Phyre 2 alignment of P0AFU8 with d1a3xa1

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Job Description | P0AFU8
Confidence | 34.68% | Date | Thu Jan 5 11:27:19 GMT 2012
Rank | 18 | Aligned Residues | 48
% Identity | 15% | Template | d1a3xa1
SCOP info | PK beta-barrel domain-like | PK beta-barrel domain-like | Pyruvate kinase beta-barrel domain
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |  | . | . |  | . | . | . | 50 | . | . | . | . | . | . | . |  | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | H | M | L | D | G | L | E | T | G | A | S | V | A | H | . | N | G | . | C | C | L | T | V | T | E | I | N | G | N | . | H | V | S | F | D | L | M | K | E | T | L | R | I | T | N | L | G | D | L | K | V | G | D | W | V | N | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | N | I | T | K | V | I | S | A | G | R | I | I | Y | V | D | D | G | V | L | S | F | Q | V | L | E | V | V | D | D | K | T | L | K | V | K | A | L | N | A | . | . | . | . | . | . | . | G | K | I | C | S | H | K | G | V | N | L
Template Known Secondary structure |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  | S | S |  | . | . | . | . | . | . | . |  |  |  |  | S | S |  | B |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 180 | .

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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