BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (109 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobact... 221 6e-57 UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmon... 176 3e-43 UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae Re... 91 2e-17 UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZ... 90 2e-17 UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae Rep... 88 7e-17 UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterob... 88 7e-17 UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis... 86 4e-16 UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia c... 86 5e-16 UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fis... 78 9e-14 UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteur... 76 3e-13 UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionale... 74 2e-12 UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reineke... 73 3e-12 UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular... 72 8e-12 UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio ... 71 1e-11 UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromoh... 69 5e-11 UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5... 69 6e-11 UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcaniv... 69 6e-11 UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alterom... 68 1e-10 UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrio... 67 2e-10 UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma prot... 66 3e-10 UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=... 66 4e-10 UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pas... 66 4e-10 UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteure... 64 1e-09 UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewane... 64 2e-09 UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp.... 64 2e-09 UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemo... 63 2e-09 UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Sacchar... 63 4e-09 UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumon... 61 1e-08 UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinob... 60 3e-08 UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudom... 60 3e-08 UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=... 59 5e-08 UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewane... 59 5e-08 UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelo... 59 7e-08 UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma p... 58 8e-08 UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychro... 58 9e-08 UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinob... 58 1e-07 UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idioma... 58 1e-07 UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewane... 57 2e-07 UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=... 57 2e-07 UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=She... 57 2e-07 UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine syn... 56 3e-07 UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvib... 56 3e-07 UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoa... 55 5e-07 UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio Re... 55 7e-07 UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewane... 55 1e-06 UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isom... 53 3e-06 UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma pr... 53 3e-06 UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewane... 52 4e-06 UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamon... 52 8e-06 UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoa... 50 2e-05 UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinom... 50 2e-05 UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychro... 50 2e-05 UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiel... 49 5e-05 UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromon... 47 2e-04 UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwell... 47 2e-04 UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothi... 47 2e-04 UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritel... 47 3e-04 UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinom... 45 6e-04 UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewane... 45 0.001 UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus... 40 0.031 UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alterom... 39 0.035 >UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobacteriaceae RepID=YQCC_ECOLI Length = 109 Score = 221 bits (563), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS Sbjct: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 >UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=A9N2H5_SALPB Length = 128 Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 87/109 (79%), Positives = 89/109 (81%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVR QL LE LLREH+HWR D PQ H F STQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 20 MTTHDRVRQQLHTLETLLREHRHWRQDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMH 79 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 LLDN QPLP AFAVAPYYEMALA DHPQR ILA L+ LDALF D S Sbjct: 80 TLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDALFVRDKS 128 >UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae RepID=Q1CFD8_YERPN Length = 110 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++VR LQ +E +RE W+ P+ F S +PF +DTM +WLQWV +PRM+ Sbjct: 1 MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATD-HPQRALILAELEKLDALFADDA 108 LL+ P P FA+ PY+E AL+ D P + +LA+L LD L ++ Sbjct: 61 ALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKES 109 >UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZI2_SEROD Length = 109 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 57/88 (64%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VRL LQA+E +RE W+ P+P F ST+PF +D+M EWLQW+ +PRM+ Sbjct: 1 MSIQNQVRLSLQAIEQSMRELALWQATPPEPEAFASTEPFCVDSMLAEEWLQWIFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHP 88 LLD PLP FA+ PY+E AL P Sbjct: 61 ALLDAHAPLPTRFAITPYFEEALKDKDP 88 >UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae RepID=C2LKW8_PROMI Length = 107 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+ + +L +E ++ W+ D P F S++PF +DTME EWLQWVLIPR+ Sbjct: 1 MTSEQHILARLLLIEEEMKNIGLWQLDAPNDEAFASSEPFCIDTMEAHEWLQWVLIPRLS 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRAL-ILAELEKLDALF 104 L+D+ LP AFA+APYYE A D + + +L L +LDALF Sbjct: 61 SLIDSGMALPTAFAIAPYYEEAFKDDETRDYVDLLNHLRELDALF 105 >UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CET9_DICZE Length = 106 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 60/104 (57%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++R L A+E L+ W++ P F S +PF +DTM +WLQWV +PRMH Sbjct: 1 MSVESQIRQSLFAVERALKASSLWQSSAPDEAAFASREPFCIDTMAAEQWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 LLD+ PLP FAV PY+E++ +L +L LDALF Sbjct: 61 TLLDDGAPLPVRFAVLPYFEVSFDGRADDVGELLTQLRMLDALF 104 >UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRK1_SODGM Length = 106 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT H +VR +L +E + + + W+ P F+S +PF +DTME +WLQWVL+ RMH Sbjct: 1 MTLHQQVRQRLFDIEQAMHDAEIWQPQPPVRAAFDSVEPFCIDTMEAQQWLQWVLLQRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 LLD PLP FA+ PY+E AL P+ +L +L +LD L DA Sbjct: 61 ALLDRDAPLPERFALTPYFEEAL----PEAFALLTQLRQLDCLLGGDA 104 >UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia coli n=4 Tax=Enterobacteriaceae RepID=Q7N8Q5_PHOLL Length = 110 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++ +LQ +E +RE W++ P+P F S +PF +D M EWLQWVLIPRM+ Sbjct: 1 MSTAKQILHKLQLIEEAMREIDLWQSHPPKPEAFESVEPFSIDRMLAEEWLQWVLIPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAE-LEKLDALFADD 107 LL+ LP AFA+APY+E + D R L E L LD LF D Sbjct: 61 ALLEQGLALPTAFAIAPYFEESYKEDTTGRYQQLFEHLRALDRLFMQD 108 >UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fischeri RepID=B5FAV5_VIBFM Length = 104 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 50/83 (60%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTT + L+ L L H HW+ P +ST+PF +DT+ EWLQW+ IP+M+ Sbjct: 1 MTTSLELSTLLEQLAQQLEHHGHWQRMSPSIADLSSTEPFAIDTLSASEWLQWIFIPKMN 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMAL 83 L++N +P P F++APY E AL Sbjct: 61 YLIENNKPTPKGFSIAPYIEEAL 83 >UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PR56_9PAST Length = 125 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 50/80 (62%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + +L LQ L++++ E W+ P F S +PF +DTM P EWLQW+ IPRM+ L+ Sbjct: 24 YQQTKLHLQELQSVMVELNLWQMTAPAESAFLSQEPFALDTMSPTEWLQWIFIPRMYALI 83 Query: 64 DNKQPLPGAFAVAPYYEMAL 83 ++ PLP ++ PY E AL Sbjct: 84 ESGSPLPTKISITPYIEEAL 103 >UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionales RepID=B8KDN4_VIBPA Length = 104 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Query: 17 LLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVA 76 ++R+ W+ D P + +S +PF +DT++P +WLQWV +P+M L++ K PLP F+++ Sbjct: 17 VMRQLGLWQQDAPSTEELSSNEPFSVDTLKPEQWLQWVFLPKMTALVEQKMPLPTGFSIS 76 Query: 77 PYYEMALATDHPQRALILAELEKLDAL 103 PY+E + + P+ A +L+ L +D + Sbjct: 77 PYFEESWKS-CPEYAPVLSLLVSIDEV 102 >UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGS5_9GAMM Length = 102 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 51/94 (54%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L +AL+ W+ P P + ST PF +DT+ LEW QWV I R+ L++ QPLP Sbjct: 9 LDQCQALMERQNQWQTIAPLPRKLMSTAPFMVDTLSFLEWFQWVYIARLRALIEAGQPLP 68 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 VAPY E +L D + ++A + +LD L Sbjct: 69 QGALVAPYAEESLKADGAENPELIALIRQLDELI 102 >UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC Length = 376 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 49/73 (67%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VR L +E LRE W+ P+ FNST+PF +DTM+P EWLQWV +PRMH Sbjct: 1 MSRENQVRQSLFDIERALRESPFWQVVPPEEEAFNSTEPFSLDTMKPEEWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAF 73 LLD++ LP ++ Sbjct: 61 ALLDSELALPRSW 73 >UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CX08_9VIBR Length = 98 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Query: 21 HQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYE 80 H W+ EP +S QPF +DT+EP EWLQWV I R+ +++ QPLP F +APY+E Sbjct: 15 HALWQAQEPTASAMSSQQPFSVDTLEPHEWLQWVFIQRIESMIEMGQPLPKGFEIAPYFE 74 Query: 81 MALATDHPQRALILAELEKLD 101 P+ I+ L+KLD Sbjct: 75 EVWKL-RPEYQEIILVLKKLD 94 >UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY60_CHRSD Length = 108 Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+H+ + L+ L A LR WR +EP F+S QPF +DTME +WL++V + R+ Sbjct: 1 MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLE 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQ-RALILAELEKLDALFAD 106 L + + PLP +VAP + L P R ++ + ++D + + Sbjct: 61 TLAETEAPLPATCSVAPAIDTWLKEASPSVRRVVTEAVAEVDRIVTE 107 >UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX84_9GAMM Length = 109 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + V+ L LE LR W + P HQ +ST+PF +DT+ +WLQW+ IPR+ ++ Sbjct: 8 ENAVKKLLSELEVELRRQNLWESAPPSSHQLSSTEPFCVDTLSLPQWLQWIFIPRIKAIM 67 Query: 64 DNKQPLPGAFAVAPYYEMAL 83 D LP +APY E L Sbjct: 68 DGGGVLPSNCEIAPYAEQVL 87 >UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VM14_ALCBS Length = 104 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 48/94 (51%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L L+ L + W P P FNS+ PFF DTM EWLQWV +PR +L+ PLP Sbjct: 11 LDDLQVELDQQGLWAAQPPAPSAFNSSTPFFADTMNFSEWLQWVFVPRFRAILEGDHPLP 70 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 G +AP E AL +++ L++ D F Sbjct: 71 GQCDIAPMAEEALKGLEQDVTEVISLLKRFDDHF 104 >UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IIR4_PSEHT Length = 106 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + + L L ALL++HQ W+N+ S PF DTM +WLQ+V I ++ L+ Sbjct: 2 YQQTQAYLVQLRALLKKHQLWQNEPIAAEALQSNVPFCHDTMAFEQWLQFVFIEKVEQLI 61 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +KQPLP FA+AP +M LA+ I+ L LDA + Sbjct: 62 IDKQPLPRNFAIAPMAQMTLASKKG-SGEIITLLTALDAFLGE 103 >UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrionaceae RepID=A7N1W7_VIBHB Length = 133 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 38/59 (64%) Query: 21 HQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYY 79 H+ W+ P ST+PF +DT+ P EWLQW+ I RM LL++ QPLP F++ PY+ Sbjct: 50 HELWQQTMPSAEALQSTEPFAIDTLHPHEWLQWIFIARMRALLESNQPLPRGFSIEPYF 108 >UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KSR6_9GAMM Length = 111 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 5/108 (4%) Query: 1 MTTHDRVRLQLQA----LEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLI 56 MT+ D RL++ A +EA LR+ + W P S QPF +DT++ +WLQ++ + Sbjct: 1 MTSLDH-RLEIAARLIDVEAALRQLRLWDETPPSAEALASAQPFAVDTLDFYQWLQFIFL 59 Query: 57 PRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 P MH +++ Q +P + AVAP E + + P ++ LE+LD L Sbjct: 60 PTMHGIIERGQAMPDSCAVAPMAEESFNSTSPPVVELIVTLEELDQLI 107 >UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=Vibrionaceae RepID=Q6LN18_PHOPR Length = 106 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 19 REHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPY 78 R + W + P S +PF +DT+ +WLQW+ IPRM L+ KQPLP F ++PY Sbjct: 19 RNAERWESAPPSNTALASAEPFAVDTLSCSQWLQWIFIPRMTQLIALKQPLPQHFELSPY 78 Query: 79 YEMALATDHPQRALILAELEKLDALF 104 E A+ D +IL +LD LF Sbjct: 79 VEEAMKHDSGVN-IILGVTRELDNLF 103 >UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pasteurellaceae RepID=B0QRS5_HAEPR Length = 104 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V+ L LE LR H W P + +PF + T+ +WLQW+ +PRMH LL+ Sbjct: 4 QVKQHLTDLEIALRVHNLWEATPPSAEALANDEPFCVSTLSATQWLQWIFLPRMHALLEA 63 Query: 66 KQPLPGAFAVAPYYEMAL 83 LP FA++PY E AL Sbjct: 64 NAELPRNFAISPYLEEAL 81 >UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteurellaceae RepID=Y1436_HAEIN Length = 106 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ + L+ L+ +++ W+ P F S +PF +DTM EWLQWV IPRM LL Sbjct: 2 RNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALL 61 Query: 64 DNKQPLPGAFAVAPYYEMAL 83 ++ LP A++PY E A+ Sbjct: 62 ESGSALPNKIAISPYIEEAM 81 >UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewanella RepID=Q085F1_SHEFN Length = 120 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L LE LL+E Q W + P ST PF D M +WLQ++ IP+M +L+ +QPLP Sbjct: 25 LIKLEQLLKEFQLWSDTSPPVSALTSTAPFSCDVMAFEQWLQFIFIPKMTELVVQRQPLP 84 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 A+AP E H LI A+L++ D L + Sbjct: 85 TNMALAPMAEHVWQGMHYGDVLI-AQLQQFDTLLS 118 >UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WYX8_9GAMM Length = 108 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 49/104 (47%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++ L L+ L + W P P F+S PFF DTM EWLQWV I R Sbjct: 5 MSQRAQLSSLLDDLQTELDQQGLWATQPPAPSAFDSGTPFFADTMNFSEWLQWVFIARFR 64 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 +L+ PLPG +AP E AL I+ +++ D F Sbjct: 65 AILEADHPLPGQCDIAPMAEEALKGMEQDVTGIINLIKQFDDQF 108 >UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemophilus influenzae PittAA RepID=A4NFL7_HAEIN Length = 85 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 36/58 (62%) Query: 26 NDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMAL 83 ND P F S +PF +DTM EWLQWV IPRM LL++ LP A++PY E A+ Sbjct: 3 NDAPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEAM 60 >UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I39_SACD2 Length = 108 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 1/94 (1%) Query: 14 LEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAF 73 LE LR W+ P STQPF +DT+E +WLQ+V IPR+ L + QPLP Sbjct: 15 LEMHLRSASLWQAQLPSQAALASTQPFCVDTLEFQQWLQFVFIPRLRVLAETGQPLPLLC 74 Query: 74 AVAPYYEMA-LATDHPQRALILAELEKLDALFAD 106 VAP + T RA I+ LE++DAL ++ Sbjct: 75 NVAPMVSDGDVFTGVNARAEIVHTLEQIDALISN 108 >UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9Z7_TOLAT Length = 111 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 53/96 (55%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V L+ LE L+ Q W+++ P STQPF +DT+E +WLQ++ + R+ +L + Sbjct: 4 QVVFLLKELELTLQRLQLWQDEAPSAEALASTQPFALDTLEFHQWLQFIFLERLRFMLTD 63 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLD 101 QPLP + A+ P + AL+L L +LD Sbjct: 64 NQPLPSSVAIYPMATEVYKKKLKEHALLLDVLARLD 99 >UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZ78_MARAV Length = 113 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 D+V L +E LR+ W+ + P F STQPF +DTM+ +WLQ+V + +M L++ Sbjct: 9 DQVTDGLLQIEIELRQLGVWQTESLPPEAFQSTQPFCLDTMDFTQWLQFVFLEKMKALVE 68 Query: 65 NKQPLPGAFAVAPYYEMAL-ATDHPQRALILAELEKLDALFADDA 108 LP A +AP E + R LI A LE++D L + Sbjct: 69 AGHALPEASGIAPMAEEHFRGREQSGRELISA-LEEMDRLLSSGG 112 >UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudomonadaceae RepID=C1DFI1_AZOVD Length = 113 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 50/98 (51%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 Q+ +E LR W + P +S QPF +DT+ EWLQW+ +PRM +++ + L Sbjct: 11 QMLLIEQELRALGMWASSLPSDEALSSEQPFCIDTLVFEEWLQWIFLPRMKVIVEENRTL 70 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 P + + P E+A + A +L + ++D L + Sbjct: 71 PASSGILPMAELAYRERLAEVARLLGAIGEVDRLISGG 108 >UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKS8_HAHCH Length = 124 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL- 69 L LE+ LR WR D+P S PF DT+E EWLQ++ I RM +++ + P+ Sbjct: 13 LLGLESELRRMGLWREDQPHEDALASVTPFCADTLEFHEWLQFIFIERMKVIVEYRAPMP 72 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLD 101 P + P EMA Q A +LA L ++D Sbjct: 73 PMRSGIEPAAEMAYQGRLGQVAGLLASLRQVD 104 >UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=A8H6M3_SHEPA Length = 106 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 8 RLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQ 67 R +L ALE L + P ST PF D M +WLQ++ +P+MH L+DN+ Sbjct: 7 REKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQM 66 Query: 68 PLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 PLP A ++AP E A + + +I L +LDAL + Sbjct: 67 PLPTAISIAPMAEHVWAANIEYKRVI-QLLTELDALLS 103 >UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWU5_DICNV Length = 113 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 41/76 (53%) Query: 7 VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 +RL LQ LE L+ W+ + P S QPF +DT+ EWLQWV IP+M ++ Sbjct: 9 MRLTLQELEQALKTIDWWQENPPPKAALASVQPFCVDTLTFTEWLQWVYIPKMLQFMEVY 68 Query: 67 QPLPGAFAVAPYYEMA 82 Q LP A + P E A Sbjct: 69 QALPAASGLLPIAEEA 84 >UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS95_9GAMM Length = 132 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 43/79 (54%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 T H+ + L LE LRE Q W P P ST+PF +D + EWLQ++ +PRM+ Sbjct: 3 TRHNELGNLLFELEKELREAQLWGKQSPAPEALLSTEPFSIDLLTFTEWLQFIFLPRMYA 62 Query: 62 LLDNKQPLPGAFAVAPYYE 80 ++ + LP ++AP E Sbjct: 63 TIEAAEELPETCSIAPMAE 81 >UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGZ6_9GAMM Length = 115 Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 12/110 (10%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ L L +LE L+ W +P H NS PF +DT+ +WLQ+V I +M +L Sbjct: 9 RSQLALLLTSLECELKALDLWEASKPSEHLLNSELPFCIDTLSFPQWLQFVFIEKMKIIL 68 Query: 64 DNKQPLPGAFAVAPYYEMALATDH------PQRALILAELEKLDALFADD 107 + PLP +VAP +AT++ P LI+ LE++D L ++ Sbjct: 69 NMAMPLPQTISVAP-----MATEYFTLQQLPSSPLIIL-LEQIDTLITEN 112 >UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JGS6_9ALTE Length = 114 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 +L A+E LR+ W+++ ++ S +PF +DTM +WLQ+VL+ R+ L+++ QPL Sbjct: 17 RLLAIEIQLRQMNCWQSEPLAAEKYLSREPFCLDTMSFEQWLQFVLLARLKQLVEDDQPL 76 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 P VAP E + P +ALI EL LD L Sbjct: 77 PTVSGVAPMAEEHYRSG-PGQALI-RELAALDELLG 110 >UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idiomarina RepID=Q5QXS7_IDILO Length = 114 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 DR+ +L +L W++ P S QPF +DT+E +WLQ++++PRM L+D Sbjct: 12 DRIERELNSLGL-------WQSHHPPVQALESQQPFAVDTLEFHQWLQFIMLPRMWALVD 64 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +K+PLP AV+P ++ Q ++A + + D L + Sbjct: 65 SKRPLPEGIAVSPMAAHIYRSELEQYEQLIALIREFDVLLSG 106 >UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewanella RepID=A8FY51_SHESH Length = 106 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L LE+ LR W ++ P N + PF + M W+Q++ IP+M DL+D Q LP Sbjct: 10 LDKLESELRLQSLWSSENPSQEAMNDSSPFSCEAMPFENWVQFIFIPKMKDLIDRGQALP 69 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 A+AP ++ LIL + LD L ++ Sbjct: 70 TNIAIAPMAHHVWSSKKNLHTLILI-FDNLDTLLSE 104 >UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=Vibrio RepID=Q7MIF5_VIBVY Length = 104 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 41/82 (50%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + L+ LE L+ W P+P S PF +DT+ P +WLQW+ I R+ Sbjct: 1 MTNTSTLTGLLRQLELELKRLGWWDEIPPEPALLQSEMPFAVDTLAPQQWLQWIFIARIQ 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMA 82 ++ LP F + PY+E A Sbjct: 61 QMMAQGASLPKGFLLTPYFEEA 82 >UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=Shewanella RepID=A0KZ33_SHESA Length = 111 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 32/63 (50%) Query: 18 LREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAP 77 L+ W P ST PF D M +WLQ++ IPRM L+D QPLP A+AP Sbjct: 22 LQSAGLWSTRAPSDEAMASTAPFACDLMSLAQWLQFIFIPRMQALIDAGQPLPSKIAIAP 81 Query: 78 YYE 80 E Sbjct: 82 MAE 84 >UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine synthase)(Uracil hydrolyase) n=20 Tax=Pseudomonas RepID=Q48N70_PSE14 Length = 109 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 QL +E LR W P S +PF +DT+E +WLQW+ +PRM +L+ PL Sbjct: 11 QLLLIERELRALGWWDATPPSEQALASQEPFSVDTLEFAQWLQWIFLPRMKVILERDLPL 70 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 P A + EM A + L+ L + D L Sbjct: 71 PNASGILEMAEMVYAGRLSETRLLQQHLARFDQLI 105 >UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKE8_CELJU Length = 109 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L +E LRE + W D S QPF +DTM +WLQ++ +PRM+ L++ + PLP Sbjct: 13 LMDVEKELRELRLWECDALPEAALLSQQPFAIDTMSFPQWLQFIFLPRMYTLVEQQLPLP 72 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 G +AP E A + ++ L+++D L Sbjct: 73 GNCGIAPMAEQYFAPLSLNTSPLIDHLQQIDRLLT 107 >UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5J1_9GAMM Length = 106 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 47/95 (49%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L LE L++HQ W+ + P NS+ PF DT+ +WLQ++ IP+M L+ PLP Sbjct: 10 LDNLEHNLKKHQLWQQELPSLDALNSSAPFCCDTLAFEQWLQFIFIPKMRQLIALNIPLP 69 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 + + P E + Q +L + D LF Sbjct: 70 ASMTLLPMAEQSWQAKLSQYQDLLEIISGFDQLFV 104 >UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio RepID=C6YF13_VIBCH Length = 103 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L LE LR Q W+ P S +PF +DT+ P EWLQW+ +P+M + + +P Sbjct: 11 LDELEVRLRAAQLWQATPPSSQALVSQEPFAVDTLLPHEWLQWIFLPKMQQAI-AQNAVP 69 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 FA+ PY+ + +A +LA ++++D + Sbjct: 70 RGFALEPYFSEVWQGEARYQA-VLAVIQQIDKV 101 >UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ93_SHEPW Length = 113 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 1/103 (0%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 + R L ALEA L + P S PF D M +WLQ++ +P+MH +LD+ Sbjct: 5 KTRELLVALEAELAAQNLLNIESPTKEALASRAPFACDVMPFEQWLQFIFLPKMHTILDS 64 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 PLP A ++AP + + + LI ++ LD L + + Sbjct: 65 NLPLPNAISIAPMAQHVWEYEERYQTLI-GLIQALDTLLSGNG 106 >UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isomerase C)(TRNA pseudouridylate synthase C) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBV5_9GAMM Length = 124 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Query: 24 WRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP---GAFAVAPYYE 80 W + P S +PF +DT+ EWLQWV IP+M D + ++ LP G A+A Sbjct: 24 WGDASPDDAALTSIEPFCVDTLRFSEWLQWVYIPKMRDYIASQGALPERSGLLAIAEEAW 83 Query: 81 MALATDHPQRALILAELEKLDALFADDAS 109 A D R L+L + LD L +DA+ Sbjct: 84 RGSAED--TRGLLLV-MRALDGLVNNDAA 109 >UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S341_9GAMM Length = 108 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 46/92 (50%) Query: 14 LEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAF 73 +E LR+ W P ST+PF +DT+ +WLQ++ IP ++ +L+ ++ LP Sbjct: 12 IEGQLRQLGMWDKIPPSSQALLSTEPFCVDTLTLPQWLQFIFIPTIYSMLEQQEALPERC 71 Query: 74 AVAPYYEMALATDHPQRALILAELEKLDALFA 105 +AP E ++ LE++D L + Sbjct: 72 GIAPMAEEFFRGTGLAIGELVTSLERMDELLS 103 >UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S4N1_SHEAM Length = 135 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L LE L+ WR++ P S PF D + EWLQ++ +PR LL+ +QPLP Sbjct: 40 LDELEQALKAALLWRDEMPTAQALASQAPFGCDLLAFEEWLQFIFLPRFRVLLETRQPLP 99 Query: 71 GAFAVAPYYEMALATDHPQRAL--ILAELE 98 A ++ P T + AL ILA L+ Sbjct: 100 AAMSILPMALHVWGTHADKDALLIILANLD 129 >UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamonadaceae RepID=A9BUM5_DELAS Length = 132 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 42/79 (53%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 TTH ++ QLQ LE LR W P P ST PF DT++ EWLQWV +PR+ Sbjct: 15 TTHQKLLDQLQQLEDELRSQSLWSAVAPSPEAMASTMPFMYDTLKLQEWLQWVFLPRLRA 74 Query: 62 LLDNKQPLPGAFAVAPYYE 80 ++D + LP V P E Sbjct: 75 VVDARGQLPCQSHVHPLAE 93 >UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QZ7_PSEA6 Length = 118 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + +V L L L+ + W P S PF D M +WLQ++ IP+M++L Sbjct: 10 SEVQVEKLLSQLAEALKTAEQWTYSPPSQWAMQSELPFACDRMGFAQWLQFIFIPKMNEL 69 Query: 63 LDNKQPLPGAFAVAPY---YEMALATDHPQRALILAELEKLDALFAD 106 L ++PLP A+ P + T P R +L L ++D F Sbjct: 70 LQEEKPLPTRMALMPMAQEWAKEYTTGQPTREPVLDVLAQIDLAFCG 116 >UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDP0_9GAMM Length = 126 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 14 LEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAF 73 LE ++R+ W P S +PF +DTM +WL++V++ + +L + Q LP + Sbjct: 32 LEKVMRQVNVWDMPIPSEEALTSKEPFCIDTMNFDQWLRYVMLEKFKPMLASGQSLPSSS 91 Query: 74 AVAPYY-EMALATDHPQRALILAELEKLDALFADD 107 +AP E D + I++ LE +DA D Sbjct: 92 CIAPMAQEFYRTQDELAKQAIVSALEAIDACLNQD 126 >UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1ST62_PSYIN Length = 113 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 49/96 (51%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L ALE LR W+ +P +S +PF +D++ ++WLQ++ + +M L+ QPLP Sbjct: 18 LTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLPQPLP 77 Query: 71 GAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 V P + + A I + ++D LF++ Sbjct: 78 SGMQVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE 113 >UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q7_KANKD Length = 112 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 24 WRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMAL 83 W P H+ S+ PF +DT++ EWLQ+V +P+M + ++ ++ PG + P E Sbjct: 27 WSESHPGHHKLQSSMPFCVDTLQLEEWLQFVFLPKMREYVEEERLPPGPAQITPIAEETY 86 Query: 84 ATDHPQRALILAELEKLDAL 103 D P+ ++ L K D + Sbjct: 87 K-DQPELKSLIELLRKFDEI 105 >UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KHF3_AERHH Length = 111 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L L A L+ + W+ P S PF +DT+ +WLQ+VLIPRM L+ + PLP Sbjct: 11 LGELTAELQRLERWQAAHPGEEALASELPFCVDTLSFDQWLQFVLIPRMEQLVLLQAPLP 70 Query: 71 GAFAVAP 77 + ++ P Sbjct: 71 SSVSLYP 77 >UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y02_COLP3 Length = 115 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 45/92 (48%) Query: 18 LREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAP 77 L+ W+ +P + +S PF DT+ +WLQ++ IP++ ++ +Q LP ++ P Sbjct: 21 LKSLNLWQIPQPSAAELSSNAPFCCDTLAFGQWLQFIFIPKITMMIHQQQSLPTKISLTP 80 Query: 78 YYEMALATDHPQRALILAELEKLDALFADDAS 109 E A ++ ++K+D A+ S Sbjct: 81 MAEEAFTHLSTSAKPLIDVIQKIDKALAEKVS 112 >UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0X0_HALNC Length = 119 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 39/77 (50%) Query: 25 RNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALA 84 + P ST PF DT+E WL+WV +PRM +++++ L ++AP E A Sbjct: 28 NTERPSDAALASTAPFCFDTLEFHAWLEWVFLPRMQQTIEHERNLAAPCSIAPLAEYQFA 87 Query: 85 TDHPQRALILAELEKLD 101 T +LA L +LD Sbjct: 88 TYAEPTHHLLALLTELD 104 >UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6H8_9GAMM Length = 109 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + + + L A+E L+ W P ST PF +DTM WLQ++ + +M Sbjct: 2 MTIYLQAQQLLAAIEVELKNAALWNEIPPSVEALASTTPFCIDTMPFTNWLQFIFLAKMT 61 Query: 61 DLLDNKQPLPGAFAVAPYYEMA 82 + + PLP A+ P E A Sbjct: 62 QRVVMQMPLPENMAIQPMAEEA 83 >UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VW47_MARMS Length = 113 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLP 70 L L+ +++ W +EP S++PF +DTM +WL++V+I R +L LP Sbjct: 15 LMDLQMAMQDCDVWLCEEPTKEALQSSEPFCIDTMRFEQWLRFVMIERFKTMLATGSDLP 74 Query: 71 GAFAVAPYYEMALATD-HPQRALILAELEKLD 101 ++P E A H + I+ L ++D Sbjct: 75 VRCHISPMAEEAFKDKPHAKVRHIVTCLNRID 106 >UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QGB2_SHELP Length = 105 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 QL+ +EA L+ Q W++ P PF ++M +WLQ++ +P+M +++ L Sbjct: 8 QLRLIEAELKRLQLWQDQPPSAEAMADPTPFACESMTFEQWLQFIFLPKMGEIIAVNGAL 67 Query: 70 PGAFAVAPYYEMALATDHPQRALI 93 P A+ P E R LI Sbjct: 68 PSQIALTPMAEHVWQGRAEMRVLI 91 >UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMW6_ACIBL Length = 106 Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Query: 14 LEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAF 73 +EA ++ +W+ + Q+ Q F MDTM +WLQ+ +PR+ + + ++Q P + Sbjct: 17 IEAEMKRIGYWQEAPLREEQYGFQQAFAMDTMTYAQWLQFAFLPRVREAITSQQ-FPKSS 75 Query: 74 AVAPYYEMALATDHPQRALILAELEKLDALFA 105 V D L+ L DALF+ Sbjct: 76 DVGTQAIREFDGDINASGLV-TRLCDFDALFS 106 >UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RVQ0_ALTMD Length = 112 Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Query: 11 LQALEALLREHQHWRNDEPQPHQFNS----TQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 L LE +++E W + +P +S T PF +D++ WL ++ IP+M ++ K Sbjct: 14 LDNLEVIMQEEGIWPDAKPTRKALDSALQSTVPFAVDSLPFESWLAFIFIPKMRIIIAQK 73 Query: 67 QPLPGAFAVAPYYEMAL 83 Q LP A + P ++ L Sbjct: 74 QTLP-AMQITPAAQVYL 89 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobact... 144 9e-34 UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae Re... 143 1e-33 UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmon... 143 2e-33 UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterob... 139 2e-32 UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae Rep... 138 5e-32 UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinob... 138 5e-32 UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcaniv... 133 2e-30 UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp.... 132 3e-30 UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma prot... 132 4e-30 UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5... 131 6e-30 UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritel... 131 6e-30 UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia c... 131 9e-30 UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idioma... 130 1e-29 UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis... 129 3e-29 UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudom... 129 4e-29 UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwell... 128 8e-29 UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=... 127 9e-29 UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvib... 127 1e-28 UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewane... 127 1e-28 UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZ... 126 2e-28 UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fis... 126 2e-28 UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumon... 126 2e-28 UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma pr... 126 3e-28 UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewane... 126 3e-28 UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alterom... 125 5e-28 UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoa... 124 6e-28 UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=She... 124 6e-28 UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychro... 124 7e-28 UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinom... 124 7e-28 UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Sacchar... 124 7e-28 UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewane... 123 1e-27 UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine syn... 123 2e-27 UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewane... 123 2e-27 UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinob... 122 5e-27 UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewane... 121 7e-27 UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma p... 121 7e-27 UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteur... 121 1e-26 UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pas... 121 1e-26 UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromon... 120 1e-26 UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionale... 120 1e-26 UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinom... 120 1e-26 UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelo... 120 2e-26 UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychro... 119 2e-26 UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewane... 118 4e-26 UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteure... 118 6e-26 UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrio... 118 6e-26 UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular... 118 7e-26 UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reineke... 117 1e-25 UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoa... 115 4e-25 UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=... 115 4e-25 UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isom... 114 7e-25 UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=... 113 2e-24 UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromoh... 113 3e-24 UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothi... 112 3e-24 UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio Re... 111 6e-24 UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio ... 109 2e-23 UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiel... 106 3e-22 UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamon... 104 1e-21 UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemo... 97 2e-19 Sequences not found previously or not previously below threshold: UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alterom... 88 1e-16 UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus... 73 2e-12 UniRef50_C5BNG7 Putative uncharacterized protein n=1 Tax=Teredin... 53 4e-06 UniRef50_B4SIW0 Putative uncharacterized protein n=2 Tax=Stenotr... 51 8e-06 >UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobacteriaceae RepID=YQCC_ECOLI Length = 109 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS Sbjct: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 >UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae RepID=Q1CFD8_YERPN Length = 110 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++VR LQ +E +RE W+ P+ F S +PF +DTM +WLQWV +PRM+ Sbjct: 1 MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATD-HPQRALILAELEKLDALFADDA 108 LL+ P P FA+ PY+E AL+ D P + +LA+L LD L ++ Sbjct: 61 ALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKES 109 >UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=A9N2H5_SALPB Length = 128 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 87/109 (79%), Positives = 89/109 (81%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVR QL LE LLREH+HWR D PQ H F STQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 20 MTTHDRVRQQLHTLETLLREHRHWRQDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMH 79 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 LLDN QPLP AFAVAPYYEMALA DHPQR ILA L+ LDALF D S Sbjct: 80 TLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDALFVRDKS 128 >UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CET9_DICZE Length = 106 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 61/106 (57%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++R L A+E L+ W++ P F S +PF +DTM +WLQWV +PRMH Sbjct: 1 MSVESQIRQSLFAVERALKASSLWQSSAPDEAAFASREPFCIDTMAAEQWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 LLD+ PLP FAV PY+E++ +L +L LDALF + Sbjct: 61 TLLDDGAPLPVRFAVLPYFEVSFDGRADDVGELLTQLRMLDALFEE 106 >UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae RepID=C2LKW8_PROMI Length = 107 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+ + +L +E ++ W+ D P F S++PF +DTME EWLQWVLIPR+ Sbjct: 1 MTSEQHILARLLLIEEEMKNIGLWQLDAPNDEAFASSEPFCIDTMEAHEWLQWVLIPRLS 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHP-QRALILAELEKLDALFAD 106 L+D+ LP AFA+APYYE A D +L L +LDALF Sbjct: 61 SLIDSGMALPTAFAIAPYYEEAFKDDETRDYVDLLNHLRELDALFKQ 107 >UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZ78_MARAV Length = 113 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 D+V L +E LR+ W+ + P F STQPF +DTM+ +WLQ+V + +M L++ Sbjct: 9 DQVTDGLLQIEIELRQLGVWQTESLPPEAFQSTQPFCLDTMDFTQWLQFVFLEKMKALVE 68 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 LP A +AP E +++ LE++D L + Sbjct: 69 AGHALPEASGIAPMAEEHFRGREQSGRELISALEEMDRLLSSGG 112 >UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VM14_ALCBS Length = 104 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 51/104 (49%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M ++ L L+ L + W P P FNS+ PFF DTM EWLQWV +PR Sbjct: 1 MPQRQQLVALLDDLQVELDQQGLWAAQPPAPSAFNSSTPFFADTMNFSEWLQWVFVPRFR 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 +L+ PLPG +AP E AL +++ L++ D F Sbjct: 61 AILEGDHPLPGQCDIAPMAEEALKGLEQDVTEVISLLKRFDDHF 104 >UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WYX8_9GAMM Length = 108 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 49/104 (47%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++ L L+ L + W P P F+S PFF DTM EWLQWV I R Sbjct: 5 MSQRAQLSSLLDDLQTELDQQGLWATQPPAPSAFDSGTPFFADTMNFSEWLQWVFIARFR 64 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 +L+ PLPG +AP E AL I+ +++ D F Sbjct: 65 AILEADHPLPGQCDIAPMAEEALKGMEQDVTGIINLIKQFDDQF 108 >UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KSR6_9GAMM Length = 111 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%) Query: 1 MTTHDR---VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIP 57 MT+ D + +L +EA LR+ + W P S QPF +DT++ +WLQ++ +P Sbjct: 1 MTSLDHRLEIAARLIDVEAALRQLRLWDETPPSAEALASAQPFAVDTLDFYQWLQFIFLP 60 Query: 58 RMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 MH +++ Q +P + AVAP E + + P ++ LE+LD L Sbjct: 61 TMHGIIERGQAMPDSCAVAPMAEESFNSTSPPVVELIVTLEELDQLIT 108 >UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX84_9GAMM Length = 109 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 51/103 (49%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + V+ L LE LR W + P HQ +ST+PF +DT+ +WLQW+ IPR+ + Sbjct: 7 QENAVKKLLSELEVELRRQNLWESAPPSSHQLSSTEPFCVDTLSLPQWLQWIFIPRIKAI 66 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 +D LP +APY E L + +EK+D + Sbjct: 67 MDGGGVLPSNCEIAPYAEQVLPEVPEYTDRVQNLIEKIDTKLS 109 >UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6H8_9GAMM Length = 109 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 45/107 (42%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + + + L A+E L+ W P ST PF +DTM WLQ++ + +M Sbjct: 2 MTIYLQAQQLLAAIEVELKNAALWNEIPPSVEALASTTPFCIDTMPFTNWLQFIFLAKMT 61 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 + + PLP A+ P E A +LA + D L Sbjct: 62 QRVVMQMPLPENMAIQPMAEEAFKAVTADTRELLALILSFDQLLNKK 108 >UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia coli n=4 Tax=Enterobacteriaceae RepID=Q7N8Q5_PHOLL Length = 110 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++ +LQ +E +RE W++ P+P F S +PF +D M EWLQWVLIPRM+ Sbjct: 1 MSTAKQILHKLQLIEEAMREIDLWQSHPPKPEAFESVEPFSIDRMLAEEWLQWVLIPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQR-ALILAELEKLDALFADD 107 LL+ LP AFA+APY+E + D R + L LD LF D Sbjct: 61 ALLEQGLALPTAFAIAPYFEESYKEDTTGRYQQLFEHLRALDRLFMQD 108 >UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idiomarina RepID=Q5QXS7_IDILO Length = 114 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 55/106 (51%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + + L +E L W++ P S QPF +DT+E +WLQ++++PRM Sbjct: 1 MEQYQKAARLLDRIERELNSLGLWQSHHPPVQALESQQPFAVDTLEFHQWLQFIMLPRMW 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 L+D+K+PLP AV+P ++ Q ++A + + D L + Sbjct: 61 ALVDSKRPLPEGIAVSPMAAHIYRSELEQYEQLIALIREFDVLLSG 106 >UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRK1_SODGM Length = 106 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT H +VR +L +E + + + W+ P F+S +PF +DTME +WLQWVL+ RMH Sbjct: 1 MTLHQQVRQRLFDIEQAMHDAEIWQPQPPVRAAFDSVEPFCIDTMEAQQWLQWVLLQRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 LLD PLP FA+ PY+E AL P+ +L +L +LD L DA Sbjct: 61 ALLDRDAPLPERFALTPYFEEAL----PEAFALLTQLRQLDCLLGGDA 104 >UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudomonadaceae RepID=C1DFI1_AZOVD Length = 113 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 51/102 (50%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 + Q+ +E LR W + P +S QPF +DT+ EWLQW+ +PRM +++ Sbjct: 7 ALAEQMLLIEQELRALGMWASSLPSDEALSSEQPFCIDTLVFEEWLQWIFLPRMKVIVEE 66 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 + LP + + P E+A + A +L + ++D L + Sbjct: 67 NRTLPASSGILPMAELAYRERLAEVARLLGAIGEVDRLISGG 108 >UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y02_COLP3 Length = 115 Score = 128 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 50/108 (46%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 T + + L L L+ W+ +P + +S PF DT+ +WLQ++ IP++ Sbjct: 5 TDPEHISTLLADLAFELKSLNLWQIPQPSAAELSSNAPFCCDTLAFGQWLQFIFIPKITM 64 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 ++ +Q LP ++ P E A ++ ++K+D A+ S Sbjct: 65 MIHQQQSLPTKISLTPMAEEAFTHLSTSAKPLIDVIQKIDKALAEKVS 112 >UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKS8_HAHCH Length = 124 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 1 MT--THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPR 58 MT + + L LE+ LR WR D+P S PF DT+E EWLQ++ I R Sbjct: 1 MTDRIYAELADVLLGLESELRRMGLWREDQPHEDALASVTPFCADTLEFHEWLQFIFIER 60 Query: 59 MHDLLDNKQPL-PGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 M +++ + P+ P + P EMA Q A +LA L ++D + Sbjct: 61 MKVIVEYRAPMPPMRSGIEPAAEMAYQGRLGQVAGLLASLRQVDEAINN 109 >UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKE8_CELJU Length = 109 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 52/103 (50%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 H + L +E LRE + W D S QPF +DTM +WLQ++ +PRM+ L+ Sbjct: 6 HIALAEILMDVEKELRELRLWECDALPEAALLSQQPFAIDTMSFPQWLQFIFLPRMYTLV 65 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 + + PLPG +AP E A + ++ L+++D L Sbjct: 66 EQQLPLPGNCGIAPMAEQYFAPLSLNTSPLIDHLQQIDRLLTR 108 >UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ93_SHEPW Length = 113 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 + R L ALEA L + P S PF D M +WLQ++ +P+MH +LD+ Sbjct: 5 KTRELLVALEAELAAQNLLNIESPTKEALASRAPFACDVMPFEQWLQFIFLPKMHTILDS 64 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 PLP A ++AP + + ++ ++ LD L + + Sbjct: 65 NLPLPNAISIAPMAQHVW-EYEERYQTLIGLIQALDTLLSGNG 106 >UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZI2_SEROD Length = 109 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 42/89 (47%), Positives = 57/89 (64%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VRL LQA+E +RE W+ P+P F ST+PF +D+M EWLQW+ +PRM+ Sbjct: 1 MSIQNQVRLSLQAIEQSMRELALWQATPPEPEAFASTEPFCVDSMLAEEWLQWIFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQ 89 LLD PLP FA+ PY+E AL P Sbjct: 61 ALLDAHAPLPTRFAITPYFEEALKDKDPN 89 >UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fischeri RepID=B5FAV5_VIBFM Length = 104 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTT + L+ L L H HW+ P +ST+PF +DT+ EWLQW+ IP+M+ Sbjct: 1 MTTSLELSTLLEQLAQQLEHHGHWQRMSPSIADLSSTEPFAIDTLSASEWLQWIFIPKMN 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 L++N +P P F++APY E AL D I+ +DAL Sbjct: 61 YLIENNKPTPKGFSIAPYIEEALK-DIEGYNEIVRLCHAIDAL 102 >UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9Z7_TOLAT Length = 111 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 55/104 (52%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V L+ LE L+ Q W+++ P STQPF +DT+E +WLQ++ + R+ +L + Sbjct: 4 QVVFLLKELELTLQRLQLWQDEAPSAEALASTQPFALDTLEFHQWLQFIFLERLRFMLTD 63 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 QPLP + A+ P + AL+L L +LD + + Sbjct: 64 NQPLPSSVAIYPMATEVYKKKLKEHALLLDVLARLDEALSGKPA 107 >UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S341_9GAMM Length = 108 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 48/99 (48%) Query: 7 VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 + L +E LR+ W P ST+PF +DT+ +WLQ++ IP ++ +L+ + Sbjct: 5 IAEVLIDIEGQLRQLGMWDKIPPSSQALLSTEPFCVDTLTLPQWLQFIFIPTIYSMLEQQ 64 Query: 67 QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 + LP +AP E ++ LE++D L + Sbjct: 65 EALPERCGIAPMAEEFFRGTGLAIGELVTSLERMDELLS 103 >UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewanella RepID=A8FY51_SHESH Length = 106 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + L LE+ LR W ++ P N + PF + M W+Q++ IP+M DL+ Sbjct: 3 YLKTTELLDKLESELRLQSLWSSENPSQEAMNDSSPFSCEAMPFENWVQFIFIPKMKDLI 62 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 D Q LP A+AP ++ LIL + LD L ++ Sbjct: 63 DRGQALPTNIAIAPMAHHVWSSKKNLHTLIL-IFDNLDTLLSE 104 >UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IIR4_PSEHT Length = 106 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + + L L ALL++HQ W+N+ S PF DTM +WLQ+V I ++ L+ Sbjct: 2 YQQTQAYLVQLRALLKKHQLWQNEPIAAEALQSNVPFCHDTMAFEQWLQFVFIEKVEQLI 61 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +KQPLP FA+AP +M LA+ I+ L LDA + Sbjct: 62 IDKQPLPRNFAIAPMAQMTLASKKGS-GEIITLLTALDAFLGE 103 >UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5J1_9GAMM Length = 106 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 48/102 (47%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 V L LE L++HQ W+ + P NS+ PF DT+ +WLQ++ IP+M L Sbjct: 2 IEQTVMHLLDNLEHNLKKHQLWQQELPSLDALNSSAPFCCDTLAFEQWLQFIFIPKMRQL 61 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 + PLP + + P E + Q +L + D LF Sbjct: 62 IALNIPLPASMTLLPMAEQSWQAKLSQYQDLLEIISGFDQLF 103 >UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=Shewanella RepID=A0KZ33_SHESA Length = 111 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + + +L + L+ W P ST PF D M +WLQ++ IPRM L+ Sbjct: 8 YSQTQTKLAQIAHELQSAGLWSTRAPSDEAMASTAPFACDLMSLAQWLQFIFIPRMQALI 67 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 D QPLP A+AP E ++ ++ L +LD L + Sbjct: 68 DAGQPLPSKIAIAPMAEHVW-SEQAALTPLIGVLNELDMLLNE 109 >UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGZ6_9GAMM Length = 115 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 51/105 (48%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ L L +LE L+ W +P H NS PF +DT+ +WLQ+V I +M +L Sbjct: 9 RSQLALLLTSLECELKALDLWEASKPSEHLLNSELPFCIDTLSFPQWLQFVFIEKMKIIL 68 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 + PLP +VAP + ++ LE++D L ++ Sbjct: 69 NMAMPLPQTISVAPMATEYFTLQQLPSSPLIILLEQIDTLITENK 113 >UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VW47_MARMS Length = 113 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 + H + L L+ +++ W +EP S++PF +DTM +WL++V+I R Sbjct: 6 SDHHLLADLLMDLQMAMQDCDVWLCEEPTKEALQSSEPFCIDTMRFEQWLRFVMIERFKT 65 Query: 62 LLDNKQPLPGAFAVAPYYEMALATD-HPQRALILAELEKLDALFAD 106 +L LP ++P E A H + I+ L ++D + Sbjct: 66 MLATGSDLPVRCHISPMAEEAFKDKPHAKVRHIVTCLNRIDQHLSG 111 >UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I39_SACD2 Length = 108 Score = 124 bits (312), Expect = 7e-28, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 +++ L LE LR W+ P STQPF +DT+E +WLQ+V IPR+ L Sbjct: 4 RANQLLSLLMDLEMHLRSASLWQAQLPSQAALASTQPFCVDTLEFQQWLQFVFIPRLRVL 63 Query: 63 LDNKQPLPGAFAVAPYYEMA-LATDHPQRALILAELEKLDALFAD 106 + QPLP VAP + T RA I+ LE++DAL ++ Sbjct: 64 AETGQPLPLLCNVAPMVSDGDVFTGVNARAEIVHTLEQIDALISN 108 >UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=A8H6M3_SHEPA Length = 106 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 8 RLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQ 67 R +L ALE L + P ST PF D M +WLQ++ +P+MH L+DN+ Sbjct: 7 REKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQM 66 Query: 68 PLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 PLP A ++AP E A + + ++ L +LDAL + Sbjct: 67 PLPTAISIAPMAEHVWAANI-EYKRVIQLLTELDALLS 103 >UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine synthase)(Uracil hydrolyase) n=20 Tax=Pseudomonas RepID=Q48N70_PSE14 Length = 109 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 46/100 (46%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 V QL +E LR W P S +PF +DT+E +WLQW+ +PRM +L+ Sbjct: 7 EVAEQLLLIERELRALGWWDATPPSEQALASQEPFSVDTLEFAQWLQWIFLPRMKVILER 66 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 PLP A + EM A + L+ L + D L Sbjct: 67 DLPLPNASGILEMAEMVYAGRLSETRLLQQHLARFDQLIT 106 >UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewanella RepID=Q085F1_SHEFN Length = 120 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 L LE LL+E Q W + P ST PF D M +WLQ++ IP+M +L+ +QPL Sbjct: 24 YLIKLEQLLKEFQLWSDTSPPVSALTSTAPFSCDVMAFEQWLQFIFIPKMTELVVQRQPL 83 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 P A+AP E H +++A+L++ D L + Sbjct: 84 PTNMALAPMAEHVWQGMHYGD-VLIAQLQQFDTLLSQ 119 >UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JGS6_9ALTE Length = 114 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V +L A+E LR+ W+++ ++ S +PF +DTM +WLQ+VL+ R+ L+++ Sbjct: 13 QVADRLLAIEIQLRQMNCWQSEPLAAEKYLSREPFCLDTMSFEQWLQFVLLARLKQLVED 72 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 QPLP VAP E + Q ++ EL LD L Sbjct: 73 DQPLPTVSGVAPMAEEHYRSGPGQ--ALIRELAALDELLG 110 >UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QGB2_SHELP Length = 105 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ + QL+ +EA L+ Q W++ P PF ++M +WLQ++ +P+M Sbjct: 1 MSLY--TEKQLRLIEAELKRLQLWQDQPPSAEAMADPTPFACESMTFEQWLQFIFLPKMG 58 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +++ LP A+ P E R +++ + +LD + Sbjct: 59 EIIAVNGALPSQIALTPMAEHVWQGRAEMR-VLITIINQLDEHLSG 103 >UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS95_9GAMM Length = 132 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 T H+ + L LE LRE Q W P P ST+PF +D + EWLQ++ +PRM+ Sbjct: 3 TRHNELGNLLFELEKELREAQLWGKQSPAPEALLSTEPFSIDLLTFTEWLQFIFLPRMYA 62 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHPQ 89 ++ + LP ++AP E + + Sbjct: 63 TIEAAEELPETCSIAPMAEQFFSAEEAS 90 >UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PR56_9PAST Length = 125 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + +L LQ L++++ E W+ P F S +PF +DTM P EWLQW+ IPRM+ L+ Sbjct: 24 YQQTKLHLQELQSVMVELNLWQMTAPAESAFLSQEPFALDTMSPTEWLQWIFIPRMYALI 83 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 ++ PLP ++ PY E AL A +L + +++ + Sbjct: 84 ESGSPLPTKISITPYIEEALKEM-DGLAQLLRPISEIEKVL 123 >UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pasteurellaceae RepID=B0QRS5_HAEPR Length = 104 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V+ L LE LR H W P + +PF + T+ +WLQW+ +PRMH LL+ Sbjct: 4 QVKQHLTDLEIALRVHNLWEATPPSAEALANDEPFCVSTLSATQWLQWIFLPRMHALLEA 63 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 LP FA++PY E AL D + A L KL+ L Sbjct: 64 NAELPRNFAISPYLEEALK-DLDYLQALNAPLVKLETLL 101 >UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KHF3_AERHH Length = 111 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 49/108 (45%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + V L L A L+ + W+ P S PF +DT+ +WLQ+VLIPRM Sbjct: 1 MNQYLLVAGLLGELTAELQRLERWQAAHPGEEALASELPFCVDTLSFDQWLQFVLIPRME 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 L+ + PLP + ++ P + + +L + + D L + Sbjct: 61 QLVLLQAPLPSSVSLYPMASEVYKEELAEVEALLRLIARFDLLLSGKV 108 >UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionales RepID=B8KDN4_VIBPA Length = 104 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT ++ LQ L ++R+ W+ D P + +S +PF +DT++P +WLQWV +P+M Sbjct: 1 MTKAQQLLPLLQQLPLVMRQLGLWQQDAPSTEELSSNEPFSVDTLKPEQWLQWVFLPKMT 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 L++ K PLP F+++PY+E + + P+ A +L+ L +D + Sbjct: 61 ALVEQKMPLPTGFSISPYFEESWKS-CPEYAPVLSLLVSIDEV 102 >UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDP0_9GAMM Length = 126 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 H ++ L LE ++R+ W P S +PF +DTM +WL++V++ + +L Sbjct: 22 HHKLADLLLNLEKVMRQVNVWDMPIPSEEALTSKEPFCIDTMNFDQWLRYVMLEKFKPML 81 Query: 64 DNKQPLPGAFAVAPYYEMALAT-DHPQRALILAELEKLDALFADD 107 + Q LP + +AP + T D + I++ LE +DA D Sbjct: 82 ASGQSLPSSSCIAPMAQEFYRTQDELAKQAIVSALEAIDACLNQD 126 >UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWU5_DICNV Length = 113 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 48/99 (48%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +RL LQ LE L+ W+ + P S QPF +DT+ EWLQWV IP+M ++ Sbjct: 8 EMRLTLQELEQALKTIDWWQENPPPKAALASVQPFCVDTLTFTEWLQWVYIPKMLQFMEV 67 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 Q LP A + P E A + ++KLD L Sbjct: 68 YQALPAASGLLPIAEEAWKGCAESTDDLYRIVKKLDFLV 106 >UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1ST62_PSYIN Length = 113 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 49/97 (50%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 L ALE LR W+ +P +S +PF +D++ ++WLQ++ + +M L+ QPL Sbjct: 17 LLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLPQPL 76 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 P V P + + A I + ++D LF++ Sbjct: 77 PSGMQVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE 113 >UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S4N1_SHEAM Length = 135 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + ++ L LE L+ WR++ P S PF D + EWLQ++ +PR L Sbjct: 32 SDTKLISLLDELEQALKAALLWRDEMPTAQALASQAPFGCDLLAFEEWLQFIFLPRFRVL 91 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 L+ +QPLP A ++ P T + AL++ L LD Sbjct: 92 LETRQPLPAAMSILPMALHVWGTHADKDALLI-ILANLDDAVNGK 135 >UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteurellaceae RepID=Y1436_HAEIN Length = 106 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ + L+ L+ +++ W+ P F S +PF +DTM EWLQWV IPRM LL Sbjct: 2 RNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALL 61 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 ++ LP A++PY E A+ + + +L L L+ L ++ Sbjct: 62 ESGSALPNKIAISPYIEEAMK-EFNELQQLLTPLVALEELXNNN 104 >UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrionaceae RepID=A7N1W7_VIBHB Length = 133 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M T+ ++ LQ LEA L+ H+ W+ P ST+PF +DT+ P EWLQW+ I RM Sbjct: 30 MATNIQLVDLLQQLEAQLQHHELWQQTMPSAEALQSTEPFAIDTLHPHEWLQWIFIARMR 89 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 LL++ QPLP F++ PY+ A + +L + +D L Sbjct: 90 ALLESNQPLPRGFSIEPYFAEAWKQEL-HYGELLETIRTIDEL 131 >UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC Length = 376 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 35/73 (47%), Positives = 49/73 (67%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VR L +E LRE W+ P+ FNST+PF +DTM+P EWLQWV +PRMH Sbjct: 1 MSRENQVRQSLFDIERALRESPFWQVVPPEEEAFNSTEPFSLDTMKPEEWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAF 73 LLD++ LP ++ Sbjct: 61 ALLDSELALPRSW 73 >UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGS5_9GAMM Length = 102 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 52/100 (52%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 V L +AL+ W+ P P + ST PF +DT+ LEW QWV I R+ L++ Sbjct: 3 QDVCHLLDQCQALMERQNQWQTIAPLPRKLMSTAPFMVDTLSFLEWFQWVYIARLRALIE 62 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 QPLP VAPY E +L D + ++A + +LD L Sbjct: 63 AGQPLPQGALVAPYAEESLKADGAENPELIALIRQLDELI 102 >UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QZ7_PSEA6 Length = 118 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + +V L L L+ + W P S PF D M +WLQ++ IP+M++L Sbjct: 10 SEVQVEKLLSQLAEALKTAEQWTYSPPSQWAMQSELPFACDRMGFAQWLQFIFIPKMNEL 69 Query: 63 LDNKQPLPGAFAVAPYYEMA---LATDHPQRALILAELEKLDALFAD 106 L ++PLP A+ P + T P R +L L ++D F Sbjct: 70 LQEEKPLPTRMALMPMAQEWAKEYTTGQPTREPVLDVLAQIDLAFCG 116 >UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=Vibrionaceae RepID=Q6LN18_PHOPR Length = 106 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 19 REHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPY 78 R + W + P S +PF +DT+ +WLQW+ IPRM L+ KQPLP F ++PY Sbjct: 19 RNAERWESAPPSNTALASAEPFAVDTLSCSQWLQWIFIPRMTQLIALKQPLPQHFELSPY 78 Query: 79 YEMALATDHPQRALILAELEKLDALF 104 E A+ D +IL +LD LF Sbjct: 79 VEEAMKHDS-GVNIILGVTRELDNLF 103 >UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isomerase C)(TRNA pseudouridylate synthase C) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBV5_9GAMM Length = 124 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 40/88 (45%) Query: 22 QHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEM 81 W + P S +PF +DT+ EWLQWV IP+M D + ++ LP + E Sbjct: 22 GWWGDASPDDAALTSIEPFCVDTLRFSEWLQWVYIPKMRDYIASQGALPERSGLLAIAEE 81 Query: 82 ALATDHPQRALILAELEKLDALFADDAS 109 A +L + LD L +DA+ Sbjct: 82 AWRGSAEDTRGLLLVMRALDGLVNNDAA 109 >UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=Vibrio RepID=Q7MIF5_VIBVY Length = 104 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + L+ LE L+ W P+P S PF +DT+ P +WLQW+ I R+ Sbjct: 1 MTNTSTLTGLLRQLELELKRLGWWDEIPPEPALLQSEMPFAVDTLAPQQWLQWIFIARIQ 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 ++ LP F + PY+E A + +L+ L +D + Sbjct: 61 QMMAQGASLPKGFLLTPYFEEAWK-EQRDTQTLLSILRTIDEV 102 >UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY60_CHRSD Length = 108 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+H+ + L+ L A LR WR +EP F+S QPF +DTME +WL++V + R+ Sbjct: 1 MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLE 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQ-RALILAELEKLDALFAD 106 L + + PLP +VAP + L P R ++ + ++D + + Sbjct: 61 TLAETEAPLPATCSVAPAIDTWLKEASPSVRRVVTEAVAEVDRIVTE 107 >UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0X0_HALNC Length = 119 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 L + LRE + P ST PF DT+E WL+WV +PRM +++++ L Sbjct: 14 LLDEIAYTLREIGL-NTERPSDAALASTAPFCFDTLEFHAWLEWVFLPRMQQTIEHERNL 72 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 ++AP E AT +LA L +LD Sbjct: 73 AAPCSIAPLAEYQFATYAEPTHHLLALLTELDTQIN 108 >UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio RepID=C6YF13_VIBCH Length = 103 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + + L LE LR Q W+ P S +PF +DT+ P EWLQW+ +P+M Sbjct: 1 MQFNAVLVKLLDELEVRLRAAQLWQATPPSSQALVSQEPFAVDTLLPHEWLQWIFLPKMQ 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 + +P FA+ PY+ + +A +LA ++++D + Sbjct: 61 QAIAQN-AVPRGFALEPYFSEVWQGEARYQA-VLAVIQQIDKV 101 >UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CX08_9VIBR Length = 98 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 21 HQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYE 80 H W+ EP +S QPF +DT+EP EWLQWV I R+ +++ QPLP F +APY+E Sbjct: 15 HALWQAQEPTASAMSSQQPFSVDTLEPHEWLQWVFIQRIESMIEMGQPLPKGFEIAPYFE 74 Query: 81 MALATDHPQRALILAELEKLDA 102 P+ I+ L+KLD Sbjct: 75 EVWK-LRPEYQEIILVLKKLDD 95 >UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q7_KANKD Length = 112 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 4/106 (3%) Query: 1 MTTHDRVRLQL---QALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIP 57 M++ D + + +E + E + W P H+ S+ PF +DT++ EWLQ+V +P Sbjct: 1 MSSIDWLTKYIEIFDRIEEHMLELELWSESHPGHHKLQSSMPFCVDTLQLEEWLQFVFLP 60 Query: 58 RMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 +M + ++ ++ PG + P E D P+ ++ L K D + Sbjct: 61 KMREYVEEERLPPGPAQITPIAEETYK-DQPELKSLIELLRKFDEI 105 >UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamonadaceae RepID=A9BUM5_DELAS Length = 132 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 TTH ++ QLQ LE LR W P P ST PF DT++ EWLQWV +PR+ Sbjct: 15 TTHQKLLDQLQQLEDELRSQSLWSAVAPSPEAMASTMPFMYDTLKLQEWLQWVFLPRLRA 74 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHP-QRALILAELEKLDALFADDA 108 ++D + LP V P E + + +L L +D Sbjct: 75 VVDARGQLPCQSHVHPLAEHEWSQPVAFDKRQLLVLLLGIDDTLNQGG 122 >UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemophilus influenzae PittAA RepID=A4NFL7_HAEIN Length = 85 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Query: 26 NDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALAT 85 ND P F S +PF +DTM EWLQWV IPRM LL++ LP A++PY E A+ Sbjct: 3 NDAPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEAMK- 61 Query: 86 DHPQRALILAELEKLDALFADD 107 + + +L L L+ L ++ Sbjct: 62 EFDELQQLLTPLVALEELLNNN 83 >UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RVQ0_ALTMD Length = 112 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%) Query: 7 VRLQLQALEALLREHQHWRNDEPQ----PHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + L LE +++E W + +P ST PF +D++ WL ++ IP+M + Sbjct: 10 LSEALDNLEVIMQEEGIWPDAKPTRKALDSALQSTVPFAVDSLPFESWLAFIFIPKMRII 69 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 + KQ LP A + P ++ L + +A+L+ +D + ++ Sbjct: 70 IAQKQTLP-AMQITPAAQVYLNGIGHRT---IAQLQTIDDIASEKG 111 >UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMW6_ACIBL Length = 106 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 + + +EA ++ +W+ + Q+ Q F MDTM +WLQ+ +PR+ + + Sbjct: 8 EECAEAVDKIEAEMKRIGYWQEAPLREEQYGFQQAFAMDTMTYAQWLQFAFLPRVREAIT 67 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 ++Q P + V D ++ L DALF+ Sbjct: 68 SQQ-FPKSSDVGTQAIREFDGDINASG-LVTRLCDFDALFS 106 >UniRef50_C5BNG7 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNG7_TERTT Length = 45 Score = 52.6 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%) Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 ++N PLP VAP E A +L L KLD + + Sbjct: 1 MNNGAPLPDKCGVAPMAEEYFRGQQRDIAGLLGSLNKLDEVLS 43 >UniRef50_B4SIW0 Putative uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIW0_STRM5 Length = 119 Score = 51.4 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 32/95 (33%), Gaps = 5/95 (5%) Query: 14 LEALLREHQHWRNDEPQPHQFNSTQPF-FMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGA 72 +E LR + P S F D M +WL V +PR+H+ Q P Sbjct: 23 IEQALRALGWVVGEVGPPRAVTSA--FGSDDGMPFEQWLAQVFLPRLHEARAAGQ-WPPR 79 Query: 73 FAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 VA L P +L L +LD Sbjct: 80 SDVAVAAWRNLDG-QPGVESLLRLLAQLDERINKG 113 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae Re... 138 6e-32 UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinob... 135 4e-31 UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterob... 133 2e-30 UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcaniv... 132 4e-30 UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idioma... 131 5e-30 UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae Rep... 131 7e-30 UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritel... 131 7e-30 UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5... 131 9e-30 UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp.... 130 1e-29 UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmon... 129 2e-29 UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobact... 129 4e-29 UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=... 128 4e-29 UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudom... 128 7e-29 UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma prot... 128 8e-29 UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvib... 126 2e-28 UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinom... 126 3e-28 UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fis... 126 3e-28 UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma pr... 125 4e-28 UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewane... 125 5e-28 UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwell... 125 5e-28 UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia c... 124 6e-28 UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumon... 124 8e-28 UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoa... 124 1e-27 UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromon... 123 2e-27 UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=She... 122 3e-27 UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Sacchar... 122 5e-27 UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychro... 121 5e-27 UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine syn... 121 5e-27 UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelo... 121 8e-27 UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewane... 121 9e-27 UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewane... 120 2e-26 UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinob... 119 2e-26 UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis... 119 2e-26 UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewane... 119 2e-26 UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewane... 119 3e-26 UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinom... 119 4e-26 UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewane... 118 4e-26 UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZ... 118 5e-26 UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteur... 118 5e-26 UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma p... 118 6e-26 UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alterom... 116 2e-25 UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothi... 116 2e-25 UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionale... 116 2e-25 UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychro... 116 2e-25 UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pas... 116 3e-25 UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteure... 116 3e-25 UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrio... 115 4e-25 UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isom... 114 6e-25 UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reineke... 114 1e-24 UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=... 113 2e-24 UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular... 111 6e-24 UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiel... 111 6e-24 UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoa... 110 1e-23 UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio Re... 110 2e-23 UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromoh... 109 3e-23 UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=... 108 5e-23 UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamon... 105 4e-22 UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio ... 104 1e-21 UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus... 100 2e-20 UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alterom... 98 8e-20 UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemo... 96 2e-19 UniRef50_B4SIW0 Putative uncharacterized protein n=2 Tax=Stenotr... 83 2e-15 UniRef50_C5BNG7 Putative uncharacterized protein n=1 Tax=Teredin... 57 2e-07 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_Q1CFD8 Conserved protein n=26 Tax=Enterobacteriaceae RepID=Q1CFD8_YERPN Length = 110 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++VR LQ +E +RE W+ P+ F S +PF +DTM +WLQWV +PRM+ Sbjct: 1 MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDH-PQRALILAELEKLDALFADDA 108 LL+ P P FA+ PY+E AL+ D P + +LA+L LD L ++ Sbjct: 61 ALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKES 109 >UniRef50_A1TZ78 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZ78_MARAV Length = 113 Score = 135 bits (340), Expect = 4e-31, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 D+V L +E LR+ W+ + P F STQPF +DTM+ +WLQ+V + +M L++ Sbjct: 9 DQVTDGLLQIEIELRQLGVWQTESLPPEAFQSTQPFCLDTMDFTQWLQFVFLEKMKALVE 68 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 LP A +AP E +++ LE++D L + Sbjct: 69 AGHALPEASGIAPMAEEHFRGREQSGRELISALEEMDRLLSSGG 112 >UniRef50_C6CET9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CET9_DICZE Length = 106 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 61/106 (57%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++R L A+E L+ W++ P F S +PF +DTM +WLQWV +PRMH Sbjct: 1 MSVESQIRQSLFAVERALKASSLWQSSAPDEAAFASREPFCIDTMAAEQWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 LLD+ PLP FAV PY+E++ +L +L LDALF + Sbjct: 61 TLLDDGAPLPVRFAVLPYFEVSFDGRADDVGELLTQLRMLDALFEE 106 >UniRef50_Q0VM14 Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VM14_ALCBS Length = 104 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 51/104 (49%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M ++ L L+ L + W P P FNS+ PFF DTM EWLQWV +PR Sbjct: 1 MPQRQQLVALLDDLQVELDQQGLWAAQPPAPSAFNSSTPFFADTMNFSEWLQWVFVPRFR 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 +L+ PLPG +AP E AL +++ L++ D F Sbjct: 61 AILEGDHPLPGQCDIAPMAEEALKGLEQDVTEVISLLKRFDDHF 104 >UniRef50_Q5QXS7 Uncharacterized conserved protein n=2 Tax=Idiomarina RepID=Q5QXS7_IDILO Length = 114 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 55/106 (51%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + + L +E L W++ P S QPF +DT+E +WLQ++++PRM Sbjct: 1 MEQYQKAARLLDRIERELNSLGLWQSHHPPVQALESQQPFAVDTLEFHQWLQFIMLPRMW 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 L+D+K+PLP AV+P ++ Q ++A + + D L + Sbjct: 61 ALVDSKRPLPEGIAVSPMAAHIYRSELEQYEQLIALIREFDVLLSG 106 >UniRef50_C2LKW8 Yqcc like protein n=7 Tax=Enterobacteriaceae RepID=C2LKW8_PROMI Length = 107 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+ + +L +E ++ W+ D P F S++PF +DTME EWLQWVLIPR+ Sbjct: 1 MTSEQHILARLLLIEEEMKNIGLWQLDAPNDEAFASSEPFCIDTMEAHEWLQWVLIPRLS 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDH-PQRALILAELEKLDALFAD 106 L+D+ LP AFA+APYYE A D +L L +LDALF Sbjct: 61 SLIDSGMALPTAFAIAPYYEEAFKDDETRDYVDLLNHLRELDALFKQ 107 >UniRef50_A6F6H8 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6H8_9GAMM Length = 109 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 45/107 (42%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + + + L A+E L+ W P ST PF +DTM WLQ++ + +M Sbjct: 2 MTIYLQAQQLLAAIEVELKNAALWNEIPPSVEALASTTPFCIDTMPFTNWLQFIFLAKMT 61 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 + + PLP A+ P E A +LA + D L Sbjct: 62 QRVVMQMPLPENMAIQPMAEEAFKAVTADTRELLALILSFDQLLNKK 108 >UniRef50_B5JX84 Glyoxalase I n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX84_9GAMM Length = 109 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 51/103 (49%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + V+ L LE LR W + P HQ +ST+PF +DT+ +WLQW+ IPR+ + Sbjct: 7 QENAVKKLLSELEVELRRQNLWESAPPSSHQLSSTEPFCVDTLSLPQWLQWIFIPRIKAI 66 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 +D LP +APY E L + +EK+D + Sbjct: 67 MDGGGVLPSNCEIAPYAEQVLPEVPEYTDRVQNLIEKIDTKLS 109 >UniRef50_B4WYX8 Conserved domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WYX8_9GAMM Length = 108 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 49/104 (47%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++ L L+ L + W P P F+S PFF DTM EWLQWV I R Sbjct: 5 MSQRAQLSSLLDDLQTELDQQGLWATQPPAPSAFDSGTPFFADTMNFSEWLQWVFIARFR 64 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 +L+ PLPG +AP E AL I+ +++ D F Sbjct: 65 AILEADHPLPGQCDIAPMAEEALKGMEQDVTGIINLIKQFDDQF 108 >UniRef50_A9N2H5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=A9N2H5_SALPB Length = 128 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 87/109 (79%), Positives = 89/109 (81%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVR QL LE LLREH+HWR D PQ H F STQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 20 MTTHDRVRQQLHTLETLLREHRHWRQDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMH 79 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 LLDN QPLP AFAVAPYYEMALA DHPQR ILA L+ LDALF D S Sbjct: 80 TLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDALFVRDKS 128 >UniRef50_Q46919 Uncharacterized protein yqcC n=76 Tax=Enterobacteriaceae RepID=YQCC_ECOLI Length = 109 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH Sbjct: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS Sbjct: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 >UniRef50_Q2SKS8 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKS8_HAHCH Length = 124 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 1 MT--THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPR 58 MT + + L LE+ LR WR D+P S PF DT+E EWLQ++ I R Sbjct: 1 MTDRIYAELADVLLGLESELRRMGLWREDQPHEDALASVTPFCADTLEFHEWLQFIFIER 60 Query: 59 MHDLLDNKQPLPG-AFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 M +++ + P+P + P EMA Q A +LA L ++D + Sbjct: 61 MKVIVEYRAPMPPMRSGIEPAAEMAYQGRLGQVAGLLASLRQVDEAINN 109 >UniRef50_C1DFI1 Putative uncharacterized protein n=2 Tax=Pseudomonadaceae RepID=C1DFI1_AZOVD Length = 113 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 51/101 (50%) Query: 7 VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 + Q+ +E LR W + P +S QPF +DT+ EWLQW+ +PRM +++ Sbjct: 8 LAEQMLLIEQELRALGMWASSLPSDEALSSEQPFCIDTLVFEEWLQWIFLPRMKVIVEEN 67 Query: 67 QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 + LP + + P E+A + A +L + ++D L + Sbjct: 68 RTLPASSGILPMAELAYRERLAEVARLLGAIGEVDRLISGG 108 >UniRef50_B8KSR6 tRNA pseudouridine synthase C n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KSR6_9GAMM Length = 111 Score = 128 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%) Query: 1 MTT---HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIP 57 MT+ + +L +EA LR+ + W P S QPF +DT++ +WLQ++ +P Sbjct: 1 MTSLDHRLEIAARLIDVEAALRQLRLWDETPPSAEALASAQPFAVDTLDFYQWLQFIFLP 60 Query: 58 RMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 MH +++ Q +P + AVAP E + + P ++ LE+LD L Sbjct: 61 TMHGIIERGQAMPDSCAVAPMAEESFNSTSPPVVELIVTLEELDQLIT 108 >UniRef50_B3PKE8 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKE8_CELJU Length = 109 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 52/105 (49%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 H + L +E LRE + W D S QPF +DTM +WLQ++ +PRM+ Sbjct: 4 NLHIALAEILMDVEKELRELRLWECDALPEAALLSQQPFAIDTMSFPQWLQFIFLPRMYT 63 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 L++ + PLPG +AP E A + ++ L+++D L Sbjct: 64 LVEQQLPLPGNCGIAPMAEQYFAPLSLNTSPLIDHLQQIDRLLTR 108 >UniRef50_A6VW47 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VW47_MARMS Length = 113 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 + H + L L+ +++ W +EP S++PF +DTM +WL++V+I R Sbjct: 6 SDHHLLADLLMDLQMAMQDCDVWLCEEPTKEALQSSEPFCIDTMRFEQWLRFVMIERFKT 65 Query: 62 LLDNKQPLPGAFAVAPYYEMALATD-HPQRALILAELEKLDALFAD 106 +L LP ++P E A H + I+ L ++D + Sbjct: 66 MLATGSDLPVRCHISPMAEEAFKDKPHAKVRHIVTCLNRIDQHLSG 111 >UniRef50_B5FAV5 tRNA pseudouridine synthase C n=2 Tax=Vibrio fischeri RepID=B5FAV5_VIBFM Length = 104 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MTT + L+ L L H HW+ P +ST+PF +DT+ EWLQW+ IP+M+ Sbjct: 1 MTTSLELSTLLEQLAQQLEHHGHWQRMSPSIADLSSTEPFAIDTLSASEWLQWIFIPKMN 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 L++N +P P F++APY E AL D I+ +DAL Sbjct: 61 YLIENNKPTPKGFSIAPYIEEALK-DIEGYNEIVRLCHAIDAL 102 >UniRef50_B7S341 Conserved domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S341_9GAMM Length = 108 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 48/99 (48%) Query: 7 VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 + L +E LR+ W P ST+PF +DT+ +WLQ++ IP ++ +L+ + Sbjct: 5 IAEVLIDIEGQLRQLGMWDKIPPSSQALLSTEPFCVDTLTLPQWLQFIFIPTIYSMLEQQ 64 Query: 67 QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 + LP +AP E ++ LE++D L + Sbjct: 65 EALPERCGIAPMAEEFFRGTGLAIGELVTSLERMDELLS 103 >UniRef50_B8CQ93 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ93_SHEPW Length = 113 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 + R L ALEA L + P S PF D M +WLQ++ +P+MH +LD+ Sbjct: 5 KTRELLVALEAELAAQNLLNIESPTKEALASRAPFACDVMPFEQWLQFIFLPKMHTILDS 64 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 PLP A ++AP + + ++ ++ LD L + + Sbjct: 65 NLPLPNAISIAPMAQHVW-EYEERYQTLIGLIQALDTLLSGNG 106 >UniRef50_Q47Y02 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y02_COLP3 Length = 115 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 50/108 (46%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 T + + L L L+ W+ +P + +S PF DT+ +WLQ++ IP++ Sbjct: 5 TDPEHISTLLADLAFELKSLNLWQIPQPSAAELSSNAPFCCDTLAFGQWLQFIFIPKITM 64 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 ++ +Q LP ++ P E A ++ ++K+D A+ S Sbjct: 65 MIHQQQSLPTKISLTPMAEEAFTHLSTSAKPLIDVIQKIDKALAEKVS 112 >UniRef50_Q7N8Q5 Similar to unknown protein YqcC of Escherichia coli n=4 Tax=Enterobacteriaceae RepID=Q7N8Q5_PHOLL Length = 110 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+T ++ +LQ +E +RE W++ P+P F S +PF +D M EWLQWVLIPRM+ Sbjct: 1 MSTAKQILHKLQLIEEAMREIDLWQSHPPKPEAFESVEPFSIDRMLAEEWLQWVLIPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQ-RALILAELEKLDALFADD 107 LL+ LP AFA+APY+E + D + L LD LF D Sbjct: 61 ALLEQGLALPTAFAIAPYFEESYKEDTTGRYQQLFEHLRALDRLFMQD 108 >UniRef50_C4L9Z7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9Z7_TOLAT Length = 111 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 55/104 (52%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V L+ LE L+ Q W+++ P STQPF +DT+E +WLQ++ + R+ +L + Sbjct: 4 QVVFLLKELELTLQRLQLWQDEAPSAEALASTQPFALDTLEFHQWLQFIFLERLRFMLTD 63 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS 109 QPLP + A+ P + AL+L L +LD + + Sbjct: 64 NQPLPSSVAIYPMATEVYKKKLKEHALLLDVLARLDEALSGKPA 107 >UniRef50_A4C5J1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5J1_9GAMM Length = 106 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 48/102 (47%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 V L LE L++HQ W+ + P NS+ PF DT+ +WLQ++ IP+M L Sbjct: 2 IEQTVMHLLDNLEHNLKKHQLWQQELPSLDALNSSAPFCCDTLAFEQWLQFIFIPKMRQL 61 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 + PLP + + P E + Q +L + D LF Sbjct: 62 IALNIPLPASMTLLPMAEQSWQAKLSQYQDLLEIISGFDQLF 103 >UniRef50_A0KHF3 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KHF3_AERHH Length = 111 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 49/108 (45%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + V L L A L+ + W+ P S PF +DT+ +WLQ+VLIPRM Sbjct: 1 MNQYLLVAGLLGELTAELQRLERWQAAHPGEEALASELPFCVDTLSFDQWLQFVLIPRME 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 L+ + PLP + ++ P + + +L + + D L + Sbjct: 61 QLVLLQAPLPSSVSLYPMASEVYKEELAEVEALLRLIARFDLLLSGKV 108 >UniRef50_A0KZ33 dTDP-4-dehydrorhamnose 3,5-epimerase n=8 Tax=Shewanella RepID=A0KZ33_SHESA Length = 111 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + + +L + L+ W P ST PF D M +WLQ++ IPRM L+ Sbjct: 8 YSQTQTKLAQIAHELQSAGLWSTRAPSDEAMASTAPFACDLMSLAQWLQFIFIPRMQALI 67 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 D QPLP A+AP E ++ ++ L +LD L + Sbjct: 68 DAGQPLPSKIAIAPMAEHVW-SEQAALTPLIGVLNELDMLLNE 109 >UniRef50_Q21I39 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I39_SACD2 Length = 108 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 +++ L LE LR W+ P STQPF +DT+E +WLQ+V IPR+ L Sbjct: 4 RANQLLSLLMDLEMHLRSASLWQAQLPSQAALASTQPFCVDTLEFQQWLQFVFIPRLRVL 63 Query: 63 LDNKQPLPGAFAVAPYYEMA-LATDHPQRALILAELEKLDALFAD 106 + QPLP VAP + T RA I+ LE++DAL ++ Sbjct: 64 AETGQPLPLLCNVAPMVSDGDVFTGVNARAEIVHTLEQIDALISN 108 >UniRef50_Q1ZGZ6 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGZ6_9GAMM Length = 115 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 51/105 (48%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ L L +LE L+ W +P H NS PF +DT+ +WLQ+V I +M +L Sbjct: 9 RSQLALLLTSLECELKALDLWEASKPSEHLLNSELPFCIDTLSFPQWLQFVFIEKMKIIL 68 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 + PLP +VAP + ++ LE++D L ++ Sbjct: 69 NMAMPLPQTISVAPMATEYFTLQQLPSSPLIILLEQIDTLITENK 113 >UniRef50_Q48N70 tRNA pseudouridine synthase C (Pseudouridine synthase)(Uracil hydrolyase) n=20 Tax=Pseudomonas RepID=Q48N70_PSE14 Length = 109 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 46/100 (46%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 V QL +E LR W P S +PF +DT+E +WLQW+ +PRM +L+ Sbjct: 7 EVAEQLLLIERELRALGWWDATPPSEQALASQEPFSVDTLEFAQWLQWIFLPRMKVILER 66 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 PLP A + EM A + L+ L + D L Sbjct: 67 DLPLPNASGILEMAEMVYAGRLSETRLLQQHLARFDQLIT 106 >UniRef50_A5EWU5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWU5_DICNV Length = 113 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 48/99 (48%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +RL LQ LE L+ W+ + P S QPF +DT+ EWLQWV IP+M ++ Sbjct: 8 EMRLTLQELEQALKTIDWWQENPPPKAALASVQPFCVDTLTFTEWLQWVYIPKMLQFMEV 67 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 Q LP A + P E A + ++KLD L Sbjct: 68 YQALPAASGLLPIAEEAWKGCAESTDDLYRIVKKLDFLV 106 >UniRef50_Q085F1 Putative uncharacterized protein n=2 Tax=Shewanella RepID=Q085F1_SHEFN Length = 120 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 10 QLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPL 69 L LE LL+E Q W + P ST PF D M +WLQ++ IP+M +L+ +QPL Sbjct: 24 YLIKLEQLLKEFQLWSDTSPPVSALTSTAPFSCDVMAFEQWLQFIFIPKMTELVVQRQPL 83 Query: 70 PGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 P A+AP E H +++A+L++ D L + Sbjct: 84 PTNMALAPMAEHVWQGMHYG-DVLIAQLQQFDTLLSQ 119 >UniRef50_A8FY51 Putative uncharacterized protein n=6 Tax=Shewanella RepID=A8FY51_SHESH Length = 106 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + L LE+ LR W ++ P N + PF + M W+Q++ IP+M DL+ Sbjct: 3 YLKTTELLDKLESELRLQSLWSSENPSQEAMNDSSPFSCEAMPFENWVQFIFIPKMKDLI 62 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 D Q LP A+AP ++ ++ + LD L ++ Sbjct: 63 DRGQALPTNIAIAPMAHHVWSSKKN-LHTLILIFDNLDTLLSE 104 >UniRef50_A3JGS6 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JGS6_9ALTE Length = 114 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V +L A+E LR+ W+++ ++ S +PF +DTM +WLQ+VL+ R+ L+++ Sbjct: 13 QVADRLLAIEIQLRQMNCWQSEPLAAEKYLSREPFCLDTMSFEQWLQFVLLARLKQLVED 72 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 QPLP VAP E + ++ EL LD L Sbjct: 73 DQPLPTVSGVAPMAEEHYRSGPG--QALIRELAALDELLGAKP 113 >UniRef50_Q2NRK1 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRK1_SODGM Length = 106 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT H +VR +L +E + + + W+ P F+S +PF +DTME +WLQWVL+ RMH Sbjct: 1 MTLHQQVRQRLFDIEQAMHDAEIWQPQPPVRAAFDSVEPFCIDTMEAQQWLQWVLLQRMH 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 LLD PLP FA+ PY+E AL P+ +L +L +LD L DA Sbjct: 61 ALLDRDAPLPERFALTPYFEEAL----PEAFALLTQLRQLDCLLGGDA 104 >UniRef50_A3QGB2 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QGB2_SHELP Length = 105 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ + QL+ +EA L+ Q W++ P PF ++M +WLQ++ +P+M Sbjct: 1 MSLYTE--KQLRLIEAELKRLQLWQDQPPSAEAMADPTPFACESMTFEQWLQFIFLPKMG 58 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +++ LP A+ P E + +++ + +LD + Sbjct: 59 EIIAVNGALPSQIALTPMAEHVWQGRA-EMRVLITIINQLDEHLSG 103 >UniRef50_A1S4N1 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S4N1_SHEAM Length = 135 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 1/105 (0%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + ++ L LE L+ WR++ P S PF D + EWLQ++ +PR L Sbjct: 32 SDTKLISLLDELEQALKAALLWRDEMPTAQALASQAPFGCDLLAFEEWLQFIFLPRFRVL 91 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 L+ +QPLP A ++ P H + +L L LD Sbjct: 92 LETRQPLPAAMSILPMALHVW-GTHADKDALLIILANLDDAVNGK 135 >UniRef50_A3YDP0 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDP0_9GAMM Length = 126 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 H ++ L LE ++R+ W P S +PF +DTM +WL++V++ + +L Sbjct: 22 HHKLADLLLNLEKVMRQVNVWDMPIPSEEALTSKEPFCIDTMNFDQWLRYVMLEKFKPML 81 Query: 64 DNKQPLPGAFAVAPYYEMALAT-DHPQRALILAELEKLDALFADD 107 + Q LP + +AP + T D + I++ LE +DA D Sbjct: 82 ASGQSLPSSSCIAPMAQEFYRTQDELAKQAIVSALEAIDACLNQD 126 >UniRef50_A8H6M3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=A8H6M3_SHEPA Length = 106 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 8 RLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQ 67 R +L ALE L + P ST PF D M +WLQ++ +P+MH L+DN+ Sbjct: 7 REKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQM 66 Query: 68 PLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 PLP A ++AP E A + + ++ L +LDAL + Sbjct: 67 PLPTAISIAPMAEHVWAANI-EYKRVIQLLTELDALLS 103 >UniRef50_D1RZI2 Amelogenin n=4 Tax=Enterobacteriaceae RepID=D1RZI2_SEROD Length = 109 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 42/89 (47%), Positives = 57/89 (64%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VRL LQA+E +RE W+ P+P F ST+PF +D+M EWLQW+ +PRM+ Sbjct: 1 MSIQNQVRLSLQAIEQSMRELALWQATPPEPEAFASTEPFCVDSMLAEEWLQWIFLPRMY 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQ 89 LLD PLP FA+ PY+E AL P Sbjct: 61 ALLDAHAPLPTRFAITPYFEEALKDKDPN 89 >UniRef50_C9PR56 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PR56_9PAST Length = 125 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + +L LQ L++++ E W+ P F S +PF +DTM P EWLQW+ IPRM+ L+ Sbjct: 24 YQQTKLHLQELQSVMVELNLWQMTAPAESAFLSQEPFALDTMSPTEWLQWIFIPRMYALI 83 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 ++ PLP ++ PY E AL A +L + +++ + Sbjct: 84 ESGSPLPTKISITPYIEEALKEM-DGLAQLLRPISEIEKVL 123 >UniRef50_Q1YS95 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS95_9GAMM Length = 132 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 45/90 (50%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 T H+ + L LE LRE Q W P P ST+PF +D + EWLQ++ +PRM+ Sbjct: 3 TRHNELGNLLFELEKELREAQLWGKQSPAPEALLSTEPFSIDLLTFTEWLQFIFLPRMYA 62 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHPQRA 91 ++ + LP ++AP E + + Sbjct: 63 TIEAAEELPETCSIAPMAEQFFSAEEASLK 92 >UniRef50_Q3IIR4 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IIR4_PSEHT Length = 106 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 + + + L L ALL++HQ W+N+ S PF DTM +WLQ+V I ++ L+ Sbjct: 2 YQQTQAYLVQLRALLKKHQLWQNEPIAAEALQSNVPFCHDTMAFEQWLQFVFIEKVEQLI 61 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 +KQPLP FA+AP +M LA+ I+ L LDA + Sbjct: 62 IDKQPLPRNFAIAPMAQMTLASKK-GSGEIITLLTALDAFLGE 103 >UniRef50_D0L0X0 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0X0_HALNC Length = 119 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 + L + LRE + P ST PF DT+E WL+WV +PRM ++ Sbjct: 9 SDLFTLLDEIAYTLREIGL-NTERPSDAALASTAPFCFDTLEFHAWLEWVFLPRMQQTIE 67 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 +++ L ++AP E AT +LA L +LD Sbjct: 68 HERNLAAPCSIAPLAEYQFATYAEPTHHLLALLTELDTQIN 108 >UniRef50_B8KDN4 tRNA pseudouridine synthase C n=9 Tax=Vibrionales RepID=B8KDN4_VIBPA Length = 104 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT ++ LQ L ++R+ W+ D P + +S +PF +DT++P +WLQWV +P+M Sbjct: 1 MTKAQQLLPLLQQLPLVMRQLGLWQQDAPSTEELSSNEPFSVDTLKPEQWLQWVFLPKMT 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 L++ K PLP F+++PY+E + + P+ A +L+ L +D + Sbjct: 61 ALVEQKMPLPTGFSISPYFEESWKSC-PEYAPVLSLLVSIDEV 102 >UniRef50_A1ST62 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1ST62_PSYIN Length = 113 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 50/100 (50%) Query: 7 VRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK 66 + L ALE LR W+ +P +S +PF +D++ ++WLQ++ + +M L+ Sbjct: 14 ILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLP 73 Query: 67 QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFAD 106 QPLP V P + + A I + ++D LF++ Sbjct: 74 QPLPSGMQVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE 113 >UniRef50_B0QRS5 Anhydro-N-acetylmuramic acid kinase n=10 Tax=Pasteurellaceae RepID=B0QRS5_HAEPR Length = 104 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 6 RVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDN 65 +V+ L LE LR H W P + +PF + T+ +WLQW+ +PRMH LL+ Sbjct: 4 QVKQHLTDLEIALRVHNLWEATPPSAEALANDEPFCVSTLSATQWLQWIFLPRMHALLEA 63 Query: 66 KQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 LP FA++PY E AL D + A L KL+ L Sbjct: 64 NAELPRNFAISPYLEEALK-DLDYLQALNAPLVKLETLL 101 >UniRef50_Q57152 Uncharacterized protein HI1436 n=23 Tax=Pasteurellaceae RepID=Y1436_HAEIN Length = 106 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 4 HDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLL 63 ++ + L+ L+ +++ W+ P F S +PF +DTM EWLQWV IPRM LL Sbjct: 2 RNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALL 61 Query: 64 DNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 ++ LP A++PY E A+ + + +L L L+ L ++ Sbjct: 62 ESGSALPNKIAISPYIEEAMK-EFNELQQLLTPLVALEELXNNN 104 >UniRef50_A7N1W7 Putative uncharacterized protein n=13 Tax=Vibrionaceae RepID=A7N1W7_VIBHB Length = 133 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M T+ ++ LQ LEA L+ H+ W+ P ST+PF +DT+ P EWLQW+ I RM Sbjct: 30 MATNIQLVDLLQQLEAQLQHHELWQQTMPSAEALQSTEPFAIDTLHPHEWLQWIFIARMR 89 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 LL++ QPLP F++ PY+ A + +L + +D L Sbjct: 90 ALLESNQPLPRGFSIEPYFAEAWKQELH-YGELLETIRTIDEL 131 >UniRef50_C8NBV5 tRNA pseudouridine synthase C (TRNA-uridine isomerase C)(TRNA pseudouridylate synthase C) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBV5_9GAMM Length = 124 Score = 114 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 40/88 (45%) Query: 22 QHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEM 81 W + P S +PF +DT+ EWLQWV IP+M D + ++ LP + E Sbjct: 22 GWWGDASPDDAALTSIEPFCVDTLRFSEWLQWVYIPKMRDYIASQGALPERSGLLAIAEE 81 Query: 82 ALATDHPQRALILAELEKLDALFADDAS 109 A +L + LD L +DA+ Sbjct: 82 AWRGSAEDTRGLLLVMRALDGLVNNDAA 109 >UniRef50_A4BGS5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGS5_9GAMM Length = 102 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 52/100 (52%) Query: 5 DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLD 64 V L +AL+ W+ P P + ST PF +DT+ LEW QWV I R+ L++ Sbjct: 3 QDVCHLLDQCQALMERQNQWQTIAPLPRKLMSTAPFMVDTLSFLEWFQWVYIARLRALIE 62 Query: 65 NKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALF 104 QPLP VAPY E +L D + ++A + +LD L Sbjct: 63 AGQPLPQGALVAPYAEESLKADGAENPELIALIRQLDELI 102 >UniRef50_Q7MIF5 Putative uncharacterized protein VV2562 n=3 Tax=Vibrio RepID=Q7MIF5_VIBVY Length = 104 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT + L+ LE L+ W P+P S PF +DT+ P +WLQW+ I R+ Sbjct: 1 MTNTSTLTGLLRQLELELKRLGWWDEIPPEPALLQSEMPFAVDTLAPQQWLQWIFIARIQ 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 ++ LP F + PY+E A + +L+ L +D + Sbjct: 61 QMMAQGASLPKGFLLTPYFEEAWK-EQRDTQTLLSILRTIDEV 102 >UniRef50_Q47417 tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC Length = 376 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 35/73 (47%), Positives = 49/73 (67%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M+ ++VR L +E LRE W+ P+ FNST+PF +DTM+P EWLQWV +PRMH Sbjct: 1 MSRENQVRQSLFDIERALRESPFWQVVPPEEEAFNSTEPFSLDTMKPEEWLQWVFLPRMH 60 Query: 61 DLLDNKQPLPGAF 73 LLD++ LP ++ Sbjct: 61 ALLDSELALPRSW 73 >UniRef50_C7R8Q7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q7_KANKD Length = 112 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 4/106 (3%) Query: 1 MTTHDRVRLQL---QALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIP 57 M++ D + + +E + E + W P H+ S+ PF +DT++ EWLQ+V +P Sbjct: 1 MSSIDWLTKYIEIFDRIEEHMLELELWSESHPGHHKLQSSMPFCVDTLQLEEWLQFVFLP 60 Query: 58 RMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 +M + ++ ++ PG + P E D P+ ++ L K D + Sbjct: 61 KMREYVEEERLPPGPAQITPIAEETYK-DQPELKSLIELLRKFDEI 105 >UniRef50_Q15QZ7 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QZ7_PSEA6 Length = 118 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%) Query: 3 THDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + +V L L L+ + W P S PF D M +WLQ++ IP+M++L Sbjct: 10 SEVQVEKLLSQLAEALKTAEQWTYSPPSQWAMQSELPFACDRMGFAQWLQFIFIPKMNEL 69 Query: 63 LDNKQPLPGAFAVAPYYEMA---LATDHPQRALILAELEKLDALFAD 106 L ++PLP A+ P + T P R +L L ++D F Sbjct: 70 LQEEKPLPTRMALMPMAQEWAKEYTTGQPTREPVLDVLAQIDLAFCG 116 >UniRef50_C6YF13 tRNA pseudouridine synthase C n=30 Tax=Vibrio RepID=C6YF13_VIBCH Length = 103 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 M + + L LE LR Q W+ P S +PF +DT+ P EWLQW+ +P+M Sbjct: 1 MQFNAVLVKLLDELEVRLRAAQLWQATPPSSQALVSQEPFAVDTLLPHEWLQWIFLPKMQ 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDAL 103 + +P FA+ PY+ + +LA ++++D + Sbjct: 61 QAIAQN-AVPRGFALEPYFSEVWQGEAR-YQAVLAVIQQIDKV 101 >UniRef50_Q1QY60 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY60_CHRSD Length = 108 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 1/107 (0%) Query: 1 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH 60 MT+H+ + L+ L A LR WR +EP F+S QPF +DTME +WL++V + R+ Sbjct: 1 MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLE 60 Query: 61 DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILA-ELEKLDALFAD 106 L + + PLP +VAP + L P ++ + ++D + + Sbjct: 61 TLAETEAPLPATCSVAPAIDTWLKEASPSVRRVVTEAVAEVDRIVTE 107 >UniRef50_Q6LN18 Putative uncharacterized protein VV2562 n=5 Tax=Vibrionaceae RepID=Q6LN18_PHOPR Length = 106 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 19 REHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPY 78 R + W + P S +PF +DT+ +WLQW+ IPRM L+ KQPLP F ++PY Sbjct: 19 RNAERWESAPPSNTALASAEPFAVDTLSCSQWLQWIFIPRMTQLIALKQPLPQHFELSPY 78 Query: 79 YEMALATDHPQRALILAELEKLDALF 104 E A+ D +IL +LD LF Sbjct: 79 VEEAMKHDS-GVNIILGVTRELDNLF 103 >UniRef50_A9BUM5 Putative uncharacterized protein n=3 Tax=Comamonadaceae RepID=A9BUM5_DELAS Length = 132 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 2 TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHD 61 TTH ++ QLQ LE LR W P P ST PF DT++ EWLQWV +PR+ Sbjct: 15 TTHQKLLDQLQQLEDELRSQSLWSAVAPSPEAMASTMPFMYDTLKLQEWLQWVFLPRLRA 74 Query: 62 LLDNKQPLPGAFAVAPYYEMALATDHP-QRALILAELEKLDALFADDA 108 ++D + LP V P E + + +L L +D Sbjct: 75 VVDARGQLPCQSHVHPLAEHEWSQPVAFDKRQLLVLLLGIDDTLNQGG 122 >UniRef50_A6CX08 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CX08_9VIBR Length = 98 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 21 HQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYE 80 H W+ EP +S QPF +DT+EP EWLQWV I R+ +++ QPLP F +APY+E Sbjct: 15 HALWQAQEPTASAMSSQQPFSVDTLEPHEWLQWVFIQRIESMIEMGQPLPKGFEIAPYFE 74 Query: 81 MALATDHPQRALILAELEKLDA 102 P+ I+ L+KLD Sbjct: 75 EVWKLR-PEYQEIILVLKKLDD 95 >UniRef50_Q1IMW6 tRNA pseudouridine synthase C n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMW6_ACIBL Length = 106 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Query: 1 MTTH---DRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIP 57 M H + + +EA ++ +W+ + Q+ Q F MDTM +WLQ+ +P Sbjct: 1 MNKHKLAEECAEAVDKIEAEMKRIGYWQEAPLREEQYGFQQAFAMDTMTYAQWLQFAFLP 60 Query: 58 RMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 R+ + + ++Q P + V D ++ L DALF+ Sbjct: 61 RVREAITSQQ-FPKSSDVGTQAIREFDGDINASG-LVTRLCDFDALFS 106 >UniRef50_B4RVQ0 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RVQ0_ALTMD Length = 112 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 7 VRLQLQALEALLREHQHWRNDEPQ----PHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDL 62 + L LE +++E W + +P ST PF +D++ WL ++ IP+M + Sbjct: 10 LSEALDNLEVIMQEEGIWPDAKPTRKALDSALQSTVPFAVDSLPFESWLAFIFIPKMRII 69 Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDA 108 + KQ LP + P ++ L + +A+L+ +D + ++ Sbjct: 70 IAQKQTLPA-MQITPAAQVYLNGIGHRT---IAQLQTIDDIASEKG 111 >UniRef50_A4NFL7 Thiamine biosynthesis protein ThiI n=1 Tax=Haemophilus influenzae PittAA RepID=A4NFL7_HAEIN Length = 85 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Query: 26 NDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALAT 85 ND P F S +PF +DTM EWLQWV IPRM LL++ LP A++PY E A+ Sbjct: 3 NDAPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEAMK- 61 Query: 86 DHPQRALILAELEKLDALFADD 107 + + +L L L+ L ++ Sbjct: 62 EFDELQQLLTPLVALEELLNNN 83 >UniRef50_B4SIW0 Putative uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIW0_STRM5 Length = 119 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 5/101 (4%) Query: 8 RLQLQALEALLREHQHWRNDEPQPHQFNSTQPF-FMDTMEPLEWLQWVLIPRMHDLLDNK 66 + +E LR + P S F D M +WL V +PR+H+ Sbjct: 17 AALVVPIEQALRALGWVVGEVGPPRAVTSA--FGSDDGMPFEQWLAQVFLPRLHEARAAG 74 Query: 67 QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADD 107 Q P VA L P +L L +LD Sbjct: 75 Q-WPPRSDVAVAAWRNLDG-QPGVESLLRLLAQLDERINKG 113 >UniRef50_C5BNG7 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNG7_TERTT Length = 45 Score = 56.7 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%) Query: 63 LDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFA 105 ++N PLP VAP E A +L L KLD + + Sbjct: 1 MNNGAPLPDKCGVAPMAEEYFRGQQRDIAGLLGSLNKLDEVLS 43 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.159 0.542 Lambda K H 0.267 0.0492 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 830,953,381 Number of Sequences: 3077464 Number of extensions: 37872056 Number of successful extensions: 88752 Number of sequences better than 1.0e-01: 63 Number of HSP's better than 0.1 without gapping: 185 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 88535 Number of HSP's gapped (non-prelim): 187 length of query: 109 length of database: 1,040,396,356 effective HSP length: 77 effective length of query: 32 effective length of database: 803,431,628 effective search space: 25709812096 effective search space used: 25709812096 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 88 (38.2 bits)