334 c1rktA_ Probab=52.67   E-value=7.6  Score=18.29  Aligned_columns=47  Identities=17%

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf             98887689998999999999999868999898389899999956991789
Q batch____         2 PGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPV   51 (221)
Q Consensus         2 ~~~~~~~~~sl~e~i~~~l~~~I~~g~~~~G~~Lpe~eLa~~~gVSr~~v   51 (221)
                      |.+++-++...+++|.+.-...+....|.   .++-+++|+.-|||++++
T Consensus         2 Pr~~~~~~~~~r~~Il~aA~~lf~~~G~~---~~si~~Ia~~agvs~~ti   48 (204)
T c1rktA_           2 PKVTKEHKDKRQAEILEAAKTVFKRKGFE---LTTXKDVVEESGFSRGGV   48 (204)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHCST---TCCHHHHHHHHTSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHCHH---CCCHHHHHHHHCCCHHHH
T ss_conf             77798999999999999999999961920---088999999958999997