Phyre 2 alignment of Q46919 with d2bpa1_

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Job Description | Q46919
Confidence | 1.97% | Date | Thu Jan 5 12:35:52 GMT 2012
Rank | 67 | Aligned Residues | 18
% Identity | 33% | Template | d2bpa1_
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins) | ssDNA viruses | Microviridae-like VP
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | E | W | L | Q | W | V | L | I | P | R | M | H | D | L | L | D | N | K | Q | P | L | P | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | E | Q | W | I | K | F | . | . | . | . | . | M | K | D | G | V | N | A | T | . | P | L | P | T
Template Known Secondary structure |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  | G | G | G |  |  | . |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 79 | 80 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 90 | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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