAILVEAEEKFGRI---DRRILFPLADHISFAVERIRHGEQISN---PL 135 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + ++ + +Q A ++ + + +I EI ++A++I ++ Sbjct: 136 TEDIRALFGSEYQVASKLKEILKERLSVEIDSHEIGYVALHIHSAIED 183 >UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leuconostoc RepID=Q03XR5_LEUMM Length = 286 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 164/283 (57%), Gaps = 11/283 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + +I NNNV++ + ++E V++GRG+GF+++ G ++SS IEK Y + Sbjct: 1 MLVKRIFNNNVLLAEN-SEQELVIVGRGVGFKQKIGNTVDSSKIEKTYYPQDENWTRMFN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E+ I + + IIS A++ LG D + I L DH QFA++R Q+N+ + N LLW Sbjct: 60 EMADTISSDYVEIASHIISTAEKSLGLSFDGYLLIGLADHIQFAVERLQKNLPIKNELLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED-VAGVTQLM 180 + + YP E+++G A+ I++++GVQLP+DEVGFIA+ V + N + +TQL+ Sbjct: 120 ETKHFYPDEYRIGALAVAFINEQMGVQLPEDEVGFIALKFVEKRAGPNFNEKATNMTQLI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--------LQQA 232 L LI+ + +L+YQRL+ HL+F R+L+ + + + S L ++ Sbjct: 180 ESALTLIRHDLLPDIDSSNLNYQRLIVHLRFFVDRLLDESHVQKGENSFDNVMSQHLSES 239 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +++ Y ++QCA+R+ + Q ++K E ++L ++++R+ Sbjct: 240 LQERYTSSYQCAQRVINYFEKQTKQKTGVNEQVYLTMHLQRIV 282 >UniRef50_C7TG18 Transcription antiterminator lacT n=2 Tax=Lactobacillus rhamnosus RepID=C7TG18_LACRL Length = 288 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 143/280 (51%), Gaps = 5/280 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ ++ NNN V+V +E ++ G+GIGF KR G+ ++ + L+ ++ Sbjct: 1 MLKVKQVYNNNAVLVDVGNGKEAILQGKGIGFSKRKGDDVDPKASSEILYLNDTQVKNHF 60 Query: 62 SELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL +P++++ +I +A ++ + + IY++LTDH KR +P Sbjct: 61 TSLLKDVPIDIVVATFGVIGMAKKKYHYPVLNYIYVTLTDHVFQMYKRLTAGKYQASP-A 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQL 179 DI+ YP +Q+ +A ++ LGVQ P+ E+ IA+H ++A+ + G ++ +T Sbjct: 120 PDIRDRYPLPYQIAADARRQLNHDLGVQFPEAEIKNIALHFINAKGVDGELDPTVTLTAR 179 Query: 180 MREMLQLIKFQFSLNYQ-EESLSYQRLVTHLKFLSWRILEHASIN-DSDESLQQAVKQNY 237 + ++ + ++ LN + RL+ HL++L R+ + D + Q ++ Y Sbjct: 180 VNAIVTQVFAKYGLNRNFANQNYFDRLMIHLQYLVERLNTNEQDEADLGPEIGQDFRRLY 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 P+++ A I + Q K++ E ++ I+I+R+ +E Sbjct: 240 PKSFTIATEICTELEKALQIKLNENEHVYFIIHIQRLIQE 279 >UniRef50_B9Y734 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y734_9FIRM Length = 303 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 1/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + ITK++NNNVV D RE +V G+ +GF K+ GE I++S I K + S + L Sbjct: 14 HYVITKLINNNVVFSTDAGGREIIVFGKAVGFGKKRGEGIDNSKIIKVFEPSDTKEKNFL 73 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+ I + +II+L + RL K+ + ISL+DH A++ Q+ +P +L Sbjct: 74 MNLVEDIDPVYIDITTKIIALFESRLHCKVNVMMNISLSDHIHNAVRNKQEGFQVPLDIL 133 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +++ +YP+EF + +E L +I+K L +DE G+I +H ++AQ D Sbjct: 134 EEVKTMYPREFLIAKEGLDLIEKETRTTLSEDEAGYIVLHYINAQGQHFRSDAKIRLLFQ 193 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++Q I+ + + S+ Y R +THL FL+ R+ + + S +L + Q YP+ Sbjct: 194 EHVIQKIEQVYDVKLDHLSVYYSRFLTHLSFLAARLHDGQLLEASQSTLYPLLVQKYPRL 253 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E IA I ++ + E +LA++I + K Sbjct: 254 EACTEMIAEIILNEFHMPVGEEEKGYLALHIHNLLK 289 Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/116 (11%), Positives = 38/116 (32%), Gaps = 5/116 (4%) Query: 163 SAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI 222 + M+ + + +++ L + + + L H+ Sbjct: 71 NFLMNLVEDIDPVYIDITTKIIALFESRLHCKV--NVMMNISLSDHIHNAV---RNKQEG 125 Query: 223 NDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + + VK YP+ + A+ I + + +S E ++ ++ + +H Sbjct: 126 FQVPLDILEEVKTMYPREFLIAKEGLDLIEKETRTTLSEDEAGYIVLHYINAQGQH 181 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 3/157 (1%) Query: 22 REKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIIS 81 RE ++ G+ ++ S L G+ + I L + I Sbjct: 142 REFLIAKEGLDLIEKETRTTLSEDEAGYIVLHYINAQGQHFRSDAKIRLLFQEHVIQKIE 201 Query: 82 LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP---NPLLWDIQRLYPKEFQLGEEAL 138 + Y H F R LL + L + + YP+ E Sbjct: 202 QVYDVKLDHLSVYYSRFLTHLSFLAARLHDGQLLEASQSTLYPLLVQKYPRLEACTEMIA 261 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 II + + ++E G++A+H+ + + ME+ Sbjct: 262 EIILNEFHMPVGEEEKGYLALHIHNLLKNLKMEESTD 298 >UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKZ6_PEDAC Length = 284 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 161/277 (58%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KILNNNV ++ E + GI F+K+ G++I I K Y L S + LS Sbjct: 1 MKVKKILNNNVAIISKGTH-ESIAYSPGIAFKKKIGQQIEEKEISKLYVLDSKDRLEHLS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+H +++ ++I+ + L K+ D +Y++L DH FA+KR Q+ + +PL+W Sbjct: 60 FLLTHSDKKIITLVNKIVDYGENYLKVKVTDYLYLALLDHISFALKRGQKGQFIASPLVW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++++ YP+ +++G +A+ +++ V P+DE I++H ++ Q N+E ++ Sbjct: 120 EVKKFYPQYYEIGIKAINWLNQTYEVNFPEDEAIPISLHFINVQDEQINVEQKVKDITVL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQ 239 R++L +IK+ F++N+ E S++Y RLVTHL++ R+ H +D L + ++ YP+ Sbjct: 180 RDLLNIIKYHFNINFDETSINYMRLVTHLQYFIDRLNCHELSTKTDVNVLYEQIRTIYPE 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++ ++I +I + ++I P E +L I+I RV Sbjct: 240 AFRAVQKIDKYISKSFGQEIFPDEYTYLMIHINRVTS 276 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 151 KDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSL-----NYQEESLSYQRL 205 + E I+ V +T ++++ L+ + Y L Sbjct: 37 QIEEKEISKLYVLDSKDRLEHLSFLLTHSDKKIITLVNKIVDYGENYLKVKVTDYLYLAL 96 Query: 206 VTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIM 265 + H+ F R + I L VK+ YPQ ++ + ++ Y+ E + Sbjct: 97 LDHISFALKRGQKGQFI---ASPLVWEVKKFYPQYYEIGIKAINWLNQTYEVNFPEDEAI 153 Query: 266 FLAINIERVRKE 277 ++++ V+ E Sbjct: 154 PISLHFINVQDE 165 >UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDI0_9FIRM Length = 309 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI NNN V I D + + ++ G GIGFQK+ G+ ++ + IEK Y + Sbjct: 29 MKIIKIFNNNAVATISDNKNDLILTGSGIGFQKKIGDEVDENRIEKRYVYE-GGEKDAMY 87 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L P E I+ A E L QD I+LTDH FA++R++ LPN +L Sbjct: 88 QLFLRTPEEYFKLSQSIMEKAMEELNISFQDQTIIALTDHICFAVERYETGTELPNLVLD 147 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY +EF++G ++ I++ L + LP DE G+IAMH+++ + N + QL+ Sbjct: 148 EIKTLYKEEFKIGLWSVKYINQELKIDLPIDEAGYIAMHIINGANNTNSNSTMKMIQLVD 207 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND--SDESLQQAVKQNYPQ 239 + +I + + ++SL Y RLVTHLKF++ RI + D+ + + + Sbjct: 208 GCVSVISDSLGIYFDKDSLDYTRLVTHLKFMAQRIFSGIHEEEGFGDKEMISFLSNKDTK 267 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C I +I + ++S E+++L I+I ++ Sbjct: 268 ILTCITAIRNYISSTFSYELSEKELLYLMIHIYKIIN 304 >UniRef50_D1AQP8 Transcriptional antiterminator, BglG n=7 Tax=Bacteria RepID=D1AQP8_SEBTE Length = 285 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 163/275 (59%), Gaps = 4/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I++ILNNNVV+V E +V +GI F+K+ G+ I + IEK Y L S+++ S Sbjct: 1 MKISQILNNNVVIVKRGMN-EIIVYAKGIAFRKKVGQVIYENEIEKTYVLDSNDMLEHFS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLSH + ++II +++L K D + ++L DH +FA+KR Q+ + +PL W Sbjct: 60 YLLSHSEPNHITLVNQIIKYGEDKLGKKSNDYLNLTLLDHIEFALKRAQKGQFIRSPLTW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +++R YPK FQ+G AL +I +++G + P DE IA+H V+ + N+++ + + Sbjct: 120 EVKRFYPKHFQIGIYALDLIKEQIGSEFPVDEAVSIALHFVNMEEGKSNLDEAIHSMETL 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQ 239 ++++ +I + F + + E SL Y RL+THL++ R+ ++ + DE L Q +K Y Sbjct: 180 KDIISIIHYHFQITFDENSLDYMRLMTHLQYFIQRVSSNSPYSVIGDEVLNQQIKTLYSN 239 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 A+ C ++I I++ +Y ++ E +L ++I R+ Sbjct: 240 AYDCVQKIRIYVQKKYNCNLTIDEETYLMLHIHRI 274 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 5/128 (3%) Query: 151 KDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT--H 208 ++E+ + + + ++ ++ I ++S Y L H Sbjct: 40 ENEIEKTYVLDSNDMLEHFSYLLSHSEPNHITLVNQIIKYGEDKLGKKSNDYLNLTLLDH 99 Query: 209 LKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLA 268 ++F R + I L VK+ YP+ +Q I Q + E + +A Sbjct: 100 IEFALKRAQKGQFIR---SPLTWEVKRFYPKHFQIGIYALDLIKEQIGSEFPVDEAVSIA 156 Query: 269 INIERVRK 276 ++ + + Sbjct: 157 LHFVNMEE 164 >UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium perfringens RepID=Q0TV06_CLOP1 Length = 282 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 150/276 (54%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSS-GIEKEYALSSHELNGRL 61 ++ + NNN+V+V DD ++E ++ +GIGF + G I + IEK + + Sbjct: 9 YEVKRAFNNNIVLV-DDDEKEIILFAKGIGFNCKKGSIIPENTNIEKIFTIQDENNIANF 67 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ + +A C+ +I +L + I+I L DH FAI+R ++ +L NP L Sbjct: 68 RRVVGSNDEKFIAFCEELILEISRDFSEELNEIIHIGLIDHISFAIERMKKGEILRNPFL 127 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LYPKEF+ + + ++ GV + DE+GFIAMH+ SA+ +G + T + Sbjct: 128 VEIETLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIAMHIHSARTTGKISHTIKFTYIA 187 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ I+ F++ SLSY R ++HL+F R++ + + + L +K YP++ Sbjct: 188 NTAVEYIEDAFNIEVDRTSLSYARFISHLRFAIERLINNTPVKN---ELLSIIKLKYPES 244 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ AE I I + +++ EI +LA+++ER+RK Sbjct: 245 FKVAEEIGKAINEDFSLEVAEDEIGYLALHVERIRK 280 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%) Query: 72 VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEF 131 + T I A Y H +FAI+R N + N LL I+ YP+ F Sbjct: 186 IANTAVEYIEDAFNIEVDRTSLSYARFISHLRFAIERLINNTPVKNELLSIIKLKYPESF 245 Query: 132 QLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 ++ EE I++ +++ +DE+G++A+H+ + + Sbjct: 246 KVAEEIGKAINEDFSLEVAEDEIGYLALHVERIRKNE 282 >UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-binding region n=2 Tax=Bacilli RepID=B1MZ35_LEUCK Length = 286 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 157/276 (56%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K LN N V+ +D+QQ+E ++ G+GIG+ K+ G++++ S + + + ++ Sbjct: 1 MLVKKSLNANAVIAVDNQQQEFILFGKGIGYGKKNGDKVDESIVNQTFMPLNNTEIKEYV 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL IP+ ++ RI+S A++RL KL +YI L+DH FAI+R + + N W Sbjct: 61 QLLEAIPITILDATRRIVSEAEKRLNTKLNPMLYIMLSDHLNFAIERAMTGINITNRAFW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA-GVTQLM 180 +++ YP+EF LG AL +I++++ + LP++E IA HL++AQ + ++ L+ Sbjct: 121 EMKNYYPEEFDLGLFALQVIEQQMNIVLPEEEAANIAFHLINAQTAEGIKKDGLNYANLI 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 M +++ N ES+ YQR +THLKF + R + D + L + V YP+A Sbjct: 181 SSMTTILRHSMGQNIDIESVHYQRFITHLKFFAERFFADKMLIDDNSKLFETVATAYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A I ++ Y +K++ E+ FL ++I R+R Sbjct: 241 TEVAFTIKDYLTTVYDKKMTKEELTFLIVHINRLRN 276 >UniRef50_C7BJX4 Cryptic beta-glucoside bgl operon antiterminator n=2 Tax=Photorhabdus RepID=C7BJX4_PHOAA Length = 284 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 168/280 (60%), Gaps = 7/280 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + I K++NNNVV+ ID+ E ++M +GIGF K+ G+R++ I K + + H ++ Sbjct: 1 MLTIIKLINNNVVLAIDENNSEMILMDKGIGFNKKKGDRLHVQDIAKVFTVEKHY---KI 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 S++LS IP+ V+ ++II++ + L L DS+ I+L++H FA +R + + N L Sbjct: 58 SQILSTIPVSVIELTEQIITIGKNFLAKPLNDSLLITLSEHLSFAFERVNKGYQIGNVLQ 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W+I LYP E+++G++AL I+ ++ L + E IA+H V+AQ M D +T L Sbjct: 118 WEIPHLYPLEYEVGKQALIHINNQIKQPLSQIEASLIALHFVNAQYEGQTMGDTLKLTNL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNY 237 + + ++LI + F +N S++Y R +THL++ R + + + D SLQ+ +++ Y Sbjct: 178 INKTVKLIHYYFHVNLDPTSVNYSRFITHLRYFLIRQNNNDHSSTIEMDFSLQELIEEKY 237 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ CA ++ ++ +YQ K+ E+++L I+IERV + Sbjct: 238 FKSYNCAVKLIKYLREKYQWKVPDDELIYLVIHIERVVND 277 >UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=Lactobacillus RepID=Q040S8_LACGA Length = 282 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 152/278 (54%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+IT+ILNN+ V+ + E + +G+GI + K+ G+ + I K + S L Sbjct: 1 MKITRILNNSAVISENQDHEEIIALGKGIAYGKKVGDEFDKQKIYKIFTPLSDSQRKLLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E + +I+ + E +L DS+YI+LTDH +++R ++ + L N +W Sbjct: 61 ETIHETDPIFFQISQKIVDRLKHEENIELADSVYITLTDHLATSVERAKKGLYLSNKFIW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YPKE++ G AL ++D + + P+DE GFIA+H++S ++ ++ D + ++ Sbjct: 121 EVKNYYPKEYRYGLWALKLLDAQFDLNFPEDEAGFIAVHIISGELGNDISDFSKSVDFIK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAVKQNYP 238 + +++++ F ++ +SL+Y R HLKF ++ + D + +K + Sbjct: 181 SITKIVRYYFHIDIDYQSLNYNRFAVHLKFFWKAMMYKKDQSSFGDLSREILNVIKNSDI 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A++CA +I +I +Y +++ EIM+LAI+I ++ Sbjct: 241 EAYKCALKIKEYISEKYNYELNNEEIMYLAIHINKIVH 278 >UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococcus faecalis CH188 RepID=C7V767_ENTFA Length = 283 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 151/276 (54%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KILN N ++ +D+ ++E V G+GIG+ ++ G+ ++ I + + + Sbjct: 1 MIIRKILNPNTILAVDEDKKEYVFFGKGIGYSRKIGQAVDDEEINRVFIPVDNRQIQEYL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L IP +II A++ L KL S++ +L+DH F+I+R + + + N + W Sbjct: 61 RLFDSIPAVYFDITQQIIKKAEKLLNTKLNTSLFFTLSDHLNFSIERHKNGLNILNRVFW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 +I+ YP EF +GE AL ++ K LG LP++E +A H+++AQ ++ + +L+ Sbjct: 121 EIKNYYPIEFSVGEYALKLLKKELGQILPQEEAANVAFHIINAQTIASSTSKGLEYAKLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + ++K++ +++ E + YQR +THLKF R E I ++D SL + + Q YP+A Sbjct: 181 GGISDIVKYELKMDFDREDVHYQRFITHLKFFVERYYEGKMITENDSSLFEQIAQLYPKA 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A + +I + K++ E+ +L ++I R+ Sbjct: 241 LTVAFNVKDYIEIINDNKVTKEEVAYLTVHINRLMS 276 >UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillales RepID=B7GIF9_ANOFW Length = 281 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 156/276 (56%), Gaps = 2/276 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I K+LNNNV++ E V++G+GIGF K+ G+ I +EK + L + + Sbjct: 5 FRIEKVLNNNVLIASHPTYDEVVLIGKGIGFGKKKGDVIAQKDVEKWFILKNEREQEQYK 64 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL H+ E + + II Q+R L + I+++LTDH FAIKR +Q + + NP L Sbjct: 65 KLLPHVDEEFIGLMNDIIHHIQKRTNSSLNEHIHVALTDHILFAIKRLEQGMDIKNPFLV 124 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LYP E+ + E + ++++RL +QLP+ E+GFIA+H+ SA + + +V +QL+ Sbjct: 125 ETKSLYPLEYDVATEVVNMLNERLRIQLPEGEIGFIALHIHSALTNHQLSEVNQHSQLIS 184 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++ +++ Q + ES+ Y R V HL++ R+ + + + + L +K+ YP + Sbjct: 185 RLVSVVEKQLDIRIDRESIHYLRFVRHLRYAIERVKKGEKMEEPKK-LSNILKETYPLCY 243 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + ++ + Q + AE ++L ++++R+ + Sbjct: 244 NLSWKLIKIMQQTLQLPVDEAEAVYLTLHLQRLTGK 279 >UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GB96_9ACTN Length = 283 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 138/280 (49%), Gaps = 9/280 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + LNNN V+ D RE V +G+GIG+ ++ S +E+ + E Sbjct: 1 MLAIRKLNNNAVICRDSLNREVVALGKGIGYGGDFPRELDISTVERTFYSVDAEG----Q 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P +V+ +++ + L + + + + DH FAI R ++ + L + Sbjct: 57 RIMRDLPADVLIFTAKVMDIVSNELPYEVSPNAVLIMADHLAFAIARQKKGICFDMTLAY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 D+++LYP E+++G + + + +GV+LP +E+ IAM+LV+A+ E + + Sbjct: 117 DVRQLYPLEYKIGRYIVARLRQEMGVELPHEEIASIAMNLVNAKTGAEAEASSDRARSFE 176 Query: 182 EMLQ----LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ++L +++ F E+ Y R TH+++L RI +I+ ++ L + + Sbjct: 177 QLLNDVTAIVERDFRTIIDRETFEYSRFATHVQYLFRRIQGGENISSANLPLYGNSLEEF 236 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 P+ C + I+ I + +++ E ++L +++ R+ + Sbjct: 237 PELASCIDHISTCIERSWGTRLTDEEKLYLMLHVNRICSQ 276 >UniRef50_B9Y2L9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2L9_9FIRM Length = 311 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 147/276 (53%), Gaps = 3/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 + + +I+NNN+V+ D + E V +G+G+GF+K+ + I+S + K Y L +L Sbjct: 26 TLLVKRIINNNIVIAEDFKGHEVVAIGKGLGFRKQKYDVIHSREVMKTYVLVDGSARPQL 85 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L +P E++ RII +AQE L ++ ++L DH QF++ +++ +P + Sbjct: 86 LSLFEQVPFEIIELTQRIIDIAQEDLKMTFNVNLVVALADHIQFSVNQYKAGFDMPALVN 145 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +++R Y E+++G++A+ +I++ L +QL ++E IA HL++A D + Q + Sbjct: 146 EEVKRFYKDEYEVGKKAVRLINETLHIQLKREESTSIAFHLITAAEKRPNHDALRIMQGV 205 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE--SLQQAVKQNYP 238 E+++L++ L E+S++ R + HLKF IL S+ Y Sbjct: 206 SEIIKLVEQTLDLTLDEDSMAVSRFIIHLKFFMRSILFEQVRRSEGSLGSMLSQFSTGYE 265 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 QA +C + I+ ++ Y ++ + ++L I+I R+ Sbjct: 266 QASRCVDLISNYVLEHYAYSLTDEDRLYLMIHIVRL 301 >UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBW1_MACCJ Length = 283 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 159/281 (56%), Gaps = 6/281 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSG---IEKEYALSSHEL 57 M + K+LNNNVV+ D+ E +++G+GIGF K++G + S IEK + L S Sbjct: 1 MKYHVLKVLNNNVVITEGDEG-ETILIGKGIGFGKKSGAVLKDSELEHIEKIFKLKSSSE 59 Query: 58 NGRLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLP 116 R LL+ EV+ T +I + ++ D+I +SLTDH FA+KR+Q+ +++ Sbjct: 60 QERYKSLLTLTNDEVIQTVIEVIEFIDHKTNGEMNDNILLSLTDHIIFALKRYQEGIIVA 119 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV 176 NP L + + LY +EF + E+ + +++ RL VQ PK EVGFIA+H+ S+ + ++ D+ + Sbjct: 120 NPFLKETESLYRQEFLIAEQVVAMLNDRLQVQFPKTEVGFIALHIHSSVNNHSLRDMRLM 179 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 T++++ + +I+ + ++S++Y R + H+ F R++ + + L+ +KQ Sbjct: 180 TEVVQNAITIIEQDLKVIVDKDSITYSRFLRHITFTVQRVMSDERMPEQKT-LENLLKQQ 238 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP + + +I + + + +E+++L ++I+ E Sbjct: 239 YPLCYNTSVKIVKMMQTYLNKPVYDSELVYLTMHIQAFNTE 279 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 55/141 (39%), Gaps = 14/141 (9%) Query: 138 LTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 L I+K ++ ++ + ++ ++ V Q + E+++ I + + + Sbjct: 45 LEHIEKIFKLKSSSEQERYKSLLTLTN---------DEVIQTVIEVIEFIDHKTNGEMND 95 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 L L H+ F R E + + + + Y Q + AE++ + + Q Sbjct: 96 NILL--SLTDHIIFALKRYQEGIIVAN---PFLKETESLYRQEFLIAEQVVAMLNDRLQV 150 Query: 258 KISPAEIMFLAINIERVRKEH 278 + E+ F+A++I H Sbjct: 151 QFPKTEVGFIALHIHSSVNNH 171 >UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=A7GGX3_CLOBL Length = 275 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 81/274 (29%), Positives = 165/274 (60%), Gaps = 5/274 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 N + K+LNNNV++ + ++ + +++G+GIGF + GE ++ IEK Y ++ +++ Sbjct: 3 NYTVKKVLNNNVIIA-NWREEDAILVGKGIGFNSKKGEVLSKDKIEKVYIKTTSKMSENY 61 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++L +I +++ + II+ +++ L KL + ++ISL DH FA++R ++ + + NP L Sbjct: 62 NKVLDNIDNKIVGISEEIINFSEKALNTKLNEGVHISLPDHINFALRRIEKGINIENPFL 121 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 ++ +YPKE+++ +AL +I++RL V LPKDE GFI +H+ + + + T+ + Sbjct: 122 EELGIIYPKEYEIAMKALNMINERLKVNLPKDEAGFICLHIRAGITKQQVSESLAYTKKI 181 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++++LI + SLSY R +THL F+ R+ E +I + L ++K+ Sbjct: 182 SKVMELISKLKGKPLDKNSLSYVRTLTHLNFMIERVKEDKTIKN---ELLDSIKEEMKSE 238 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A ++A+ I ++ KI EI ++A++++R+ Sbjct: 239 FSIAIKVAMLIEKLFEIKIPEDEIGYIALHLKRI 272 >UniRef50_B0MGY1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGY1_9FIRM Length = 274 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 161/276 (58%), Gaps = 7/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+ITK +NNNV + +D + +E V+ G+GIGF + E + S I K + +++ Sbjct: 1 MRITKKINNNVALGVDPKGKEVVIFGKGIGFHEIPYELNDLSLISKTFY----DIDPGYL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ELLS IP ++ +I+ A+ ++G +L S+ L DH F + R ++++ + NPL Sbjct: 57 ELLSEIPEDIFNVSSKIVDYARSKVGCELNPSLAFMLADHINFGVIRLKKSIDITNPLTN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLM 180 DI+ LY E ++G +AL +I++ L ++ PK E IA+H+++A+ M +M + VT+++ Sbjct: 117 DIKYLYKTEMEIGYKALDMIEEDLQIRFPKGEAASIALHIINAEGMQNDMNNTIKVTKIL 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAVKQNYPQ 239 +E+ ++++ F ++S+ Y R V HLK+ R+ E ++DS + L +++K +P Sbjct: 177 KEITKIVEESFDFKIDQDSIDYSRFVIHLKYFVQRVKEPKEKVSDSTKLLLKSIKAQFPD 236 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + C ++I ++ + K S + ++L ++I R+ Sbjct: 237 TYGCFKKIESYLKKTLKLKYSEEDQLYLLVHINRIL 272 >UniRef50_A3CN37 Transcriptional antiterminator, BglG family, putative n=3 Tax=Streptococcus RepID=A3CN37_STRSV Length = 280 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 93/276 (33%), Positives = 161/276 (58%), Gaps = 8/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I+KILNNNVV+ + Q E ++MGRG+ F ++ G+ I IEK+Y LS + Sbjct: 1 MLISKILNNNVVISE-ENQEEVILMGRGLAFGRKVGQEIPDELIEKKYILSENRR----- 54 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P EVM D+I+S A+E+L K L+DS ++++ DH + R + ++ L N L+W Sbjct: 55 QLLMELPAEVMEMSDKIVSFAREKLQKKLKDSAFLAMADHIHGVLLRLEDDIYLKNFLMW 114 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 DI+R +P EF++G+ A ++ + +LP DE F+A+ LV+A++ +T +M Sbjct: 115 DIKRFFPIEFEVGQYAKQLLSAYVSKELPDDEAAFMALTLVNAELENGDGTARDLTMMME 174 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND-SDESLQQAVKQNYPQA 240 E++ ++K+ ++ EE + +R +THLKF R+L D D + +K YP A Sbjct: 175 EIMTIVKYSLEISLDEEDIYLERFMTHLKFFCERVLTDNGHRDLEDNEMFDLLKCKYPLA 234 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +IA F+ + S E ++L I++ R+++ Sbjct: 235 YETTRKIAEFLKQTRNYQTSEDEQLYLTIHLSRMKR 270 >UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clostridium RepID=A6M213_CLOB8 Length = 284 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 157/274 (57%), Gaps = 6/274 (2%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINS-SGIEKEYALSSHELNGRLSE 63 I K NNN+V V + +E+++ +GIGF +++G+ I + +EK + + + + Sbjct: 10 IIKSYNNNIVSV-NMNGKERILFAKGIGFGRKSGDTIEKGTEVEKIFVIEDEDNLRNFKQ 68 Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ ++ E C+++IS L L + I+++L DH FA+KR + NP L + Sbjct: 69 VIENVDEEFFVLCEKMISYVANELKENLDERIHVALVDHLNFAVKRLSDKEEIENPFLME 128 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ LYP+E+ L E+ ++ V++P+ E+GFIA+H+ SA+ SG + + T L+ Sbjct: 129 IRALYPQEYSLAEKVAEVLQNEKKVKIPEGEIGFIALHIHSARNSGKLSNTIKNTHLINS 188 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +++ ++ + + + SL Y R +THL+F RIL+ SI + + +K Y +++ Sbjct: 189 IIEYVEAKTEIKIDKTSLDYARFLTHLRFAIKRILDDISIEND---FIKEIKSKYKLSYK 245 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ +A + L+ ++K+S EI +LA++IER RK Sbjct: 246 VSKGVAKILVLKLEKKVSDDEIAYLAMHIERFRK 279 >UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAF5_9ACTN Length = 272 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 148/269 (55%), Gaps = 6/269 (2%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALS-----SHELNGRLSELLSHIP 69 +V D E +V+GRG+ F + AG+ I+ + +EK YAL RL+ LL IP Sbjct: 1 MVTSDDGSELIVIGRGLCFGRHAGDAIDEASVEKTYALQEGTSQDSRTIDRLAHLLESIP 60 Query: 70 LEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYP 128 + + I+ + + L + D I I+L DH A++R ++ + NPLL +IQ+ Y Sbjct: 61 TVNLVISEDIVQMLRRELNVDINDKILIALADHISLALERERKGISCENPLLLEIQQFYR 120 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIK 188 KE+ L AL II + +G+Q+ ++E GFI +H+V+A M + + QL+R++L ++ Sbjct: 121 KEYALAGRALQIIKEYMGIQMSEEEQGFITLHIVNATMPQRSDRLIVSVQLVRDVLAIVS 180 Query: 189 FQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIA 248 +++ + SL Y+R V HL+F + R L+ + + ++L + + YP A+ CA+ IA Sbjct: 181 KRYATTLDDTSLPYERFVRHLQFFAQRALDPTAGQINGDALFRIDETAYPCAFLCADAIA 240 Query: 249 IFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y ++ AE +LA +I + E Sbjct: 241 AHLSSTYNVVVTDAEKSYLAYHIVNLLGE 269 >UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=B1IKY9_CLOBK Length = 285 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 156/276 (56%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERIN-SSGIEKEYALSSHELNGRL 61 Q+ K+ NNNV++V ++ EK++ +GIGF K G+ I I+K + + + Sbjct: 9 YQVIKVFNNNVLLVCKNK-EEKILFSKGIGFGKHPGDNIPFDIKIDKIFTMQNENNFNNF 67 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L+S++ +++ C+ +IS+ + L L + I++SLTDH + IKR +N + NP L Sbjct: 68 KFLMSNVDSDIIGLCEEVISMISDELNEPLNEKIHVSLTDHISYTIKRLMENNSIENPFL 127 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + LY +EF + ++A+ +++ RL + +P +E GFI +H+ SA+ G + + L Sbjct: 128 VETETLYKREFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSARNEGKLSNTIKYAFLS 187 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L++ + ++ + SL Y R +TH++F RIL + I + L A+K Y + Sbjct: 188 NTIIELLEDELNMEIDKSSLDYARFLTHIRFAIERILNNTPIKN---ELLTAIKNQYKIS 244 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ A++++ I + +S E ++AI+IE+ R Sbjct: 245 YKLAKKVSKIIEDELSVNVSKEETAYIAIHIEKFRS 280 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + + L E++ +I + + E+ L H+ + R++E+ SI + Sbjct: 72 SNVDSDIIGLCEEVISMISDELNEPLNEKIH--VSLTDHISYTIKRLMENNSIEN---PF 126 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + Y + + A++ + + I E F+ ++I R E Sbjct: 127 LVETETLYKREFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSARNE 174 >UniRef50_C9A6G2 Regulatory protein n=2 Tax=Enterococcus RepID=C9A6G2_ENTCA Length = 278 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 86/278 (30%), Positives = 162/278 (58%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++I KILNNN V+V D ++ + +G G+GF+ + G+ + S IEK + L ++++ R Sbjct: 5 LKIKKILNNNAVLVGQD-GKDFIWIGTGLGFKMKPGQTADESKIEKVFVLHKNKVSERFL 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS IP ++ D IISLA+ + + L +++Y+SLTDH K +Q + + N L W Sbjct: 64 SLLSSIPTNYVSLADDIISLAKAEIKQELSETLYVSLTDHLYNLFKLHEQGITVTNRLSW 123 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME---DVAGVTQ 178 +I++ YP+EF++G++AL +I + G+ ++E G IAMHL++AQ++ ++ DV + + Sbjct: 124 EIKKFYPQEFEVGKKALEMIGQETGIVFEEEEAGNIAMHLINAQVTDEVDQPKDVQSIAK 183 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +R+++ LI+F + E SL++ R +THL+F R+ + ++ L V Y Sbjct: 184 KIRDIISLIRFSNKIQIDENSLAFDRFITHLRFFFQRLKARPDVVKAN-PLLGHVSGQYA 242 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A++ I ++ E ++L ++I+++ + Sbjct: 243 DAYKTML----LIEKYLDVPLNDDEKLYLTLHIQKLIE 276 >UniRef50_B9YD06 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD06_9FIRM Length = 278 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 145/275 (52%), Gaps = 6/275 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNV + ID +E + +G+GIGF+ E + SGIE+ + + Sbjct: 1 MKVIKKINNNVALCIDQGGKELIALGKGIGFKAMPYELQDLSGIERTFYAVKTDTLP--- 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L I E+ A I+S ++RL K + DS++ L DH FAIKR + ++ ++ Sbjct: 58 -VLDEIDEELFADTGYIVSQIRQRLKKEISDSLFFVLVDHLNFAIKRARAHIYFQFSIVS 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-VTQLM 180 ++ ++Y E Q G+ A+ ++ + GV+LP DE IA+H+V + + VT+++ Sbjct: 117 EVVQMYQMEMQAGQWAVDYLNDKYGVKLPSDEAAIIAIHIVGSYDDESYSRELENVTKII 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ +I+ + + + +Y R V+HL +L R + +I ++ L +Q +P Sbjct: 177 GQITDIIEDRMHIQLDRTNFNYSRFVSHLMYLLKRQRDKTAIISTNHQLFDQTRQAFPAV 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +QCA I + + IS E+++L ++I R+ Sbjct: 237 YQCALAIRKTLEENQKMIISDEELLYLMLHINRMI 271 Score = 42.2 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 15/131 (11%), Positives = 47/131 (35%), Gaps = 5/131 (3%) Query: 42 NSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDH 101 + + I + + S++ EL + +++ II + Y H Sbjct: 147 DEAAIIAIHIVGSYDDESYSRELENVT--KIIGQITDIIEDRMHIQLDRTNFNYSRFVSH 204 Query: 102 CQFAIKRFQQNVLL---PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIA 158 + +KR + + + L ++ +P +Q +++ + + +E+ ++ Sbjct: 205 LMYLLKRQRDKTAIISTNHQLFDQTRQAFPAVYQCALAIRKTLEENQKMIISDEELLYLM 264 Query: 159 MHLVSAQMSGN 169 +H+ + Sbjct: 265 LHINRMIDRED 275 >UniRef50_C9A723 BigG family transcription antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A723_ENTCA Length = 280 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 148/274 (54%), Gaps = 3/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I K +NNNVV+ + + E ++MG+GIGFQ + G+ I + IEK+Y +S Sbjct: 1 MKIIKRINNNVVLSK-EDEVEVILMGKGIGFQTKPGDPIPAERIEKKYYPEDDLTVEHMS 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++++ + MA I+ L ++ + ++Y +L DH FAI R +Q ++L NP+ W Sbjct: 60 KVMTKADEKQMAVIYEIVRLFRDSVGTDFNPNVYFTLMDHILFAISRQKQEIVLTNPMHW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-AGVTQLM 180 +I+++Y KE+ + +A+ +I K L ++E FI +H V+AQ+ + T+L Sbjct: 120 EIKKIYAKEYAVSVQAVELIRKELYPDFSQEEAAFITLHFVNAQIEKSANQSAYEHTELT 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +L+++K+ ++ + E S +QR VTH+++ R + + +YP+ Sbjct: 180 NNILRIVKYSMNIEFDENSSYFQRFVTHIRYYLIRQSQEKEEPVLANPMIALAFSSYPKE 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 + A+ I ++ Q ++ E+M+L ++I + Sbjct: 240 KETADSIKEYLFEQKGWHVNDMELMYLILHIGNL 273 >UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MNU4_9FIRM Length = 275 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 164/276 (59%), Gaps = 7/276 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +++ KILN+NVV+ D+ QR + G GIGF K++G+ ++ + I Y L + R Sbjct: 1 MLKVEKILNHNVVLCRDESQRNLIAFGTGIGFNKKSGDSLDEARIVNLYGLKN---LARY 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L+S ++++ ++II +E +I++SL DH QF++KR+++N+++ N L Sbjct: 58 EKLISETEDQIVSLSEQIIRELEECFSQDFDRNIHVSLLDHLQFSVKRYRENMIVQNVFL 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + YPKEF ++AL ++++ L + LP E GF+ MH+ +A ++ Q+M Sbjct: 118 DETAYFYPKEFAFAKQALAMVNESLKINLPLSEAGFLCMHIHAALHHEDLSFTNFSFQVM 177 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++L LI+ ++ ++ + QRL+TH++F R LEH+ I + LQ+ +++ Y +A Sbjct: 178 QDILGLIETDLGIDLKQYEDARQRLMTHIRFAIKRSLEHSEIQND---LQEVIQERYVRA 234 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A++I+ + +Y ++ AE+ +L+I++E + + Sbjct: 235 FALAKKISTVVQEKYDLSLNEAELAYLSIHLENIIR 270 >UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium difficile RepID=Q184L9_CLOD6 Length = 278 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 166/276 (60%), Gaps = 3/276 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I KI NNNVVV + E +V G G+GF+K+ G+ I+ + I K+Y + + + + Sbjct: 1 MNIKKIFNNNVVVSSLEDGTEIIVTGAGVGFKKKVGDLIDENLISKKYFVQD-DQRDKYN 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++L+ +E + II A E L ++ DSI ++LT H +FA++R +Q + LPN +L Sbjct: 60 QILNKTSIEYFKISEEIIEKANEVLNTQVNDSIILALTSHIEFAVQREKQGIKLPNLILN 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + ++LY +EF+ G A+ I+KR+G++LP+DE G+IA+H+++ + ++ + + + Sbjct: 120 ETKQLYREEFEFGLWAIDEIEKRIGIKLPEDEAGYIAIHIINGLENSQKDEGINILEFSK 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 +++Q+I+ SL+Y RL+THLKF RIL + NDSD E + + V +NY + Sbjct: 180 QVIQIIEEVHGFKLDVNSLNYTRLITHLKFFVQRILRKETYNDSDIEDMYKLVNKNYNKP 239 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C E IA + +++ KIS E ++L I+I ++ Sbjct: 240 KVCTEEIAALVLDRFEYKISKEEELYLMIHINKITN 275 >UniRef50_C9XM49 Putative transcription antiterminator n=4 Tax=Clostridium difficile RepID=C9XM49_CLODC Length = 282 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 163/277 (58%), Gaps = 2/277 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITK+LNN++++ DD E ++MG+GIG +AG +N IEK + L + + Sbjct: 1 MYITKVLNNSLLLAKDDNDEEIILMGKGIGHNYKAGSELNKKDIEKIFVLHDENIKKSII 60 Query: 63 ELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L + I E II+ ++ KL + IY++LTDH FA++RF++ +++ N L+ Sbjct: 61 QLATEIDAEYFGIAQMIIAYGIEKYNLKLMNHIYLALTDHIAFAVRRFKEGIMIENHYLF 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT-QLM 180 +I+ PKE+ +G+ A+T+ + LG+ LP++E+G IA H ++AQ D + +++ Sbjct: 121 EIKEFNPKEYDIGKYAITVFKEVLGLDLPEEEIGNIAGHFINAQQDNPYSDRNKRSAKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +LQ++ + FS+ Y +ES Y+R V HLK S R L + + + + + V++N + Sbjct: 181 NAILQIVHYHFSIVYNKESFYYRRFVMHLKAFSQRFLANEPSREKIDFIYEQVQKNCKEE 240 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++C +++ ++ +Y R++ E ++L I+I ++ E Sbjct: 241 YECVKKVGAYMYKEYSRELPRQEELYLMIHIHKILGE 277 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 3/87 (3%) Query: 192 SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFI 251 N + + Y L H+ F R E I + +K+ P+ + + Sbjct: 84 KYNLKLMNHIYLALTDHIAFAVRRFKEGIMIENH---YLFEIKEFNPKEYDIGKYAITVF 140 Query: 252 GLQYQRKISPAEIMFLAINIERVRKEH 278 + EI +A + ++++ Sbjct: 141 KEVLGLDLPEEEIGNIAGHFINAQQDN 167 >UniRef50_B6GAR4 Putative uncharacterized protein n=2 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR4_9ACTN Length = 295 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 10/277 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ + +NNNV + +D E V MG+GIGF K + + S + Y RL Sbjct: 13 MQAIRSINNNVAICVDAGGNECVAMGKGIGFGKMPRD-VALSEVTHTYYSVD----PRLL 67 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 E + IP +V+ R + L L ++ L DH FAIKR ++++ + PL + Sbjct: 68 EGIKEIPQDVLLFAARAAEHVRAELSYALSPNMAFLLADHIAFAIKRAREHLQVRMPLAY 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 D++ YP+E+++G + I K V L DE IAM+LV++++ E A +Q Sbjct: 128 DVEHNYPEEYRVGLRLVRQIRKEFLVDLGDDEAAGIAMNLVNSRLESVSEQDAARSQSDD 187 Query: 182 EMLQLIKFQ----FSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 ML+ I F L S ++ R THL +L R+ + S + + ++ Sbjct: 188 IMLEEITEIVEEEFGLRVDRASFAFSRYATHLHYLFARLHRGEVLRTEAISGLEGLFDHF 247 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 P+ C ERIA I + + E +FL ++I R+ Sbjct: 248 PEGVACVERIADHIMDAWGVTLDADEKLFLVLHISRI 284 >UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium RepID=A0Q2H7_CLONN Length = 279 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 142/275 (51%), Gaps = 6/275 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGRLS 62 +I K+LNNNV++V D + + +++G+GIGF K++GE I + SGIE ++ Sbjct: 5 RIIKVLNNNVILV-DSECIQYILVGKGIGFGKKSGEIIKDFSGIESKFISLQGLDINASL 63 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + +++ ++ I+ + E L +++++L DH QF +KR + ++L NP L Sbjct: 64 QFTNNLDPKIAELTKDILKIISEEFSRPLNPNVHVNLIDHIQFTVKRLKSGMILENPFLT 123 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + + LYPKE+ + E+A+ I+ K L + P E+GFI +H+ + +D QL+ Sbjct: 124 ETKLLYPKEYAVAEKAVEILSKGLNMHFPDAEIGFITLHICGGLNEKSKKDALENAQLIN 183 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 +L + + ++ S Y+ V HL+ + RI + + ++ L +K+ + Sbjct: 184 TILNFVSKKLNITLDPHSFEYKGFVNHLRGVLNRIKNNKILKNN---LLTELKKRNIIEY 240 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + A ++ I Q + EI ++ I+I ++ Sbjct: 241 KIAYDVSKIIENVLQISVPEDEIGYITIHIMKLNS 275 >UniRef50_A6LRF6 Transcriptional antiterminator, BglG n=2 Tax=Bacteria RepID=A6LRF6_CLOB8 Length = 278 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 160/277 (57%), Gaps = 4/277 (1%) Query: 2 NMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 ++ K LN+N V+ I+ D +E +++G+GIGF K+ ERI + Y L G Sbjct: 1 MFRVIKALNHNGVLAINMDNYKEYILLGKGIGFGKKVNERIEAPENAHIYLLQQETERGL 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 E++++I +++ + II A+++ ++ ++I L DH FA+KR + N + NPL Sbjct: 61 TKEIINNIEPQILEIANNIIMEAEKKFHEVDENILCPLADHIAFAVKRIRDNEQISNPLT 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+P+E+++ + II + G+++ +DE+G+IA+H+ S+ + + V L+ Sbjct: 121 QDIKALFPEEYEVACKGKDIIKEIEGIEINEDEIGYIALHIHSSLGNEKVSQAMQVAMLV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 R + I+ ESLSY RL+ H+K+++ R+L+ +I + + + +P++ Sbjct: 181 RSCITSIEESTGKTIDIESLSYNRLMNHIKYMAARMLKGETIK---LDMNDYISERFPKS 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ AE I + +G + ++KI EI +LA++IERV + Sbjct: 238 FEIAEDICMKLGKELKKKIKSVEIGYLAMHIERVFSD 274 >UniRef50_C2C005 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C005_LISGR Length = 301 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 162/279 (58%), Gaps = 6/279 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 NM + K +NNNV++ + +E +V G+GIGF+ + ++ + +E+ + + ++ Sbjct: 22 NMIVKKRINNNVILAE-ENAKEMIVTGKGIGFRAYPKDEVDQTKVEQLFLPTGKWDTMQI 80 Query: 62 SELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL + + + II + ++ L + +Q + +SL DH FA++R ++ + + +P+ Sbjct: 81 AALLKDTDIADIQLAEAIILIGEKLLQQKIQRTSMLSLLDHIIFALERSKEKIAMKSPIE 140 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN--MEDVAGVTQ 178 W+++ YP+E ++GE+A+ +I++ GV+LP+ E FIA+H V Q+ + M ++ + Sbjct: 141 WEVKHFYPQEMKIGEQAVELINRIKGVKLPESEQIFIALHFVHYQIDSSATMPEMMTYLE 200 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLK-FLSWRILEHASINDSDESLQQAVKQNY 237 +R++ Q+IKF+F + E+S+ +QR + HLK +L R + L + +K++Y Sbjct: 201 TIRDITQMIKFEFQMEIDEDSVYFQRFLHHLKCYLLIR-KGEEQKRFIRQPLARLIKEDY 259 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + ++CA +I ++ +Y S E ++L +++ R+ + Sbjct: 260 QREFKCARKIDCYLTEKYGVAPSSDEQVYLTLHLARLIQ 298 >UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFN4_EXIS2 Length = 259 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 147/253 (58%), Gaps = 3/253 (1%) Query: 27 MGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQER 86 MG GI F K+ + ++ + IEK + S E + E+L+ PL+++ ++IIS A+ Sbjct: 1 MGPGIAFGKKKKDPVDPTKIEKMFIP-SFENAEQFKEILTTTPLDIIDLSEQIISYAEGE 59 Query: 87 LG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRL 145 L D I++SLTDH A++ ++ +++ N L +I+ LY E+Q+GE A+ I+++L Sbjct: 60 LKTPFHDYIHVSLTDHLAHAVRLAREQLVVHNRLAEEIRLLYTAEYQIGEWAVAHIEQKL 119 Query: 146 GVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 V LPK+E IA+HL +A+ NM L+ E+ + I+ F + S++Y R Sbjct: 120 AVSLPKEEAANIALHLYNARQRHPNMATALQTATLLNELREQIEAFFGQTIETTSMTYYR 179 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEI 264 TH+K + RI + +++D D + AVK Y A++CAE +A ++ + Q + +E+ Sbjct: 180 FFTHMKLVLARIEQGQTLHDMDNVILSAVKTRYTDAFRCAENMAAWLEQELQTTVPQSEV 239 Query: 265 MFLAINIERVRKE 277 ++A+++ER+R + Sbjct: 240 GYMALHVERIRPD 252 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 147 VQLPKDEVGFIAMHLVSAQMSGNMEDVA-GVTQLMREMLQLIKFQFSLNYQEESLSYQRL 205 V K E FI + Q + + L +++ + + + + L Sbjct: 15 VDPTKIEKMFIPSFENAEQFKEILTTTPLDIIDLSEQIISYAEGELKTPFHDYIH--VSL 72 Query: 206 VTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIM 265 HL E +++ L + ++ Y +Q E I + + E Sbjct: 73 TDHLAHAVRLAREQLVVHNR---LAEEIRLLYTAEYQIGEWAVAHIEQKLAVSLPKEEAA 129 Query: 266 FLAINIERVRKEH 278 +A+++ R+ H Sbjct: 130 NIALHLYNARQRH 142 >UniRef50_C7CXK4 BglG family transcriptional antiterminator n=1 Tax=Enterococcus faecalis T2 RepID=C7CXK4_ENTFA Length = 282 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 153/277 (55%), Gaps = 8/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K LNNN+V+V D EKV+ G GIGF+KR G+ I+ S I K + ++ E Sbjct: 12 MIVVKTLNNNIVLVQDQMGNEKVLFGTGIGFKKRQGDSIDESLISKIFTPNAEEQTDHK- 70 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 + + E+++ RII + L + + SL DH F+I Q+N NP+ W Sbjct: 71 --IDNFQPEILSVSARIIESGELILNQKFGTGLLFSLADHLTFSIYSIQEN---DNPIKW 125 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 ++ LY KE+Q+G++AL I+ +GV L +E FIA+H V+AQ+ NM D +T+++ Sbjct: 126 EVPHLYYKEYQIGKKALEIVQNEMGVTLLPEEASFIALHFVNAQIDQPNMVDTLQITEVI 185 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 +++++ ++ F + + Y R +TH+++ R D+ +++ +++ Y ++ Sbjct: 186 KKIVKSVQTIFDTILDKTTADYSRFITHIRYFIIRQKNSQESLKMDKQIRELIQERYMKS 245 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + C I + YQ KIS E+++L I+IER+ + Sbjct: 246 YACGLIIKEMLERDYQWKISEDELVYLVIHIERITTK 282 >UniRef50_B6GCR8 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCR8_9ACTN Length = 307 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 93/281 (33%), Positives = 152/281 (54%), Gaps = 9/281 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + +++TK LNNNV V D+ E VV+G G+G+ +R G I +E+ SS E + Sbjct: 29 LLVKLTKTLNNNVAVAQDNNGCEFVVIGLGVGYVER-GAEIPQEKVER--VFSSVEQQSQ 85 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L +L+ IP I+ AQ L +L DSIYI+LTDH + +R Q+ +L N L Sbjct: 86 LYQLVESIPQRYFDLAREIVDYAQSTLSVRLADSIYIALTDHIAYVHERAQKGLLPKNSL 145 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLG---VQLPKDEVGFIAMHLVSAQMSG-NMEDVAG 175 W+I + Y +EF++G++ + +++ L L E IA+HL++A+ Sbjct: 146 TWEISQYYRREFEVGKKVVELLEDELDGTSALLGDAEAASIALHLINAEQEEAGSRQGIE 205 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +LM +++Q+I++Q L Y E L YQRLV H++F R+L +L + V++ Sbjct: 206 ELKLMNQVMQIIRYQAHLVYSEGDLDYQRLVVHVRFFVQRVLGGERSQ-VPGALSKMVRE 264 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +YP+A+ AE + F+ + R I EI +L I+I R+ Sbjct: 265 SYPEAYSVAEHVRAFVEGKLARSIGDEEITYLIIHIARLLN 305 >UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT65_9CLOT Length = 281 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 149/277 (53%), Gaps = 7/277 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI-EKEYALSSHELNGRL 61 I K LNNN++ + D + EK+ +GRGIGF K+ GE + + +K + + + Sbjct: 5 YVIEKALNNNILQIRDG-ETEKLFIGRGIGFGKKPGELFEKNSVVDKVFVIEDDKNQNNF 63 Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++ E + C+ +I +A+ +L ++I+ISL DH ++R + + NP L Sbjct: 64 KQIFRGDGPEFVDFCEELILLIARSFHEELHETIHISLIDHISCTLRRLKLGEQIVNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LY +EFQ+ E I++R V +P+ EVGFIA+H+ SA+ +G +++ ++ Sbjct: 124 SEIEALYDQEFQIAGEVCRRIEERYDVSMPEGEVGFIALHIHSARYNGELKNALRSNRIC 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 ++ L++ + ++S+ R + HL+++ R++ I + L + Y + Sbjct: 184 NRVITLLENEIGRRLDKKSIDCVRFMVHLRYVIERMVRQEKIEN---ELTDVIIFKYKDS 240 Query: 241 WQCAERIAIFIGLQYQRK-ISPAEIMFLAINIERVRK 276 ++ +I + + + + K IS E+ +L +++ER+RK Sbjct: 241 YELVLKIKVLLERELKTKNISREELAYLTMHVERLRK 277 >UniRef50_B9Y8N0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8N0_9FIRM Length = 281 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 152/278 (54%), Gaps = 4/278 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +ILNNN V+ D+ +E +V+G+GI F+K + I+ I K + L + ++ Sbjct: 1 MLIYRILNNNAVITKDEHNKEMIVIGKGIAFKKTMYDEIDPEQIIKVFVLKDKQDRNKVE 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ IPL+ I A+E L KL D + + L DH +++ + Q+N+ PN +L Sbjct: 61 ALLADIPLDYFEIAKEIKVAAEECLACKLDDGVIVRLADHIHYSVIKSQKNISTPNLMLN 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I++ YPKE+ +G +A+ ++++R L ++E GF+ H+VS++ D + ++++ Sbjct: 121 EIRQFYPKEYDIGRQAIQLVNQRFQSNLDENEAGFVTFHIVSSESQEGPVDFHEMLEVLK 180 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD---ESLQQAVKQNYP 238 ++ I+ F L+ + Y RLVTHLKF R+L + +SL + + YP Sbjct: 181 MIITTIEDYFQLHLDTTTFDYSRLVTHLKFFIQRMLLQGRQTNQSLQGDSLYEMLVAQYP 240 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q Q + + L Y +++ ++ M+L I++ R+ K Sbjct: 241 QINQFLNHMNARLLLDYNYELTDSDRMYLIIHLARLLK 278 >UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLN3_CLOCL Length = 280 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 149/276 (53%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERI-NSSGIEKEYALSSHELNGR 60 + K NNNV++ D D+ +E V++GRGIGF G+ + IE+ Y + E + Sbjct: 4 FTVIKPFNNNVILGFDRDKDKECVMVGRGIGFSVVKGQEFYDREKIERIYYIEDDENKAK 63 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ L ++ ++ + IS + L I+I+L DH F I+R + + + NP Sbjct: 64 LNSLYRNVDSSLIGATEEAISYISKVTESDLGKIIHITLLDHLAFTIERIKNGIKIGNPF 123 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L++ + LY KEF + E+ L II+ R+ ++LPK EVGFIAMH+ +A + VA + Sbjct: 124 LYETKVLYEKEFSIAEDVLEIINDRMNLELPKAEVGFIAMHIHAALNNQKSSSVATNAYI 183 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 ++EM+ +I+ ++ ES+SY RL+THL+F RI + I + L ++K Sbjct: 184 IQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENI---LLDSIKTQLKD 240 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++ A +A ++ + + EI ++A++I ++ Sbjct: 241 SYMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIK 276 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 44/98 (44%) Query: 72 VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEF 131 ++ +I L + Y+ L H +FAI R + + + N LL I+ + Sbjct: 183 IIQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENILLDSIKTQLKDSY 242 Query: 132 QLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 + + + + +P++E+G+IA+H+ + ++ Sbjct: 243 MVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIKLRQK 280 >UniRef50_C9LB93 Putative SacPA operon antiterminator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB93_RUMHA Length = 272 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 143/275 (52%), Gaps = 4/275 (1%) Query: 2 NMQITKILNNNVVVVI-DDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 I KILNNN ++ + E++++G+GIGF ++AG+ Y E Sbjct: 1 MYCILKILNNNALLAKVKEDDSERILLGKGIGFGRKAGDEFTEIPGASVYTPVVREERNS 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 +++ I + +II A++ ++ I + L DH FA KR Q+ + L NP + Sbjct: 61 TMNVVNTIDPVYIEAAGKIIEAAEQVFDTIKRDILLPLADHIAFAAKREQEKIFLSNPFV 120 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+ KE+ + ++ II+K G ++ DE GFIA+H+ S + D TQ++ Sbjct: 121 PDIKILFGKEYAVALKSREIIEKMTGYRISDDEAGFIALHIHSGLSDEQVSDTLKTTQII 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 + + +I+ +++S +Y RL++HL ++ R ++ + L ++ YP+A Sbjct: 181 DDCILMIEECLGDKIRQDSCAYIRLMSHLYYMVVRAKTGEAV---NIELNDFIRCKYPKA 237 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 Q +E I +I + ++K+ E+ FLAI+I+R+ Sbjct: 238 GQISEVICHYIEKKLEKKLDKEEVGFLAIHIQRIM 272 >UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2Y2_ERYRH Length = 282 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 7/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M ITKI NNN V + VV G GIGFQ + G+ I++S IEK + + S + Sbjct: 1 MHITKIFNNNCV-ATFIDGEDMVVTGSGIGFQHKIGDEIDASRIEKMFKVVS-DSQDDFE 58 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL+ IP++ I+ A L L D+I ++LTDH +A+ R + +V LP Sbjct: 59 QLLNKIPVDYFEATRAIVEYAHSVLDTSLSDTINVALTDHIYYAVLRSKDDVELPGLFTE 118 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ YP EF++G AL I+KR V LP+DE+G++ +H+V+A ++ Sbjct: 119 EIKMYYPDEFKVGAWALNYINKRFEVTLPQDEIGYLVIHIVNASNGNISHQAQNTMMFLK 178 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE----SLQQAVKQNY 237 +++ +++ + + +Y RL THLK+L+ RI+ + S N + L + Sbjct: 179 DVMAIVQSELGIEMNSSQPAYTRLATHLKYLAQRIIGNQSSNHPFDESIGELNLFIAAKL 238 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + C +I ++ ++ ++S E M+LAI++ ++ K Sbjct: 239 KKYNDCVAKINQYVHTRFDYELSMDERMYLAIHLYQIMK 277 >UniRef50_C2HEQ1 BglG family transcriptional antiterminator n=35 Tax=Enterococcus RepID=C2HEQ1_ENTFC Length = 310 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 7/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I KI N N V+V DD +EKV +G+GIGF ++ + I IE+ + + +L Sbjct: 21 MKIKKIFNQNAVLV-DDGGQEKVAIGKGIGFDRKRNDLIFDRDIERIFVMEPEGQI-KLQ 78 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ I + + II A+ L + L + + I+LTDH F+ + +++ N LL Sbjct: 79 NLLNQIDERFLFAAETIIDHAETVLMEKLNEHVLIALTDHIAFSAENINNGIVIRNKLLR 138 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 +I+ LY EF + + A+ + K LG+ DE G+IA+H+ S + N ++ Sbjct: 139 EIEVLYSDEFSIAQWAVEYLTKELGIPYTYDEAGYIAIHIHSGRSGRNNNHRSIREVTIV 198 Query: 181 REMLQLIKFQFSLNYQEE--SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 +++ L++ + + E SL+Y RLV HL+ L R D + + VK+ YP Sbjct: 199 SDIIHLVESELETDIHSEPFSLNYSRLVNHLRLLLQRTHAQQYAV-LDTEIVEMVKRKYP 257 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++++ +++I + + +YQ I+ E+ +LAI+IER+R Sbjct: 258 ESYKISKKIRVLLTKEYQLAITKEELGYLAIHIERLRS 295 Score = 41.0 bits (95), Expect = 0.040, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Query: 95 YISLTDHCQFAIKR--FQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKD 152 Y L +H + ++R QQ +L ++ ++R YP+ +++ ++ ++ K + + K+ Sbjct: 222 YSRLVNHLRLLLQRTHAQQYAVLDTEIVEMVKRKYPESYKISKKIRVLLTKEYQLAITKE 281 Query: 153 EVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 E+G++A+H+ + + +V + Sbjct: 282 ELGYLAIHIERLRSAIVQTNVNNHKEEKN 310 >UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphylococcus RepID=GLCT_STACT Length = 287 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 145/280 (51%), Gaps = 4/280 (1%) Query: 2 NMQITKILNNNVVVVIDDQ-QREKVVMGRGIGFQKRAGERINSS-GIEKEYALSSHELNG 59 N I K LNNNV++ D+ E V++G+GIGF K+ G ++ S I+K Y L + Sbjct: 3 NYVIEKTLNNNVIICTDENQHHEVVLIGKGIGFNKKKGMELSDSVMIDKVYKLEQKKDQD 62 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNP 118 L+ V+ T + + + D + ++LTDH FA KR +Q+ + NP Sbjct: 63 HYKALVEIADDNVLQTIIEAMDIITHADRTVVDKDLMVALTDHILFAYKRIKQHQFIKNP 122 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L + ++LY + +Q+ + ++K L ++ P+DE+GFIA+H+ S++ ++ +V + Sbjct: 123 FLIETKQLYSESYQIAVSVIEHLNKLLDIEFPEDEIGFIALHIASSKDDLSLHEVRLTNE 182 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ + + +++ S+ YQR + H++FL R+ + I ++ +K +YP Sbjct: 183 IINKSILIMEHDLKYKIDTNSIQYQRFIRHIQFLIRRLQKGEIIQ-VNDEFGNMLKAHYP 241 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + A +I + ++ AE+++L ++I +++ Sbjct: 242 LCYNIAVKIIKMMQQHLDVEVYEAELIYLTLHINHFTQQN 281 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 71 EVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYP 128 E++ I+ + Y H QF I+R Q+ ++ + ++ YP Sbjct: 182 EIINKSILIMEHDLKYKIDTNSIQYQRFIRHIQFLIRRLQKGEIIQVNDEFGNMLKAHYP 241 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 + + + + ++ + L V++ + E+ ++ +H+ Sbjct: 242 LCYNIAVKIIKMMQQHLDVEVYEAELIYLTLHINHFTQQNEKN 284 >UniRef50_C3RKG1 Transcriptional antiterminator n=5 Tax=Bacteria RepID=C3RKG1_9MOLU Length = 276 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 149/276 (53%), Gaps = 5/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGER-INSSGIEKEYALSSHELNGR 60 +I K+LNNN ++ D +E + +G+GIGF K+ + I G++K + + Sbjct: 1 MYRIEKVLNNNSILASKDN-QEVIFLGKGIGFGKKINDIYIPGDGVKKYKMETKEQEKRL 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 E++ ++ + II AQE+ + I + L DH FAIKR Q+NV + NP Sbjct: 60 PHEIIRNVDPVFIEIASDIIRFAQEQFDHVDTKILLPLADHIDFAIKRIQENVNMSNPFT 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI+ L+P+E+++ + +I+ G ++ +DEVG+I +H+ SA + ++ + +++ Sbjct: 120 KDIELLFPEEYKVALKGKQLINSITGFEITEDEVGYITLHVHSAISTDHVGESMQAMEII 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E + ++ + ++ S+SY RL+ H+K+L R+ + + ++ +P A Sbjct: 180 HESIDKLRKELNIGIDRNSISYIRLMNHIKYLLLRLNTEEKLQ---MDISDFTQERFPFA 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ ++ I I + +++I +EI +LA+++ER+ Sbjct: 237 YERSKEICIRLSKVMKKEIPQSEIGYLALHLERILS 272 >UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria RepID=C3RIJ4_9MOLU Length = 281 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 158/276 (57%), Gaps = 5/276 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + ++I K+ NNN V I D+ + ++ G GIGFQKR G+ ++ S IEK Y + R Sbjct: 4 ITLKILKVFNNNSVAAISDELGDIILTGSGIGFQKRIGDEVDESRIEKTYFFKD-DQQKR 62 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 + + +P ++I++ A + L I+++++DH FA+KR ++ + LPN + Sbjct: 63 FEQSIETVPAIYFEITNKIVNQANKELDTDFSGEIFLAISDHISFAVKRKKEEIYLPNVV 122 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L + + LY KE+++G AL I+++ G++L DE G+IA+HLV+ + + + L Sbjct: 123 LSETKVLYKKEYKVGLWALDYIEEKTGIRLDDDEAGYIALHLVNFSLDNKANNATKIVTL 182 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA--SINDSDESLQQAVKQNY 237 +E+L +IK ++ +E+SL Y R+ THLK+L+ RI + D+ +++ +K++ Sbjct: 183 TKEVLNVIKLSMKVDLEEDSLGYARISTHLKYLAERIFRDEIDELQDTTADIREMLKEDL 242 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 + C RI I +Y ++SP E +L I+I++ Sbjct: 243 RLSL-CINRIVKLIRDRYDYELSPDEQTYLCIHIKK 277 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 40/123 (32%), Gaps = 5/123 (4%) Query: 158 AMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEES--LSYQRLVTHLKFLSWR 215 Q + + V + E+ I Q + + + + H+ F R Sbjct: 52 TYFFKDDQQKRFEQSIETVPAIYFEITNKIVNQANKELDTDFSGEIFLAISDHISFAVKR 111 Query: 216 ILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 E + + + K Y + ++ +I + ++ E ++A+++ Sbjct: 112 KKEEIYLPN---VVLSETKVLYKKEYKVGLWALDYIEEKTGIRLDDDEAGYIALHLVNFS 168 Query: 276 KEH 278 ++ Sbjct: 169 LDN 171 >UniRef50_C2E1U8 Transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2E1U8_9LACO Length = 292 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 147/284 (51%), Gaps = 9/284 (3%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M ++ ++LNNNV + + + V+MG+G+ FQK+ G+ I +S ++K + L + Sbjct: 1 MTFRLVQVLNNNVGLACKEDDSQVVIMGKGLTFQKKKGDIIKASAVQKVFKLHEESPSD- 59 Query: 61 LSELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+ IPL+ + +I A ++ ++ IY SLT H + KR L+ Sbjct: 60 LTSLLATIPLDFLTVSYSLIDEAQEKYDYSVEPYIYASLTTHLYESAKRLADGRLVET-Y 118 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ- 178 L D+++ YP +++ L RL ++ PK E +A+H ++A+ + ++ A + Sbjct: 119 LPDLEKDYPLPYEIAGYVLDGFATRLNIKFPKQEQKSVALHFLNARTDIHTQNQAQRRKV 178 Query: 179 -LMREMLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +++L +++ + + ++ + Y+RL+ HLK+ RI + + ++ Q V Sbjct: 179 DKNKQILAIVENELNNHQIYRNRDNANDYERLLVHLKYFINRINQKPAPQVLSAAIFQEV 238 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++YP+ + ++I I + + + E ++L I+I R+ ++ Sbjct: 239 VKDYPRTFAIVQKINDQIKQKMGLEFTNDEQVYLTIHIPRLIRK 282 >UniRef50_C7TEP6 Beta-glucoside operon antiterminator n=8 Tax=Lactobacillus RepID=C7TEP6_LACRG Length = 290 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 9/282 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN VVV D+ R+ +V+ RGIGF + G+++ K Y H Sbjct: 1 MIIDAILNNNAVVVRRDK-RDIIVVERGIGFHAKKGDQLTLQDSMKVYVPEDHAKLKIAM 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 ++ +P E + RII A+ +L K + I L DH FA+ R + ++L N LLW Sbjct: 60 ATIASLPDEYLTIAARIIQEAEVQLHTKFNSYLLIELADHIHFAVTRLHEQLILHNKLLW 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLM 180 +IQ Y F++GE ALT I ++G QLP+DE GFIA+ VS + + TQ++ Sbjct: 120 EIQIAYEPAFRMGEWALTEIANQIGEQLPEDEAGFIALKFVSNDLSQQHPVNSVAFTQML 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES------LQQAVK 234 + ++I +Q LN ++ YQRLV HLKF R+ ++ L ++ Sbjct: 180 ANITKIIFYQLGLNMNAKTPEYQRLVIHLKFFLQRVYATSTAKTPVSPEPYDQALLAHLQ 239 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 Q+Y QA++C E + F+ + IS E ++L ++I R+ K Sbjct: 240 QDYTQAYRCMEDVVKFMQQKLPGPISKNEQIYLTLHIARLAK 281 >UniRef50_D1YA29 PRD domain protein n=3 Tax=Propionibacterium acnes RepID=D1YA29_PROAC Length = 303 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 139/278 (50%), Gaps = 3/278 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ + KI NNNV++ ++ E VV RGI + + GE +++S + Y + Sbjct: 21 HVIVKKIYNNNVLLGVNGSGTEMVVNARGIAYGRHRGEIVDASS-AQRYVAEGAYRTTAI 79 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL++ + I+ LA+E L + + + DH A+ R +Q ++ PL Sbjct: 80 ASLLTNATHTEVRVAQAIVELAREELGTPHARRMMLPILDHLVAAVHRAKQGAVIDFPLE 139 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 W++++LYP E +LG A+ I+D LG+ L +E ++H ++ + ++ +TQ Sbjct: 140 WEVRQLYPDEAELGRRAVEIVDGALGIHLQPEEWVAFSLHFINQRWDSRDVSRTMSMTQT 199 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ ++ + + S+S R VTHL++L R ++ ++ D + + YP+ Sbjct: 200 ICDVFTELEDLWHVEIDRSSMSASRFVTHLRYLFARASDNKQLSHVDLDIVGLMSDRYPE 259 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 A A ++A + ++ AEI ++A++ R+ E Sbjct: 260 ATLAASQVAEHMSKVIGNDLTKAEINYIALHTTRLYNE 297 >UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lactobacillus RepID=LACT_LACCA Length = 292 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 90/281 (32%), Positives = 146/281 (51%), Gaps = 6/281 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I +I NNNV +V D + + VV GRGI FQKR G+ I + IEK + L++ L Sbjct: 1 MPKIAQIFNNNVALVDLDNRGQAVVRGRGIAFQKRRGDVIPTKQIEKIFYLANETSRQNL 60 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +IP++V+ T II +AQ++ K+ D IYI+L+DH A KR+Q ++ Sbjct: 61 YFLLKNIPIDVVTTTYEIIDVAQKQYRLKVLDYIYITLSDHIYEAYKRYQAGTY-QETMV 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA--GVTQ 178 D YP E+ + ++AL II LGVQ P+ E+ +A+H ++A + E V Sbjct: 120 PDFHIQYPAEYAVAKQALQIIATNLGVQFPQSEIKNLALHFINASGEDDGEQVFGKSNEA 179 Query: 179 LMREMLQLIKFQFSLNYQE-ESLSYQRLVTHLKFLSWRILE-HASINDSDESLQQAVKQN 236 + +++Q + + + Y R + HL++L R+ + +KQN Sbjct: 180 SLSQLVQEVLKRHHITRSHSNGNYYDRFMIHLQYLIDRLQRVDTYAVTIVPEVATELKQN 239 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YPQ+++ A I I Q R +S E ++ I+I+R+ E Sbjct: 240 YPQSYKIASEIFDEIKDQLYRSMSEDERLYFIIHIQRLINE 280 >UniRef50_D1AMX4 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMX4_SEBTE Length = 282 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 89/275 (32%), Positives = 151/275 (54%), Gaps = 3/275 (1%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I KILNN++V+V D EK++MG+G+GF GE+++ IEK ++L L Sbjct: 2 IKKILNNSLVLVNDGD-EEKIIMGKGVGFSSHIGEKVDIKKIEKIFSLEKKNTLQNYERL 60 Query: 65 LSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 IP I+ A + +++SLTDH ++++R + ++L N L+WDI Sbjct: 61 AMEIPEIYFEIAGEIVERANKEFTGIFNAQLFLSLTDHISYSVERVNKGIVLQNRLIWDI 120 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLMRE 182 + Y KEF +G ALT+I +++G+QLP++E IA +LV+AQ S M + +++E Sbjct: 121 KAFYSKEFTVGLWALTLIKEKIGIQLPEEEASNIAFYLVNAQSSALKMGETILSITMLKE 180 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 +L +I++ + ++ L Y RLVTH++F R+LE + + + L + YP + Sbjct: 181 ILNIIQYHTNHLLNKDDLHYLRLVTHIQFFVQRVLEGKMLKNREIFLLNQYVRLYPSETK 240 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 C E+I ++ + IS E +L I+I R +E Sbjct: 241 CLEKINQYVKNCVGKDISVDEKFYLLIHIIRNVQE 275 >UniRef50_B9Y4R0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4R0_9FIRM Length = 275 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 155/278 (55%), Gaps = 7/278 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I +I NNNV++ ++ E +++GRGI F G ++ IEK++ L ++ + Sbjct: 1 MIIKQIYNNNVILSENEAGDEIILVGRGIAFGMTRGSKVVEGRIEKKFELQD-DVGQKFK 59 Query: 63 ELLSHIPLEVMATCDRIISLAQER-LGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ +P + + + II + + ++ DSIY++LTDH I+R + ++ LL Sbjct: 60 TLVQDVPYKTILVSEEIIDYIKTQSTKRINDSIYVTLTDHIANMIERIKMGIVFDPTLLL 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ LY +E++LG + ++ ++L + + E FIA+H+++A++ NM+ + +T ++ Sbjct: 120 NVKSLYKEEYRLGLKVTELLRQKLKIDIDDGEASFIALHIINAELDSNMQQMYEITAVIE 179 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN---DSDESLQQAVKQNYP 238 E+L L++ F + E+ R +TH +F + R++ + ++ D + S Q +Q +P Sbjct: 180 EILNLVREDFQI--DTENGQCDRFITHCRFFAQRVVNNEYLSTKFDYNLSTYQVFEQTHP 237 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + C ERIA I +Y +S E +++ I++ R+ + Sbjct: 238 RETACIERIAQRIKDRYGYTVSTDEKLYIMIHLIRLTE 275 >UniRef50_B6FTX2 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX2_9CLOT Length = 281 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 150/279 (53%), Gaps = 11/279 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQ+ LNNN + ID + +E + +G+GIGF K E + + I + + +++ + Sbjct: 1 MQVINKLNNNFAICIDGEGKELIAVGKGIGFPKTPYEVEDLNLITRTFY----DIDPKYI 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL IP +V+ +++ +A+ L ++ ++ ++++DH F+I+R Q+N+ + PL++ Sbjct: 57 ELFKDIPEKVVHFTAKLVEIAKNELGYEMNPNLVVTMSDHIHFSIQRAQKNIDVQMPLIY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV------AG 175 ++++ +P E ++G+ A+ I++R V+L +E IAM+ V+A+ ++ Sbjct: 117 EVEQTFPAEARIGKYAVKQIERRFNVRLDPNEASGIAMNFVNARYDTRLKTDVADQLKKQ 176 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +++ + + +++ + + +S ++ R +HL +L RI + + + + Q++K Sbjct: 177 YQEILEDTISIVEDEIGIVIDRDSFNFARYSSHLMYLLDRIAGNKMLYSDNGIMYQSMKD 236 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +P C E + + + +S E ++L ++I R+ Sbjct: 237 EFPGIAVCVELLERYFKRKCGIILSKEEKLYLILHINRI 275 >UniRef50_C2BFD9 BglG family transcriptional antiterminator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFD9_9FIRM Length = 280 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 92/279 (32%), Positives = 166/279 (59%), Gaps = 6/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M + K++NNNV+ VI + EK++MGRGIGF+K+ G+ + + IEK + + + + Sbjct: 1 MIVGKVINNNVISVI-ENNVEKIIMGRGIGFKKKKGDIVEENKIEKIFIIENEFNAIKFK 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 EL+++IP++ M D II A++ L + D +YI+L DH AI R ++ + + N L+ Sbjct: 60 ELMANIPMDCMLIADDIIIHAKKILKRKFSDLLYINLADHIDAAINRVEEGITIKNLLII 119 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-SGNMEDVAGVTQLM 180 D++R YP+EF+LG+ L II+ + GV LP+DE GFIA+H+V+A+ + +V + +++ Sbjct: 120 DVKRFYPEEFELGKYGLNIINNKFGVSLPEDEAGFIALHIVNAEEKYEDKNEVIKMFEII 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI---NDSDESLQQAVKQNY 237 + +++ ++++ + E ++ Y R +THLKF + R+L + D L V + Y Sbjct: 180 HLIEDIVRNEYNVIFDESNVYYFRFLTHLKFFAERLLSKGKYNSEKNLDYDLFDTVIKKY 239 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +A +C I + Y IS E M+L ++++R+ Sbjct: 240 KEANRCVGVIKNVLNDMYGYDISVEEEMYLTLHVQRLIS 278 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 7/131 (5%) Query: 150 PKDEVGFIAMHLVSAQMSGNMEDV--AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 K E FI + +A + + +++ K + + L Y L Sbjct: 41 NKIEKIFIIENEFNAIKFKELMANIPMDCMLIADDIIIHAKKILKRKFSD--LLYINLAD 98 Query: 208 HLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFL 267 H+ R+ E +I + L VK+ YP+ ++ + I ++ + E F+ Sbjct: 99 HIDAAINRVEEGITIKNL---LIIDVKRFYPEEFELGKYGLNIINNKFGVSLPEDEAGFI 155 Query: 268 AINIERVRKEH 278 A++I +++ Sbjct: 156 ALHIVNAEEKY 166 >UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-binding protein n=12 Tax=Enterococcus RepID=C9BK18_ENTFC Length = 291 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 151/276 (54%), Gaps = 4/276 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 + + + K LN+N V+ IDD EK+ MG+GIGF + + + +K + L S E R Sbjct: 17 LTVYVMKKLNHNAVL-IDDDGIEKIAMGKGIGFSAKVSKPFDVEDADKLFVLDSKEKIKR 75 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 SE++S IP+E M + +I L R+ L +IYI+LTDH FAI+R +++ + + Sbjct: 76 FSEIVSQIPIEFMDFAEEVIELITARISSPLDSNIYITLTDHIYFAIQRKREDRDVTAIM 135 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQ 178 L +++ LYP E+ + E + I+ R +L +EVGFI MH+++A++ + + Sbjct: 136 LPEMRFLYPNEYDIAVEVVERINHRYQTELGSNEVGFITMHIINAELGEPNSLKSLKIVE 195 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + +L ++ +S Y +ESL+Y RL+ H+KFL R++ + + Sbjct: 196 MTTTILSHLEKSYSNVYDKESLTYHRLMVHIKFLVKRLIYQEETPVENIGFFTETF-KHS 254 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+ A +I I Q+Q I EI++LAI++ R+ Sbjct: 255 KAYCTALKIKDIIEQQFQLAIQENEIIYLAIHLARI 290 >UniRef50_B9WWD1 Transcriptional antiterminator, BglG n=2 Tax=Streptococcus RepID=B9WWD1_STRSU Length = 245 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 138/219 (63%), Gaps = 2/219 (0%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 MQI K+ NNNV+ ID Q RE +VMG+G+GFQK+AGE +++S IEK + L + LS Sbjct: 1 MQIEKVYNNNVIQAIDQQGRELIVMGKGLGFQKKAGEELDTSKIEKTFVLQNDYQQSDLS 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L + + + II+ A+E L D S+Y++L DH F +R ++ + + NPL W Sbjct: 61 SLYLQMESGEVEVVNAIINRAEETLEVQFDLSLYLALADHLHFVFQRCREGIFIENPLSW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLM 180 ++++ YPKE+Q+G EAL ++ +RLG++L K E IA+HLV+AQ +G ++ +++++ Sbjct: 121 EVRKFYPKEYQIGLEALQLVQERLGLELGKGEASSIALHLVNAQKNGAFGKETQTISKIV 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEH 219 ++L +++ F EE SY R VTH+++ + R+ Sbjct: 181 TQILDIVRLHFGSVTYEEDTSYHRFVTHIQYFAQRVANG 219 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 178 QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNY 237 +++ ++ + + + + Y L HL F+ R E I + L V++ Y Sbjct: 72 EVVNAIINRAEETLEVQF--DLSLYLALADHLHFVFQRCREGIFIEN---PLSWEVRKFY 126 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+ +Q + + ++ E +A+++ +K Sbjct: 127 PKEYQIGLEALQLVQERLGLELGKGEASSIALHLVNAQK 165 >UniRef50_C2DZ21 BglG family transcriptional antiterminator n=8 Tax=Lactobacillus jensenii RepID=C2DZ21_9LACO Length = 277 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 150/279 (53%), Gaps = 8/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V D+ E +V+G+GIGF K+AG+ I S IE+ + + + Sbjct: 1 MIFEKSYNNSAALVKDEAGVEWIVIGKGIGFGKKAGDIIEESKIERRFKNTDQDTT---L 57 Query: 63 ELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNP-LL 120 + ++ + ++ ++++ L+Q ++ K + Y SL DH F + R ++N++L N + Sbjct: 58 KTVTSLSSLALSLTNKMVELSQIKIGIKFDNYAYTSLADHVDFMLTRNKENMILDNQMMQ 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQL 179 W++ +LYPKE + E + +++K V LP+ EV F+ HLV+ +++ +++L Sbjct: 118 WEVVKLYPKEVAVARELVAMVEKEAKVTLPESEVVFLTYHLVNVGFDKETVQETMELSKL 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS--DESLQQAVKQNY 237 + +L+++ + + S +Y R VTHL+ L +I++ + D Q +KQ Y Sbjct: 178 LDGILRIVSLETGKSLDRTSFNYSRFVTHLRALLIQIIKKQDRKNDGLDPVFGQLMKQKY 237 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 P+ + E+IA FI + ++ + ++L +++ RV Sbjct: 238 PETSKVVEKIAYFIKEKTGYQLGEDDEVYLILHVWRVSN 276 >UniRef50_B3WDA1 BglG family transcriptional antiterminator n=4 Tax=Lactobacillus casei group RepID=B3WDA1_LACCB Length = 276 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 151/276 (54%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K+LN NVV+ D E + G+GIG++++ + + I K++ + Sbjct: 1 MFRIKKVLNVNVVLAEQD-GHEYIAFGKGIGYRQKVNACLPDNAIFKKFMPLDDSRKSEM 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + L++IP ++ +I++ A+++L L SIY +LTDH F+++R+ L N + Sbjct: 60 IQSLNNIPPVYISITSQIVTYAEQQLQLSLLPSIYYALTDHLAFSVQRYHSKQSLGNRIY 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQL 179 W+++ YP+ F +GE LT+++ L + LP++E IA H+++A + ++ VTQL Sbjct: 120 WEMKPYYPEMFAIGEYGLTVVEATLQLALPREEAANIAFHIINATPAAAGKANILEVTQL 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +LQ ++ SL+Y+R VTH+KF + R L + D D L +V YP+ Sbjct: 180 VDNVLQAVRALTGGTIDTTSLNYERFVTHMKFFAERYLGDTMLAD-DGQLLTSVYTVYPE 238 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 A + A ++ I Y+++ + E+ +L I+I RV Sbjct: 239 AAKIALKVQKAIIAIYEKEPTKEELAYLIIHIHRVL 274 >UniRef50_B7CDV3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV3_9FIRM Length = 277 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 146/276 (52%), Gaps = 5/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALS-SHELNGR 60 +I KILN+N ++V+ + E +VM +GIGF K+ GE + K+Y + S++ + Sbjct: 1 MCEILKILNHNTILVLKEN-EEIIVMSKGIGFGKKQGENVEIPRNAKQYKMQKSYQAKQK 59 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + + +I + II+L +E+ GK++ I +SL DH FA+KR ++ NP Sbjct: 60 SNNIFDYIDPMYIEISSEIITLTKEKFGKVEHDILLSLADHIYFAVKRIKEKDFPSNPFN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DIQ ++P E+ + +A +I+K ++ +E+ FI +H+ SA + D V +++ Sbjct: 120 MDIQLMFPDEYSVALKAKDVIEKYTHEEINAEEIAFITLHIHSAISVNKVGDSMEVMRVI 179 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 RE ++ ++ SLSY RL+ H+KFL R+ + + + K+ +P A Sbjct: 180 REFFMKLQADLNIRIDANSLSYIRLMNHIKFLLLRLNNDEELQ---MDITEFTKEKFPFA 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 ++ A + + + + +E+ +LA+++ER+ Sbjct: 237 YEQARVLCEQLSHVLHKDLPDSELGYLALHLERILS 272 >UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y980_9FIRM Length = 274 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 139/278 (50%), Gaps = 6/278 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M M+I + +NNN + + VV GRGIGF + S +EK Y+ + Sbjct: 1 MKMKIIRKINNNYALARKEDGEVVVVAGRGIGFGAIPRYVTDKSQVEKIYSGVDRNTIEQ 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 + +P ++ ++I++ A++ L K + +L DH +F I+R QN++ Sbjct: 61 M----GEMPENILKLSEQIVAYAKKHLTKKFSKNFVFTLADHIEFTIERVGQNMIFDFKG 116 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQ 178 D + LYP+E ++ A+ I++ L ++LP E+G M++V++++ ++ + Sbjct: 117 YTDFKYLYPREVEISNYAMKKIEEELHIKLPPSELGGFVMNIVNSEVKPAGNDEDVNFSP 176 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L+ ++ +I+ F L +S +Y R TH+ +L R+ E D + + + + YP Sbjct: 177 LISQITAIIEKHFKLEINRDSFNYSRFATHMIYLLRRLKEGQKTTDDNRRIYAKLLEEYP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +QC + IA F+ Q K+ E+++L +++ R+ Sbjct: 237 DTYQCVDEIARFLEENIQSKLDENEMLYLILHVNRLCS 274 >UniRef50_B4U1G3 Transcription antiterminator LacT n=12 Tax=Streptococcus RepID=B4U1G3_STREM Length = 283 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 8/279 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ + LNNN +V + + VVMG GI FQK+ G+ I +EK + L + E L Sbjct: 8 MFRLIRPLNNNAALVKNAANEQAVVMGAGIAFQKKKGDLIREEAVEKTFLLKNDEARENL 67 Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +PL+V+ +I L +Q +Y++LTDH A Q+ N L Sbjct: 68 LLLLKDVPLDVITVTYDVIDWLVLTYHYPVQQYLYVTLTDHIYAAYHMLQKGTYSVNRL- 126 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI + + +E+++ + AL + +RL P DEV IA+H ++A+ + + Sbjct: 127 PDISKEFGQEYEMAQAALEMFRQRLRTTFPDDEVTKIALHFINAKGEESSPQREHSS--T 184 Query: 181 REMLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 +++L ++ S Y RL+ HL + + + SL+Q +K+ Sbjct: 185 KKLLNQVEAALMANGITRTSTNSHFYDRLMIHLTYFIQSLDRKNQGYHAMGSLEQQIKKE 244 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 YP+A++ I + +++ +E +++ I+I+R+ Sbjct: 245 YPKAYEIGNAIYQLMTDLTGQELVESEKIYIVIHIQRLL 283 >UniRef50_Q041B0 Transcriptional antiterminator n=18 Tax=Lactobacillus RepID=Q041B0_LACGA Length = 292 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 152/279 (54%), Gaps = 8/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH+ Sbjct: 13 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFTATSHQDEVNQ- 71 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL- 120 + I + +++I + + L K D Y++L DH FA+ R + ++ + Sbjct: 72 --VKEINASTIDLTNKVIQMVEPLLNVKFNDFQYLALADHIDFALSRTEDHIDMSAANTR 129 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQL 179 W+++ L+PKE+++ E + +I+K + V LP E F+ H V+A + ++ +T+L Sbjct: 130 WEVKNLFPKEYKISERVIALINKEMKVNLPPSESIFMTYHFVNAASDNDQVQETVEITEL 189 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNY 237 + ++ +I++Q+ + ES +Y R +THL+ L R+L + + D+SL +K Y Sbjct: 190 ISGIIDIIQYQYQMTLDTESFNYSRFITHLRVLLVRLLRNKHQKSGELDDSLLAFMKIKY 249 Query: 238 PQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 A+ AERIA ++ + ++ + +L ++I RV Sbjct: 250 NHAYDTAERIATYLHSKKGWTLNSDDKFYLVLHIWRVTN 288 Score = 53.4 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 60/139 (43%), Gaps = 16/139 (11%) Query: 140 IIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEES 199 I++R +DEV + E A L +++Q+++ ++ + + Sbjct: 55 KIERRFTATSHQDEV------------NQVKEINASTIDLTNKVIQMVEPLLNVKFND-- 100 Query: 200 LSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKI 259 Y L H+ F R +H ++ ++ + VK +P+ ++ +ER+ I + + + Sbjct: 101 FQYLALADHIDFALSRTEDHIDMSAANT--RWEVKNLFPKEYKISERVIALINKEMKVNL 158 Query: 260 SPAEIMFLAINIERVRKEH 278 P+E +F+ + ++ Sbjct: 159 PPSESIFMTYHFVNAASDN 177 >UniRef50_A8RAU5 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAU5_9FIRM Length = 273 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 144/276 (52%), Gaps = 6/276 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K L NN + D+ RE + +G GIGF K + S I++ + E Sbjct: 1 MEVIKKLGNNAAICKDNSGRELIAIGLGIGFPKCPYILEDLSKIDRTFYNVDKE----YL 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +I E+ + +I LA L L+ + +L DH FAI+R + ++ P+ Sbjct: 57 NLFEYIDSEIFSIAADVIDLATTMLSVPLKHNAQYTLADHLNFAIERMDKGMIFSTPISN 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGV-TQLM 180 +++ LYP E ++ + L ++ KR + LP++E+ IAM++++++ + + + ++ + Sbjct: 117 ELRDLYPVEVKIAKYTLGLMKKRRNIDLPEEEMYAIAMNIINSEENITVSGNVKLKSEFI 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 RE++ +I+ Q +++ S +Y R +H+++L R E I+ +++ L + +K Y + Sbjct: 177 REVVHVIEAQMNVSIDMHSFNYSRFASHMQYLFRRKNECTEISSANKKLFEVLKNEYTET 236 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +QC I I ++ I EI++L +++ R+ Sbjct: 237 YQCVLLIKKLIFDKFNWNIGDEEILYLILHVNRLCS 272 >UniRef50_C6VMH3 Transcription antiterminator n=4 Tax=Lactobacillaceae RepID=C6VMH3_LACPJ Length = 280 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 146/279 (52%), Gaps = 8/279 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVVV +D E V G+G+GFQK E + + + + +++ Sbjct: 1 MRVVKKINNNVVVCLDQHGEELVAFGKGLGFQKVPYELTDMTKVTMTFYKLNYQ----YY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL IP E+ I+ AQ + + L ++ SL DH FAI R P + Sbjct: 57 QLLKEIPTEIFDLSAAIVERAQALIPRILNPNMIFSLADHINFAITRLTHYKSAQLPFSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG--NMEDVAGVTQL 179 D+++LYP+E +G A+ +I++RL +QLP EV IAMH V++Q + V ++ Sbjct: 117 DVEQLYPQETDVGYYAVRLINRRLNIQLPVSEVTAIAMHFVNSQTNDLATNSSVNSDDEM 176 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASI-NDSDESLQQAVKQNYP 238 ++ + ++I+ ++ L + +Y R V HL++ R+ +H I + + L ++ + P Sbjct: 177 IKIITKIIEQEYELRINQTEFTYNRFVMHLRYYIKRMKKHEQISENDNSKLFNTMRHDEP 236 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + A+RIA ++ Q + E+ +L I ++R+ + Sbjct: 237 EIYLVAKRIADYVDSQLDTNSNDDELFYLMIYVKRIVNK 275 >UniRef50_C9B2H8 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9B2H8_ENTCA Length = 280 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 148/276 (53%), Gaps = 4/276 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K+LN NV++V D ++ + G+GIG++++ G+ I+ I K Y L Sbjct: 1 MYLIKKVLNVNVIIVEKDN-KDVIAFGKGIGYRQKKGQLISEEKISKFYLPIEDNRMESL 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ++++P++ + +I A++ L +L + SLTDH F ++R + NV++ + + Sbjct: 60 ITFMNNVPVKYIELAYEVIQEAEKYLDTELSANTLFSLTDHIYFTVERIRDNVIMTSSMY 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-DVAGVTQL 179 W+ +R YP+EFQ ++ + II+K LG+ L + E I H+++ + + +T++ Sbjct: 120 WEFKRFYPEEFQAAQKGVAIIEKALGISLNEQEAANITFHIINGNSRSAIHANAIQITKI 179 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +L+ ++ SL Y+RLVTH KF + R L + +N+ D L + V Y + Sbjct: 180 VTNILKSVQMLVKKKLDSHSLHYERLVTHAKFFAERYLTNTMLNN-DAVLIKTVSTLYQE 238 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 ++RI + Y++ I+ EI +LAI+I R+ Sbjct: 239 PMAYSQRIKRTLEEIYEKPITEEEIAYLAIHINRLL 274 >UniRef50_B9Y550 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y550_9FIRM Length = 278 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 144/273 (52%), Gaps = 7/273 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN + D + + +V GRG+GFQK E + S I + Y + E Sbjct: 1 MKLLKKINNNFALAEDSKGEQVIVEGRGVGFQKMPCELNDLSSISRTYYGFNSETI---- 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + +++ D++ + A +++ +L ++ +L DH +F I+R +N+ L PL + Sbjct: 57 RLIQTVNPQILQIADQLYNEAVDQIPAELNPNLPFTLADHLEFCIERLNKNIELKMPLTY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +++ YP E +L E AL I+++LG+ LP E IA+++++++++ + +L+ Sbjct: 117 ELESSYPLEMKLAENALERIEEQLGICLPASEKAGIALNIINSELTVKASNTQKEEELIA 176 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++I+ S +Y R TH+++L RI E S + SL Q +++ Y + Sbjct: 177 GCTRIIEAHLHQTIHLNSFNYVRFATHMRYLLRRINEGVS-ENCSYSLYQTMQKQYAKIA 235 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 +A+++ + +S E +L ++++R+ Sbjct: 236 GIVNGMAVYLEVN-GYPVSEEEKFYLILHVQRL 267 >UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH42_PEDAC Length = 283 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 153/259 (59%), Gaps = 3/259 (1%) Query: 20 QQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRI 79 + E V++GRGIGF K+ GE + I+K++ L+ + S +L+ + E + +I Sbjct: 18 DEDECVLVGRGIGFSKKPGEFVEEDRIQKKFLLADKGTMAKFSRILNEVTSEELLVTSKI 77 Query: 80 ISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEAL 138 IS+A++ L KL +SIYISLTDH + I+R+ Q L+ N LWDI+R YPKEF++ +A+ Sbjct: 78 ISMARQELKVKLSESIYISLTDHIHYVIERYHQGKLMTNTFLWDIKRYYPKEFEVALKAV 137 Query: 139 TIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 +I+K+ ++L DE G+IA H ++A G + A +T+L+ E++ ++ + Sbjct: 138 HLINKKFNIKLKDDEAGYIAFHFINATNDIGEDGNTALLTKLVHEIINIVSLNLDMVIDS 197 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVKQNYPQAWQCAERIAIFIGLQYQ 256 +S R +TH+KF S R+++ D ES L V+ Y ++++ ++I +F+ +YQ Sbjct: 198 SDISSYRFITHVKFFSQRLIKRMQSADETESDLFNLVRNKYEKSYKIVKKIDLFLNKEYQ 257 Query: 257 RKISPAEIMFLAINIERVR 275 +S + ++ ++I R+ Sbjct: 258 YSMSKNDQLYFMMHIHRLI 276 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 E + + +++ + + + + E Y L H+ ++ R + + ++ Sbjct: 64 NEVTSEELLVTSKIISMARQELKVKLSES--IYISLTDHIHYVIERYHQGKLMTNT---F 118 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +K+ YP+ ++ A + I ++ K+ E ++A + + Sbjct: 119 LWDIKRYYPKEFEVALKAVHLINKKFNIKLKDDEAGYIAFHFINATND 166 >UniRef50_B1IBZ3 Transcription antiterminator LacT n=29 Tax=Streptococcus RepID=B1IBZ3_STRPI Length = 278 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 7/280 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I +N+NV +V +D+ E +V+G+GI F K+ G+ I + +EK + + + E Sbjct: 1 MYRILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENQVEKIFRMKTEESRENF 60 Query: 62 SELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +PL+ + II ++ +Q+ +Y++LTDH + + Q + L Sbjct: 61 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRY-KDSNL 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI YP FQ+ EA I ++L P+DE+ IA H ++A+ +E V Sbjct: 120 PDISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELV-ESIDKR 178 Query: 181 REMLQLIKFQF----SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 +E+L+ ++ ++ + Y R + HL + + N S ++ +KQ+ Sbjct: 179 KEILRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQS 238 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 YP+A++ +I I + +E ++L ++I+R+ Sbjct: 239 YPKAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS 278 Score = 43.0 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 6/104 (5%) Query: 175 GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVK 234 + E++ + ++ QE Y L H+ + + + + + Sbjct: 70 DFITVTYEIIDKLSKKYHYPIQEY--LYVTLTDHIYCSYQALTQGRYKDSN----LPDIS 123 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 YP A+Q A + EI+ +A + E+ Sbjct: 124 AKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGEN 167 >UniRef50_A8RFW3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFW3_9FIRM Length = 293 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 + K++NNN+V+V D RE + +G+G+GF+K + + I K Y + N L+ Sbjct: 9 YRTFKVVNNNIVIVKDSNGREMIAIGKGLGFKKSKNDIVYPEEIMKTYIYLDRQKNLNLT 68 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L +P EV+ II A + L + ++ +SL+DH F++K+F++ Sbjct: 69 -LFEEVPFEVIEVSQHIIDYAAKTLNQKYNVNLLVSLSDHIDFSVKQFREGNNTSKLFNE 127 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y E+Q+G+ A+ I++ L V LPKDE IA HL+ A + + + + Sbjct: 128 EIKRFYEDEYQVGKCAIQYINETLHVDLPKDEATSIAFHLIVASQEKTNIETRELLEGVN 187 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES--LQQAVKQNYPQ 239 ++ + E+SL+Y R + HLKF RI+ H + N S E + + Y Sbjct: 188 SIVNITMKYLGNQIDEDSLAYSRYIIHLKFFLSRIVSHQTSNGSIEVTNIFGQLVTKYEG 247 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +C I+ FI ++ + + + ++L I+I R+ + Sbjct: 248 VDRCIHEISEFINGKFNYRCTDEDCIYLMIHIVRLYE 284 >UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ANJ9_SEBTE Length = 281 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 152/279 (54%), Gaps = 5/279 (1%) Query: 1 MNMQITKILNNNVVVVID-DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNG 59 MN +I K+ +NNVV+ D + E + +G GIGF+ +AG I+ S IEK Y S E Sbjct: 1 MNFEIIKVFSNNVVLCEDKRKNTEIIAVGCGIGFKAKAGTFISDSAIEKLYGELSEEDKK 60 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 LS+++S+ E++ + + + + L + L ++++ H FAI+R + ++ NP Sbjct: 61 YLSDIMSNTDSEILDIVEDALKIIDKELKEKLSIYFHLTMLSHLSFAIERSKYGTIIRNP 120 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 L +++ LYP+E+++ E+ + ++K L +L DEVGFI MH+ +A + + + Sbjct: 121 FLEELRVLYPQEYRIAEKFIAEVNKHLEYKLEIDEVGFITMHIHAALRGVKVSETSEQLT 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 L E++++I+ + ES + RL+THLKF R+ + I + L +K+ Sbjct: 181 LTYELVKVIENELGHKIDRESYDFIRLLTHLKFAVNRVKNNIKIENI---LLPEIKKKLK 237 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ ++++A F Y + E+ ++ I++ +++ + Sbjct: 238 LYYKISQKVAKFAEKNYNILFNEDEVGYITIHLAKIKSK 276 >UniRef50_C9XMN6 Transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=C9XMN6_CLODC Length = 271 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 94/274 (34%), Positives = 157/274 (57%), Gaps = 4/274 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ KI NNN + + + ++E +++G GIGF KR G+++N IEK Y + H + Sbjct: 1 MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDHMQT-KFL 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ELL ++ EVM +IISL GK + +SL +H FAI R + NV LPN +L D Sbjct: 60 ELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLD 119 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I+ +Y KEF+LG +AL II + + LP+DE G+IA+H V+ Q + N+ + ++ Sbjct: 120 IKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVNLQSNDNL--AYDTLKFVKG 177 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS-DESLQQAVKQNYPQAW 241 + LIK + L E SLS R THLKFL+ RI ++ D + + N+P+ Sbjct: 178 SIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNK 237 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 + E++ ++I +++ K+ E ++L +++ ++ Sbjct: 238 EYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL 271 Score = 58.0 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 43/123 (34%), Gaps = 6/123 (4%) Query: 154 VGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLS 213 + ++ H+ + + V ++++ LI + LV H+ F Sbjct: 47 IYYVQDHMQTKFLELLKNVSPEVMDASQQIISLIPGNEGKF---NNKGILSLVEHISFAI 103 Query: 214 WRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIER 273 R+ + + + + +K Y + ++ + I + E ++A++ Sbjct: 104 DRMKNNVFLPNL---MLLDIKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVN 160 Query: 274 VRK 276 ++ Sbjct: 161 LQS 163 >UniRef50_D1PP25 Putative SacPA operon antiterminator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP25_9FIRM Length = 239 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 136/247 (55%), Gaps = 12/247 (4%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K NV + D + RE +V G+GIGF E + S +++ + +++ + Sbjct: 1 MKVIK----NVALAQDAKGREMIVFGKGIGFPATPYELADLSAVQRTFY----DVDEKYF 52 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +LL +P EV D I A++ L L ++ L DH FAI+R ++ V L PL + Sbjct: 53 DLLRDVPQEVFLAADDIAENARDELNCPLNPNLTYVLADHLNFAIQRCREGVALQTPLAY 112 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLM 180 DI+ LYP+E++L AL + ++L V LP++E IA+H+++A+ G+M T+++ Sbjct: 113 DIRHLYPQEYELAHTALKALREQLQVDLPENEAISIALHIITAEAEVGDMHATMLTTKVI 172 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQQAVKQNYP 238 E+ L++ + ++S SY R H+++L R++E ++N D +++ + + + YP Sbjct: 173 SEISDLVEEHLQIRLDKDSFSYSRFAMHMRYLVQRMMEGKALNGDDGMQAMLRTMHREYP 232 Query: 239 QAWQCAE 245 + C E Sbjct: 233 DVYACVE 239 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 5/108 (4%) Query: 164 AQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN 223 + V ++ + + + + L HL F R E ++ Sbjct: 50 KYFDLLRDVPQEVFLAADDIAENARDELNCPLNPN--LTYVLADHLNFAIQRCREGVALQ 107 Query: 224 DSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 L ++ YPQ ++ A + Q Q + E + +A++I Sbjct: 108 T---PLAYDIRHLYPQEYELAHTALKALREQLQVDLPENEAISIALHI 152 >UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4223B Length = 278 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 148/276 (53%), Gaps = 2/276 (0%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I K++NNNVV+ + E +++G+GIGF ++ G+ I + I+K + L E + Sbjct: 4 TYRIEKVVNNNVVIAQSPELNEVILIGKGIGFGRKKGQHIQADAIDKLFVLKDKEEQKQY 63 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 ELLS + ++ + II + Q L L + I+++LTDH QFAI+R +Q + + NP L Sbjct: 64 RELLSDLDEALIVHINEIIRMIQRELPKPLYERIHLALTDHIQFAIRRLEQGIEISNPFL 123 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 + + ++P EF L +A+ ++ L V+LP+ E+GF+A+H+ SA + + ++ QL+ Sbjct: 124 TETEMMFPNEFHLARKAVDYLNAHLTVELPEAEIGFVALHIYSASSNQPLSEMNEHPQLI 183 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E++++I + +++ S+ Y RLV+ L L R I + L +K+ + Sbjct: 184 SELVEIIMEKGNVSLNRRSVEYMRLVSFLCELIDRFQS-TDIVNYSPKLSDVLKEEFELC 242 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + + + ++ ++ + ++R K Sbjct: 243 YTVSSELINVLNQRFNTHYKAEQLPEVVFYLQRFIK 278 >UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS0_9FIRM Length = 284 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 152/283 (53%), Gaps = 8/283 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I ILNNN V+ IDD ++E V++ GIGF + G + S +EK + L ++ + Sbjct: 1 MTIKTILNNNAVIAIDDNEKEVVIVKNGIGFNSKKGMVLKDSDMEKVFILQEKNVSDDMI 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LLS I E + +I+ + L + DSIY++L+DH + A+ R ++ + N + W Sbjct: 61 HLLSLISEEYIEVSKKIVDYGRTVLKTGVHDSIYVTLSDHIELAVSRKKKGIAFDNAMTW 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG---VTQ 178 I++ Y +E+ +GE AL II GV LP++E G IA+H V+A++ E ++ Sbjct: 121 SIKKTYREEYHIGEVALKIIQIECGVTLPEEEAGLIALHFVNAKIHNEPEVTHDFAYISV 180 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLS----WRILEHASINDSDESLQQAVK 234 +++++ IK+ E SL Y +L+++L+ L+ R S + + Q K Sbjct: 181 FVQDLINFIKYFLCTEMDENSLEYNQLLSYLQTLALVLDDRKAAEGSSDSRYHEMLQYAK 240 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 ++ +A+ C++RI F +Y +I P +I+ L + I + K+ Sbjct: 241 VSFKRAYDCSDRIRRFTKEKYDLEIQPEDILHLTMYINKFIKK 283 >UniRef50_A9QSQ9 Transcription antiterminator, BglG family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSQ9_LACLK Length = 279 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 159/280 (56%), Gaps = 6/280 (2%) Query: 3 MQITKILNNNVVVVI-DDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 M+I KILNNNVV+V D+ ++E++VM G+GF K+ G+ I ++ + LS + Sbjct: 1 MRIKKILNNNVVLVSVDNFKKEQIVMQNGLGFNKKVGDEIPEDSNQQVFVLSDSLYK-KY 59 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L ++ ++IIS A+E+ +L + I+++LTDH I RF + ++L N L Sbjct: 60 EHLTNNTDPIAAQIAEKIISYAEEKYQLQLNEMIHLTLTDHIDGVISRFSKGIVLRNELN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ-- 178 +I R+Y +E+++G A+ + + + DE FIAMH+++ ++ + + T Sbjct: 120 LEISRIYTQEYKVGLYAIDQLREVIKSSDLGDEAAFIAMHILNNRLDLDTSEEQIRTTLG 179 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + +++++++ F+ Y E SY R V HLK L+ R+ ++ + DE L +A+ YP Sbjct: 180 FISDIIKVVETYFNKKYDETLFSYYRFVMHLKGLAKRM-YAKNLFEEDEILYKALVAAYP 238 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 + +CAE++A I L+Y IS E FL + IE++ +E+ Sbjct: 239 EPARCAEKVAKMIFLKYSLNISSEEKAFLTLYIEKLNREY 278 >UniRef50_D0R2Y6 Antiterminator protein n=7 Tax=Lactobacillus RepID=D0R2Y6_LACJF Length = 279 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 142/281 (50%), Gaps = 8/281 (2%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGR 60 M +I +ILNNNV +V ++ +VMGRG+ F K+ G+ I ++K + + Sbjct: 1 MEYRIAQILNNNVAIVHTRDNKQNIVMGRGVVFHKQKGDLIQEENVDKVFEIKDKNTVND 60 Query: 61 LSELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 L+ LL+++PL+ + T +I Q + ++ IY++LT H A +R +N N Sbjct: 61 LTTLLANVPLDFVTTSYDLIDQVQAKYKFAVEPYIYVTLTTHLFGAYQRLIKNEEDVN-Y 119 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L D+ YP +Q+ ++ +T L + P+ E IA+H ++A S ++ + T+ Sbjct: 120 LPDLSDTYPIPYQIADDVITGFRNSLDISFPESEHKSIALHFINAHTSESINEDKNQTE- 178 Query: 180 MREMLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-LQQAVK 234 E++++++ + + Q Y RL+ HLK+ R+ + + + ++ Sbjct: 179 NDEIIKVVQDELNRNGIYRTQPNVNDYDRLLVHLKYFINRLNNNEPDSLPISEGMIGEIE 238 Query: 235 QNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 NY QAWQ ++I + + Q +S +E +L I+I+R+ Sbjct: 239 NNYSQAWQIVQQIKELMQEKLQINLSLSEQTYLTIHIQRLI 279 >UniRef50_UPI0001C368A3 beta-glucoside operon antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368A3 Length = 278 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 139/251 (55%), Gaps = 6/251 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNNVV+ +D RE V GRGIGF E + S I++ Y +N Sbjct: 1 MKVIKKINNNVVICLDHNNRELVAFGRGIGFPAAPYELDDLSKIDRTYY----GVNSSYM 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L++ IP EV +I+ +A + +L ++ +L DH FAI+R Q+N+ L NP L+ Sbjct: 57 GLVNEIPEEVFEVAAKIVDMAVNYIDCELSSNLVFTLADHINFAIERNQRNMNLRNPFLY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL-M 180 DI+ Y KE +G A+ +I + L V LP++E G IA+H ++A+ E+ V+ + Sbjct: 117 DIRYFYEKEMDIGNLAVKMIRRYLKVSLPEEEAGNIALHFINAEALSEKENEFNVSDTVV 176 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 E+ LI+ + ++ + E +Y R V+HL++L R +SI+ + L +K+ +P Sbjct: 177 EEVTYLIEKELNIRIKREDFNYSRFVSHLQYLMKRKDAVSSISSDNIKLYMEMKEEFPVI 236 Query: 241 WQCAERIAIFI 251 +QC +I ++ Sbjct: 237 YQCVLKIRDYM 247 >UniRef50_UPI0001C346E1 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C346E1 Length = 275 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 160/278 (57%), Gaps = 8/278 (2%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 I K++NNNV++V +D Q+E V++G+GIGF +AG+ + + ++ + S + + Sbjct: 1 MYIIKKVINNNVILVDNDAQQEFVIIGKGIGFNSKAGQNYHCTEGDELF---SKPHDYDI 57 Query: 62 SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + +IP+ ++ +I+ + L KL DS+ I+L++H FAI+R + + + L Sbjct: 58 HNFVDNIPIGIIKLTLEVINKCKPILNAKLSDSLVITLSEHITFAIERSKNREM--SISL 115 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQL 179 +++ LY EF G+ A+ I+++LGV LP E IA+H V+A+++ ++ D TQ Sbjct: 116 YEVPYLYHLEFIAGKVAVDYINEKLGVNLPPGEASLIALHFVNAKLNNKSVGDTLKFTQT 175 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL-EHASINDSDESLQQAVKQNYP 238 + +++ +I + F + ++ S+ R + HLK+L R H + + L++ V++ Sbjct: 176 VYKIVNIINYSFHIQVNTDADSFSRFINHLKYLLIRCQTNHDKSSQFNSVLEELVEKELL 235 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + CA++IA I +Y +S EI++LA++IER+ Sbjct: 236 KNFACAKKIAALIQSEYTIPVSREEIIYLALHIERLLH 273 >UniRef50_C3RPC3 Transcription antiterminator licT n=2 Tax=Bacteria RepID=C3RPC3_9MOLU Length = 289 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 138/278 (49%), Gaps = 10/278 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ K +NNN+ + +D + E +V +GIG+ E + S IE+ + +++ R Sbjct: 1 MKVIKKINNNIAIAVDGENNEVIVFAKGIGYGNIPYEIKDLSVIERTFY----DVDNRYY 56 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL IP + +++ +A++ + L ++ L DH FAI R + + + P + Sbjct: 57 GLLKEIPNNIFNLVTKMVDVAKKNIEDELSPNLVFILADHINFAIIREKNGMDISLPYSY 116 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV-----AGV 176 +++ YP ++ + + ++ L LPK EV I MH ++A N + + Sbjct: 117 ELEYEYPLLTKISKWMVKKTNEELDTHLPKGEVTSITMHFINALEGTNTKMHAGNIENKI 176 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 ++++ + +++ F+ N ++S +Y R HLK+ R D++ L +++ + Sbjct: 177 SKVIFNVTNIVEKHFNFNIDKKSFNYFRFKNHLKYFVQRKEAREMFTDNNRELYESMIEK 236 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274 YP + C +I + +Y+ K + E+++L +++ R+ Sbjct: 237 YPDTYDCISKIDNYFYQEYKEKCTTEELLYLLVHVNRL 274 >UniRef50_Q6GH48 Protein glcT n=59 Tax=Staphylococcus RepID=GLCT_STAAR Length = 283 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 4/255 (1%) Query: 21 QREKVVMGRGIGFQKRAGERINSSGI--EKEYALSSHELNGRLSELLSHIPLEVMATCDR 78 +E +++G+GIGF K+ G +N I EK Y L S + L+ V+ Sbjct: 21 DQEVILIGKGIGFNKKEGMTLNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID 80 Query: 79 IISLAQERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEA 137 ++ + + +SLTDH FA KR +QN ++ NP + + +LY + + ++ Sbjct: 81 SLNFISNTAMNVDSKQLVVSLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQV 140 Query: 138 LTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 + ++ L V P+DE+GFIA+H+ S +M ++ + ++++ + +I+ + Sbjct: 141 IDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDK 200 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 ESL YQR + H++FL R+ I+ D+ +K +YP + A +I I Q+ Sbjct: 201 ESLQYQRFIRHVQFLIRRLRRKEYIHAQDD-FVSMIKNHYPICYNTAYKILTMIQKQFDV 259 Query: 258 KISPAEIMFLAINIE 272 IS +EI++L ++I Sbjct: 260 NISESEIIYLTLHIH 274 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%) Query: 74 ATCDRIISLAQERLGKLQDSI---YISLTDHCQFAIKRFQQNVLLP--NPLLWDIQRLYP 128 + I + + L D Y H QF I+R ++ + + + I+ YP Sbjct: 181 NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP 240 Query: 129 KEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 + + LT+I K+ V + + E+ ++ +H+ + N Sbjct: 241 ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS 283 >UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1A7_ERYRH Length = 289 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 142/275 (51%), Gaps = 5/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 ++ + +N+V D+ + +++G+GIGF ++ I+ + Y + + + Sbjct: 18 FKVVRAFTHNIVFAQLDKY-DYILIGKGIGFDAKSKAVIDEESVTSFYRIQDLDKMSQYE 76 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +++ + +V+ + I+ A++ L +SI+ISL DH FAI R+ V + N Sbjct: 77 KIVMNTDDQVLLVTEAAIAYAEKTLNYKFDESIHISLLDHINFAIYRYHNRVKMSNFFTE 136 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 + +Y + + + + + +I+ L V+LP EVG + +HL +A G + + A Q++ Sbjct: 137 EYYLMYSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAAMHQGKVSNSAFYAQVIT 196 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 + I + + + S+ RL+THLKF R ++ ++ + L +++ Y +A+ Sbjct: 197 ASVDFINKRIPEEFTQNSVGKARLITHLKFAFKRSEDNVTLTN---PLIDILRERYCEAY 253 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + +E +A+ + ++ ++ +EI ++A++I ++ Sbjct: 254 EISEDLALMLDQEFNIQLPESEIGYIALHIYNLQH 288 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/116 (8%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 162 VSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS 221 +S M V + + + + + + + L+ H+ F +R Sbjct: 72 MSQYEKIVMNTDDQVLLVTEAAIAYAEKTLNYKF--DESIHISLLDHINFAIYRYHNRVK 129 Query: 222 INDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 +++ + Y + + ++ + I + ++ +E+ + +++ + Sbjct: 130 MSN---FFTEEYYLMYSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAAMHQ 182 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 110/292 (37%), Gaps = 37/292 (12%) Query: 13 VVVVIDDQQREKVVMGRGIGFQKRAGE---------------------RINSSGI----- 46 V +D + E+ V G+ ++ G ++ Sbjct: 121 ATVSLDLDKVEQTVEAYGLSLIRKRGYGVELAGSESAKRRLMSDLLFRHVDEHEFLALMK 180 Query: 47 EKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFA 105 E + L+ +LL + + ++ ++ I +E+L + DS YI+ H A Sbjct: 181 ETIQKRADAPLDTVAEKLLGLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALA 240 Query: 106 IKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ 165 I+R +Q + KE+++ +++ G+ +P +EVG++ MHL+ A+ Sbjct: 241 IERIKQGEAIHFDPRDLQALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAK 300 Query: 166 MSGNMEDVAGVT-----QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA 220 + +++++ + + ++ + Y+ LV HLK +R+ Sbjct: 301 WRSRQGAMMEEPSLAVGMKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGM 360 Query: 221 SINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 + + L +KQ+Y + + A + + EI +L ++ Sbjct: 361 GVAN---PLLDQIKQDYAELFAIVADGARQLFG--DIPVPDEEIGYLVLHFA 407 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 90/272 (33%), Gaps = 31/272 (11%) Query: 17 IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATC 76 D Q E V+ G+G K+AG I +EL + Sbjct: 39 RDLQGIESVLRRYGLGLAKKAGIGI-------RLVGEEENKQALAAELFR-LSHHEYTPE 90 Query: 77 DRIISLAQERLGKLQDSIYISLTDHCQFAIKRF-----QQNVLLPNPLLWDIQRL-YPKE 130 +R + + L + +SL + + + L I++ Y E Sbjct: 91 ERQLMIFIALLEANEPVKLVSLATDLNVTVATVSLDLDKVEQTVEAYGLSLIRKRGYGVE 150 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-----------DVAGVTQL 179 E A + L + DE F+A+ + Q + + Sbjct: 151 LAGSESAKRRLMSDLLFR-HVDEHEFLALMKETIQKRADAPLDTVAEKLLGLVDRKKLSI 209 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + + ++ +K + + SY V HL RI + +I+ L QA++ + Sbjct: 210 IEQQIERVKEKL--PFTMADSSYIAFVVHLALAIERIKQGEAIHFDPRDL-QALQAT--K 264 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ A +A + + I E+ ++ +++ Sbjct: 265 EYEIARVLAESLERAFGIDIPNEEVGYMTMHL 296 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 94 IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDE 153 +Y L H + A+ R + + + NPLL I++ Y + F + + + + +P +E Sbjct: 341 LYEDLVVHLKPALYRLEHGMGVANPLLDQIKQDYAELFAIVADGARQLFG--DIPVPDEE 398 Query: 154 VGFIAMHLVSAQMSGNM 170 +G++ +H +A M Sbjct: 399 IGYLVLHFAAALMREKK 415 >UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lactobacillus gasseri RepID=Q045X5_LACGA Length = 304 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 141/281 (50%), Gaps = 9/281 (3%) Query: 5 ITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSEL 64 I ++ NNN +V RE VV+G GI F+K G+ I++S +E + L + + L Sbjct: 21 IKRVFNNNSALVELGNNREAVVVGNGIAFKKTEGKEIDTSKVENIFYLENSATKRTIFSL 80 Query: 65 LSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 L + P+++ T +++ A ++ +L D Y+SL++H R N + DI Sbjct: 81 LKNTPIDIAVTTMHVVNHAYKKYHYELFDYFYLSLSEHILGVYHRILDNTY-QTSQIPDI 139 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-VTQLMRE 182 + YP E ++ +E++ II++ L ++LP E I +HL++A++ + + E Sbjct: 140 KDEYPLENKIAQESVKIIERDLKIKLPVSERKNIMLHLINARIPEKKQVNREKNIINIEE 199 Query: 183 MLQLIKFQFS----LNYQEESLSYQRLVTHLKFLSWRILEHASINDSD--ESLQQAVKQN 236 ML +++ + Y+R + HL++L R+ + SD + ++ + Sbjct: 200 MLHIVQVILDQHNIYRLASNNDEYERFMIHLQYLFRRLEQGKKFRSSDITKKVKDELISE 259 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+++ + I + +Q +IS E ++L ++I+R+ ++ Sbjct: 260 YPESFVVVKEIDEQLKQDFQWEISDEEKLYLIVHIQRIYEK 300 Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 37/107 (34%), Gaps = 5/107 (4%) Query: 70 LEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL-----LPNPLLWDIQ 124 E++ I+ + Y H Q+ +R +Q + + ++ Sbjct: 198 EEMLHIVQVILDQHNIYRLASNNDEYERFMIHLQYLFRRLEQGKKFRSSDITKKVKDELI 257 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 YP+ F + +E + + ++ +E ++ +H+ + Sbjct: 258 SEYPESFVVVKEIDEQLKQDFQWEISDEEKLYLIVHIQRIYEKSSKY 304 >UniRef50_A8RFC1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFC1_9FIRM Length = 290 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 133/282 (47%), Gaps = 5/282 (1%) Query: 1 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQK-RAGERINSSGIEKEYALSSHELNG 59 M+ K +NNN + ++ E +++G+ IG + R+ + + + ++ +E Sbjct: 3 MDYFYLKTINNNAICATNEYHHEVIILGKAIGIKCNRSFHSLVDKKLIERVFIADNENRK 62 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 + ++ IP + D +I A++ L K +D +Y+SL DH FA K ++ + NP Sbjct: 63 YIETIIGQIPYTLFKVVDDVIKQAEDDLQTKFKDVLYLSLLDHIYFAYKTWEDKQKIENP 122 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ 178 LL +++ KEF + ++ II+ L + E FIA H ++A + + + + Sbjct: 123 LLNELKMFNSKEFNAAKHSIQIINNTLKTDFDEHEAAFIAFHYINALSNLSSFQNKTIMK 182 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ---AVKQ 235 + + + I + + + S Y RL+ HLK L R++ I + ++K Sbjct: 183 DLEQTVNYIDKLTNYSLDKSSYLYGRLLIHLKCLFNRLVTDERIEYDAAFINDFSNSLKV 242 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 + + W+ A +I+ F+ + ++ E +L ++I + K+ Sbjct: 243 AHEEEWEYAVKISSFMKYELHLNVNDGETAYLTMHIVPILKQ 284 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 110/274 (40%), Gaps = 19/274 (6%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSH---ELNGRLSELLSHIP 69 + D ++ EK++ + KR G RI + + +++ + + L+E + Sbjct: 150 ISADLKEVEKILEAYSLKLAKRPNYGIRIEGTEFNRRLCIANIIIGKESEALAEGEAEHQ 209 Query: 70 LEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 + + + + Y +L H A++R Q+N +P + K Sbjct: 210 ENMTRVARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRSK 269 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM-----------SGNMEDVAGVTQ 178 E+++ ++ +++ ++ P E+ +IA+HL Q +G + Sbjct: 270 EYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAGKQSLFLPEQERTGEAGGQVISEETWE 329 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 ++ +ML + F +++ + L H+ L+ R+ + + + L + +K +P Sbjct: 330 VVSQMLDAVYEAFLFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKN---PLLKDIKARFP 386 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 A+ A + + +Y ++ E+ +LA+ Sbjct: 387 MAYAIALHSSSILTERYGHELKDDEVGYLALAFA 420 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 18/190 (9%) Query: 6 TKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGER------------------INSSGIE 47 + + N V +D++++E++ + ++ ER I+ +G + Sbjct: 246 VQRIQENCYVPLDEERQERIRRSKEYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAGKQ 305 Query: 48 KEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIK 107 + +++S EV++ + A + + ++L H Sbjct: 306 SLFLPEQERTGEAGGQVISEETWEVVSQMLDAVYEAFLFDFRSDLELRMNLAQHIVPLAV 365 Query: 108 RFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS 167 R Q N+ L NPLL DI+ +P + + + +I+ +R G +L DEVG++A+ A Sbjct: 366 RLQYNMKLKNPLLKDIKARFPMAYAIALHSSSILTERYGHELKDDEVGYLALAFALAIER 425 Query: 168 GNMEDVAGVT 177 N E Sbjct: 426 QNTELPKKNI 435 >UniRef50_C3RHS5 BglG family transcriptional antiterminator n=2 Tax=Bacteria RepID=C3RHS5_9MOLU Length = 279 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 143/275 (52%), Gaps = 3/275 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 +I KILNNN + ++ + E +++G G+GF + + I K Y L ++ L + Sbjct: 6 YRINKILNNNAIEIL-ENGTEIIIIGNGVGFNHKVNDYITMKENYKLYTLQNNLLKIQFK 64 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 LL+ IP + + II +A+ L + +SL+DH F K + + + + Sbjct: 65 ALLNEIPFKCIELTQEIIDMAKTDLNRNFNQGLLVSLSDHINFVSKNYLKGYGSYSLVSE 124 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+R Y +E+++G +AL +I++ + L K E IA HL++A+ + N+ + + + Sbjct: 125 EIKRFYHEEYEVGLKALDLINRYYQINLNKKEASAIAFHLINAEFNNNVSKTTSILKSID 184 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAW 241 ++L +I+ F L E+SL Y RLV HLKF R+++ S +++ E L + K + + Sbjct: 185 DILNIIEANFGLELPEDSLYYSRLVIHLKFFMQRVIKGESDDENFEKLIISAKSDINKKI 244 Query: 242 QCAER-IAIFIGLQYQRKISPAEIMFLAINIERVR 275 I ++ ++ +S AE +L ++I R+ Sbjct: 245 GITLDSIERYLNEEFDYVLSEAERFYLLVHISRII 279 >UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWD6_9BACI Length = 287 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 9/280 (3%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 ++ K LNNNV++ D +E + +G+GIGF K+AG +S +K Y L + R Sbjct: 5 TYRVVKALNNNVLIAKTDIDQEVIFIGKGIGFGKKAGHDYQASKSDKVYMLIDQDEQDRY 64 Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L++ E + I+ + + +L DS +LT H A++R + NP L Sbjct: 65 KALVTEDNEERLLAVHEAIARIESEMAIRLPDSALFALTQHLALALQRTTDGTDIQNPFL 124 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA-GVTQL 179 + + LY ++L E+A+ + K G+ LP+ E+GF+ +H+ SA E + + Sbjct: 125 LETKWLYRDSYRLAEQAVHFLMKETGLSLPEAEIGFVTLHIQSALRDSGPEYSNRNLEDV 184 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV---KQN 236 + L I+ + + E S + +RL++ + +I+ +D + + A+ KQ+ Sbjct: 185 LERCLFYIEEKTGASLDERSGTVRRLISQIS----QIVHEPDPDDGENIVTDAILNLKQS 240 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 + + + I ++ + + L + + V Sbjct: 241 DGLCYTVSRNVIRMIEKGTGKQAGDKDALHLMLALHSVMN 280 >UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriaceae RepID=O07655_ECOLX Length = 293 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 141/269 (52%), Gaps = 4/269 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M I K++NNN V +E ++ G G+G+ K+ G + + + + + + +L Sbjct: 20 MIIEKVMNNNCVQAS-MNGQEVIISGPGVGYNKKYGMLVPEHPANRIFYVRNEQ-KNKLY 77 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 +L+ H+ +E ++ ++I+ A++ L L S+ + L DH AI R + + N L Sbjct: 78 KLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLD 137 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMR 181 +I+ LY E+ + +ALTII+++ VQLP DE+GFIA+H+++ + + + +L + Sbjct: 138 EIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQ 197 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD-ESLQQAVKQNYPQA 240 + +LI+ ++ + S +Y R + HLK+LS R+L + I D + + + Sbjct: 198 IITELIEVVYNRKVERSSSNYSRFMMHLKYLSSRVLCNEKIKQKDIGDIYEQFLEKDILL 257 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAI 269 + I ++ ++ ++ E ++L+I Sbjct: 258 QRAIHEIERYLYATFKYELILEEKLYLSI 286 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 8/133 (6%) Query: 142 DKRLGVQLPKDEVGFIAMHLVSAQMSGNM---EDVAGVTQLMREMLQLIKFQFSLNYQEE 198 +K+ G+ +P+ I + + +++Q + N Sbjct: 50 NKKYGMLVPEHPANRIFYVRNEQKNKLYKLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPS 109 Query: 199 SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRK 258 L L H+ R++ IN+ +K Y + + I Q+ + Sbjct: 110 LLLI--LADHISNAISRVVSGIQINN---VFLDEIKALYKAEYAISRDALTIINEQFSVQ 164 Query: 259 ISPAEIMFLAINI 271 + EI F+A++I Sbjct: 165 LPDDEIGFIALHI 177 >UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacillus johnsonii FI9785 RepID=D0R5U6_LACJF Length = 295 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 143/257 (55%), Gaps = 8/257 (3%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M K NN+ +V DDQ +E+VV+G+G+GF + G++I+ S IE+ + +SH+ Sbjct: 1 MIFLKTFNNSAALVQDDQGQEQVVLGKGVGFGLKKGDKIDESKIERRFIANSHQDEVNQ- 59 Query: 63 ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLP-NPLL 120 + I + +++I + + L K D +++L DH FA+ R + N+ + + Sbjct: 60 --VKEINASTIDLTNKVIQMVEPLLNVKFNDFQHLALADHIDFALSRIEDNIDISAANIR 117 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQL 179 W+++ L+PKE+++ E+ + +I+K + V LP E F+ H V+A + ++ +T+ Sbjct: 118 WEVKNLFPKEYKISEKVIALINKEMKVNLPASESTFMTYHFVNAASDNDQVQETVEITEF 177 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN--DSDESLQQAVKQNY 237 + ++ +I++++ ++ ES +Y R +THL+ L R+L + + D SL +K Y Sbjct: 178 ISGIIDIIQYKYQMDLATESFNYSRFITHLRVLLVRLLRNKHHKSGELDGSLLGFMKIKY 237 Query: 238 PQAWQCAERIAIFIGLQ 254 A+ AE+IA ++ + Sbjct: 238 NHAYDTAEQIATYLHSK 254 Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 61/138 (44%), Gaps = 5/138 (3%) Query: 141 IDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESL 200 + K + K E FIA +++ E A L +++Q+++ ++ + + Sbjct: 33 LKKGDKIDESKIERRFIANS-HQDEVNQVKEINASTIDLTNKVIQMVEPLLNVKFNDFQH 91 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKIS 260 L H+ F RI ++ I+ ++ ++ VK +P+ ++ +E++ I + + + Sbjct: 92 LA--LADHIDFALSRIEDNIDISAAN--IRWEVKNLFPKEYKISEKVIALINKEMKVNLP 147 Query: 261 PAEIMFLAINIERVRKEH 278 +E F+ + ++ Sbjct: 148 ASESTFMTYHFVNAASDN 165 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 96/219 (43%), Gaps = 12/219 (5%) Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL + +++ ++++ + L L D+ +I L H AI+R ++ + Sbjct: 195 QYLLKLVDKQMIHDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIHIDTA 254 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG--------NMED 172 +E+++ +E I + ++P+DE+G+I MHL+ A+ ++ D Sbjct: 255 TLAALRKRREYRMAKELARRITAQFQTEVPEDEIGYITMHLMGARSFYRKGDDEVVSVMD 314 Query: 173 VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQA 232 + ++ R +++ + + + + LV HL R+ H I + L + Sbjct: 315 NFHLVRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRN---PLLEE 371 Query: 233 VKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ YP+ + A + + + + AE+ ++A+++ Sbjct: 372 MRSAYPELMELAGKAVKPMEQELGEALPEAEVAYIAMHL 410 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 46/74 (62%) Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 +++ L +H +I R + ++ + NPLL +++ YP+ +L +A+ +++ LG LP Sbjct: 340 NKELFLGLVNHLGPSISRLRMHMDIRNPLLEEMRSAYPELMELAGKAVKPMEQELGEALP 399 Query: 151 KDEVGFIAMHLVSA 164 + EV +IAMHL +A Sbjct: 400 EAEVAYIAMHLGAA 413 >UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR0_9ACTN Length = 188 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 5/187 (2%) Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 + L DH Q+A++R + + NPL ++ +YP+E +LG + ++ +R+GV LP+ E+ Sbjct: 1 MVCLADHLQYALERTGDGIAIENPLSHEVAFVYPREVELGRRGIELVSERMGVNLPESEI 60 Query: 155 GFIAMHLVSAQMS-----GNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHL 209 IA+HLV+A++ +M+ V T ++ Q+I+ Q S +Y R V HL Sbjct: 61 TSIALHLVNAEVDGMGSSQDMDLVMKSTVILERATQVIEGQLGQQLDRTSYAYVRFVAHL 120 Query: 210 KFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 +FL R++ + L + +++P A++CA I ++ Y S E+++L + Sbjct: 121 RFLIRRLMRGGCKETENSGLFRQAARDFPDAYRCAAGINEYLKRDYNWSCSDEEMLYLMM 180 Query: 270 NIERVRK 276 ++ R+R+ Sbjct: 181 HVNRLRQ 187 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 10/150 (6%) Query: 22 REKVVMGRGIGF-QKRAGERINSSGIEKEYA-----LSSHELNGRLSELLSHIPLEVMAT 75 RE + RGI +R G + S I + + +L+ ++ Sbjct: 35 REVELGRRGIELVSERMGVNLPESEITSIALHLVNAEVDGMGSSQDMDLVMK-STVILER 93 Query: 76 CDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQN--VLLPNP-LLWDIQRLYPKEFQ 132 ++I + Y+ H +F I+R + N L R +P ++ Sbjct: 94 ATQVIEGQLGQQLDRTSYAYVRFVAHLRFLIRRLMRGGCKETENSGLFRQAARDFPDAYR 153 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLV 162 + + +E+ ++ MH+ Sbjct: 154 CAAGINEYLKRDYNWSCSDEEMLYLMMHVN 183 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 13/251 (5%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII-SLAQERLGK 89 GF+ R E + + LSE +P + + I + Sbjct: 148 YGFKLRGEELRLRYCMAEYLVDDREPEPDLLSEKAGILPKDDIHVIRTAIMKQVRNHKIP 207 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 L +L H A KR + + E+Q E + ++ L V Sbjct: 208 LSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQSAEAIVKELESALSVTF 267 Query: 150 PKDEVGFIAMHLVSAQMSGNME---------DVAGVTQLMREMLQLIKFQFSLNYQEESL 200 P+ E +IA+HL+ + + ++L M++ I+ + L +++ Sbjct: 268 PEQETAYIAIHLLGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEAIERELKLGITDDNE 327 Query: 201 SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKIS 260 L H+K R ++ + + A+K+NYP A++ I I Q I Sbjct: 328 LKAGLALHIKPAINRNRYGMNLRN---PMLSAIKENYPLAFEAGVIAGIVIKEQTGIDIH 384 Query: 261 PAEIMFLAINI 271 EI +LA++ Sbjct: 385 ENEIGYLALHF 395 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%) Query: 62 SELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQNVLLPNP 118 EL I E + +I + L + + L H + AI R + + L NP Sbjct: 293 KELTRLIDGETSRLTEAMIEAIERELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNP 352 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 +L I+ YP F+ G A +I ++ G+ + ++E+G++A+H +A E Sbjct: 353 MLSAIKENYPLAFEAGVIAGIVIKEQTGIDIHENEIGYLALHFGAAIERRKTERPPK 409 >UniRef50_C6VMT2 Transcription antiterminator n=4 Tax=Lactobacillus plantarum RepID=C6VMT2_LACPJ Length = 220 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 127/219 (57%), Gaps = 5/219 (2%) Query: 65 LSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 ++ I E +II LA+++L + ISLTDH FA+ R + + N +LW+ Sbjct: 1 MADIEPEYFEVASQIIELAEQQLQTTFNVYLLISLTDHIHFAVYRHHHQMDIHNEILWET 60 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV-SAQMSGNMEDVAGVTQLMRE 182 +R+Y +EFQ+G +AL +I K V L +DE GFIAM V ++ N + +T+L+ + Sbjct: 61 KRIYHREFQVGMQALALIKKHFDVTLLEDEAGFIAMKFVENSMADSNTDQTLAMTKLIND 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIND---SDESLQQAVKQNYPQ 239 +L ++K+Q SL +ES+S QR + HL+F + R+ D+ L + + + YP+ Sbjct: 121 ILNIVKYQLSLTMPDESVSLQRFLVHLRFFAERLTLKRPDQSQGADDDFLFEHLSKQYPR 180 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 A+ C ++IA+F+ ++ +S E ++L ++I+R+ E+ Sbjct: 181 AFACVQKIAVFVKKSTEQTVSVNERIYLIMHIQRMLNEN 219 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 9/198 (4%) Query: 81 SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTI 140 A+ +L + + + +L H A+ R + +P + + E++ E+ Sbjct: 11 EAAEAQLLTINAAAFQNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSEYRAAEDIARR 70 Query: 141 IDKRLGVQLPKDEVGFIAMHLVSAQM------SGNMEDVAGVTQLMREMLQLIKFQFSLN 194 ID + LP++EV +IA+HL Q ++ V Q++ +ML + F + Sbjct: 71 IDALTSISLPQEEVAYIAIHLAGKQTIYQTPDESSLVISDEVWQVVSDMLDRVWRVFRFD 130 Query: 195 YQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQ 254 ++ + L H++ LS R+ + + + + +K YP ++ A + I Sbjct: 131 FRNDLELRMNLARHIQPLSVRLRYNLKLKN---PMLDDIKARYPLSFSIAVDASTVIAEA 187 Query: 255 YQRKISPAEIMFLAINIE 272 Y +S EI ++A+ E Sbjct: 188 YGAPLSHDEIGYVALAFE 205 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 3/113 (2%) Query: 68 IPLEVMATCDRIISLAQE--RLGKLQD-SIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I EV ++ R D + ++L H Q R + N+ L NP+L DI+ Sbjct: 108 ISDEVWQVVSDMLDRVWRVFRFDFRNDLELRMNLARHIQPLSVRLRYNLKLKNPMLDDIK 167 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 YP F + +A T+I + G L DE+G++A+ A E V Sbjct: 168 ARYPLSFSIAVDASTVIAEAYGAPLSHDEIGYVALAFELALERSKTETVKKNI 220 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 11/249 (4%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII-SLAQERLGK 89 GF+ R E + + L+E +P E + I + Sbjct: 148 YGFKLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKKMKNDRIP 207 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 L + +L H A KR + + L+ KE+Q E + ++ +L V Sbjct: 208 LSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQAAEAIVKELESKLSVTF 267 Query: 150 PKDEVGFIAMHLVSAQM-------SGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSY 202 PKDE +I MHL+ + QL M++ + + L + Sbjct: 268 PKDETAYITMHLLGTKRMTQSQCGEDTFSIEEETDQLTLAMIKAVDRELKLGILHDKELK 327 Query: 203 QRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPA 262 L H+K R ++ + + A+K++YP A++ I I Q +I Sbjct: 328 IGLALHMKPAISRNRYGMNLRN---PMLAAIKEHYPLAFEAGIIAGIVIKEQTGIEIHEN 384 Query: 263 EIMFLAINI 271 EI +LA++ Sbjct: 385 EIGYLALHF 393 Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 3/111 (2%) Query: 68 IPLEVMATCDRIISLAQERLGK---LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I E +I L + I L H + AI R + + L NP+L I+ Sbjct: 297 IEEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAIK 356 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 YP F+ G A +I ++ G+++ ++E+G++A+H +A E Sbjct: 357 EHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTESPPK 407 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 22/276 (7%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA-------GERINSSGIEKEYALSSHELNGRLSELLSH 67 + D + + ++ G+ R G+ + EY + L+ L Sbjct: 133 LQNDLKNAKLILARYGLQVATRPNYGLYLKGDELKRRFCMAEYVFERKNVAADLTSLQLT 192 Query: 68 I---PLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 ++ D +++ QE L D +L H A KR + + Sbjct: 193 AFMKEEQLADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHISLYRKDMSD 252 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA---------G 175 E+ + ++ + ++ LGV P+ E+ +IA+HL+ ++ E Sbjct: 253 ICSQHEYYVAQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENEQANDNLKKVFDDE 312 Query: 176 VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQ 235 +L + +++ ++ + LN + L+ HLK R +I + + +KQ Sbjct: 313 YYKLAKAIVEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIRN---PMLADIKQ 369 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +Y A++ A I + I EI +LA++I Sbjct: 370 HYTLAFEAAVIGQAVIKDKLGISIDENEIGYLALHI 405 Score = 79.9 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 62/146 (42%) Query: 30 GIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK 89 G+ F + I + + + N L ++ ++ + + Sbjct: 274 GVSFPEMEIAYIAIHLLGTRLVAENEQANDNLKKVFDDEYYKLAKAIVEKVERELDLNIA 333 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 + +SL H + AI R++ + + NP+L DI++ Y F+ +I +LG+ + Sbjct: 334 NDQELLVSLMLHLKPAINRYRYGMNIRNPMLADIKQHYTLAFEAAVIGQAVIKDKLGISI 393 Query: 150 PKDEVGFIAMHLVSAQMSGNMEDVAG 175 ++E+G++A+H+ +A N + Sbjct: 394 DENEIGYLALHIGAALERRNQQKEPK 419 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 9/213 (4%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 LL + + D ++ A+ + + DS + L H A++R QQ + Sbjct: 216 LLGLVDPAQIRRIDDAVA-AETQDRNIPDSARVGLVVHLALAVRRLQQGDTIAMDAGTLE 274 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME-----DVAGVTQ 178 + +EF + E + + + +P E+G+I MHL+ A+ D + Q Sbjct: 275 ELRQTEEFSVAETIAARMGEVFSISIPAAEIGYITMHLLGARGMTLPSGGGRVDNFRLVQ 334 Query: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238 + + +++ + LV HL R+ H I + L +++ +P Sbjct: 335 IAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRN---PLLAQMEEEHP 391 Query: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + + A + + + E+ ++AI+I Sbjct: 392 ELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHI 424 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 43/74 (58%) Query: 94 IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDE 153 + L +H A+ R + ++ + NPLL ++ +P+ ++ A+ ++++ G+ +P DE Sbjct: 357 LLTGLVNHLAPALHRLKLHMDIRNPLLAQMEEEHPELMEIARHAIPMMEEEAGMPVPNDE 416 Query: 154 VGFIAMHLVSAQMS 167 V +IA+H+ +A Sbjct: 417 VAYIAIHIGAALTE 430 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 98/236 (41%), Gaps = 15/236 (6%) Query: 49 EYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIK 107 Y SS ++ ++++L I + + I +A+ L D+ + L H AIK Sbjct: 192 IYTRSSVGIDKQITKLFEDIDIPYIE---ECIQIAERELETVFSDAAFSGLVIHIAIAIK 248 Query: 108 RFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS 167 R Q + P KEF + +++ V +P DE+G+I +HL+ + +S Sbjct: 249 RIQLGKDIIMPKEELKALEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNVS 308 Query: 168 G----NMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASIN 223 E+ L +++ + + + + ++ L+ HL+ +R+ + Sbjct: 309 KTRPYPNENWVEYQLLTEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKLK 368 Query: 224 DSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVR 275 + + +K NY + ++ + + + ++ EI + I+ IER++ Sbjct: 369 N---PILDEIKANYKELFEIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLK 421 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 58/141 (41%), Gaps = 1/141 (0%) Query: 36 RAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM-ATCDRIISLAQERLGKLQDSI 94 + ++ G + L S+ R + + +++ ++ + + Sbjct: 287 KVSIPLDEIGYITVHLLGSNVSKTRPYPNENWVEYQLLTEKIITNVTNKIHQDLSGDRQL 346 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 + L DH + + R + + L NP+L +I+ Y + F++ +E+L ++ G L +E+ Sbjct: 347 FEGLLDHLRPTVYRLKHGLKLKNPILDEIKANYKELFEIVKESLKPLEDYTGKALNDEEI 406 Query: 155 GFIAMHLVSAQMSGNMEDVAG 175 G+ +H +A + Sbjct: 407 GYFTIHFGAAIERLKVTKAPK 427 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 97/222 (43%), Gaps = 11/222 (4%) Query: 56 ELNGRLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVL 114 +++ LL I E + + +S E L L DS Y+ L H A++R ++ Sbjct: 190 DIDSIAERLLGLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEG 249 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME--- 171 + + E+++ + + + +++P DE+G+I MHL A++ + + Sbjct: 250 IHFDEHTLSELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPDDQV 309 Query: 172 --DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + + + + +Q + + + ++ + L+THL+ +R+ I + + Sbjct: 310 WPENTELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRN---PI 366 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + +KQNYP+ + I + ++ EI +L +++ Sbjct: 367 LEQIKQNYPELFAVTSEAVHTILPEL--RVPDEEIGYLVMHL 406 Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 71 EVMATCDRIISLAQERLGKLQDS---IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLY 127 E+M R I +ERL + ++ L H + A+ R Q+ + + NP+L I++ Y Sbjct: 315 ELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRNPILEQIKQNY 374 Query: 128 PKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 P+ F + EA+ I L V P +E+G++ MHL +A E Sbjct: 375 PELFAVTSEAVHTILPELRV--PDEEIGYLVMHLGAALERTRHEQ 417 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 146 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 14/213 (6%) Query: 71 EVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 E + + A + Y +L H A+ R +P Sbjct: 157 ESLEVIAASVEDALTDGPININAISYQNLLVHIAIALVRINAGCYVPLASEDMSDIERRS 216 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN----------MEDVAGVTQL 179 E+ I RLG++LP++EV +IA+HL + + + + L Sbjct: 217 EYAAARRVAGGIKSRLGMELPEEEVAYIAIHLAGKRTLNDALSNEEPEGGLVISDEIWAL 276 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +ML ++ F ++ E+ L HL L+ R+ ++ + L + +YP Sbjct: 277 VSDMLDSVRTHFHFDFDEDIELRMNLARHLVPLAVRLRSQMNLKN---PLLGDITTHYPL 333 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 AW A + ++ S EI ++A+ Sbjct: 334 AWSMAVDACEVLHREFGTAPSNDEIGYIAMAFA 366 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 9/153 (5%) Query: 32 GFQKRAGERINSSGI--EKEYALSSHELNGRLSELLSH----IPLEVMATCDRIISLAQE 85 G + R G + + + LN LS I E+ A ++ + Sbjct: 227 GIKSRLGMELPEEEVAYIAIHLAGKRTLNDALSNEEPEGGLVISDEIWALVSDMLDSVRT 286 Query: 86 RLGKLQDS---IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIID 142 D + ++L H R + + L NPLL DI YP + + +A ++ Sbjct: 287 HFHFDFDEDIELRMNLARHLVPLAVRLRSQMNLKNPLLGDITTHYPLAWSMAVDACEVLH 346 Query: 143 KRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 + G DE+G+IAM A + Sbjct: 347 REFGTAPSNDEIGYIAMAFALALERQRSQAPRK 379 >UniRef50_C4FUJ1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUJ1_9FIRM Length = 283 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 138/280 (49%), Gaps = 7/280 (2%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M++ + LN N V+V D E V +G+G+GF K+ G+ I+ + + + ++L+S +L Sbjct: 1 MKVIQSLNQNAVLVARDDGAELVALGKGVGFGKKKGDTIDPTAVTRVFSLASSYRQEQLL 60 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121 L+ + V I +A+ L K L D+ ++ H Q+A+ R +P + Sbjct: 61 GLIKELEPWVFELAQDITIIAEACLKKSLMDTFIFTIAKHLQYALDREPNEEGDYDPFQY 120 Query: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-NMEDVAGVTQLM 180 + LYP E+Q EA+ ++ + ++L ++EV F+ +HLV+ Q+ +V +++++ Sbjct: 121 QLHYLYPDEYQAAAEAIAQVNAKYQLRLAQEEVSFLTLHLVNGQIDQAGFHNVVELSEIL 180 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDES-----LQQAVKQ 235 ++Q+I+ + +ES Y R V H+++ R L H + ++ + + Sbjct: 181 NRLIQVIEAKTGEPLDKESPDYGRFVVHIRYFLIRTLSHQTGQEAVSPEKIETVLETTAG 240 Query: 236 NYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVR 275 +P+ W + + + ++ E +L +++ R+ Sbjct: 241 VFPREWGLVKALKETLQAEFNLSFGQDEDFYLLLHLVRIL 280 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 113/292 (38%), Gaps = 37/292 (12%) Query: 13 VVVVIDDQQREKVVMGRGIGFQKRAGERIN-------SSGIEKEYALSSHELNGRLS--- 62 + D + E+ V G+ ++ G + + E + + S Sbjct: 121 ATISNDLDKVEEKVEKHGLALVRKRGYGVEIAGSEAAKRKMMSELLFDHFDESQFFSFMK 180 Query: 63 ----------------ELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFA 105 +LL + + + +R I ++ L + DS YI+L H A Sbjct: 181 ESIQKKSTDLVNTVTEKLLGLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALA 240 Query: 106 IKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ 165 I+R Q + KE++ E+ +++ + +PK+E+G+I MHL+ A+ Sbjct: 241 IERIMQGEAIHFDAQHLQTISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAK 300 Query: 166 MSGNMEDV-----AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHA 220 + + + + +E+++ + Q ++ ++ Y+ L+ HLK +RI H Sbjct: 301 LRTHRGYMLEEASLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHM 360 Query: 221 SINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 I + L + ++Y + + +R + + E+ +L ++ Sbjct: 361 GITN---PLLHKIMEDYSELFHVVQRGVRHVFS--DMTVPEEEVGYLVLHFA 407 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 31/272 (11%) Query: 17 IDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATC 76 D + E+V + K+AG I + E +L + + Sbjct: 39 RDLKGVEQVAEAYNLQLIKKAGVGI--------QIVGDEEKKHQLQMRVFRLSHTEYTPE 90 Query: 77 DRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI------QRLYPKE 130 +R + L + ISL + + ++ + +R Y E Sbjct: 91 ERQTMILIALLESGEPVKLISLANDLNVTVATISNDLDKVEEKVEKHGLALVRKRGYGVE 150 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-----------EDVAGVTQL 179 E A + L DE F + S Q + Sbjct: 151 IAGSEAAKRKMMSELLFD-HFDESQFFSFMKESIQKKSTDLVNTVTEKLLGLVDKKKLFM 209 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + ++ +K + S Y LV HL RI++ +I+ + LQ + + Sbjct: 210 IERQIEAMKDDLPFTIADSS--YIALVIHLALAIERIMQGEAIHFDAQHLQTI---SMTK 264 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++ AE+IA + + I EI ++ +++ Sbjct: 265 EYETAEKIAKRLEEVFHLVIPKEEIGYITMHL 296 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDS--IYISLTDHCQFAIKRFQQNVLLPNPLL 120 +L LE+ +I E++ L D +Y L H + A+ R Q ++ + NPLL Sbjct: 308 MLEEASLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLL 367 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM 170 I Y + F + + + + + +P++EVG++ +H SA + Sbjct: 368 HKIMEDYSELFHVVQRGVRHVFS--DMTVPEEEVGYLVLHFASALLRDKQ 415 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 28/268 (10%) Query: 16 VIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMAT 75 V+++ EK ++G QK+A E +L+S I L + + Sbjct: 167 VLEETANEKELVGFLRQIQKKALEE----------RNLEPGFFKEFDKLVSGIDLTKIES 216 Query: 76 CDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLG 134 IS A+++L + D Y SL H AI R + + P E+++ Sbjct: 217 V---ISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQLPEERLKVIKKSDEYKIA 273 Query: 135 EEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG-----------NMEDVAGVTQLMREM 183 ++ I+++ + +P E+G++ +HL+ A++ N + + L +EM Sbjct: 274 KKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLINQDLDQELIILTKEM 333 Query: 184 LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 +++ + + +++ L HLK RI + + L VK Y + ++ Sbjct: 334 VKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKN---PLLLDVKSRYGEIFKA 390 Query: 244 AERIAIFIGLQYQRKISPAEIMFLAINI 271 A+R A + + Q+ IS EI ++ +++ Sbjct: 391 AKRAAKILQSKLQKSISSDEIGYITLHL 418 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Query: 58 NGRLSELLS-HIPLEVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQNV 113 + +L++ + E++ ++ +A++ LG + I L H + I R + ++ Sbjct: 311 DDDYKKLINQDLDQELIILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDL 370 Query: 114 LLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 L NPLL D++ Y + F+ + A I+ +L + DE+G+I +HL +A Sbjct: 371 PLKNPLLLDVKSRYGEIFKAAKRAAKILQSKLQKSISSDEIGYITLHLGAALERSKSS 428 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 98/225 (43%), Gaps = 6/225 (2%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK-LQDSIYISLTDHCQFAIKR 108 Y ++ LL+ I + + ++ I + ++ + +S Y+ L H AIKR Sbjct: 181 YLAKNNIEKNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKR 240 Query: 109 FQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 Q + + E++ ++ + + L + +P+DE+G++ +HL+ A+ Sbjct: 241 LQNGETIEMGEDNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRS 300 Query: 169 N--MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSD 226 + + + R+M++ + F +++ E+ L +HL +R+ I + Sbjct: 301 TTQNYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRN-- 358 Query: 227 ESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 L + +K YP ++ + R+ + + I E+ ++A++ Sbjct: 359 -PLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHF 402 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 9/173 (5%) Query: 6 TKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGI-----EKEYALSSHELNGR 60 K L N + + + +++ F K+ + + ++ ++ H + + Sbjct: 238 IKRLQNGETIEMGEDNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAK 297 Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQ----DSIYISLTDHCQFAIKRFQQNVLLP 116 + + + R + E++ + + + L H A+ R + + + Sbjct: 298 YRSTTQNYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIR 357 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGN 169 NPLL DI+ YP F+ ++ K+L + +P+DEVG+IAMH +A Sbjct: 358 NPLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKK 410 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 110/289 (38%), Gaps = 32/289 (11%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYAL------------SSHELNGRLS 62 V D + E+ + GI K+ I G EK L +N L Sbjct: 123 VAKDILKVEEFLGKYGIKLYKKPKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDSLK 182 Query: 63 ELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +LL + L + + ++ L D + L H +IKR + + L Sbjct: 183 DLLKDVDLNAIQRIIQGSE--EKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDL 240 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED---------- 172 KE+++ ++ I+KR V + E+G+I MHL+ A++ ++E Sbjct: 241 NLLKKEKEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLKR 300 Query: 173 -VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 + +++ ++ I + + L HLK R+ +++ + Sbjct: 301 LDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDN---PFLE 357 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRK 276 +K+ A++ + + Y+ ++ EI ++AI+ IER++ Sbjct: 358 EIKKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKS 406 Score = 63.4 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 49/126 (38%) Query: 52 LSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQ 111 + + + + + L ++ + I+ + + L H + I R + Sbjct: 288 IETEKFSENYLKRLDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKN 347 Query: 112 NVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME 171 V L NP L +I++ F++ + + + + +DE+G++A+H ++ Sbjct: 348 GVKLDNPFLEEIKKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKSV 407 Query: 172 DVAGVT 177 D T Sbjct: 408 DRNKKT 413 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 109/272 (40%), Gaps = 20/272 (7%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSH---ELNG 59 +++ + L N + V GI + G + Y L + Sbjct: 137 LEVKRKLKENGLKVEKRA-------SYGI---RITGVEVAIRFCFSRYLLVESANPLITD 186 Query: 60 RLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 S + LE++ +IS + + D +L H A+ R + N + Sbjct: 187 TERNFFSEVNLEMIEQV--VISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTD 244 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQL 179 L DI+ P EF+ ++ + ID G+ P+ E+ ++ +HL S + + Sbjct: 245 LEDIEFSIP-EFRAAQDIIKEIDLSEGIHFPESEISYLLLHLSSKNRKSDFNNYREYII- 302 Query: 180 MREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQ 239 + +ML IK + +++++ + HLK R+ + +I + + +K NYP Sbjct: 303 VDKMLTKIKELYGYDFKQDQKMISNIALHLKPAINRMKFNMNIQN---PYLKNLKSNYPL 359 Query: 240 AWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 A++ + + + K++ AE+ +LAI+ Sbjct: 360 AFELGLVAKDVLEQELKTKVNEAEVGYLAIHF 391 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 4/145 (2%) Query: 37 AGERINSSGIEKEYA-LSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIY 95 G S I LSS + +I ++ I K + Sbjct: 269 EGIHFPESEISYLLLHLSSKNRKSDFNNYREYI---IVDKMLTKIKELYGYDFKQDQKMI 325 Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVG 155 ++ H + AI R + N+ + NP L +++ YP F+LG A ++++ L ++ + EVG Sbjct: 326 SNIALHLKPAINRMKFNMNIQNPYLKNLKSNYPLAFELGLVAKDVLEQELKTKVNEAEVG 385 Query: 156 FIAMHLVSAQMSGNMEDVAGVTQLM 180 ++A+H + + D V + Sbjct: 386 YLAIHFLYGLDKEVVSDKQKVLIVC 410 >UniRef50_A6CU78 GlcT (Fragment) n=1 Tax=Bacillus sp. SG-1 RepID=A6CU78_9BACI Length = 182 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 103/181 (56%), Gaps = 1/181 (0%) Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 +LTDH FAI R + + + NP L + + LY E+++ + + ++++ V+LP+ E+GF Sbjct: 1 ALTDHILFAINRLMKGMAIRNPFLMETKALYLFEYEVARDVVALLNEETNVELPEGEIGF 60 Query: 157 IAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRI 216 IA+H+ SA M+ ++ V ++L+ + I+ N +ES+ Y RLV HL++ R+ Sbjct: 61 IALHIHSAMMNKDLSQVNQHSRLIGTLTSTIENTLEANIDKESVHYMRLVRHLRYTIERV 120 Query: 217 LEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 L + + ++ +K+ YP + + ++ + ++ + AE ++L ++++R++ Sbjct: 121 LRQERVQEPEKIAL-LLKEEYPLCYNLSWKLIKIMQQTLKKPVDDAEAVYLTMHLQRIQN 179 Query: 277 E 277 + Sbjct: 180 K 180 >UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG9_9FIRM Length = 217 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 125/209 (59%), Gaps = 1/209 (0%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKL-QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 ++ IP E + I A+E G L ++ ++L DH FAIKR ++N++L NP + Sbjct: 1 MIGAIPPEYFELVEEIFEKAKEEYGFLPKEKETLALLDHIHFAIKRMKENLVLDNPFETE 60 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 I++ YPKE+++G A I +R G+++P EVG+IAMH+++++ + V+ +++ Sbjct: 61 IRQFYPKEWEIGLYAKKCIKRRFGIEIPDAEVGYIAMHIIASEFQKSRRTVSKTFEVIDL 120 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 L+ I+ + + +E+SL+Y RLVTH+K+ + R +++ D DE L Q +K+ + + Sbjct: 121 ALKYIRDNYLTDVKEDSLAYTRLVTHVKYFAQRYVDNKESMDEDELLDQTIKERFQREVC 180 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINI 271 C E ++ + +Y R ++ +E +L +++ Sbjct: 181 CIEGLSEMLYRKYGRPVTVSEENYLVLHL 209 >UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9E2_9CLOT Length = 168 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLMRE 182 QR YP+E+Q EAL I V LP DE G+IA+H V+A Q M+ VT+ ++E Sbjct: 11 QRFYPREYQAAREALKTIAYYENVWLPDDEAGYIALHFVNATQEGEEMQTTIQVTETVQE 70 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++++I+ F+++ E SLSYQRL+TH+++ R+ + D+ L + VK YP+++ Sbjct: 71 LIKMIQIHFNMSLDETSLSYQRLITHIRYFVRRLFVNEPAGGGDDLLFEQVKSAYPRSYT 130 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINIERVRK 276 C +I + +++ +I+ E+ +L ++I RV Sbjct: 131 CVCKIRDYFRMKFHCEITEEEMTYLMLHIRRVTS 164 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 70 LEVMATCDRIISLAQERLGKLQDS---IYISLTDHCQFAIKRFQQNVLL---PNPLLWDI 123 ++V T +I + Q D Y L H ++ ++R N + L + Sbjct: 62 IQVTETVQELIKMIQIHFNMSLDETSLSYQRLITHIRYFVRRLFVNEPAGGGDDLLFEQV 121 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 + YP+ + + + ++ ++E+ ++ +H+ Sbjct: 122 KSAYPRSYTCVCKIRDYFRMKFHCEITEEEMTYLMLHI 159 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 YP+ +Q A I + E ++A++ +E Sbjct: 14 YPREYQAAREALKTIAYYENVWLPDDEAGYIALHFVNATQE 54 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 116/295 (39%), Gaps = 33/295 (11%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEK---------EYALSSHEL---NGRL 61 V+ D ++ E + G+ ++ I G EK H + + Sbjct: 122 VIQYDLEEIEHWLQSFGLVLIRKPHLGIKVEGSEKAWRTALSRLIELFVDHSYYILDSKQ 181 Query: 62 SELLSHIPLEV-MATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL 119 +L+ + + ++ I E L L D ISLT H AIKR ++ + Sbjct: 182 LKLIEDVLKPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIHIDT 241 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM--------- 170 + E++L E+ I++ + V++PK E+G+I +HL+ A++ + Sbjct: 242 NQLQELQKKPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQVHEKEDIEQ 301 Query: 171 ---EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDE 227 + Q+++E++ I +++ L H R+ ++ + Sbjct: 302 LLTKMDYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGLAVKN--- 358 Query: 228 SLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE----RVRKEH 278 L + +KQ Y +++ + I + I EI ++ ++I+ R++ ++ Sbjct: 359 PLLKDIKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAALERMQNKN 413 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 102/267 (38%), Gaps = 29/267 (10%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHEL--------------------NGRLSELLSHIPL 70 I F ++ G I + + LS Sbjct: 130 IQFDRKQGYFIQGNEKDIRAVLSRFLFEQLSYADWNPSSPAFDGLIHTDLFRRHFPAFRE 189 Query: 71 EVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 E + + RII ++++ + D + LT + R +Q + Sbjct: 190 EELDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQLEEEEKAALRETL 249 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS-----GNMEDVAGVTQLMREML 184 +F+ + + +R +++P+DE+G++A++L++A+++ + + + E++ Sbjct: 250 QFKAATQIADELGERFDLRVPEDEIGYLAIYLLAAKVNRVEVESDTWETKRLRAATEEVI 309 Query: 185 QLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCA 244 L + +Q ++L H+K + +RI +I++ L + + Y + ++ Sbjct: 310 DLFAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDN---PLTDKILEEYREVYELT 366 Query: 245 ERIAIFIGLQYQRKISPAEIMFLAINI 271 + A + +++ + EI +L ++ Sbjct: 367 RKSASPLERLFEKPLGRHEIAYLTMHF 393 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%) Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPK 151 +++ L H + R + + + NPL I Y + ++L ++ + +++ L + Sbjct: 324 EALVKQLFLHVKSMFYRIKYGLTIDNPLTDKILEEYREVYELTRKSASPLERLFEKPLGR 383 Query: 152 DEVGFIAMHLVSAQMSGNMEDVA 174 E+ ++ MH + Sbjct: 384 HEIAYLTMHFGGWLKREQAKTEH 406 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 105/241 (43%), Gaps = 12/241 (4%) Query: 39 ERINSSGIEKEYALSSHELNGRLSE-LLSHIPLEVMATCDRIISLAQERLGK-LQDSIYI 96 + KE + +SE LL + E + + I + +L L DS YI Sbjct: 171 DPFQYVEKLKERIQEDVSKSDTISERLLGLVDAEKLDKIEEQIQRMRNQLPYDLADSAYI 230 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 L H A++R Q+ ++ + Q +E+++ E + +++ + +P+DE+G+ Sbjct: 231 GLVVHIALAMERLQKGDIIHFDDEYKEQIKDEQEYKIAAEVIGHLEEAFSLFIPEDEIGY 290 Query: 157 IAMHLVSAQMSGNMED-----VAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKF 211 I MHL+ A++ N + +E+++ + + +++ + L THLK Sbjct: 291 ITMHLMGAKLRENQNYLLEESSMDIAYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKP 350 Query: 212 LSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +R+ + +IN+ + +K++Y + ++ ++ + EI ++ ++ Sbjct: 351 AVYRLKQQMNINN---PMIDEIKKDYIELFEVVDKAIQHV--FPNLAFPDEEIGYIVLHF 405 Query: 272 E 272 Sbjct: 406 A 406 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 56 ELNGRLSELLSHIPLEVMATCDRIISLAQERLG---KLQDSIYISLTDHCQFAIKRFQQN 112 +L + LL +++ +I + + LT H + A+ R +Q Sbjct: 299 KLRENQNYLLEESSMDIAYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQ 358 Query: 113 VLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED 172 + + NP++ +I++ Y + F++ ++A+ + + P +E+G+I +H + + + + Sbjct: 359 MNINNPMIDEIKKDYIELFEVVDKAIQHV--FPNLAFPDEEIGYIVLHFAATFLQTDSQS 416 Query: 173 VAGVTQLMREML 184 V + + Sbjct: 417 NLKVLVICSSGI 428 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 111/275 (40%), Gaps = 16/275 (5%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSH--ELNGRLSELLSHIPL 70 + D ++ K++ + R G ++ +K L+ + + + Sbjct: 118 LHTDLKKVRKILKKYDLTLANRPHYGTKVEGGEFKKRLCLADSIFGWQNKPGQQNTPFNQ 177 Query: 71 EVMATCDRI-ISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 ++ +I I + + + D +L H A KR + + PL + + Y Sbjct: 178 DLFQKVKQILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIE-PLPFHFKESYTF 236 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM---EDVAGVTQLMREMLQL 186 E ++ +E ++K +G+ P E+ +I +HL+ ++ + + ++ +L Sbjct: 237 ERKVAKEITGEVEKSVGIPFPPAEIDYILVHLLGTKLISKHVARQVSDEIDDIVNAILHE 296 Query: 187 IKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 +K QF ++ + L HL R+ I + L +K +P A++ A Sbjct: 297 LKTQFRWDFSNDKEFRNGLTLHLHTSLNRMKYKMHIRN---PLLNEMKTKFPIAFEGAVA 353 Query: 247 IAIFIGLQYQRKISPAEIMFLAINI----ERVRKE 277 I +K++ EI +LAI+I ER+RK+ Sbjct: 354 AGECIEAVIHKKVNEDEISYLAIHIAIALERMRKK 388 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 11/224 (4%) Query: 62 SELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL+ I E + T + +I +A+E + KL DS Y+ L H AIKR + N ++ Sbjct: 203 NRLLNLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNEIIIMDKE 262 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMED-------V 173 + + EF + + + + + +DE+G+I MHL+ ++ GN+ Sbjct: 263 FLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSKNRGNVTKNETSTIGS 322 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 + +L REM+++ + + LV HL+ RI I + L Q + Sbjct: 323 FELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKMKMDIRN---PLLQEI 379 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKE 277 K YP + + + A + +K+ +EI ++A+++ V ++ Sbjct: 380 KTRYPHLIKVSSKCAKVLEDYLGQKMPESEIAYIAMHLGAVIEK 423 Score = 70.3 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 13/170 (7%) Query: 5 ITKILNNNVVVVIDDQQREK-----VVMGRGIGFQKRAGERINSSGIE----KEYALSSH 55 I +I NN ++++ + E ++ R + I+ E + + S Sbjct: 248 IKRIKNNEIIIMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSK 307 Query: 56 ELNGRLSELLSHI-PLEVMATCDRIISLAQERLGKL---QDSIYISLTDHCQFAIKRFQQ 111 S I E++ +I +A+ G + + L +H + AIKR + Sbjct: 308 NRGNVTKNETSTIGSFELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKM 367 Query: 112 NVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 + + NPLL +I+ YP ++ + +++ LG ++P+ E+ +IAMHL Sbjct: 368 KMDIRNPLLQEIKTRYPHLIKVSSKCAKVLEDYLGQKMPESEIAYIAMHL 417 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 98/245 (40%), Gaps = 15/245 (6%) Query: 38 GERINSSGIEKEYALSSHELNGRLSELLSH-----IPLEVMATCDRII-SLAQERLGKLQ 91 G ++ K LS+ L L I E+ +I + ++ Sbjct: 154 GSKVEGDEYMKRLCLSNLLLERNQEAFLKEDCLQLIDPELFKKIKEVIVQKVNKYKIEIS 213 Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPK 151 D +L H A +R Q+ ++ L + +P E + E + ++ + P+ Sbjct: 214 DISLENLATHIAIACRRIQEGFVIEE-LADVLVDDHPFEKIVANEIIKEVEDFTSLTFPE 272 Query: 152 DEVGFIAMHLVSAQMSGNME-----DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLV 206 E+ +I +HL+ ++ E ++ ML +K + + +++++ Q L Sbjct: 273 TEIDYIIVHLLGTKLLHKKELAEFSKFDEAGTIINCMLARLKAELNWDFRQDREFIQALT 332 Query: 207 THLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMF 266 H++ R+ +I + L +K+ YP A++ A + I + ++ EI + Sbjct: 333 LHIRPAMNRLRYKMNIRN---PLLNDIKKKYPAAFEGAIIASKCIEEYLRMEVVEDEIAY 389 Query: 267 LAINI 271 +A++I Sbjct: 390 IALHI 394 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 25/276 (9%) Query: 15 VVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSHELNGRLSELLS----HI 68 + D +Q E+ + G+ +R+ G ++ S + K L+S + G EL + Sbjct: 122 ISNDLKQVEERLAQFGLAIDRRSHHGIKVIGSEMAKRLCLASLAMEGS-DELKGAARLSV 180 Query: 69 PLE-----VMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 E D + + E + Y +L H A+ R ++ +P Sbjct: 181 DAEAYRALFDVVSDCVDDVTTEERFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLT 240 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME----------DV 173 + F + I R GV LP +EV +IA+HL ++ G+ + Sbjct: 241 EIRKSPSFPIARRISDSIGARTGVVLPDEEVAYIAIHLTGKRLLGDFDAGDDQEAGLVIS 300 Query: 174 AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 V + ML + F + + + L HL L R+ H +++ + + Sbjct: 301 DEVWDAVTGMLDAVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDN---PILGDI 357 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 K +P A+ A + Y+ ++S EI ++A+ Sbjct: 358 KSRFPLAYSMAVEAGSSLAAHYEAELSEEEIGYIAL 393 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Query: 194 NYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGL 253 + S++Y+ L+TH+ RI E + E L + ++++ ++ A RI+ IG Sbjct: 204 RFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLTE-IRKS--PSFPIARRISDSIGA 260 Query: 254 QYQRKISPAEIMFLAINI--ERVRKE 277 + + E+ ++AI++ +R+ + Sbjct: 261 RTGVVLPDEEVAYIAIHLTGKRLLGD 286 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 3/111 (2%) Query: 68 IPLEVMATCDRIISLAQERLGK---LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQ 124 I EV ++ + ++L H R ++ L NP+L DI+ Sbjct: 299 ISDEVWDAVTGMLDAVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDNPILGDIK 358 Query: 125 RLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 +P + + EA + + +L ++E+G+IA+ A + Sbjct: 359 SRFPLAYSMAVEAGSSLAAHYEAELSEEEIGYIALSFALALERQKTDAPKK 409 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 102/265 (38%), Gaps = 20/265 (7%) Query: 24 KVVMGRGIGFQKRAGERINSSGIEKEYALSSHE-----------LNGRLSELLSHIPLEV 72 + G+ ++K I+ + + N + S + ++ Sbjct: 152 IYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNTMRESNLIKLIENKSSKNIYSLLDTDI 211 Query: 73 MATCDRI-ISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEF 131 M I+L E++ L DS Y L H AI R N ++ D + +++ Sbjct: 212 MKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDIEHDRDY 271 Query: 132 QLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM-----REMLQL 186 L + ++K +++P+ EV +I +H+ +++M + EM++ Sbjct: 272 SLAVIIASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMIEA 331 Query: 187 IKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 S +++ L+ H++ R+ +I + L +K +YP ++ ++ Sbjct: 332 YDPDISYILEQDDAFIDGLIAHMQPTLVRLTNGLAIRN---PLLDQIKSDYPDIFKKCKK 388 Query: 247 IAIFIGLQYQRKISPAEIMFLAINI 271 + + + K+ +E FLA++ Sbjct: 389 VTAMLEEKLNLKVPESETGFLAVHF 413 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Query: 47 EKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAI 106 K S+ + + R + L+S + E++ D IS E+ D+ L H Q + Sbjct: 304 SKMQNTSNSKSSKRNNTLVSLV-YEMIEAYDPDISYILEQ----DDAFIDGLIAHMQPTL 358 Query: 107 KRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM 166 R + + NPLL I+ YP F+ ++ +++++L +++P+ E GF+A+H +A + Sbjct: 359 VRLTNGLAIRNPLLDQIKSDYPDIFKKCKKVTAMLEEKLNLKVPESETGFLAVHFGAAVV 418 Query: 167 SGNMEDVAGVT 177 +++ T Sbjct: 419 RLEQNNLSKRT 429 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 202 YQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISP 261 Y LV H+ RI+ + I D L + ++ + + + A IA + ++ +I Sbjct: 235 YAGLVIHITIAINRIMHNEIIE-PDSRLDEDIEHD--RDYSLAVIIASSLEKEFDIEIPE 291 Query: 262 AEIMFLAINIERVRKEH 278 E+ ++ ++I + ++ Sbjct: 292 IEVTYICLHIRASKMQN 308 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 91/255 (35%), Gaps = 19/255 (7%) Query: 34 QKRAGERINSSGIEKEYALS--SHELNGRLSELLSH--IPLEVMATCDRIISLAQERLGK 89 +++ G I +K ALS S + P E+ + L + Sbjct: 148 KQKVGVLIEGKERDKRAALSKLSQLTGEAGQAFIKDRFAPHELDIVTRELKQLELDAQLA 207 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 D + +L H I+R + + + EF+ + +++ V+ Sbjct: 208 FTDEAFDNLLIHTLLMIRRTKLKQPITFSEQEKVFVRGKPEFRWTGAFIRKLERFFAVRF 267 Query: 150 PKDEVGFIAMHLVSAQMSG------------NMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 P+DEV ++ H++ ++ + A V L +++ + +++ + Sbjct: 268 PEDEVAYLTAHILGGKIRSRARIETAEPGADPSAETAEVRGLAETLVRKMSALTWMDFGQ 327 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 + + L HL R+ ++++ + Q +K+ YP + + Y Sbjct: 328 DEALMEGLRIHLYSTLNRLSYGLTVSN---PMLQDIKRMYPYMFDMVIYATRELSEGYPF 384 Query: 258 KISPAEIMFLAINIE 272 I E+ +L ++ + Sbjct: 385 TIPEEEVAYLTLHFQ 399 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 37/74 (50%) Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 +++ L H + R + + NP+L DI+R+YP F + A + + +P Sbjct: 328 DEALMEGLRIHLYSTLNRLSYGLTVSNPMLQDIKRMYPYMFDMVIYATRELSEGYPFTIP 387 Query: 151 KDEVGFIAMHLVSA 164 ++EV ++ +H +A Sbjct: 388 EEEVAYLTLHFQAA 401 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 101/256 (39%), Gaps = 23/256 (8%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMA----------TCDRII 80 + F ++ G + I+K + + + ++L+ + + A D I Sbjct: 142 LSFHRKKGYFSSGEEIQKRKLMIRY-----IHQILAAMDDQHFAAELSAECQWPIFDWIC 196 Query: 81 SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTI 140 + + +L + +R+ + + +E+Q+ + + Sbjct: 197 QFESTFSIRYTGEVIQTLPIYLALFQRRWARGKFVQMDEQEKEVLRSMREYQIADHLVRR 256 Query: 141 IDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-----VTQLMREMLQLIKFQFSLNY 195 I+ + +P DEV ++ HL+S +++ + + + +++R M+ + + + Sbjct: 257 IENVSQISIPDDEVCYLTTHLLSFRVADDKQMDQNDDITTLKRIIRHMVDDFQTYACVQF 316 Query: 196 QEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQY 255 + + L+ H+K +R+ + + L ++VK NY + +++ + Sbjct: 317 KRREELEKNLLVHMKPAYYRLKYGFHLQND---LTESVKANYQDLFTLTKKVVHHLESVV 373 Query: 256 QRKISPAEIMFLAINI 271 + +S EI ++A++ Sbjct: 374 GQPVSDDEIAYIAMHF 389 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 34/80 (42%) Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPK 151 + + +L H + A R + L N L ++ Y F L ++ + ++ +G + Sbjct: 320 EELEKNLLVHMKPAYYRLKYGFHLQNDLTESVKANYQDLFTLTKKVVHHLESVVGQPVSD 379 Query: 152 DEVGFIAMHLVSAQMSGNME 171 DE+ +IAMH + Sbjct: 380 DEIAYIAMHFGGWLDREGVS 399 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 104/235 (44%), Gaps = 16/235 (6%) Query: 55 HELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL 114 H + L LL+ + + + + RL L +S Y +L H A++R ++ + Sbjct: 191 HTRDQNLYALLATDTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLAIAVERVKKGAI 250 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 + + E+ L + I++ + +P E+ +I +HL+ ++M+ + + Sbjct: 251 VEEDPGLVNKLGTWDEYALAGKIRGEIEREFSIHMPDQELSYILLHLLGSKMAYHETEAE 310 Query: 175 G---------VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS 225 + +++ M+ + + + + + + L+ HL+ +R+ E SI + Sbjct: 311 NRQFLFPEEDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAMFRMSEKMSIYN- 369 Query: 226 DESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI----ERVRK 276 + +K+ YP+ + + R A I + ++S EI FL+++ ERVRK Sbjct: 370 --PVLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHFGAAVERVRK 422 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 1/118 (0%) Query: 47 EKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAI 106 K + N + LE++ K + L H Q A+ Sbjct: 300 SKMAYHETEAENRQFL-FPEEDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAM 358 Query: 107 KRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 R + + + NP+L +I+R YP+ + A +I ++ DE+GF++MH +A Sbjct: 359 FRMSEKMSIYNPVLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHFGAA 416 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 90/230 (39%), Gaps = 15/230 (6%) Query: 51 ALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQ 110 + N + L I +V+ + E L ++ YI L H AI+R Sbjct: 195 YFQNLGKNSNMDLLNEEILDKVIKILKKCED---EFLSRITRHSYIGLVIHLVIAIERLL 251 Query: 111 QNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM 170 + ++ +E ++ +++P+ E ++ MHL A+M + Sbjct: 252 SGKTITMEEELLRALKEDPYYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKYAV 311 Query: 171 EDVAGVTQLMRE---------MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS 221 E +T+++ E ++ ++ ++ + YQ L +HL+ R+ H Sbjct: 312 EKQDELTKMLDEYDCMIVADDLIAAFGRLMGDDFSQDKVLYQGLASHLRATLHRLNYHMR 371 Query: 222 INDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + + L +K+++ + + + + +Y +++ EI +L+ + Sbjct: 372 LEN---PLLDQIKEDFRDIFAICKSVCKVMETKYHLEVNEDEIAYLSFHF 418 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 62/151 (41%), Gaps = 13/151 (8%) Query: 129 KEFQLGEEALTIIDKRL------GVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 +E + ++++L Q + E + + S + + + Sbjct: 159 EEENFRSAIIDFLNEKLMRADVEQFQDSRGEFRALEYFQNLGKNSNMDLLNEEILDKVIK 218 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN-YPQAW 241 +L+ + +F S Y LV HL R+L +I +E L +A+K++ Y + Sbjct: 219 ILKKCEDEFLSRITRHS--YIGLVIHLVIAIERLLSGKTIT-MEEELLRALKEDPY---Y 272 Query: 242 QCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 + A+ + + ++ ++ +E ++ ++++ Sbjct: 273 KKAKELTAYFEEEFHIEVPESESAYVFMHLK 303 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 4/123 (3%) Query: 59 GRLSELLSHIPLEVMATCDRIISLAQERLG----KLQDSIYISLTDHCQFAIKRFQQNVL 114 + EL + + A RL +Y L H + + R ++ Sbjct: 312 EKQDELTKMLDEYDCMIVADDLIAAFGRLMGDDFSQDKVLYQGLASHLRATLHRLNYHMR 371 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 L NPLL I+ + F + + +++ + +++ +DE+ +++ H +A + Sbjct: 372 LENPLLDQIKEDFRDIFAICKSVCKVMETKYHLEVNEDEIAYLSFHFGAAIERKKAQIKQ 431 Query: 175 GVT 177 V Sbjct: 432 SVI 434 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 112/252 (44%), Gaps = 19/252 (7%) Query: 39 ERINSSGIEKEYA--LSSHELNGRLSE-LLSHIPLEVMATCDRII-SLAQERLGKLQDSI 94 E + S + + + L E +SE LL I LE++ ++ ++ + + D Sbjct: 167 EHLTESKMYRMLSEPLDDWEQTDAISERLLHLINLELVRNIQEVLADFRKQMVEPMADRA 226 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 YI L H AI+R +Q + + + KEF+L + ++++LG+ +P+ EV Sbjct: 227 YIGLIVHLTLAIERIRQGEKIEIDPSYLSKLKMDKEFELAADLARRLEQKLGMNIPEAEV 286 Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQLM-----REMLQLIKFQFSLNYQEESLSYQRLVTHL 209 G++ MH+ A+ E + + + ++ ++ + + ++ +Q LV HL Sbjct: 287 GYMTMHIRGAKAHIETESLLEESNFQLGVRVKALIHEVEKSLHVQF-QDPSLFQGLVAHL 345 Query: 210 KFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 K +RI E I + L + +KQ+Y + + + + I E FL + Sbjct: 346 KPALYRIREKMKIYN---PLLEKIKQDYEELFHVVQVKGNKVFE--PITIPEEEAGFLVM 400 Query: 270 NI----ERVRKE 277 + ER++++ Sbjct: 401 HFGSALERLKRK 412 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 91/278 (32%), Gaps = 42/278 (15%) Query: 15 VVIDDQQREKVVMGRGIGFQK-RAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 + D + E ++ G+ K AG I+ E+ +L L + L Sbjct: 37 IQRDLKGIEDILAEYGLKLNKSSAGLVISGGPSEQ----------EKLLGFLQTLELNEF 86 Query: 74 ATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQL 133 +R + L L + +L D + + N L L +L Sbjct: 87 TPEERQMLLLAILLQHREPLKLFTLADELNVTVA------TISNDLTRAEAWLNGFRLEL 140 Query: 134 GEE---ALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQ 190 + + II + ++ + +A HL ++M + + + + + + Sbjct: 141 VRKRGYGVQIIGRESDIR--RAISQLLAEHLTESKMYRMLSEPLDDWEQTDAISERLLHL 198 Query: 191 FSLNYQEE-----------------SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 +L +Y L+ HL RI + I D S + Sbjct: 199 INLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIE-IDPSYLSKL 257 Query: 234 KQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 K + + ++ A +A + + I AE+ ++ ++I Sbjct: 258 KMD--KEFELAADLARRLEQKLGMNIPEAEVGYMTMHI 293 Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 63/154 (40%), Gaps = 5/154 (3%) Query: 34 QKRAGERINSSGI-EKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLG--KL 90 +++ G I + + + + + LL ++ +I ++ L Sbjct: 274 EQKLGMNIPEAEVGYMTMHIRGAKAHIETESLLEESNFQLGVRVKALIHEVEKSLHVQFQ 333 Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 S++ L H + A+ R ++ + + NPLL I++ Y + F + + + + + +P Sbjct: 334 DPSLFQGLVAHLKPALYRIREKMKIYNPLLEKIKQDYEELFHVVQVKGNKVFEP--ITIP 391 Query: 151 KDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREML 184 ++E GF+ MH SA + V + + Sbjct: 392 EEEAGFLVMHFGSALERLKRKRTLKVLVVCSSGI 425 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 17/256 (6%) Query: 36 RAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRII-SLAQERLGKLQDSI 94 + G R+ ++ Y ++ H + + + +P E I+ S + L + Sbjct: 152 KYGLRLTGEEMKLRYCMAEH-VFQKAHANSTLLPEETYQFIQGIVRSRTKASGLYLSEIG 210 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV 154 +L H A KR ++ ++ P + FQ+ ++ I LG++ P E+ Sbjct: 211 LSNLVTHIAIACKRIEEKKIVMMPETELKEIQVQPVFQVAQQMAEDIRHVLGIEFPLSEM 270 Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQLMRE--------MLQLIKFQFSLNYQEESLSYQRLV 206 +IA+HL+ A+M + + L+ E +L ++ SLN Q + L Sbjct: 271 AYIAIHLMGAKMMAYGDAGHTLFHLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVGLS 330 Query: 207 THLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMF 266 HL+ R +I + +K++YP A++ + ++ + +I EI + Sbjct: 331 LHLRSAIHRFRYGMNIRN---PYLTDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGY 387 Query: 267 LAIN----IERVRKEH 278 LA++ IER + +H Sbjct: 388 LALHIGAAIERTKSQH 403 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 53/115 (46%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L LL + + + + + L+ H + AI RF+ + + NP L Sbjct: 292 LFHLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYL 351 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 DI+R YP F+ G + ++ G+++ +DE+G++A+H+ +A + V Sbjct: 352 TDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHIGAAIERTKSQHVKK 406 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 92/222 (41%), Gaps = 14/222 (6%) Query: 61 LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 L +L ++ + + + + D +ISL H +I+R + + Sbjct: 191 LMQLRELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVKLSKA 250 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVT--- 177 E+ + ++ I+ + V LP+ E+G+I +H++ +M N + + Sbjct: 251 VLNNLKQKDEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIEDVNLELED 310 Query: 178 --------QLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + +E++ + + SL+ + L+ HL+ R+ ++ + L Sbjct: 311 EESIELAVIMSKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRN---PL 367 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 +K+NYP+ + A ++ +K++ EI ++A+++ Sbjct: 368 LNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHL 409 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Query: 55 HELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL 114 + EL + E++ +R +SL +L L H + I R + + Sbjct: 307 ELEDEESIELAVIMSKEIINIAERALSLDLSNDKQL----LNGLILHLRPTINRLKYGLT 362 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 L NPLL DI+ YP+ + + + +K LG ++ ++E+G+IA+HL +A Sbjct: 363 LRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAA 412 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 99/269 (36%), Gaps = 17/269 (6%) Query: 12 NVVVVIDDQQREKVVMGRGIGFQKRA--GERINSSGIEKEYALSSHELNGRLSELLSHIP 69 N + D ++ E+ V +G+ K+ G + +K + + + E S Sbjct: 31 NKTIRNDLKKAEEFVQQKGVKIIKKPRVGIVLEGPRNKKLELVDEIKKSLDFEEPFSPEA 90 Query: 70 LEVMATCDRIISLAQERLGKLQDSIYIS-LTDHCQF-AIKRFQQNVLLP-----NPLLWD 122 + +S +L + +Y+S +T H +++++ L N + Sbjct: 91 RKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEKWLNKFNLKLLKKPNYGIEV 150 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE 182 + + ++ +++ + ++ + + E + + + Sbjct: 151 VGDEENWRNAVASLIVSTKEQKELKEFLYND---YTGRIDYRTLMQLRELFDIDYKQLEK 207 Query: 183 MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQ 242 ++ + + + +E ++ LV H+ R+ + +++ +KQ + Sbjct: 208 IVSNAESKLKFRFSDE--AFISLVIHVAISIERLKHKKDVK-LSKAVLNNLKQK--DEYV 262 Query: 243 CAERIAIFIGLQYQRKISPAEIMFLAINI 271 A+++A I ++ + +EI ++ ++I Sbjct: 263 IAQQMAKEIEAKFNVVLPESEIGYIVLHI 291 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 102/259 (39%), Gaps = 13/259 (5%) Query: 23 EKVVMGRGIGFQKRAGERINSSGIEKE----YALSSHELNGRLSELLSHIPLEVMATCDR 78 E + + F ++ G + +K + + L S + + Sbjct: 135 EWQLFQLELAFHRKQGYFVIGEEKQKRKAIVHYAAQILATVGYERLCSELLGGHILPVKN 194 Query: 79 IISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEA 137 II ++ + + + +LT + +KR+ + + +E++ Sbjct: 195 IIRQSETFSAIRYTNDVIHTLTVYLSIFLKRWIRGKYIQMDEQEKEVLQSTREYKTAHHI 254 Query: 138 LTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG-----VTQLMREMLQLIKFQFS 192 +T I+ V +P+DE+ ++ +L+ ++++ + + + Q+++ M+ + Sbjct: 255 ITQIENVFQVDVPQDEICYLTTYLLGSRVTDDKQIDQNNEIATLKQIIKNMVDDFQKYAC 314 Query: 193 LNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIG 252 + ++ + L+ H+K +R+ + + L Q+VK NY + +++ + Sbjct: 315 VQFKHREELEKNLLIHMKPAYYRLKYGLHLQN---ELTQSVKANYHDIFTLTKKVVHHVE 371 Query: 253 LQYQRKISPAEIMFLAINI 271 + + EI ++A++ Sbjct: 372 NVVGQSVGDDEIAYIAMHF 390 >UniRef50_B7GN87 Transcriptional antiterminator, BglG n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GN87_BIFLI Length = 192 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%) Query: 3 MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62 M+I ++ NNNVV+ D + RE ++ GRG+GF+ + G ++ + + + + + ++ Sbjct: 1 MEILRVFNNNVVLAKD-RGREVILTGRGLGFKAKPGMTVDDAKVARVFVPAQGRDPDHMA 59 Query: 63 ELLSHIPLEVMATCDRIISLAQ-ERLGKLQDSIYISLTDHCQFAIKRFQQNV-LLPNPLL 120 +LL IP E++ + ++ I+L DH A++R + + +P PL Sbjct: 60 QLLGDIPPEIIRLISETMDGIGLSSEAAQSSTLVIALADHVCGALRRAKNGIPPVPYPLN 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I+ LY +E+Q G L +++RL L E A+H V+A + V Q Sbjct: 120 SEIRSLYEREYQQGCALLAALNRRLDDALDPSESVAFALHFVNAGVRMFFWTVRRPVQDF 179 Query: 181 REM 183 + Sbjct: 180 CGI 182 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 7/120 (5%) Query: 157 IAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQF-SLNYQEE----SLSYQRLVTHLKF 211 +A V AQ + + E+++LI + E S L H+ Sbjct: 43 VARVFVPAQGRDPDHMAQLLGDIPPEIIRLISETMDGIGLSSEAAQSSTLVIALADHVCG 102 Query: 212 LSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 R L ++ Y + +Q + + + + P+E + A++ Sbjct: 103 ALRRAKNGIPPV--PYPLNSEIRSLYEREYQQGCALLAALNRRLDDALDPSESVAFALHF 160 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 94/232 (40%), Gaps = 15/232 (6%) Query: 58 NGRLSELLSHIPLEVMATCDRII---SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVL 114 + + ++ + L+ + D I ++ KL D + +L H ++R + Sbjct: 179 DDSMYAIVDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYP 238 Query: 115 LPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA 174 L + R E+Q+ L +++ +G++ PK+E +IA+HL Sbjct: 239 LAFFSIPAAIRQ-SDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVDGSPQDN 297 Query: 175 G----VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 + ++ + ++ + +S Q L+ H+K L+ R+ H + + L Sbjct: 298 KADDLLRSHLKAGIVKASQLTGMSLEADSSLLQGLLAHMKPLATRLENHIQLTN---PLT 354 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN----IERVRKEH 278 + +K YP+A+ ++ I +S E +++++ IER H Sbjct: 355 EEIKSKYPEAFALTKQAFENIPELQAYDLSDDEWAYISLHVMAAIERYSNRH 406 Score = 60.7 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 5/144 (3%) Query: 30 GIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGK 89 GI F K I K S + N + + S + Sbjct: 269 GIRFPKEEANYIALHLKVKHSVDGSPQDNK-----ADDLLRSHLKAGIVKASQLTGMSLE 323 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 S+ L H + R + ++ L NPL +I+ YP+ F L ++A I + L Sbjct: 324 ADSSLLQGLLAHMKPLATRLENHIQLTNPLTEEIKSKYPEAFALTKQAFENIPELQAYDL 383 Query: 150 PKDEVGFIAMHLVSAQMSGNMEDV 173 DE +I++H+++A + Sbjct: 384 SDDEWAYISLHVMAAIERYSNRHK 407 >UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebacterium glucuronolyticum RepID=C2GFH3_9CORY Length = 333 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 50/310 (16%) Query: 4 QITKILNNNVVVVIDDQQR-----------------------------EKVVMGRGIGFQ 34 +I ++L+NN V+V +V++GRGIGFQ Sbjct: 27 RIIRVLSNNAVLVRVPSGVPGEDTAQRAQNTAQNTNTNNTNNTQPTQDTQVLVGRGIGFQ 86 Query: 35 KRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSI 94 ++ G+ I+ + +++Y S E L +LS + VM T + LA + LG+L S+ Sbjct: 87 RKPGDEISPATADRQYLELSPERAQFLKGVLS-LDPAVMETISAAVDLAVDLLGELHPSV 145 Query: 95 YISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRL-GVQLPKDE 153 Y+ L +H FA++R + N L+ +I+ +P EFQ + ++ I+ LP DE Sbjct: 146 YVVLAEHISFAVQRAGSGEQIRNSLVDEIRAAFPLEFQAAQLMVSYINSHTANATLPVDE 205 Query: 154 VGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTH-LKFL 212 FIA+HL +A+ ++ V + +L+ + + + V H L Sbjct: 206 AAFIALHLNAARQGVTVKQPLAVANELAGLLRFVCARLGATTTT----FDGTVDHSLALE 261 Query: 213 SWRILEHASINDSDESL-QQAVKQNYPQAWQCAERIAIFIGLQYQRKIS------PAEIM 265 R+ +L +++++++ P + A+++ + + E Sbjct: 262 LTRMSNRVGSKQFRSNLARRSIERDLPSEFDVAQQVLCRM-----IDVPTLPSHAAGEAA 316 Query: 266 FLA--INIER 273 +LA ++ R Sbjct: 317 YLAVFLHGWR 326 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 119/301 (39%), Gaps = 33/301 (10%) Query: 8 ILNNNVVVVID-----------DQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHE 56 +LNN+ + + G+ F++ I S EKE Sbjct: 132 VLNNDFALASKWLERFDIELVRKPGLGVYLKGQEKNFREAYVNLIYDSFNEKEILDMVRN 191 Query: 57 LNGRL-----------SELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQF 104 ++ + + LL+ + ++ + ++ L L DS YI L H Sbjct: 192 ISENIQTDKAIEILSENRLLNLMDRCIIRKVEATLTKKLSDLDVNLADSAYIGLVVHISL 251 Query: 105 AIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 A++R + + + + +EF+L +E + ++ + +P DEVG+I MH+ A Sbjct: 252 ALQRIKNGENITMDKEFLKELSITEEFKLAKEIVKGMETDFNMDIPVDEVGYITMHIRGA 311 Query: 165 QMSGNME------DVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE 218 + + D + ++ +M+ L + +F ++ + + ++ L HL R+ Sbjct: 312 KQRSSSNHKALNLDDIEIMEITNKMIDLAEDEFKISLKNDERLFKDLANHLGPSINRLNM 371 Query: 219 HASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR-KISPAEIMFLAINIERVRKE 277 I + L +K Y A+ E+I+ I + I +EI ++A++ ++ Sbjct: 372 GLEIRN---PLLDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIGYIAMHFASAIEK 428 Query: 278 H 278 + Sbjct: 429 N 429 Score = 69.9 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 4/139 (2%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKL---QDSIYI 96 ++ G + + + + + L+ +E+M +++I LA++ + ++ Sbjct: 297 PVDEVGYITMHIRGAKQRSSSNHKALNLDDIEIMEITNKMIDLAEDEFKISLKNDERLFK 356 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGV-QLPKDEVG 155 L +H +I R + + NPLL +I+ Y + E+ II +L + +P+ E+G Sbjct: 357 DLANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIG 416 Query: 156 FIAMHLVSAQMSGNMEDVA 174 +IAMH SA M + Sbjct: 417 YIAMHFASAIEKNLMMNTN 435 >UniRef50_C2BY17 Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BY17_LISGR Length = 249 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 135/246 (54%), Gaps = 7/246 (2%) Query: 4 QITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSE 63 + + LNNN+ +V + E +V+G+GI F K+ G+ I+ + + + + + + ++ E Sbjct: 5 ILKQPLNNNIAMVSQE-GEELIVIGKGISFGKKIGDEIDINKVSRVFKAQNELASTQIEE 63 Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 +++ +P + ++I +L + + I +SL DH QFA++ QQ + +PL W+ Sbjct: 64 VIAAVPEFYLKIAEKIAALGEAATRQQFNFGIILSLADHIQFAVECAQQEYRIKSPLQWE 123 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA-QMSGNMEDVAGVTQLMR 181 ++ L+P E + G EA+ I+ ++ LP ++ IA+H V+A + + +++ ++ ++R Sbjct: 124 MKTLFPLEVRAGYEAIDYINTQIDADLPSEDAYAIALHFVNANKGNLLIKETEKLSLIVR 183 Query: 182 EMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE----HASINDSDESLQQAVKQNY 237 +++ LI +++ ES+ Y R VTHLK+ +R+LE S + L Q + +NY Sbjct: 184 DIIDLINGFYNIQINRESIDYIRFVTHLKYYLYRMLESRQVGKSEESEIDMLTQLISENY 243 Query: 238 PQAWQC 243 C Sbjct: 244 RDTLIC 249 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 99/247 (40%), Gaps = 14/247 (5%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLT 99 I + Y L S +LL I L V+ + + + D Y+ L Sbjct: 172 EEELVSILESYRLKSELGEQASEKLLYLIDLNVILKVLETLHELRRDGEPIADVSYVGLA 231 Query: 100 DHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAM 159 H A+ R ++ + + L E++ + + +++ + +P+ EV ++AM Sbjct: 232 VHLSLAVDRIKRGEKIEKHSEGFEKVLKTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAM 291 Query: 160 HLVSAQMSGN-----MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSW 214 HL+ A+ + E + +++++ + + + + + L++HLK + Sbjct: 292 HLLGAKQGDDGSFFFQETSLDIAMRAKKLIEAVGVRTEVALINDHSLLEGLISHLKPALF 351 Query: 215 RILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAIN---- 270 R+ + I + S+ A+K+ Y + + + I EI +L ++ Sbjct: 352 RMEQGMKIYN---SMLPAIKEGYAPLFNTIKECVVEIFPT--WSFPDEEIGYLVMHFGSA 406 Query: 271 IERVRKE 277 IER +K+ Sbjct: 407 IERSKKK 413 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 7/152 (4%) Query: 64 LLSHIPLEVMATCDRIISLA--QERLGKLQDS-IYISLTDHCQFAIKRFQQNVLLPNPLL 120 L++ ++I + + + D + L H + A+ R +Q + + N +L Sbjct: 305 FFQETSLDIAMRAKKLIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQGMKIYNSML 364 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 I+ Y F +E + I P +E+G++ MH SA + V + Sbjct: 365 PAIKEGYAPLFNTIKECVVEIFPTW--SFPDEEIGYLVMHFGSAIERSKKKAVIKAIVIC 422 Query: 181 REMLQLIKFQFSLNYQEESLSYQRLVTHLKFL 212 + + ++E Q +TH+ Sbjct: 423 SSGI-GTSKLLATRLEKEIPEIQG-ITHMSAF 452 >UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7R7_9FIRM Length = 201 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 73/183 (39%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Query: 14 VVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVM 73 V +D+ E ++MGRGI +QK GE + IEK++ L + + N R EL+ IP+ V+ Sbjct: 19 VSSLDENHNEIILMGRGIAYQKSRGEVVLDEMIEKQFYLKNDKQNNRFLELIKDIPVNVL 78 Query: 74 ATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQ 132 D II A++ L +L D IYI+LTDH +AI+R+ Q + + NPLLW+I++ Y +E++ Sbjct: 79 NVTDEIIDFARKGLDKELNDGIYITLTDHINYAIERYLQGINVQNPLLWEIRQFYQEEYK 138 Query: 133 LGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFS 192 + EAL II+++L V L +DEVGFIA+H V+A+++ ME+V +T++++E+L ++++ Sbjct: 139 IAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEMEEVTQITKIIQEILNIVRYHLM 198 Query: 193 LNY 195 Sbjct: 199 RIL 201 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 5/102 (4%) Query: 170 MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + V + E++ + + Y L H+ + R L+ ++ + L Sbjct: 71 KDIPVNVLNVTDEIIDFARKGLDKELND--GIYITLTDHINYAIERYLQGINVQN---PL 125 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 ++Q Y + ++ A I + +S E+ F+A++ Sbjct: 126 LWEIRQFYQEEYKIAAEALKIINQKLMVNLSEDEVGFIALHF 167 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 121/297 (40%), Gaps = 32/297 (10%) Query: 2 NMQITK-ILNNNVVVVIDDQQREKVVMGRGIGFQ-------KRAGERINSSGIEKEYALS 53 NM +++ +NN D ++ K++ G I Q K G+ N + L Sbjct: 117 NMFVSRGTINN------DLKEVRKLLEGNNIKLQSEKSKGIKAIGDEKNLRKVVSNLMLE 170 Query: 54 SHELNG----RLSELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKR 108 + + +L + +E + +I A+++L L D + +L H AIKR Sbjct: 171 NVADSDLIGVNFKKLFKDMDIEFI---GNVIKTAEDQLESTLSDYSFNNLLIHIAIAIKR 227 Query: 109 FQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSG 168 + + EF + +++ R +++PK E+G++ +HL+ + + Sbjct: 228 IELAKDIVMDDNELKNLSKTCEFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNVML 287 Query: 169 NMEDVAG---VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDS 225 E + + ++ + + N++ + + L+ H++ + +R+ SIN+ Sbjct: 288 KEEKNDDLVYIQLISATLISEVGKRTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSINN- 346 Query: 226 DESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI----ERVRKEH 278 L + Y + + E IF+ +IS EI ++ ++ ER++ + Sbjct: 347 --PLLDEIIYKYKEVFTLVEESLIFLEKDLNAEISKEEIGYITLHFMASLERIKNLN 401 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 45/91 (49%) Query: 85 ERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKR 144 + + + + L H + I R + V + NPLL +I Y + F L EE+L ++K Sbjct: 314 KYNFEADEHLLEGLIQHIRPMIYRLKHGVSINNPLLDEIIYKYKEVFTLVEESLIFLEKD 373 Query: 145 LGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 L ++ K+E+G+I +H +++ + Sbjct: 374 LNAEISKEEIGYITLHFMASLERIKNLNKIK 404 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 112/266 (42%), Gaps = 28/266 (10%) Query: 31 IGFQKRAGERINSSGIEKE----YALSSHELNGRLSELLSHI--------------PLEV 72 + F+++ G I+ +K Y LS LS I +E Sbjct: 142 LEFERKDGYTISGDETDKRKALVYYLSQALPQQNWETELSPIRIFLRTKRDNGRIFTIEE 201 Query: 73 MATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEF 131 + +IS +++ L + D + SL+ +KR + + L KE+ Sbjct: 202 LQKVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKGKFIKVHPLEKQVLKGTKEY 261 Query: 132 QLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS------GNMEDVAGVTQLMREMLQ 185 + + +++ GV P +EV ++ H++S++++ + ++ +T ++ M+ Sbjct: 262 EAAKVMSFKLEQAFGVHYPDEEVLYLTTHILSSKINYANGEIESRKESQELTHIVTSMVN 321 Query: 186 LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAE 245 + + ++E+ L + L H+K +RI + ++ + +++K +YP+ + Sbjct: 322 DFQKYACVVFEEKELLEKNLFFHIKPAFYRIKYGLEVENN---IAESIKTSYPELFLLTR 378 Query: 246 RIAIFIGLQYQRKISPAEIMFLAINI 271 ++ ++ + ++ E+ F+ ++ Sbjct: 379 KVVHYLERYVGKSVNDNEVAFITMHF 404 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 47 EKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAI 106 K + + + S+ L+HI ++ + + E L+ +++ H + A Sbjct: 294 SKINYANGEIESRKESQELTHIVTSMVNDFQKYACVVFEEKELLEKNLFF----HIKPAF 349 Query: 107 KRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQM 166 R + + + N + I+ YP+ F L + + +++ +G + +EV FI MH V Sbjct: 350 YRIKYGLEVENNIAESIKTSYPELFLLTRKVVHYLERYVGKSVNDNEVAFITMHFVGWMR 409 Query: 167 SG 168 Sbjct: 410 RE 411 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 91/234 (38%), Gaps = 12/234 (5%) Query: 44 SGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLA-QERLGKLQDSIYISLTDHC 102 E + N S LL + LE + I ++ + D +I+L H Sbjct: 170 EEAFYEAVYAGQMQNEVASRLLHFVDLETIRLVQSTIQRVKEKHFDDMADQSFIALVVHA 229 Query: 103 QFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLV 162 AI+R +Q + + +E + + + +P+ E+G++ MHL Sbjct: 230 TLAIERIKQGEQIRMDAGQLEALHKEDSLPVAQELAEALAQTFQITIPEAEIGYLVMHLR 289 Query: 163 SAQMSGNMEDVAGVTQLM-----REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRIL 217 A++ + + ++ + ++ S++ E S +Q L+ HLK +R+ Sbjct: 290 GARIGHIQGEPFEQSNAELAGRLKQFIAGMEQDLSVSLAEPS-LFQGLLAHLKPALYRVR 348 Query: 218 EHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + I++ L + VK +Y + + A K+ AEI FL ++ Sbjct: 349 QGMKIHN---PLLEKVKADYAALFAVTAKQAS--KAFAPLKLPEAEIGFLTLHF 397 Score = 53.8 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 92 DSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQL-GEEALTIIDKRLGVQLP 150 S++ L H + A+ R +Q + + NPLL ++ Y F + ++A ++LP Sbjct: 330 PSLFQGLLAHLKPALYRVRQGMKIHNPLLEKVKADYAALFAVTAKQASKAFA---PLKLP 386 Query: 151 KDEVGFIAMHLVSAQMSGNMEDV 173 + E+GF+ +H +A Sbjct: 387 EAEIGFLTLHFGAALERRKRSVS 409 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 100/265 (37%), Gaps = 15/265 (5%) Query: 23 EKVVMGRGIGFQKRAGERIN-SSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIIS 81 E + + I + + + + + + + L I + Sbjct: 147 ELEITHQHIQIRGKEEDIRHFIMDYFFVTSFDNTLSTMVGNTFLEGINFAEIMIIVLY-- 204 Query: 82 LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTII 141 ++ KL D + +L H ++R + L + I E+Q+ L + Sbjct: 205 ECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLELFSIP-IAIRQSDEYQVALRILYRV 263 Query: 142 DKRLGVQLPKDEVGFIAMHLVSA----QMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQE 197 ++ +G++ PK+E +IA+HL + + + ++ + I + + Sbjct: 264 EEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQLTGMTLET 323 Query: 198 ESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQR 257 ++ +Q L+ H+ L+ R+ H + + L + +K YP+ + ++ + + Sbjct: 324 DTNLFQGLLAHMMPLTTRLENHIQLTN---PLTEEIKSQYPEIFTLTKQTFSDLLVCQNN 380 Query: 258 KISPAEIMFLAIN----IERVRKEH 278 +S E +++++ IER H Sbjct: 381 DVSDDEWAYISLHLMAAIERYSNRH 405 >UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Y8_9BACI Length = 200 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 2/191 (1%) Query: 67 HIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQR 125 ++ + + + I + R L + I+I LTDH FA+KR + + NP L + + Sbjct: 1 YVDEQFVGVMNEFIDKLETRFGANLNEHIHIGLTDHLHFAVKRIENGQGIHNPFLQETEL 60 Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQ 185 YP+EF + E ++G+++P E+GFI +H+ SA + ++ D+ TQ++ E++ Sbjct: 61 AYPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIHSALTNRDLGDINRHTQMVSELVG 120 Query: 186 LIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAE 245 +I+ + ++Y RLV HL RI +++ D L+ +++ YP + A Sbjct: 121 MIEENLKMTIDRRDMNYLRLVRHLHHAIERIQFENYVDNQDA-LKAVLQKEYPVCYNLAW 179 Query: 246 RIAIFIGLQYQ 256 ++ + + Sbjct: 180 KLMKVMQRRLN 190 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 171 EDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQ 230 +M E + ++ +F N E L HL F RI I++ Sbjct: 1 YVDEQFVGVMNEFIDKLETRFGANLNEHIH--IGLTDHLHFAVKRIENGQGIHN---PFL 55 Query: 231 QAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 Q + YPQ + A + + G Q +I P EI F+ ++I Sbjct: 56 QETELAYPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIH 97 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 15/222 (6%) Query: 69 PLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPL---LWDIQR 125 ++ + II L D +L H A+ R + + Sbjct: 191 DQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDM 250 Query: 126 LYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE--- 182 K + + E+ + +K+L + PK E ++A+HL+ +M G+ + + + + Sbjct: 251 KDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSI 310 Query: 183 ------MLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 L+ I+ + L +++ L HLK R +I + + +K+N Sbjct: 311 YKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRN---PMLTHIKKN 367 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH 278 YP A+Q A + I + I EI +LA++I + + Sbjct: 368 YPLAFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERN 409 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 63/145 (43%) Query: 31 IGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKL 90 + F K + + + S++ + + +L +++ I Sbjct: 272 LSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKLIMLSLEKIEEEMHLGISQ 331 Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 + ISL H + A+ R++ + + NP+L I++ YP FQ A +I+++ + + Sbjct: 332 DTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAFQAAVYAGVVIEEKTDITID 391 Query: 151 KDEVGFIAMHLVSAQMSGNMEDVAG 175 ++E+G++A+H+ +A + Sbjct: 392 ENEIGYLALHIGAAMERNKLRKGPK 416 >UniRef50_Q6M215 Transcriptional antiterminator-fragment n=2 Tax=Corynebacterium glutamicum RepID=Q6M215_CORGL Length = 196 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 103/190 (54%), Gaps = 8/190 (4%) Query: 96 ISLTDHCQFAIKRFQQNVLL---PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ---- 148 ++L DH Q A+KR + L PNPL ++ LYP+E +L E L + L + Sbjct: 1 MALADHLQMAVKRNELEPELTSNPNPLSAEVHHLYPEETRLATEILERTNNWLAEKGIPP 60 Query: 149 LPKDEVGFIAMHLVSAQMS-GNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVT 207 LP EV I++HLV+A ++ + +T + ++ ++I F + +S++ R +T Sbjct: 61 LPPAEVVAISLHLVNAGFRTEDLAETYVMTGVFEQLFEVIDSSFGITLDRQSVNAARFIT 120 Query: 208 HLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFL 267 H+++ R+ +ND L+ +++ ++P + CAER++ + L+ ++S E +L Sbjct: 121 HMRYFFVRVHHDGQLNDGMSVLRNSLEISHPDSVACAERLSQILSLRLGAELSSDEQTYL 180 Query: 268 AINIERVRKE 277 A+++ R+ ++ Sbjct: 181 ALHVARLAED 190 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 104/257 (40%), Gaps = 17/257 (6%) Query: 26 VMGRGIGFQKRAGERINSSGIEKEYA----LSSHELNGRLSELLSHIPL-EVMATCDRII 80 ++G +K G I + + + L+ ++ + E++ + Sbjct: 150 LIGPENAKRKIVGNLIVNRLDIQMFLEAVELNIKGKTDSSEKMFGVVSKGELLKMERILF 209 Query: 81 SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTI 140 L ++ L DS YI+L H +AI+R + + + + KE+ E Sbjct: 210 QLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNELEELMNAKEYSSALEIAGE 269 Query: 141 IDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ-----LMREMLQLIKFQFSLNY 195 +++ GV +P+ EVG+I +HL SA E A + + ++ I + ++ Sbjct: 270 LERAFGVTIPEAEVGYITIHLRSANRKYKTEYKAQEIELETALQTKRLIAFISDKIRMDL 329 Query: 196 QEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQY 255 + Y+ L+ HL+ RI E+ I + +++ +K++Y + I + + Sbjct: 330 TKNYSLYEGLIAHLEPAVSRIKENIEIYN---PMKEQIKRDYFLLY---MAIEEGVEKYF 383 Query: 256 -QRKISPAEIMFLAINI 271 S EI F+ ++ Sbjct: 384 PGMSFSDDEIAFIVLHF 400 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 66 SHIPLEVMATCDRIISLAQERLGK---LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 I LE R+I+ +++ S+Y L H + A+ R ++N+ + NP+ Sbjct: 304 QEIELETALQTKRLIAFISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYNPMKEQ 363 Query: 123 IQRLYPKEFQLGEEALTIIDKRL-GVQLPKDEVGFIAMHLVSAQMSGNMEDVAG 175 I+R Y + EE ++K G+ DE+ FI +H SA E Sbjct: 364 IKRDYFLLYMAIEE---GVEKYFPGMSFSDDEIAFIVLHFGSALEIKKEEAKVK 414 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 106/259 (40%), Gaps = 18/259 (6%) Query: 35 KRAGERINSSGIEKEYALSSHELN---GRLSELLSHIPLEVMATCDRII-SLAQERLGKL 90 + GE + +Y L ++ R + +++ L + +I + L Sbjct: 159 RIVGEEFHIRSCLSQYGLPRYDHTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYL 218 Query: 91 QDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP 150 D +L H A+KR + + + + KE+ + ++ + ++K L + P Sbjct: 219 SDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFP 278 Query: 151 KDEVGFIAMHLVSAQMSGNMEDVA-------GVTQLMREMLQLIKFQFSLNYQEESLSYQ 203 K+EV ++ MHL+S ++ + M+ +L + + +L + + Sbjct: 279 KEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVAEERNLIFYYDEELLF 338 Query: 204 RLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAE 263 HLK L R+ ++ L VK+NYP A++ A + IG I +E Sbjct: 339 GFGVHLKTLLNRLKYKL---NTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESE 395 Query: 264 IMFLAINI----ERVRKEH 278 I ++AI+ R+++++ Sbjct: 396 IGYIAIHFGGAMSRLQEQN 414 Score = 67.2 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 50/122 (40%) Query: 54 SHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNV 113 S + + ELL M ++ + + + + H + + R + + Sbjct: 296 SKDRYENVEELLGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKL 355 Query: 114 LLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV 173 NPLL ++++ YP F++ II + G +P+ E+G+IA+H A ++ Sbjct: 356 NTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQ 415 Query: 174 AG 175 Sbjct: 416 KK 417 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 95/242 (39%), Gaps = 12/242 (4%) Query: 38 GERINSSGIEKEYALSSHELNGRLSELLSHI--------PLEVMATCDRIISLAQERLGK 89 G I + + + L + I+ +E K Sbjct: 156 GIWIEGEERNRRHFIMDTFFGNHCGNSLKEYLGQSRFFTDISFEELVIIILDETREAKLK 215 Query: 90 LQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQL 149 + D I +L+ H IKR ++ + L + + E+Q+ + + I+ V Sbjct: 216 VSDFIIQNLSLHLALGIKRLREGFEIKE-LGIEQEVSDRVEYQVAQRIVQRIEVIADVSF 274 Query: 150 PKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHL 209 P++E+ ++ +HL++ ++ +++ + ++L+ + +F + E+ + L+ HL Sbjct: 275 PQEEIAYLTLHLMAKSNHRENKNDQELSKEVVKVLKRLSQEFRFSLIEDHQLFNGLLDHL 334 Query: 210 KFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAI 269 + R+ I + L + +K+ P+ ++ + + I+ E +LA+ Sbjct: 335 SPMMIRLSRGIRIEN---PLTEEIKKENPKVFEAVKTHFSNMPALKNYTINEDEWAYLAL 391 Query: 270 NI 271 ++ Sbjct: 392 HL 393 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 1/128 (0%) Query: 41 INSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTD 100 I + N R ++ + EV+ R+ + L + ++ L D Sbjct: 274 FPQEEIAYLTLHLMAKSNHRENKNDQELSKEVVKVLKRLSQEFRFSLIE-DHQLFNGLLD 332 Query: 101 HCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMH 160 H + R + + + NPL +I++ PK F+ + + + + +DE ++A+H Sbjct: 333 HLSPMMIRLSRGIRIENPLTEEIKKENPKVFEAVKTHFSNMPALKNYTINEDEWAYLALH 392 Query: 161 LVSAQMSG 168 L++A Sbjct: 393 LMAALEKE 400 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 108/272 (39%), Gaps = 23/272 (8%) Query: 15 VVIDDQQREKVVMGRGI------GFQKR-AGERINSSGIEKEYALSSHELNGRLSE---- 63 V D ++ +++ G+ GF + G+ + + L ++E Sbjct: 128 VSSDLKKGRELLARYGMALVSKPGFGLKIEGDELQKRTCYADLLLEEEPALSHITEREQL 187 Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDI 123 I LE + + +++ + ++D +L H AI++ ++N +P Sbjct: 188 HFPDISLETIRSI--VLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPASTTRTQ 245 Query: 124 QRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREM 183 + P ++ ++ + + V L +DE ++ MHL++ Q ++ + + Sbjct: 246 RS--PVLVRIAQKIIHQVSDTFHVTLSEDETDYLVMHLLANQTWKEAAQHQTTVEVQQAV 303 Query: 184 ---LQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA 240 LQ I+ + ++++ Q L+ H+K L RI S+ + L +K +YP Sbjct: 304 AVFLQHIEKMSGHRFADDNILQQDLMLHMKPLLNRIQYGVSLQN---PLLHEIKTSYPYP 360 Query: 241 WQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 + A + R + E ++A++I Sbjct: 361 FDLAVSGLNALQ--LVRTPNEDEAAYVALHIA 390 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 2/134 (1%) Query: 42 NSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDH 101 + + + L++ + + +A + I + + L H Sbjct: 272 DETDYLVMHLLANQTWKEAAQHQTTVEVQQAVAVFLQHIEKMSGHRFADDNILQQDLMLH 331 Query: 102 CQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHL 161 + + R Q V L NPLL +I+ YP F L L + +L +DE ++A+H+ Sbjct: 332 MKPLLNRIQYGVSLQNPLLHEIKTSYPYPFDLAVSGLNAL--QLVRTPNEDEAAYVALHI 389 Query: 162 VSAQMSGNMEDVAG 175 ++ ++ Sbjct: 390 AASFERSQLDTSQK 403 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 82/215 (38%), Gaps = 10/215 (4%) Query: 64 LLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWD 122 L + + R+IS ++ L L D + LT ++R Q + Sbjct: 186 LFPPMEEGGLEQVYRLISDSEITLGVDLTDEMLFHLTARFLLYVRRIQTAQWVSIDDDER 245 Query: 123 IQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV------AGV 176 E++ + + GV +P DEV + AMHL+ A+++ + + Sbjct: 246 SVLRRTPEYEAAARIAEGLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQMTGSEEVLKQL 305 Query: 177 TQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQN 236 + EM + + + L+ HLK +RIL S+ + L + ++ Sbjct: 306 RNVTTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLSLEN---PLLENIRSK 362 Query: 237 YPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 Y + ++ R A RK+ EI +LA++ Sbjct: 363 YGEVFELTRRSAAPFEQLVGRKLDDHEIGYLAMHF 397 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 5/147 (3%) Query: 32 GFQKRAGERINSSGIEKEYALSSHELNGRLSELL--SHIPLEVMATCDRIISLAQERLGK 89 G + G + + R+ ++ + ++ + Q Sbjct: 263 GLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQMTGSEEVLKQLRNVTTEMTDHFQRYACV 322 Query: 90 LQDS---IYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLG 146 + + +L H + A R + L NPLL +I+ Y + F+L + ++ +G Sbjct: 323 FLPNREAMEENLLVHLKPAYYRILYGLSLENPLLENIRSKYGEVFELTRRSAAPFEQLVG 382 Query: 147 VQLPKDEVGFIAMHLVSAQMSGNMEDV 173 +L E+G++AMH N + Sbjct: 383 RKLDDHEIGYLAMHFGGWLRRENTKPA 409 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 91/241 (37%), Gaps = 8/241 (3%) Query: 37 AGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYI 96 GE + + + E + II L S Sbjct: 150 IGEEDHYRKAYAHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAID 209 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGF 156 L H AI+R +N P+ + + ++ + + + +++ V P+ E+ F Sbjct: 210 GLIYHILIAIQRLNENFSFDIPINEIDKWRHTNQYAIASKMIENLERSCNVTFPESEIIF 269 Query: 157 IAMHLVSAQMSGN-----MEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKF 211 I +HL+ ++M+ + + ++Q + E++ + + ++ +++ + L+TH+K Sbjct: 270 ITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKP 329 Query: 212 LSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 RI + L+Q V + YPQ + + I + + E+ ++ I+ Sbjct: 330 AIHRIKYDMLQPN---PLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHF 386 Query: 272 E 272 Sbjct: 387 A 387 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 12/115 (10%) Query: 50 YALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRF 109 H+L+ + EL++ + E+ I +++ + ++ SL H + AI R Sbjct: 287 ITFEYHDLSQNIHELITCVSQEL------GIDMSK------DNKLHTSLITHIKPAIHRI 334 Query: 110 QQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA 164 + ++L PNPL ++ R YP+ + + ++ I++ ++ +DE+ +I +H S+ Sbjct: 335 KYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASS 389 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 86/209 (41%), Gaps = 8/209 (3%) Query: 68 IPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 E + IS ++ L K DS Y+SL H A+KR ++ + Q Sbjct: 208 FDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKILMSDEQLEQLK 267 Query: 127 YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM-EDVAGVTQLMREMLQ 185 E+ + + ++ + +P +E+G+I +HL+ A+ + D + +++ +++ Sbjct: 268 NEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMGARRFFILANDDKELREVVIKIID 327 Query: 186 LIKFQFSLNYQEE--SLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQC 243 ++ + + + + L HLK R+ I + + +K Y + Sbjct: 328 NVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIEN---PILGTIKGKYMDIFSA 384 Query: 244 AERIAIFIGLQYQRK-ISPAEIMFLAINI 271 E+ I +Y + I EI ++ ++I Sbjct: 385 VEKSCFIIKEKYYIENIPDDEIAYITMHI 413 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 6/120 (5%) Query: 64 LLSHIPLEVMATCDRIISLAQERLGKLQDSIYIS-----LTDHCQFAIKRFQQNVLLPNP 118 +L++ E+ +II Q+ L K D+ YI LT H + AI R + ++++ NP Sbjct: 310 ILANDDKELREVVIKIIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIENP 369 Query: 119 LLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVGFIAMHLVSAQMSGNMEDVAGVT 177 +L I+ Y F E++ II ++ ++ +P DE+ +I MH+ ++ + + Sbjct: 370 ILGTIKGKYMDIFSAVEKSCFIIKEKYYIENIPDDEIAYITMHIGASLEKSRVIKSKKIK 429 >UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E24 Length = 691 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 92/221 (41%), Gaps = 12/221 (5%) Query: 57 LNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLP 116 ++ +L +L++ LE++ + I +E + D+ Y+ + +KR + L Sbjct: 183 VSNKLLDLIARDKLEMIDSALGEID--KELMAPFADTSYLYFMVYLALMLKRLELGQELS 240 Query: 117 NPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDV--- 173 E+ + E+ I + GV+LP+DE ++ S ++ E+ Sbjct: 241 LDATSKEAAKRAPEYNVAEKIFRHIAETFGVELPEDEACGFTPYIKSGKLRKPSEEWIDA 300 Query: 174 --AGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQ 231 ++ L+ E++ + + + + Q LV+HL+ +RI E+ + + Sbjct: 301 ENIELSTLVYELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQN---PYLD 357 Query: 232 AVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIE 272 ++ +Y +Q E + Q K+ EI FL ++I Sbjct: 358 QIRSDYAHVYQIVEEAVHQVMP--QVKVPDDEIGFLVMHIA 396 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 8/111 (7%) Query: 66 SHIPLEVMAT---CDRIISLAQERLGK--LQD-SIYISLTDHCQFAIKRFQQNVLLPNPL 119 I E + ++S +++L L D ++ L H + +I R ++N+++ NP Sbjct: 296 EWIDAENIELSTLVYELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQNPY 355 Query: 120 LWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNM 170 L I+ Y +Q+ EEA+ + V++P DE+GF+ MH+ ++ + ++ Sbjct: 356 LDQIRSDYAHVYQIVEEAVHQV--MPQVKVPDDEIGFLVMHIAASLDNKHL 404 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 105/269 (39%), Gaps = 11/269 (4%) Query: 15 VVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEV-- 72 + D ++ K++ I + + G EK+ L+ G + + E Sbjct: 127 INKDIKKVRKLLKAYNIELISKPYYGMKIKGREKDIRLAIRNEIGEDPAIFARDSDEELF 186 Query: 73 --MATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKE 130 + I + + + +L H +I R ++ + + + E Sbjct: 187 TRIQAIIADIDFPESFYMPYAN--FKNLVVHIYISILRIKEGKYIDLSDELSKRVISYDE 244 Query: 131 FQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQ-MSGNMEDVAGVTQLMREMLQLIKF 189 F + + + + K+L + P+DE+ ++ MHL+S ++ + +++L ++M+ I Sbjct: 245 FNIANKVVKELSKKLDLTFPEDEILYLTMHLISKNAVTNYEKVSPEISELAQKMIDEIYK 304 Query: 190 QFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAI 249 +++ + L HL L R+ ++ + + +K N A+ A Sbjct: 305 VSKYDFRSNIDLFFALALHLGPLIERLRYGLTMKN---PILNDIKDN-QIAFMLATVATN 360 Query: 250 FIGLQYQRKISPAEIMFLAINIERVRKEH 278 I Y+ ++ EI ++A++I + + Sbjct: 361 PINETYKTRVCDDEIGYIALHIASAMENN 389 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 93/230 (40%), Gaps = 16/230 (6%) Query: 48 KEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIK 107 K + + + + L +I L+V+ C++ +++ + D + L K Sbjct: 185 KRLLIHDEDESTTVLSELRNI-LDVLNECEKNLNI------QFADDVLYHLALRFWLFGK 237 Query: 108 RFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMS 167 R Q + + KEF+ + A + ++ +P DEV ++A HL+S+++ Sbjct: 238 RIVQGKKIDFDPVEKEVIQQTKEFEAAQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQ 297 Query: 168 ------GNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS 221 + +D + ++++M+ + + + + L+ HLK +RI Sbjct: 298 YSGNSLQSHDDYKNLQNIVQKMVTEFQAFTCITFPNRKAVEENLLLHLKPAYYRIKYGLQ 357 Query: 222 INDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINI 271 + + + + +K Y + +++ +K+S E +AI+ Sbjct: 358 VEN---PMIELIKTKYKDLFLITKKVIHHFETAIGKKVSDEEAALIAIHF 404 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%) Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVG 155 +L H + A R + + + NP++ I+ Y F + ++ + + +G ++ +E Sbjct: 339 ENLLLHLKPAYYRIKYGLQVENPMIELIKTKYKDLFLITKKVIHHFETAIGKKVSDEEAA 398 Query: 156 FIAMHLVS 163 IA+H Sbjct: 399 LIAIHFGG 406 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 89/210 (42%), Gaps = 5/210 (2%) Query: 68 IPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRL 126 P E + I+ ++ D + S+ H A++R + + N ++ + Sbjct: 203 FPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPMKDV 262 Query: 127 YPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQL 186 + + E +++++ RL +++P EVG+I +HL +A + E + V ++ + Sbjct: 263 FDSQRNNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHDELLVSVRPKEDDVAEF 322 Query: 187 IKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAER 246 + + + L TH+K R+ + +KQN+PQA++ A Sbjct: 323 VSTCLAEG-NYDKSLLDDLTTHMKSAINRLKLGMHFKN---PYLSKIKQNFPQAFEEALY 378 Query: 247 IAIFIGLQYQRKISPAEIMFLAINIERVRK 276 +Y +++ E ++A++ E ++ Sbjct: 379 FKAKFEQKYDVQVNEDETAYIALHFEAYKE 408 Score = 60.7 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 38/80 (47%) Query: 89 KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ 148 S+ LT H + AI R + + NP L I++ +P+ F+ +++ VQ Sbjct: 331 NYDKSLLDDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQAFEEALYFKAKFEQKYDVQ 390 Query: 149 LPKDEVGFIAMHLVSAQMSG 168 + +DE +IA+H + + Sbjct: 391 VNEDETAYIALHFEAYKERS 410 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 92/230 (40%), Gaps = 11/230 (4%) Query: 57 LNGRLSELLSHIPLEVMATCDRIISL-AQERLGKLQDSIYISLTDHCQFAIKRFQQNVLL 115 + LL+ I ++ + +S ++ K+ DS +I L H A++R + + Sbjct: 199 EISSENRLLNLIDKSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETI 258 Query: 116 PNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVA- 174 + ++F+ + I++ +++P DE+G+I MHL +++ ++ Sbjct: 259 SMEQDVLNELKSIEQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKLRLETKNHNF 318 Query: 175 -----GVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESL 229 + + + +++L +F ++ + LV H+ RI I + L Sbjct: 319 SLDDVELMNIAKRLIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRIKMGMDIRN---PL 375 Query: 230 QQAVKQNYPQAWQCAERIAIFIGLQYQRK-ISPAEIMFLAINIERVRKEH 278 +K Y + I I + I +EI +LA++ + + Sbjct: 376 LNQIKTEYKDIYDGVANIIYIIKEKLDIDNIPESEIAYLAMHFGSCMERN 425 Score = 63.8 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 4/138 (2%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERL---GKLQDSIYI 96 I+ G + S + S +E+M R+I LA + + Sbjct: 293 PIDEIGYITMHLRGSKLRLETKNHNFSLDDVELMNIAKRLIELATDEFGFDFSTDKKLLN 352 Query: 97 SLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVG 155 L +H ++ R + + + NPLL I+ Y + + II ++L + +P+ E+ Sbjct: 353 DLVNHMAPSLCRIKMGMDIRNPLLNQIKTEYKDIYDGVANIIYIIKEKLDIDNIPESEIA 412 Query: 156 FIAMHLVSAQMSGNMEDV 173 ++AMH S +E+V Sbjct: 413 YLAMHFGSCMERNLIEEV 430 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 13/207 (6%) Query: 80 ISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALT 139 + ++ KL D + ++ H AIKR Q + + E+Q E + Sbjct: 198 LDTCRKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLH-PQEANLAQEVEYQSALEIVE 256 Query: 140 IIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMRE-----MLQLIKFQFSLN 194 I +++G+ LP +E +IA+HL + +S + + + + +LQ I + Sbjct: 257 KIRQQMGIVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQQLLVVLQKIDQETGFC 316 Query: 195 YQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQ 254 E+ L L+ H+ L R+ S+ + L + +K++Y +Q R + Sbjct: 317 LAEDPLLIDGLMMHITPLLQRLNNGTSMEN---PLLETIKKDYSDFFQLTIRHFSDVPFF 373 Query: 255 YQRKISPAEIMFLAINI----ERVRKE 277 K++ E+ +L I++ ER+ + Sbjct: 374 APYKVTEGELAYLTIHLTAAMERLANQ 400 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 3/142 (2%) Query: 42 NSSGIEKEYALSSHELNGRLSELLSHIPLEV---MATCDRIISLAQERLGKLQDSIYISL 98 L + ++ + E + EV + + I + L Sbjct: 268 PEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQQLLVVLQKIDQETGFCLAEDPLLIDGL 327 Query: 99 TDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIA 158 H ++R + NPLL I++ Y FQL + + ++ + E+ ++ Sbjct: 328 MMHITPLLQRLNNGTSMENPLLETIKKDYSDFFQLTIRHFSDVPFFAPYKVTEGELAYLT 387 Query: 159 MHLVSAQMSGNMEDVAGVTQLM 180 +HL +A + A V + Sbjct: 388 IHLTAAMERLANQQKARVLVIC 409 >UniRef50_B1SDR3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDR3_9STRE Length = 199 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 2 NMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRL 61 +I + LNNNV +V ++Q + VVMG GI FQK+ + I S +EK + L + E Sbjct: 1 MFRIVQALNNNVALVKNEQDDQAVVMGLGIVFQKKKSDLITPSKVEKVFLLKTEESKENF 60 Query: 62 SELLSHIPLEVMATCDRII-SLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 LL +I L+++ +I L + +Q+ +Y+S TDH ++ + L Sbjct: 61 LTLLKNILLDILTVTYNMIDDLVAKYHFPVQEYLYVSPTDHVYLVYQKLLKGAH-QESHL 119 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM 180 DI Y EFQ+ +EA+ I+ ++L V P+DE+G IA+H ++A+ G + +++ Sbjct: 120 PDISAAYVTEFQMAQEAVAILSQKLSVTFPEDELGRIAIHFINAKREGEVTPSFQISR-T 178 Query: 181 REMLQLIKFQFS 192 + +L+L+K +FS Sbjct: 179 KHILELVKQEFS 190 Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 4/86 (4%) Query: 192 SLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFI 251 ++ + Y H+ + ++L+ A + Y +Q A+ + Sbjct: 85 KYHFPVQEYLYVSPTDHVYLVYQKLLKGAHQESH----LPDISAAYVTEFQMAQEAVAIL 140 Query: 252 GLQYQRKISPAEIMFLAINIERVRKE 277 + E+ +AI+ ++E Sbjct: 141 SQKLSVTFPEDELGRIAIHFINAKRE 166 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 103/220 (46%), Gaps = 12/220 (5%) Query: 62 SELLSHIPLEVMATCDRIIS-LAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL 120 + LL+ I ++ + I+S L +E +L DS YI L H AI+R + + Sbjct: 212 NRLLNFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIKIDPD 271 Query: 121 WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAG----- 175 + EF++G+ + I+ + +++P DE+G+I MHL A++ N Sbjct: 272 VLEELAKLPEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNSVSKLEEDIAN 331 Query: 176 --VTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAV 233 + ++ + ++++++ + ++ +++ + L HL R+ +I + L + Sbjct: 332 LDIKRIGKNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRN---PLLNNI 388 Query: 234 KQNYPQAWQCAERIAIFIGLQYQR-KISPAEIMFLAINIE 272 K+ YP + ++ + L + +I +EI ++ ++I Sbjct: 389 KEKYPMEYNATKKACEILKLNTKVDEIPDSEIAYITMHIA 428 Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 5/146 (3%) Query: 40 RINSSGIEKEYALSSHELNGRLSELLSHI-PLEVMATCDRIISLAQERLGKL---QDSIY 95 ++ G + + +S+L I L++ I+ + ++ L + + Sbjct: 301 PVDEIGYITMHLKGAKLRLNSVSKLEEDIANLDIKRIGKNIVEVVEKELNIFLKDDERLL 360 Query: 96 ISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEV 154 LT+H AI R + + + NPLL +I+ YP E+ ++A I+ V +P E+ Sbjct: 361 KDLTNHLVPAISRLKMKLNIRNPLLNNIKEKYPMEYNATKKACEILKLNTKVDEIPDSEI 420 Query: 155 GFIAMHLVSAQMSGNMEDVAGVTQLM 180 +I MH+ +A +E+ V Sbjct: 421 AYITMHIAAAIYKKGLEEKIKVVISC 446 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 101/247 (40%), Gaps = 14/247 (5%) Query: 35 KRAGERINSSG------IEKEYALSSHELNGRLSELLSHI--PLEVMATCDRIISLAQER 86 K+ G R+ I + S + ++ + EV ++ + Sbjct: 166 KKEGMRVAGQETKIRFCISEYIFNSQKDTGDIGNKFYKDMFSSDEVENLRIILMEAITDF 225 Query: 87 LGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLG 146 +L D + +L H +KRF++ + KEF+ ++ +T I +LG Sbjct: 226 NLRLTDIAFRNLLVHSLIMLKRFEKKRHVKYDEEEIELFSGTKEFRCAQQIITEISGKLG 285 Query: 147 VQLPKDEVGFIAMHLVSAQMS--GNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQR 204 + L DEV ++ HL+S+Q N++ + + ++L I+ ++ +++ Sbjct: 286 ISLG-DEVYYLTQHLISSQRFLIENLDGDYEYKEEIEDILNTIRSGTGIDLSDDNQLING 344 Query: 205 LVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEI 264 L HL R+ +I + ++K YP A++ A I +++ K +EI Sbjct: 345 LAMHLSAALQRLRFDMNIRN---EFLDSIKNLYPLAFELAVVAGEVIEKKHKLKAKESEI 401 Query: 265 MFLAINI 271 FLA++ Sbjct: 402 GFLAMHF 408 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 50/118 (42%) Query: 70 LEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPK 129 E + I + + L H A++R + ++ + N L I+ LYP Sbjct: 317 KEEIEDILNTIRSGTGIDLSDDNQLINGLAMHLSAALQRLRFDMNIRNEFLDSIKNLYPL 376 Query: 130 EFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLI 187 F+L A +I+K+ ++ + E+GF+AMH +A + +++ + I Sbjct: 377 AFELAVVAGEVIEKKHKLKAKESEIGFLAMHFGAALERKGLNRKQEPKKVVLVCIAGI 434 >UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pectobacterium RepID=C6DIT7_PECCP Length = 516 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 98/232 (42%), Gaps = 15/232 (6%) Query: 53 SSHELNGRLSELLSHIPLEVMATCDRIISLAQERL-GKLQDSIYISLTDHCQFAIKRFQQ 111 S G L+++ E ++ + ++ + +L L + YI++ H + R Q Sbjct: 185 HSRLDPGSYKALINYFGEEDVSFVESLLQDMERQLSYPLGEPYYINIFTHTLIMMHRIAQ 244 Query: 112 NVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSA------- 164 L Q++ + F + + ++ I++R+ LP DEV FI +++S+ Sbjct: 245 GKALMMAEESVHQQVDNRIFSIAQNMVSQIEQRVESTLPSDEVWFIYQYIISSGIVMEER 304 Query: 165 ---QMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHAS 221 Q+ ++ + Q+ +++ + + L ++ L+ H+K L R+ Sbjct: 305 ADNQLLRYQFSNGESRRITHALTQIFSDLINIDLRTDKLLHEGLLIHIKPLLNRLKYQIH 364 Query: 222 INDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRK-ISPAEIMFLAINIE 272 I + L +K + + ++ + ++Q K ++ EI +L I+ + Sbjct: 365 IRN---PLLDDIKSEFIDIYDMTQQAMDEVCQRFQLKPVAEDEIGYLTIHFQ 413 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Query: 42 NSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDH 101 + + S+ + R++ L+ I +++ I L ++L ++ L H Sbjct: 303 ERADNQLLRYQFSNGESRRITHALTQIFSDLIN-----IDLRTDKL------LHEGLLIH 351 Query: 102 CQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQ-LPKDEVGFIAMH 160 + + R + + + NPLL DI+ + + + ++A+ + +R ++ + +DE+G++ +H Sbjct: 352 IKPLLNRLKYQIHIRNPLLDDIKSEFIDIYDMTQQAMDEVCQRFQLKPVAEDEIGYLTIH 411 Query: 161 LVSAQMSG 168 +A Sbjct: 412 FQAALERQ 419 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.150 0.423 Lambda K H 0.267 0.0460 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,783,532,134 Number of Sequences: 3077464 Number of extensions: 75238096 Number of successful extensions: 304452 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1653 Number of HSP's successfully gapped in prelim test: 1177 Number of HSP's that attempted gapping in prelim test: 293394 Number of HSP's gapped (non-prelim): 6001 length of query: 278 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 151 effective length of database: 649,558,428 effective search space: 98083322628 effective search space used: 98083322628 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 92 (39.9 bits)