Phyre 2 alignment of P0AFU8 with c2ky9A_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AFU8
Confidence | 4.74% | Date | Thu Jan 5 11:27:19 GMT 2012
Rank | 88 | Aligned Residues | 28
% Identity | 18% | Template | c2ky9A_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein ydhk; | PDBTitle: solution nmr structure of ydhk c-terminal domain from b.subtilis,2 northeast structural genomics consortium target target sr518
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | L | I | P | E | T | L | E | R | T | T | L | G | K | K | K | L | G | A | R | V | N | I | E | I | D | P | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | V | I | Q | E | E | I | K | D | A | G | D | K | T | L | Q | P | G | D | Q | V | I | L | E | A | S | H | M
Template Known Secondary structure |  |  |  |  | G | G | G | B | S | T | T | T | T | S |  |  |  | T | T |  |  |  |  | B | S | S |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions