16/01/2012 09:25:12 : INFO  : Run start: Mon Jan 16 09:25:12 GMT 2012
16/01/2012 09:25:12 : INFO  : Initialised job
16/01/2012 09:25:12 : INFO  : Renaming log file 'phyre2_20120116_092512.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/2d5ea66f0091f510/phyre_20120116_092512.log'
16/01/2012 09:25:12 : INFO  : Initialised job:
Sequence
>batch____
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS
FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ
IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV
NIEIDPQTQAVVDTVERVLAARENAMNQPGTEA

16/01/2012 09:25:13 : INFO  : Checked sequence
16/01/2012 09:25:14 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 09:25:14 : INFO  : PSI-BLAST 3 iterations
16/01/2012 09:26:54 : INFO  : PSI-BLAST 5 iterations
16/01/2012 09:28:10 : INFO  : Finished PSI-BLAST
16/01/2012 09:28:10 : INFO  : Running Buildali to generate a3m file
16/01/2012 09:32:38 : INFO  : Converting to HMM
16/01/2012 09:32:38 : INFO  : Calibrating HMM
16/01/2012 09:32:44 : INFO  : Searching HMM database
16/01/2012 09:36:44 : INFO  : Finished buildali
16/01/2012 09:36:44 : INFO  : Predicting secondary structure
16/01/2012 09:36:44 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 09:36:44 : INFO  : Predicting Disordered regions
16/01/2012 09:36:44 : INFO  : Predicted Disorder (Disopred)
16/01/2012 09:36:44 : INFO  : Running memsat_svm check
16/01/2012 09:38:02 : INFO  : Globular protein
16/01/2012 09:38:02 : INFO  : Predicted Transmembrane (memsat_svm) ID '2d5ea66f0091f510'
16/01/2012 09:38:02 : INFO  : Initialising fold library search
16/01/2012 09:38:02 : INFO  : Initialised search input
16/01/2012 09:38:02 : INFO  : Building Ensemble models
16/01/2012 09:38:02 : INFO  : Building hh.c1i8dB_.model.1.pdb
16/01/2012 09:38:03 : INFO  : Building c1i8dB_.1.pdb
16/01/2012 09:38:03 : INFO  : Building c1kzlA_.2.pdb
16/01/2012 09:38:03 : INFO  : Building c3a35B_.3.pdb
16/01/2012 09:38:03 : INFO  : Building c3ddyA_.4.pdb
16/01/2012 09:38:04 : INFO  : Building d1i8da2.5.pdb
16/01/2012 09:38:04 : INFO  : Building d1kzla2.6.pdb
16/01/2012 09:38:04 : INFO  : Building c1hzeB_.7.pdb
16/01/2012 09:38:05 : INFO  : Building c1i18B_.8.pdb
16/01/2012 09:38:05 : INFO  : Building d1i8da1.9.pdb
16/01/2012 09:38:05 : INFO  : Building c1pkvA_.10.pdb
16/01/2012 09:38:06 : INFO  : Building c1pkvB_.11.pdb
16/01/2012 09:38:06 : INFO  : Building d1kzla1.12.pdb
16/01/2012 09:38:06 : INFO  : Building d2g50a1.13.pdb
16/01/2012 09:38:07 : INFO  : Building c3nrfA_.14.pdb
16/01/2012 09:38:07 : INFO  : Building d1pkla1.15.pdb
16/01/2012 09:38:08 : INFO  : Building d1e0ta1.16.pdb
16/01/2012 09:38:08 : INFO  : Building d1liua1.17.pdb
16/01/2012 09:38:09 : INFO  : Building d1a3xa1.18.pdb
16/01/2012 09:38:09 : INFO  : Building c3o44G_.19.pdb
16/01/2012 09:38:11 : INFO  : Building d2hx0a1.20.pdb
16/01/2012 09:38:12 : INFO  : Finished HH model building
16/01/2012 09:38:12 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 09:38:14 : INFO  : html domain output complete ID '2d5ea66f0091f510'
16/01/2012 09:48:06 : INFO  : Run end  : Mon Jan 16 09:48:06 GMT 2012
