 |
| Job Description | Q46919 | | Confidence | 2.87% | Date | Thu Jan 5 12:35:52 GMT 2012 |
| Rank | 42 | Aligned Residues | 45 |
| % Identity | 11% | Template | c2dbgA_ |
| PDB info |
PDB header:immune system | Chain: A: PDB Molecule:myeloid cell nuclear differentiation antigen; |
PDBTitle: solution structure of the pyrin (paad-dapin) domain in2 human myeloid cell nuclear differentiation antigen
|
| Resolution | UNK |
|
|   |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | M | H | D | L | L | D | N | K | Q | P | L | P | G | . |
. |
. |
. |
. |
. |
. |
A | F | A | V | A | P | Y | Y | E | M | A | L | A | T | D | H | P | Q | R | A | L | I | L | A | E | L | E | K | L | D | A | L |
| Query Conservation |   |
|
|   |   |
|
|
|   |   |   |
|
|
|   | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
| . |   |
|   |
|
|
|   |
|   |
|   |
|   |   |
|
| Template Sequence |   |
S | I | K | S | L | L | A | Y | D | L | G | L | T | T | K | M | Q | E | E | Y | N | R | I | K | I | T | D | L | M | E | K | K | F | Q | G | V | A | . |
C | L | D | K | L | I | E | L | A | K | D | M | P | S | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |  | . |  |  |  |  |  |  |  |  | T | S | S |
| G | G | G |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|