 |
| Job Description | Q47083 | | Confidence | 90.55% | Date | Thu Jan 5 12:36:11 GMT 2012 |
| Rank | 194 | Aligned Residues | 53 |
| % Identity | 23% | Template | d1j5ya1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Biotin repressor-like
|
| Resolution | 2.30 |
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | Q | L | K | I | I | R | E | A | A | R | Q | D | Y | . |
. |
N | L | T | E | V | A | N | M | L | F | T | S | Q | S | G | V | S | R | H | I | R | E | L | E | D | E | L | G | I | E | I | F | V | R | R | G | K | R | L | L | G | M |
| Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |   |
| . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   | . |
|   |   |
|   |   |   | . | . |   |   |
|
|   |
|
| Template Sequence |   |
R | L | K | S | I | V | R | I | L | E | R | S | K | E | P | V | S | G | A | Q | L | A | E | E | L | S | V | S | R | Q | V | I | V | Q | D | I | A | Y | L | R | S | L | . |
G | Y | N | I | V | A | T | . |
. |
P | R | G | Y | V | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| S | S |
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
|
|
|  |  |  | . | . | T | T |  |  |  |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  | . | . |
|
|
|  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | |
|
. | 60 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|