54 c3sp1B_ Probab=98.05   E-value=0.00011  Score=46.95  Aligned_columns=212  Identities=17%

Q ss_pred             CCCEEEE-EECCC--CCHHHHHHHHHHH----HHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9956998-23589--8512076799999----999999879819999703234138999983000269999999999999
Q batch____        32 GPIALYC-GFDPT--ADSLHLGHLVPLL----CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKI  104 (424)
Q Consensus        32 ~~~~~Y~-G~dPT--~~sLHlGhlv~i~----~l~~~q~~G~~~~~ligd~ta~igDPsg~~~eR~~l~~e~i~~n~~~i  104 (424)
                      +++++|+ |  ||  ++ +||||+-+.+    ..|.++..|++|.++.+.  .=++|..            ...+.++.+
T Consensus        21 ~~v~~YvcG--PTvy~~-~HIGhar~~v~~Dvl~R~lr~~G~~V~~v~~i--TDid~ki------------~~~e~~~~~   83 (439)
T c3sp1B_          21 ENVKVYACG--PTVYNY-AHIGNFRTYIFGDLLIKTLRFLGYKVNYAMNI--TDIGHGL------------TVYEISEFF   83 (439)
T ss_dssp             SCEEEEECC--CBSSSC-CCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE--BCSCCCC------------CHHHHHHHH
T ss_pred             CEEEEEEEC--CCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC--CCHHCCC------------CHHHHHHHH
T ss_conf             600799715--864884-44110288999999999999679818999705--6223398------------999999999


Q ss_pred             HHHHHHHHH-CCCCCCEEEEEECHHHCCCCCHHHHHHH----HHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH-----
Q ss_conf             999999981-7888670899967155143658999998----752373999960023888850357887389989-----
Q batch____       105 RKQVAPFLD-FDCGENSAIAANNYDWFGNMNVLTFLRD----IGKHFSVNQMINKEAVKQRLNREDQGISFTEFS-----  174 (424)
Q Consensus       105 ~~q~~~il~-~~~~~~~~~iv~nsdw~~~~~~~~~l~~----~g~~~tv~~ml~~~~vk~R~~~~~~gls~~ef~-----  174 (424)
                      ......-++ +++.+..........--.-..++.-|.+    +.+.-.+-.-.+...--.++.....--+-..|.     
T Consensus        84 ~~~f~~~~~~L~i~~~~~~~r~teh~~~i~~~i~~L~~~G~aY~~~~~v~f~v~~~~~yg~ls~~~~K~~~~DF~Lwk~~  163 (439)
T c3sp1B_          84 TEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIKFKRNKTDFVLWFTN  163 (439)
T ss_dssp             HHHHHHHHHHTTCCCCSEEEEGGGCHHHHHHHHHHHHHTTCEEEETTEEEECGGGCTTTTGGGCCCCSSSTTCEEEEEEC
T ss_pred             HHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEHHHCCCCCHHCCCCCCCCCCCCCCCCCC
T ss_conf             99999999972889984540044017999999999997798464028574012130010031088432472210123233


Q ss_pred             --------------------HHHHHHHHHHHHHCCCCCEEEEEEEC-HHHHHHHHHHHHHHCCCCCC--EEEEECCCCCC
Q ss_conf             --------------------88887433898621689715663101-18999999999996089872--89983421378
Q batch____       175 --------------------YNLLQGYDFACLNKQYGVVLQIGGSD-QWGNITSGIDLTRRLHQNQV--FGLTVPLITKA  231 (424)
Q Consensus       175 --------------------YpllQa~D~~~L~~~~~v~iqiGG~D-Q~gni~~g~dl~~k~~~~~~--~~lt~PLL~~~  231 (424)
                                          |.+=-++=..+...+ .+.|.+||.| -.+|...-+-...-.+.+++  +-++.-.|. .
T Consensus       164 ~~~~~~~~~~~spWG~grPgWhiec~A~~~~~~g~-~~DIH~gG~Dl~fpHh~~~~a~~~a~~~~~~~~~~~h~g~l~-~  241 (439)
T c3sp1B_         164 SKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKD-ALDIHLGGVDHIGVHHINEIAIAECFLNKKWCDVFVHGEFLI-M  241 (439)
T ss_dssp             SCCCTTCCCBCCTTCSEEECHHHHHHHHHHHHHTT-CCCEEEEEGGGTTTHHHHHHHHHHHHHTSCCCSEEEEECCEE-S
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHCCC-CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEE-E
T ss_conf             44547997115788876883114411110122388-753789704113651368999997378998775999571788-5


Q ss_pred             CCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf             997243346881572387789879864771589
Q batch____       232 DGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTA  264 (424)
Q Consensus       232 dG~KmsKS~gnaIwLd~~~tsp~~~yq~~~n~~  264 (424)
                      +|+|||||.+|.+...  .-+|-.+--|+++.+
T Consensus       242 ~g~KMSks~~~~~~~~--~~~~d~lR~~ll~~~  272 (439)
T c3sp1B_         242 DYNKMSFITVKDLEDQ--NFSPLDFRYLCLTSH  272 (439)
T ss_dssp             SSSBCCCCCHHHHHHT--TCCHHHHHHHHHTSC
T ss_pred             ECCCCCEEEHHHHHHC--CCCHHHHHHHHHHCC
T ss_conf             0785312461233341--688999999998379