111 c3mi6A_ Probab=99.09   E-value=1.7e-06  Score=62.81  Aligned_columns=312  Identities=15%

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             599998758889975998999867-8888899875646122147443899999999999999898899997013016877
Q batch____       178 DLDGISEKLPYLKKLGVTALYLNP-VFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSH  256 (604)
Q Consensus       178 dl~Gi~~kLdYLk~LGv~~i~L~P-i~~~~~~~GY~~~dy~~id~~~Gt~~dfk~LV~~~H~~Gi~VilD~V~NH~~~~~  256 (604)
                      |...+.+-++-.++||+....|=- .|....++--...|+..-..+|..  .|+.|++.+|++||+--|=+-+--++.++
T Consensus       344 ~~~~l~~la~~Aa~lG~E~fVlDDGWf~~r~dd~~~LGDW~~~~~kfP~--Gl~~l~d~v~~~Gm~fGlW~EPEmV~~~S  421 (742)
T c3mi6A_         344 NEAKLXTIVNQAKRLGIEXFVLDDGWFGHRDDDTTSLGDWFVDQRKFPD--GIEHFSQAVHQQGXKFGLWFEPEXVSVDS  421 (742)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCTT--HHHHHHHHHHHTTCEEEEEECTTEECSSS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEECHHHCCC--CHHHHHHHHHHCCCCCEEEECHHHCCCCC
T ss_conf             8999999999998769719997022236888853224312447658288--27999999997398324875013258873


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             55541256666555787777654204568987022257577513378799999999998999999997652699779964
Q batch____       257 AWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLD  336 (604)
Q Consensus       257 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpdln~~~~~vr~~l~~~~~~~~~~Wl~e~~gvDGfR~D  336 (604)
                      ..+++++.|............++-+.                  ||..+|+||+++++.+..++.     ++|||.+..|
T Consensus       422 ~ly~~HPDw~l~~~~~~~~~~r~q~v------------------LDl~~P~v~~~i~~~i~~ll~-----e~gidYiKwD  478 (742)
T c3mi6A_         422 DLYQQHPDWLIHAPKSTPTPGRHQFV------------------LDXARPEVVDYLFKLXSQXIE-----SANLDYIKWD  478 (742)
T ss_dssp             SHHHHCGGGBCCCTTCCCCCSSSCEE------------------BCTTCHHHHHHHHHHHHHHHH-----HHTCSEEEEC
T ss_pred             HHHHHCCCEEEECCCCCCCCCCCEEE------------------EECCCHHHHHHHHHHHHHHHH-----HCCCCEEEEC
T ss_conf             78885964168638974013575289------------------857888999999987888877-----5497259960


Q ss_pred             CHHHCCCCCCCC-----------CCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf             854244556765-----------536899999998655379669996026871676500355643243221138999861
Q batch____       337 VVHMLGEAGGAR-----------NNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLA  405 (604)
Q Consensus       337 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~p~~~ligE~~~~~~~~~~~~~~d~~~~~~~f~~~~~~~~~  405 (604)
                      .-..+.......           ....-+-.+.+.+++..|++++=.=..+..+                ++..+.....
T Consensus       479 ~Nr~~~~~~~~~~~~~~~~~~~~~~~~g~y~~ld~L~~~~P~v~iE~CssGGgR----------------~D~g~l~~~~  542 (742)
T c3mi6A_         479 XNRYATEXFSSRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLFESCASGGGR----------------FDLGXXYYAP  542 (742)
T ss_dssp             CCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEECSTTTSS----------------CSHHHHHHSS
T ss_pred             CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC----------------CCHHHHCCCC
T ss_conf             665301014566764322025899999999999999875897499921488754----------------4726640276


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHC
Q ss_conf             42000134567999999999999874587652101551257776443201268699999999999980882499768101
Q batch____       406 NTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEV  485 (604)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~hD~~r~~~~~~~~~~~~~~a~~~llt~pG~P~iyyG~E~  485 (604)
                      .....   ...++.+-..........++.......+.-..+|.+.|...          +..-+..++-|...+=     
T Consensus       543 ~~w~S---D~tda~~R~~Iq~g~s~~~P~~~~~~hv~~~p~h~t~r~~~----------l~~r~~val~g~~g~~-----  604 (742)
T c3mi6A_         543 QAWTS---DDTDAAERLLIQFGTSYGYPQAXXGAHVSAVPNDQXGRITS----------LKTRGAVAFFGDLGYE-----  604 (742)
T ss_dssp             EEECC---SCCCHHHHHHHHHHHTTTSCGGGEEEEEECSSCTTTCCCCC----------HHHHHHHHTSSEEEEE-----
T ss_pred             EEECC---CCCCHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCCCC----------HHEEEHHHHCCCCCCC-----
T ss_conf             12107---77455468998708311478556123120077644465431----------0000012210342120-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-HHHCCCCEEEEEC----CCCEEE--EEEEECCEEEEEEEE
Q ss_conf             558976832247688121355517999999999998868-3231685799972----799799--999848927999998
Q batch____       486 GLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKS-QALRHGGCQVLYA----EDNVVV--FVRVLNQQRVLVAIN  558 (604)
Q Consensus       486 g~~~~~d~~~r~~~~W~~~~~~~~l~~~~k~Li~lRk~~-~aL~~g~~~~~~~----~~~v~a--f~R~~~~~~~lV~~N  558 (604)
                                     ++-.....+..+.+|+.|++.|++ +.++.|.+.-+..    +.+..+  +....+++.++++++
T Consensus       605 ---------------~dl~~l~~~e~~~l~~~i~~yK~~R~ll~~G~~~rl~~p~~~~~~~~a~~~v~~d~~~~v~~~~~  669 (742)
T c3mi6A_         605 ---------------LDITKXAPTELDQVKKQVAFYKCYRQLFQFGKFYRIDSPFVEDGNVTSWQVVSDDQKQAIAARYQ  669 (742)
T ss_dssp             ---------------SCSTTCCHHHHHHHHHHHHHHHHTHHHHHHSEEEECSCTTSTTCCEEEEEEECTTSSEEEEEEEE
T ss_pred             ---------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEE
T ss_conf             ---------------20110899899999999999886507776455898406677887723999997788869999997


Q ss_pred             CCCCC
Q ss_conf             88996
Q batch____       559 RGEAC  563 (604)
Q Consensus       559 ~~~~~  563 (604)
                      .....
T Consensus       670 ~~~~~  674 (742)
T c3mi6A_         670 LLNHP  674 (742)
T ss_dssp             SSCCS
T ss_pred             CCCCC
T ss_conf             16788