BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (340 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bac... 572 e-162 UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteob... 519 e-146 UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ... 271 3e-71 UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepI... 251 2e-65 UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostri... 244 5e-63 UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport... 219 8e-56 UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding... 203 7e-51 UniRef50_Q0S9A1 Possible sugar transporter, solute binding compo... 181 3e-44 UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1... 181 4e-44 UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-b... 173 9e-42 UniRef50_A7BAM4 Putative uncharacterized protein n=1 Tax=Actinom... 170 9e-41 UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria Rep... 166 1e-39 UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-b... 164 6e-39 UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostri... 162 2e-38 UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protei... 162 2e-38 UniRef50_C7Q7X0 Rhamnose ABC transporter, periplasmic rhamnose-b... 158 2e-37 UniRef50_Q0FYN9 Probable sugar ABC transporter, substrate-bindin... 155 2e-36 UniRef50_C1YUW3 Monosaccharide ABC transporter substrate-binding... 153 8e-36 UniRef50_C8SFB0 ABC-type sugar transport system periplasmic comp... 153 1e-35 UniRef50_C6BA29 Rhamnose ABC transporter, periplasmic rhamnose-b... 142 2e-32 UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostri... 141 3e-32 UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-bindin... 130 5e-29 UniRef50_A9H7R1 Putative exported protein n=2 Tax=Gluconacetobac... 116 1e-24 UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding... 115 3e-24 UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostri... 114 7e-24 UniRef50_B8G8A7 ABC-type sugar transport system periplasmic comp... 113 8e-24 UniRef50_A9BS22 Putative ABC transporter periplasmic sugar-bindi... 103 6e-21 UniRef50_C0E8U4 Putative uncharacterized protein n=1 Tax=Clostri... 103 1e-20 UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostri... 102 2e-20 UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kri... 99 3e-19 UniRef50_B7R620 Periplasmic binding proteins and sugar binding d... 98 5e-19 UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotro... 97 6e-19 UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria Re... 96 2e-18 UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding... 94 5e-18 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 94 8e-18 UniRef50_C5EPZ5 Putative uncharacterized protein n=1 Tax=Clostri... 94 8e-18 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 92 2e-17 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 92 2e-17 UniRef50_Q1M9D2 Putative substrate-binding component of ABC tran... 91 7e-17 UniRef50_A9KIX1 Putative sugar ABC transporter, substrate-bindin... 90 1e-16 UniRef50_A8RTG6 Putative uncharacterized protein n=1 Tax=Clostri... 89 3e-16 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 88 6e-16 UniRef50_A6X767 Periplasmic binding protein/LacI transcriptional... 87 7e-16 UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostri... 87 7e-16 UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter... 84 5e-15 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 84 7e-15 UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostri... 84 8e-15 UniRef50_Q2RRZ3 Periplasmic binding protein/LacI transcriptional... 83 1e-14 UniRef50_A9R0Y3 Carbohydrate uptake ABC transporter 2 (CUT2) fam... 82 2e-14 UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=... 82 2e-14 UniRef50_A7B0G4 Putative uncharacterized protein n=1 Tax=Ruminoc... 82 3e-14 UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bry... 82 3e-14 UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter... 79 2e-13 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 79 3e-13 UniRef50_C9D206 ABC transporter, substrate binding protein n=2 T... 78 4e-13 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 77 9e-13 UniRef50_A5FYX5 ABC-type sugar transport system periplasmic comp... 76 2e-12 UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotro... 74 6e-12 UniRef50_A1SLY7 ABC sugar transporter, periplasmic ligand bindin... 74 7e-12 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 73 1e-11 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 72 3e-11 UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic com... 72 4e-11 UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional... 71 5e-11 UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 T... 70 1e-10 UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional... 69 2e-10 UniRef50_A9GIG1 ABC-type sugar transport system, periplasmic com... 69 2e-10 UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional... 69 3e-10 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 68 5e-10 UniRef50_Q92L85 Putative periplasmic binding ABC transporter n=1... 66 1e-09 UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional... 66 2e-09 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 66 2e-09 UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5... 65 3e-09 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 65 3e-09 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 65 5e-09 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 64 9e-09 UniRef50_C6WPU6 Periplasmic binding protein/LacI transcriptional... 64 1e-08 UniRef50_UPI0001C368C5 ABC sugar transporter, periplasmic bindin... 64 1e-08 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 63 1e-08 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 63 2e-08 UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Br... 63 2e-08 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 62 2e-08 UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional... 62 4e-08 UniRef50_A8F7U7 Periplasmic binding protein/LacI transcriptional... 62 4e-08 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 62 4e-08 UniRef50_A3DI69 ABC-type sugar transport system periplasmic comp... 61 5e-08 UniRef50_C7IMM2 Periplasmic binding protein/LacI transcriptional... 61 5e-08 UniRef50_B8I3I9 Periplasmic binding protein/LacI transcriptional... 61 6e-08 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 61 7e-08 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 60 8e-08 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 60 1e-07 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 60 1e-07 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 60 1e-07 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 60 1e-07 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 59 2e-07 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 59 2e-07 UniRef50_A3DCF2 Sugar ABC transporter (Sugar-binding protein) n=... 59 2e-07 UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional... 59 2e-07 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 59 3e-07 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 59 3e-07 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Di... 58 4e-07 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 58 4e-07 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 58 6e-07 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 57 7e-07 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 57 9e-07 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 57 1e-06 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 57 1e-06 UniRef50_C0CMP2 Putative uncharacterized protein n=1 Tax=Blautia... 57 1e-06 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 56 2e-06 UniRef50_A3K5X2 Putative periplasmic binding abc transporter pro... 56 2e-06 UniRef50_A9D042 Sugar ABC transporter, periplasmic sugar-binding... 56 2e-06 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 56 2e-06 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 55 3e-06 UniRef50_A9KSH9 Periplasmic binding protein/LacI transcriptional... 55 3e-06 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 55 3e-06 UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales b... 55 3e-06 UniRef50_UPI0001C358B9 putative sugar ABC transporter, substrate... 55 4e-06 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 55 5e-06 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 54 5e-06 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 54 6e-06 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 54 6e-06 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 54 6e-06 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 54 6e-06 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 54 7e-06 UniRef50_Q0SII4 ABC ribose transporter, substrate-binding compon... 54 8e-06 UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional... 54 1e-05 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 54 1e-05 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 53 1e-05 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 53 2e-05 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 53 2e-05 UniRef50_UPI0001973330 periplasmic binding protein/LacI transcri... 53 2e-05 UniRef50_A1WIH3 Periplasmic binding protein/LacI transcriptional... 52 2e-05 UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional... 52 2e-05 UniRef50_B6A0F4 Periplasmic binding protein/LacI transcriptional... 52 2e-05 UniRef50_B9Z651 Periplasmic binding protein/LacI transcriptional... 52 3e-05 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 52 3e-05 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 52 4e-05 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 52 4e-05 UniRef50_A6TS00 Periplasmic sugar-binding protein n=1 Tax=Alkali... 51 5e-05 UniRef50_C5CYD2 Sugar ABC transporter n=17 Tax=Proteobacteria Re... 51 5e-05 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 51 6e-05 UniRef50_Q1IUK1 Transcriptional regulator, LacI family n=2 Tax=C... 51 6e-05 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 51 6e-05 UniRef50_C5V4K8 Periplasmic binding protein/LacI transcriptional... 51 7e-05 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 50 9e-05 UniRef50_C0CKI5 Putative uncharacterized protein n=1 Tax=Blautia... 50 9e-05 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 50 1e-04 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 50 1e-04 UniRef50_C7PZQ0 Sugar ABC transporter, periplasmic sugar-binding... 50 1e-04 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 50 1e-04 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 50 1e-04 UniRef50_A1SDR2 Putative sugar ABC transporter, substrate-bindin... 50 1e-04 UniRef50_A5CP31 Putative sugar ABC transporter, solute-binding p... 50 1e-04 UniRef50_Q2K9A4 Ribose ABC transporter, substrate-binding protei... 50 1e-04 UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Ta... 50 1e-04 UniRef50_P77269 ABC transporter periplasmic-binding protein yphF... 50 1e-04 UniRef50_Q9R6G3 Tiorf96 protein n=1 Tax=Agrobacterium tumefacien... 50 2e-04 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 50 2e-04 UniRef50_C7LYX4 Periplasmic binding protein/LacI transcriptional... 50 2e-04 UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional... 50 2e-04 UniRef50_C0C5Y6 Putative uncharacterized protein n=1 Tax=Clostri... 49 2e-04 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 49 2e-04 UniRef50_B5I626 Putative uncharacterized protein n=1 Tax=Strepto... 49 2e-04 UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=... 49 2e-04 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 49 3e-04 UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax... 49 3e-04 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 49 3e-04 UniRef50_C0C2G7 Putative uncharacterized protein n=1 Tax=Clostri... 49 3e-04 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 49 4e-04 UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostri... 48 4e-04 UniRef50_C2L0C0 Ribose ABC superfamily ATP binding cassette tran... 48 4e-04 UniRef50_C0XA52 Periplasmic sugar-binding protein n=3 Tax=Lactob... 48 5e-04 UniRef50_UPI0001C31B7A ABC-type sugar transport system periplasm... 48 5e-04 UniRef50_D0BM84 Periplasmic binding protein/LacI transcriptional... 48 5e-04 UniRef50_B2JMA8 Putative simple sugar transport system substrate... 48 5e-04 UniRef50_C0CRA5 Putative uncharacterized protein n=1 Tax=Blautia... 48 5e-04 UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional... 48 6e-04 UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional... 47 7e-04 UniRef50_B1G5Z1 ABC sugar transporter, periplasmic ligand bindin... 47 7e-04 UniRef50_C0BXQ7 Putative uncharacterized protein n=1 Tax=Clostri... 47 7e-04 UniRef50_D1N9K7 Periplasmic binding protein/LacI transcriptional... 47 8e-04 UniRef50_A3QHG3 Sugar-binding protein, putative n=8 Tax=Gammapro... 47 0.001 UniRef50_C3KNR3 Ribose ABC transporter, ribose-binding protein n... 47 0.001 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 47 0.001 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 47 0.001 UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional... 47 0.001 UniRef50_C0RJU8 Periplasmic binding protein/LacI transcriptional... 47 0.001 UniRef50_C1F7H1 D-ribose-binding periplasmic protein, putative n... 47 0.001 UniRef50_Q1IJE4 ABC sugar transporter, periplasmic ligand bindin... 46 0.001 UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional... 46 0.002 UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostri... 46 0.002 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 46 0.002 UniRef50_B1KAQ4 Periplasmic binding protein/LacI transcriptional... 46 0.002 UniRef50_A7NMH5 ABC-type sugar transport system periplasmic comp... 46 0.002 UniRef50_B0K612 ABC-type sugar transport system periplasmic comp... 46 0.002 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 46 0.002 UniRef50_UPI0001C31F5B ABC-type sugar transport system periplasm... 45 0.003 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 45 0.003 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 45 0.003 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 45 0.003 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 45 0.003 UniRef50_Q16BW0 Ribose ABC transporter, periplasmic binding comp... 45 0.003 UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=P... 45 0.003 UniRef50_B1ZWL5 Putative D-ribose-binding periplasmic protein n=... 45 0.003 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 45 0.004 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 45 0.004 UniRef50_B5K960 ABC transporter, periplasmic sugar binding prote... 45 0.004 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.004 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 45 0.005 UniRef50_C5EPY5 ABC-type sugar transport system n=2 Tax=Clostrid... 45 0.005 UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enter... 45 0.005 UniRef50_C2S5M5 Periplasmic binding protein/LacI transcriptional... 45 0.005 UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.005 UniRef50_C5EKG2 Periplasmic binding protein/LacI transcriptional... 45 0.005 UniRef50_D0LF96 Periplasmic binding protein/LacI transcriptional... 45 0.005 UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Ba... 44 0.006 UniRef50_B9R3G3 Periplasmic binding proteins and sugar binding d... 44 0.007 UniRef50_B7S4D1 Predicted protein n=3 Tax=Phaeodactylum tricornu... 44 0.007 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 44 0.007 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 44 0.007 UniRef50_C1SFQ0 Monosaccharide ABC transporter substrate-binding... 44 0.007 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 44 0.008 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 44 0.008 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 44 0.008 UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional... 44 0.008 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 44 0.008 UniRef50_C7MPN6 Monosaccharide-binding protein n=3 Tax=Actinomyc... 44 0.008 UniRef50_A9KIC8 Periplasmic binding protein/LacI transcriptional... 44 0.008 UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaeros... 44 0.008 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 44 0.009 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 44 0.009 UniRef50_C5EMQ0 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.009 UniRef50_C0C4T0 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.010 UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional... 44 0.010 UniRef50_D2B1D0 ABC-type sugar transport system periplasmic comp... 44 0.011 UniRef50_B0NGB0 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.012 UniRef50_B5WQM1 Periplasmic binding protein/LacI transcriptional... 44 0.012 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 43 0.013 UniRef50_D2R6L4 ABC-type sugar transport system periplasmic comp... 43 0.013 UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia... 43 0.013 UniRef50_B5ZRZ8 Periplasmic binding protein/LacI transcriptional... 43 0.014 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 43 0.014 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 43 0.014 UniRef50_C6JBS1 Periplasmic binding protein/LacI transcriptional... 43 0.014 UniRef50_UPI0001C3204B ABC-type sugar transport system periplasm... 43 0.014 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 43 0.015 UniRef50_UPI00016C365A Ribose transporter, periplasmic binding p... 43 0.015 UniRef50_B5WJQ1 Ribose ABC transporter, periplasmic binding prot... 43 0.015 UniRef50_A9D050 RbsB protein n=2 Tax=Alphaproteobacteria RepID=A... 43 0.017 UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding... 43 0.017 >UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bacteria RepID=LSRB_YERE8 Length = 344 Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust. Identities = 291/344 (84%), Positives = 308/344 (89%), Gaps = 4/344 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMN----VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 M R KK+AL+ ALG A I+ + VQAAERIAFIPKLVGVGFFTSGG GA AGKEL Sbjct: 1 MKTPRLKKLALVCALGFACITFSAINAVQAAERIAFIPKLVGVGFFTSGGKGAVDAGKEL 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI+VSAVSPDGLCPALKRAMQRGV++LTWD Sbjct: 61 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWD 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SDTKPECRS YINQGTP QLG MLVDMAA QV KDKAKVAFFYSSPTVTDQNQWV EAK Sbjct: 121 SDTKPECRSVYINQGTPNQLGSMLVDMAANQVKKDKAKVAFFYSSPTVTDQNQWVNEAKK 180 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 KI +EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK Sbjct: 181 KIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 240 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 D VAIVGFSTPNVMRPYVERGTVKEFGLWDVV QGKISVYVA+ +LKKG + GDK+DI Sbjct: 241 RDNVAIVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDI 300 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 +G VEV+PNSVQGYD+EA G+GIVLLP+RVIF KENI KYDF Sbjct: 301 PNIGVVEVAPNSVQGYDHEAKGSGIVLLPQRVIFTKENIDKYDF 344 >UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteobacteria RepID=C9R4N9_AGGAD Length = 365 Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust. Identities = 261/335 (77%), Positives = 291/335 (86%), Gaps = 1/335 (0%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 F AL LG++ ++ Q+A+RIAFIPKLVGVGFFTSGG GA + GK L VDVTYDGP Sbjct: 32 FFVTALSVLLGLSVVA-TAQSADRIAFIPKLVGVGFFTSGGQGATEMGKTLSVDVTYDGP 90 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 TEPSV QVQLINNFVNQGYNAI+VSAVSPDGLC L+RAM+RGV+VLTWDSDTKPECRS Sbjct: 91 TEPSVPNQVQLINNFVNQGYNAIVVSAVSPDGLCSTLQRAMKRGVKVLTWDSDTKPECRS 150 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 +YINQGTP QLG MLVDMAA Q++K KAKVAFFYSSPTVTDQNQWVKEAKAKIAK+HP W Sbjct: 151 HYINQGTPEQLGSMLVDMAANQISKPKAKVAFFYSSPTVTDQNQWVKEAKAKIAKDHPEW 210 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGF 245 EIV TQFGYNDA KSLQTAE ILKAY DLDAIIAPDANALPAAAQAAENLK + V IVGF Sbjct: 211 EIVITQFGYNDAIKSLQTAESILKAYPDLDAIIAPDANALPAAAQAAENLKVNSVVIVGF 270 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 STPNVMRPYV+RG VK+FGLWDVVQQGKISV A+ALLK + GDKL+++G+G +EVS Sbjct: 271 STPNVMRPYVKRGKVKQFGLWDVVQQGKISVAAANALLKGEKLNVGDKLNVQGIGTIEVS 330 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 PN VQGY+YEADGNGI+LLPERV+F K+NI Y+F Sbjct: 331 PNKVQGYEYEADGNGIILLPERVVFTKDNIDNYNF 365 >UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFA1_9LACT Length = 373 Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 201/324 (62%), Gaps = 12/324 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 ++ FIPK+ G FF SG GAQ+ K+ G V Y+G SV+ QV +INN V G +I Sbjct: 50 KVVFIPKVTGNSFFESGNLGAQEMAKKEGFTVDYNGNPVASVANQVTIINNAVQTGAGSI 109 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA---- 144 VS+V P GL ALK+A + G++V+TWDSD P+ RS ++QGTP QLG MLV M+ Sbjct: 110 AVSSVDPTGLDNALKQAQKAGLKVVTWDSDVSPDARSLMVSQGTPTQLGEMLVKMSVDAL 169 Query: 145 ---ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV--TTQFGYNDATK 199 + KDK K A+ YSS TV DQN W K + I K +P WE V + + DA + Sbjct: 170 EKRGKDPKKDKIKYAWHYSSSTVQDQNSWQKVGEEYIKKNYPNWENVNESNYYSNQDAQQ 229 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK--VAIVGFSTPNVMRPYVER 257 +L + IL A+ D+D II D+ ALP QA +N K K + + GFSTPN ++ Y + Sbjct: 230 ALNVGQSILSAHKDIDLIICNDSTALPGQLQAVQNAKLTKKDITVTGFSTPNSIKKYAKD 289 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY-EA 316 ++E+GLWDV QG ++VY+A+ L K GDK+++ G+G+VEV NS+ +Y ++ Sbjct: 290 DIIEEWGLWDVKVQGALAVYLANYLASGNQAKVGDKINVPGIGEVEVQNNSILDPNYKDS 349 Query: 317 DGNGIVLLPERVIFNKENIGKYDF 340 +G+VLLPER IF KEN+ KYDF Sbjct: 350 PDSGVVLLPERTIFTKENMDKYDF 373 >UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepID=C5EKT6_9FIRM Length = 326 Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 183/324 (56%), Gaps = 13/324 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 +AFIPKL G FF S NGAQ+ KE G V Y G +V+ QV +INN + G +AI Sbjct: 3 VAFIPKLTGNAFFESANNGAQEYSKEWGFTVDYQGSANAAVADQVNVINNAIASGVDAIC 62 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA---- 145 VS+V GL AL A GV V+TWDSD R+ ++QGTP LG MLVDM A Sbjct: 63 VSSVDATGLDSALTEAKDAGVTVVTWDSDVSDTARTLMVSQGTPDLLGKMLVDMGADSLT 122 Query: 146 ---RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN--DATKS 200 + V D K + YS TV DQN W +A I + P WE V Y+ DA K+ Sbjct: 123 NRGKDVKADTIKYCWHYSQATVADQNSWQVAGEAYIKENFPNWENVAPDNYYSEQDAEKA 182 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN--LKNDKVAIVGFSTPNVMRPYVERG 258 + IL+A+SD+D II D+ ALP +AA+N L D V I GF++P ++ Y G Sbjct: 183 VSIGASILEAHSDIDLIICNDSTALPGQCKAAQNKGLTKDDVTITGFASPMSIKDYCAAG 242 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS--VQGYDYEA 316 ++++GLWD QG + Y+A L + GDK+DI +G+VEV PN V+G Sbjct: 243 VIEQWGLWDCGVQGAMGCYLAAYLAAGNEVHVGDKIDIPSIGEVEVMPNDCLVEGASTAE 302 Query: 317 DGNGIVLLPERVIFNKENIGKYDF 340 NG+VLLPER +FN +N+ Y+F Sbjct: 303 VNNGVVLLPERTVFNADNMNDYNF 326 >UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWS5_9CLOT Length = 370 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 192/326 (58%), Gaps = 14/326 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 +I F+PK+ G FF S +GAQ+ K++G ++ YDG +V+ QV +INN +NQG + Sbjct: 45 QIVFVPKVTGNSFFESANDGAQEFAKKVGGFEIKYDGSATAAVADQVTIINNAINQGADG 104 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I VS+V GL +K+AM G+ V+TWDSD + R ++QG+P LG L+ ++ Sbjct: 105 IAVSSVDATGLDEVMKKAMDAGLAVVTWDSDVSADARQIMVSQGSPEILGEFLLQLSENA 164 Query: 148 VN-------KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN--DAT 198 + KD K + YS TVTDQN W A+ I++++P WE V Y+ DA Sbjct: 165 LKASGLDPAKDAVKYCWHYSQATVTDQNSWHDAAEKMISEKYPNWENVAPDNYYSEQDAE 224 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL--KNDKVAIVGFSTPNVMRPYVE 256 K++ E +L A+ D++ +I D+ ALP AQAA+NL VAI GF+TPN M+ + Sbjct: 225 KAISVGESVLTAHEDINLVICCDSTALPGQAQAAQNLGKTTKDVAITGFATPNAMKDFCT 284 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS-VQGYDYE 315 G V +GLWD QG I+ Y+A L + GDK+DI +G+VE+ NS + G D + Sbjct: 285 AGVVNNWGLWDTGLQGSIANYMAYYLASGNKVTIGDKVDIPEIGEVEIVNNSEITGDDAD 344 Query: 316 -ADGNGIVLLPERVIFNKENIGKYDF 340 DG+G+V LPER FN +N+ YDF Sbjct: 345 NVDGSGVVFLPERAEFNADNMDDYDF 370 >UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTL4_ALIAD Length = 352 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 178/314 (56%), Gaps = 17/314 (5%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 ++AFIPK +G+ +FT GAQ +L + +TY+GPT+ S + QV +IN++V QGYN I Sbjct: 54 KVAFIPKEIGIPYFTGADQGAQSVAPKLHIQLTYNGPTQASAADQVSMINSYVAQGYNVI 113 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 VSA P L PAL+ AM+RGV+V+TWDSD P R ++++Q T +G LV + A Sbjct: 114 AVSANDPTSLAPALESAMRRGVKVITWDSDVIPSARQFFVDQATAQGIGTTLVQITAEHF 173 Query: 149 NKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 K +V S+PT +QN W+ K I ++ IVT Q+ L AE + Sbjct: 174 KSQKNVEVGILSSTPTNPNQNAWIAVMKQAIQSKYKNLHIVTIQYDQEQPDVGLTAAENM 233 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L+AY + AII+PD+ +PAAA+A E L KV + G + P M+ YV GTV+EF LW Sbjct: 234 LRAYPQMKAIISPDSVGVPAAAEAVEKLGLKGKVFVTGLADPIQMKQYVNDGTVQEFVLW 293 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 DV + G +++YVA A++ G+M + G + + VQ N +VLL Sbjct: 294 DVPKLGALTMYVARAVV-DGTMP------VNGTFKCALGSFKVQ--------NRVVLLGN 338 Query: 327 RVIFNKENIGKYDF 340 IFNK NI ++ Sbjct: 339 PTIFNKSNINNANY 352 >UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Bacteria RepID=C1XTQ0_9DEIN Length = 312 Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 181/314 (57%), Gaps = 18/314 (5%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 IA IPKLVG+ +F + GA++A ELG + + Y GPTE V Q++LI NF+ + I Sbjct: 14 IAMIPKLVGIDYFNATEQGAKEAAAELGNIRLIYQGPTEGRVDKQIELIENFITAKVDVI 73 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V+A P + P L++A + G++V+TWD+D R + NQ T A +G LVD ARQV Sbjct: 74 SVAANDPVAIAPVLEKARKAGIKVVTWDADA--NVRDVFCNQATFAGIGKALVDEMARQV 131 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 K+ +VA SS T +QN W+ E K +AK++PG ++V T+ D + + + +L Sbjct: 132 GKE-GEVAIVTSSLTAPNQNAWIAEMKKVLAKDYPGLKVVDTKPSEEDQQLAFRVTQDLL 190 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 KAY +L + A + A P AA+A + K KVA+VG STP M+P+++ G +K LW+ Sbjct: 191 KAYPNLKGVWALSSVAFPGAAEAVQQAGKAGKVAVVGLSTPKQMKPFMKAGVIKSVVLWN 250 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIK-GVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 + G +SVY A L++KG +K GDK+ K G V+ S+Q +LL Sbjct: 251 PIDLGYLSVYAAKQLVEKG-LKEGDKIVTKRGTFTVQKDDKSLQ-----------ILLGP 298 Query: 327 RVIFNKENIGKYDF 340 IF ENI K++F Sbjct: 299 PFIFTPENIDKFNF 312 >UniRef50_Q0S9A1 Possible sugar transporter, solute binding component n=24 Tax=Bacteria RepID=Q0S9A1_RHOSR Length = 358 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 174/333 (52%), Gaps = 21/333 (6%) Query: 14 ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQ 73 A G A +Q ++AF+PK + + G + A +E G + GP + S S Q Sbjct: 41 ATGTANPDAPIQDGLQVAFLPKQLNNPYSDIEVGGGKTAVEEFGGEYKLVGPNDASASSQ 100 Query: 74 VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP 133 V IN + QG N I ++A P+ +CP+L +A G++V+T+DSD +CR +INQ T Sbjct: 101 VSYINTLIQQGQNVINIAANDPNAVCPSLNQARDAGIKVVTFDSDAAEDCRDLFINQATT 160 Query: 134 AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIVTTQ 191 +G L M + Q+ K+A ++P T+QN W++ KA++A E+ E+V T Sbjct: 161 QGVGETLAKMTSEQIGG-TGKIAVLSATPNATNQNAWIEVLKAELASKPEYQNIELVATV 219 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ--AAENLKNDKVAIVGFSTPN 249 +G +D KS Q +G+L+ Y DL AI++P + AAA+ ++ + K + + + G TPN Sbjct: 220 YGNDDDQKSFQETQGLLQTYPDLKAIVSPTTVGIAAAARYISSSSYKGN-IVLTGLGTPN 278 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK--TGDKLDIKGVGQVEVSPN 307 MR YV+ GTVKEF LWD G +S Y A A L G + G K +G+ Sbjct: 279 QMREYVKNGTVKEFALWDPTNIGYLSAY-AGAALASGQITGAEGQKFTAGKLGE------ 331 Query: 308 SVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 Y G V+L +F+ +I +Y+F Sbjct: 332 ------YTIGAGGEVVLGPPTVFDANSIDQYNF 358 >UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C4W6_THENR Length = 337 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 113/346 (32%), Positives = 193/346 (55%), Gaps = 21/346 (6%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-----VDV 60 FK++ L+ L + +++ + +I +PK G +F + GA+ A EL VD Sbjct: 2 FKRVLFLTFLFFSILALAIDPV-KIFMVPKFTGAPYFVATEKGARVAVNELKSLGLVVDF 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT- 119 Y GP+ + Q+++I++ + Q +A+IVS + L LK+A Q G++V+T+D+D Sbjct: 61 FYTGPSVANTEEQIRIISSLIEQKPDALIVSPNDAEALSSILKKARQNGIKVVTYDADVA 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 PE R ++NQ T +G LV++ A V + A++A + P +QN W+ K I Sbjct: 121 DPEARDVFVNQATFMSVGETLVELVAEGVGPE-ARIAIISADPNARNQNAWIDAMKKYIQ 179 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKA-YSDLDAIIAPDANALPAAAQAA--ENLK 236 +++P +I+T ++GY+ +SLQ A+ I+ A Y ++DAI+AP + ALP AA+A LK Sbjct: 180 EKYPKMKILTIKYGYDRPAESLQAAQDIINAYYPNIDAIVAPTSVALPMAAEAVLKAGLK 239 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 K+ + G +TPN +R YV+ G +K+F LW G +++YVA+AL + + + + Sbjct: 240 G-KIFVTGLATPNDVRRYVKEGVIKKFALWSPKDLGYLALYVANALARNMVFEIDGERFV 298 Query: 297 KG--VGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 G +G ++ + E N IVL P +IF+ NI ++DF Sbjct: 299 AGGKLGLYKIQK------EVEGSKNVIVLGPP-LIFDINNIDQFDF 337 >UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=42 Tax=Proteobacteria RepID=A1WJR0_VEREI Length = 341 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 98/285 (34%), Positives = 168/285 (58%), Gaps = 5/285 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 ++IA + K +G GFF + GAQ+A KE+ +++ Y GP + + GQ+++IN ++Q Sbjct: 36 DKIAVVVKSLGNGFFDAVNQGAQEAAKEIKNIEIIYTGPAKSTAEGQIEIINALISQKVA 95 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 AI++SA PD L P+LKRAM RG++VL++DS + + R +++ + A +G LV + + Sbjct: 96 AIVISANDPDALAPSLKRAMGRGIKVLSFDSGVRKDGRMMHLSPSSNALIGEKLVQL-TQ 154 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAE 205 Q D ++A S+ T+QN W++E + +A+ + G ++V+ +G + KS + + Sbjct: 155 QAIGDSGEIAVVSSTAQATNQNIWIEEIRKVLARPAYKGLKLVSVAYGDDQIDKSYRETQ 214 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFG 264 G+ K+Y +L AIIAP + AAA+A ++ K V + G P+ M +V+ G VK F Sbjct: 215 GLFKSYPNLKAIIAPTTIGVAAAAKAVQDEKKVGSVYVTGLGLPSEMAGHVKNGAVKSFA 274 Query: 265 LWDVVQQGKISVYVADALLK-KGSMKTGDKLDIKGVGQVEVSPNS 308 +W+ + G S+ A L+ K + K GDK+ + VG V + NS Sbjct: 275 IWNPIDLGYSSIQAASQLIAGKFTGKPGDKVSLGRVGSVVLDANS 319 >UniRef50_A7BAM4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAM4_9ACTO Length = 352 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 115/322 (35%), Positives = 177/322 (54%), Gaps = 22/322 (6%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQG 84 +++ I FIPK + F G + A E+G +V GP E S S QV IN+ V G Sbjct: 46 SSQSITFIPKQLNNPFSDVMLGGGKNAAGEIGFAEVNVVGPLEASSSSQVSFINSEVQAG 105 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 N ++++A PD +CPAL+ A + G +V+T+DSD+ +CR +INQ Q+ ++DM Sbjct: 106 TNVLVIAANDPDAVCPALQDARKAGTKVVTFDSDSAADCRDLFINQVESKQVAITMLDMV 165 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIVTTQFGYNDATKSLQ 202 + Q+ KVA ++ +QN W+K + +IA ++ G EIV +G +D TKS Q Sbjct: 166 SDQIGG-SGKVAILSATANAANQNAWIKFMEDEIASNDKYKGIEIVAKVYGDDDDTKSFQ 224 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQ--AAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 A+G+L+A+ DL+AI++P + A A+ + + K KV + G PN MR +V+ GTV Sbjct: 225 EAQGLLQAHPDLNAIVSPTTVGIAATARYLSTSDYKG-KVFLTGLGLPNEMRSFVKDGTV 283 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMK--TGDKLDIKGVGQVEVSPNSVQGYDYEADG 318 KEF LWD Q G ++ Y A L G++K G+K +G+ + N Sbjct: 284 KEFALWDPAQLGYVAAYAG-AALDSGAIKGEVGEKFTAGNLGERTIGENKT--------- 333 Query: 319 NGIVLLPERVIFNKENIGKYDF 340 V++ + V FN +NI KYDF Sbjct: 334 ---VVVGDPVRFNADNIDKYDF 352 >UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria RepID=Q01NP6_SOLUE Length = 682 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 168/315 (53%), Gaps = 24/315 (7%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 IA +PK G +F S GA++A +ELGVD+ +DGPT + Q +++ ++ +G +AI Sbjct: 388 IAVMPKAKGDPYFISCKAGAEEAARELGVDLIWDGPTGLDAAKQNEVVEGWITRGVDAIA 447 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 VS + G+ L++A +RG++VLTWD+D P+ R Y+INQ TP +G L D AR + Sbjct: 448 VSVENGPGISTVLRKARERGIKVLTWDADAAPDARDYFINQATPEGIGNTLTDEGARLIG 507 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 K + A + +QN W+ K ++A+++P ++VT + +D K+ + I+K Sbjct: 508 -GKGEFAIVTGALGAANQNAWIDFIKKRVAEKYPQLKLVTIRPSDDDRDKAFSETQTIMK 566 Query: 210 AYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 Y ++ IIA A A+P AA+A + V ++G S PN+ + YV G + LW+ Sbjct: 567 VYPNVKLIIAISAPAVPGAAEAVQQSGRKDVDVIGLSLPNLCKRYVHDGVAQAVVLWNTK 626 Query: 270 QQGKISVYVADAL----LKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLP 325 G ++VY A L L GS + G +G +E+ V+L Sbjct: 627 DLGYLTVYTAAKLVQGPLGSGSFQGGR------LGTIEIRGTE-------------VILG 667 Query: 326 ERVIFNKENIGKYDF 340 + IFNK NI +YDF Sbjct: 668 KPFIFNKANIDQYDF 682 >UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=2 Tax=Dictyoglomus RepID=B8E1T5_DICTD Length = 334 Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 170/311 (54%), Gaps = 16/311 (5%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I + K G FF + GAQ+A KELG+ V + P SV GQ+ +IN+ + Q +AI Sbjct: 28 IGLVTKTAGNPFFEAVNKGAQEAAKELGITVIHQAPAASSVQGQIDIINSMIAQKVSAIC 87 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 +SA PD L P ++A RG+ V+T+DS KP+ R ++NQ Q+G + V + A+ +N Sbjct: 88 ISANDPDALVPVCRKAQLRGIPVVTFDSAVKPQGRKLFVNQADMEQIGRIQVQLLAKMIN 147 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + ++A ++ T+ +QN W+ K ++ K E+ ++V +G + KS A G+ Sbjct: 148 YE-GEIAILSAASTMANQNTWIAWMKEELKKPEYSKMKLVAIVYGDDIREKSYNEAMGLF 206 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 K+Y +L IIAP + AAA+A E+ + KV + G P+ M YV+RGT K F LW+ Sbjct: 207 KSYPNLKGIIAPTTVGIAAAARAIEDAGLSGKVQLTGLGLPSEMAEYVKRGTCKAFALWN 266 Query: 268 VVQQGKISVYVADALLK---KGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLL 324 + G ++Y LL KG++ G+K+++ +G+ + E +G +++L Sbjct: 267 PIDLGYATIYATYRLLNREIKGNV--GEKVNLGRLGERTIVD--------EGNGGRMIIL 316 Query: 325 PERVIFNKENI 335 +F+ NI Sbjct: 317 GPPFVFDAANI 327 >UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1T0_9CLOT Length = 368 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/314 (29%), Positives = 174/314 (55%), Gaps = 15/314 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +IAFIP+L+G+ +F++ +G ++A ++LGV+ Y G T+ S + QV+++++ + QG NAI Sbjct: 68 KIAFIPQLIGIPYFSAMESGGKKAAEDLGVEFLYTGSTQASAAEQVKIMDSLIKQGVNAI 127 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +S + P +K+A + G++V T DSD R +Y+ Q LG L+D Q+ Sbjct: 128 SLSVLDSSSTNPYIKKAQEAGIKVYTSDSDAPDSTRDFYVAQALDKDLGTTLMDCLGEQM 187 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT-KSLQTAEGI 207 KV T T+ N W+ K + +++P EIV ++ ++ ++L+ A+ + Sbjct: 188 G-GSGKVGIVSGESTATNLNTWIDYIKQRQEEKYPDIEIVDIRYTQGGSSEQALKQAQEL 246 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 + Y DL ++A ++ +P AQA + K +VA++G+ +P ++P++E G +K+ LW Sbjct: 247 MTRYPDLKGLVAVASSTIPGVAQAVQQEGKAGEVAVIGYGSPATVKPFIESGVMKQSVLW 306 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 + G ++V+ G M K + + Q+E + V +D E N I+LL + Sbjct: 307 NAYDLGYLTVWA-------GKMAAEGK-EFEATNQIECIADPVT-WDAE---NKILLLGQ 354 Query: 327 RVIFNKENIGKYDF 340 +I +K+N+ +DF Sbjct: 355 PLIIDKDNVNDFDF 368 >UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protein n=3 Tax=Acetobacteraceae RepID=A9HG18_GLUDA Length = 368 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/335 (31%), Positives = 169/335 (50%), Gaps = 18/335 (5%) Query: 9 IALLSALGIAAISMNVQAAE--RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 IA L A G++ ++ AE +I F+PK++G+ +F++ G + G+ + Y GPT Sbjct: 49 IAALVAAGLSCMAPAQGRAETFQIGFVPKVIGIPYFSAMQQGFLKGGRAFDARIVYQGPT 108 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 SV+ Q Q++ + +N+ +A+ V+A SP L A +RGV + DS + Sbjct: 109 TSSVAAQAQIVQSLINRKLDAVAVAANSPTALEAQAVHARERGVIFASTDSQVDGDAVDL 168 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 + Q T L LVD A Q+ D ++AF PT T+ N W+ K+ +A + P ++ Sbjct: 169 RVMQATDEALAHTLVDQLATQI-PDGGQIAFVSGGPTATNLNMWISLMKSYLAAKFPKFQ 227 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGF 245 +V+ Q+ D +K+ + IL AY L II + A P AAQA + K+AI G Sbjct: 228 LVSVQYAGEDISKATEITSQILSAYPGLKGIIGVNTTATPGAAQAVLQAGLAGKIAITGI 287 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 PN +RPYV GTVK LW+ V G ++V+ LL+ ++ + + G+G + Sbjct: 288 DDPNTIRPYVLNGTVKSAVLWNPVDLGYLTVWGLTQLLQHKPLQVQNP--VPGLGTITYD 345 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 P + +LL + ++F KENI DF Sbjct: 346 PKT-----------KTLLLGQPMVFTKENI-SLDF 368 >UniRef50_C7Q7X0 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=10 Tax=Actinomycetales RepID=C7Q7X0_CATAD Length = 373 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 168/336 (50%), Gaps = 31/336 (9%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS-VSGQV 74 G A S V+ +AF+PK V +F G A LG G T + +GQV Sbjct: 58 GSANPSAAVKKGLTVAFLPKQVNNPYFNISDAGGNTALTALGESYKEVGTTSATDTAGQV 117 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 +N Q +AI VSA P LC ALK+AM G++V+T+DSDT P CR +++Q + Sbjct: 118 SYVNTLTQQHVSAIAVSAQDPGALCTALKQAMSAGIKVVTYDSDTDPGCRQAFVSQASSE 177 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFG 193 LG VD+ +++N ++A ++ T T+QN W+ + ++ K + ++V +G Sbjct: 178 ALGRSEVDLLGKELNY-TGQIAILSAAQTATNQNAWIGYMQDELKKPQFANMKLVKIAYG 236 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMR 252 +DA S Q +G+L+ Y DL II+P + AAAQ + + KV + G TPN MR Sbjct: 237 NDDAQMSFQQTQGLLQQYPDLKGIISPTTVGIKAAAQYLDGSQYKGKVLLTGLGTPNDMR 296 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 YV+ GTVK F LWD GK+ A A + S GQ+ + QG Sbjct: 297 SYVQDGTVKAFELWD---PGKLGQLAAYAAVALAS------------GQI----SGAQGQ 337 Query: 313 DYEAD--GN------GIVLLPERVIFNKENIGKYDF 340 + A GN G++ L +F+ NIG+++F Sbjct: 338 SFTAGPMGNFTLGAQGVITLGAPTVFDASNIGQFNF 373 >UniRef50_Q0FYN9 Probable sugar ABC transporter, substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYN9_9RHIZ Length = 367 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 165/315 (52%), Gaps = 24/315 (7%) Query: 33 IPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVS 91 IPKLVGVG+F S +G QQA +ELG + + DGPT ++ Q+ ++N++ G + I+ + Sbjct: 70 IPKLVGVGYFASTASGMQQAVEELGNITINTDGPTRANIDEQITFVDNYITSGVDGILFA 129 Query: 92 AVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD 151 A P + P LKRA+ G+ V+ +D+D + + R +++NQ P + ++D A ++ + Sbjct: 130 ANDPVAIAPVLKRALDAGINVVGYDADAEADARQWFVNQALPNGVAKSMMDQLASEIG-E 188 Query: 152 KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 + A S+ T +Q +W+ E +A K +P + T D S A+ ++ Y Sbjct: 189 EGSFAIVTSTFTTPNQARWISEMQAYTEKCYPNLTFLETVEAQEDNILSFNQAQTLINKY 248 Query: 212 SD-LDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 D L+ I+ + A PAA++A +N KV++VG + PN M+PY+ +K LW+ V Sbjct: 249 GDELNGILGMTSVATPAASEAVQQNGLCGKVSVVGLALPNAMKPYINGDCIKSTILWNTV 308 Query: 270 QQG----KISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLP 325 G ++ VAD L+ G+ ++ +G+++V S VLL Sbjct: 309 DLGYAAAQVMRQVADGTLEPGAT----TVNAGRLGELQVVNQSQ------------VLLG 352 Query: 326 ERVIFNKENIGKYDF 340 +F KE+I +DF Sbjct: 353 APKVFTKEDINDFDF 367 >UniRef50_C1YUW3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUW3_NOCDA Length = 355 Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 16/314 (5%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +I F+PK + FF G +A +E+G T G TE + QV+ +N G + I Sbjct: 56 KIDFLPKQLNNPFFEIVNQGGAEAVEEVGGTATERGGTEATADSQVEYVNAASQAGSDVI 115 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +++A PD +CPAL A G ++ +DSD C ++NQ + +G LV+M A + Sbjct: 116 VIAANDPDAVCPALNEARDNGAAIVGYDSDAN--CTDVFVNQSSTELIGRTLVEMIAEDL 173 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + A ++P T+QN W+ + +A +E+ E+V T +G +D +S Q +G+ Sbjct: 174 GG-EGTFAVLSATPNATNQNAWIAAMEEVLAEEEYADLELVETVYGNDDDLESFQEMQGL 232 Query: 208 LKAYSDLDAIIAPDANALPAAAQ-AAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 ++++ DLD +++P + AAA+ +++ +VA+ G TPN MR +V GTV F LW Sbjct: 233 MQSHPDLDGVVSPTTVGIAAAARYVSDSEYRGEVAVTGLGTPNQMREFVHDGTVGRFALW 292 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 + + G ++ Y A L+ G I G + + + +E +G IVL P Sbjct: 293 NPLDLGYLAGYTG-AALRAGQ--------ITGAEGETFTAGRLGEFTFETEGE-IVLGPP 342 Query: 327 RVIFNKENIGKYDF 340 +V F+ N+ +DF Sbjct: 343 QV-FDAGNVDDFDF 355 >UniRef50_C8SFB0 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SFB0_9RHIZ Length = 328 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 161/318 (50%), Gaps = 22/318 (6%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 ++AF+P+L+G+ +F + G +A K+LGVD Y GP + + Q+Q++ N ++QG A Sbjct: 28 HKVAFVPQLIGIPYFNAMEAGGNRAAKDLGVDFIYSGPVDTNPVDQLQIVQNLIDQGVEA 87 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I VS + + P ++ A +G+++ T DSD R+ Y+ Q T LG +VD ++ Sbjct: 88 ISVSVLDASSIAPVVESAKAKGIKLFTSDSDAPDSGRAVYVAQATDEGLGTTIVDELVKR 147 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 V +D A + T ++ N W+ + + A ++P +++ QF A ++ Q + + Sbjct: 148 VGED-ATIGIVSGEATASNLNAWIGFMQKEAAAKYPKLKLLAPQFAGGTAERAAQISGDL 206 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 + A D+ AIIA ++ P AQA E K V G+ +PN R Y++ G LW Sbjct: 207 MAANPDIKAIIAVASSTCPGVAQAIETAGKIGSVIGAGYCSPNTARAYLKSGAFGFTVLW 266 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD----YEADGNGIV 322 D Q G ++V+ L+ G+ + N + G + Y+A GI+ Sbjct: 267 DPEQLGYLTVWAGKQLID---------------GKAFEAENKIAGLEKPVTYDA-AKGIL 310 Query: 323 LLPERVIFNKENIGKYDF 340 LL +F K+N+ K++F Sbjct: 311 LLGPPAVFTKDNVDKFNF 328 >UniRef50_C6BA29 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6BA29_RHILS Length = 334 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/348 (28%), Positives = 173/348 (49%), Gaps = 22/348 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER----IAFIPKLVGVGFFTSGGNGAQQAGKEL 56 MT H FK + + +L + + N Q + + F+PKL +F GA++A KE+ Sbjct: 1 MTSHLFKTLLVAGSLIASIAAANAQECAKEPVTVGFLPKLDTDPYFQVAQTGAEEAAKEI 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 G P++ + Q+ INN V+Q I +SA + + PAL+RA ++GV+V+++D Sbjct: 61 GGKAIKQAPSQATAEAQIDFINNLVSQKVGVIAISANDANAVAPALRRAAKQGVKVVSYD 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SD RS ++NQ L M+++ + +N D + A S+PT T+QN W+ K Sbjct: 121 SDVSTAARSVFLNQAAGDSLAEMMLESMGQMINYD-GEFAILSSTPTATNQNAWIDFMKK 179 Query: 177 KIA--KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 +A K++ ++V +G + Q A + +A+ +L II P LPAAA+A + Sbjct: 180 TMAGDKKYSKMKLVQVAYGQESEQVNQQQALALAQAFPNLKGIIIPAGIGLPAAARAMDQ 239 Query: 235 LK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK-KGSMKTGD 292 KV + G + +++ Y++ G+V++ W+V G ++ Y A A+ + K + K G+ Sbjct: 240 AGLLGKVKLTGLAPATLIKKYIQNGSVQDI-WWNVKDLGYLTYYAAQAVAQCKLTGKEGE 298 Query: 293 KLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 + +G Y+ NG VLL I N+ ++ F Sbjct: 299 TFEAGRLG------------SYKVGANGEVLLGPADIVTPANVEEFKF 334 >UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2I7_9CLOT Length = 348 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/314 (28%), Positives = 148/314 (47%), Gaps = 14/314 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I PK + + G GAQ+A ELG + ++GP ++ Q +I+ + + Y AI Sbjct: 46 IGMCPKFTSDPYMVAAGEGAQEACDELGYTLDFNGPVNADIAAQSDIIDQWTQKKYTAIT 105 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 +SA D L PA+K A G+ WD+D + R ++NQ T +G +VDM + Sbjct: 106 ISANDADALSPAMKAAQDAGIYTSAWDADVNADSRELFLNQVTFEGMGKTMVDMMVEEAG 165 Query: 150 K--DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 D V ++P +QN W++E K + +P +IV G D KS Sbjct: 166 SSGDFLVVTAVLTAP---NQNAWIEEMKKYMEANYPDMKIVDILAGDEDLAKSRDVTLNY 222 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L+++ + + A A P +A E L KVA+ G P++++ Y+++GT+ + LW Sbjct: 223 LRSHPETKGVFAVTGMASPGVCEAIEQLDLVGKVAVTGLGVPSLIKDYLKKGTINQCCLW 282 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 G ++Y+A + KLD + Q + + ++ GIVLL + Sbjct: 283 SPYDIGYGAMYLA-------KTQIDGKLD-EAKEQGYIEAGRLGKLEFIDKDKGIVLLGD 334 Query: 327 RVIFNKENIGKYDF 340 +IF K+N+ YDF Sbjct: 335 PLIFTKDNVDDYDF 348 >UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZU3_SYNWW Length = 352 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 19/316 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNA 87 +IAF+ GV +F G GA+QAG+ LG +V Y GP + + ++Q+IN+ V QG A Sbjct: 52 KIAFVTFATGVPYFEIGAAGAKQAGQALGYEVVYKGPAKADSAAEIQIINDLVTQGEVKA 111 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+V+ + + PALK+A + ++V+TWD D +PE R Y +G ++ R Sbjct: 112 IVVACMDSKSIIPALKKAREADIKVVTWDLDCEPEGRDCYAGLMDLVVMGNEWIESMVRS 171 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 V D+ + A ++ T N+ + K A+++P ++V + D K+ Q ++ + Sbjct: 172 VG-DEGEYAIVMATLTNEFMNKRIDNMKKYAAEKYPKLKLVAVESCDADPQKAYQISKDL 230 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L Y +L I A +AA+A E+ K +V +VG TPN+ +P + G KE LW Sbjct: 231 LTKYPNLKCIATSSTEAFSSAAKAIEDDGKIGQVYVVGGLTPNLAKPAFKSGAAKEAVLW 290 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS--PNSVQGYDYEADGNGIVLL 324 D + V +A L++ KT DK VG+VE++ P + E GI+ Sbjct: 291 DPGKWAGFGVTIATQLIEG---KTFDK-----VGKVEITGFPKA------ELFAPGILYY 336 Query: 325 PERVIFNKENIGKYDF 340 E + F EN+ +YDF Sbjct: 337 HELLTFTPENVDRYDF 352 >UniRef50_A9H7R1 Putative exported protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9H7R1_GLUDA Length = 335 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 19/312 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 R+ PK G +F + +GA++A KELG + Y GP S QV+ + NF+ Q N + Sbjct: 33 RLMMTPKWTGFPYFEAAAHGARRAAKELGDTLVYAGPDRADASLQVETLENFLTQRPNGV 92 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 I+SAV + + P LKRA +RGV V T+DSD R ++NQ + Q ++D A Sbjct: 93 ILSAVDLNAVAPVLKRARKRGVVVTTFDSDAALPARDMFVNQLSYEQAARTMLDAALIDA 152 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT---QFGYNDATKSLQTAE 205 + ++AF +SPT + ++ ++ + P +++ T Q+ +D KS A Sbjct: 153 PQ-GGEIAFISASPTAPNHVAHMR-IMTQLTQTDPKYKVFTVVDRQYAQDDDAKSYDVAI 210 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFG 264 +++A+ +L II+ A + PAAA+A + + KV GF+ P+ ++ Y++ G+ K F Sbjct: 211 NLMQAHPNLKVIISSSAVSAPAAARAIDASGHAGKVFATGFALPSAIKNYLQDGSEKAFA 270 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIK-GVGQVEVSPNSVQGYDYEADGNGIVL 323 LW+ + G ++ YV ++ KLD+K G V + + Y+ +G + Sbjct: 271 LWNPEELGYLATYVT-------HLRLAGKLDLKPGTSFVAGTAGT-----YKVGEDGEID 318 Query: 324 LPERVIFNKENI 335 + +IF K+NI Sbjct: 319 YGKPLIFTKDNI 330 >UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FB6 Length = 337 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 14/313 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +IAF+PK+ G+ +F + G A + LG + P + Q ++ + + + I Sbjct: 38 KIAFVPKIGGIPYFDAMNAGGMLASRRLGAKWSLHAPASLDPAAQTAILRQLIAERVDVI 97 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V+ P L P + A ++G+ VLT D+D R ++NQ T +G LVD ++ Sbjct: 98 AVAPNDPAELAPTIAEAREKGIHVLTTDTDAADSQREVFVNQTTADGIGSALVDSLMKKT 157 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + + A + N W++ K A+ +P ++V T + D T + + A+ IL Sbjct: 158 D-GAGEYAIVSCGRAAANLNSWIEAEKTYAAQRYPQAKLVETVYAGEDTTTATKLAKEIL 216 Query: 209 KAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 + L +I A P A+A + K +V VG TP M+PY+ G+ LW+ Sbjct: 217 NRHPKLTGMIGQCTTATPGIARAVRDQQKIGQVFTVGTGTPQTMKPYLVDGSCSMTVLWN 276 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPER 327 V G ++ + A+ L TG L K VSP + Y+A VLL + Sbjct: 277 VESLGYLTAWTAEQL------ATGTPLRPKN----NVSPE-LPAVHYDA-ATRTVLLGDP 324 Query: 328 VIFNKENIGKYDF 340 ++ + N+ ++ + Sbjct: 325 LLITQNNVDQFKY 337 >UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C300_9CLOT Length = 347 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 22/317 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNA 87 ++ +PK++G+ F S N A++ ELG+ + Y GP+E S QV L+ + ++ G +A Sbjct: 48 KVVMMPKVMGMPIFESYYNSAKEQADELGITLDYIGPSELDASKQVNLVQDLISGGDTDA 107 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE-CRSYYINQGTPAQLGGMLVDMAAR 146 +++ + L P LK AM G+ V TWD D E R Y+IN + G + Sbjct: 108 LLICPADGEALVPVLKEAMDAGIHVYTWDDDVVDESAREYFINMCSDKIYGEQMGKTVGE 167 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 + K K K+ + T T + + + E+P +++ T + D K+ + Sbjct: 168 ML-KGKGKIGVVNGNMTATSLTLKEEALQDVLKNEYPDIKVMPTVYHGGDQQKAYALCQD 226 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFG-L 265 +L A DLD I L AAQA + ++V + G PN ++ Y+++ ++ G L Sbjct: 227 LLTANPDLDLIAVIATPGLLGAAQAVDASGRNEVIVYGAEQPNNIKEYMKKDGLEVVGCL 286 Query: 266 WDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLL 324 WDV+ GK +V + + L G K GD +V+GY E+ G + Sbjct: 287 WDVMTLGKEAVNIVYSCLADGKEYKEGD---------------TVEGYP-ESSVEGTNIT 330 Query: 325 PERVI-FNKENIGKYDF 340 V+ F+K+ + Y+F Sbjct: 331 FNAVLEFDKDTVDDYNF 347 >UniRef50_B8G8A7 ABC-type sugar transport system periplasmic component-like protein n=3 Tax=Chloroflexus RepID=B8G8A7_CHLAD Length = 708 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 160/329 (48%), Gaps = 23/329 (6%) Query: 22 MNVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKELGV--DVTYDGPT-EPSVSGQVQL 76 + ++A +R + +PK +G+ F GA++A ELG ++ + GPT E SV+GQ++ Sbjct: 390 ITLRAGQRADMILLPKFLGIAVFDQAYEGAKEAHAELGNKGNLIFTGPTAENSVAGQIET 449 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT-KPECRSYYINQGTPAQ 135 + N QG A+++S + D + A + A GV+V+TWDS + S ++ Q + Sbjct: 450 LTNAATQGVKAVMLSNNAGDQIAAAAQAAQAAGVKVVTWDSPIPSAQGESVFVAQVDFNE 509 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGY 194 G ++ DMA + + A +SP +QN W+ K + + ++ ++V T +G Sbjct: 510 TGRVMADMALSILGPQGGEFAILSASPDAANQNAWIAAMKQVLTEPKYANLKLVDTVYGN 569 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA--ENLKNDKVAIVGFSTPNVMR 252 + + +S A ++ Y +L I+AP + AAA+A E L DKV + G P+ M Sbjct: 570 DQSEESYNQALALVDKYPNLKLIMAPTTVGIAAAAKAMTDEGL-CDKVKVSGLGLPSEMA 628 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 Y G +F LW G ++ Y+A L TG ++GV + + Y Sbjct: 629 SYTLSGCAPQFALWSFKDLGYLTYYLAYGL------ATG---QLQGVEGERFNAGRMGTY 679 Query: 313 DYEAD---GNGI-VLLPERVIFNKENIGK 337 E D NG+ VL+ ++ EN+ K Sbjct: 680 TIEKDPTRPNGLRVLMGPFTVYTAENVNK 708 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 21/315 (6%) Query: 32 FIPKLVGVGFFTSGGNGAQQAGKELGV--DVTYDGPT-EPSVSGQVQLINNFVNQGYNAI 88 +PK +G+ F GA++A ELG ++ + GPT E SV+GQ++ + N QG A+ Sbjct: 71 LLPKFLGIAVFDQAYEGAKEAHAELGNKGNLIFTGPTAENSVAGQIETLTNAATQGVKAV 130 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDT-KPECRSYYINQGTPAQLGGMLVDMAARQ 147 ++S + D + A + A GV+V+TWDS + S ++ Q + G ++ DMA Sbjct: 131 MLSNNAGDQIAAAAQAAQAAGVKVVTWDSPIPSAQGESVFVAQVDFNETGRVMADMALSI 190 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAEG 206 + + A +SP +QN W+ K + + ++ ++V T +G + + +S A Sbjct: 191 LGPQGGEFAILSASPDAANQNAWIAAMKQVLTEPKYANLKLVDTVYGNDQSEESYNQALA 250 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAA--ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 ++ Y +L I+AP + AAA+A E L DKV + G P+ M Y G +F Sbjct: 251 LVDKYPNLKLIMAPTTVGIAAAAKAMTDEGL-CDKVKVSGLGLPSEMVSYTLSGCAPQFA 309 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD---GNGI 321 LW G ++ Y+A L TG ++GV + + Y E D NG+ Sbjct: 310 LWSFKDLGYLTYYLAYGL------ATG---QLQGVEGERFNAGRMGTYTIEKDPTRPNGL 360 Query: 322 -VLLPERVIFNKENI 335 VL+ ++ ENI Sbjct: 361 RVLMGPFTVYTAENI 375 >UniRef50_A9BS22 Putative ABC transporter periplasmic sugar-binding protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BS22_DELAS Length = 329 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 8/317 (2%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 H F + + A AE ++ + K+ G+ +F + G +AG+ELG+ Sbjct: 2 FHGFSRFSRALLACTLAALAGAAGAEDVSVVAKVGGIPWFNAMETGIGKAGRELGISSGM 61 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GPTE + QV+ + + + + I V L P +RA G++VLT +S + + Sbjct: 62 VGPTEADAAQQVRAVEDLIARRSKVIAVVPNDARALEPVFRRARSAGIKVLTHESPDQ-K 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + I + A G +D A+ + + K F S TV N W A A K+ Sbjct: 121 GADWNIELSSVAGFGERHMDSLAKAMGGE-GKYVVFVGSLTVPLHNAWADAAIAHQKKQW 179 Query: 183 PGWEIVTTQFGYNDAT-KSLQTAEGILKAYSDLDAIIAPDANALPAAAQA-AENLKNDKV 240 P ++V+ +FG ++ S ++A+ +++A+ DL +A + A +A A+ K D++ Sbjct: 180 PKMQLVSERFGVAESLDDSYRSAQDLMRAHPDLKGFLAFGSQGPIGAGRAVADARKADRI 239 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 A+VG +P V G ++E +W+ G++ V+V L+ + D ++I G+G Sbjct: 240 AVVGSFSPGQGAKLVRDGVIREGFIWNPALAGEVIVHVGKMLID--GREPTDGMEIPGLG 297 Query: 301 QVEV--SPNSVQGYDYE 315 +V+V ++QG E Sbjct: 298 KVQVDRERRNIQGQKLE 314 >UniRef50_C0E8U4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8U4_9CLOT Length = 351 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 17/302 (5%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 + S +G Q A ELGV+ +GP PS + QV++IN+ + + + I ++A + L P Sbjct: 53 YMQSMISGFQAACDELGVNAISNGPDTPSAAEQVEIINDLIEKEVSVIAIAANDAEALSP 112 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 +L+ A+ RG++V++ DS R +I Q P ++G +L+ AA ++ + K+A S Sbjct: 113 SLQIAIDRGIKVVSLDSAVAASGRQLHIQQARPKKVGRVLI-QAAAEIIEGSGKLAVLSS 171 Query: 161 SPTVTDQNQWVKEAKAKIAK---EHPGWEIVTTQFGYNDATKSLQTAEGILKAY-SDLDA 216 + +QN W+K KA+ + ++ G E +G +D+ S +L+ Y +L Sbjct: 172 TENAPNQNDWIKWMKAEYDENPDKYAGIEWTEIVYGNDDSELSQAKTRELLEKYGEELKI 231 Query: 217 IIAPDANALPAAAQA-AENLKNDKVAIVGFSTPNVMRPYV--ERGTVKEFGLWDVVQQGK 273 IIAP + AAA+ E N K + G P+ M Y + G LW+V+ G Sbjct: 232 IIAPTVVGMEAAAKVITETGSNTK--LTGLGLPSQMSKYFTSDDGICPWMYLWNVIDAGY 289 Query: 274 ISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKE 333 ++ Y A L+ G +K GD D+ G++ + D DG VLL + + +K+ Sbjct: 290 LAAYAA-HALESGEIK-GDPTDVFMAGRL-----GAKVVDDAEDGGYEVLLGDPIKVDKK 342 Query: 334 NI 335 NI Sbjct: 343 NI 344 >UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PC03_9FIRM Length = 385 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 19/299 (6%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G ++ + +G + Y G EP+ ++++I + QG + + V A D L P L +AM Sbjct: 94 GFREFCESIGANCMYRGSDEPTAEKEIEIITQLMAQGVDGLAVIAADFDALEPVLTQAMG 153 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAK--VAFFYSSPTVT 165 +G+ V+T+DS P+ R ++ Q + +G + A + A+ V + P Sbjct: 154 QGIAVVTFDSAANPDSRQLHVEQASIDLVGRDQMKSALEIIGGPGAEGTVGILSAQPESQ 213 Query: 166 DQNQWVKEAKAKIAKEHP----GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 W A K +++P ++ +G + KS A+ +L+ Y D+D II+P Sbjct: 214 LHADWCN-AMLKEVEDNPEDFANVTVLPIAYGDDLPDKSTTEAQAMLQNYPDIDVIISPT 272 Query: 222 ANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 + +AA+ +++ + + + G P+ M PY+E G + LW+ QG Y+A A Sbjct: 273 TVGILSAAKVIQDMGS-ECKVTGVGLPSEMAPYIESGICYDCYLWNPYDQG----YLAAA 327 Query: 282 LLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEA--DGNGIVLLPERVIFNKENIGKY 338 + S+ TG+ VG V+ + Y E DG VLL + + F KENIG+Y Sbjct: 328 SVN--SISTGES--TGAVGDT-VTAGRLGEYTVEEYYDGGTQVLLGDPIRFTKENIGEY 381 >UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TWQ1_YERKR Length = 329 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 158/348 (45%), Gaps = 27/348 (7%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELG 57 M +H +A+L + ++ AA+ + IPKL +F G ++A K+ G Sbjct: 1 MKIHNKLTLAVLLSFSALCTTVPAYAADETYSMVGIPKLRS-AWFNDYETGLKKAEKDFG 59 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 + + P QV +I + ++QG NA++V + + P K+A + + V+T +S Sbjct: 60 IKTYFQAPASADEQQQVSVIRDSISQGNNALLVVPNNASSVEPVFKQARAQNIVVITHES 119 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + E Y + + G ++D A+ +K + A + S TV N W A + Sbjct: 120 VNQKEA-DYDVEMIENQKFGSYMMDQFAKHAG-EKGEFAIYVGSLTVPAHNIWADAAIKR 177 Query: 178 IAKEHPGWEIVTTQFGYN-DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA-AENL 235 + +++P ++V +F + D S Q ++ Y DL +++ + P A QA E Sbjct: 178 MKEKYPQMKLVAERFPVSEDRNASRQKTLELISTYPDLKGVLSFGSQGAPGAGQALREKG 237 Query: 236 KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL--KKGSMKTGDK 293 K+ ++G ++P ++E G + E LW + Y+A +L K+ +K G Sbjct: 238 LVGKLTVIGTTSPKESARFLEDGAITESILWSPGEASYAMAYIAKMVLDGKRDQIKQG-- 295 Query: 294 LDIKGVGQVEVSPNSVQGYDYEADGNGI-VLLPERVIFNKENIGKYDF 340 L++ G+G+ E+ NG+ ++ + + KEN KYDF Sbjct: 296 LEVPGLGKPEI--------------NGMNIIFDKPLTVTKENYKKYDF 329 >UniRef50_B7R620 Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=3 Tax=Bacteria RepID=B7R620_9THEO Length = 344 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 147/310 (47%), Gaps = 17/310 (5%) Query: 33 IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSA 92 + K +F G Q+ K+ GV GP++ + Q+Q++ + + Q +A++V Sbjct: 50 VVKSTAFNWFKRMETGIQEFSKDTGVKAVMQGPSKADAALQLQVVEDAIAQKPDALLVVP 109 Query: 93 VSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK 152 P+ L PALK+A+++G+ V+T ++ + + +Y + A G L+D A+++N + Sbjct: 110 FKPETLEPALKKALEQGIVVITHEA-SNAQNVTYDVEAFDNAAYGRHLMDELAKRMNYE- 167 Query: 153 AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN-DATKSLQTAEGILKAY 211 K F S T T N+WV A A +++P + + T++ N D K+ Q + +LK + Sbjct: 168 GKYVVFVGSLTSTTHNEWVDAAIAWQKEKYPKMQFIGTKYETNDDVQKAYQIMKDLLKTH 227 Query: 212 SDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQ 270 D+ + A + A QA E K+A+VG S P+ ++ G + WD + Sbjct: 228 PDIKGVQGSSAVDVVGAGQAIEEAGLAGKIAVVGTSIPSYAGDLLKSGAISLISCWDPAK 287 Query: 271 QGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIF 330 G VA +L+ ++ G L + G ++++ + G + + Sbjct: 288 AGYAMNKVALMVLQGQKIEDGMDLGVPGYEKIKLVGKVIYGSAW-------------IDI 334 Query: 331 NKENIGKYDF 340 +K+N+ +Y F Sbjct: 335 DKDNMDQYPF 344 >UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G253_ABIDE Length = 376 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 31/305 (10%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G + GK V+V GP + QVQL+ + VNQG +A+ V + P L L++AM+ Sbjct: 91 GVDEFGKAKTVNVIQKGPANADAASQVQLVEDMVNQGVDALCVIPIDPGALESVLQKAME 150 Query: 108 RGVRVLTWD-SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTD 166 +G+ V++ + SD K Y + T G ++ A+ + + + A + T T Sbjct: 151 KGIVVVSHEASDLKNTL--YDVEAFTAEDFGNTMMQELAKAMG-ESGQYAQMVAYTTSTT 207 Query: 167 QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA--PDANA 224 ++ K A + + ++ ND S ++AE + AY ++ P+ Sbjct: 208 HMEYSKAEYAYQKENYKNMSLI------NDTVPSAESAEKVNTAYEKAKELLKANPELKG 261 Query: 225 LPAA--------AQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKIS 275 A AQA E L DKV+IVG TPN R Y+ GT+ LWD G Sbjct: 262 FTGAASVDILGEAQATEELGLTDKVSIVGVGTPNATRDYINSGTISAVCLWDPAAAGYAM 321 Query: 276 VYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENI 335 +A +L +K G L KG V + S N +L +I K+NI Sbjct: 322 CNLAYMILAGEEIKEGINLGQKGYESVTIQKGS----------NRCILGNAPLILTKDNI 371 Query: 336 GKYDF 340 YDF Sbjct: 372 NDYDF 376 >UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria RepID=A4TH97_YERPP Length = 329 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 17/312 (5%) Query: 9 IALLSALGIAAISM---NVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 +ALL+ ++A + AAE+ IA + K+ G+ +FT G +A K+L V+ Sbjct: 5 LALLNVCIVSACMLFTTQTLAAEKKHEIAVVAKVTGIPWFTRMEVGVNEAAKKLNVNAYQ 64 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP P + QV++I + + + +AIIV L P LK+A ++G+ VLT +S P+ Sbjct: 65 VGPATPDPAQQVKVIEDLIAKNVDAIIVVPNDAKVLEPVLKKAQEKGIVVLTHES---PD 121 Query: 123 CR--SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 R + + + +D A+ + +K A + S TV N W A + Sbjct: 122 QRIGQWDVETIDSEKYAQANMDELAKAMG-NKGGYAIYVGSLTVPLHNAWADYAIKYQKE 180 Query: 181 EHPGWEIVTTQFGY-NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA-AENLKND 238 ++P VT + + KS T ++K Y + II + A QA A+ D Sbjct: 181 KYPEMFEVTPRLPVAENIDKSYSTTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKD 240 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 ++A+VG + P PY+ RG +K+ LWD G V +A+ LL K + L I G Sbjct: 241 QIAVVGIAMPAQAAPYLMRGDIKKALLWDPKDAGFAVVEIANQLL--NGQKVTEDLTIDG 298 Query: 299 VGQVEV-SPNSV 309 +G+ +V S N V Sbjct: 299 LGKADVDSKNGV 310 >UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding protein n=46 Tax=Gammaproteobacteria RepID=A7ZI69_ECO24 Length = 327 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 20/325 (6%) Query: 15 LGIAAISMNVQAAERIAF-IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQ 73 LG A IS +QAAE++ I K+ G+ +F G G +AGK GV+ + GP+ Q Sbjct: 15 LGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVNASQVGPSSTDAPQQ 74 Query: 74 VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP 133 V++I + + + NAI + + L P K+A G+ VLT +S +P ++ I Sbjct: 75 VKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSA-NWDIEIIDN 133 Query: 134 AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH-PGWEIVTTQF 192 + V+ A+++ K + S TV N W + K KEH P VT + Sbjct: 134 EKFAAEYVEHMAKRMG-GKGGYVIYVGSLTVPQHNLWA-DLLVKYQKEHYPDMHEVTRRM 191 Query: 193 GYNDAT-KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNV 250 ++ S +T ++K Y DL A+++ +N A +A E +KVA+ G P+ Sbjct: 192 PVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQ 251 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 ++ G + E +D G VA LLK +K G L+++ +G+ +V + Sbjct: 252 AASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPG--LEMQNLGKADVDMD--- 306 Query: 311 GYDYEADGNGIVLLPERVIFNKENI 335 I+ + ++ NK+NI Sbjct: 307 --------KRIIRFHKVLLVNKDNI 323 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 5/267 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGK--ELGVDVTYDG-PTEPSVSGQVQLINNFVNQGY 85 +A +PK VG F+ + GA A K E VDV +DG E V+GQV L+ NF+ QG Sbjct: 44 ELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGV 103 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 + ++ +A L ++A+ +G+ V+ DS T P+ + + + Sbjct: 104 DGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPENVPVFATDNVAAAERATEYLV 163 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 Q+ +D KVAF P T N E + KE+P ++V Q ++ ++LQ E Sbjct: 164 EQLGEDGGKVAFIPFQPG-TATNDTRTEGFKNVLKENPQVKLVAEQSSESNYNRALQVTE 222 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 IL A+ DLDAI A + + AA+A + K ++ IVG+ T V G V Sbjct: 223 DILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGVVSALI 282 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTG 291 + + G V A +++ G G Sbjct: 283 AQNPFRMGYDGVNAAVKMIRTGEQVEG 309 >UniRef50_C5EPZ5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPZ5_9FIRM Length = 347 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 10/225 (4%) Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 P E + QV+LI N +++ +AI V+A D L P L+ A ++G+ V+T D+D K + R Sbjct: 73 PDEATAQEQVRLIRNLIHEQVDAIAVAANDEDALAPVLREAREKGISVITLDADVKADSR 132 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 S YI +LG LV +A + + + +QN+W+ K ++ E G Sbjct: 133 SIYIKPVDAEKLGRALV-RSACDICSGSGQWCILSAGSRSANQNEWMYWMKKEL--EESG 189 Query: 185 WE---IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-V 240 ++ +V FG K+++ E +LK Y ++ I + + AAA + +K V Sbjct: 190 YKDMRLVDIAFGEGVYDKAVKETERLLKNYPEVKVICSLSTEGIKAAADVVKKQGKEKTV 249 Query: 241 AIVGFSTPNVMRPYV---ERGTVKEFGLWDVVQQGKISVYVADAL 282 ++G P+ M Y+ E +WD V+ GK++ +V+ L Sbjct: 250 KVIGLGLPSQMAEYIGDGEEDICPVMYIWDPVEMGKVAGFVSMGL 294 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 11/237 (4%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F+ S GA++AG+ELGV+V + GP E + QV ++ N +N+ +A+ ++A+ PD L Sbjct: 51 FWRSVEAGAKKAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALA 110 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFY 159 K+AM + V+T+DS+ K + S +I G M + A+ +N K KVA Sbjct: 111 VVAKKAMDAKIPVVTFDSNVKGDITSSFIATDNKVA-GAMAGEQLAKLIN-GKGKVAIVS 168 Query: 160 SSP---TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDA 216 +P T ++ +EA AK +P +I+ TQF D +K+L I+ A D+ Sbjct: 169 HNPGTTTAIEREAGFREALAK----YPDIKILNTQFSDGDKSKALAITLDIINANPDIAG 224 Query: 217 IIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQG 272 I + ++ A+ E KV +VG + + ++E+G + + D G Sbjct: 225 IYGTNEPSIFGIAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMG 281 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%) Query: 7 KKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 K + LS + I +S+ A I I K V +++ G + AGK LGVD + P Sbjct: 3 KLLVFLSVVLITGLSL----ALTIGVIGKSVH-PYWSQVEQGVKAAGKALGVDTKFFVPQ 57 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + ++ Q+Q++ +F+ +G + I ++ P + P +K+A++ G+ V+T D+D+ R Sbjct: 58 KEDINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTDSPDSGRYV 117 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 YI GT G + +++ K KV S T + Q ++ K IA E Sbjct: 118 YI--GTDNYQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIADSE--IE 173 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGF 245 IV D +++ AE L A+ DLDA A P+ A +N K KV IV F Sbjct: 174 IVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGKVGKVKIVCF 233 Query: 246 -STPNVMRPYVERGTVK 261 +TP++++ YV+ G ++ Sbjct: 234 DTTPDILQ-YVKEGVIQ 249 >UniRef50_Q1M9D2 Putative substrate-binding component of ABC transporter n=3 Tax=Rhizobium RepID=Q1M9D2_RHIL3 Length = 332 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 6/290 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 IA ++ + A + + K+ G+ +F + G Q+AGK+ +DV+ GP + QV+L Sbjct: 19 IATPNLAMAADPVMVTVVKIAGIPYFGALERGLQEAGKQFNIDVSMTGPANIDPAQQVKL 78 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + + + + + I + + P LKRA G++V+ + + E R + + + Sbjct: 79 LEDLIAKKVDVIGLVPLDVKACEPVLKRAQAAGIKVIVHEGPEQ-EGRDWDVELIDSTKF 137 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF-GYN 195 G + + A+++ ++ V + + T N+W A A +P +V +F G + Sbjct: 138 GEVQMQSLAKEMGEEGDYVVYV-GTLTTPLHNKWADAAIAYQKAHYPKMNLVADRFPGAD 196 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPY 254 + + +T +LKAY L I+A +N AA A E + +VA++G P+ + Sbjct: 197 EIDSAYRTTIDVLKAYPKLKGILAFGSNGPIAAGNAVKEKHLSKRVAVIGTVLPSQAKDL 256 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 + G ++E +W+ + G V VA +L K D +D+ G+G+ V Sbjct: 257 IMDGVIREGFMWNPREAGSAMVAVARLVLD--GTKIEDGMDVPGLGKATV 304 >UniRef50_A9KIX1 Putative sugar ABC transporter, substrate-binding protein n=4 Tax=Clostridiales RepID=A9KIX1_CLOPH Length = 367 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 6/224 (2%) Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 P + Q+ INN ++QG + I ++A D L PAL A +G+ VL+ DS T R Sbjct: 88 PKSATAEDQITCINNAISQGVDCIAIAANDTDALEPALTEAKNQGIHVLSLDSATNANSR 147 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEHP 183 ++NQ Q+ L+D A ++ A ++ T T+QN W+ K + ++ Sbjct: 148 KVFVNQAGTTQIAQALMD-AILDISGGSGDWAVLSAASTATNQNAWIDGMKTVMQDSKYS 206 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAI 242 ++ +G ++ S E IL A ++ I AP + AAA+ ++ + KV + Sbjct: 207 KLNLIGVYYGDDEYQASCDQTEAILAADPNIKVICAPTTVGIMAAAKVLQDKGLSGKVKL 266 Query: 243 VGFSTPNVMRPYV---ERGTVKEFGLWDVVQQGKISVYVADALL 283 G P+ M Y+ ++ + LW+ +Q G ++ Y + +L+ Sbjct: 267 TGLGLPSEMADYIGDDDQHSCPYMFLWNPIQLGNLAAYASISLV 310 >UniRef50_A8RTG6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTG6_9CLOT Length = 342 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 18/298 (6%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G +Q ++ G + P PS Q+ LI N +++ AI V+A L P L +A + Sbjct: 52 GFKQTVEDAGKNCIVLYPDHPSAQEQIHLIQNLIDEKVEAIAVAANDEYALTPVLTQARE 111 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 +G+ V+T D+D + RS YI+ +LG LV R + + + +Q Sbjct: 112 KGISVITLDADVEAGSRSIYISPVDARELGKELVREVDR-ICGHSGQWGILSAGSRSANQ 170 Query: 168 NQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 N+W+ K ++ E+ +V +G + K+ + A +L+ Y DL + + Sbjct: 171 NEWIYMMKQELQNLEYRDLRLVDIAYGEGEYEKAAEKANLMLETYPDLKVMCCLSTEGIK 230 Query: 227 AAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKE-----FGLWDVVQQGKISVYVAD 280 AAA + + KV ++G P+ M YV G+ E +W+ + G+++ YV Sbjct: 231 AAADVVKARGQASKVKVIGLGLPDQMEDYV--GSDPEDICPVLYIWNPMDLGRVAGYVCL 288 Query: 281 ALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 L + + GD+ + G DY DG V+ E + + ENIG + Sbjct: 289 ELSEGRIEERGDQELLLG--------GRTYPMDYGHDGGLEVIAGEPIKVDSENIGYW 338 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 10/251 (3%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 IA +PKLV FF G +Q KELGV Y P + + QV++I + + + +AI Sbjct: 78 IAMVPKLVH-PFFEDCRKGGEQKAKELGVTFEYVAPQQADPALQVKIIEDLIRKKVHAIS 136 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 +S P + P + M++G+ ++T+D+D+ R YI GT + G + ++ Sbjct: 137 ISPNEPKSVEPVIAEGMKQGILMMTFDADSPNSQRVMYI--GTDNKAAGKTMGETMAKLL 194 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 + KV + NQ ++ K + P ++V Q +D K L +E +L+ Sbjct: 195 NGRGKVGIITGGLGALNLNQRIEGFKEGVG---PNIQVVDVQATDDDLQKGLSVSEAMLR 251 Query: 210 AYSDLDAIIAPDANALPAAAQAAENL----KNDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 A+ DL+ I A P AQ ++ + K+ IV F + ++ G + + Sbjct: 252 AHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAIQEGIIAATMV 311 Query: 266 WDVVQQGKISV 276 VQ G ++V Sbjct: 312 QRPVQMGVLTV 322 >UniRef50_A6X767 Periplasmic binding protein/LacI transcriptional regulator n=36 Tax=Proteobacteria RepID=A6X767_OCHA4 Length = 336 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 12/299 (4%) Query: 30 IAFIPKLVGVGFF---TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 IA + K+ G+ +F +G Q+A + V T GP + Q+Q++ + V +G N Sbjct: 34 IATVVKISGIPWFDRMNTGVEAYQKANPD--VVATQSGPATADAAQQLQIVQDLVAKGVN 91 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 A+ V + P L KRAM+RG+ V+T ++D + + + A G L + A Sbjct: 92 ALAVVPMDPAVLEGTFKRAMERGIIVVTHEADNQVNTMAD-VEAFDNADYGTALNERLAE 150 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT-TQFGYNDATKSLQTAE 205 + K K F S QWV + AK++P ++V ++DA + + A+ Sbjct: 151 CMGK-SGKWTTFVGSLGSRTHMQWVGSGEEN-AKKYPDMQLVDPNNESFDDANGTYEKAK 208 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFG 264 IL+ + DL N + +A + + KV +VG PN +E G + G Sbjct: 209 EILRKHPDLKGFQTSAGNDVLGVGRAIDEAGLSGKVCLVGTGLPNPSADLLESGAITAIG 268 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 WD + G VA LL+K +K G L ++G +V V + +G GNG+V+ Sbjct: 269 FWDPQKAGMAMNAVAKLLLEKKEVKEGTDLGVEGYNKVSVKKGAGEG--LLVIGNGMVI 325 >UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NES6_EUBSP Length = 350 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 26/307 (8%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 +F G +Q K+ G++V+ P + Q+ ++ + + QG +AI + PD L P Sbjct: 63 WFDDMTTGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGVDAICIVPNDPDALVP 122 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 +++A + G+ V+T ++ E + + G + + A+ ++ K + A F Sbjct: 123 TIEKAKESGIVVVTHEAPGIAENVDLDVEAFVNEEFGKLFGEKLAKSMDG-KGQYAGFVG 181 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT-------KSLQTAEGILKAYSD 213 T+ W K A I + +P E VT + Y D K+L+ ILKAY D Sbjct: 182 GLTMETHMAWYKAAIEYIKENYPDMECVTEE-PYEDGNSVDGAHDKTLE----ILKAYPD 236 Query: 214 LDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGK 273 + + A+ E K D V++V + P++ Y+E G++K W G Sbjct: 237 IKGLFDCSAHGGGICEALQEKNKTDDVSVVSLALPSMSATYLEDGSMKAGLAWRPADAGY 296 Query: 274 ISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKE 333 + Y A L ++TG L I G ++V +G+ + F+ + Sbjct: 297 ATCYAAYLLASGQKVETGTDLKITGYEDIQVK-------------DGVAYGNAPLEFSAD 343 Query: 334 NIGKYDF 340 NI Y F Sbjct: 344 NINDYKF 350 >UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUT5_GARVA Length = 341 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 134/312 (42%), Gaps = 11/312 (3%) Query: 9 IALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGK--ELGVDVTY 62 +A +SA G + + Q+++ ++ + K G+ +F +G ++ GK E V+V Sbjct: 14 LAPMSACGSGGLIGSKQSSKNGKIKMVLVAKQEGIPWFDDMRSGVERFGKDHEGEVEVKQ 73 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P + Q Q+I++ ++Q AI+V P L P +K+A +G+ V++ + + Sbjct: 74 IAPDSGDSAKQAQMISDLISQNVKAIVVVPNDPQALKPVIKQAKAKGIVVISHEGGNIAD 133 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 Y I G A + K K+A S T+ W K K+ I KE+ Sbjct: 134 DVDYDIEAFKNKDFGEGFCKPLADGIG-GKGKIAAIVGSKTMETHMAWYKACKSLIEKEY 192 Query: 183 PGWEIVTTQ---FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 P V+ + ND T + E IL A+ DL + +A A + N Sbjct: 193 PDISFVSDEPYEDNNNDDTARKVSTE-ILNAHPDLKGLFGTSVSAGANMAAVLKERGNKN 251 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + P+V PY+ G VK W G ++ +A +K + G L++KG Sbjct: 252 VFVSSLGIPSVDMPYINEGWVKYAKAWRPADAGYAALSLAYNKIKGKKISNGTNLNVKGY 311 Query: 300 GQVEVSPNSVQG 311 ++V + V+G Sbjct: 312 EDIQVDGHQVRG 323 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 14/278 (5%) Query: 8 KIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 + ALL+ A+ MN A + RIA IPK V V FF NGA+ A +LGV + Sbjct: 25 QFALLAIPLTLAVQMNATAKDVKDLRIAVIPK-VAVPFFDDCNNGAKAAADKLGVQYQWV 83 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 P S QV+++ + +++ + I +S P + A+K+A+ G++V+T+DSD+ Sbjct: 84 VPQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVTFDSDSANSG 143 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 RS YI GT G + + + + +VA + N+ + K ++K +P Sbjct: 144 RSMYI--GTINSAAGETMGESMAKAIDGEGEVAILTGQLGAANLNERITGIKKSLSK-YP 200 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ--AAENLKNDKVA 241 ++V T+ +D K++ T E + + + L I PA ++ A + + K A Sbjct: 201 KIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVSKVMATKEFGSKKGA 260 Query: 242 IVGFS---TPNVMRPYVERGTVKEFGLWDVVQQGKISV 276 + F+ P+ ++ V+ G ++ + V GK++V Sbjct: 261 VKVFAFDDLPDTVKG-VKEGYIQGIMVQRPVTMGKLAV 297 >UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5N5_9CLOT Length = 353 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 28/308 (9%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 +F G +Q K+ G++V+ P + Q+ ++ + + QG +AI V P+ L P Sbjct: 66 WFDDMATGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGVDAICVVPNDPEALVP 125 Query: 101 ALKRAMQRGVRVLTWDS-----DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKV 155 +++A + G+ V+T ++ D + ++ +N+ + G + + A ++ K K Sbjct: 126 TIEKARESGIVVVTHEAPGIAGDVDLDVEAF-VNE----EFGQLFGEKLASAMDG-KGKY 179 Query: 156 AFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK---SLQTAEGILKAYS 212 A F T+ W K A A I + +P E V+ + Y D + A ILKAY Sbjct: 180 AGFVGGLTMETHMAWYKAAVAYIEENYPDMECVSKE-PYEDGNSIDGAHDKALEILKAYP 238 Query: 213 DLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQG 272 D+ A E K D + +V + P++ Y+E G++ W G Sbjct: 239 DIKGFFDCSAQGGGICETLQEKNKTDDIKVVSLALPSMSATYLEDGSMAAGLAWRPADAG 298 Query: 273 KISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNK 332 + Y A L ++TG L I G ++EV +G+ + F+ Sbjct: 299 YATCYAAYLLASGQKVETGTDLKITGYEEMEVK-------------DGVAYGNAPLEFSS 345 Query: 333 ENIGKYDF 340 +NI Y+F Sbjct: 346 DNINDYNF 353 >UniRef50_Q2RRZ3 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Alphaproteobacteria RepID=Q2RRZ3_RHORT Length = 349 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 4/247 (1%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 +V + IA + K+ G+ +F GA+Q G + G D GP++ + QVQL+ N + Sbjct: 39 DVGKSYSIATVVKVDGIAWFDRMREGAKQFGADTGHDTWMVGPSQADAAAQVQLVENLIA 98 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 QG +AI V S + L P LK+A RG+ V+ ++ + + G L++ Sbjct: 99 QGVDAICVVPFSVEALEPVLKKARDRGIVVIAHEASNITNA-DFVLEAFDNLAYGAKLME 157 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF-GYNDATKSL 201 + + K + K S T QN+W+ A A P E T + Y+DA Sbjct: 158 VLGTYM-KGEGKYVTTVGSLTSKSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTDY 216 Query: 202 QTAEGILKAYSDLDAII-APDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + +L Y D+ I+ P + A +E DK+ G +V Y+ +G + Sbjct: 217 NKLKEVLTTYPDIKGILGGPMPTSAGAGRLISERGLKDKLFFAGTGLVSVAGEYLSKGDI 276 Query: 261 KEFGLWD 267 + WD Sbjct: 277 QYIQFWD 283 >UniRef50_A9R0Y3 Carbohydrate uptake ABC transporter 2 (CUT2) family, periplasmic carbohydrate-binding protein n=44 Tax=Proteobacteria RepID=A9R0Y3_YERPG Length = 367 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 8/284 (2%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 + + K+ G+ +F G + G+ LGV+ GPT + QV+ I + + + + I Sbjct: 69 LGVVVKVGGIPWFNVMEQGIKAEGQALGVNAWQVGPTTADPAEQVRAIEDLIAKKVDVIG 128 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 V L P LKRA + G++V+T +S + + T + + DMA Q Sbjct: 129 VVPNDAKVLEPVLKRAQEAGIKVITHESPGQINADWDFELLDTQSMGANHMKDMA--QCM 186 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT-KSLQTAEGIL 208 ++ K A F S TV N+W A A +P +V +FG ++ S++TA +L Sbjct: 187 GEEGKYAMFVGSLTVPLVNEWADAAIAYQKANYPKMVLVEDRFGVAESVDDSMRTANDLL 246 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 + DL I++ + A +A + KND + G TP +E+G + + + Sbjct: 247 SKHKDLKGIMSFGSQGPIGAGRAIDKRKKNDTTCVFGTFTPGQGIKLLEKGAIDGGYISN 306 Query: 268 VVQQGKISVYVADALLK----KGSMKTGDKLDIKGVGQVEVSPN 307 + GK+ V VA A++ K +K GD +IK G +S N Sbjct: 307 PMVAGKVFVQVATAMMNGEPIKDGVKLGDMGEIKTQGNTILSDN 350 >UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=9 Tax=Bacillales RepID=C6CRC9_PAESJ Length = 337 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 14/269 (5%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 E+ + L G+ ++ +G G + A + LGV V Y G T+ V ++ ++ + + Sbjct: 44 EKYVMVNFLAGIDYWKNGLKGFEDAAEALGVSVEYRGSTQYDVQEEMMVLEQVIARSPAG 103 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY-YINQGTPAQLGGMLVDMAAR 146 I VSA+ + L PA+ +A++ G+ V+ +D+D P ++Y YI GT G+ Sbjct: 104 IAVSAIDSEALNPAINKAVEAGIPVVMFDADA-PRSKAYSYI--GTNNYNAGVTAARKMA 160 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 ++ KV + P + + + + + KE P ++V G D S Q Sbjct: 161 ELTGGTGKVGVI-TLPNQLNHQERTRGFEETLEKEFPDLQLVGIADGKGDQMISEQKVRD 219 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVK---- 261 +L ++DL I +AN A A L K D+V I+ F T V+ GT+ Sbjct: 220 LLSKFTDLSGIFVTEANGGVGAGNAILRLNKLDQVKIISFDTDKGTLDMVKSGTISATLA 279 Query: 262 ----EFGLWDVVQQGKISVYVADALLKKG 286 G W ++Q + ++ + + G Sbjct: 280 QGTWNMGYWSLMQLFHLRNHIVNPMSDNG 308 >UniRef50_A7B0G4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0G4_RUMGN Length = 395 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/319 (21%), Positives = 138/319 (43%), Gaps = 46/319 (14%) Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 G Y P E +V+ QVQ+++ + Q +I +S G K+A + G+ +++ D Sbjct: 82 GQKTVYKSPAETTVAAQVQMLDELITQKVASITISTNGDAGYDEVFKKAKEAGIPIVSVD 141 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAA----------------------RQVNKDKAK 154 S+ P+ R ++NQ A +G LV A + D+ K Sbjct: 142 SEASPDYRVCHVNQAETADIGSYLVQAAVLITLGVDYPGDGKMEETVQSELKSYKGDEIK 201 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI---VTTQFGYNDATKSLQTAEGILKAY 211 + +S QN W+ + +++K+ ++ + ++G +D T+S A+ + A Sbjct: 202 LGVLSASIDTPVQNSWIAAMEDELSKDFYAGKVSKELDKKYGNDDLTESTTQAQAFI-AE 260 Query: 212 SDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKE--------F 263 + +D II+P + AA QA ++ N ++ + G P+ M+ ++ + ++ Sbjct: 261 NSVDCIISPTTVGIAAAGQALKS-SNSEIKLTGLGIPSEMQSFMPKSADEDAFDYVCPYM 319 Query: 264 GLWDVVQQGKIS---VYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNG 320 LWDV+ G +S Y A G+ G ++ E + Y+ G+G Sbjct: 320 MLWDVIHLGAVSGAATYAAVEGTFDGT--EGSSFEMDAFRDYEATT-----YEAYRSGDG 372 Query: 321 I-VLLPERVIFNKENIGKY 338 VL + +F+K N+ ++ Sbjct: 373 TAVLAGDPFVFDKSNMAEW 391 >UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8Z7_9FIRM Length = 329 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 17/313 (5%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAI 88 IA PK +G+ ++ G ++ + G +V GPT + V+ Q+ I + + G +AI Sbjct: 32 IANTPKCIGISWWDRMQVGNERFTEATGNEVYQSGPTGDADVAVQISSIEDAIASGVDAI 91 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V P + L +A+ + V++ +++ E Y + + G ++D+ A Q+ Sbjct: 92 TVIPSDPSAVETTLAKALDNDIVVISHEAE-GLENTDYDLEAFVNEEYGAHMMDLLAEQM 150 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + V + T + QW + A + + +P V + S A+ ++ Sbjct: 151 GSEGGYV-IMMGTLTASSHQQWTEGAIKRQEEMYPDMYQVCDPVEGSSQEASYNAAKEVI 209 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 AY ++ I D N P A A E K+ ++A+ G + + Y+ GT+K F WD Sbjct: 210 AAYPEIGGFIGCDTNNPPGIAMAVEEAGKSGEIAVTGTCLVSQAKDYLNSGTIKTFTFWD 269 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPER 327 G+ +A +L +++ G L + G V N + G + Sbjct: 270 PADAGEAMCALAVKVLDGETIEDGINLGVDGYEACTVKDNIIYGEAW------------- 316 Query: 328 VIFNKENIGKYDF 340 V +N+G YDF Sbjct: 317 VDVTTDNMGDYDF 329 >UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Bacteria RepID=C2KTG0_9ACTO Length = 349 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 6/274 (2%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 RIA +PK +F G ++ + G+DV GP + Q Q+I + + Q +AI Sbjct: 46 RIAIVPKDATNPWFVRMEEGVKKYAADSGLDVFQRGPAATDATQQAQVIRDLIAQKVSAI 105 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V V P L P LK A G+ V+T + ++ + Y I + GG ++D A + Sbjct: 106 GVVPVDPGALEPVLKEARDAGIVVITHEGASQKNTQ-YDIEAFSNEAYGGFIMDNLADGM 164 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ---FGYNDATKSLQTAE 205 ++ T N+W +++P +++ Q + A + Q A+ Sbjct: 165 GQEGVYTTMV-GHITNASHNEWADSGVKHQKEKYPKMKLLEAQPRVESGDTAEGAYQAAK 223 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFG 264 +LKA+ ++ I + P A+A E + KV G P + ++ GTV Sbjct: 224 EVLKAHPEVRGIFGTSSFDAPGVARAIEEMGLKGKVFTSGTGMPQANKEILKNGTVHALT 283 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 LWD G +A +L + G L +KG Sbjct: 284 LWDPADAGYAMAALAKKVLDGEKISEGLDLGVKG 317 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-E 67 +ALL+ G + + ER+A + K + ++ GA+ AGKELGVDVT GP E Sbjct: 18 MALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAGKELGVDVTVVGPNAE 77 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 V Q+ +I + +NQ A++VS PD + P L+ A V VL D+D K + ++ + Sbjct: 78 SEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPVLLIDTDAKLKNKTSF 134 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 I GT G + + KVA + T ++ VK AKA A E G I Sbjct: 135 I--GTENYEAGYEGGKLLSSLLQKGDKVAIISGALGNTATDERVKGAKA--ALEEAGMVI 190 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 V Q +D TK++ E IL+ +D+ + A + Sbjct: 191 VAEQPADSDKTKAMSVMENILQKNNDVKGVFAAN 224 >UniRef50_C9D206 ABC transporter, substrate binding protein n=2 Tax=Rhodobacteraceae RepID=C9D206_9RHOB Length = 335 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 10/310 (3%) Query: 11 LLSALGIA-AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS 69 L+SAL + ++ V A + + K+ G+ +F + +G ++ ELGVD GP Sbjct: 15 LVSALALTVGMATTVVAETSMGIVVKIGGIPWFNAMEDGIERRAAELGVDAEMIGPVSAD 74 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 + QVQ I + + +G + I V L P LK+A G+ V++ + E + Sbjct: 75 PALQVQAIEDLIAKGVDVIGVVPNDEAALEPVLKKARDAGIIVISHEG-PGLENVDWNFE 133 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 + G + + + ++ A + S TV N W A A + + P +IV Sbjct: 134 LASAEGFGEAHAKLLSDK-TEEGGSYAVYVGSLTVPLHNAWADAAIAWMDENRPDLKIVG 192 Query: 190 TQFGY-NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFST 247 ++G + S TA ++ A DL +A + A +A E K ++ ++G + Sbjct: 193 DRYGVAENVDDSRSTALDLIAANPDLKGFLAFGSQGPIGAGRAVEERRKTGEIQVMGPFS 252 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 P R + G + +W+ Q G++ V + + L+K ++ G DI G+G VE P+ Sbjct: 253 PGQGRKMIHSGVLTGGYMWNPAQAGEVFVTLGEMLVKGEKIEAG--TDIPGLGVVE--PD 308 Query: 308 SVQGYDYEAD 317 V+G D D Sbjct: 309 -VEGRDIITD 317 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 14/279 (5%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP 68 ++LL A+ + ++ Q IA IP L GF+ + GA++A K LGV++ + G E Sbjct: 14 LSLLIAVAMYGLAQQ-QKKYTIALIPGLTTDGFYITMHKGAEEAAKRLGVELIFQGGPEF 72 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 S + Q+ ++N + + +AI+++ + L LKRA + G++++T D+ E Y Sbjct: 73 SPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITVDTFIG-ENGQYQT 131 Query: 129 NQGT---PAQL-------GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 +G P GG + A + +K KV P ++ +Q + K ++ Sbjct: 132 GKGNADFPLAYVASDNVEGGRIAARALAKAIGEKGKVYVSNVKPGISTTDQREQGFKEEM 191 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KN 237 K++PG ++ TQ+ NDA K+ L DL + + + AA +N K Sbjct: 192 -KKYPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAIGAANGVKNAGKR 250 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISV 276 V + F P + ++ GT+ + G+I+V Sbjct: 251 GAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAV 289 >UniRef50_A5FYX5 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FYX5_ACICJ Length = 345 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 6/237 (2%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 IA +PK + F + GA Q KELG VD+ + S + +++ N + + + + Sbjct: 40 IAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSDASQEAEIVQNLITRHVDGM 99 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 + A +P L + A+++G+ +TWDSD R Y G G+ + A + Sbjct: 100 AIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVY--YGVDNTKMGVSMGEQALKF 157 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 K KV P T+ N + K + K H G E + F +D TK+ + + +L Sbjct: 158 MGTKGKVILISGGPGATNLNARLAGVKQVMGK-HKGIEFLGPYFDNDDLTKAQELIDNVL 216 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL--KNDKVAIVGFSTPNVMRPYVERGTVKEF 263 A+ D AI+ A A A L KV I+G P VE+G V+ Sbjct: 217 TAHPDAGAIVDVAAVAFFGKLSAMPKLIANRGKVKIIGSDVLAPEIPLVEKGYVQAL 273 >UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G524_ABIDE Length = 370 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 13/278 (4%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 +F G +Q K+ G++V+ P + Q+ ++ N + QG NAI V P+ L P Sbjct: 83 WFDDMSTGVEQLKKDTGLNVSVQVPETGDAASQISIMENLIAQGVNAICVVPNDPEALIP 142 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 +++A + G+ V+T ++ + + G + + A+ + K + F Sbjct: 143 TIEKARKAGIVVVTHEAPGIAANVDLDVEAFVNEEFGKLFGENLAKAMGG-KGEFVGFVG 201 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT-------KSLQTAEGILKAYSD 213 T+ +W A A I++++P + +T + Y D K+L+ ILKAY D Sbjct: 202 GLTMETHMKWYNAAIAYISEKYPEMKCLTKE-PYEDGNSVDGAYNKTLE----ILKAYPD 256 Query: 214 LDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGK 273 + A+ E K + +V + P++ Y++ G++ W G Sbjct: 257 IKGFFDCSAHGGGICQALQEKGKAGDIKVVSLALPSMSATYLKDGSMSHGQAWRPADAGY 316 Query: 274 ISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + Y A L + TG L I G ++V N G Sbjct: 317 ATCYAAYLLASGQGVSTGTDLKITGYDNIKVDGNIAYG 354 >UniRef50_A1SLY7 ABC sugar transporter, periplasmic ligand binding protein n=4 Tax=Bacteria RepID=A1SLY7_NOCSJ Length = 348 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 80/316 (25%), Positives = 131/316 (41%), Gaps = 26/316 (8%) Query: 33 IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSA 92 + K G+G+F G ++ E G+D +GP+E + GQV +I + + Q AI V Sbjct: 51 VVKATGIGWFDRMEVGVKEWASETGLDAREEGPSEATNEGQVAIIQDLIAQKPTAISVVP 110 Query: 93 VSPDGLCPALKRAMQRGVRVLTWDS------DTKPECRSYYINQGTPAQLGGMLVDMAAR 146 GL L +A G+ V++ ++ D E + N AQ+ L Sbjct: 111 NDLAGLESVLGQARDAGIIVVSHEAVGIKNVDIDIEG---FENTAYGAQIMENL-----G 162 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK-SLQTAE 205 + + + F T ++WVK A K + PG V + + + A+ Sbjct: 163 ECTGGEGEYVQFVGRLTNGSHSEWVKGAYEKQQADFPGMTRVEDPIESEENEEVAYNKAK 222 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 +L Y D+ + A+A E K D V ++G S P+V Y+E G + + Sbjct: 223 ELLSKYPDIKGFQGSAGTDVVGIARAVEEAGKTDSVCVMGTSIPSVAGGYLESGAIDKIF 282 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLL 324 WD GK + VA L + G+++ G L + G S + G D GN V + Sbjct: 283 FWDPAMAGKAQLAVAKILAEGGTIEEGTDLGVPGY----ESLVKLDGADNAFAGNAGVAV 338 Query: 325 PERVIFNKENIGKYDF 340 + EN+ +YDF Sbjct: 339 ------DVENMDEYDF 348 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 11/217 (5%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA +A ++ G+D+ + GP ++ Q+ L+ + +AIIV ++ + P + +A++ Sbjct: 73 GAAEAAEKYGIDIEFTGPVRNNMEEQLNLLEKAIAARVDAIIVQGLNEERFTPVIDKAVR 132 Query: 108 RGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 RG+ V+T D+D R Y+ N +LG ++V+ K+ S Sbjct: 133 RGIPVVTIDTDAPNSQRLTYVGTDNLAAGERLGRLVVE-----TTGGIGKIGVIIGSDQA 187 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 +Q Q + K KI EH G EIV + +++Q A +L+ + ++ ++ A Sbjct: 188 ANQLQRLDGLK-KIVAEHEGLEIVDVRSSNISHMEAIQQAANMLRNHPEITIMVGTSATD 246 Query: 225 LPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 QAA+N D + I+GF + +G ++ Sbjct: 247 ALGVLQAAKN--RDDLTIIGFDNQKETLEAIRKGEIE 281 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 13/230 (5%) Query: 23 NVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINN 79 +VQA+E+ I PK + ++ + GA+ A KELG ++ + GP E V+ QV +IN+ Sbjct: 24 DVQASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVIND 83 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQL 136 FVN+ +AI+V+A + L P LKRA + G+ V+T DS + +I N+ + Sbjct: 84 FVNKKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFPISHIATNNKEAAKKA 143 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 +L ++ ++ + A + F + T + KE + + ++V Q+ +D Sbjct: 144 AEVLANIIGKK--GEVACIPFVAGAATSIARENGFKEGISN----YKNIDLVAVQYSQSD 197 Query: 197 ATKSLQTAEGILKAYSDLDAIIAP-DANALPAAAQAAENLKNDKVAIVGF 245 +++ E IL A+ +L I A +A A+ AA K V +VGF Sbjct: 198 YATAMKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGF 247 >UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic component n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZL4_HALOH Length = 318 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 11/210 (5%) Query: 19 AISMNVQAAE------RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSG 72 ++S++V A + IAF+PK + F AQ+ + LGV + + P S G Sbjct: 7 SLSLSVSAGKLPPKPLTIAFVPKSLDNPIFLDTLEAAQKEARRLGVRLEWVAPFTTSTEG 66 Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---N 129 Q++++ N + + + II+SA + L + +A++ G+ V T+DSD R +Y+ N Sbjct: 67 QIKVVKNLIQRRVDGIIISANDSNALKEIINKAVKSGIAVATFDSDVPGSDRLFYVGTDN 126 Query: 130 QGTPAQLGGMLVDMAARQ-VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 +LG L+ + R+ + +K KV + + VK AK +E EI Sbjct: 127 WRAGYELGKALLQVLKRKGIKTEKYKVMVLSGGKEALNLKKRVK-GFAKAVEEEIDIEIK 185 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAII 218 + +D + + E +K++ D+D I+ Sbjct: 186 DILYCNDDFQLANELVENYIKSHPDIDIIL 215 >UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Thermotoga RepID=B1LAH5_THESQ Length = 343 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 20/278 (7%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G + I Sbjct: 25 ILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKGVDGIG 84 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVDMAAR 146 +S P+G+ +KRA+ +G+ V+ +DSD+ R YI N + G ++ + + Sbjct: 85 ISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYIGTNNYNAGYEAGKLMAQLIEK 144 Query: 147 -QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA--KEHPGWEIVTTQFGY---NDATKS 200 + K ++A + N+ ++ K + + G EIV + +D+ K+ Sbjct: 145 YRAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPCDDDSAKA 204 Query: 201 LQTAEGILKAYSDLDA--------IIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMR 252 +Q + + Y+DLD + AP + +A E +K+ + +VGF T Sbjct: 205 IQIIRDVTRKYTDLDGWFMSGGWPLFAPKETVI-SALGGPERMKD--LLVVGFDTLLPEL 261 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 V+ G VK G +SV V + K G T Sbjct: 262 ELVKAGAVKGLVGQRPYDMGYLSVLVLYNMAKIGVENT 299 >UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY2_9FIRM Length = 324 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 7/258 (2%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNA 87 ++A + K F+ + GA+ A E +D+T DGP TE Q ++I V G A Sbjct: 35 KVALVAKSTNTDFWKAVFVGAEAAATEYNMDLTIDGPETEEDYETQNRMIAEAVENGAQA 94 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 ++ SA+ D PA++ A +GV+++ DS E + YI GT G + AA Q Sbjct: 95 LVFSAIDFDANAPAIEEAADKGVKIVVIDSAVNTEDVATYI--GTDNYSAGQMAAEAALQ 152 Query: 148 VNKDKAKVAFF-YSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 + KV Y + Q++ + E EIV T +A+ + + Sbjct: 153 GTEGTLKVGIVNYDVNSANGQDR--ERGAVDTFAESGRAEIVATIHTLAEASSAQEDTRK 210 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 +L+ + +++A++A + AAQA E L + + +V F + V ++ G V + Sbjct: 211 MLQDHPEINALLAFNEPTSVGAAQAVEELHLQNALWMVAFDSNLVTIDALQTGVVDALVI 270 Query: 266 WDVVQQGKISVYVADALL 283 + + G V A LL Sbjct: 271 QNTYEMGYFGVQSAYKLL 288 >UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C7R7_THENR Length = 350 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 17/247 (6%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G + I Sbjct: 25 ILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKGVDGIG 84 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVDMAAR 146 +S P+G+ +KRA+ +G+ V+ +DSD+ R YI N + G ++ + + Sbjct: 85 ISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYIGTNNYNAGYEAGKLMAQLIEK 144 Query: 147 -QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA--KEHPGWEIVTTQFGY---NDATKS 200 + K ++A + N+ ++ K + + G EIV + +DA K+ Sbjct: 145 YKAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPCNDDAAKA 204 Query: 201 LQTAEGILKAYSDLDAIIAPDA------NALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 +Q + Y+DLD A +A N + +A + K ++ IV F T Sbjct: 205 IQILRDASRKYTDLDGWFASNASLVAPPNTIISALGGPQRAK--ELLIVAFDTLEPELEL 262 Query: 255 VERGTVK 261 V+ G +K Sbjct: 263 VKAGVIK 269 >UniRef50_A9GIG1 ABC-type sugar transport system, periplasmic component n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIG1_SORC5 Length = 339 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 20/239 (8%) Query: 34 PKLVGVGFFTSGGN--------GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 PK+V + F T+ + G ++ +E V V P+ + Q Q++ N +QGY Sbjct: 46 PKIVKLAFVTNNASEFWKIAQAGVRKYEQESKVQVDVKMPSNGTTEEQNQILENLSSQGY 105 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVD 142 +AI VSA++P P L + ++ +++T+DSD R YI N LG +V Sbjct: 106 DAIAVSAIAPADQVPVLNKVAEKS-KLITFDSDAPASSRLLYIGTNNHEAGKALGAHIVK 164 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 + D K+A F + + + Q ++ + IA ++ EIV + D K+ Sbjct: 165 LLP-----DGGKMAVFVGTLSADNAKQRLQGIQDAIAGKNI--EIVDKREDNTDRAKARS 217 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTV 260 E I+ A+ DL + + PA A A E L K KV F +E GT+ Sbjct: 218 NVEDIINAHPDLKLVAGLWSYNGPAIAAAIEALGKKGKVLAAVFDEEEETLTAIENGTI 276 >UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPH3_9BACL Length = 329 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 13/263 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I F+P FF S GAQQ K+LGV + Y+G + S S Q +N V++ NA+I Sbjct: 44 IGFVPGETTDPFFISMAYGAQQEAKKLGVKLIYEGASTYSPSAQTPYVNAMVSRHVNALI 103 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP----ECRSYYINQGTPAQLGGMLVDMAA 145 V + P +K+A+ G++VLT DS R N+ A L MA Sbjct: 104 VCPTDLTAMIPPIKQAVNAGIKVLTADSTISDASLLTSRITSDNEQGGAAAADFLGSMAH 163 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 Q V SP ++ V A++ K++P ++V ++ T++ Q A+ Sbjct: 164 GQ-----GVVGVLDPSPGISTDKARVDGFIAEMKKKYPKIKVV-IEYDNEQTTQAEQLAQ 217 Query: 206 GILKAY-SDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEF 263 ++ Y L I D + AAQ + + V IVG+ ++ G + Sbjct: 218 DLMLHYGKSLVGIFGTDDTSASGAAQGVRSSGSATHVNIVGYDAEPAEVQDLKEGMISAL 277 Query: 264 GLWDVVQQGKISV-YVADALLKK 285 + +G+++V Y +AL K Sbjct: 278 IAQKPMIEGELAVEYAVEALEHK 300 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 8/241 (3%) Query: 9 IALLSALGIAA-ISMNVQAA--ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 ++ L GI A I+ +V+A +I +I K + + G + AGK +G P Sbjct: 58 VSQLPVTGIGAQIATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQAP 117 Query: 66 TEP-SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 T SV QVQL+ N + Q +AIIV +G+ +++A GV VLT + P Sbjct: 118 TTADSVEEQVQLMENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGT---PAAE 174 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 ++ G G + A K K ++ + + ++ E+ G Sbjct: 175 DTFLRTGVDYYESGYTMAKAVADKLGGKGKFIILEGPAGASNAIERLNGINTGLS-EYEG 233 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 EIV +Q T+ + E +++ Y+D+DA+IA + + A QA V + G Sbjct: 234 IEIVASQTANFKRTEGMSVTENLIQQYTDIDAVIACNDESALGAVQALTAANMSDVLVCG 293 Query: 245 F 245 F Sbjct: 294 F 294 >UniRef50_Q92L85 Putative periplasmic binding ABC transporter n=1 Tax=Sinorhizobium meliloti RepID=Q92L85_RHIME Length = 337 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 25/237 (10%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAER-IAFIPKLVGVGFFTSGGNGAQQAGKELG-VD 59 TL +A L+A G+ A N AA+R A + K++ F G + A K+LG V Sbjct: 6 TLTAALSVACLAA-GLTAPQAN--AADREFALVFKVLNNAFSPPIQQGCEAAAKKLGDVT 62 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 TY GPTE + QVQL + V +G + VSA +P + +K A +G+ V+T+D+D Sbjct: 63 CTYLGPTEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDV 122 Query: 120 KPE---CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTD---QNQWVKE 173 PE RS YI GT G+ + + KD V +P + + Q +++ Sbjct: 123 LPEDAGLRSTYI--GTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIRD 180 Query: 174 AKAKIAKEHPGWEIVTTQFGY-----------NDATKSLQTAEGILKAYSDLDAIIA 219 A + K+ G E +T Q G+ +D T + Q ++ +L A +A Sbjct: 181 TLAGVTKDK-GAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVA 236 >UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F740_THELT Length = 337 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 15/311 (4%) Query: 33 IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII--V 90 + K + +F G +Q GK+ GV GP+ + QV +I + QG +AII Sbjct: 39 VVKSIAFNWFMRMEEGVKQFGKDYGVTAFMQGPSVADSAQQVAIIEQLIAQGVDAIINVP 98 Query: 91 SAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNK 150 V + L K+AM G+ V+T ++ T Y + G ++ A+++ Sbjct: 99 YGVQENDLVQ--KQAMDSGIIVVTHEAAT-ARYAHYDVEAFDNKSYGEEMMRQLAQRMGY 155 Query: 151 DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKA 210 + V F S T N+W A+ K P + + D + T + +LK Sbjct: 156 EGEYVQFV-GSLTNASHNEWQDAARVYQEKNFPKMKCIGKFESREDIEAAYTTMKDLLKK 214 Query: 211 YSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 Y ++ ++ A + +A + +DK+ +VG S + ++ G V WD Sbjct: 215 YPNIKGVLGSAAGDVVGVGRAVQEAGLSDKIVVVGTSIVSYAGELLKTGAVDLAMCWDPA 274 Query: 270 QQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVI 329 G + VA LLK ++ G L + G ++ + N G ++ ++ Sbjct: 275 LAGYAANVVAYKLLKGEKIEEGMDLGVPGYTKIHIVKNEY--------GVPVIYGQGWIL 326 Query: 330 FNKENIGKYDF 340 + N+ KY+F Sbjct: 327 IDASNMDKYNF 337 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 65/318 (20%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKL--------------VGVGFFTSGGNG 48 L F IAL+ +L A + + + + PKL G+ ++ G Sbjct: 9 LSIFLAIALIVSLAYALVPNSKDVTQASSGNPKLKGSPKEEYYMVTFASGIEYWKGCFKG 68 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 + A GV Y G + V+ QV ++ + + I+V+ +PD L + A+++ Sbjct: 69 MKAAADLYGVKAIYTGAPQFDVNQQVTVLRQVIAKKPAGILVTCANPDALKAPIDEAIKK 128 Query: 109 GVRVLTWDSDTKPECRSYYINQGT-------PAQLGGML-------VDMAARQVNKDKAK 154 G+ V+T+D+D+ R + G LG +L + A Q+N ++ K Sbjct: 129 GIPVITFDADSPKSLRYSVLETGNYNAGAMAARYLGKLLGGKGEVGISTVAAQLNHEQRK 188 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 F + + KE PG ++V+ ND+TK+ + +L+A+ ++ Sbjct: 189 QGFIDT-----------------LKKEFPGIKVVSIVNDENDSTKAARGVAAMLQAHPNI 231 Query: 215 DAIIAPDA-NALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGK 273 I DA + A E K K+ IV F T ++GT+ D+++QG Sbjct: 232 KGIFCTDAPGGVGVATAIKEANKVGKIKIVSFDT--------DKGTL------DLIKQG- 276 Query: 274 ISVYVADALLKKGSMKTG 291 V DA + +G+ G Sbjct: 277 ----VIDASIAQGTWNMG 290 >UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5ENT7_9FIRM Length = 627 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 9/214 (4%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GAQ+ + LGV VT+ P + Q++ +NN V GY AI+V+A PD + ALK A Sbjct: 376 GAQKEAEALGVSVTFMSPNTKDDAQQIECVNNAVAGGYEAIMVAANGPDAISSALKEAQS 435 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPA-QLGG--MLVDMAARQVNKDKAKVAFFYSSPTV 164 GV+++ DS + + + A + G ML + A V + ++ Sbjct: 436 SGVKIVYVDSPANVDAEATFSTDNKAAGRTAGEEMLKALEAAGVTSGSIGIINVNAA--- 492 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 TD + ++E + A E G+ ++ TQ+G DA KS AE + + I + + Sbjct: 493 TD-SCVMREEGFRSAFEGKGFTLLETQYGEGDAAKSQSIAENYIT--QGVVGIFGCNEGS 549 Query: 225 LPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 A A + D + VGF + + ++ G Sbjct: 550 TTGAGNAIKASGKDGIIGVGFDKSDAILGLIDDG 583 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 7/161 (4%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GAQ+A ELGV V + P + Q++ +NN V+ G AIIV+A PD + ALK A Sbjct: 85 GAQKAAGELGVTVQFMAPNTKDDAQQIECVNNAVSAGAKAIIVAANGPDAISSALKEAQS 144 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPA-QLGG--MLVDMAARQVNKDKAKVAFFYSSPTV 164 GV+++ DS + + + A + G ML ++A V + ++ Sbjct: 145 SGVKIVYVDSPANVDAEATFSTDNKAAGKTAGEEMLKALSAAGVTSGSIGIINVNAA--- 201 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 TD + ++E + A E G+ ++ TQ+G DA KS AE Sbjct: 202 TD-SCVMREEGFRSAFEGKGFTMLETQYGEGDAAKSQSIAE 241 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 11/262 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 IAF+ +VG F+ + GAQ+ LGV V GP + + Q ++++ V +A++ Sbjct: 62 IAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQGPQKFDPTLQKPILDSIVASKPDALL 121 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ-GTPAQLGGMLVDMAARQV 148 V+ + L++A G++V+ D+ T SY ++ + + GG A +Q+ Sbjct: 122 VAPTDVQAMQMPLEQAAAAGIKVVLVDTTTNDP--SYAVSAIASDNEGGGRAAFEAIKQL 179 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + + KV P ++ + K + +A E PG+ V Q+ +ND + Q L Sbjct: 180 HPEGGKVMVMGLDPGISTTDARTKGFEEAVA-EDPGFTYVGVQYSHNDPATAAQLIGAQL 238 Query: 209 KAYSDLDAIIAPDANALPAAAQAA---ENLKNDKVAIVGFST-PNVMRPYVERGTVKEFG 264 + DL + A AN A A + K+++VA+VGF PN ++ E GTV+ Sbjct: 239 QRDPDLVGVFA--ANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQALRE-GTVQALV 295 Query: 265 LWDVVQQGKISVYVADALLKKG 286 D GK V A L+ G Sbjct: 296 AQDPGTIGKFGVDEAVTALEGG 317 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA++AGK V++ Y GP SV QV+L+ + + IIV + + P + +A+ Sbjct: 73 GAKEAGKNYDVNIEYIGPLRTSVDEQVKLLEKAIASRVDGIIVQNLKDEAFIPLIDKAIS 132 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 R + V+T D+D R Y+ GT G L+ A V++ + + T T + Sbjct: 133 RNIPVITIDADAPKSRRIAYV--GTNNFEAGQLLGKAV--VSRVEGERELGVMIGTDTSE 188 Query: 168 NQWVK-EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 NQ ++ + + EHP ++V+ ++ AE +L+ + + ++ A Sbjct: 189 NQRLRLQGFLSVIAEHPRLKVVSVASSNISRIQASIQAEQMLRKHPHISVMVGTSALDAI 248 Query: 227 AAAQAAENLKNDKVAIVGF 245 A +NL + I GF Sbjct: 249 GIRMATKNLHRQDIQIFGF 267 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 18/176 (10%) Query: 48 GAQQAGKELG-VDVTYDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRA 105 GA+ KELG V +T+ P E + + QV+++ + +NQ +AI+++ L P +++A Sbjct: 69 GAEAKAKELGNVQLTFRAPAEKADPNEQVRMMEDAINQKADAILIAPTDQTALTPVVEKA 128 Query: 106 MQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNK---DKAKVAFFYSSP 162 G+ V+ DS K + ++ A +MAA ++ + K K+A + P Sbjct: 129 FDAGIPVILIDSPVKTDKYVSFV-----ATDNIKAAEMAADKLGELLGGKGKIAIISAQP 183 Query: 163 ----TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 T+ +N + K ++ +++P +I+TTQ+ D ++L A IL A+ DL Sbjct: 184 GSGTTIMRENGF----KDRLKEKYPDIQIITTQYSMGDKNRALNQALDILTAHPDL 235 >UniRef50_C6WPU6 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Actinomycetales RepID=C6WPU6_ACTMD Length = 335 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 20/223 (8%) Query: 29 RIAFIPK-LVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 RIA I G F+ NGA AG++LG V Y+ +P Q L++N V QG Sbjct: 53 RIAVITHGTAGDAFWNVVKNGATDAGEQLGAAVDYNSDGDPGK--QATLVDNAVAQGVGG 110 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+VS +PD L PA++ A++ G+ V+T +S RS G A + G D+A + Sbjct: 111 IVVSMANPDALRPAVEGAVRAGIPVVTINSGG---ARSAEF--GAIAHV-GQEEDLAGEE 164 Query: 148 VNK-----DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 K K+K+ T NQ A+A G E T Q N+ T + Sbjct: 165 AGKRLKAEGKSKLLCVIHEAGNTGLNQRCDGARAGF-----GGETTTLQVDINNPTDAEA 219 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGF 245 G L+ +DA++A ++ + A A A K A+V F Sbjct: 220 RITGALRTDPSVDAVLALNSQ-VAATAVTAGRSAGSKAAVVTF 261 >UniRef50_UPI0001C368C5 ABC sugar transporter, periplasmic binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368C5 Length = 383 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 15/259 (5%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G ++ ++ GV+ P P + Q++++++ + Q Y+AI V L +LK A+ Sbjct: 93 GVKKFSEDYGVNAVMIEPANPDAASQLEMLDSLLTQDYDAICVVPNDSSALETSLKGALD 152 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA---KVAFFYSSPTV 164 + V V+ ++ C Y Q G + + A+ + K V F T Sbjct: 153 KKVVVIGHEASDLVNCL-YDTEAFNAEQYGSAIAEQLAQAMGKSGVYGDMVGF----TTS 207 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT----AEGILKAYSDLDAIIAP 220 + Q+ + A + K +P +V ++ +++ T A+ +LK+ ++ I Sbjct: 208 VNHMQYSEAELAYMKKNYPDITVVNDTLPTCESQETVTTAYEQAKQVLKSNPEVTGFIGH 267 Query: 221 DANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVA 279 + AQA E L KV IV TPN+ Y+E+GTV +WD + G + A Sbjct: 268 ASGDGLGIAQAVEELGLAGKVHIVCGGTPNMYIDYLEKGTVDCVSVWDPMISGYVMCQAA 327 Query: 280 DALLKKGSMKTGDKLDIKG 298 +L ++ GD D+ G Sbjct: 328 YNVLS--GVEIGDGADLSG 344 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 3/190 (1%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQG 84 A + IA IPK + ++ GAQ AG + G + + G T+ + GQV+L+ +F+ +G Sbjct: 61 AEKVIAVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVKLVEDFIQRG 120 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 +AI++S V+PDG+ P L++A G+ V+ D + ++ T + G Sbjct: 121 VSAIVISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPRSTVS--TNDEAAGKFAAEK 178 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 +++ D S+ Q ++ + +P ++I+ T +G D ++ Sbjct: 179 LKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDELGTYPNYKIIGTYYGKGDRNQTYNIT 238 Query: 205 EGILKAYSDL 214 + IL + D+ Sbjct: 239 QDILTSNPDI 248 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 21/229 (9%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF G ++ KELGV V + P + V+ Q I +F+ Q + +IV + P Sbjct: 55 FFIDIDEGIKEKAKELGVKVIVNDPDQ-DVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVP 113 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA-QLGGMLVDMAARQVNKD---KAKVA 156 A++ A ++ + V+T D+ E + Y+ GT + G L + + +++ K+++A Sbjct: 114 AVEGAFEK-MPVVTVDAVLNTENITSYV--GTVSYDAGKKLGEYTKKYIDEKLGGKSEIA 170 Query: 157 FFYSSPTVTD-----QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 VTD Q Q + K + K +I+ +Q GY D +SL T E ++++ Sbjct: 171 I------VTDLKSQIQMQRIDGFKDAL-KGSANVKILNSQPGY-DREESLNTVENLIQSN 222 Query: 212 SDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 D+D I A N++ A A E+ KN V IVGF + GT+ Sbjct: 223 PDVDIIYATAENSVLGAKAALESAKNKDVKIVGFDLTEEASSGITDGTI 271 >UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VC4_BRAJA Length = 314 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 11 LLSALGIAAISMNVQAAE-RIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEP 68 LL+ + +A ++ AA R +PK + FF +G + KELG ++ Y GP E Sbjct: 9 LLAGIAVAMMATPAFAANYRFVIVPKAMNNPFFDFARDGCLKRAKELGNIECVYKGPVEH 68 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 + Q Q+I +FV Q + + +S + +++ A G+ V+T+D+D R YI Sbjct: 69 EPATQAQIIQDFVTQKVDGLAISVADVAAMTKSIEAATAAGIPVITFDADAPGSKRIAYI 128 Query: 129 ---NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 N+ LG LV M D K A P + + V + + W Sbjct: 129 GTNNKEFGVALGKQLVKM-----RPDGGKYAMVSGGPGAKNLAERVDGVREALKGSK--W 181 Query: 186 EIV--TTQFGYNDATKSLQTAEGILKAYSDLDAII 218 V + F +D ++Q + A DL AI+ Sbjct: 182 TEVAGSPTFCNDDPALAVQQMTDMRTATPDLAAIV 216 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 3/233 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 R+A I + G F+T+ GA+ A ++LG + GP E S + Q ++N V +AI Sbjct: 48 RLALIVGVTGDEFYTTMECGARAAARKLGARLNVQGPEEFSPAAQTPILNAVVQSNPDAI 107 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +++ + ++ A+ + + V+ D+ + E + + G M + A Q+ Sbjct: 108 LIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEIALARISSDNVEGGRMAGEALAEQI 167 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 K KV P ++ +Q K+ + K++P E + T++ +D T++ L Sbjct: 168 GG-KGKVLLISVKPGISTTDQR-KQGFEEAIKQYPDIEYLGTEYCNDDPTQAASITTSTL 225 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTV 260 +A+ DL I + + A K D+V++V F + RG + Sbjct: 226 QAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVSVVAFDASPTQVEDLRRGNL 278 >UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F3L8_THELT Length = 321 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 20/257 (7%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG--VDVT-Y 62 +K L+ A+ + +S V A IAF+ K F+ GA+ A +L V VT Y Sbjct: 1 MRKFLLVLAM-VFTLSALVFGAYEIAFVVKATDSDFWQYTIVGAKNAEHDLQGLVKVTVY 59 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS---DT 119 P+E + QV ++ + + +AI++S+ S PAL +A Q+G++++ D+ DT Sbjct: 60 GPPSEADIDKQVAILEDVIRTKPDAIVISSTSSHATAPALNKAYQQGIKIILIDNFVYDT 119 Query: 120 KPECRSYYINQGTPAQLGGML-----VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 Y+ T ++GG L V++ + K KV S V Sbjct: 120 -----GYHSFLATNNKVGGGLAAEKVVELLKKSGRPLKGKVGLISSMAGVQVLIDRDDGF 174 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAE 233 A++ + P EI+ T++ ND K+ AE ++ AY D L AI A + + A+ E Sbjct: 175 TARLKELAPDLEILPTRYVDNDIAKAAAAAEDLITAYGDQLVAIFADNNHTGDGVARVIE 234 Query: 234 --NLKNDKVAIVGFSTP 248 NL++ +A+ S P Sbjct: 235 EQNLQDKVIAVAYDSDP 251 >UniRef50_A8F7U7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F7U7_THELT Length = 348 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%) Query: 9 IALLSALGIAAISMNVQAAE--------RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + LL++L + ++ VQ + RIA + ++ FF GAQ +ELGV + Sbjct: 8 VFLLTSLVVISVFAQVQLPKKFENPKNVRIALVREVGEGSFFERYLAGAQSMARELGVTL 67 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 + ++ V +I NF+ Q +AII+ PD L P +K A+ RG+RV+T+D Sbjct: 68 -LEATAHGDMARMVTMIENFITQRVDAIIIDHGRPDPLMPKIKEALDRGIRVVTFD 122 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/286 (22%), Positives = 138/286 (48%), Gaps = 12/286 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 T H ++LL+ + +A++ ++ + + K F+ + G + A KELG + Sbjct: 44 TRHFIYALSLLACVSSSALAKDLN----LPVVSKGFQHEFWQTVKMGTEAAAKELGDKTS 99 Query: 62 YDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 Y GP E ++ Q+QL+ N + Q N ++++A+ + L P ++ A RG++V+T+DS Sbjct: 100 YVGPADETQIAEQIQLVENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGIN 159 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAK-VAFFYSSPTVTDQNQWVKEAKAKIA 179 + ++ +A++ NK K +A + + ++++ E ++ Sbjct: 160 SDIPVSFVATNNRKAGAQAADALASQVNNKGKVGIIAHVAGTSSAIERSEGFME---RMK 216 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA--AENLKN 237 +++P +++ Q+ D K++ +++A DL I + + A A ++NLK Sbjct: 217 EKYPDIKVLPVQYSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQNLKG 276 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 KV ++GF + + +++ G ++ F + D Q G + +A L Sbjct: 277 -KVKVIGFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKTLNAAL 321 >UniRef50_A3DI69 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Clostridium RepID=A3DI69_CLOTH Length = 372 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 9/205 (4%) Query: 48 GAQQAGKEL---GVDVTYD--GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL 102 G A KEL GV V Y+ GP +P QV I + QG++ I V P+ A+ Sbjct: 99 GIDAAVKELAEKGVTVDYEWYGPAQPDAVDQVNSIETAIGQGWDLIAVDVNQPELTGEAI 158 Query: 103 KRAMQRGVRVLTWDSDTKPEC-RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS 161 A+ +G+ V + + P C R++++ P G L ++ K ++A + Sbjct: 159 NNAVAKGIPVAVFGTSDVPNCDRAFFVGNTDPYGDGCALAKAVCEKMGG-KGQIAILAGT 217 Query: 162 PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 + ++ K IAK +P EIV Q ++ K++ E L+AY +L I+ + Sbjct: 218 IGALAHEERLRGFKDTIAK-YPDIEIVDEQRDNDEVEKAISITESWLQAYPNLGGILCNN 276 Query: 222 -ANALPAAAQAAENLKNDKVAIVGF 245 +N + A A+ K+ K+ I G Sbjct: 277 MSNPVGACQAVADAGKSGKIVIGGM 301 >UniRef50_C7IMM2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IMM2_9CLOT Length = 352 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 55/99 (55%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 IA +PK + F ++ G+ELG+ V + GP + + Q+ ++ + + + + I+ Sbjct: 57 IAMVPKSLDNPVFLDALEQGERVGRELGIKVEWLGPMQSDTNVQIAIVESLIRRRVDGIV 116 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 +S + P + P + +A++ G++V T+DSD+ R +Y Sbjct: 117 ISCIDPAKIKPVIDKAVKAGIQVATFDSDSPDSSRLFYC 155 >UniRef50_B8I3I9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I3I9_CLOCE Length = 348 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 55/98 (56%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 IA +PK + F ++ G+ELG+ V + GP + + Q+ ++ + + + + I+ Sbjct: 57 IAMVPKSLDNPVFLDALEQGERVGRELGIKVEWLGPMQSDTNIQIAIVESLIRRKVDGIV 116 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 +S + P + P + +A++ G++V T+DSD+ R +Y Sbjct: 117 ISCIDPGKIKPVIDKAVRAGIKVATFDSDSPGSNRLFY 154 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 4/256 (1%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP 68 +A LSA G + + IA + K F+ S GA A + G VT++GP Sbjct: 17 VAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDAAAKYGATVTFNGPDND 76 Query: 69 S-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 S V Q ++ N +N+ +A+ ++ + L PA++ A + + +D+ + + Sbjct: 77 SQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIPLFAFDTAFETNADAIT 136 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 T + G + + K K A S T + + K P E+ Sbjct: 137 STVKTSNREVGKVAAENLIALLNGKGKYAVIAHSQTDATSTERRDGFLDYMKKNAPDMEM 196 Query: 188 V-TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKN-DKVAIVG 244 V Q+ D K+ A IL+A DLDAI A + + AA E+ LK+ KV +VG Sbjct: 197 VGEVQYSNADQAKAQDIASAILQANPDLDAIFATNEATVVGAATPVESALKSGHKVLLVG 256 Query: 245 FSTPNVMRPYVERGTV 260 + + Y+ G + Sbjct: 257 VDSGKAQQQYIRDGVI 272 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 4/231 (1%) Query: 32 FIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVS 91 +P+ + ++ GA+ A +EL VD+ Y GP + ++ ++++ + II Sbjct: 54 LVPEELDNDYWRLVEKGAKAAARELDVDLEYIGPRQANIDEHLRILKKAAAAKVDGIITQ 113 Query: 92 AVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD 151 ++ P + + + + VLT D+D R YI GT G + A + + Sbjct: 114 GLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYI--GTDNYYAGFIAGRALVEDTQG 171 Query: 152 KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 VA S T Q Q V+ + + K IV + + ++ + ILK + Sbjct: 172 MVNVAIITGSLTAVHQQQRVRGFRDAV-KNEKRIRIVAVEESHITRVQAAEKTYTILKKH 230 Query: 212 SDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVK 261 +++A A A+ E + + I+GF T Y+++GT++ Sbjct: 231 PEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIE 281 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 11/227 (4%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYN 86 ++I I K F+ + GA+Q+G + G+ V+ GPT E ++ QVQL+ N +++G + Sbjct: 49 KKIDVIIKASDSSFWQTMIAGAKQSGGDFGLKVSTFGPTSETNIDQQVQLVENSISRGVD 108 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA--QLGGMLVDMA 144 ++++ S L A++RA + G++V+T DS + A Q G + ++ Sbjct: 109 GLVIAPNSSSALNSAIERARKAGLKVITVDSRVTTASEGFIGTDNLKAGMQAGKRMCELL 168 Query: 145 ARQVNKDKAKVAFFYSSP---TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 Q NK V S ++ D++ K+ +A P ++ ++ ND + Sbjct: 169 KAQ-NKTSGSVMIESSVAGIQSLVDRDSGFKQG---LANNCPQVKVTLQRYNNNDINTAA 224 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQA-AENLKNDKVAIVGFST 247 L A +L + A + + AA+A +N D V +V F + Sbjct: 225 SQVNDALTANRELAGVFADNNTSGVGAARAIQDNNVTDTVPVVAFDS 271 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 16/232 (6%) Query: 25 QAAERIAFIPKLVGVGF----FTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINN 79 QA + I +IP LV GF + + +GA+QA K+L V VT++GP TE V Q+ ++ Sbjct: 23 QAQQEI-YIP-LVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAA 80 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK---PECRSYYINQGTPAQL 136 + + AI +A+ P LK+A + V+ +DS P + N+ A Sbjct: 81 ALAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIPVTTTTTDNKAAAALA 140 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + +M + + + A V +S T D+ +I +P +IV+ Q+G D Sbjct: 141 ADKMAEMIGK--SGEVALVVHDQTSRTGVDRRDGFVN---RIKSAYPNIKIVSVQYGGGD 195 Query: 197 ATKSLQTAEGILKAYSDLDAII-APDANALPAAAQAAENLKNDKVAIVGFST 247 KS + + IL+A +L I A + +A+ E ++ KV I+G+ + Sbjct: 196 QLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDS 247 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 50/237 (21%) Query: 6 FKKIALLSALGIAAISM-NVQAA------ERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 F L+AL +AA S + Q A E+I + + + FF++ GA++A +G Sbjct: 11 FTAAVTLAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAASIGA 70 Query: 59 DV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 T D + ++ Q I+ F+ QG N I++SAV +G+ PA++RA Q G+ V+ D+ Sbjct: 71 TANTQDAQLD--LANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDT 128 Query: 118 DTKP-------------ECRSYYINQGTPAQLGG----MLVDMAARQVNKDKAKVAFFYS 160 K E Y+ + Q+GG +LVD Q +D+ Sbjct: 129 PAKSADAVVMTDAVQAGEKSCQYLFE----QMGGKGNVLLVDGTPLQTIRDR-------- 176 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAI 217 +T N V K+ PG ++V Q ND L +L A D+ I Sbjct: 177 ---ITGCNNVV--------KKFPGIKVVGQQASKNDRASGLAVTTDMLTATPDVQGI 222 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 10/255 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNA 87 RIA +PK F+ S GA +A +EL VDV + GP E + QV ++++FV QG + Sbjct: 42 RIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGVSG 101 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+++ + L ++ A Q + V+ +DSD + ++ A G + + + Sbjct: 102 IVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDHVSFVATDNEAA-GRLAGEHLGKA 160 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT-TQFGYNDATKSLQTAEG 206 + +D V Y + + Q++ ++ + PG + + Q+G + +E Sbjct: 161 IGEDGKVVVLRYQEGSASTQHR--EKGFLDAVRAMPGVTVASENQYGGATTESAFHKSES 218 Query: 207 ILKAYSDLDAIIA----PDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVK 261 +L A + IA P+ + QA KV VGF + + G ++ Sbjct: 219 LLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALREGDIE 278 Query: 262 EFGLWDVVQQGKISV 276 + + G ++V Sbjct: 279 ALVVQNPFNMGYVAV 293 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 26/296 (8%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAI 88 +A + K + ++ + GA A KELGV V GP E V GQ LI + + +G +A+ Sbjct: 41 VAVVLKALNSDYWKTVQAGANDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDAL 100 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA--QLGGMLVDMAAR 146 +V+ + P+ +A + + V+ D+D + + ++ G A +LGG + ++ Sbjct: 101 VVAPLQPNAAITTFDKAEKEKIPVVLIDTDANWDKKKSFVGTGNIAAGKLGGEYI---SK 157 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 ++ K + P D+ Q + A+ A E G ++V Q ++ K++ E Sbjct: 158 KLKKGDEAI-IIRGVP--GDRTQDERTQGAQKALEAAGIKVVEIQPANSEREKAISVMEN 214 Query: 207 ILKAYSDLDAIIAP-DANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 +L+ + ++ + D AL A + K + ++I +P+ ++ ++KE GL Sbjct: 215 LLQTHPNIKGVFCTNDEMALGAVKALQQAGKKNIISIGVDGSPDALK------SIKEGGL 268 Query: 266 WDVVQQ-----GKISVYVADALLK----KGSMKTGDKL-DIKGVGQVEVSPNSVQG 311 V Q GK V A +L+ + + TG L D + V + E N + G Sbjct: 269 TGTVAQNSYDIGKKGVETAVKVLRGEKVETRIDTGTTLVDKQNVNEQEAKLNKILG 324 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 8/171 (4%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G +QA K+LGV T+ P + + Q+ + +F+ G + I ++ P + P +++AM Sbjct: 44 GVKQAAKDLGVKATFFVPQKEDIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMA 103 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK-AKVAFFYSSPTVTD 166 +G+ V+T D+D R YI GT G + M + K KVA S T + Sbjct: 104 KGIPVITLDTDAPQSKRLVYI--GTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMN 161 Query: 167 QNQWVKEAKAKIAKEHPGWEIVTTQ---FGYNDATKSLQTAEGILKAYSDL 214 + ++ IA +V T+ + D +++ AE L Y DL Sbjct: 162 SLERIRGFMDGIASNK--RIVVVTKPALCDFEDTGRAVTLAEQALLTYPDL 210 >UniRef50_A3DCF2 Sugar ABC transporter (Sugar-binding protein) n=4 Tax=Clostridiales RepID=A3DCF2_CLOTH Length = 321 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 36 LVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSP 95 L G+ ++ G + A K +GV Y G T+ VSGQV ++ + Q I V+AV+ Sbjct: 48 LSGIDYWKYCFEGFEDAAKAIGVTAKYTGQTDTDVSGQVAVLEQVIAQKPKGIAVTAVNS 107 Query: 96 DGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKV 155 L + A+++G+ V+ +DSD+ RS Y+ G A G + VN K K+ Sbjct: 108 TALADTINSAIEQGISVVCFDSDSPTSNRSAYLGTGNYAA-GQKAAEFLVPLVNY-KGKI 165 Query: 156 AFFYS 160 A Y+ Sbjct: 166 AVLYT 170 >UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinobacteria (class) RepID=Q1AUT8_RUBXD Length = 351 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 14/265 (5%) Query: 39 VGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN-QGYNAIIVSAVSPDG 97 +GF G ++A +ELGVD GP S QV + ++ Q + + VS+ S D Sbjct: 79 LGFANPIREGVEKAKRELGVDAELIGPANGSAQEQVSELQTLISQQKVDGLAVSSASNDA 138 Query: 98 LCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAF 157 L P + +A G+ +++++++ + ++ Q Q G + +++ K KV Sbjct: 139 LKPVIAQAYNAGIPIISFNTNNPGSKQMAFVGQDL-VQSGRFEAEQLRKELGDRKGKVVV 197 Query: 158 FYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ---TAEGILKAYSDL 214 F +V W + + G E + + N + Q + + A D Sbjct: 198 F----SVDTGAGWSNDRFSGFEAGMEGAEGIQIEGPINSGNEPRQAFNAVQNTMTANPDA 253 Query: 215 DAIIAPDANALPAAAQ-AAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGK 273 AI + D ++ AAA+ +N K ++ +VGF ++ G ++ + V+QG Sbjct: 254 IAIASLDCCSVDAAAKWVQQNGKKGEIIVVGFDVLPQTADFIRNGVIQFTISQNPVEQGY 313 Query: 274 ISVYVADALLKKG----SMKTGDKL 294 SV + + LKK + TG KL Sbjct: 314 QSVKILNDFLKKNKPLRDVNTGTKL 338 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 19/235 (8%) Query: 59 DVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 ++ + GP TE + G+V ++ + +NQ + I+++A L ++ A+ + ++T DS Sbjct: 65 NIIFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTVDS 124 Query: 118 DTKPECRSYYI---NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 + + +I N+ +Q D+ A + K KV P V+ Q K Sbjct: 125 GVDSDKVASFIATDNEKAASQAA----DVCAELIGKS-GKVGVVNFVPGVSTAVQREKGF 179 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + ++K H G E++ TQ+ +D +K++ E IL A D+ AI A + + AQA Sbjct: 180 RDGMSK-HSGIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVAQA--- 235 Query: 235 LKND----KVAIVGF-STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK 284 LK KV +V F + P+ ++ +E G++ + + + G+ V AL+K Sbjct: 236 LKGKGVAGKVKVVAFDADPDEIKG-IEDGSITALIVQNPYKMGEEGVKNVLALMK 289 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 10/263 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNA 87 A IPK F+ S +GA+QAG+E+G +T+ GP+ E Q+ ++ F+N + Sbjct: 143 HFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKITFRGPSKENDRDEQINVVQGFLNARVDG 202 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+++ + D L +K A + GV V+ +DS + + T GG L A Sbjct: 203 ILLAPLDADALVRPVKEASRAGVPVVIFDSGLNTDPGDFVSYVATDNFEGGKLAGEAMAN 262 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT-QFGYNDATKSLQTAEG 206 +K ++ +E E+ ++++ Q+ ++ A+ Sbjct: 263 ALGEKGGDVILLRYEQGSESTHQREEGFLYSIAEYSNIRVLSSDQYAGTTTESAIDKAQA 322 Query: 207 ILKAYSD-LDAIIAPDANALPAAAQAAENLKNDKVA----IVGFSTPNVMRPYVERGTVK 261 +L + D D I P A A L+ K+A +V F + + +R + G V Sbjct: 323 LLNRFGDEADGIC---TVCEPTAEGALRALRERKLAGKVKLVTFDSSDSLRESLSAGEVN 379 Query: 262 EFGLWDVVQQGKISVYVADALLK 284 L D V G +V A L+ Sbjct: 380 AIVLQDPVAMGYQAVKTMAAHLR 402 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 29/221 (13%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q+ + +F+ Q +AI+++ + G+ PA+ A + G+ V T D + + +S+ T Sbjct: 98 QLAQVQDFITQKVDAIVLAPTASAGIAPAVDLAKKAGIPVFTIDIKAEGDVKSHV---AT 154 Query: 133 PAQLGGML-VDMAARQVNKDKAKVAFFYSSP--TVTDQNQWVKEAKAKIAKEHPGWEIVT 189 GG L AA +V K KVA S + D+ + K+A A E+P ++V Sbjct: 155 DNYAGGKLAAKYAAEKVLNGKGKVAIITYSEVQSCVDREKGFKDALA----EYPNIKVVD 210 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFS- 246 + A K+ + IL + DLD I A P A A +K V ++GF Sbjct: 211 VENCSGSAEKAANLTQDILLKFPDLDLIFAVGD---PFAVGAVSTIKAAGRNVKVIGFDG 267 Query: 247 TPNVMRPYVERGTVKEFGLW--DVVQQ-----GKISVYVAD 280 P ++ +K GLW DVVQ GK+ +AD Sbjct: 268 NPEAIQ------EIKNHGLWVADVVQHPDQIGGKVIDLIAD 302 >UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YAA5_DICT6 Length = 331 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 19/231 (8%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG------VDVTYDGPTEPSVSGQVQLINNFVNQ 83 A+IPK + F G +GA + +EL V+V Y + Q +++ + V + Sbjct: 29 FAWIPKALNNPVFELGRDGAFKRAEELSKKGPYKVEVLYVASVASDATEQARVVEDVVAR 88 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 + I +S P L + +A++ G+ V+T+D+D+ R Y+ G GG Sbjct: 89 KVDGIAISCNDPTALIDVINKAVEAGIPVMTFDADSPKSKRFTYL--GVNNYEGGKWAAK 146 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 + VA P + + ++ K +I K++P +IVTT Y+D + +Q Sbjct: 147 LLVRAMGTSGDVALLTGVPGALNLEERMRGFKDEI-KKYPKIKIVTTVACYDDINRGVQV 205 Query: 204 AEGILKAYSDLDAI-------IAPDANALPAAAQAAENLKNDKVAIVGFST 247 E ++ Y L + + ++P +AA K KV V F T Sbjct: 206 VEETMQKYPKLRGWFFVGLWPLLAERGSMPLWEKAA---KAKKVFTVAFDT 253 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 8/243 (3%) Query: 48 GAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GA++AGK+LGV+V G E ++GQ+ ++ N V A+++S L + A Sbjct: 55 GARKAGKDLGVNVPELGAQAESDINGQISILENAVAGKPAAVVISPTEFKALGKPIDEA- 113 Query: 107 QRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN----KDKAKVAFFYSSP 162 + V ++ DS + ++ Q G + D A + K++ ++ + P Sbjct: 114 AKSVPIIGIDSGADSKAFKSFLTTDN-VQGGRIAADGLAAAIKEMTGKEEGEIVILTNLP 172 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 V Q + +I +HPG +++ ++G AT L ++ A L + A + Sbjct: 173 GVGSLEQRREGFLDQIKTKHPGLKVIADKYGDGQATTGLNMMTDLITANPKLVGVFASNL 232 Query: 223 NALPAAAQA-AENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 QA AEN DK+ ++GF + + +++ G + + D + G + A A Sbjct: 233 ILAQGVGQAIAENKLGDKIKVIGFDSDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALA 292 Query: 282 LLK 284 + K Sbjct: 293 VSK 295 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 7/179 (3%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF A+ GK +G +V E V Q I+ F+ G I++ A DG+ P Sbjct: 54 FFQQESKTAESYGKSVGAEVLSQVANE-DVQTQSNQIDQFITAGVKFIVIDAADTDGVGP 112 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 A+KRA+ G+ V+ D+ +K + +N T + G + + K K+A Sbjct: 113 AVKRAVSAGIPVIGVDNQSK----NATVNITTDNKQAGEISCRSLADKLGGKGKIAILNG 168 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA 219 +P V+ + V K I ++P +IV Q G N +L A IL A DLD A Sbjct: 169 TP-VSAVDDRVTGCKG-ILGQYPDIKIVADQRGENSRDSALPIATDILTANPDLDGFFA 225 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 12/283 (4%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-G 64 FK AL+SAL A + + +IA + K + +F S GA++ KE +D+ Sbjct: 10 FKFSALISALPALAFAAD---KPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQVA 66 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTK-P 121 E S V L+ N + + +AIIV+ PA ++A + G+ ++ D D K Sbjct: 67 EKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKAA 126 Query: 122 ECRSYYINQ-GTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 E N G GG L + K VA P V D + K K Sbjct: 127 EAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGV-DNGEQRKGGALKAFA 185 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDK 239 E+P +IV +Q + ++L IL A +++ I A + N A A EN K Sbjct: 186 EYPDIKIVASQSANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVENAGLAGK 245 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 V + G+ + YV++G ++ D + + ++++ + AL Sbjct: 246 VLVSGYDGIPLAIEYVKQGKMQ--NTIDQLPKKQVAIAIEHAL 286 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGY 85 A +IA + K + FF GA++A KELG+D+ E S+ Q+Q+I + + + Sbjct: 48 ARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLIRMKF 107 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 +AI+++ L P LK A + G+R++ D+ E Sbjct: 108 DAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAE 144 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 12/241 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELG--VDVTYDG-PTEPSVSGQVQLINNFVNQGY 85 ++A + K + FF + NGA++ K D+ +G E + Q++++ + Sbjct: 37 KVALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVEQMIVSKV 96 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-RSYYIN---QGTPAQLGGMLV 141 +AI+++ L P +K+A+ G+ V+ D+ P+ +S +N G + G +V Sbjct: 97 DAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNVPFVGPDNRKGARMV 156 Query: 142 -DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 D A+++ A V PT T+ Q + A + A + G ++V+ Q G + K Sbjct: 157 GDYLAKRLKAGDA-VGIVEGVPTTTNAQQ--RTAGFQDAMKAAGAKVVSVQSGEWEIDKG 213 Query: 201 LQTAEGILKAYSDLDAIIAPDAN-ALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 A +L Y +L A++ + N A+ A + + KV +VG+ N ++P ++ G Sbjct: 214 NAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIKPMLKDGR 273 Query: 260 V 260 V Sbjct: 274 V 274 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 9/178 (5%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA++A ++ G+++ Y GP V ++++ + + II + + P + A + Sbjct: 68 GAREAAQQKGIELEYLGPARADVKEHIKILEMAIASKVDGIITQGLEENEFTPIINEAAR 127 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV---NKDKAKVAFFYSSPTV 164 G+ ++T DSD R Y+ GT G MA R++ + +A+VA S T Sbjct: 128 MGIPIITVDSDAPHSKRVAYV--GTDNYAAGY---MAGRELIAKSAGRAEVALITGSFTA 182 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 ++Q V+ K + K +PG I+ +S +A + + Y ++D + A Sbjct: 183 SNQKDRVRGFKDAV-KTYPGIHIIDIAESNISRIQSAASAYTLAQKYPEIDTFVGTSA 239 >UniRef50_C0CMP2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMP2_9FIRM Length = 366 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 5/210 (2%) Query: 49 AQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 A +A KE G Y+ + +V+ Q+ IN+F+ G +AI + A SP L +++A+ Sbjct: 83 AAEAAKEAGYISDYEIQNGDNTVNSQIAQINSFILDGVDAICICAASPTALNSTIQKALD 142 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 G+ V+ +DS + Y Q+G V+ A ++ V S DQ Sbjct: 143 AGITVVAFDSIV--DLDGVYTMDYPWEQIGKDSVEFVADKLEGKGNIVVVRGVSGAAPDQ 200 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 + +A K +P EIV G ATK+ + ++ + D+DA+I Sbjct: 201 GIYAGITEAM--KAYPDLEIVQEVIGEASATKTQEELTKVMASLPDVDAVITHCGGDAIG 258 Query: 228 AAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 A A E D I+G +T + ++E+ Sbjct: 259 AVNAFEQSGKDMPIIIGDNTAEFINWWMEQ 288 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 6/220 (2%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 F+ G Q+ GV + P ++ Q + + +F+ QG + I++ + + Sbjct: 73 FYVDLEKGMQEVADAQGVKLITQDPN-GDLAAQTKQVEDFITQGVDGIVLCPIDSNAAVT 131 Query: 101 ALKRAMQRGVRVLTWD-SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFY 159 + Q G+ ++T D + + S+ + T LGG L + KVA Sbjct: 132 EAETINQAGIPLVTTDIAVAGGDVASHIASDNT---LGGQLAAQFIGEQLGGTGKVALI- 187 Query: 160 SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA 219 ++PT+T + +A+++P EIV Q G + K L E IL++ D+ + A Sbjct: 188 NNPTITSLIERETGFTDTMAQKYPDIEIVAVQSGESKREKGLSVMENILQSNPDVQGVFA 247 Query: 220 PDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 + A QA + + D + IVGF Y++ G+ Sbjct: 248 VNDMMGLGALQAVQAAQRDDIVIVGFDATEEAVKYIKEGS 287 >UniRef50_A3K5X2 Putative periplasmic binding abc transporter protein n=1 Tax=Sagittula stellata E-37 RepID=A3K5X2_9RHOB Length = 330 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 20/211 (9%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 A +PK + FF +G +A +E+ GV Y GP E + Q+Q++ + + +G + I Sbjct: 28 FALVPKAMNNPFFDLARDGCYKAQEEIEGVTCEYIGPGEHTELEQIQIVQDLITKGVDGI 87 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE---CRSYYINQGTPAQLGGMLVDMAA 145 VS + + LK A G+ V+TWD+D + R+ ++ GT G+ + Sbjct: 88 AVSPSNAPAMAKTLKEAEAAGIPVITWDADLLEDDKGLRAAFV--GTNNYDIGVELAKLV 145 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG---WEIVTTQFGY-------- 194 + + D + + N+ +K A+ +A E G +++ Q G+ Sbjct: 146 QARHPDGGTICLQTGGAAAANHNERLKGARDTLAGEDMGEAPGDMLDGQGGWTEISGCPL 205 Query: 195 ---NDATKSLQTAEGILKAYSDLDAIIAPDA 222 +D ++Q IL A DL A ++ A Sbjct: 206 ITNDDGNVAVQGMTDILAANPDLTAFLSTGA 236 >UniRef50_A9D042 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D042_9RHIZ Length = 331 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 15/275 (5%) Query: 15 LGIAAIS---MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVS 71 G+ A+S M A + F+ + V F+ N + + +G+ T+ GP + + Sbjct: 24 FGLPALSTEAMAQAAGKEYVFLSIVTQVPFWVDYRNAMKDLEELMGIKATFTGPLDFDTA 83 Query: 72 GQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY--IN 129 Q + ++ + + I++ P L P ++RA++ G+ V D RS + IN Sbjct: 84 AQARQLDELIARRPAGILIFPGDPATLAPGVERAVEAGIPVTCCIGDIPNSPRSTFLGIN 143 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 ++GG +M A+ + + + +P+ ++ V+ K A+++P E+V Sbjct: 144 GVQAGRVGG---EMLAQAIGGKGKVILGTFPAPSTLER---VEGYKQIFAEKYPEIEVVD 197 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPN 249 D + + ++A D+ I D ++ AA A + IV + Sbjct: 198 VVNDKADPSYAPTAYLQSIQANPDIVGIGGTDGDSGKGAAIAVNEAGRKDIKIVAMDRND 257 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK 284 M PY+E GT+ +G V Q+ + +++A ++ Sbjct: 258 DMLPYIEDGTI--YGA--VAQKSYLEIFLAFHMMH 288 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 7/231 (3%) Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 E Q +++FV QG +A+I+S V D L A+K + G+ V+T +D + Sbjct: 85 ESQSDKQASQLDSFVAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQV 144 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 ++ G+ + GG + + K K+A P Q + K++P E Sbjct: 145 WV--GSSNENGGEIEMKYVAEKLGGKGKIAVL-RGPLGAFAEQGRFAGYETVLKDYPDIE 201 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP-DANALPAAAQAAENLKNDKVAIVGF 245 IV Q G +++ E +L A ++LDAI+ D AL A K D++ I G Sbjct: 202 IVFDQTGNWQREEAMALIENLLTAGTELDAIVCQNDGMALGALEAVKAAGKKDQITITGI 261 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 ++ G + D + QG ++ D +K +T +++DI Sbjct: 262 DAIVDALDSIKAGELDATCFQDAIGQGTNAL---DMAVKAARGETVERMDI 309 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 ++ S + AQQ LGVD+T P E + QV +I + + +AI+VSA S DG+ Sbjct: 62 WWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSMIEAAIEKKADAIVVSAASSDGVI 121 Query: 100 PALKRAMQRGVRVLTWD---SDTK---------PECRSYYINQGTPAQLGGMLVDMAARQ 147 PA+K+A + G++++ +D SDT +Y + QLGG Sbjct: 122 PAIKKAREAGIKIVNFDTRISDTSVIDAFVGGDDVAGAYKAGKYICEQLGG--------- 172 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + A + T D++ +A A E+PG ++V Q + K+ I Sbjct: 173 -EGEVAIITGLMEQSTGVDRHAGFMQACA----EYPGIKVVAEQGAEWSSDKAADVTTNI 227 Query: 208 LKAYSDLDAIIA 219 L A ++ AI A Sbjct: 228 LTANPNVKAIFA 239 >UniRef50_A9KSH9 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Clostridiales RepID=A9KSH9_CLOPH Length = 310 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 8/157 (5%) Query: 48 GAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 G ++A KELG +D + P + Q++ INN V G NAI+++A PD + ALK A Sbjct: 58 GCKKAVKELGNIDYEWLAPDVKDDAKQIECINNAVAGGANAILLAANGPDAVTSALKEAQ 117 Query: 107 QRGVRVLTWDSDTK-PECRSYYINQGTPAQLGG--MLVDMAARQVNKDKAKVAFFYSSPT 163 GV+++ DS P ++ + + G M+ + A + + K + ++ Sbjct: 118 SAGVKIIYVDSAADYPAIQTLATDNEAAGKTAGEEMMKGLTAAGIKEGKIGIVNVNAATA 177 Query: 164 VTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + +E + A E +E++ TQ+G DA KS Sbjct: 178 ----SCVAREKGFRSAFEGTSFELLGTQYGEGDAAKS 210 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 12/245 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDG-PTEPSVSGQVQLINNFVNQGYNA 87 + I K + FF + GA+ +E G ++ G E Q+ + NF+ QG +A Sbjct: 66 VGLIMKSLANEFFQNMMVGAEAHAEERGDYELLAVGMQNETDFESQINAVENFITQGVDA 125 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTKP-ECRSYYIN-QGTPAQLGGMLVDM 143 I+V+ + L+RAM+ G+ V+ +D DT E + + G ++G + Sbjct: 126 IVVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIELAFVGPDNRMGAEMAGN 185 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 A + + +V +P + Q + IA G E++ ++ + + ++ Q Sbjct: 186 ALGEALGEGGRVVIIEGNPGADNATQRRLGFEDAIATH--GLELLESRTAHWETEEANQV 243 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG----T 259 +L A+ DL ++A + + +A + D + +VGF + P +E G T Sbjct: 244 FAAMLTAHPDLQGVMAANDSMAIGVIEALDAAGRDDILVVGFDAVPAVLPMIEDGRMLAT 303 Query: 260 VKEFG 264 V +FG Sbjct: 304 VDQFG 308 >UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET05_9FIRM Length = 336 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 11/206 (5%) Query: 47 NGAQQAGKELGVDVTYDGPTEPS--VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKR 104 +GA++ ELG +VT P +P+ + ++ ++ + + QG +AI V+ V + + P + + Sbjct: 73 SGAEKKAAELG-NVTVVKP-DPAGDMQKEIAILEDLIQQGVDAICVAPVDANAIVPYIDK 130 Query: 105 AMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 + G+ ++ +D DT+ +C + ++ A G M D +++ + KV P V Sbjct: 131 VREAGIVLVDYDIDTEAQCDAKVLSDN--AAGGAMAADYLVQEMGT-EGKVLILTEVPGV 187 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDAN 223 T + + K ++A+ P E+V Q T E +L+A+ D+ I N Sbjct: 188 TTAEERIAGFKDRMAEIAPNVEMV-EQLSNGTRDTHRATTENMLQAHPDITGIFCFMGDN 246 Query: 224 ALPAAAQAAENLKNDKVAIVGF-STP 248 +L A N + D V I G+ +TP Sbjct: 247 SLGAYTACKTNNRQD-VLIAGYDATP 271 >UniRef50_UPI0001C358B9 putative sugar ABC transporter, substrate-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358B9 Length = 145 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 3/142 (2%) Query: 3 LHRFKKIA-LLSALGIAAISMN--VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 + RF IA +L+ IAA S V + A I K + +QA +E G Sbjct: 1 MKRFWLIAGILTIFCIAACSAAGMVTESPEYAVIMKSKDNQYNEEVAEAFRQAAEEAGYR 60 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 P QV L+ + + AI ++ L P LK AM +G+ + T DSDT Sbjct: 61 CEVLYPETARAQDQVILVRRMMRERVKAIAIAVSDEHALAPVLKEAMAKGIVITTLDSDT 120 Query: 120 KPECRSYYINQGTPAQLGGMLV 141 + + RS +++ P + G LV Sbjct: 121 EKDSRSIFVSPADPKETGAGLV 142 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 5/234 (2%) Query: 13 SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSG 72 S G AA S N ++++A +P + F+ S GAQ+ K+LG ++T P + + Sbjct: 31 SGSGSAANSAN---SKKLALVPGVQAEPFYISMQCGAQEEAKKLGYELTVQAPQKFDATM 87 Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q ++N+ + A++V+ + +++ RG +++ D+ K + + Sbjct: 88 QTSIVNSLGSNPPAALLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSLKDKSVAVSSVSSD 147 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 A+ G + A+ V V + + K + ++ K HP + V QF Sbjct: 148 NAEGGKLAAQTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDEL-KNHPNLKSVGIQF 206 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGF 245 N+ ++ L + DL I A + N AA N K KV +VGF Sbjct: 207 TQNEPEQAASKVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIGKVNLVGF 260 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 58/264 (21%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 11 LLSALGIAAISMNVQAAE-----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY-DG 64 ++ +G AI++N + I I + G + + N ++A K+L + V DG Sbjct: 14 VMGIMGQCAIAVNAASKTDDDTLNITLINQGSGQPYIAAYKNCFEKAEKDLNIKVNLVDG 73 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL-------TWDS 117 + + Q I N ++ G + I++S V P +C + A+ G+ V T D+ Sbjct: 74 GWD--ANQQANAIQNAISSGADGIVISPVDPSAVCTYVDEALDAGIEVCALTTQIGTGDA 131 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + + ++G +D+AA +++ K+A +P ++D + K+ + Sbjct: 132 EDPVYPETVGLVGHIETEVGRTAMDIAAEALDR-SGKIAIIEGTPGMSD-TEGRKKGIDE 189 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 KE+P E+V+ G K+ + I+++ +++ +I N AA+A E+ Sbjct: 190 ENKEYPDIEVVSRVCGEWVVDKAYTAMQNIIQSNPEVELVICHSDNMAVGAAKALEDADM 249 Query: 237 NDKVAIVGFSTPNVMRPYVERGTV 260 DKV IVG +++G + Sbjct: 250 TDKVKIVGIGGSKDALDLIKKGEI 273 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 17/269 (6%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPT-EPSVSGQVQLINNFVNQGYNA 87 I FIPK F+ NG ++A +E G +D+T+ GP Q++++ + G +A Sbjct: 29 IVFIPKSSDQMFWDLMRNGVERAMQEEGQIDLTWRGPAYNDDTDSQIRILQYYTRAGVDA 88 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+++ L +++A++ G++V+ DS ++ T G L AARQ Sbjct: 89 IVITPTDRSRLVGPVEQAVRMGIKVVVVDSALDGSGHLQFVT--TDNHASGQL---AARQ 143 Query: 148 VNK---DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 + + + +V + + + ++ P IV +G A K+ +A Sbjct: 144 LAELMGQRGRVVLLRTVAGSASTDDRARGFIDYLSANAPAISIVADVYGGGSAGKARHSA 203 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA----IVGFSTPNVMRPYVERGTV 260 +L +D DAI A + +A +A L+ +A +GF + + +E+ + Sbjct: 204 SALLAKSADFDAIFAVNESATDGMLRA---LREAGLAGRKRFIGFDSTPFLLEGLEKKEI 260 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMK 289 + D + G +++ A L+ +K Sbjct: 261 DGLIVQDPDRMGYLAIKAVVAALRNRPIK 289 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 11/219 (5%) Query: 50 QQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 ++A ++LG+++ ++ E GQ+ +N V G++AII+S + L P + A + Sbjct: 112 EEAAEDLGIEIRVFEADAEDDTQGQLDALNTMVTMGFDAIILSPIDGTNLIPGIVAANEA 171 Query: 109 GVRVLTW----DSDTKPECRSYY---INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS 161 + V+ D++ + + I Q + DM +R +D KVA Sbjct: 172 EIPVINLGPGVDAEALADAGGHLDGKITVNFEEQGSTVANDMISRM--EDGGKVAILAGL 229 Query: 162 PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 AK + + G E+V Q D K+ + + IL A+ DL I A + Sbjct: 230 EGAGQSVGRTNGAK-TVFENTEGVELVAAQACDWDTEKAYEATKDILTAHPDLKGIFACN 288 Query: 222 ANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 N AA QA + + N V + G + +E GT+ Sbjct: 289 DNMALAAVQALQEMGNKDVMVYGVDYTTDAKAAIEDGTM 327 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 10/188 (5%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q+ + +F+ +G +AI++S V G+ A+ +A + G+ V+T D E + T Sbjct: 73 QISDVEDFIVRGVDAIVLSPVDSKGVVGAIIKAKRAGIPVITV--DISAEGVEVDAHVAT 130 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAF--FYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 GG + +V K +VA + +V D+ KEA +K +PG EIV Sbjct: 131 DNYYGGRIAGETMAKVLNGKGQVAIIDYPVVQSVRDRVAGFKEAVSK----YPGIEIVAI 186 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIA-PDANALPAAAQAAENLKNDKVAIVGFSTPN 249 Q G ++L TA+ IL+A+ ++D I D AL + D V ++GF Sbjct: 187 QPGIT-RPEALNTAQNILQAHPEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGME 245 Query: 250 VMRPYVER 257 R V++ Sbjct: 246 EARNAVKK 253 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 8/246 (3%) Query: 41 FFTSGGNGAQQAGKELGVDVT-YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 FF + NG Q+ K+LGV VT +G +P+ Q+ + + + Q NAII++ L Sbjct: 58 FFVAMSNGVQEEAKKLGVQVTILNGNNDPAT--QLNQVEDLIQQHVNAIILNPTDSQSLS 115 Query: 100 PALKRAMQRGVRVLTWD-SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFF 158 A+++A + + V+T D S TK + + A G M D + + K +V Sbjct: 116 TAVEQANRAHIPVITLDRSVTKGNVACFIASNSVEA--GKMAADELIKALG-GKGQVVEL 172 Query: 159 YSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII 218 + + K +I K PG +V Q D +++L + IL+A+ ++ + Sbjct: 173 QGVIGTSAEADREKGFDEEIGKA-PGIRVVARQTANFDRSQALNVMQNILQAHPNIQGVF 231 Query: 219 APDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYV 278 A + A +A + + IVG V +G + VQ+G + V Sbjct: 232 AQNDEMALGALKAIQEAGKHNIKIVGIDGEKEAVNDVHKGLLYADIAQQPVQEGILGVEY 291 Query: 279 ADALLK 284 A L++ Sbjct: 292 AVKLVE 297 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 23/209 (11%) Query: 48 GAQQAGKELGVDVTYDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GA A K+ GV V ++ P + ++GQ+ ++NN V G + II++A +P L +K A+ Sbjct: 64 GADAAAKKFGVSVAFEAPASGTDLAGQIGMVNNAVTGGTDGIILAAQNPQALLKPVKSAL 123 Query: 107 QRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPT 163 + V+T DS P ++ N G A L D + K + A Sbjct: 124 AHHIPVVTVDSGLSPNISDCFLATSNVGAAAALAKYTAD----HLMGGKGQYA------- 172 Query: 164 VTDQNQWVKEAKAKI------AKEHPGWEIV-TTQFGYNDATKSLQTAEGILKAYSDLDA 216 + D N A+ K +P + + Q+ ND + L+ A +L Y L Sbjct: 173 IVDFNHTASTGIARPKGFMLGMKSYPHIKKMGPIQYSNNDVSAGLRIATTMLTQYPHLKV 232 Query: 217 IIAPDANALPAAAQAAENLKNDKVAIVGF 245 I + A A+A + + KV +VGF Sbjct: 233 IFGANDRAALGPAEAVQR-AHAKVKVVGF 260 >UniRef50_Q0SII4 ABC ribose transporter, substrate-binding component n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SII4_RHOSR Length = 322 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 85/209 (40%), Gaps = 42/209 (20%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF + G + A E V+V+ V+ Q I+ F+ Q ++IIV AV DG+ P Sbjct: 59 FFLAEGQAIETAAAEKRVEVSVQ-YANADVAVQSDQIDTFIRQKVDSIIVDAVDSDGIGP 117 Query: 101 ALKRAMQRGVRVLTWD-----------SD---TKPECRSYYINQGTPAQLGGMLVDMAAR 146 AL RA Q + V+ D SD E +Y + QLGG Sbjct: 118 ALLRATQANIPVVAVDVTAIGADATVTSDNVQAGREACTYLVE-----QLGG-------- 164 Query: 147 QVNKDKAKVAFF--YSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 KVA + ++D+ Q +EA HPG E+V TQ K++ A Sbjct: 165 -----SGKVAIVDGAAVSAISDRMQGCREAL----DAHPGIEVVATQRADLTRDKAMNVA 215 Query: 205 EGILKAYSDLDAIIA---PDANALPAAAQ 230 IL A D+D P A + AAQ Sbjct: 216 STILTANPDVDGFFGVNDPTAIGISLAAQ 244 >UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGQ4_PETMO Length = 342 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 12/198 (6%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY-DGPTEPSVSGQVQLINNFVNQGYNAI 88 I FI K F+ +GAQ+A GV+ + + +E VS QV ++ ++ +AI Sbjct: 46 IFFIVKASENEFWQIVLDGAQKAANHFGVEFIHQEATSESEVSRQVSILETAISTNPDAI 105 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE-------CRSYYINQGTPAQLGGMLV 141 +++ D L P ++RAM G+ V+ DS + +Y I Q + +L L Sbjct: 106 VLAPTVADALVPGIERAMDSGIPVIIIDSMANTDNYVSFLGSDNYTIGQRSADELAKAL- 164 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 + KVA V + +I + +P E+V+ + ++ Sbjct: 165 ---EEKNGSPSGKVAAITYMSGVGSLEARISGFLDRIEEAYPDIEVVSVRDAMGQVGNTI 221 Query: 202 QTAEGILKAYSDLDAIIA 219 +L AY DLD + A Sbjct: 222 NITLDLLTAYPDLDGLYA 239 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 65/295 (22%) Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + D T+P + Q I +++G NAII+S V + + P+L+ + V+++ D+ Sbjct: 94 IVKDPKTDPDM--QASQIQEMIDEGINAIILSPVDWEKITPSLEALKEADVKIVNVDTQV 151 Query: 120 KP-ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 K + YI G+ G+L + D KVA PT N+ + + + Sbjct: 152 KEMDYVDAYI--GSDNYNAGVLCGEDLIKRCPDGGKVAIL-ECPTQNSVNERITGFEETL 208 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND 238 AK G+EIV + + KSL+ A+ IL SD+ AI+ ND Sbjct: 209 AKAENGFEIVAREDTSGEFQKSLEAAQKILSENSDIVAIMCG----------------ND 252 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL--LKKGSMKTGDKLDI 296 ++A VG T +V +QG+I +Y D +KK KT +++ Sbjct: 253 QMA-VGAKTA-----------------MNVAEQGQILIYGVDGSPDIKKELKKTENQI-- 292 Query: 297 KGVGQVEVSP------------NSVQGYDYEADGNGIVLLPERV-IFNKENIGKY 338 G V SP N + G DYE + + E V + N+EN+ Y Sbjct: 293 --AGTVAQSPISMGKDAANTVLNILNGKDYEKE------IKENVFMINQENVDMY 339 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 14/220 (6%) Query: 48 GAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GA++A E V++T++GP TE V Q++++ +++ +AI +A+ P L++A Sbjct: 66 GAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAIGFAALDSQASVPLLQKAK 125 Query: 107 QRGVRVLTWDS--DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 G+ V+ +DS D+ + N + D A + + + +V Sbjct: 126 AAGIPVIAFDSGVDSDIPITTASTNN---VAAAALAADKMAELIGGEGEIGVIVHDQTSV 182 Query: 165 TD---QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 T ++ +V +I +++P +IV Q+G D KS A+ +++A+ ++ + Sbjct: 183 TGVDRRDGFVN----RIKEKYPNIKIVDIQYGGGDHLKSTDLAKAMIQAHPNIKGFFGSN 238 Query: 222 ANALPAAAQAAENLKND-KVAIVGFSTPNVMRPYVERGTV 260 + A LK + ++ ++GF + ++ G + Sbjct: 239 EGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVM 278 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 12/179 (6%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-ECRSYYI 128 VS Q+ IN+ + QG A+ ++ V +G+ P L+ + + ++ +D++ K + Y+ Sbjct: 82 VSKQIDQINDMITQGVEAVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNYVTAYV 141 Query: 129 NQGTPAQLGGMLV--DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 G+ + G + D+ R N K + + PT+ N + K+ I E + Sbjct: 142 --GSDNKNAGKVCGDDLVKRYPNGGKIAI---LNCPTMNSINDRIAGFKSAI--EGKNFT 194 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAII-APDANALPAAAQAAENLKNDKVAIVG 244 IV Q G D S++ A+ IL+++SD+ AI+ D AL A A A ++ K K+ I G Sbjct: 195 IVAEQDGKGDLQTSMKLADDILQSHSDIVAIMGGNDPTALGALA-ACKSAKQSKILIYG 252 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 18/199 (9%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELG--VDVTYDGPTEP-SVSGQVQLINNFVNQGY 85 +IAFI K + FF + A++ G++ + V P P ++ Q+QL+ + Sbjct: 55 KIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLVEQCITNKM 114 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVD 142 +AI+++ +G+ PA+K+A G+ V+T ++ Y+ N L L + Sbjct: 115 DAIVIAPCDSEGIVPAIKKANDAGILVVTANTKANGGDIVSYVGAQNFDVGYSLATALFE 174 Query: 143 MAARQVNKDKAKVAFFY---SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 Q KV + T ++ + KEA KE+PG E++ +Q D Sbjct: 175 KLGGQ-----GKVILIEGKAGNSTSEERAEGFKEA----LKEYPGIELLASQPADWDRAS 225 Query: 200 SLQTAEGILKAYSDLDAII 218 ++ E L+ Y +D ++ Sbjct: 226 AMTVMENCLQTYDQIDGVL 244 >UniRef50_UPI0001973330 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973330 Length = 325 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 119/285 (41%), Gaps = 8/285 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQV 74 G AA Q ++A I K FF S GA A E V + +GP +E + Q Sbjct: 24 GTAAHMSRRQERYQVAMIVKSTESAFFQSVFAGAGAAATEYNVSLITEGPESEEDYATQN 83 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++I V G +A+++SAV + A+ A +G+ V+ DSD + I GT Sbjct: 84 EMIYKAVENGADALVISAVDFNKNAEAVDWAAAKGIPVVVIDSDVNSSAVKFRI--GTDN 141 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF-G 193 + G + AA + + + Q + + + K+ EIVT Sbjct: 142 EEAGRMAARAALDGTDGELFIGIVNFDENTANGQQREQGFREEAKKDSRVKEIVTINVPS 201 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMR 252 D T++ +G+L + +++ I + A +L K D +++V F + V Sbjct: 202 AIDDTRA--ATKGLLSTHPEINVITTFNEWTSLGVGWAIRDLNKKDDISVVAFDSNAVSV 259 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 +E G V + + G + V A +L + ++ GDKLD + Sbjct: 260 GMLETGEVDALIVQNPYAMGYLGVEKAWEILSRRGVE-GDKLDTE 303 >UniRef50_A1WIH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WIH3_VEREI Length = 347 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 118/297 (39%), Gaps = 31/297 (10%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF +A K+ GV + G +E S+ QV I NFVNQG + I+V + + Sbjct: 45 FFVRMRQAGDEAAKDYGVKTIWQG-SEGSLEKQVSNIENFVNQGVDIILVDPLDRAAIAS 103 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD---KAKVAF 157 A+++A RG+ V+ + + P + M AR + K K +VA Sbjct: 104 AVQKAKARGIPVIAMGNKVDGHWNYNTLYPDYPN------MSMVARALGKQLDGKGEVAL 157 Query: 158 FYSSP--TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLD 215 V+D + + + + KE PG +V + D+++S + L Y L Sbjct: 158 LIGGKGNHVSDTRE--QAFRDVMKKEFPGIRLVGVEPTNWDSSRSANAMQTWLSTYPQLR 215 Query: 216 AIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV--------KEFGLWD 267 + A+++ AA+A + K+ + M P V G+ G W+ Sbjct: 216 G-VGCFADSICIAAKAIADASGRKLVFASYEGDPEMFPSVADGSTVIDVLNGAYRVGYWN 274 Query: 268 VVQQGKI---SVYVADALLKK---GSMKTGDKLDIKGVGQVEVSPN--SVQGYDYEA 316 + +I + Y D + S KT L KG+ ++P V+ +Y A Sbjct: 275 IAAAARIVRGAKYGVDLFMPTYFVMSDKTAGALKAKGLELPFITPERAKVEALNYRA 331 >UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK42_CLOPH Length = 320 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 16/163 (9%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAER------IAFIPKLVGVGFFTSGGNGAQQAGKEL 56 ++ FKKI + LG+ I++ V + + +A I K F+ S GA A E Sbjct: 1 MNTFKKIVVWILLGVMLITL-VSCSNKDNKKHYVAMITKSTKSAFWQSVFAGASAAATEY 59 Query: 57 GVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 + ++Y GP E Q LI + G A+I SAV + A++ A ++G++V+ Sbjct: 60 NLSISYAGPELEEDYEYQNDLIYQAIEDGAEAVIFSAVDYNANAKAIEDAAKKGLKVIII 119 Query: 116 DSDTKPE---CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKV 155 DSD CR GT G + AA +++K + Sbjct: 120 DSDVNSNQVTCRI-----GTDNYAAGCMAGEAALASSEEKIHI 157 >UniRef50_B6A0F4 Periplasmic binding protein/LacI transcriptional regulator n=13 Tax=Proteobacteria RepID=B6A0F4_RHILW Length = 317 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 6 FKKIAL-LSALGIAAI-SMNVQAAERIAFIPKLVGVG---FFTSGGNGAQQAGKELGVDV 60 KK+A + A+GIAA S+ V+A E+ + I G F++ NG QA K+ V V Sbjct: 5 LKKLAYGVVAVGIAASWSVGVKAQEQPSIIAVTHGQASDPFWSIVKNGMMQAAKDSNVKV 64 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 Y P + QLI VNQ I++S PD L PA+++A+ G+ V++ +S Sbjct: 65 DYRAPETFDMVAMAQLIEAAVNQNPAGIVISNPDPDALGPAIEKAVAAGIPVISMNS 121 >UniRef50_B9Z651 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z651_9NEIS Length = 309 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 18/272 (6%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 +++ L LG A S+ QA E I + G F+ + G GA QAGKELG+D+ + GP Sbjct: 2 LRRVILAVLLGSAVPSVPAQARECIEVVSAGGGYAFWQAVGEGANQAGKELGIDIYFRGP 61 Query: 66 T-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 E Q + N + A++++ +P+ ++R +G+ + D DT Sbjct: 62 AKEEDRDAQETIANMMWDLHCQALVMAPNAPE-RARLVERLKAQGIPTVYIDRDTGGADV 120 Query: 125 SYYI--NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI-AKE 181 + + N QL G + AR + K K + V+ +++ A+ I A Sbjct: 121 AAVVATNNLRAGQLAG---EEMARALGKRKRVAVLRERADVVSTEDR----ARGFIEAAT 173 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYS-DLDAIIAP-DANALPAAAQAAENLKNDK 239 G ++V + + S AE +L A +D + P ++ L A Q + K Sbjct: 174 RAGLKVVRSAYIGTSVGDSRVEAEKVLAALRGKIDGVFTPNESTTLGAVIQLKKMGLAGK 233 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQ 271 V +GF + + V G + +GL VVQ+ Sbjct: 234 VLHIGFDSNQYLASAVRLGDL--YGL--VVQR 261 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 20/287 (6%) Query: 6 FKKIALL--SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD-VTY 62 KK+A L +AL + +S+ QA + +A + + FF + +GA+ KELG + + Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVL 60 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TKP 121 D +P S ++ + + +G AI+++ D + A++ A + + VLT D ++ Sbjct: 61 DSQNDP--SKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 118 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + S+ + +GG + + +KAKV + + + + Sbjct: 119 DVVSHIASDNV---VGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVKGS 175 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 H E++ +Q D TK L E +L A D+ A+ A + + + A A +V Sbjct: 176 H--MELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQN-DEMALGALRAIQASGKEVM 232 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQ----GKISVYVADALLK 284 IVGF + V RG + + QQ G + + AD +LK Sbjct: 233 IVGFDGTDDGIAAVNRGKLA----ATIAQQPDLIGALGIETADKVLK 275 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 10/229 (4%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTY--DGPTEPSVS-GQVQ 75 + V+ ++ I K F+ + NG +Q+ K L GVDV+ DG T+ S GQ Sbjct: 67 VKVKGGLKMGAIAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQT 126 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + +N VNQGYNA+++S +S L ++ A +G ++ T + + + Y Q Sbjct: 127 MTDNLVNQGYNALMLSPISDSNLTASVDNA--KGKKIPTINVNDGLIASADYFVGPDAYQ 184 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + + ++Q+ DK VA + K I + G +V Q Sbjct: 185 NGELAAEWVSKQLG-DKGDVAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQNADW 243 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 D K+ + A ++ DL AI + + +A E K D + +VG Sbjct: 244 DRQKAKELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKKD-ILVVG 291 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 17/267 (6%) Query: 6 FKKIALLSALGIAAISM-NVQAAER-IAFIPKLVGVGFFTSGGNGAQQA-GKELGVDVTY 62 +++ + + AA+++ AA+R IA I K ++ + GA A K +T+ Sbjct: 23 MRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVRKGAADAVAKVENYTMTF 82 Query: 63 DGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 GPT E +V+ QV ++ + V Q AI+++ PD L P++++A + + V+ DS Sbjct: 83 QGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLIDSMISD 142 Query: 122 ECRSYYI------NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 YY N+ LG +VD + KVA P V + V + Sbjct: 143 SGAKYYQSFLATDNEAAGEALGKEMVDHVGQ-----TGKVAIMSYVPGVGSEIGRVGGFR 197 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 IA EH +IV + + ++ +L + DL I A + +A + Sbjct: 198 KYIA-EHSHIQIVGPFYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGVGRAIQQA 256 Query: 236 -KNDKVAIVGFSTPNVMRPYVERGTVK 261 K+ K+ + F + +V GT + Sbjct: 257 GKSGKLYAIAFDGNEDEQGFVRSGTFQ 283 >UniRef50_A6TS00 Periplasmic sugar-binding protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TS00_ALKMQ Length = 337 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 7/217 (3%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA+QA ++ V V ++ P S +++ ++ + + II S + + +A Sbjct: 69 GAEQAARDHNVVVEFNAPRFYSPEEELKYLDIAILSEVDGIITHVSSGEDFTTMINKAYY 128 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS---PTV 164 G+ V+T ++D K R+ ++ GT L G + KA +A S+ P Sbjct: 129 GGIPVVTVENDDKISNRAAFV--GTNGFLLGTEAGKLMVEATGGKANIAIIVSNNFEPDA 186 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDAN 223 QN + +++ KE+P E+V T + + + IL D+DAI + Sbjct: 187 ASQNIRINGFLSEL-KEYPDMEVVQTYTSRMGILSAEEITQSILNGGKDIDAIFTMTSVD 245 Query: 224 ALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 L + + K ++ ++GF Y+E+G + Sbjct: 246 TLGSVQLIIDQNKVGEITMIGFGDAESTLRYIEKGII 282 >UniRef50_C5CYD2 Sugar ABC transporter n=17 Tax=Proteobacteria RepID=C5CYD2_VARPS Length = 346 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 4/192 (2%) Query: 50 QQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRG 109 +Q G+ LGV Y G E V+ Q+ + + I++ ++PD + RA+ G Sbjct: 62 KQLGRTLGVRTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAVAMG 121 Query: 110 VRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQ 169 + V+T+ +D+ R+ ++ + G A K + A +P + ++ Sbjct: 122 IPVVTFAADSPNSKRASFVTSDNDRE--GTQAADAIAAALGGKGEYAVL-ENPGQDNHDR 178 Query: 170 WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAA 229 + ++ +H G ++V D +K+ Q + +A +L A+ P+AN+ AA Sbjct: 179 RIAAFVNRMKTKHAGMKLVGRAASNQDPSKAYQAVLSLAQANPNLGALFMPEANSALGAA 238 Query: 230 QAA-ENLKNDKV 240 QA E+ KN +V Sbjct: 239 QAKIESKKNIRV 250 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 4/116 (3%) Query: 3 LHRFKKI-ALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV- 60 + RFK + + L+ LG+ S++V +AE A I K + F+ + G + K LGVDV Sbjct: 1 MKRFKTLKSCLAILGLVC-SVSVYSAE-YAVILKTLSNPFWVAMKEGIENEAKALGVDVD 58 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 + P+E Q+QL + +N+ Y I + +SP L +A ++G+ ++ D Sbjct: 59 IFASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLD 114 >UniRef50_Q1IUK1 Transcriptional regulator, LacI family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUK1_ACIBL Length = 368 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/212 (22%), Positives = 80/212 (37%), Gaps = 3/212 (1%) Query: 72 GQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQG 131 G + + + G + +I++A +PDGL P + A R + V+ +D RS + Sbjct: 111 GDTEALRELIEDGVDGVILTAGNPDGLTPLVNEAEGRNIPVVCVSTDAPESLRSSIVC-- 168 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 +L G L + +KVA T D + K G +IV Sbjct: 169 VEPRLNGQLAGELMGKFVPAGSKVAVVAGMLTAMDHLSKTEGFSVTFPKHCHGGQIVGVI 228 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVM 251 G+ D +S Q +L DL + N LP +V ++ M Sbjct: 229 EGHEDEDESFQKTFDLLGRVPDLAGLYVNTVNCLPVCRALGARQLAGRVKLITTDLFAEM 288 Query: 252 RPYVERGTVKEFGLWDVVQQGKISV-YVADAL 282 Y +GT+ +QG+++V +AD L Sbjct: 289 ATYFAKGTITASIYQQPHRQGQLAVRLLADNL 320 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 14/224 (6%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 +F S N + KE +T S + Q+ + NF++Q +AI+++ V D + P Sbjct: 62 YFVSMNNAIKSMAKEKNTKLTVSDAQNDSAT-QLNNVQNFISQNVDAILINPVDSDAIVP 120 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 A+K A + V+ D + + A G + A ++ KV Sbjct: 121 AIKAANNAHIPVIAMDRGSNGGTVLTTVASDNVA--AGKMAAQAVEKLVGKNVKVLELSG 178 Query: 161 SP----TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDA 216 +P T+ + EAK G I+++Q D T L T + +L+++ D+ A Sbjct: 179 TPGASATIDRGKGFNSEAKT------LGLNILSSQSANFDRTTGLNTTQNMLQSHKDVQA 232 Query: 217 IIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 I A + AA+A + K+AI G + ++ GT+ Sbjct: 233 IFAQNDEMALGAAKAVQ-ATGQKIAIFGIDGESETHDAIKAGTM 275 >UniRef50_C5V4K8 Periplasmic binding protein/LacI transcriptional regulator (Fragment) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4K8_9PROT Length = 381 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 43/321 (13%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNA 87 RIAF+ V ++ G K LGV + + + GQ++ ++ + + Y+A Sbjct: 77 RIAFLFPHVKDPYWVDCTYGLISEAKRLGVAIDIFPADGYDDLIGQLRKMDEVIAEKYDA 136 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA-- 145 I++S +S P++ +A RG+ V +D+ + + I + L GM VD Sbjct: 137 IVISPISQTANNPSIAKARSRGIPVFQLANDSTSDDLTIKIT----SSLKGMGVDTMGWV 192 Query: 146 -RQVNKDKAKVAFFYSSPTVTDQNQWVKE---AKAKIAKEHPGWEIVTTQFGYNDATKSL 201 R + K P D + E A+A K I ++G +D Sbjct: 193 IRDAQRRGLKAINVALLPGPADAGWVMGEVAGARAAAKKSPIKVNIADIRYGDSDLVGQS 252 Query: 202 QTAEGILKAY-SDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 Q AE +L A+ S LD I+ A A A + +K+ IV F M ++ RG Sbjct: 253 QLAEQLLAAHGSKLDYILGCTACAPAAILPVHDAGLKEKIRIVAFGLTREMIGHIRRG-- 310 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY-DYEADGN 319 +Y A D+KGV Q V+ N+ Y + + Sbjct: 311 --------------EIYAA--------------TDVKGVSQARVAINATVNYLEGRIESR 342 Query: 320 GIVLLPERVIFNKENIGKYDF 340 +L + + +++N +Y++ Sbjct: 343 PHTMLIKLGMVDRDNYAQYNY 363 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 34/295 (11%) Query: 5 RFKKIALL--SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD-VT 61 R KK+ L +AL ++S QA + +A + + FF + +GA+ KELG + + Sbjct: 2 RMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIV 61 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TK 120 D +P S ++ + + +G AI+++ D + A++ A + + VLT D ++ Sbjct: 62 LDSQNDP--SKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASR 119 Query: 121 PECRSYYINQGTP-AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQ------WVKE 173 E S+ + ++ G ++ ++ D + + T + + VK Sbjct: 120 GEVVSHIASDNVVGGEMAGHFIEA---KIGSDAKVIQLEGIAGTSAARERGEGFMNAVKG 176 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 +K ++ P F D TK L E +L A D+ A+ A + + + A A Sbjct: 177 SKMQLLASQPA------DF---DRTKGLNVMENLLAANPDVQAVFAQN-DEMALGALRAI 226 Query: 234 NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQ----GKISVYVADALLK 284 V IVGF + VERG + V QQ G I + AD +LK Sbjct: 227 QASGKSVMIVGFDGTDDGIAAVERGQLA----ATVAQQPDMIGAIGIETADKMLK 277 >UniRef50_C0CKI5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKI5_9FIRM Length = 366 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 11/170 (6%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA A ++LG+++ + + + Q+ +I FV QG +AI + +V DG+ + A + Sbjct: 69 GADTAAEDLGMNLIWK-ACDGDLDKQIDIIRGFVQQGVDAIWIDSVDVDGIVSVVNEATE 127 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK-AKVAFFYSSP--TV 164 GV VLT + ++ E Y N P + A + KD+ V S V Sbjct: 128 AGVTVLT--AGSRVEGEDNY-NLVYPDLVDAQFAAKAIGEYYKDETGTVGLIVGSAGNLV 184 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 +++ Q E K + + ++VT Q G DAT S+Q AE +++A DL Sbjct: 185 SEKRQ---EGFEKGIEGYSNLKLVTEQ-GMWDATTSMQKAEDMIRANDDL 230 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 19/267 (7%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD---VTYDGPTEPSVSGQVQLINNFVN 82 +A+ IA I FF + GA+ KELG + +T+D + Q ++I+ + Sbjct: 26 SADLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHD----DDANKQSEMIDTAIG 81 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD---TKPECRSYYINQGTPAQLGGM 139 +G AII+ D A+K+A G+ D + T N AQLG Sbjct: 82 RGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREINATGVAVAQIVSNNYQGAQLGAQ 141 Query: 140 -LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK-EAKAKIAKEHPGWEIVTTQFGYNDA 197 V + + N + +D N ++ + + ++P + V Q Sbjct: 142 EFVKLMGEKGN-------YVELVGKESDTNAGIRSQGYHDVIDDYPDLKSVAKQSANWSQ 194 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 T++ E IL+A D+ +I+ + A A + V +VGF N +R ++ Sbjct: 195 TEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRKDVIVVGFDGSNDVRDSIKS 254 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLK 284 G +K L Q +++V ADA +K Sbjct: 255 GGIKATVLQPAYAQAQLAVEQADAYIK 281 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 25/279 (8%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQA-AE----RIAFIPKLVGVGFFTSGGNGAQQAGKE 55 M RF + A AL A+ +A AE RIA IP L F+ + GA+ A Sbjct: 1 MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 +G + + G + + QV +++ + + +AI+++ L LK+A G+ ++T Sbjct: 61 IGAQIIFQGAPDFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMITV 120 Query: 116 DSDTKPECRSYYINQG----------TPAQLGGMLVDMAARQVN---KDKAKVAFFYSSP 162 DT Y G + LGG ++AAR + DK KV P Sbjct: 121 --DTFIGTGDYQTGAGDGDFPLSYIASDNVLGG---EIAARSLALAIGDKGKVYVSNVKP 175 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 V+ +Q + K+++AK HPG ++ TQF NDA K+ + + DL + + Sbjct: 176 GVSTTDQREQGFKSEMAK-HPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANL 234 Query: 223 -NALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + L +A + ++ + +V F P + ++ G + Sbjct: 235 FSGLGSANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLI 273 >UniRef50_C7PZQ0 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZQ0_CATAD Length = 382 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 29/265 (10%) Query: 37 VGVGFFTSGGNGAQQAGKELGVD---VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAV 93 V ++ +G G Q+ +LG+ TY P ++ Q + +QG +SA+ Sbjct: 88 VAADYWKAGQVGFQKGCSDLGLSGSHCTYFAPPNGKLTEQNSEMETLRSQGITGYAISAI 147 Query: 94 SPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA 153 P + +Q GV VL DS P + + GTP G A +QV K Sbjct: 148 DPTSAAGTIHTDVQHGVSVLAIDSPL-PGTDAASLYLGTPNYTAGQQAGEAMKQVLGGKG 206 Query: 154 KVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD 213 KVA S T + Q ++ + + G I Q ND +L A A SD Sbjct: 207 KVAVLVGSLTAANATQRIQGFEDAL----KGSNITVVQK-VND---NLSAA----TATSD 254 Query: 214 LDAIIA--PDANAL--------PAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKE 262 + I+A PD N L PA AQA ++ K + V IV + +++ G + Sbjct: 255 AETILANNPDVNGLYGVYSYDGPALAQAVQSAGKTNSVHIVSDDSDAQTLGFIKSGVISG 314 Query: 263 FGLWDVVQQGKISVYV--ADALLKK 285 + QQG Y+ AD +L K Sbjct: 315 TVVQMPYQQGYTGAYILAADKVLGK 339 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 129/289 (44%), Gaps = 25/289 (8%) Query: 39 VGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGL 98 VG+F + G +A E V++TY + S Q+ + + +++ + I ++AV + Sbjct: 50 VGYFVAVREGIDKAAAENNVEITYSDAGWDA-SKQLSQVEDLISKKVDLIAIAAVDSNAA 108 Query: 99 CPALKRAMQRGVRVLTWDS------DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK 152 A++ A + + +L + + + + E Y+ Q + G + ++A + + Sbjct: 109 KTAVRMANEANIPILAFTNAIGDKENGEYEGLITYVGQ-NEVETGKLTGELAKSLLGEKG 167 Query: 153 AKVAFFYSSPTVTDQ---NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 KV P + Q + V EA + +E+V TQ + ++L+ E +++ Sbjct: 168 GKVVLIEGRPGTSPQINRRKGVMEA----LDTNKNFEVVYTQTSNWEKEQALKIVEDLIQ 223 Query: 210 AYSDLDAIIAPDANALPAAAQAAE--NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 +D IIA D N+ A A + NLK DK+ ++G V+ G + Sbjct: 224 KNQTIDVIIAQDDNSAIGAGMALKEANLK-DKILVIGLGGSTEGLNAVKSGLIDGTTYMS 282 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLD-IKGVGQVEVSPNSVQGYDYE 315 V++G ++ A L G+K++ + + QVEV+ ++V+ + E Sbjct: 283 AVEEGYTAITAAVKYL------NGEKVEPVTQMKQVEVNKSNVESFKGE 325 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/150 (21%), Positives = 74/150 (49%), Gaps = 7/150 (4%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTKPECRSYY 127 ++ Q+ + + + + + I+++A SP L PA++ A + G++V+++D+ DT + + Sbjct: 95 INKQISDMQDLITKKVDGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQVATVG 154 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 I+Q + G + D ++++ V + T D +W ++ K++P EI Sbjct: 155 IDQ---TEFGRVCADWLVKKLDGKGKIVVLNGIAGTANDTMRW--NGAEEVFKQYPDIEI 209 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAI 217 + + D + E +L AY ++D + Sbjct: 210 LGSANASWDYAQGKAAMESMLSAYPEIDGV 239 >UniRef50_A1SDR2 Putative sugar ABC transporter, substrate-binding protein n=2 Tax=Actinomycetales RepID=A1SDR2_NOCSJ Length = 368 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPTEPSVSGQVQLINNFVNQ 83 QA R+A + +F NG +Q LG+D++ YD + + Q ++ ++ Sbjct: 54 QAGVRVAIVQNSGQGDYFQQYLNGTKQQAAALGIDLSVYDAQGDNAT--QATQLDQAISS 111 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 G IIV PD LCP + +A+ +G++V+ +D + + Q + ++ +++D Sbjct: 112 GVQGIIVRHGFPDTLCPGVNKAIDQGIKVVIYDVEIQKCAPQAVQTQQSDNKMASLVLDK 171 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 A + K + D+ V + +A + T +F + AT + Sbjct: 172 MAEDIGTGKPVGYVNVAGIAPLDRRDLVWQ--DYLATNDWTQKFKTGKFTNSTATDTAPM 229 Query: 204 AEGILKAYSDLDAIIAP 220 + +LK+ D+ A+ AP Sbjct: 230 VDSVLKSNPDVVAVYAP 246 >UniRef50_A5CP31 Putative sugar ABC transporter, solute-binding protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CP31_CLAM3 Length = 325 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 2/71 (2%) Query: 47 NGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 +GA+ AG + G VTY+ ++P + Q QLI+N V Q + I+VS +PDG+ ++++A+ Sbjct: 62 SGAETAGGQYGATVTYN--SDPDPAKQSQLIDNAVAQEVDGIVVSMANPDGVKDSVEKAV 119 Query: 107 QRGVRVLTWDS 117 G+ V+T +S Sbjct: 120 AAGIPVVTINS 130 >UniRef50_Q2K9A4 Ribose ABC transporter, substrate-binding protein n=9 Tax=Proteobacteria RepID=Q2K9A4_RHIEC Length = 379 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%) Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTK 120 T V Q+ INNF++ GY+AI+V+A +P P +KRA Q GV ++ +D+ DTK Sbjct: 105 TGEDVPAQISAINNFIDAGYDAIVVNAQNPTAFGPVIKRAKQAGVILVAFDNILDTK 161 >UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Tax=Proteobacteria RepID=B5XQK7_KLEP3 Length = 317 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 12/242 (4%) Query: 1 MTLHRFKKIALLSALGIAAISMN-VQAAERIAFIPKLVGVG----FFTSGGNGAQQAGKE 55 M L K+ LL+ SM+ + AA LV + FF GAQ A K Sbjct: 1 MMLFHTGKLRLLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKA 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 G D+ + V+ Q I N++ QG I+V+A+ +G+ PA+K A + V+ Sbjct: 61 SGKDLVIFNSNDNPVA-QNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAI 119 Query: 116 DS--DTKPECRSYYINQGTPAQ-LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK 172 D+ P+ ++ + +G VD +++ +A++ + + QNQ K Sbjct: 120 DAVLPAGPQAAQVGVDNIEGGRIIGQYFVDYVQKEMG-GQARLGIVGALNSAI-QNQRQK 177 Query: 173 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 + + K +P I G N K++ AE ++ DL AI A AL A A Sbjct: 178 GFEETL-KSNPKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAV 236 Query: 233 EN 234 EN Sbjct: 237 EN 238 >UniRef50_P77269 ABC transporter periplasmic-binding protein yphF n=58 Tax=Bacteria RepID=YPHF_ECOLI Length = 327 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 16/216 (7%) Query: 40 GFFTSGGNGAQQAGKELGVDVTY-DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGL 98 G++ G Q A K+ V V + + +S + ++ V + +AII+SAVS +G Sbjct: 42 GYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGS 101 Query: 99 CPALKRAMQRGVRVLTWDSDTKPECRSYYINQ---GTPAQLGGMLVDMAARQ--VNK-DK 152 ++RA + G+ V+ +++ + Y++ G P + G L + AA NK D+ Sbjct: 102 SRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQ 161 Query: 153 AKVAFFYSSP---TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 K+A V + + + K+++ PG +IV Q G K++ E ++ Sbjct: 162 PKIAVINCEAFEVCVQRRKGFEEVLKSRV----PGAQIVANQEG-TVLDKAISVGEKLII 216 Query: 210 AYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVG 244 + DL+AI+ A A +A N K+A+ G Sbjct: 217 STPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFG 252 >UniRef50_Q9R6G3 Tiorf96 protein n=1 Tax=Agrobacterium tumefaciens RepID=Q9R6G3_RHIRD Length = 337 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 49/95 (51%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 ++ R A++ A+ +AA + + +I I GFF GA+ A K+LGVD T Sbjct: 18 SITRVVSAAIIGAVILAAPAFAQEKRLKIVHIGVAAPTGFFAYLNKGAEDAAKDLGVDFT 77 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPD 96 Y P+ P++ QV+ I + G + II++ + D Sbjct: 78 YIFPSTPTLPAQVETITAAIAGGADGIIINGIGDD 112 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 47 NGAQQAGKELGVDVTYDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRA 105 +GAQ+A +G ++ + GP + + + GQV L+ N +N +AI+++ + D L +++A Sbjct: 70 DGAQEAVDAIGGELVFTGPADNNDIQGQVSLMENLINSKVDAILLTPLDSDALAAPVEKA 129 Query: 106 MQRGVRVLTWDSDTKPECRSYYI 128 M G+ V+ DS + + +I Sbjct: 130 MDAGIPVIVIDSAVNTDKYTSFI 152 >UniRef50_C7LYX4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYX4_ACIFD Length = 349 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 8/156 (5%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 FF S GA K LGV + + G P + S + Q+ ++ + NAI+V+ P L Sbjct: 62 FFQSMYVGAAAEAKALGVKLVWQGDPVDYSPATQIPILQQVLALHPNAIVVAPTDPKALN 121 Query: 100 PALKRAMQRGVRVLTWDSDTKPECR-------SYYINQGTPAQLGGMLVDMAARQVNKDK 152 ++ A++ G++VL DS + + Y T AQ +D A + Sbjct: 122 TYMQEAVKEGIKVLNVDSGSSDQSMITSWVTGDNYQGGETAAQALASAMDYAKNCTASNP 181 Query: 153 AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 VA SS T T Q V KA+I +P +++ Sbjct: 182 CTVAVGVSSLTTTTDAQRVAGFKAEIKAHYPNIQVL 217 >UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TUU8_ACIAC Length = 318 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 15/272 (5%) Query: 1 MTLHR--FKKIALLS-ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 MTL+R + A+L+ A G+ A Q ++A + K + FF + +GA+ K Sbjct: 1 MTLNRRTLQTAAVLALAGGLFAQPAFAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHA 60 Query: 58 VDVTYDG---PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 + T E + Q+++I V Q NAI+++ L PA+K A+ +G+ V+ Sbjct: 61 SEYTLVANGIKNETDTAAQIKMIEQAVAQKVNAIVLAPADSKALVPAVKAAVDKGILVVN 120 Query: 115 WDSDTKPEC-RSYYIN---QGTPAQLGGMLV-DMAARQVNKDKAKVAFFYSSPTVTDQNQ 169 D+ + +N G + G LV D A+Q+ K KV T + Q Sbjct: 121 IDNRLDANALKEKSLNVPFVGPDNRAGAKLVGDYLAKQL-KAGDKVGIIEGVSTTFNAQQ 179 Query: 170 WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDANALPAA 228 + + A + +V Q G + K A G+L+ + DL A++A D+ AL A Sbjct: 180 --RTLGFQDAMKAANINVVGVQSGQWEIEKGNTVAAGMLREHPDLVALLAGNDSMALGAV 237 Query: 229 AQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 A K KV +VG+ N ++P + G V Sbjct: 238 AAVRAAGKAGKVQVVGYDNINAIKPMLADGRV 269 >UniRef50_C0C5Y6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Y6_9CLOT Length = 329 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 +I FIP + GFF G ++ KE G V VT + + ++ INNF N GYN Sbjct: 47 KIGFIPSDL-AGFFAQLKTGLEKYAKEEGNVQVTTKECIDSA--KKIDAINNFANGGYNV 103 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 II + L PA+++A +GV +D+D + Sbjct: 104 IICHVDNAVALKPAMEQAQSKGVYFFAYDTDIE 136 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 31/259 (11%) Query: 41 FFTSGGNGAQQAGKELGVD-VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F + + + KE+GV+ +T D E S QV+ + +F+ QG +AII++ + Sbjct: 45 FIVNVSDAMEAKAKEMGVELITVD--AERSALKQVEQVESFIGQGVDAIIMNPAEVEASS 102 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA----------QLGGMLVDMAARQVN 149 PA+K AM + ++ +S+T + ++ + T + +LGG Sbjct: 103 PAIKLAMDAKIPIINVNSETSAKPTAFVGSDDTESARIAMKYIAEKLGG----------- 151 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 K + + Q + AK I K +PG +++ Q G D K + E ++ Sbjct: 152 --KGNILMMHGFMGQAAQIKRDNGAK-DILKANPGLKLLAEQSGEWDRAKGMSLTENWIQ 208 Query: 210 AYSD-LDAIIAPDANALPAAAQAAE--NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 +Y D ++AI A + A +A E LK + + + P+ ++ V++GT+ Sbjct: 209 SYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQA-VKKGTLDATVFQ 267 Query: 267 DVVQQGKISVYVADALLKK 285 + +QG ++ A KK Sbjct: 268 NAKEQGGKAIETAVKAAKK 286 >UniRef50_B5I626 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I626_9ACTO Length = 380 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 27/256 (10%) Query: 37 VGVGFFTSGGNGAQQAGKELGV---DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAV 93 V ++ +G G + +LG+ TY P ++ Q + +QG +SA+ Sbjct: 86 VAADYWKAGQVGFLKGCSDLGIAKSKCTYFAPPNGKLTEQNSELETLRSQGVTGYSISAI 145 Query: 94 SPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA 153 P + +Q+G+ VL DS P + + GTP G A +QV K Sbjct: 146 DPTSAAGTIHTDVQKGIGVLAIDSPL-PGTDAASLYLGTPNYTAGFQAGTAMKQVLGGKG 204 Query: 154 KVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD 213 KVA S T ++ Q + +A + G +I Q ND +LQ + A SD Sbjct: 205 KVAILVGSLTASNATQRIAGFEAAL----KGTKITVAQ-KVND---NLQAST----ATSD 252 Query: 214 LDAIIA--PDANAL--------PAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKE 262 + I+A PD N L PA AQA + K V IV + +++ G + Sbjct: 253 AETILANNPDVNGLYGVYSYDGPALAQAVTSAGKTASVHIVSDDSDAQTLKFIKSGVISG 312 Query: 263 FGLWDVVQQGKISVYV 278 + QQG Y+ Sbjct: 313 TVVQMPYQQGYTGAYI 328 >UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K692_BACHD Length = 332 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 3/200 (1%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA++A + V V Y P + Q++LI+ ++ + IIV AV+ + P + +A+ Sbjct: 66 GAREAENQFDVLVEYKAPKRSNPEEQLKLIDMAISAKVDGIIVQAVNEEMFTPLINKAVD 125 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 G+ V+T D+D R YI GT G + A + VA S + Q Sbjct: 126 AGIPVITIDTDAPRSNRVAYI--GTDNYYSGTIAGKAMLDDMEGDIHVAVITGSLESSHQ 183 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 V+ I+ E P +V + ++ A +++ + ++A A Sbjct: 184 KLRVQGFIDMISNE-PRVTLVEVEASNISRLEAELKAHQLMEEHPHINAFYGTSALDGIG 242 Query: 228 AAQAAENLKNDKVAIVGFST 247 AAE L D + ++ F T Sbjct: 243 IVAAAEKLGLDDLYVIAFDT 262 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 13/270 (4%) Query: 12 LSALGIAAISMNVQAAER-IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPS 69 L+A G S + E+ I I K++G +++ GA++AGK+LG V G E Sbjct: 17 LTACGSTNKSKDSSEGEKTIYVIVKVLGNQYWSVVQAGAEKAGKDLGCKVVIVGTAAESD 76 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI- 128 + GQV+ I + ++ +AI+V+ + L + + G ++ DS + E S + Sbjct: 77 IEGQVRYIQDAISAKADAIVVAPLDRTALKNPISEQFKSGTPIVLIDSSVEGEDYSTALM 136 Query: 129 -NQGTPAQLGG--MLVDMAARQVNKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + ++ M+ + A+ V +DK +A S N +K + P Sbjct: 137 TDNVEAGRMAAKEMIARLKAKGVAEDKEGTIAIQAGSTGSMAINDRLKGFNEYWGENAPA 196 Query: 185 -WEIVTTQFGYNDA--TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 W+++ ND +K++ + L Y++L + P+ + K + Sbjct: 197 SWKVLNDDIKINDGDISKAVAFCQDFLTTYTNLIGVFGPNNGSTVGFVTGLTEAKRTDLT 256 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQ 271 ++GF N + + G E+ + +VQ+ Sbjct: 257 MIGFDFSNEIEQMIRGG---EYDVASMVQR 283 >UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax=Thermotoga RepID=B9KBM0_THENN Length = 327 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 26/254 (10%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 F+ G + AG++ GV+ Y GP + S+ + L+N+ + + + +IV+ +P L Sbjct: 51 FWAVVMKGLKDAGEKYGVETVYLGPEKYSLKEFIDLVNSAIARKPDGLIVTITNPVALDE 110 Query: 101 ALKRAMQRGVRVLTWD-SDTKP--ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAF 157 L++A++ G+ V+ + DT+P E Y + G L G V A R + + K A Sbjct: 111 PLRKAIKMGIPVVAINVPDTRPPEEAIPYLVYVGMDEYLAG--VYAARRMLQEFTPKRAV 168 Query: 158 FYSSPTVTDQNQWVKEAKAK------IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 + + EA+AK K P ++ T D TK+L + L + Sbjct: 169 I----AIHEPGHAGLEARAKGIMDVLSEKNIPVEKLDIT----TDPTKALSIMKSYLMKH 220 Query: 212 SDLDAI--IAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 D DAI + P A PA E KV I + ++ GTV L+ + Sbjct: 221 PDTDAIFTLGP-LGAHPAIQLVEEEGLKGKVKIGAIDLTTKIIEAIKDGTV----LFTID 275 Query: 270 QQGKISVYVADALL 283 QQ + Y+ L Sbjct: 276 QQQYLQGYLPVVFL 289 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 110/238 (46%), Gaps = 7/238 (2%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +AFI + G F+ + G + +LGV V G + + Q ++++ V +AI Sbjct: 65 NVAFIQGVAGDEFYITMQCGIEAEAAKLGVTVNTQGGQKFDPTLQTPILDSVVASKPDAI 124 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ-GTPAQLGGMLVDMAARQ 147 +++ + L+ A G++V+ D+ T E S+ ++Q + + GG A + Sbjct: 125 LIAPTDVTAMQRPLENAAAAGIKVVLVDTTT--EDPSFAVSQVSSDNEGGGAAAFKAIKD 182 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 N + KV + P ++ + VK + + K+ ++ + Q+ +ND + Q Sbjct: 183 KNPNGGKVLVISTDPGISTVDARVKGFEDAVGKDST-FDYLGVQYSHNDPATAAQLVTAA 241 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFST-PNVMRPYVERGTVKEF 263 L+ D+ I A + + ++ + K+D++ IVGF PN ++ ++ GTV+ Sbjct: 242 LQKDPDIVGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPNQVK-ALKDGTVQAL 298 >UniRef50_C0C2G7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G7_9CLOT Length = 356 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 34/228 (14%) Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD-SD 118 + DG ++ ++ QV I F+ QG +AI+++AVS D + P+LK+AM+ G+ V + S Sbjct: 96 ILQDGASDSAL--QVNQIETFITQGVDAILINAVS-DAVEPSLKKAMEAGIPVFAVNRSI 152 Query: 119 TKPECRSYYINQG---TPAQLGGMLVDMAARQVNKDKAKVA-FFYSSPTVTDQNQWVKEA 174 T SY+I + Q+ L+DM + KD+ Y + Q +++ Sbjct: 153 TDENAYSYFIGANDTLSGEQMANCLLDM----IEKDQMDSCNILYIQGVIGATYQTLRQG 208 Query: 175 KAKIAKEHPGWE----IVTTQFGYNDATKSLQTAEGILKAY--SDLDAIIAPDANALPAA 228 + G++ I+ +D + + + +L Y ++DAI+ + A Sbjct: 209 GFDSIMDEKGYDMGVNILERIPCKHDKETVISSIQNMLNKYPAGEIDAIVCEGPDDAVGA 268 Query: 229 AQAAENLKNDKVA--IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKI 274 QA ++ ++ IVG P +WD ++ GKI Sbjct: 269 LQAVQSAGRTELVGKIVGMDMPT--------------EVWDAIKAGKI 302 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 13/257 (5%) Query: 10 ALLSALGIAAIS-MNVQAAER-IAFIPKLVGVGFFTSGGNGAQQAGKELGVD-VTYDGPT 66 ++L LG S + QA E+ I + + FF S GA++ KELG + + D Sbjct: 14 SILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLDSQN 73 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRS 125 +P + + I + + G + +IV+ D + +++ A + + V+T D E S Sbjct: 74 DP--AKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVS 131 Query: 126 YYINQGTPAQLGGMLVD--MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 + + GG L + NK KV P + + K I K+ Sbjct: 132 HIASDNIK---GGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKK-S 187 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIV 243 +++++Q D + L E I++A SD DA+ A + AA+A + N K+ +V Sbjct: 188 NLKLISSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKT-ANKKIIVV 246 Query: 244 GFSTPNVMRPYVERGTV 260 GF + +E+ + Sbjct: 247 GFDGDEDAKTAIEKSEI 263 >UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C383_9CLOT Length = 336 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 5/185 (2%) Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-ECRSYYINQGTPAQ 135 I + +G +A+ + V + + +LK GVR++ DS K E YI G+ Sbjct: 100 IQEMIAEGIDAVFLCPVDWEEITDSLKALKDAGVRIINVDSQVKEMEYVDAYI--GSDNH 157 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + + D K+A PT N + + IA G+E+V + Sbjct: 158 NAGFICGEDLIEKRPDGGKIAIL-ECPTQNSINDRITGFEEAIADAEKGFEVVAREDTGG 216 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFS-TPNVMRPY 254 + ++L+ AE ILK D+ AI+ + A A K + V I G +P++ + + Sbjct: 217 EFDRALEAAEKILKENPDITAIMCGNDQIAVGAMTAVNLAKMEDVIIYGVDGSPDIKKEF 276 Query: 255 VERGT 259 + G Sbjct: 277 KKAGC 281 >UniRef50_C2L0C0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=3 Tax=Clostridiales RepID=C2L0C0_9FIRM Length = 337 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 9/152 (5%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ-- 130 Q+ +++ N GY+A+ V V G+ L + + D+ E + Y+ Q Sbjct: 97 QLSQLSDCANSGYDAVFVIPVDSSGITAGLAEISDAKIPIYNVDTAVIEEDMNKYVTQFV 156 Query: 131 GTPAQLGGMLVDMAARQVNKDKAKVAF--FYSSPTVTDQ-NQWVKEAKAKIAKEHPGWEI 187 GT A + G LV + D AK+A F S+ + D+ N ++K + ++ + I Sbjct: 157 GTNAFMAGELVGKQLASKHPDGAKIAILDFPSNESCVDRVNGFMK----GLGEQKDKFTI 212 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIA 219 V Q G KSL AE IL A SDLDA Sbjct: 213 VAQQDGGAALDKSLGLAEDILTANSDLDAFFC 244 >UniRef50_C0XA52 Periplasmic sugar-binding protein n=3 Tax=Lactobacillus RepID=C0XA52_9LACO Length = 320 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 8/259 (3%) Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAV--SPDGLCPALKRAMQRGVRVLTWD 116 D+ Y E SV+ QV INNF+ I ++ V + L ALK+A + G++++ D Sbjct: 64 DILYSRNPELSVNNQVNEINNFIKNEVKVIFINPVDGTSTKLIRALKKAHEAGIKIIVVD 123 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 S E S Y++ + V A ++K K+ PT +K + Sbjct: 124 SQL--ENSSNYVDCTIRSNNYQAGVLCAKELMSKQKSANILILQQPTAISVVDRIKGFED 181 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDANALPAAAQAAENL 235 I K + + IV + S + LK + D I++ D A+ A A N Sbjct: 182 TI-KNNKNFHIVDKINTTGQSENSYPKVQKYLKQGKNFDTIMSLNDKTAVGALAAINANN 240 Query: 236 KNDKVAIVGFS-TPNVMRPY-VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 K+ K+AI + N+ + + VK +Q GK+++ VA L+ +K Sbjct: 241 KSSKIAIYSIDGSENIKKMLSTQNANVKATVAQSPLQIGKVAIKVAYELINHQKVKKEII 300 Query: 294 LDIKGVGQVEVSPNSVQGY 312 L +K + + ++ G+ Sbjct: 301 LPVKLITSKNIKNFNITGW 319 >UniRef50_UPI0001C31B7A ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31B7A Length = 390 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 88/228 (38%), Gaps = 14/228 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPTEPSVSGQVQLINNFVNQGYNA 87 RI F L F ++ G ++ + G VT P PSV Q QL ++ ++A Sbjct: 88 RIGFF-ALANNTFASAAEKGVRETASKYGATVTTLLNPFNPSVQ-QAQLRDSIAANKFDA 145 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI--------NQGTPAQLGGM 139 IV V+P L P K+ + +G+ V T+ P+ + I TP G Sbjct: 146 YIVEPVNPPALAPLFKQLIDKGIPVTTFGLTNGPDDSTARIQLEGQTLQTSRTPVSQGQD 205 Query: 140 LVDMAARQVN-KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 A + KD KVA + + K A++ K ++V T FG Sbjct: 206 AAKAAVEACDGKDPCKVAILRGTAVLAFDTNMAKALTAELDKSS-NVDVVATGFGQYLGG 264 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGF 245 S + IL A D+D ++ A QA K D++ IV Sbjct: 265 PSRTAMQNILTAEPDVDVLVTLGDQMTVGAEQAIRAAGKTDQIKIVSM 312 >UniRef50_D0BM84 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Lactobacillales RepID=D0BM84_9LACT Length = 359 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNA 87 ++ I K F+ + GA +A ELG +T+ GP E +++ Q++ +NN +N+ A Sbjct: 40 KVEVIAKGFQHDFWKAVNKGASKAADELGAKITFVGPQNETAIAEQLEQLNNAINKNPKA 99 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 I ++A+ + A+K+A + + ++ +DS Sbjct: 100 IALAALDTEAELDAIKQAQSKNIPIIGFDS 129 >UniRef50_B2JMA8 Putative simple sugar transport system substrate-binding protein n=4 Tax=Burkholderia RepID=B2JMA8_BURP8 Length = 344 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 E V+ Q Q + N + QGYNAI++ AVSP L +K+A G+ V+++D C +Y Sbjct: 79 ENQVTEQAQQVQNLILQGYNAIVIDAVSPTALNGTIKKACAAGIVVVSFDGVVDEPC-AY 137 Query: 127 YIN 129 +N Sbjct: 138 RVN 140 >UniRef50_C0CRA5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRA5_9FIRM Length = 382 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 8/189 (4%) Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD---SDTKPECRSYY 127 S Q+ I + + G +AI+V+A++ DGL L+ A + G++V+ D S TK + Sbjct: 119 SKQISDIRDLITMGCDAIVVTAITADGLNDVLEEAEEEGIKVVNCDNLSSSTKLTSKVMV 178 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 + G + + Q+ + ++ T TD N+ + +A+ P EI Sbjct: 179 ----SDYDFGKLCGEWLGEQLPDGGKVIELNGTAGTSTDTNR-AAGMEDGLAEASPDSEI 233 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFST 247 + + D + E +L Y ++D +++ AA +A E V + G ++ Sbjct: 234 IASVNADWDYATAKTAVEELLNTYPEIDGVLSQGGAMTQAAMEAFEAAGRKLVPMTGEAS 293 Query: 248 PNVMRPYVE 256 +R +VE Sbjct: 294 NGFLRSWVE 302 >UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional regulator n=15 Tax=Bacteria RepID=A8L4W4_FRASN Length = 363 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 41 FFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 FF +GAQQA +E V++ T G + + QV I N V G I+++ + Sbjct: 71 FFVKMRDGAQQAAREQKVELLTATGRFDGDYASQVSAIENMVAAGARGILITPNDSKAIV 130 Query: 100 PALKRAMQRGVRVLTWDSDTKPE 122 PA+++A RGV V+ D T PE Sbjct: 131 PAIEQARHRGVLVIALDVPTDPE 153 >UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW07_CLOB8 Length = 326 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 10/217 (4%) Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GA++A KE G V + GPT S ++L + + + II + AM+ Sbjct: 59 GAERAAKERGAVVEFLGPTTASTEDGLKLFDMATSAKVSGIITYVQEEGQYKKKINSAME 118 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD---KAKVAFFYSSPTV 164 +G+ V+T DSD + R Y+ GT L G + A +++ K VA V Sbjct: 119 KGIPVVTIDSDEEDSNRIAYV--GTDNVLAGQV---AGKEMVKQIGTSGNVAIVMGGKNV 173 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 +Q + V E + K + +IV T ++ IL +++A+ A Sbjct: 174 KNQKERV-EGFTQYIKSNSNLKIVDTDSSDAMLLEAEIITRKILNRNDNINALFCTSALD 232 Query: 225 LPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTV 260 AA+A ++L D+V I+ F + + G V Sbjct: 233 GIGAARAVKDLNYKDRVKIICFDDLDDTLSNIRNGLV 269 >UniRef50_B1G5Z1 ABC sugar transporter, periplasmic ligand binding protein n=3 Tax=Proteobacteria RepID=B1G5Z1_9BURK Length = 379 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 7/128 (5%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TKPECRSYYINQG 131 Q+Q IN+ V G AII+ +SP L A+K A +GV V +D + T+P + I+Q Sbjct: 88 QIQQINSMVQAGAKAIIIYPISPTALNRAIKNACSKGVVVAAYDGEVTEPCAHNVTIDQ- 146 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 Q G + + A+ +N K + P + + AKA AK +PG ++V Sbjct: 147 --HQAGTVTAEWLAKTLN-GKGNIVLINGVPGTSVDRARTEAAKAVFAK-YPGIKVVAEG 202 Query: 192 FG-YNDAT 198 G ++ AT Sbjct: 203 TGMWSQAT 210 >UniRef50_C0BXQ7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXQ7_9CLOT Length = 320 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 21/201 (10%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF + GAQ A E + Y + + Q Q+ + + + +AI+ + + + + Sbjct: 53 FFVNISKGAQDAAGEGDEVLVY--SFDDDANKQSQIFEDCITKKVDAILTTILDSEAIIT 110 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD----------MAARQVNK 150 +L++A Q G+ V+T D+ Y +G ++D +A + Sbjct: 111 SLRKAEQAGIPVITMDA--------YPDGKGVEDLYAAAVLDDLYQAGHDHGVALCEAIG 162 Query: 151 DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKA 210 K K+ + + + Q + K +A E+P EIV G D L L+ Sbjct: 163 GKGKIGWVWYTGASEVAKQRCEGFKDAVA-EYPDVEIVAYSEGSVDTESCLSQISAQLQN 221 Query: 211 YSDLDAIIAPDANALPAAAQA 231 YSDLDA AP ANA AA A Sbjct: 222 YSDLDAYWAPWANAGMAAVTA 242 >UniRef50_D1N9K7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9K7_9BACT Length = 319 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 6/187 (3%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 QV I N + + NA++V P L + A ++G+ ++T D + + G Sbjct: 76 QVSRIENLMVRNVNALVVLPQEPGPLTNVCEAARKQGIFLVTVDRGLDKPVQDVNV-AGD 134 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 A G A ++ K + P V + ++ V + +IAK HPG +++ +Q Sbjct: 135 NAGFGRAAAQAIAGALD-GKGDILVMEGIPCVVNTDR-VTAFREEIAK-HPGIKVLESQS 191 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN--LKNDKVAIVGFSTPNV 250 Y D K L+ E L+ Y +DA+ D + L A +A + K+ K+ + G + +V Sbjct: 192 AYWDTEKGLKLMENFLQKYKKIDAVWVGDDDVLLGAMKALKESGRKDVKLMLGGGGSKHV 251 Query: 251 MRPYVER 257 ++ +++ Sbjct: 252 VKMVLDK 258 >UniRef50_A3QHG3 Sugar-binding protein, putative n=8 Tax=Gammaproteobacteria RepID=A3QHG3_SHELP Length = 368 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 R A +PK G FF G + A ++L V+ Y GP SV Q ++I ++QG + Sbjct: 57 RFAVVPKFYG-AFFDQSKLGCEAAARQLKDVECIYLGPEISSVRLQDKVIEQLIDQGIDG 115 Query: 88 IIVSAVSPDGLCP-ALKRAMQRGVRVLTWDSD 118 I V+ L +L +A G+ V+T+DSD Sbjct: 116 IAVAITQSKFLAENSLTKAKAAGIPVITYDSD 147 >UniRef50_C3KNR3 Ribose ABC transporter, ribose-binding protein n=5 Tax=Rhizobiales RepID=C3KNR3_RHISN Length = 341 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 7/193 (3%) Query: 54 KELGVDVTYD-GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRV 112 K+ GVDV V GQ+ I NF+ +G NAIIV+ SP P +A + G+ V Sbjct: 56 KDKGVDVEVSVQSANVDVPGQIAHIRNFIAEGVNAIIVNPNSPTAFDPIFAQAKEAGILV 115 Query: 113 LTWDSD-TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWV 171 + D++ + P+ I+Q G + + K KV V Sbjct: 116 IATDAEVSSPDAVYVGIDQTAWGAAGAKWL----AETLDGKGKVVAINGVAGHPANEMRV 171 Query: 172 KEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA 231 K+ + K+ P +IV D + Q + IL Y D++ ++ D A A Sbjct: 172 AGYKS-VLKDFPDIQIVNEVNANWDQAQGQQAMQNILATYPDINGVVVQDGMAAGAWKSI 230 Query: 232 AENLKNDKVAIVG 244 + K D++A G Sbjct: 231 MDAGKKDQIAATG 243 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 29/246 (11%) Query: 47 NGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRA 105 N QQA LG+ G SV Q+ +I N+V+QG + II+ + +GL AL+ Sbjct: 100 NAVQQACNALGIKCEIQAGSQHASVEEQLTIIENYVSQGVDGIILVPAASEGLISALQEC 159 Query: 106 MQRGVRVLTWDSDTKPECRS-------YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFF 158 + V+ D+ +Y GT +GG LV Q+ D K A Sbjct: 160 ESANIPVINLDTKLDDSTLKTLGKDIPFY---GTDNYVGGQLVGEEVAQMYPDGCKTAIL 216 Query: 159 YSSPTVTDQ----NQWVKEAK---AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 T+ N ++ +A +A++H WE T GY + I++A Sbjct: 217 RGVQGQTNDDDRYNGFLDKAGDVVDLVAEQHANWE---TDQGYT-------AIQNIIQAN 266 Query: 212 SDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQ 270 DL I + A QA + D++ I + YV G ++ Sbjct: 267 KDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEGLQYVVDGKFVSTCAQQPIK 326 Query: 271 QGKISV 276 GK+ V Sbjct: 327 MGKLGV 332 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 116/288 (40%), Gaps = 20/288 (6%) Query: 10 ALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS 69 AL+S G+A + N IA I FF + GA+ ELG T + Sbjct: 13 ALISMAGVAGAASN----GLIAIITPSHDNPFFKAEAEGAKAKATELGY-TTLVASHDDD 67 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD---SDTKPECRSY 126 V+ Q QLI + + AII+ D LK+A G+ D ++T Sbjct: 68 VNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREINETGIAVSQI 127 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK-EAKAKIAKEHPGW 185 N AQLG A + V K + +D N V+ + + EH Sbjct: 128 VSNNYQGAQLG------AEKFVTLMGGKGKYIELLGRESDTNAHVRSQGYHDVIDEHSDM 181 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDANALPAAAQAAENLKNDKVAIVG 244 ++V Q T++ E IL+A D+ +I+ D AL A A +ND V +VG Sbjct: 182 KMVAQQTANWSQTEAFNRMESILQANPDITGVISGNDTMALGAEAALKAAGRND-VVVVG 240 Query: 245 FSTPNVMR-PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 F + +R + G +K L Q +++V AD LK G KTG Sbjct: 241 FDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTG--KTG 286 >UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Proteobacteria RepID=A5G0N2_ACICJ Length = 345 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 21/160 (13%) Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRSY--- 126 S QV + N +NQG A+I++ + GL PA +A + + +LT D T +C Y Sbjct: 100 SRQVADVENMINQGAQALIIAPLDSTGLQPAFAQAAAKHIPILTLDRRTAGSKCSDYLSF 159 Query: 127 -----YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-- 179 Y QG ++ AR++ K A + V K A Sbjct: 160 LGSNFYFKQG----------EIDARELAKATGGHAMVAEIQGAYGNSVEVARTKGFAAGL 209 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA 219 K +PG +IVT Q G T + + IL A+ +++A+ A Sbjct: 210 KAYPGMKIVTEQTGNWFTTDAQKVMSQILLAHPNVNAVYA 249 >UniRef50_C0RJU8 Periplasmic binding protein/LacI transcriptional regulator n=38 Tax=Brucellaceae RepID=C0RJU8_BRUMB Length = 309 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 F++ NG +A K+ GV V Y P + QLI+ +NQ ++VS D L P Sbjct: 40 FWSVVKNGVAEAAKDTGVQVEYRAPETFDMVQMAQLIDAAINQKPQGLVVSIPDADALGP 99 Query: 101 ALKRAMQRGVRVLTWDSDT 119 +++RA+ G+ V++ +S + Sbjct: 100 SIERAVAAGIPVISMNSGS 118 >UniRef50_C1F7H1 D-ribose-binding periplasmic protein, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7H1_ACIC5 Length = 407 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 17/227 (7%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVN-QGYN 86 RIA IP+ G + +GA+ A + V + ++ PT E ++ Q+ L+ ++ + Y+ Sbjct: 115 RIAIIPQTTGTPLWGPMFDGARLAATDQHVSIYWNAPTSEDNIKAQIALLERVIHSKKYS 174 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR---SYYINQGTPAQLGGMLVDM 143 II++ L A++ A + V+ + + SY +N GG Sbjct: 175 GIILAPDHDLALMSAVQDAEAAHIPVVIVSTGLRLPPNGDLSYVLNNDAE---GGKWAAN 231 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 ++ VA P + Q + + + + +P I +FG + Q Sbjct: 232 YLGKLLHGHGTVAVIGIDPAILGNLQRERSFETTLHESYPNISIAARRFGDYNVPHQTQI 291 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENL-----KNDKVAIVGF 245 A ILK + + AI+A + PAA + N K +V ++GF Sbjct: 292 AASILKRFPSISAIVAVN----PAAERGTWNTLLADDKTHRVKVIGF 334 >UniRef50_Q1IJE4 ABC sugar transporter, periplasmic ligand binding protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJE4_ACIBL Length = 327 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 39 VGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGL 98 V ++ + G +A + GV GP +VQ N Q + I+VS + Sbjct: 40 VEYWKTAQAGLTKAAAQYGVKWDVRGPENYDPQAEVQEFRNAAAQKPSGILVSVADASLM 99 Query: 99 CPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNK--DKAKVA 156 PA+ A+ G+ VLT DSD R Y+I GT + G L A R V K K V Sbjct: 100 QPAIDEAINAGIPVLTIDSDAPKSKRLYFI--GTNNRQAGTL--GAKRLVEKLHGKGNVV 155 Query: 157 FF-YSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 FF P + ++ K+ + ++PG +IV Sbjct: 156 FFTMPQPNLDERLAGYKD----VLSDNPGIKIV 184 >UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Thermoanaerobacterales RepID=B0K232_THEPX Length = 324 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 34/277 (12%) Query: 8 KIALLSALGIAAISMNVQAAERIA--FIPKLVGVGFFTSGGN-----------GAQQAGK 54 K+ L+ + IAA+S+ + +++ K F+ N GA A K Sbjct: 3 KVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDAAK 62 Query: 55 ELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 V + ++ P ++ ++Q ++ + + II + ++ A + G+ V+T Sbjct: 63 RYNVAIEFNAPKFNNIQEELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPVIT 122 Query: 115 WDSDTKPECRSYYINQGTPA-QLG---GMLVDMAARQVNKDKAKVAFFYSSPTVTDQ-NQ 169 ++D K R +I GT + QLG G L+ Q K KA +A S+ D NQ Sbjct: 123 IENDAKDSKRQAFI--GTNSFQLGEEAGKLM----IQATKGKANIAIIVSNDYQLDTVNQ 176 Query: 170 WVK-EAKAKIAKEHPGWEIV---TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANAL 225 +K K++P ++V T++ G A + Q+ I+ + +++AI D+ Sbjct: 177 NLKINGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQS---IISSKQNINAIYTTDSVDT 233 Query: 226 PAAAQAAENL-KNDKVAIVGF-STPNVMRPYVERGTV 260 AQ + K +AIVG+ T +++R Y+++G + Sbjct: 234 IGTAQVIVDFNKVGDIAIVGYGDTADILR-YIDKGII 269 >UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C307_9CLOT Length = 372 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 13/175 (7%) Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS-------DT 119 E VS QV+ + Q AIIV+A+ + L +K A G+ V +D+ D Sbjct: 81 ENDVSKQVEQFKTVLTQDPKAIIVTAIDSESLIDCVKEANDAGIPVGVYDTPITGGDIDI 140 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 +C + Q Q ++VD + ++K KV + + Q K+ + Sbjct: 141 TVDCDNLMAGQ----QAAEIIVDKLKEKNGEEKGKVLNVFGD-LASQVMQERKQGFDNVM 195 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 +++P E++ G D S A L A D+DA+ AP NA +A E+ Sbjct: 196 EKYPNIEVIEAS-GKGDRLLSQDAASNALAANEDIDAVHAPCDNAFYGVYEAVES 249 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 19/239 (7%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF G +A ++ G +V + + + Q+ LI NF+ QG + I+V + +GL P Sbjct: 73 FFVDMIEGGNKAAEDYGCEVIWK-SADGNFDNQISLIENFIEQGVDCILVDPLDSEGLKP 131 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 +++A G+ +T E + Y + ++ +M A+ + ++ K A Y Sbjct: 132 VIEKASAAGIPTITMAGQVDVE--TNYTTVYNDEENTRIIAEMTAKMIG-EEGKTALLYG 188 Query: 161 SP--TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII 218 + V+D Q K A + K +P +V ++ T ++ A+ ++ A DL AI Sbjct: 189 NKGNLVSDLRQ--KGYYAGMEK-YPNITVVEQPTNWDPPT-GMKAAQDLIAANPDLKAIH 244 Query: 219 APDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGT--------VKEFGLWDV 268 AA QA + K ++ + + + VE G K+ G W++ Sbjct: 245 CISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDALKAVESGQFTSTVLTGAKKTGYWNI 303 >UniRef50_B1KAQ4 Periplasmic binding protein/LacI transcriptional regulator n=31 Tax=cellular organisms RepID=B1KAQ4_BURCC Length = 356 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNA 87 +IA + L FF + GAQ+ + LG+D+ Y+G + + Q + I ++ G +A Sbjct: 49 KIALVNYLSTGDFFQAYEAGAQKQARALGIDLRIYEGRQD--AAEQREQIQQAISIGVSA 106 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TKPECRSYYINQGTPAQLGGMLVDMAAR 146 IIV+ P+ L ++RA+ +G++V+ +D D P+ N L +L+D A + Sbjct: 107 IIVNHGLPESLKDVVQRALDKGIKVVAFDVDLANPKVPQIEQNDR---DLANLLLDQAVK 163 Query: 147 QVNKDKAKVAFFY 159 N D + Y Sbjct: 164 D-NGDAFSAGYVY 175 >UniRef50_A7NMH5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Roseiflexus RepID=A7NMH5_ROSCS Length = 372 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 20/200 (10%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TKPECRSYYI 128 V+GQ+Q + N +N+G +AI+V+ +GL L+ A+ +G+ V++ D + P + I Sbjct: 96 VAGQIQQLQNLINKGVDAILVNPSDVNGLNDTLQEAINKGIIVISVDQELNTPGVYNVGI 155 Query: 129 NQGTPAQLGG-MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 +Q A++ L + Q N + F P + + V+E + KE+P ++ Sbjct: 156 DQKEWAKISARWLAEKLGGQGN--IVLIEGFPGHPANVARMEGVEE----VLKEYPNIKV 209 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFST 247 + + G D Q L ++ +LD D A+ A QA V + Sbjct: 210 LGRETGKWDEATGQQVMSNFLASFPNLDGYWTQDGMAI-GAMQA-----------VMAAN 257 Query: 248 PNVMRPYVERGTVKEFGLWD 267 P+ V G + LWD Sbjct: 258 PSKWPVLVGEGRCQFLQLWD 277 >UniRef50_B0K612 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Bacteria RepID=B0K612_THEPX Length = 392 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 14/250 (5%) Query: 31 AFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIV 90 A + G + T+ G + +LG+ V QV I N + N I+ Sbjct: 94 AIVLHYAGNDWSTAQVEGLKDTFAKLGIKVVAVTDANFKAEKQVSDIENVLALKPNIIVS 153 Query: 91 SAVSPDGLCPALKRAMQRGVRVLTWDS--DTKPECRSYYI-----NQGTPAQLGGMLVDM 143 V P PA K+A Q+GV+++ D+ D + + Y N G G + D+ Sbjct: 154 IPVDPVSTAPAYKKAAQQGVKLVFMDNVPDGLQQGKDYVSVVSADNYGN----GVIAADI 209 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 A+ + K K+ Y NQ V+ + I +++P +IV + G+ D Sbjct: 210 MAKNLGY-KGKIGVIYYDANFFVTNQRVEAFEKTIKEKYPDIKIV-ARGGFTDPNAVGSV 267 Query: 204 AEGILKAYSDLDAIIAP-DANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKE 262 A+ +L + DL+ I A D A A A +ND V NV + E G VK Sbjct: 268 ADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAGRNDLVITTIDLGNNVAKIIAEGGLVKG 327 Query: 263 FGLWDVVQQG 272 G QG Sbjct: 328 LGAQRPYDQG 337 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 10/258 (3%) Query: 39 VGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGL 98 V +F+ G +EL V++ + + + Q+ I F+ +G + II+ V + L Sbjct: 66 VPYFSKLVEGMTDLQEELNVELDVQDAQDDT-NTQINQIQTFIAEGCDLIIMMPVQLESL 124 Query: 99 CPALKRAMQRGVRVLTWD-----SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA 153 P + + ++T D SD K + G GG Q+ D+ Sbjct: 125 IPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGELVHQLLGDEG 184 Query: 154 KVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYS- 212 +A + + Q + + +++ PG EIV Q D ++++ + L ++ Sbjct: 185 SIALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAITVTQNFLTRFAK 244 Query: 213 -DLDAIIAPDANALPAAAQAAENLKNDKV--AIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 ++DAI+A D + A A ++ D++ ++G+ P+ + ++ + L Sbjct: 245 GEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDMYGSTLQAPY 304 Query: 270 QQGKISVYVADALLKKGS 287 G +++ VA L +GS Sbjct: 305 DMGALTLQVAYQCLTEGS 322 >UniRef50_UPI0001C31F5B ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31F5B Length = 344 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 20/213 (9%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPTEPSVSGQVQLINNFVNQG-YN 86 R+AF+ + + Q+ + GV++T +D +P+ Q + + V G Y+ Sbjct: 45 RVAFVNASMANAVLQAAYQEMQRVAEAEGVELTAFDAGFDPAK--QFAQLQDVVASGQYD 102 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWD-------SDTKPEC--RSYYINQGTPAQLG 137 +IV+ + +GL P ++ A+ G++V + + T+P+ S+ + P G Sbjct: 103 GVIVAPLDGNGLVPGVEAAIDAGLKVGSLNQAIGSRLDTTEPQVDGMSFAVIH-PPVTSG 161 Query: 138 ---GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 G L A R V D +V F Y S + Q +++ ++ P E+V G Sbjct: 162 RDMGRLTVEACRDV--DPCEVGFLYGSKALP-LGQALRQGWDGAVEDSPNIEVVAEGDGN 218 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 DA L+ + L+A+ +D I+ PD + + A Sbjct: 219 FDAQGGLKVVQDFLQAHPGIDVIVGPDPSVVGA 251 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 10/187 (5%) Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD-SDTKPECRS 125 E V+ Q + +F+ G+ AI++ G+ PA++ A G+ V T D + P + Sbjct: 89 EFDVARQKNQVKDFIVAGHAAIVLCPCDSRGIGPAIQEATAAGIPVFTADIACLAP--GA 146 Query: 126 YYINQGTPAQLGG--MLVDMAARQVNKDKAKVAF--FYSSPTVTDQNQWVKEAKAKIAKE 181 ++ LGG + V KV F ++ + + Q KE K E Sbjct: 147 EVVSHIATDNLGGGKQAAEAMIEAVGSAGGKVVILDFKAAESCILRVQGFKEVIDKHNSE 206 Query: 182 HP--GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA-PDANALPAAAQAAENLKND 238 +P IV+ G KS + AE L+A+ DL I A D +AL A A + K D Sbjct: 207 NPSSAITIVSELPGDGQKDKSYKAAEDALQAHPDLAGIFAINDPSALGARAALEKANKAD 266 Query: 239 KVAIVGF 245 +V IVGF Sbjct: 267 QVKIVGF 273 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 17/231 (7%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 VS Q+ I+NF+ Q NAI+V V G+ P +++A Q G+ V+ + Y Sbjct: 71 VSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIALGIQS---AGGKYTF 127 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 G+ G L ++ AK+ + +P ++ + + K ++ G VT Sbjct: 128 VGSKNIDAGRLQGEYMKEHLPKGAKILYLEGTPGLSHTQE-----RKKGFEDALGRSDVT 182 Query: 190 TQFGYN---DATKSLQTAEGILKAYSDLDAIIAP-DANALPA--AAQAAENLKNDKVAIV 243 T + D + ++ E ++++ DAI+A D AL A A Q A+ LK V I Sbjct: 183 TLASLSANYDRAEGMKVTEDWIQSFPKFDAIVAANDQMALGALEALQGADRLKG--VMIS 240 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 G ++ GT+ + D Q K + V + LKKG +KL Sbjct: 241 GVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEVVEG-LKKGEDAPAEKL 290 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/215 (19%), Positives = 96/215 (44%), Gaps = 9/215 (4%) Query: 38 GVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPD 96 + F+ G + A E G +VT GP +E + Q + + + Q +AI+++A + Sbjct: 50 AIDFWKVLITGVEDAANEFGANVTVIGPPSETEIDTQTEQLKQAIRQKPDAIVMAATDYN 109 Query: 97 GLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQLGGMLVDMAARQVNKDKA 153 L P ++ ++ G++++T DS + +I N + G + + + A Sbjct: 110 RLVPVAQQIVKAGIKLITVDSRINSDDALSFIATDNIAAGEKAGEEMAKLLPESSSSKVA 169 Query: 154 KVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD 213 +++ Y + + ++ + V++ + H E+ +T + K+ + + +L Sbjct: 170 IMSYVYGTSSQLEREKGVRQW----LEGHSHIEVASTLYSEGRLEKAYELTKELLSEDPG 225 Query: 214 LDAIIAPDANALPAAAQAAENLK-NDKVAIVGFST 247 + I+ + + A +A +L + KV +VGF + Sbjct: 226 IKGIVGLNEPSTVGAGRAIRDLGLSGKVKLVGFDS 260 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 41 FFTSGGNGAQQAGKELGVD-VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F+ GA+QA ELGV+ + G E V Q+ LI+ + G +A++++ + Sbjct: 49 FYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQLAAGIDALVIAPADSIAIL 108 Query: 100 PALKRAMQRGVRVLTWDS 117 P L RA + GV+++ D+ Sbjct: 109 PVLIRANELGVKIVNIDN 126 >UniRef50_Q16BW0 Ribose ABC transporter, periplasmic binding component, putative n=3 Tax=Proteobacteria RepID=Q16BW0_ROSDO Length = 378 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 15/159 (9%) Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTKPEC 123 T V+ Q+ I +F+NQGY+AI+ AVSP+G ++ A + V V+ +D+ DT Sbjct: 103 TGTDVAAQLGAIEDFINQGYDAIVTIAVSPEGFDRVIRLADRNDVVVVPFDNVLDTD--- 159 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKA----KVAFFYSSPTVTDQNQWVKEAKAKIA 179 + +NQ ++G M Q+ K+ +V + D++ +E I Sbjct: 160 KVMQVNQDQ-LEMGRMYARWLIEQLGDQKSGKILEVRGLQGNSVDRDRHIGFRE----IM 214 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII 218 + W+IV ++D T TA+ I + + DA++ Sbjct: 215 EPSGDWDIVEVVGNWDDGTAQKVTADAI-AVHKEFDAVV 252 >UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=Pseudonocardineae RepID=A4FMX8_SACEN Length = 323 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 6/258 (2%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 +A + + G F+ S A+Q G ++ P + + Q Q++ + A+I Sbjct: 37 LALLTGMRGEPFYVSMECAAKQQAAAAGYNINAQAPEKFEQAEQSQMLTGIIGTRPGAVI 96 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI-NQGTPAQLGGMLVDMAARQV 148 ++ L L++A GV+V+ + DT E RS + + + GG L Q+ Sbjct: 97 IAPTDDKALAAPLQQAKNNGVQVV--EVDTALEDRSIAVASLSSDNYAGGKLAAQTLAQL 154 Query: 149 NKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 K V + + ++ K + +IAK HP ++ TQ+ N+ + Q Sbjct: 155 TGGKPGAVLALNTKAGTSTTDERAKGFEEEIAK-HPNLRLLPTQYTENEPATAAQIVSAT 213 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L A DL + A + N A A N ++ +V +VGF + G V+ Sbjct: 214 LAANPDLVGVFATNLNTGEGAGTALANAGRSGQVQLVGFDASPKQVEDLRNGRVQALIAQ 273 Query: 267 DVVQQGKISVYVADALLK 284 D G+ V A A +K Sbjct: 274 DPAAIGREGVDRAIAAIK 291 >UniRef50_B1ZWL5 Putative D-ribose-binding periplasmic protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZWL5_OPITP Length = 314 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 MT ++ A ALG+ ++ AA I + K F+T+ GA +A ++ G+++ Sbjct: 1 MTSPLIRRFAGTVALGVC-LASTAAAAPTIGVLLKGRS-DFWTAVEKGAVEAAQKEGLEI 58 Query: 61 TYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 T P E + QVQL+N+ V QG AI+++ S D L + A+ +GV+V+ DS Sbjct: 59 TVKMPLAEADIGIQVQLLNSMVAQGLQAIVIAPDSKDALAAPVAAAIAKGVKVVVLDS 116 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 14/224 (6%) Query: 29 RIAFIPKLVGVG--FFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGY 85 +I +PK + F+T GA+ +E G ++ G +E GQ +LI + + Sbjct: 46 KIIMVPKTIDESNDFWTGLIEGAKLGAEEFGCEIEVVGSDSEDDYEGQNRLIEESIKKNP 105 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +A +++ S A++ A+ G++V+ DS E + + T G + A Sbjct: 106 DAFLIAPCSYTHTTEAVQEAINAGIKVILVDSVIDKEIANGVV--ATDNFKAGKELGTFA 163 Query: 146 RQVNKDKAK---VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 + + K +K VA S T T++ ++E + ++ +IV Y+ A+ Sbjct: 164 KTILKPDSKIGVVAHVKGSSTATEREDGIREGLGE--DQNRIQDIVYCNSSYDLAS---D 218 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGF 245 E +LK ++D +I + + AA+ + + D+V +VGF Sbjct: 219 LTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGMEDQVKVVGF 262 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 11/258 (4%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TE 67 I LLS+ G + Q + I K+ ++ + GA+ A KE V + + P E Sbjct: 21 ITLLSSCGGPGSGADHQQIYDVDMIVKMDRGDYWKTTKLGAEVAAKEFNVRLNFVAPENE 80 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 V GQ++L+ + + +AII++A + L R + V++ DS+ + Sbjct: 81 NDVEGQIRLMEEAIERRPDAIILAASDYEALGQVTDRTSYYDIPVISMDSEVASTKVKTF 140 Query: 128 I---NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + N + LVD+ +++ + NQ +E P Sbjct: 141 VGTNNYEAGQKAAERLVDLTG-----PVSEIGIINFVKGARNANQR-EEGFLDYVARFPD 194 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIV 243 +V Q+ +D + + +LK + +L+ I++ A + A +A + L KV ++ Sbjct: 195 VHVVDIQYCGSDEYLAYKLTADMLKRFPNLNGIVSLSAESSIGAGRAVDELGYGGKVKMI 254 Query: 244 GFSTPNVMRPYVERGTVK 261 F P M ++ V+ Sbjct: 255 AFDNPPEMLELLQEEKVQ 272 >UniRef50_B5K960 ABC transporter, periplasmic sugar binding protein n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K960_9RHOB Length = 254 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 11/198 (5%) Query: 52 AGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 A + + +++ +D P + V+ Q + I + + + I V+ + + A++ GV Sbjct: 2 AKRGVEIEMIWDQPPQADVADQNRRIETNIGRQPDGIAVACLDRVTNVQLMNEAVKAGVH 61 Query: 112 VLTWDS---DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 V+ ++S D P ++ + Q G L + A ++ + +A S T +D Sbjct: 62 VINFNSFCDDAFP-----FVGPKSSVQDGYDLGEYLAEELGG-EGTIAILSGSLTASDHV 115 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 + ++ K +++ HP EIV Q + +++ E +L+A+ D+D I +A+ A Sbjct: 116 ERIEGFKDALSQ-HPEMEIVFEQPDNDILDQAITLTENMLQAHPDIDGIFGSNASNPIGA 174 Query: 229 AQAAENL-KNDKVAIVGF 245 A+A +N K ++ IVG Sbjct: 175 ARAVQNAGKAGEIVIVGM 192 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 18/238 (7%) Query: 32 FIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEP-SVSGQVQLINNFVNQGYNAII 89 FI K + F S +GA+ A + +++ GP P SV Q+QL+ + G +AI+ Sbjct: 60 FIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQLVEQAITDGADAIL 119 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY------YINQGTPAQLGGMLVDM 143 ++ G+ PA+++A G+ + T P ++Y +I G G + Sbjct: 120 ITPADSTGIVPAIEKANAAGIPIAT------PNTKAYGGDVLTWI--GVDNYTVGYELGT 171 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 A + + KV + + + V + K +PG E++ +Q + K + Sbjct: 172 ALCEALEGTGKVVLIEGTAGNSTSTERV-DGYLDAFKNYPGIELLDSQPADFNREKGMTV 230 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAI-VGFSTPNVMRPYVERGTV 260 E L+ Y ++D + + + + A +A + + DK + V F N ++ G + Sbjct: 231 MENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDNDCLDAIDAGDI 288 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 22/268 (8%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQG 84 A ++ + K + ++ S G G +LG++ Y +E GQ+ + N ++QG Sbjct: 55 AGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQG 114 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY--INQGTPAQLGGMLVD 142 +NA++ S + L PA++ A GV VL + P +Y + +G + + Sbjct: 115 FNALLFSPQTDANLIPAVEAATAAGVPVLNVNDAVIPSAANYVGNVQKGNGVNVANWFI- 173 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 A R D KVA P V Q I +E+V + ++ Sbjct: 174 -ANR---PDGGKVAVIEGQPGVYAAGQRTAGFTETITAGGK-FEVVASVPANWSREEAFN 228 Query: 203 TAEGILKAYSDLDAIIA-PDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE----- 256 A IL+ Y DL A D AL K ++VA+ F T + Y Sbjct: 229 AASTILQQYPDLIGFYANNDGMALGVVEAVKAAGKAEQVAV--FGTDGISDAYAAVRAGD 286 Query: 257 -RGTVKEFGLWDVVQQGKISVYVADALL 283 GTV F V G+I++ VA L+ Sbjct: 287 LTGTVDSF----PVLTGEIAMEVALRLM 310 >UniRef50_C5EPY5 ABC-type sugar transport system n=2 Tax=Clostridiales RepID=C5EPY5_9FIRM Length = 332 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 13/186 (6%) Query: 43 TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL 102 T+ N ++A G+D Y P +V QV+ I+ + + + +++ L P L Sbjct: 57 TAQINSFREALIPNGMDFIYHEPERYTVEWQVEDIHRLIREKVDYLVIVPADLASLAPVL 116 Query: 103 KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL--GGMLVDMAARQVNKDKAKVAFFY- 159 + A + + V+ D + +SYYI+ + L G + D+ A + ++ Y Sbjct: 117 QDAKEADIPVILIDQSAETIDQSYYISLISADYLKEGQICADLLAEKFGDTPCRIVEIYG 176 Query: 160 --SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE-GILKAYSD--- 213 SSP +++ +A +++P EI+ ++G D + + E ++KA + Sbjct: 177 TESSPGAQARSKGFHQA----LQQYPNMEIIDIEYGNFDRVTAQKAMENALIKASTSGQP 232 Query: 214 LDAIIA 219 +DA+ A Sbjct: 233 IDAVFA 238 >UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A2C8_ENTGA Length = 352 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 22/258 (8%) Query: 32 FIPKLVGVGFFTSGGNGAQQAGKELGVD-VTYDGPT-EPSV-SGQVQLINNFVNQGYNAI 88 FIP + ++ GA+ A KELG VT P+ EPS + I + I Sbjct: 40 FIPIVDTGAYWNPMKKGAEDAAKELGYTLVTKTSPSAEPSKKEKHIGFIKEATAKNVAGI 99 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRSYYINQGTPAQLGGMLVDMAARQ 147 ++ + +K AM + + V+T+D+D + P+ R+ Y+ GT G + A + Sbjct: 100 AIAPIEKKAFVDPIKAAMDKDIPVITFDADLENPDDRTAYV--GTDNVSAGKELGKRAAE 157 Query: 148 VNKDK-------AKVAFFYSSPTVTDQNQWVKEAKAKI-AKEHPGWEIVTTQFGYNDATK 199 K+K A V + PT+ D+ + +KE ++ + ++ + T + ++ Sbjct: 158 EMKEKGITGGSIAIVCVDVAQPTMIDREKGLKEGFEEVYGTDAKNFKFLATIQDNDQPSE 217 Query: 200 SLQTAEGILKAYSDLDAIIA-----PDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 S + EG + A DL + + PD + A K+ K+ GF + Sbjct: 218 SKKQLEGYISANKDLVTVFSLGSEGPDVGVMSAIESQG---KSGKILHYGFDYTDTWLKG 274 Query: 255 VERGTVKEFGLWDVVQQG 272 +E G + D Q G Sbjct: 275 IEDGRITAIVDQDAYQIG 292 >UniRef50_C2S5M5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cereus BDRD-ST26 RepID=C2S5M5_BACCE Length = 163 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAI 88 +A I K F+ + GA+QA E V++T+ GP TE V QV+++ + +++ +AI Sbjct: 47 VAIISKGFQHQFWQAVKKGAEQAADEYKVNITFVGPETEAQVDKQVEMLRSTLDKKPDAI 106 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVL 113 +A+ P L++A + R+L Sbjct: 107 GFAALDSKAALPLLEQAKTKRFRLL 131 >UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFD0_EUBSP Length = 367 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 27/247 (10%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNA 87 ++A I + F+ + G + +E GV + ++ +GQ+ ++NN + + Y A Sbjct: 79 KLAAIESTLTNSFWVTMQEGYEDTAEEYGVSIDVQATDSDTDTTGQLDILNNMLVKDYEA 138 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG-----MLVD 142 I VS ++ D L + A Q V+++T ++ +N+ + + GG + VD Sbjct: 139 IAVSPLTEDCLISGIVAANQNDVKIITTGNE---------VNEDSLKEAGGKIDAKITVD 189 Query: 143 MAARQV---------NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFG 193 + V K KVA + T + + AK E G E+V + Sbjct: 190 FYNQGVLGAQYIIDKTDGKGKVAVIAGNEGATQSD--ARRDGAKETFEDAGMEVVAVEQC 247 Query: 194 YNDATKSLQTAEGILKAYSDLDAI-IAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMR 252 DA K+ A I+++ D+ I D AL E D+VA+VG + Sbjct: 248 DFDAQKAYDAAAAIIESNPDIVGIACGNDDMALGVVRALEEKDVKDQVAVVGVDFTEEAK 307 Query: 253 PYVERGT 259 +E GT Sbjct: 308 AAIEEGT 314 >UniRef50_C5EKG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKG2_9FIRM Length = 343 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 50 QQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRG 109 Q+ KELGV++ Y + +++ Q I + V+QG IIV+ DGL ALK AM G Sbjct: 82 QEKAKELGVNLIYTDAS-GNIAKQASDIEDMVSQGVEYIIVAPQEEDGLQSALKSAMDAG 140 Query: 110 VRVLTWDSDTKPECRSYYINQ 130 + V+ D E + Y + Sbjct: 141 IGVILIDRSINGEAGNAYTTK 161 >UniRef50_D0LF96 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D0LF96_GORB4 Length = 345 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%) Query: 30 IAFIPKLV-GVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 IA I V G F+ GA+ A K+ V + Y ++P Q L+ + ++ + I Sbjct: 63 IAMITHEVPGDSFWDLVRKGAEMAAKKDNVKLVYS--SDPEAPNQANLVQSAIDSKVDGI 120 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V+ PD + PA+++A+ G+ V+ ++S Q Q G +A R V Sbjct: 121 AVTLAKPDAMAPAVRKALDAGIPVVAFNSGFD------NWKQMGVQQYFGQDETIAGRAV 174 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + + + +Q Q E++ K+ G+ T Q Y + +K + + E + Sbjct: 175 GERLTREGRKNVLCVIQEQGQVALESRCAGVKQ--GFTGGTYQVLYVN-SKDMPSVEATM 231 Query: 209 KAY----SDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 A +D ++ A A Q+ N ++ IV F T + P +E G VK Sbjct: 232 TAKLQQDPSIDTVVTLGAPIAQTAVQSKGNAGSN-TEIVTFDTNAALVPLIEGGQVK--- 287 Query: 265 LWDVVQQGKISVYVA 279 W V QQ + Y+A Sbjct: 288 -WAVDQQPYLQGYLA 301 >UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Bacteria RepID=A6C6N8_9PLAN Length = 375 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Query: 9 IALLSALGIAAISMNVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 +A++ ++ + N Q A + +A++ + F+ GA+QAG++LGV+V P Sbjct: 14 LAIIFSISLIPAGCNKQGASQKNDVAYVTNGIA-SFWVIAEKGAEQAGEDLGVNVEVRMP 72 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 + V+ Q +++ + QG + I +S + P LK + ++T DSD R Sbjct: 73 PQ-GVTDQKRMVQELLAQGIDGIAISPIDPANQNDLLKEIADNSI-LITQDSDAPDSPRE 130 Query: 126 YYI 128 YI Sbjct: 131 CYI 133 >UniRef50_B9R3G3 Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=2 Tax=Rhodobacteraceae RepID=B9R3G3_9RHOB Length = 357 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 38/78 (48%) Query: 47 NGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 NG AG ++GVDV Y P ++ ++I G N II + PD L +K A+ Sbjct: 91 NGIALAGDQMGVDVEYRNPPTGDLADMARIIEQAAASGPNGIITTLSDPDVLSGPIKDAV 150 Query: 107 QRGVRVLTWDSDTKPECR 124 G+ V+ +S T + R Sbjct: 151 ASGIDVIIMNSGTPDQAR 168 >UniRef50_B7S4D1 Predicted protein n=3 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S4D1_PHATR Length = 799 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 26/207 (12%) Query: 29 RIAFIPKLVGVGFF--TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ--LINNFVN-- 82 R +PK F+ G A+ A ++ V + GP ++G+ Q ++N ++ Sbjct: 53 RFGIMPKSTNNRFYDPVREGCEARAASYDINVLCDWVGPDWEDLTGKAQASVLNTLIDAK 112 Query: 83 -----QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPA 134 + I V+ V+ D L +RA+ G+ V+ +DSD+ R Y+ N Sbjct: 113 LAGDPDALDGIAVAVVNEDALQEPFQRALAAGMSVICFDSDSFKSSRQAYVGTDNFAFGE 172 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 QLG +L+ + + + V +S T N + + + A E W+ + Y Sbjct: 173 QLGKVLLQL------RPEGGV---FSVATFRGPNLLQRVSGIRFALEGTTWKELPDSILY 223 Query: 195 NDATK---SLQTAEGILKAYSDLDAII 218 D TK LQ E + ++ +L AI+ Sbjct: 224 EDITKPELGLQHFEDLKRSNPELGAIV 250 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 32/306 (10%) Query: 6 FKKIAL-------LSALGIAAISMNVQAAE------RIAFIPKLVGVGFFTSGGNGAQQA 52 FK +AL L+A G + S + ++A+ +I + K F+ S GA + Sbjct: 5 FKVLALGAIACLSLTACGSSPASSDGKSADAKSNSKKIILVSKGFQHTFWQSVKKGALEK 64 Query: 53 GKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 GKELG +V + GP E +V+ Q+ + N +N AI ++A+ P L++ G+ Sbjct: 65 GKELGYEVEFIGPKNETAVTEQLDQLKNALNAKPAAIGLAALDSKAAEPILQQIKNAGIP 124 Query: 112 VLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFF-YSSPTVTDQNQ- 169 V+ +DS + + T + G Q+ +K V + T T + + Sbjct: 125 VIAFDSGVDSDIPLTTVQ--TDNRTAGAKAAEKLAQLMGNKGTVGIVCHGQATTTGKGRC 182 Query: 170 -----WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 W+KE P +++ Q+ ++ K+ A+ I+K+ +D+ A+ + Sbjct: 183 FGFQDWMKE-------HAPDIKLLQEQWA-DERGKAADAAKAIVKSNTDVTAMYGSNEVT 234 Query: 225 LPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 Q E K ++ IVGF + ++ G V+ G +V AD + Sbjct: 235 AAGVLQGVKEAGKMGQITIVGFDSGKAQIDAIKSGDEAGAITQAPVKMGAETVAAADKAI 294 Query: 284 KKGSMK 289 K S++ Sbjct: 295 KGESLE 300 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 21/239 (8%) Query: 51 QAGKELGVDVTYDGPT---EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 Q KE G ++T D + E GQ+ ++ + +N+ Y A+++S +S L P +++A + Sbjct: 97 QKFKENGYNITLDMKSAQGEGDEQGQLSIVEDMINKKYTALLLSPISDGNLVPGVEKAKK 156 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD---KAKVAFFYSSPTV 164 + V+ + ++ I G A + G ++AA ++K + +VA P Sbjct: 157 NNIPVINVNDGI---IKNADIFVGPKAIMNG---ELAAEWISKKIGGEGEVAIVIGMPKA 210 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 Q + + G +IV Q D K+ AE +K Y +L AI + + Sbjct: 211 FAARQRTLGFENWMKSNAAGVKIVEKQNADWDRAKAKDLAEIWIKKYPNLKAIFC-NNDV 269 Query: 225 LPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG----TVKEFGLWDVVQQGKISVYVA 279 + Q A N + +VG + +G TV F L+ +G+I+V +A Sbjct: 270 MALGVQEAVNASKRDILVVGVDGIKEAYESIRKGEMDATVDSFPLY----KGQIAVEMA 324 >UniRef50_C1SFQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SFQ0_9BACT Length = 349 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 20/200 (10%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 IA I ++V F GAQ+ +G+ +T G + Q I +N G + I Sbjct: 38 HIALIRQMVEGEFMQMYRAGAQRQADLMGIKLTVFGKNMDN-QAQANFIYQAINMGVDGI 96 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRSYYINQGTPAQLGGMLVDMAARQ 147 I+ + + K A+ +G+ V+ +D D K PE AQ ML ++ Sbjct: 97 IIDHGLTETMVKPAKDALAKGIPVVAFDVDLKNPEIPQI-------AQDDHMLGRLSLEA 149 Query: 148 VNKD---KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW-EIVTTQFGYNDATKSLQT 203 + KD KA V + Y P + ++ E+ KI KE+PG E+ T G ++ S++ Sbjct: 150 MIKDFDGKANVGYVY-VPGILPLDKR-DESFTKIKKEYPGIKELART--GTLESPFSVKN 205 Query: 204 AE---GILKAYSDLDAIIAP 220 A+ IL++ +++A AP Sbjct: 206 ADQVKAILRSKPEINAYFAP 225 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 24/247 (9%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNA 87 IA + K + F+ G ++ G+ V +E V Q++LI N +++GY A Sbjct: 46 EIAIVLKTLSNPFWVEMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKA 105 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I ++ +SP PA+ A ++G+ V+ D E + GG ++ Sbjct: 106 IGIAPLSPVNTIPAIVEANKKGIYVVNIDEKVDMEQLK---------KSGGSVLAFVTTD 156 Query: 148 VNKDKAKVAFF-------------YSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 K AK A + + ++ ++ + K +++V +Q Sbjct: 157 NVKVGAKGAEYIIGKLPEGGEVAIIEGKSGNASGEFRRQGATEAFKADSKFKLVASQPAD 216 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRP 253 D +K+L A +++ Y +L AI A + A QA N K ++ +VG R Sbjct: 217 WDRSKALDVAANLIQKYPNLKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEART 276 Query: 254 YVERGTV 260 ++ G + Sbjct: 277 SIDEGKL 283 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 98/254 (38%), Gaps = 16/254 (6%) Query: 41 FFTSGGNGAQQAGKELGVDV---TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDG 97 FF +G GA KELG D ++DG V+ Q QLI + + A+I+ D Sbjct: 41 FFKAGAEGADAKAKELGYDTLVASHDG----DVNKQNQLIETAIARQAKAVILDNADADA 96 Query: 98 LCPALKRAMQRGVRVLTWDSD---TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAK 154 +L+R + G+ +D + T N AQL G + A + Sbjct: 97 SIGSLERLKKAGIPAFLYDREINKTGIAVTQIVSNNFQGAQLAG---EKFAELMGDGGEY 153 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 V P Q E I P +++V Q T++ E IL+A ++ Sbjct: 154 VELL--GPESDTNAQVRSEGFHDILDNFPEFKMVARQSANWSQTEAFSRMESILQANPNI 211 Query: 215 DAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT-VKEFGLWDVVQQGK 273 +I + + A A + V IVGF + +R + +G+ +K + Q + Sbjct: 212 KGVITGNDSMALGAEAALQAAGRKDVFIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQ 271 Query: 274 ISVYVADALLKKGS 287 AD ++ GS Sbjct: 272 RVAEQADLYIRTGS 285 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQGYNA 87 +I + K + ++ S G G + GV + Y P+E GQ+ + N + QGY Sbjct: 57 QIGGVSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQGYQG 116 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 ++VS + + L PA++ A RG+ V+ + P Y N Sbjct: 117 LLVSPQTDNNLQPAMETAASRGIAVVNVNDAVIPSATQYVGN 158 >UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6U6C1_SINMW Length = 319 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 3/185 (1%) Query: 40 GFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 GF + GA+ A KELGV V S S Q+ ++N + +AI++ S L Sbjct: 40 GFHEAIACGARAAAKELGVKVNIQAAPTYSASEQIPVLNAVMATSPSAIVLDPTSSTALI 99 Query: 100 PALKRAMQRGVRVLTWDSDT-KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFF 158 L A G +++ D+ P S + + +G A+ ++ KVA Sbjct: 100 APLMEAAANGAKIVAVDTTLDDPSVLSAVVGTDNES-VGRETAKALAKALDGKSGKVAQI 158 Query: 159 YSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII 218 S P ++ + +K + +I K++P + QF D K+ Q ++ A DL ++ Sbjct: 159 NSIPGISTVDARIKGFEEEI-KKYPNLTYIGNQFASEDIPKAQQAYVSLMSANPDLIGVV 217 Query: 219 APDAN 223 + N Sbjct: 218 SQSNN 222 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 19/216 (8%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY---DGPTEPSVSGQVQLINNFVNQGY 85 +I F + FF G ++ KE G D+ +G + V+ + N ++QG Sbjct: 69 KIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDLVQTNANGDAQQQVNDAI----NLLSQGV 124 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 A++++ + + PA+++A + V T D + + ++ A LG A Sbjct: 125 TALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSDGGKVTSFVASDNVA-LGQTAAKWIA 183 Query: 146 RQVNK-------DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 Q+ K + + + TD+ + + AK +P ++V Q G D Sbjct: 184 DQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAK----YPDIKVVARQEGAFDQE 239 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 KSL IL+ Y +DA+ + + A +A +N Sbjct: 240 KSLNAMTNILQKYPQIDAVFGANDDNTVGAEKAIDN 275 >UniRef50_C7MPN6 Monosaccharide-binding protein n=3 Tax=Actinomycetales RepID=C7MPN6_SACVD Length = 391 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 3/172 (1%) Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q+ I + +++G +A+IVS + L PA+++A G+ V+ +D +C +I+ Sbjct: 135 QISDIASLLSRGCDALIVSPNTTATLTPAVEQACDSGIPVIVFDRGVNTDCPVTFIHPIG 194 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 G + A +V + +A +++W A +I E G E+V +F Sbjct: 195 GYAFGATAAEFLADEVGEGGTVLALRVLPGVDVLEHRWA--AAERIFAER-GVEVVGVEF 251 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 ND + L+ +D I D A A +A E+ + AI G Sbjct: 252 TENDTAGAKSIVSDYLQREGRIDGIWMDDGTAAVAVLEAFEDQGMEPPAISG 303 >UniRef50_A9KIC8 Periplasmic binding protein/LacI transcriptional regulator n=7 Tax=cellular organisms RepID=A9KIC8_CLOPH Length = 356 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 48 GAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 G+++A KE V + GP E +++ QV+ INN +N+ +AI ++A+ + AL +A Sbjct: 60 GSKKAEKEFNVKTNFVGPEGEGAIATQVEQINNAINKKPSAICLAALDTNAALDALSQAK 119 Query: 107 QRGVRVLTWDS 117 +G+ ++ +DS Sbjct: 120 SQGIPIIGFDS 130 >UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL8_9FIRM Length = 312 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 17/200 (8%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAI 88 I + K ++ S +G ++A +LGV V P TE Q Q+I + + + +A+ Sbjct: 44 IGVVTKSRSSEYWMSVCSGMEKAASDLGVKVIIMSPDTETDEKTQQQMIGSLLKKDIDAL 103 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP------AQLGGMLVD 142 VS ++ LK+A ++G++V+++D+ + +G P ++G L Sbjct: 104 AVSPINSHNAKGYLKKAEEKGIQVVSYDTKI--------LEKGVPYIGIDNEKVGRELAQ 155 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 A Q+ K K V + + +K + I K + +I T+ GY++ + Sbjct: 156 YMAAQMKK-KGLVGIISGNLKQSSHASRLKGFRDYIDK-NTDIKIAFTESGYSNLRMPEK 213 Query: 203 TAEGILKAYSDLDAIIAPDA 222 +++ + DL+ I A A Sbjct: 214 EISRLMREHPDLNGIFATSA 233 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 13/246 (5%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVG--FFTSGGNGAQQAGKELGVD-VTY 62 K + L A +A I + A+ + K G G F+ S GA++ ELGV V Sbjct: 1 MKLVKLFLASSLAIIIGTLAFADTVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVVL 60 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P E V Q+ + + + +G AI ++ P+ L ++ A G+ V+ D+ + Sbjct: 61 SPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTKGINK 120 Query: 123 CRSYYINQGTPAQLGG-MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 ++ GT + G M D +V++ + VA +T + A + Sbjct: 121 GVTFI---GTDNKAGAKMAADFICDRVSRG-SDVAILQG--IITQSTGKARADGAHAGLK 174 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE--NLKNDK 239 G IV Q D + E IL L A+ A + N A +A + ++ ND Sbjct: 175 GCGLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKDADMLND- 233 Query: 240 VAIVGF 245 V +VGF Sbjct: 234 VIVVGF 239 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 21/225 (9%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD---TKPECRSY 126 ++ Q+Q I NFV+QG +AII++ V G+ P +K A + ++ + T P +Y Sbjct: 67 IAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVTLPAGMAY 126 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFF---YSSPTVTDQNQWVKEAKAKIAKEHP 183 G+ ++L G L ++ K V S+ D+ + V+E AK +P Sbjct: 127 V---GSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRGVEEVAAK----YP 179 Query: 184 GWEIV---TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 G +I+ T ++G +A T + L +DAI + + A A + K V Sbjct: 180 GIKILDKQTAKWGRKEAVDI--TTDWALTG-QQIDAIASNNDEMAIGAILALKQAKKSGV 236 Query: 241 AIVGFS-TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK 284 + G TP+ + Y+++G + D QG+ +V A L+K Sbjct: 237 LVAGVDGTPDALE-YIKKGDLALSVFQDAKGQGEGAVQTAIQLVK 280 >UniRef50_C5EMQ0 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMQ0_9FIRM Length = 343 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 3/244 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I PK + +G A + + GV++ Q+++I+ V++G +A+ Sbjct: 69 IIHTPKHAFIEELLAGIQAANKKIADYGVEIMDRYGEGYDADSQIRMIDELVDEGIHALA 128 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 + ++ + L+ +RG+ V SD +C +Y G GG ++ A + Sbjct: 129 IIPLNDKRVVDKLEELRKRGITVALMVSDIDVDCLAYV---GCDLYRGGRIIGGLAGMLG 185 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 +KV + + + + + K + + +P ++ ND + + A K Sbjct: 186 GRDSKVVYCTAPLEILGNVRRLDGLKDVLQERYPDIHLLGVCELQNDDLAAYRQAAIAFK 245 Query: 210 AYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 Y D D I+ + E + KV ++ + + RG V+ + Sbjct: 246 EYRDADTIVVTTGCTKGVLSAIEETVFEKKVNVITLDLAKPVEQAMARGLVQATVVQHPF 305 Query: 270 QQGK 273 QGK Sbjct: 306 LQGK 309 >UniRef50_C0C4T0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4T0_9CLOT Length = 334 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 72/325 (22%), Positives = 130/325 (40%), Gaps = 50/325 (15%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER----------------------IAFIPKLVG 38 M FK+++++ + IA +S++ A+ + FI + + Sbjct: 1 MKSKVFKRLSVVLVMVIALVSVSACTAKEPGSSDSKKEETTKKDKKSGKTKVGFIVQDLT 60 Query: 39 VGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDG 97 + +F S G + + ++V DG ++ QV + N + Q + I++ V Sbjct: 61 INYFLSVVKGVEDFQDKYDMEVQVIDGHSDAPT--QVDAVENLITQEVDCIVICPVDTVA 118 Query: 98 LCPALKRAMQRGVRVLTW-------DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNK 150 A+K A G+ V+TW D+ Y G A G ++D +Q Sbjct: 119 PEAAVKEAQAAGIPVITWSEKIEGADAWIAVNNYDYGFENGKIA--GQWILDNLDKQ--- 173 Query: 151 DKAKVAFFYSSPTVTDQNQWVKEAKAK---IAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + AKV + Y V + Q ++ + +A P E V Q G N ++ E Sbjct: 174 EDAKVMYVY----VKENEQLIERGEGMMDGLASLAPDAETVAVQSG-NTTESGMEAVETT 228 Query: 208 LKAYSDLDAIIAP-DANALPAAAQAAENLKND-KVAIVGFSTPNVMRPYVERGTVKEFGL 265 L + DL+ I+ D+ AL A K+D KV I G Y+ + T+ + G Sbjct: 229 LAKHPDLNVIVCSNDSVALGAYEAMVSAGKSDAKVCITGQDADEKNLEYISQDTILK-GT 287 Query: 266 WDV--VQQGKISVYVADALLKKGSM 288 D+ QG++ + +LK+G + Sbjct: 288 VDIGAYNQGELLCQSVEKVLKEGKV 312 >UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJT9_CLOCL Length = 330 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 14/243 (5%) Query: 48 GAQQAGKELGVDVTYDGPTEP-SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GA+ A KE + + P + ++ Q LIN V +A+++ S L ++ A+ Sbjct: 60 GAETAAKEFDIKLNIVAPEDGGDITIQQNLINEAVAMKVDALLLVPSSFQELVEPVEAAV 119 Query: 107 QRGVRVLTWDSDT---KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS-P 162 +G+ V+T DS K C N G LV +A ++N A V F + Sbjct: 120 NKGIIVMTVDSKVNTAKIACCIATDNLSAGKSAGEKLVSLA--RMNSVAAIVGFDKKTGS 177 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 D+ + +KE + K++ +++ D+ + + A+ ++ D+ IIA + Sbjct: 178 NEFDRYKGIKE----VTKDYKEIQVIDRWCDIKDSNGAERIAKELISNNEDISVIIALNY 233 Query: 223 NALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 A A+A E L K+ +V F Y+E GT++ + G ++ V +A Sbjct: 234 KASIGVARAIEKLGLKGKIKVVAFDGDYQEVKYMEDGTIQSVVIQSPFSMGYLA--VKNA 291 Query: 282 LLK 284 +LK Sbjct: 292 VLK 294 >UniRef50_D2B1D0 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B1D0_STRRD Length = 365 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 24/166 (14%) Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 + P + S + QV I + + Q +A+++ SP L P +++A GV V+ +DS E Sbjct: 84 NAPGDNSATEQVAQIKSLLLQKPDALLIDPSSPTALKPVIQQACAAGVTVVVFDSAIDSE 143 Query: 123 C----RSYYINQGTPAQ------LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK 172 C ++ +++ T A +GG + +R V + + F Sbjct: 144 CAYVLQNSFVDWATYAAKPLLEGIGGKGNVIVSRGVVGSQPESEMF-------------- 189 Query: 173 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII 218 + KI E+PG + T G D + + G+L + S +D +I Sbjct: 190 DTTKKILGEYPGVKTAATVNGMCDGATAQKAVLGVLSSVSKVDGVI 235 >UniRef50_B0NGB0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGB0_EUBSP Length = 340 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 13/185 (7%) Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 KE G D T T S + Q+ + NF+ G + I+V D L + A+ G++V+ Sbjct: 69 KEKGWDYTLQDCTNNSAT-QISQVENFITSGCDLIMVHPSDADALETVCQEALDAGIKVM 127 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNK----DKAKVAFFYSSPT---VTD 166 WD + ++ ++ LG + AA +N+ DK P+ + + Sbjct: 128 CWDDPMENTTANWILDN---TALGNEIGKTAAAFINEHYTADKPAEVCVIGKPSTKVLLE 184 Query: 167 QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 + +KE K + +EIV G +A ++ E +L+A+ D + A A+ Sbjct: 185 RANGIKEGLEKNC-DKGNYEIVAEVDGL-EANEAQSNVETVLQAHPDCSVFVGVGAGAMI 242 Query: 227 AAAQA 231 + +A Sbjct: 243 GSNEA 247 >UniRef50_B5WQM1 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderia RepID=B5WQM1_9BURK Length = 330 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 38/252 (15%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTYDGP-TEPSVSGQVQLINNFV 81 A + +A + K + +F G ++A KEL G + Y GP T S QVQ+I++ + Sbjct: 24 ADKTLALVVKGLDNPYFDLMHQGCERANKELNKQGYNCYYTGPATAADESAQVQIIDDLL 83 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE---CRSYYI---NQGTPAQ 135 +G ++ +S + + L+R V V+T D+D P+ R Y+ N A+ Sbjct: 84 TKGVASMAISPANAPAVAEVLRRRAAP-VPVITADADLLPKDASLRKSYVGTDNYELGAK 142 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK---------AKIAKEHPGWE 186 LG L + + N V +P + N+ + A+ K+A E+ GW Sbjct: 143 LGEQLKMLMPKGGN-----VCLVMGNPAAENINERAQGARDVLSGKKGITKLAGEN-GWH 196 Query: 187 IVTTQFGY--NDATKSLQTAEGILKAY-SDLDA--------IIAPDANALPAAAQAAENL 235 ++ Y +DA K+ Q + L A + LDA + AP A + A + + Sbjct: 197 EISGCPLYVNDDAAKANQMMQDTLTANPTGLDAFLLAGGWPLFAPQAYS-QVVAPIMDKI 255 Query: 236 KNDKVAIVGFST 247 KN K IV T Sbjct: 256 KNGKFVIVSADT 267 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 9/113 (7%) Query: 15 LGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQ-QAGKE----LGVDVTYDGPTEPS 69 LG+ A + ++ I K +F AQ QA K+ + V +DG E Sbjct: 23 LGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAFDGDNE-- 80 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GQV I N V QG I+++ S G+ A+K+A GV V+ D+ T PE Sbjct: 81 --GQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPE 131 >UniRef50_D2R6L4 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6L4_9PLAN Length = 376 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 67/245 (27%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPT------EPSVSGQVQLINNFVNQG-YNAIIVSAV 93 F+ + G Q+ K DV DG T +GQ++ + F Q A+ +SAV Sbjct: 55 FWDACNAGLQEGAKR--SDVAADGWTVVMEKNSGGAAGQIEKLRQFGTQSDIAAVAISAV 112 Query: 94 SPDG--LCPALKRAMQRGVRVLTWDSDTK----PECRSYYINQGTPAQLGGMLVDMAARQ 147 D + +K+ +GV+V+T D D P+ R YYI GT + G ++ AA++ Sbjct: 113 DADNPVIVEEMKKLQAKGVKVITVDGDINRERFPDARPYYI--GTDNIVAGRVLGTAAKE 170 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF-GYNDATKSLQTAEG 206 + K + KE G+ QF GYND + G Sbjct: 171 ILKSR--------------------------GKESGGY----VQFSGYNDNDNARSRMNG 200 Query: 207 ----ILKAYSDLDAIIAPDANALPAAAQAAENLKN------DK-VAIVG---FSTPNVMR 252 + +AY+++D + PDA +A EN++N DK VA+VG ++ P + Sbjct: 201 FKEAVGEAYTEIDRM--PDA---MNKDKARENVRNALTNHGDKIVALVGIWAYNAPAIAE 255 Query: 253 PYVER 257 ER Sbjct: 256 VVTER 260 >UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CHG6_9FIRM Length = 331 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 21/212 (9%) Query: 41 FFTSGGNGAQQAGKELGVD-VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F+ + +G + KELG++ + D +P+++ + + QG AI +S G+ Sbjct: 65 FYQTIRDGIESKAKELGMEAIVTDAELDPNIA--TNKVQDLTAQGCEAIALSCNDAAGVK 122 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFY 159 PA++ A GV + T+D T E + ++ GT GG L + ++D V Sbjct: 123 PAIENADAEGVAMFTFDCSTDSEAINCFV--GTDNYKGGQLGGQELLKYSEDGDTVGIIC 180 Query: 160 ---SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDA 216 +S + QN + + K+ + + DA K+ + E +L A D+ A Sbjct: 181 YPTASSCLDRQNGAL-----DVLKDEDRTVVYDNDY-QGDANKAQEIMENMLTANPDMAA 234 Query: 217 IIA---PDANALPAAAQAAENLKNDKVAIVGF 245 + P A AA +AA I+GF Sbjct: 235 VFCVGDPAATGALAAIKAA----GSDCKIIGF 262 >UniRef50_B5ZRZ8 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Rhizobium RepID=B5ZRZ8_RHILW Length = 305 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQ-AGKELGVDVTY-DGPTEPSVSGQVQLINNFVNQGYN 86 ++ FI K V FF + N A+ A + GV++ Y G + + GQ+ I + V +G Sbjct: 27 KLGFITKFP-VPFFATMENAAKDYAKRNPGVEIIYGQGTSATDIEGQIAQIESMVTRGVQ 85 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 I ++ V P + AL +A+ GV+V+ D++ P+ + T G + + Sbjct: 86 GIALTPVDPT-VSTALDKAVASGVKVVLMDNNI-PDWKGRTALATTNNFAAGKIAGEYLK 143 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL--QTA 204 V K + P V + VK + + G ++ G + T+ L A Sbjct: 144 TVLKAGDTLGILEGVPGVPALDDRVK----GMLEGLQGLDVKIVGKGATNCTEELGISVA 199 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAEN--LKNDKVAIVGFS----TPNVMRPYVERG 258 E +L DL AI A AA+A +N NDK+ +VGF ++ VE Sbjct: 200 EDLLTKNPDLKAIYAACGPPAAGAARAIKNSGTANDKIVLVGFDFCCGEEEALKSGVEDA 259 Query: 259 TVKEF 263 +V +F Sbjct: 260 SVAQF 264 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 19/223 (8%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 +S Q+ + +F+ +G + II+S V G+ A+ +A + G++V+T D + ++ Sbjct: 67 LSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPANNVDVTSFV- 125 Query: 130 QGTPAQLGG-MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 GT GG ++ A+ + +K VA PTV ++ K IAK +P +IV Sbjct: 126 -GTDNFAGGEKAAELMAKTIG-EKGNVAVI-DYPTVQSVVDRIEGFKKGIAK-YPDIKIV 181 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAI--IAPDANALPAAAQAAENLKNDKVAIVGFS 246 Q G ++L A+ IL+A D+ I DA A+A + L+N +V ++GF Sbjct: 182 AIQPGIT-RPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLEN-QVKVIGFD 239 Query: 247 TPNVMRPYVERGTVKEFGLWDVV-----QQGKISVYVADALLK 284 R V+ V + V+ Q GK++V A ++K Sbjct: 240 GMEEARNAVKNDPV----MVGVIAQYPDQMGKVAVETAAKVIK 278 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 48 GAQQAGKELGVDVTY-DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GA++ E G V + DG +PSV Q I+NF+ QG + II++ D L PA+K+ Sbjct: 54 GAEKVADEAGCKVIFADGKDDPSV--QASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVN 111 Query: 107 QRGVRVLTWD 116 G+ ++ D Sbjct: 112 DAGIPLVMAD 121 >UniRef50_C6JBS1 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JBS1_9FIRM Length = 369 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 22/252 (8%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG----------VDVTYDGP-TEPSV 70 + + A RIA + K V ++ G + A KE+ + +T++GP E V Sbjct: 64 IKIHAGSRIAVVSKCVKGEYWKMVKKGMEDAVKEINKAYGYKKDDQITMTFEGPDNEEDV 123 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT--KPECRSYYI 128 Q+ I+ + + + + +SA D L+ A + G+ V+ +DS+ K ++Y Sbjct: 124 ETQINTIDAVIAENPDVLCISASDMDSCEAQLEAAKENGIPVIAFDSNVAEKKLVKAY-- 181 Query: 129 NQGTP-AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 +GT Q+G M + K KVA F + V+ I K + E+ Sbjct: 182 -RGTDNVQVGKMAAYQLGSALGK-MGKVAVFSAQQKTKSVQDRVEGFMNNIGK-YGDIEV 238 Query: 188 VTTQFGYNDATKSLQTA-EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFS 246 V T Y+D ++ + + +L+ Y LD + +A+ ++ ++D A+VG Sbjct: 239 VETI--YSDQVDDMEASMKEVLEKYPTLDGVFCTNADITEMYLNLEKSDEHDAPALVGVD 296 Query: 247 TPNVMRPYVERG 258 + + G Sbjct: 297 ATTKQQEAIRNG 308 >UniRef50_UPI0001C3204B ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3204B Length = 372 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 E + QV INN + + ++V A SP L PALKRA G+RV+++D C Sbjct: 89 ENTTQAQVASINNIIQGRPDVLLVDAGSPTALNPALKRACAAGIRVISFDQVVTEPC 145 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 20/173 (11%) Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-TKPECRSY-- 126 V+ Q I + + QG +IV+ + DGL PAL A + + VLT D T C + Sbjct: 124 VNAQNSQIEDMIAQGAKVLIVAPENSDGLGPALAEAKAKKIPVLTIDRTVTGTACSDFIA 183 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSP----TVTDQNQWVKEAKAKIAKEH 182 +I Q D+A +AKVA +P T N + + KAK + Sbjct: 184 FIGSNFYGQAQIAADDLAT--ATGSQAKVAILSGTPGNNVTTDRTNGFQDQVKAK----Y 237 Query: 183 PGWEIVTTQFGYNDAT-------KSLQTAEGILKAYSDLDAIIAPDANALPAA 228 P +V +Q G D T + LQ GI Y++ D + A+ AA Sbjct: 238 PNMTVVASQTGKFDQTDGQSVMAQMLQANPGITAVYAENDEMALGAIQAITAA 290 >UniRef50_UPI00016C365A Ribose transporter, periplasmic binding protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C365A Length = 328 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F+ GA++A E VD+ + P + Q++++ ++ QG + I+VS ++P G Sbjct: 44 FWDICDAGARKAAAEFNVDLLFRQPEQAFDAKAQMEIVESWAKQGLDGIVVSVINPKGQT 103 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYI 128 L R Q+ ++T D+D R Y+ Sbjct: 104 EDLTRIAQK-TPLVTMDNDADKTGRKCYV 131 >UniRef50_B5WJQ1 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Burkholderia sp. H160 RepID=B5WJQ1_9BURK Length = 160 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 +A +P + +FT GAQ+A KE V++ + P + + QV ++ F+ + + ++ Sbjct: 33 VALLPGVTDPFYFTMN-RGAQRAAKEENVELLFQVPKAWNTTEQVPILKAFIAKHPDVLL 91 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDS 117 VS V + LK A G++V+T D+ Sbjct: 92 VSPVDKQQMIGPLKEAADAGIKVITVDT 119 >UniRef50_A9D050 RbsB protein n=2 Tax=Alphaproteobacteria RepID=A9D050_9RHIZ Length = 344 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNA 87 R+A++P ++ + G G + E GV+V P + ++GQ+ +I + + Q +A Sbjct: 51 RVAYMPPATEFNYYIAIGEGIKAVAAEEGVEVFMLAPQSGADINGQMGMIQDVLTQDVDA 110 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 II P LK+A+ +G+ V+ +SD Sbjct: 111 IIFGTHDEFAAAPLLKQAVDKGMAVVMINSD 141 >UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Actinomycetales RepID=C2AKV1_TSUPA Length = 336 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 +DG E GQV I N V+QG I+++ S G+ A+K+A GV V+ D+ T+P Sbjct: 77 FDGDNE----GQVAAIENLVSQGVKGILITPNSSTGILAAIKKARDAGVVVIALDTATEP 132 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bac... 376 e-103 UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteob... 359 8e-98 UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding... 293 8e-78 UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-b... 289 1e-76 UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ... 288 3e-76 UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria Rep... 282 1e-74 UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostri... 275 1e-72 UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1... 274 4e-72 UniRef50_Q0S9A1 Possible sugar transporter, solute binding compo... 273 6e-72 UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostri... 271 3e-71 UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepI... 269 8e-71 UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protei... 264 3e-69 UniRef50_B7R620 Periplasmic binding proteins and sugar binding d... 263 5e-69 UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport... 262 9e-69 UniRef50_C8SFB0 ABC-type sugar transport system periplasmic comp... 259 1e-67 UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostri... 256 6e-67 UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotro... 255 2e-66 UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostri... 255 2e-66 UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostri... 254 3e-66 UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kri... 254 4e-66 UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding... 254 5e-66 UniRef50_C1YUW3 Monosaccharide ABC transporter substrate-binding... 250 5e-65 UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter... 248 2e-64 UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotro... 247 4e-64 UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-b... 244 4e-63 UniRef50_C7Q7X0 Rhamnose ABC transporter, periplasmic rhamnose-b... 243 7e-63 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 242 2e-62 UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional... 241 3e-62 UniRef50_Q0FYN9 Probable sugar ABC transporter, substrate-bindin... 240 5e-62 UniRef50_A7BAM4 Putative uncharacterized protein n=1 Tax=Actinom... 238 2e-61 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 237 4e-61 UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostri... 234 3e-60 UniRef50_A9BS22 Putative ABC transporter periplasmic sugar-bindi... 234 3e-60 UniRef50_A8RTG6 Putative uncharacterized protein n=1 Tax=Clostri... 234 4e-60 UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding... 233 6e-60 UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-bindin... 232 2e-59 UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria Re... 232 2e-59 UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bry... 231 2e-59 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 231 2e-59 UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter... 231 4e-59 UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostri... 229 8e-59 UniRef50_C6BA29 Rhamnose ABC transporter, periplasmic rhamnose-b... 229 9e-59 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 229 1e-58 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 229 1e-58 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_C5EPZ5 Putative uncharacterized protein n=1 Tax=Clostri... 226 1e-57 UniRef50_C9D206 ABC transporter, substrate binding protein n=2 T... 225 2e-57 UniRef50_Q1M9D2 Putative substrate-binding component of ABC tran... 222 1e-56 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 219 8e-56 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 219 9e-56 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 219 1e-55 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 217 4e-55 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 217 6e-55 UniRef50_A9H7R1 Putative exported protein n=2 Tax=Gluconacetobac... 216 8e-55 UniRef50_A9R0Y3 Carbohydrate uptake ABC transporter 2 (CUT2) fam... 215 1e-54 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 215 2e-54 UniRef50_A9KIX1 Putative sugar ABC transporter, substrate-bindin... 215 2e-54 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 214 3e-54 UniRef50_A6X767 Periplasmic binding protein/LacI transcriptional... 214 4e-54 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 214 4e-54 UniRef50_Q2RRZ3 Periplasmic binding protein/LacI transcriptional... 214 5e-54 UniRef50_A1SLY7 ABC sugar transporter, periplasmic ligand bindin... 213 7e-54 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 213 7e-54 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 212 1e-53 UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=... 212 2e-53 UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional... 211 2e-53 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 211 3e-53 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 210 4e-53 UniRef50_B8G8A7 ABC-type sugar transport system periplasmic comp... 209 1e-52 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 209 1e-52 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 209 1e-52 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 208 2e-52 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 207 3e-52 UniRef50_UPI0001C368C5 ABC sugar transporter, periplasmic bindin... 207 4e-52 UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional... 207 5e-52 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 207 6e-52 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 206 1e-51 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 205 2e-51 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 205 2e-51 UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Di... 204 4e-51 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 204 5e-51 UniRef50_C0E8U4 Putative uncharacterized protein n=1 Tax=Clostri... 202 2e-50 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 202 2e-50 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 200 4e-50 UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=... 200 4e-50 UniRef50_A3DI69 ABC-type sugar transport system periplasmic comp... 200 6e-50 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 200 6e-50 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 199 9e-50 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 199 1e-49 UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional... 199 2e-49 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 198 3e-49 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 197 4e-49 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 197 4e-49 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 197 5e-49 UniRef50_A5FYX5 ABC-type sugar transport system periplasmic comp... 197 5e-49 UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional... 197 6e-49 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 196 9e-49 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 195 1e-48 UniRef50_UPI0001973330 periplasmic binding protein/LacI transcri... 195 3e-48 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 194 4e-48 UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 T... 194 4e-48 UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional... 193 6e-48 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 193 9e-48 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 192 2e-47 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 190 4e-47 UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional... 190 5e-47 UniRef50_A9D042 Sugar ABC transporter, periplasmic sugar-binding... 189 1e-46 UniRef50_A6TS00 Periplasmic sugar-binding protein n=1 Tax=Alkali... 189 1e-46 UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional... 189 1e-46 UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional... 188 2e-46 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 188 2e-46 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 188 3e-46 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 186 8e-46 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 184 4e-45 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 183 6e-45 UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic com... 183 7e-45 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 182 1e-44 UniRef50_C7PZQ0 Sugar ABC transporter, periplasmic sugar-binding... 182 2e-44 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 182 2e-44 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 182 2e-44 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 181 3e-44 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 180 4e-44 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 180 6e-44 UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional... 180 6e-44 UniRef50_A1WIH3 Periplasmic binding protein/LacI transcriptional... 180 7e-44 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 179 1e-43 UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Br... 179 1e-43 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 179 1e-43 UniRef50_A9GIG1 ABC-type sugar transport system, periplasmic com... 178 2e-43 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 177 4e-43 UniRef50_B5I626 Putative uncharacterized protein n=1 Tax=Strepto... 177 7e-43 UniRef50_A7B0G4 Putative uncharacterized protein n=1 Tax=Ruminoc... 176 1e-42 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 176 1e-42 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 176 1e-42 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 175 1e-42 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 175 2e-42 UniRef50_B9Z651 Periplasmic binding protein/LacI transcriptional... 175 2e-42 UniRef50_Q92L85 Putative periplasmic binding ABC transporter n=1... 174 3e-42 UniRef50_A3K5X2 Putative periplasmic binding abc transporter pro... 174 4e-42 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 174 5e-42 UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales b... 174 5e-42 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 172 1e-41 UniRef50_A3DCF2 Sugar ABC transporter (Sugar-binding protein) n=... 172 2e-41 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 172 2e-41 UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax... 170 7e-41 UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5... 169 1e-40 UniRef50_C1F7H1 D-ribose-binding periplasmic protein, putative n... 167 4e-40 UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional... 167 4e-40 UniRef50_C5CYD2 Sugar ABC transporter n=17 Tax=Proteobacteria Re... 167 5e-40 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 167 6e-40 UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Ta... 164 4e-39 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 164 5e-39 UniRef50_C7LYX4 Periplasmic binding protein/LacI transcriptional... 163 1e-38 UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostri... 160 7e-38 UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional... 158 2e-37 UniRef50_Q1IJE4 ABC sugar transporter, periplasmic ligand bindin... 158 3e-37 Sequences not found previously or not previously below threshold: UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 216 8e-55 UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional... 210 6e-53 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 205 1e-51 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 199 1e-49 UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional... 198 2e-49 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 191 3e-47 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 190 4e-47 UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional... 190 6e-47 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 189 1e-46 UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 189 1e-46 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 189 1e-46 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 189 1e-46 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 189 1e-46 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 185 1e-45 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 185 2e-45 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 184 3e-45 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 184 6e-45 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 184 6e-45 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 183 7e-45 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 182 1e-44 UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and tra... 182 2e-44 UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional... 182 2e-44 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 182 2e-44 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 181 4e-44 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 180 6e-44 UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 180 7e-44 UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional... 179 2e-43 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 178 3e-43 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 177 4e-43 UniRef50_C6BZX1 Putative D-ribose-binding periplasmic protein n=... 177 5e-43 UniRef50_A1STY3 Transcriptional regulator, periplasmic binding p... 177 6e-43 UniRef50_B5K960 ABC transporter, periplasmic sugar binding prote... 177 6e-43 UniRef50_C5EI71 Predicted protein n=1 Tax=Clostridiales bacteriu... 176 8e-43 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 176 9e-43 UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=P... 176 1e-42 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 175 2e-42 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 174 4e-42 UniRef50_A8FI27 Sugar ABC superfamily ATP binding cassette trans... 174 4e-42 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 173 9e-42 UniRef50_Q2LS58 ABC-type sugar transport system, periplasmic com... 172 2e-41 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 171 3e-41 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 171 4e-41 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 171 4e-41 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 170 5e-41 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 169 1e-40 UniRef50_B9XKI8 Periplasmic binding protein/LacI transcriptional... 168 2e-40 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 168 3e-40 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 168 3e-40 UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding... 168 3e-40 UniRef50_A9KMJ5 Transcriptional regulator, LacI family n=1 Tax=C... 167 4e-40 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 167 6e-40 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 167 6e-40 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 167 6e-40 UniRef50_Q2RUM9 Ribose ABC transporter, periplasmic binding prot... 167 8e-40 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 167 8e-40 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 166 9e-40 UniRef50_A9EQW5 Ribose transporter, periplasmic binding protein ... 166 9e-40 UniRef50_A9KIC5 Periplasmic binding protein/LacI transcriptional... 166 1e-39 UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 166 1e-39 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 166 1e-39 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 166 1e-39 UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic com... 166 1e-39 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 165 2e-39 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 165 3e-39 UniRef50_C0CJS9 Putative uncharacterized protein n=1 Tax=Blautia... 163 5e-39 UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantel... 163 6e-39 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 163 6e-39 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 163 6e-39 UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional... 163 8e-39 UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Ba... 163 8e-39 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 163 1e-38 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 162 1e-38 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 162 1e-38 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 162 2e-38 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 162 2e-38 UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesor... 162 2e-38 UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enter... 162 2e-38 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 162 2e-38 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 161 3e-38 UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-bindin... 161 3e-38 UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein ... 161 4e-38 UniRef50_B9TLD6 D-allose-binding periplasmic protein, putative (... 160 5e-38 UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding... 160 5e-38 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 160 6e-38 UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clo... 160 7e-38 UniRef50_C0BEZ3 Putative uncharacterized protein n=1 Tax=Coproco... 160 8e-38 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 160 9e-38 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 160 1e-37 UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotro... 159 1e-37 UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional... 159 1e-37 UniRef50_A6BDJ9 Putative uncharacterized protein n=1 Tax=Dorea l... 158 2e-37 UniRef50_C7GDR0 Transcriptional regulator, LacI family n=1 Tax=R... 158 3e-37 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 158 3e-37 >UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bacteria RepID=LSRB_YERE8 Length = 344 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 291/344 (84%), Positives = 308/344 (89%), Gaps = 4/344 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMN----VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 M R KK+AL+ ALG A I+ + VQAAERIAFIPKLVGVGFFTSGG GA AGKEL Sbjct: 1 MKTPRLKKLALVCALGFACITFSAINAVQAAERIAFIPKLVGVGFFTSGGKGAVDAGKEL 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI+VSAVSPDGLCPALKRAMQRGV++LTWD Sbjct: 61 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWD 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SDTKPECRS YINQGTP QLG MLVDMAA QV KDKAKVAFFYSSPTVTDQNQWV EAK Sbjct: 121 SDTKPECRSVYINQGTPNQLGSMLVDMAANQVKKDKAKVAFFYSSPTVTDQNQWVNEAKK 180 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 KI +EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK Sbjct: 181 KIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 240 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 D VAIVGFSTPNVMRPYVERGTVKEFGLWDVV QGKISVYVA+ +LKKG + GDK+DI Sbjct: 241 RDNVAIVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDI 300 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 +G VEV+PNSVQGYD+EA G+GIVLLP+RVIF KENI KYDF Sbjct: 301 PNIGVVEVAPNSVQGYDHEAKGSGIVLLPQRVIFTKENIDKYDF 344 >UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteobacteria RepID=C9R4N9_AGGAD Length = 365 Score = 359 bits (922), Expect = 8e-98, Method: Composition-based stats. Identities = 261/335 (77%), Positives = 291/335 (86%), Gaps = 1/335 (0%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 F AL LG++ ++ Q+A+RIAFIPKLVGVGFFTSGG GA + GK L VDVTYDGP Sbjct: 32 FFVTALSVLLGLSVVA-TAQSADRIAFIPKLVGVGFFTSGGQGATEMGKTLSVDVTYDGP 90 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 TEPSV QVQLINNFVNQGYNAI+VSAVSPDGLC L+RAM+RGV+VLTWDSDTKPECRS Sbjct: 91 TEPSVPNQVQLINNFVNQGYNAIVVSAVSPDGLCSTLQRAMKRGVKVLTWDSDTKPECRS 150 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 +YINQGTP QLG MLVDMAA Q++K KAKVAFFYSSPTVTDQNQWVKEAKAKIAK+HP W Sbjct: 151 HYINQGTPEQLGSMLVDMAANQISKPKAKVAFFYSSPTVTDQNQWVKEAKAKIAKDHPEW 210 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGF 245 EIV TQFGYNDA KSLQTAE ILKAY DLDAIIAPDANALPAAAQAAENLK + V IVGF Sbjct: 211 EIVITQFGYNDAIKSLQTAESILKAYPDLDAIIAPDANALPAAAQAAENLKVNSVVIVGF 270 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 STPNVMRPYV+RG VK+FGLWDVVQQGKISV A+ALLK + GDKL+++G+G +EVS Sbjct: 271 STPNVMRPYVKRGKVKQFGLWDVVQQGKISVAAANALLKGEKLNVGDKLNVQGIGTIEVS 330 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 PN VQGY+YEADGNGI+LLPERV+F K+NI Y+F Sbjct: 331 PNKVQGYEYEADGNGIILLPERVVFTKDNIDNYNF 365 >UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Bacteria RepID=C1XTQ0_9DEIN Length = 312 Score = 293 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 181/319 (56%), Gaps = 16/319 (5%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVN 82 Q IA IPKLVG+ +F + GA++A ELG + + Y GPTE V Q++LI NF+ Sbjct: 8 AQKQITIAMIPKLVGIDYFNATEQGAKEAAAELGNIRLIYQGPTEGRVDKQIELIENFIT 67 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 + I V+A P + P L++A + G++V+TWD+D R + NQ T A +G LVD Sbjct: 68 AKVDVISVAANDPVAIAPVLEKARKAGIKVVTWDADAN--VRDVFCNQATFAGIGKALVD 125 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 ARQV K+ +VA SS T +QN W+ E K +AK++PG ++V T+ D + + Sbjct: 126 EMARQVGKE-GEVAIVTSSLTAPNQNAWIAEMKKVLAKDYPGLKVVDTKPSEEDQQLAFR 184 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVK 261 + +LKAY +L + A + A P AA+A + K KVA+VG STP M+P+++ G +K Sbjct: 185 VTQDLLKAYPNLKGVWALSSVAFPGAAEAVQQAGKAGKVAVVGLSTPKQMKPFMKAGVIK 244 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGI 321 LW+ + G +SVY A L++KG +K GDK+ K G V + D + Sbjct: 245 SVVLWNPIDLGYLSVYAAKQLVEKG-LKEGDKIVTKR-GTFTVQKD---------DKSLQ 293 Query: 322 VLLPERVIFNKENIGKYDF 340 +LL IF ENI K++F Sbjct: 294 ILLGPPFIFTPENIDKFNF 312 >UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=2 Tax=Dictyoglomus RepID=B8E1T5_DICTD Length = 334 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 105/339 (30%), Positives = 177/339 (52%), Gaps = 12/339 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + +F + LL L + Q I + K G FF + GAQ+A KELG+ V + Sbjct: 1 MKKFLIVLLLVLLIVLGTESFAQKKYVIGLVTKTAGNPFFEAVNKGAQEAAKELGITVIH 60 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P SV GQ+ +IN+ + Q +AI +SA PD L P ++A RG+ V+T+DS KP+ Sbjct: 61 QAPAASSVQGQIDIINSMIAQKVSAICISANDPDALVPVCRKAQLRGIPVVTFDSAVKPQ 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-E 181 R ++NQ Q+G + V + A+ +N + ++A ++ T+ +QN W+ K ++ K E Sbjct: 121 GRKLFVNQADMEQIGRIQVQLLAKMINYE-GEIAILSAASTMANQNTWIAWMKEELKKPE 179 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKV 240 + ++V +G + KS A G+ K+Y +L IIAP + AAA+A E+ + KV Sbjct: 180 YSKMKLVAIVYGDDIREKSYNEAMGLFKSYPNLKGIIAPTTVGIAAAARAIEDAGLSGKV 239 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGV 299 + G P+ M YV+RGT K F LW+ + G ++Y LL + G+K+++ + Sbjct: 240 QLTGLGLPSEMAEYVKRGTCKAFALWNPIDLGYATIYATYRLLNREIKGNVGEKVNLGRL 299 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 G+ + E +G +++L +F+ NI + Sbjct: 300 GERTIVD--------EGNGGRMIILGPPFVFDAANIDYW 330 >UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFA1_9LACT Length = 373 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 145/334 (43%), Positives = 200/334 (59%), Gaps = 12/334 (3%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A + ++ FIPK+ G FF SG GAQ+ K+ G V Y+G SV+ QV +IN Sbjct: 40 ATTQTANNGGKVVFIPKVTGNSFFESGNLGAQEMAKKEGFTVDYNGNPVASVANQVTIIN 99 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 N V G +I VS+V P GL ALK+A + G++V+TWDSD P+ RS ++QGTP QLG Sbjct: 100 NAVQTGAGSIAVSSVDPTGLDNALKQAQKAGLKVVTWDSDVSPDARSLMVSQGTPTQLGE 159 Query: 139 MLVDMAARQV-------NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT- 190 MLV M+ + KDK K A+ YSS TV DQN W K + I K +P WE V Sbjct: 160 MLVKMSVDALEKRGKDPKKDKIKYAWHYSSSTVQDQNSWQKVGEEYIKKNYPNWENVNES 219 Query: 191 -QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFST 247 + DA ++L + IL A+ D+D II D+ ALP QA +N K + + GFST Sbjct: 220 NYYSNQDAQQALNVGQSILSAHKDIDLIICNDSTALPGQLQAVQNAKLTKKDITVTGFST 279 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 PN ++ Y + ++E+GLWDV QG ++VY+A+ L K GDK+++ G+G+VEV N Sbjct: 280 PNSIKKYAKDDIIEEWGLWDVKVQGALAVYLANYLASGNQAKVGDKINVPGIGEVEVQNN 339 Query: 308 SVQGYDYEADGN-GIVLLPERVIFNKENIGKYDF 340 S+ +Y+ + G+VLLPER IF KEN+ KYDF Sbjct: 340 SILDPNYKDSPDSGVVLLPERTIFTKENMDKYDF 373 >UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria RepID=Q01NP6_SOLUE Length = 682 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 16/323 (4%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLI 77 A + IA +PK G +F S GA++A +ELGVD+ +DGPT + Q +++ Sbjct: 376 PAAAAKTGKRPVIAVMPKAKGDPYFISCKAGAEEAARELGVDLIWDGPTGLDAAKQNEVV 435 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 ++ +G +AI VS + G+ L++A +RG++VLTWD+D P+ R Y+INQ TP +G Sbjct: 436 EGWITRGVDAIAVSVENGPGISTVLRKARERGIKVLTWDADAAPDARDYFINQATPEGIG 495 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 L D AR + K + A + +QN W+ K ++A+++P ++VT + +D Sbjct: 496 NTLTDEGAR-LIGGKGEFAIVTGALGAANQNAWIDFIKKRVAEKYPQLKLVTIRPSDDDR 554 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 K+ + I+K Y ++ IIA A A+P AA+A + V ++G S PN+ + YV Sbjct: 555 DKAFSETQTIMKVYPNVKLIIAISAPAVPGAAEAVQQSGRKDVDVIGLSLPNLCKRYVHD 614 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 G + LW+ G ++VY A L++ +G +E+ Sbjct: 615 GVAQAVVLWNTKDLGYLTVYTAAKLVQGPLGS--GSFQGGRLGTIEIR------------ 660 Query: 318 GNGIVLLPERVIFNKENIGKYDF 340 V+L + IFNK NI +YDF Sbjct: 661 -GTEVILGKPFIFNKANIDQYDF 682 >UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2I7_9CLOT Length = 348 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 27/357 (7%) Query: 2 TLHRFKKIALLSALGIAAISM-----------------NVQAAERIAFIPKLVGVGFFTS 44 R + L++AL + ++ Q I PK + + Sbjct: 1 MKKRMLSMVLITALLLCGLAGCTTEKAGGASGDKKDEGKSQEKVTIGMCPKFTSDPYMVA 60 Query: 45 GGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKR 104 G GAQ+A ELG + ++GP ++ Q +I+ + + Y AI +SA D L PA+K Sbjct: 61 AGEGAQEACDELGYTLDFNGPVNADIAAQSDIIDQWTQKKYTAITISANDADALSPAMKA 120 Query: 105 AMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 A G+ WD+D + R ++NQ T +G +VDM + + T Sbjct: 121 AQDAGIYTSAWDADVNADSRELFLNQVTFEGMGKTMVDMMVEEAGS-SGDFLVVTAVLTA 179 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 +QN W++E K + +P +IV G D KS L+++ + + A A Sbjct: 180 PNQNAWIEEMKKYMEANYPDMKIVDILAGDEDLAKSRDVTLNYLRSHPETKGVFAVTGMA 239 Query: 225 LPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 P +A E L KVA+ G P++++ Y+++GT+ + LW G ++Y+A + Sbjct: 240 SPGVCEAIEQLDLVGKVAVTGLGVPSLIKDYLKKGTINQCCLWSPYDIGYGAMYLAKTQI 299 Query: 284 KKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 + Q + + ++ GIVLL + +IF K+N+ YDF Sbjct: 300 DGKLDE--------AKEQGYIEAGRLGKLEFIDKDKGIVLLGDPLIFTKDNVDDYDF 348 >UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C4W6_THENR Length = 337 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 191/346 (55%), Gaps = 21/346 (6%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-----VDV 60 FK++ L+ L + +++ + +I +PK G +F + GA+ A EL VD Sbjct: 2 FKRVLFLTFLFFSILALAIDPV-KIFMVPKFTGAPYFVATEKGARVAVNELKSLGLVVDF 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT- 119 Y GP+ + Q+++I++ + Q +A+IVS + L LK+A Q G++V+T+D+D Sbjct: 61 FYTGPSVANTEEQIRIISSLIEQKPDALIVSPNDAEALSSILKKARQNGIKVVTYDADVA 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 PE R ++NQ T +G LV++ A V + A++A + P +QN W+ K I Sbjct: 121 DPEARDVFVNQATFMSVGETLVELVAEGVGPE-ARIAIISADPNARNQNAWIDAMKKYIQ 179 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKA-YSDLDAIIAPDANALPAAAQAA-ENLKN 237 +++P +I+T ++GY+ +SLQ A+ I+ A Y ++DAI+AP + ALP AA+A + Sbjct: 180 EKYPKMKILTIKYGYDRPAESLQAAQDIINAYYPNIDAIVAPTSVALPMAAEAVLKAGLK 239 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 K+ + G +TPN +R YV+ G +K+F LW G +++YVA+AL + + Sbjct: 240 GKIFVTGLATPNDVRRYVKEGVIKKFALWSPKDLGYLALYVANALARNMVFEID------ 293 Query: 298 GVGQVEVSPNSVQGYDYEADGNG---IVLLPERVIFNKENIGKYDF 340 G+ V+ + Y + + G +++L +IF+ NI ++DF Sbjct: 294 --GERFVAGGKLGLYKIQKEVEGSKNVIVLGPPLIFDINNIDQFDF 337 >UniRef50_Q0S9A1 Possible sugar transporter, solute binding component n=24 Tax=Bacteria RepID=Q0S9A1_RHOSR Length = 358 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 108/330 (32%), Positives = 168/330 (50%), Gaps = 15/330 (4%) Query: 14 ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQ 73 A G A +Q ++AF+PK + + G + A +E G + GP + S S Q Sbjct: 41 ATGTANPDAPIQDGLQVAFLPKQLNNPYSDIEVGGGKTAVEEFGGEYKLVGPNDASASSQ 100 Query: 74 VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP 133 V IN + QG N I ++A P+ +CP+L +A G++V+T+DSD +CR +INQ T Sbjct: 101 VSYINTLIQQGQNVINIAANDPNAVCPSLNQARDAGIKVVTFDSDAAEDCRDLFINQATT 160 Query: 134 AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIVTTQ 191 +G L M + Q+ K+A ++P T+QN W++ KA++A E+ E+V T Sbjct: 161 QGVGETLAKMTSEQI-GGTGKIAVLSATPNATNQNAWIEVLKAELASKPEYQNIELVATV 219 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNV 250 +G +D KS Q +G+L+ Y DL AI++P + AAA+ + + + G TPN Sbjct: 220 YGNDDDQKSFQETQGLLQTYPDLKAIVSPTTVGIAAAARYISSSSYKGNIVLTGLGTPNQ 279 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 MR YV+ GTVKEF LWD G +S Y AL I G + + + Sbjct: 280 MREYVKNGTVKEFALWDPTNIGYLSAYAGAALASGQ---------ITGAEGQKFTAGKLG 330 Query: 311 GYDYEADGNGIVLLPERVIFNKENIGKYDF 340 +Y G V+L +F+ +I +Y+F Sbjct: 331 --EYTIGAGGEVVLGPPTVFDANSIDQYNF 358 >UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1T0_9CLOT Length = 368 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 167/314 (53%), Gaps = 15/314 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +IAFIP+L+G+ +F++ +G ++A ++LGV+ Y G T+ S + QV+++++ + QG NAI Sbjct: 68 KIAFIPQLIGIPYFSAMESGGKKAAEDLGVEFLYTGSTQASAAEQVKIMDSLIKQGVNAI 127 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +S + P +K+A + G++V T DSD R +Y+ Q LG L+D Q+ Sbjct: 128 SLSVLDSSSTNPYIKKAQEAGIKVYTSDSDAPDSTRDFYVAQALDKDLGTTLMDCLGEQM 187 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY-NDATKSLQTAEGI 207 KV T T+ N W+ K + +++P EIV ++ + ++L+ A+ + Sbjct: 188 -GGSGKVGIVSGESTATNLNTWIDYIKQRQEEKYPDIEIVDIRYTQGGSSEQALKQAQEL 246 Query: 208 LKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 + Y DL ++A ++ +P AQA + K +VA++G+ +P ++P++E G +K+ LW Sbjct: 247 MTRYPDLKGLVAVASSTIPGVAQAVQQEGKAGEVAVIGYGSPATVKPFIESGVMKQSVLW 306 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 + G ++V+ + + ++++ + N I+LL + Sbjct: 307 NAYDLGYLTVWAGKMAAEGKEFEATNQIEC------------IADPVTWDAENKILLLGQ 354 Query: 327 RVIFNKENIGKYDF 340 +I +K+N+ +DF Sbjct: 355 PLIIDKDNVNDFDF 368 >UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepID=C5EKT6_9FIRM Length = 326 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 136/325 (41%), Positives = 181/325 (55%), Gaps = 13/325 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +AFIPKL G FF S NGAQ+ KE G V Y G +V+ QV +INN + G +AI Sbjct: 2 TVAFIPKLTGNAFFESANNGAQEYSKEWGFTVDYQGSANAAVADQVNVINNAIASGVDAI 61 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA--- 145 VS+V GL AL A GV V+TWDSD R+ ++QGTP LG MLVDM A Sbjct: 62 CVSSVDATGLDSALTEAKDAGVTVVTWDSDVSDTARTLMVSQGTPDLLGKMLVDMGADSL 121 Query: 146 ----RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT--QFGYNDATK 199 + V D K + YS TV DQN W +A I + P WE V + DA K Sbjct: 122 TNRGKDVKADTIKYCWHYSQATVADQNSWQVAGEAYIKENFPNWENVAPDNYYSEQDAEK 181 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFSTPNVMRPYVER 257 ++ IL+A+SD+D II D+ ALP +AA+N D V I GF++P ++ Y Sbjct: 182 AVSIGASILEAHSDIDLIICNDSTALPGQCKAAQNKGLTKDDVTITGFASPMSIKDYCAA 241 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS--VQGYDYE 315 G ++++GLWD QG + Y+A L + GDK+DI +G+VEV PN V+G Sbjct: 242 GVIEQWGLWDCGVQGAMGCYLAAYLAAGNEVHVGDKIDIPSIGEVEVMPNDCLVEGASTA 301 Query: 316 ADGNGIVLLPERVIFNKENIGKYDF 340 NG+VLLPER +FN +N+ Y+F Sbjct: 302 EVNNGVVLLPERTVFNADNMNDYNF 326 >UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protein n=3 Tax=Acetobacteraceae RepID=A9HG18_GLUDA Length = 368 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 103/330 (31%), Positives = 167/330 (50%), Gaps = 17/330 (5%) Query: 9 IALLSALGIAAISMNVQAAE--RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 IA L A G++ ++ AE +I F+PK++G+ +F++ G + G+ + Y GPT Sbjct: 49 IAALVAAGLSCMAPAQGRAETFQIGFVPKVIGIPYFSAMQQGFLKGGRAFDARIVYQGPT 108 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 SV+ Q Q++ + +N+ +A+ V+A SP L A +RGV + DS + Sbjct: 109 TSSVAAQAQIVQSLINRKLDAVAVAANSPTALEAQAVHARERGVIFASTDSQVDGDAVDL 168 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 + Q T L LVD A Q+ D ++AF PT T+ N W+ K+ +A + P ++ Sbjct: 169 RVMQATDEALAHTLVDQLATQI-PDGGQIAFVSGGPTATNLNMWISLMKSYLAAKFPKFQ 227 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGF 245 +V+ Q+ D +K+ + IL AY L II + A P AAQA + K+AI G Sbjct: 228 LVSVQYAGEDISKATEITSQILSAYPGLKGIIGVNTTATPGAAQAVLQAGLAGKIAITGI 287 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 PN +RPYV GTVK LW+ V G ++V+ LL+ ++ + + G+G + Sbjct: 288 DDPNTIRPYVLNGTVKSAVLWNPVDLGYLTVWGLTQLLQHKPLQVQNP--VPGLGTITYD 345 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENI 335 P + +LL + ++F KENI Sbjct: 346 PKT-----------KTLLLGQPMVFTKENI 364 >UniRef50_B7R620 Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=3 Tax=Bacteria RepID=B7R620_9THEO Length = 344 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 17/314 (5%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 + + K +F G Q+ K+ GV GP++ + Q+Q++ + + Q +A+ Sbjct: 46 KFITVVKSTAFNWFKRMETGIQEFSKDTGVKAVMQGPSKADAALQLQVVEDAIAQKPDAL 105 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +V P+ L PALK+A+++G+ V+T ++ + + +Y + A G L+D A+++ Sbjct: 106 LVVPFKPETLEPALKKALEQGIVVITHEA-SNAQNVTYDVEAFDNAAYGRHLMDELAKRM 164 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF-GYNDATKSLQTAEGI 207 N + K F S T T N+WV A A +++P + + T++ +D K+ Q + + Sbjct: 165 NYE-GKYVVFVGSLTSTTHNEWVDAAIAWQKEKYPKMQFIGTKYETNDDVQKAYQIMKDL 223 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 LK + D+ + A + A QA E K+A+VG S P+ ++ G + W Sbjct: 224 LKTHPDIKGVQGSSAVDVVGAGQAIEEAGLAGKIAVVGTSIPSYAGDLLKSGAISLISCW 283 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 D + G VA +L+ ++ G L + G ++++ ++ Sbjct: 284 DPAKAGYAMNKVALMVLQGQKIEDGMDLGVPGYEKIKLV-------------GKVIYGSA 330 Query: 327 RVIFNKENIGKYDF 340 + +K+N+ +Y F Sbjct: 331 WIDIDKDNMDQYPF 344 >UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTL4_ALIAD Length = 352 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 121/314 (38%), Positives = 176/314 (56%), Gaps = 17/314 (5%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 ++AFIPK +G+ +FT GAQ +L + +TY+GPT+ S + QV +IN++V QGYN I Sbjct: 54 KVAFIPKEIGIPYFTGADQGAQSVAPKLHIQLTYNGPTQASAADQVSMINSYVAQGYNVI 113 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 VSA P L PAL+ AM+RGV+V+TWDSD P R ++++Q T +G LV + A Sbjct: 114 AVSANDPTSLAPALESAMRRGVKVITWDSDVIPSARQFFVDQATAQGIGTTLVQITAEHF 173 Query: 149 NKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 K +V S+PT +QN W+ K I ++ IVT Q+ L AE + Sbjct: 174 KSQKNVEVGILSSTPTNPNQNAWIAVMKQAIQSKYKNLHIVTIQYDQEQPDVGLTAAENM 233 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L+AY + AII+PD+ +PAAA+A E L KV + G + P M+ YV GTV+EF LW Sbjct: 234 LRAYPQMKAIISPDSVGVPAAAEAVEKLGLKGKVFVTGLADPIQMKQYVNDGTVQEFVLW 293 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 DV + G +++YVA A++ + + G + + VQ N +VLL Sbjct: 294 DVPKLGALTMYVARAVVDG-------TMPVNGTFKCALGSFKVQ--------NRVVLLGN 338 Query: 327 RVIFNKENIGKYDF 340 IFNK NI ++ Sbjct: 339 PTIFNKSNINNANY 352 >UniRef50_C8SFB0 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SFB0_9RHIZ Length = 328 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 93/341 (27%), Positives = 167/341 (48%), Gaps = 14/341 (4%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M H K +A + A + + ++AF+P+L+G+ +F + G +A K+LGVD Sbjct: 1 MLSHFKKVLAASALSLAVATAAHAADKHKVAFVPQLIGIPYFNAMEAGGNRAAKDLGVDF 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 Y GP + + Q+Q++ N ++QG AI VS + + P ++ A +G+++ T DSD Sbjct: 61 IYSGPVDTNPVDQLQIVQNLIDQGVEAISVSVLDASSIAPVVESAKAKGIKLFTSDSDAP 120 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 R+ Y+ Q T LG +VD ++V +D A + T ++ N W+ + + A Sbjct: 121 DSGRAVYVAQATDEGLGTTIVDELVKRVGED-ATIGIVSGEATASNLNAWIGFMQKEAAA 179 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE-NLKNDK 239 ++P +++ QF A ++ Q + ++ A D+ AIIA ++ P AQA E K Sbjct: 180 KYPKLKLLAPQFAGGTAERAAQISGDLMAANPDIKAIIAVASSTCPGVAQAIETAGKIGS 239 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V G+ +PN R Y++ G LWD Q G ++V+ L+ + + +K+ Sbjct: 240 VIGAGYCSPNTARAYLKSGAFGFTVLWDPEQLGYLTVWAGKQLIDGKAFEAENKI----- 294 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 ++ GI+LL +F K+N+ K++F Sbjct: 295 -------AGLEKPVTYDAAKGILLLGPPAVFTKDNVDKFNF 328 >UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NES6_EUBSP Length = 350 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 17/317 (5%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 ++ I K +F G +Q K+ G++V+ P + Q+ ++ + + QG Sbjct: 49 EEYQVVMIVKQSDS-WFDDMTTGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGV 107 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +AI + PD L P +++A + G+ V+T ++ E + + G + + A Sbjct: 108 DAICIVPNDPDALVPTIEKAKESGIVVVTHEAPGIAENVDLDVEAFVNEEFGKLFGEKLA 167 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF--GYNDATKSLQT 203 + ++ K + A F T+ W K A I + +P E VT + N + Sbjct: 168 KSMD-GKGQYAGFVGGLTMETHMAWYKAAIEYIKENYPDMECVTEEPYEDGNSVDGAHDK 226 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEF 263 ILKAY D+ + A+ E K D V++V + P++ Y+E G++K Sbjct: 227 TLEILKAYPDIKGLFDCSAHGGGICEALQEKNKTDDVSVVSLALPSMSATYLEDGSMKAG 286 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 W G + Y A L ++TG L I G ++V +G+ Sbjct: 287 LAWRPADAGYATCYAAYLLASGQKVETGTDLKITGYEDIQVK-------------DGVAY 333 Query: 324 LPERVIFNKENIGKYDF 340 + F+ +NI Y F Sbjct: 334 GNAPLEFSADNINDYKF 350 >UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G524_ABIDE Length = 370 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 127/326 (38%), Gaps = 17/326 (5%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 A+ + A ++ I K +F G +Q K+ G++V+ P + Q+ + Sbjct: 60 TASSTSADPADYKVVMIVKQSDS-WFDDMSTGVEQLKKDTGLNVSVQVPETGDAASQISI 118 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + N + QG NAI V P+ L P +++A + G+ V+T ++ + + Sbjct: 119 MENLIAQGVNAICVVPNDPEALIPTIEKARKAGIVVVTHEAPGIAANVDLDVEAFVNEEF 178 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF--GY 194 G + + A+ + K + F T+ +W A A I++++P + +T + Sbjct: 179 GKLFGENLAKAM-GGKGEFVGFVGGLTMETHMKWYNAAIAYISEKYPEMKCLTKEPYEDG 237 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 N + ILKAY D+ A+ E K + +V + P++ Y Sbjct: 238 NSVDGAYNKTLEILKAYPDIKGFFDCSAHGGGICQALQEKGKAGDIKVVSLALPSMSATY 297 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 ++ G++ W G + Y A L + TG L I G ++V N Sbjct: 298 LKDGSMSHGQAWRPADAGYATCYAAYLLASGQGVSTGTDLKITGYDNIKVDGN------- 350 Query: 315 EADGNGIVLLPERVIFNKENIGKYDF 340 I + F +NI Y F Sbjct: 351 ------IAYGNAPLEFTADNIDDYGF 370 >UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWS5_9CLOT Length = 370 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 129/326 (39%), Positives = 187/326 (57%), Gaps = 14/326 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 +I F+PK+ G FF S +GAQ+ K++G ++ YDG +V+ QV +INN +NQG + Sbjct: 45 QIVFVPKVTGNSFFESANDGAQEFAKKVGGFEIKYDGSATAAVADQVTIINNAINQGADG 104 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I VS+V GL +K+AM G+ V+TWDSD + R ++QG+P LG L+ ++ Sbjct: 105 IAVSSVDATGLDEVMKKAMDAGLAVVTWDSDVSADARQIMVSQGSPEILGEFLLQLSENA 164 Query: 148 VN-------KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT--QFGYNDAT 198 + KD K + YS TVTDQN W A+ I++++P WE V + DA Sbjct: 165 LKASGLDPAKDAVKYCWHYSQATVTDQNSWHDAAEKMISEKYPNWENVAPDNYYSEQDAE 224 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DKVAIVGFSTPNVMRPYVE 256 K++ E +L A+ D++ +I D+ ALP AQAA+NL VAI GF+TPN M+ + Sbjct: 225 KAISVGESVLTAHEDINLVICCDSTALPGQAQAAQNLGKTTKDVAITGFATPNAMKDFCT 284 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS--VQGYDY 314 G V +GLWD QG I+ Y+A L + GDK+DI +G+VE+ NS Sbjct: 285 AGVVNNWGLWDTGLQGSIANYMAYYLASGNKVTIGDKVDIPEIGEVEIVNNSEITGDDAD 344 Query: 315 EADGNGIVLLPERVIFNKENIGKYDF 340 DG+G+V LPER FN +N+ YDF Sbjct: 345 NVDGSGVVFLPERAEFNADNMDDYDF 370 >UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5N5_9CLOT Length = 353 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 17/317 (5%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 ++ + K +F G +Q K+ G++V+ P + Q+ ++ + + QG Sbjct: 52 EEYQVVMVVKQSDS-WFDDMATGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGV 110 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +AI V P+ L P +++A + G+ V+T ++ + + G + + A Sbjct: 111 DAICVVPNDPEALVPTIEKARESGIVVVTHEAPGIAGDVDLDVEAFVNEEFGQLFGEKLA 170 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF--GYNDATKSLQT 203 ++ K K A F T+ W K A A I + +P E V+ + N + Sbjct: 171 SAMD-GKGKYAGFVGGLTMETHMAWYKAAVAYIEENYPDMECVSKEPYEDGNSIDGAHDK 229 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEF 263 A ILKAY D+ A E K D + +V + P++ Y+E G++ Sbjct: 230 ALEILKAYPDIKGFFDCSAQGGGICETLQEKNKTDDIKVVSLALPSMSATYLEDGSMAAG 289 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 W G + Y A L ++TG L I G ++EV +G+ Sbjct: 290 LAWRPADAGYATCYAAYLLASGQKVETGTDLKITGYEEMEVK-------------DGVAY 336 Query: 324 LPERVIFNKENIGKYDF 340 + F+ +NI Y+F Sbjct: 337 GNAPLEFSSDNINDYNF 353 >UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TWQ1_YERKR Length = 329 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 21/345 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELG 57 M +H +A+L + ++ AA+ + IPK + +F G ++A K+ G Sbjct: 1 MKIHNKLTLAVLLSFSALCTTVPAYAADETYSMVGIPK-LRSAWFNDYETGLKKAEKDFG 59 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 + + P QV +I + ++QG NA++V + + P K+A + + V+T +S Sbjct: 60 IKTYFQAPASADEQQQVSVIRDSISQGNNALLVVPNNASSVEPVFKQARAQNIVVITHES 119 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + E Y + + G ++D A+ +K + A + S TV N W A + Sbjct: 120 VNQKEA-DYDVEMIENQKFGSYMMDQFAKHA-GEKGEFAIYVGSLTVPAHNIWADAAIKR 177 Query: 178 IAKEHPGWEIVTTQFG-YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENL 235 + +++P ++V +F D S Q ++ Y DL +++ + P A QA E Sbjct: 178 MKEKYPQMKLVAERFPVSEDRNASRQKTLELISTYPDLKGVLSFGSQGAPGAGQALREKG 237 Query: 236 KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 K+ ++G ++P ++E G + E LW + Y+A +L + L+ Sbjct: 238 LVGKLTVIGTTSPKESARFLEDGAITESILWSPGEASYAMAYIAKMVLDGKRDQIKQGLE 297 Query: 296 IKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 + G+G+ E++ + ++ + + KEN KYDF Sbjct: 298 VPGLGKPEINGMN-------------IIFDKPLTVTKENYKKYDF 329 >UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FB6 Length = 337 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 14/326 (4%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ 75 +S + +IAF+PK+ G+ +F + G A + LG + P + Q Sbjct: 25 CSPVLSDSAPEPAKIAFVPKIGGIPYFDAMNAGGMLASRRLGAKWSLHAPASLDPAAQTA 84 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 ++ + + + I V+ P L P + A ++G+ VLT D+D R ++NQ T Sbjct: 85 ILRQLIAERVDVIAVAPNDPAELAPTIAEAREKGIHVLTTDTDAADSQREVFVNQTTADG 144 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 +G LVD ++ + A + N W++ K A+ +P ++V T + Sbjct: 145 IGSALVDSLMKK-TDGAGEYAIVSCGRAAANLNSWIEAEKTYAAQRYPQAKLVETVYAGE 203 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPY 254 D T + + A+ IL + L +I A P A+A + K +V VG TP M+PY Sbjct: 204 DTTTATKLAKEILNRHPKLTGMIGQCTTATPGIARAVRDQQKIGQVFTVGTGTPQTMKPY 263 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 + G+ LW+V G ++ + A+ L TG L K E+ + Sbjct: 264 LVDGSCSMTVLWNVESLGYLTAWTAEQLA------TGTPLRPKNNVSPEL------PAVH 311 Query: 315 EADGNGIVLLPERVIFNKENIGKYDF 340 VLL + ++ + N+ ++ + Sbjct: 312 YDAATRTVLLGDPLLITQNNVDQFKY 337 >UniRef50_C1YUW3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUW3_NOCDA Length = 355 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 92/327 (28%), Positives = 161/327 (49%), Gaps = 16/327 (4%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ 75 G A + +I F+PK + FF G +A +E+G T G TE + QV+ Sbjct: 43 GTADPDARIPEGLKIDFLPKQLNNPFFEIVNQGGAEAVEEVGGTATERGGTEATADSQVE 102 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 +N G + I+++A PD +CPAL A G ++ +DSD C ++NQ + Sbjct: 103 YVNAASQAGSDVIVIAANDPDAVCPALNEARDNGAAIVGYDSDAN--CTDVFVNQSSTEL 160 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEHPGWEIVTTQFGY 194 +G LV+M A + + A ++P T+QN W+ + +A +E+ E+V T +G Sbjct: 161 IGRTLVEMIAEDLGGE-GTFAVLSATPNATNQNAWIAAMEEVLAEEEYADLELVETVYGN 219 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ-AAENLKNDKVAIVGFSTPNVMRP 253 +D +S Q +G+++++ DLD +++P + AAA+ +++ +VA+ G TPN MR Sbjct: 220 DDDLESFQEMQGLMQSHPDLDGVVSPTTVGIAAAARYVSDSEYRGEVAVTGLGTPNQMRE 279 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 +V GTV F LW+ + G ++ Y AL I G + + + Sbjct: 280 FVHDGTVGRFALWNPLDLGYLAGYTGAALRAGQ---------ITGAEGETFTAGRLGEFT 330 Query: 314 YEADGNGIVLLPERVIFNKENIGKYDF 340 +E + G ++L +F+ N+ +DF Sbjct: 331 FETE--GEIVLGPPQVFDAGNVDDFDF 355 >UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Bacteria RepID=C2KTG0_9ACTO Length = 349 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 136/351 (38%), Gaps = 23/351 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAE-------RIAFIPKLVGVGFFTSGGNGAQQAG 53 + + +A SAL S +A+ RIA +PK +F G ++ Sbjct: 11 IAIPVMAALACGSALLTGCESGKSTSADGKKSDKVRIAIVPKDATNPWFVRMEEGVKKYA 70 Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 + G+DV GP + Q Q+I + + Q +AI V V P L P LK A G+ V+ Sbjct: 71 ADSGLDVFQRGPAATDATQQAQVIRDLIAQKVSAIGVVPVDPGALEPVLKEARDAGIVVI 130 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKE 173 T + + Y I + GG ++D A + ++ T N+W Sbjct: 131 THE-GASQKNTQYDIEAFSNEAYGGFIMDNLADGMGQE-GVYTTMVGHITNASHNEWADS 188 Query: 174 AKAKIAKEHPGWEIVTTQF---GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ 230 +++P +++ Q + A + Q A+ +LKA+ ++ I + P A+ Sbjct: 189 GVKHQKEKYPKMKLLEAQPRVESGDTAEGAYQAAKEVLKAHPEVRGIFGTSSFDAPGVAR 248 Query: 231 AAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 A E + KV G P + ++ GTV LWD G +A +L + Sbjct: 249 AIEEMGLKGKVFTSGTGMPQANKEILKNGTVHALTLWDPADAGYAMAALAKKVLDGEKIS 308 Query: 290 TGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 G L +KG + D + ++ + +N+ ++F Sbjct: 309 EGLDLGVKGYE----------NMKFNKDNDKVLEGKGWIAITSDNVDDFNF 349 >UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G253_ABIDE Length = 376 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 83/317 (26%), Positives = 135/317 (42%), Gaps = 17/317 (5%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 IA + K +F G + GK V+V GP + QVQL+ + VNQG +A+ Sbjct: 72 TIAVVVKDGTSDWFKRMQVGVDEFGKAKTVNVIQKGPANADAASQVQLVEDMVNQGVDAL 131 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 V + P L L++AM++G+ V++ ++ + + Y + T G ++ A+ + Sbjct: 132 CVIPIDPGALESVLQKAMEKGIVVVSHEA-SDLKNTLYDVEAFTAEDFGNTMMQELAKAM 190 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI----VTTQFGYNDATKSLQTA 204 + + A + T T ++ K A + + + V + + + A Sbjct: 191 -GESGQYAQMVAYTTSTTHMEYSKAEYAYQKENYKNMSLINDTVPSAESAEKVNTAYEKA 249 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEF 263 + +LKA +L + + AQA E L DKV+IVG TPN R Y+ GT+ Sbjct: 250 KELLKANPELKGFTGAASVDILGEAQATEELGLTDKVSIVGVGTPNATRDYINSGTISAV 309 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 LWD G +A +L +K G L KG V + S N +L Sbjct: 310 CLWDPAAAGYAMCNLAYMILAGEEIKEGINLGQKGYESVTIQKGS----------NRCIL 359 Query: 324 LPERVIFNKENIGKYDF 340 +I K+NI YDF Sbjct: 360 GNAPLILTKDNINDYDF 376 >UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=42 Tax=Proteobacteria RepID=A1WJR0_VEREI Length = 341 Score = 244 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 108/341 (31%), Positives = 185/341 (54%), Gaps = 17/341 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDV 60 TL AL + AA++ AA++IA + K +G GFF + GAQ+A KE+ +++ Sbjct: 10 TLRATALAALQAVAWGAALASPALAADKIAVVVKSLGNGFFDAVNQGAQEAAKEIKNIEI 69 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 Y GP + + GQ+++IN ++Q AI++SA PD L P+LKRAM RG++VL++DS + Sbjct: 70 IYTGPAKSTAEGQIEIINALISQKVAAIVISANDPDALAPSLKRAMGRGIKVLSFDSGVR 129 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + R +++ + A +G LV +Q D ++A S+ T+QN W++E + +A+ Sbjct: 130 KDGRMMHLSPSSNALIGEKLV-QLTQQAIGDSGEIAVVSSTAQATNQNIWIEEIRKVLAR 188 Query: 181 -EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-D 238 + G ++V+ +G + KS + +G+ K+Y +L AIIAP + AAA+A ++ K Sbjct: 189 PAYKGLKLVSVAYGDDQIDKSYRETQGLFKSYPNLKAIIAPTTIGVAAAAKAVQDEKKVG 248 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIK 297 V + G P+ M +V+ G VK F +W+ + G S+ A L+ + K GDK+ + Sbjct: 249 SVYVTGLGLPSEMAGHVKNGAVKSFAIWNPIDLGYSSIQAASQLIAGKFTGKPGDKVSLG 308 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 VG V + NS + E ++ N+ K+ Sbjct: 309 RVGSVVLDANS------------EAAMAEPFTYDASNVEKF 337 >UniRef50_C7Q7X0 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=10 Tax=Actinomycetales RepID=C7Q7X0_CATAD Length = 373 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 107/328 (32%), Positives = 165/328 (50%), Gaps = 15/328 (4%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQV 74 G A S V+ +AF+PK V +F G A LG G T +GQV Sbjct: 58 GSANPSAAVKKGLTVAFLPKQVNNPYFNISDAGGNTALTALGESYKEVGTTSATDTAGQV 117 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 +N Q +AI VSA P LC ALK+AM G++V+T+DSDT P CR +++Q + Sbjct: 118 SYVNTLTQQHVSAIAVSAQDPGALCTALKQAMSAGIKVVTYDSDTDPGCRQAFVSQASSE 177 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFG 193 LG VD+ +++N ++A ++ T T+QN W+ + ++ K + ++V +G Sbjct: 178 ALGRSEVDLLGKELNY-TGQIAILSAAQTATNQNAWIGYMQDELKKPQFANMKLVKIAYG 236 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMR 252 +DA S Q +G+L+ Y DL II+P + AAAQ + + KV + G TPN MR Sbjct: 237 NDDAQMSFQQTQGLLQQYPDLKGIISPTTVGIKAAAQYLDGSQYKGKVLLTGLGTPNDMR 296 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 YV+ GTVK F LWD + G+++ Y A AL I G + + Sbjct: 297 SYVQDGTVKAFELWDPGKLGQLAAYAAVALASGQ---------ISGAQGQSFTAGPMG-- 345 Query: 313 DYEADGNGIVLLPERVIFNKENIGKYDF 340 ++ G++ L +F+ NIG+++F Sbjct: 346 NFTLGAQGVITLGAPTVFDASNIGQFNF 373 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 88/333 (26%), Positives = 141/333 (42%), Gaps = 26/333 (7%) Query: 7 KKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 K + LS + I +S+ A I I K V +++ G + AGK LGVD + P Sbjct: 3 KLLVFLSVVLITGLSL----ALTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKFFVPQ 57 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + ++ Q+Q++ +F+ +G + I ++ P + P +K+A++ G+ V+T D+D+ R Sbjct: 58 KEDINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTDSPDSGRYV 117 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 YI GT G + +++ K KV S T + Q ++ K IA E Sbjct: 118 YI--GTDNYQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIADSE--IE 173 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGF 245 IV D +++ AE L A+ DLDA A P+ A +N KV IV F Sbjct: 174 IVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGKVGKVKIVCF 233 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 T + YV+ G ++ G +SV V + K G T L +V V Sbjct: 234 DTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLYLMNKIGVQNTLMMLP-----KVTVD 288 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 D D + EN+ +Y Sbjct: 289 GKVDYVIDTGVD-----------VVTPENLDEY 310 >UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F740_THELT Length = 337 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 136/347 (39%), Gaps = 17/347 (4%) Query: 1 MTLHRFKKIALLSALGIAA------ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK 54 M + +++L+ +G + + + + K + +F G +Q GK Sbjct: 1 MLKRLYLLVSVLALVGAMLLLPNGEVFATSKGNFVMGTVVKSIAFNWFMRMEEGVKQFGK 60 Query: 55 ELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 + GV GP+ + QV +I + QG +AII K+AM G+ V+T Sbjct: 61 DYGVTAFMQGPSVADSAQQVAIIEQLIAQGVDAIINVPYGVQENDLVQKQAMDSGIIVVT 120 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 ++ T Y + G ++ A+++ + + F S T N+W A Sbjct: 121 HEAAT-ARYAHYDVEAFDNKSYGEEMMRQLAQRMGYE-GEYVQFVGSLTNASHNEWQDAA 178 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K P + + D + T + +LK Y ++ ++ A + +A + Sbjct: 179 RVYQEKNFPKMKCIGKFESREDIEAAYTTMKDLLKKYPNIKGVLGSAAGDVVGVGRAVQE 238 Query: 235 LK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 +DK+ +VG S + ++ G V WD G + VA LLK ++ G Sbjct: 239 AGLSDKIVVVGTSIVSYAGELLKTGAVDLAMCWDPALAGYAANVVAYKLLKGEKIEEGMD 298 Query: 294 LDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 L + G ++ + N G ++ ++ + N+ KY+F Sbjct: 299 LGVPGYTKIHIVKNEY--------GVPVIYGQGWILIDASNMDKYNF 337 >UniRef50_Q0FYN9 Probable sugar ABC transporter, substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYN9_9RHIZ Length = 367 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 16/311 (5%) Query: 33 IPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVS 91 IPKLVGVG+F S +G QQA +ELG + + DGPT ++ Q+ ++N++ G + I+ + Sbjct: 70 IPKLVGVGYFASTASGMQQAVEELGNITINTDGPTRANIDEQITFVDNYITSGVDGILFA 129 Query: 92 AVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD 151 A P + P LKRA+ G+ V+ +D+D + + R +++NQ P + ++D A ++ ++ Sbjct: 130 ANDPVAIAPVLKRALDAGINVVGYDADAEADARQWFVNQALPNGVAKSMMDQLASEIGEE 189 Query: 152 KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY 211 A S+ T +Q +W+ E +A K +P + T D S A+ ++ Y Sbjct: 190 -GSFAIVTSTFTTPNQARWISEMQAYTEKCYPNLTFLETVEAQEDNILSFNQAQTLINKY 248 Query: 212 SD-LDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 D L+ I+ + A PAA++A + KV++VG + PN M+PY+ +K LW+ V Sbjct: 249 GDELNGILGMTSVATPAASEAVQQNGLCGKVSVVGLALPNAMKPYINGDCIKSTILWNTV 308 Query: 270 QQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVI 329 G + V + ++ +G+++V S VLL + Sbjct: 309 DLGYAAAQVMRQVADGTLEPGATTVNAGRLGELQVVNQS------------QVLLGAPKV 356 Query: 330 FNKENIGKYDF 340 F KE+I +DF Sbjct: 357 FTKEDINDFDF 367 >UniRef50_A7BAM4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAM4_9ACTO Length = 352 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 112/320 (35%), Positives = 171/320 (53%), Gaps = 18/320 (5%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQG 84 +++ I FIPK + F G + A E+G +V GP E S S QV IN+ V G Sbjct: 46 SSQSITFIPKQLNNPFSDVMLGGGKNAAGEIGFAEVNVVGPLEASSSSQVSFINSEVQAG 105 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 N ++++A PD +CPAL+ A + G +V+T+DSD+ +CR +INQ Q+ ++DM Sbjct: 106 TNVLVIAANDPDAVCPALQDARKAGTKVVTFDSDSAADCRDLFINQVESKQVAITMLDMV 165 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA--KEHPGWEIVTTQFGYNDATKSLQ 202 + Q+ KVA ++ +QN W+K + +IA ++ G EIV +G +D TKS Q Sbjct: 166 SDQI-GGSGKVAILSATANAANQNAWIKFMEDEIASNDKYKGIEIVAKVYGDDDDTKSFQ 224 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVK 261 A+G+L+A+ DL+AI++P + A A+ KV + G PN MR +V+ GTVK Sbjct: 225 EAQGLLQAHPDLNAIVSPTTVGIAATARYLSTSDYKGKVFLTGLGLPNEMRSFVKDGTVK 284 Query: 262 EFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNG 320 EF LWD Q G ++ Y AL + G+K +G+ + N Sbjct: 285 EFALWDPAQLGYVAAYAGAALDSGAIKGEVGEKFTAGNLGERTIGENK------------ 332 Query: 321 IVLLPERVIFNKENIGKYDF 340 V++ + V FN +NI KYDF Sbjct: 333 TVVVGDPVRFNADNIDKYDF 352 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 5/295 (1%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQL 76 A S N +I + K F+ S GA++AG+ELGV+V + GP E + QV + Sbjct: 28 AGKSANSGDKIKIELVSKGYQHEFWRSVEAGAKKAGEELGVEVNFIGPEKETEIGKQVGM 87 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + N +N+ +A+ ++A+ PD L K+AM + V+T+DS+ K + S +I T ++ Sbjct: 88 VENAINKKVSALGIAALDPDALAVVAKKAMDAKIPVVTFDSNVKGDITSSFI--ATDNKV 145 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 G + ++ K KVA +P T + + +AK +P +I+ TQF D Sbjct: 146 AGAMAGEQLAKLINGKGKVAIVSHNPGTTTAIEREAGFREALAK-YPDIKILNTQFSDGD 204 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYV 255 +K+L I+ A D+ I + ++ A+ E KV +VG + + ++ Sbjct: 205 KSKALAITLDIINANPDIAGIYGTNEPSIFGIAKGVEEKGLTGKVVLVGIDSSEDLAKFL 264 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 E+G + + D G +V L K ++ V + ++ + Sbjct: 265 EKGVISGLVIQDPYNMGYQTVQQLYKLSKGEKVEKRIDTGAILVTKENINNPDIT 319 >UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PC03_9FIRM Length = 385 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 15/319 (4%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 A + K + F G ++ + +G + Y G EP+ ++++I + QG + Sbjct: 73 APTYVMVSKTLSDPVFIDMYIGFREFCESIGANCMYRGSDEPTAEKEIEIITQLMAQGVD 132 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 + V A D L P L +AM +G+ V+T+DS P+ R ++ Q + +G + A Sbjct: 133 GLAVIAADFDALEPVLTQAMGQGIAVVTFDSAANPDSRQLHVEQASIDLVGRDQMKSALE 192 Query: 147 QVNKDK--AKVAFFYSSPTVTDQNQWVKEAKAKIA---KEHPGWEIVTTQFGYNDATKSL 201 + V + P W ++ ++ ++ +G + KS Sbjct: 193 IIGGPGAEGTVGILSAQPESQLHADWCNAMLKEVEDNPEDFANVTVLPIAYGDDLPDKST 252 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 A+ +L+ Y D+D II+P + +AA+ +++ + + + G P+ M PY+E G Sbjct: 253 TEAQAMLQNYPDIDVIISPTTVGILSAAKVIQDMGS-ECKVTGVGLPSEMAPYIESGICY 311 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSM-KTGDKLDIKGVGQVEVSPNSVQGYDYEADGNG 320 + LW+ QG ++ +++ S GD + +G+ V + DG Sbjct: 312 DCYLWNPYDQGYLAAASVNSISTGESTGAVGDTVTAGRLGEYTV--------EEYYDGGT 363 Query: 321 IVLLPERVIFNKENIGKYD 339 VLL + + F KENIG+Y Sbjct: 364 QVLLGDPIRFTKENIGEYK 382 >UniRef50_A9BS22 Putative ABC transporter periplasmic sugar-binding protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BS22_DELAS Length = 329 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 6/309 (1%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 H F + + A AE ++ + K+ G+ +F + G +AG+ELG+ Sbjct: 1 MFHGFSRFSRALLACTLAALAGAAGAEDVSVVAKVGGIPWFNAMETGIGKAGRELGISSG 60 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 GPTE + QV+ + + + + I V L P +RA G++VLT +S Sbjct: 61 MVGPTEADAAQQVRAVEDLIARRSKVIAVVPNDARALEPVFRRARSAGIKVLTHESP-DQ 119 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + I + A G +D A+ + + K F S TV N W A A K+ Sbjct: 120 KGADWNIELSSVAGFGERHMDSLAKAMGGE-GKYVVFVGSLTVPLHNAWADAAIAHQKKQ 178 Query: 182 HPGWEIVTTQFGYNDA-TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDK 239 P ++V+ +FG ++ S ++A+ +++A+ DL +A + A +A + K D+ Sbjct: 179 WPKMQLVSERFGVAESLDDSYRSAQDLMRAHPDLKGFLAFGSQGPIGAGRAVADARKADR 238 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 +A+VG +P V G ++E +W+ G++ V+V L+ + D ++I G+ Sbjct: 239 IAVVGSFSPGQGAKLVRDGVIREGFIWNPALAGEVIVHVGKMLIDGR--EPTDGMEIPGL 296 Query: 300 GQVEVSPNS 308 G+V+V Sbjct: 297 GKVQVDRER 305 >UniRef50_A8RTG6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTG6_9CLOT Length = 342 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 138/337 (40%), Gaps = 14/337 (4%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 + + L + + + + A I K + G +Q ++ G + P Sbjct: 12 AVMMTGVLFLFSCQSSQFNRGKYAIIMKSRNNWYNELASEGFKQTVEDAGKNCIVLYPDH 71 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 PS Q+ LI N +++ AI V+A L P L +A ++G+ V+T D+D + RS Y Sbjct: 72 PSAQEQIHLIQNLIDEKVEAIAVAANDEYALTPVLTQAREKGISVITLDADVEAGSRSIY 131 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWE 186 I+ +LG LV ++ + + +QN+W+ K ++ E+ Sbjct: 132 ISPVDARELGKELVRE-VDRICGHSGQWGILSAGSRSANQNEWIYMMKQELQNLEYRDLR 190 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGF 245 +V +G + K+ + A +L+ Y DL + + AAA + KV ++G Sbjct: 191 LVDIAYGEGEYEKAAEKANLMLETYPDLKVMCCLSTEGIKAAADVVKARGQASKVKVIGL 250 Query: 246 STPNVMRPYV---ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQV 302 P+ M YV +W+ + G+++ YV L + + GD+ + G Sbjct: 251 GLPDQMEDYVGSDPEDICPVLYIWNPMDLGRVAGYVCLELSEGRIEERGDQELLLG---- 306 Query: 303 EVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYD 339 DY DG V+ E + + ENIG + Sbjct: 307 ----GRTYPMDYGHDGGLEVIAGEPIKVDSENIGYWK 339 >UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding protein n=46 Tax=Gammaproteobacteria RepID=A7ZI69_ECO24 Length = 327 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 18/339 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAF-IPKLVGVGFFTSGGNGAQQAGKELGVD 59 M + LG A IS +QAAE++ I K+ G+ +F G G +AGK GV+ Sbjct: 1 MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVN 60 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + GP+ QV++I + + + NAI + + L P K+A G+ VLT +S Sbjct: 61 ASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPG 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 +P ++ I + V+ A+++ K + S TV N W Sbjct: 121 QPSA-NWDIEIIDNEKFAAEYVEHMAKRM-GGKGGYVIYVGSLTVPQHNLWADLLVKYQK 178 Query: 180 KEHPGWEIVTTQFGYNDA-TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-N 237 + +P VT + ++ S +T ++K Y DL A+++ +N A +A + + Sbjct: 179 EHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAK 238 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 +KVA+ G P+ ++ G + E +D G VA LLK +K G L+++ Sbjct: 239 NKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPG--LEMQ 296 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIG 336 +G+ +V + I+ + ++ NK+NI Sbjct: 297 NLGKADVDMDK-----------RIIRFHKVLLVNKDNID 324 >UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZU3_SYNWW Length = 352 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 15/314 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNA 87 +IAF+ GV +F G GA+QAG+ LG +V Y GP + + ++Q+IN+ V QG A Sbjct: 52 KIAFVTFATGVPYFEIGAAGAKQAGQALGYEVVYKGPAKADSAAEIQIINDLVTQGEVKA 111 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+V+ + + PALK+A + ++V+TWD D +PE R Y +G ++ R Sbjct: 112 IVVACMDSKSIIPALKKAREADIKVVTWDLDCEPEGRDCYAGLMDLVVMGNEWIESMVRS 171 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 V D+ + A ++ T N+ + K A+++P ++V + D K+ Q ++ + Sbjct: 172 V-GDEGEYAIVMATLTNEFMNKRIDNMKKYAAEKYPKLKLVAVESCDADPQKAYQISKDL 230 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAE-NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L Y +L I A +AA+A E + K +V +VG TPN+ +P + G KE LW Sbjct: 231 LTKYPNLKCIATSSTEAFSSAAKAIEDDGKIGQVYVVGGLTPNLAKPAFKSGAAKEAVLW 290 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPE 326 D + V +A L++ + K++I G + E+ GI+ E Sbjct: 291 DPGKWAGFGVTIATQLIEGKTFDKVGKVEITGFPKAEL------------FAPGILYYHE 338 Query: 327 RVIFNKENIGKYDF 340 + F EN+ +YDF Sbjct: 339 LLTFTPENVDRYDF 352 >UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria RepID=A4TH97_YERPP Length = 329 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 23/334 (6%) Query: 9 IALLSALGIAAI------SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 +ALL+ ++A ++ + IA + K+ G+ +FT G +A K+L V+ Sbjct: 5 LALLNVCIVSACMLFTTQTLAAEKKHEIAVVAKVTGIPWFTRMEVGVNEAAKKLNVNAYQ 64 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP P + QV++I + + + +AIIV L P LK+A ++G+ VLT +S Sbjct: 65 VGPATPDPAQQVKVIEDLIAKNVDAIIVVPNDAKVLEPVLKKAQEKGIVVLTHESP-DQR 123 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + + + +D A+ + A + S TV N W A +++ Sbjct: 124 IGQWDVETIDSEKYAQANMDELAKAMGNKGG-YAIYVGSLTVPLHNAWADYAIKYQKEKY 182 Query: 183 PGWEIVTTQFGYND-ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKV 240 P VT + + KS T ++K Y + II + A QA + D++ Sbjct: 183 PEMFEVTPRLPVAENIDKSYSTTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKDQI 242 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 A+VG + P PY+ RG +K+ LWD G V +A+ LL + L I G+G Sbjct: 243 AVVGIAMPAQAAPYLMRGDIKKALLWDPKDAGFAVVEIANQLLNGQKVTE--DLTIDGLG 300 Query: 301 QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKEN 334 + +V NG++ + + K+N Sbjct: 301 KADVDSK-----------NGVIRFNKILEVTKDN 323 >UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8Z7_9FIRM Length = 329 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 17/325 (5%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQL 76 + + IA PK +G+ ++ G ++ + G +V GPT + V+ Q+ Sbjct: 20 GSAMTAMAEGYTIANTPKCIGISWWDRMQVGNERFTEATGNEVYQSGPTGDADVAVQISS 79 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 I + + G +AI V P + L +A+ + V++ +++ E Y + + Sbjct: 80 IEDAIASGVDAITVIPSDPSAVETTLAKALDNDIVVISHEAE-GLENTDYDLEAFVNEEY 138 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 G ++D+ A Q+ + + T + QW + A + + +P V + Sbjct: 139 GAHMMDLLAEQMGSEGG-YVIMMGTLTASSHQQWTEGAIKRQEEMYPDMYQVCDPVEGSS 197 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYV 255 S A+ ++ AY ++ I D N P A A E K+ ++A+ G + + Y+ Sbjct: 198 QEASYNAAKEVIAAYPEIGGFIGCDTNNPPGIAMAVEEAGKSGEIAVTGTCLVSQAKDYL 257 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 GT+K F WD G+ +A +L +++ G L + G V N + G + Sbjct: 258 NSGTIKTFTFWDPADAGEAMCALAVKVLDGETIEDGINLGVDGYEACTVKDNIIYGEAW- 316 Query: 316 ADGNGIVLLPERVIFNKENIGKYDF 340 V +N+G YDF Sbjct: 317 ------------VDVTTDNMGDYDF 329 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 118/299 (39%), Gaps = 5/299 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTE-PSVSGQVQLINN 79 + + I I + + GA+ KELG V +T+ P E + QV+++ + Sbjct: 43 ASSEKKYNIVLITMDSMDEHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMED 102 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 +NQ +AI+++ L P +++A G+ V+ DS K + ++ T Sbjct: 103 AINQKADAILIAPTDQTALTPVVEKAFDAGIPVILIDSPVKTDKYVSFV--ATDNIKAAE 160 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ K K+A + P K ++ +++P +I+TTQ+ D + Sbjct: 161 MAADKLGELLGGKGKIAIISAQPGSGTTIMRENGFKDRLKEKYPDIQIITTQYSMGDKNR 220 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERG 258 +L A IL A+ DL + + A A + KV +VGF ++ Sbjct: 221 ALNQALDILTAHPDLAGFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATINAIKEN 280 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 ++ + + G V +A L+ + + + + V + Y ++ Sbjct: 281 YIQASMVQNPYMMGYKGVEIAVDKLQGKEVPKRVDTGVTVMTKDNVDEVVKEYYKGQSK 339 >UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUT5_GARVA Length = 341 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 136/318 (42%), Gaps = 9/318 (2%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 T+ +A +SA G + + Q+++ ++ + K G+ +F +G ++ GK+ Sbjct: 7 TMLTVAFLAPMSACGSGGLIGSKQSSKNGKIKMVLVAKQEGIPWFDDMRSGVERFGKDHE 66 Query: 58 --VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 V+V P + Q Q+I++ ++Q AI+V P L P +K+A +G+ V++ Sbjct: 67 GEVEVKQIAPDSGDSAKQAQMISDLISQNVKAIVVVPNDPQALKPVIKQAKAKGIVVISH 126 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + + Y I G A + K K+A S T+ W K K Sbjct: 127 EGGNIADDVDYDIEAFKNKDFGEGFCKPLADGI-GGKGKIAAIVGSKTMETHMAWYKACK 185 Query: 176 AKIAKEHPGWEIVTTQF--GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 + I KE+P V+ + N+ + + + IL A+ DL + +A A + Sbjct: 186 SLIEKEYPDISFVSDEPYEDNNNDDTARKVSTEILNAHPDLKGLFGTSVSAGANMAAVLK 245 Query: 234 NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 N V + P+V PY+ G VK W G ++ +A +K + G Sbjct: 246 ERGNKNVFVSSLGIPSVDMPYINEGWVKYAKAWRPADAGYAALSLAYNKIKGKKISNGTN 305 Query: 294 LDIKGVGQVEVSPNSVQG 311 L++KG ++V + V+G Sbjct: 306 LNVKGYEDIQVDGHQVRG 323 >UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C300_9CLOT Length = 347 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 20/316 (6%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNA 87 ++ +PK++G+ F S N A++ ELG+ + Y GP+E S QV L+ + ++ G +A Sbjct: 48 KVVMMPKVMGMPIFESYYNSAKEQADELGITLDYIGPSELDASKQVNLVQDLISGGDTDA 107 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT-KPECRSYYINQGTPAQLGGMLVDMAAR 146 +++ + L P LK AM G+ V TWD D R Y+IN + G + Sbjct: 108 LLICPADGEALVPVLKEAMDAGIHVYTWDDDVVDESAREYFINMCSDKIYGEQM-GKTVG 166 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 ++ K K K+ + T T + + + E+P +++ T + D K+ + Sbjct: 167 EMLKGKGKIGVVNGNMTATSLTLKEEALQDVLKNEYPDIKVMPTVYHGGDQQKAYALCQD 226 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV-ERGTVKEFGL 265 +L A DLD I L AAQA + ++V + G PN ++ Y+ + G L Sbjct: 227 LLTANPDLDLIAVIATPGLLGAAQAVDASGRNEVIVYGAEQPNNIKEYMKKDGLEVVGCL 286 Query: 266 WDVVQQGKISVYVADA-LLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLL 324 WDV+ GK +V + + L K GD +V+GY + + Sbjct: 287 WDVMTLGKEAVNIVYSCLADGKEYKEGD---------------TVEGYPESSVEGTNITF 331 Query: 325 PERVIFNKENIGKYDF 340 + F+K+ + Y+F Sbjct: 332 NAVLEFDKDTVDDYNF 347 >UniRef50_C6BA29 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6BA29_RHILS Length = 334 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 173/348 (49%), Gaps = 22/348 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER----IAFIPKLVGVGFFTSGGNGAQQAGKEL 56 MT H FK + + +L + + N Q + + F+PKL +F GA++A KE+ Sbjct: 1 MTSHLFKTLLVAGSLIASIAAANAQECAKEPVTVGFLPKLDTDPYFQVAQTGAEEAAKEI 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 G P++ + Q+ INN V+Q I +SA + + PAL+RA ++GV+V+++D Sbjct: 61 GGKAIKQAPSQATAEAQIDFINNLVSQKVGVIAISANDANAVAPALRRAAKQGVKVVSYD 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SD RS ++NQ L M+++ + +N D + A S+PT T+QN W+ K Sbjct: 121 SDVSTAARSVFLNQAAGDSLAEMMLESMGQMINYD-GEFAILSSTPTATNQNAWIDFMKK 179 Query: 177 KIA--KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 +A K++ ++V +G + Q A + +A+ +L II P LPAAA+A + Sbjct: 180 TMAGDKKYSKMKLVQVAYGQESEQVNQQQALALAQAFPNLKGIIIPAGIGLPAAARAMDQ 239 Query: 235 LK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK-KGSMKTGD 292 KV + G + +++ Y++ G+V++ W+V G ++ Y A A+ + K + K G+ Sbjct: 240 AGLLGKVKLTGLAPATLIKKYIQNGSVQD-IWWNVKDLGYLTYYAAQAVAQCKLTGKEGE 298 Query: 293 KLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 + +G Y+ NG VLL I N+ ++ F Sbjct: 299 TFEAGRLG------------SYKVGANGEVLLGPADIVTPANVEEFKF 334 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 140/311 (45%), Gaps = 8/311 (2%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 T H ++LL+ + +A++ ++ + + K F+ + G + A KELG + Sbjct: 44 TRHFIYALSLLACVSSSALAKDLN----LPVVSKGFQHEFWQTVKMGTEAAAKELGDKTS 99 Query: 62 YDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 Y GP + + ++ Q+QL+ N + Q N ++++A+ + L P ++ A RG++V+T+DS Sbjct: 100 YVGPADETQIAEQIQLVENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGIN 159 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + ++ T + G A +K KV + + + ++ + Sbjct: 160 SDIPVSFV--ATNNRKAGAQAADALASQVNNKGKVGIIAHVAGTSSAIERSEGFMERMKE 217 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE-NLKNDK 239 ++P +++ Q+ D K++ +++A DL I + + A A + K Sbjct: 218 KYPDIKVLPVQYSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQNLKGK 277 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V ++GF + + +++ G ++ F + D Q G + +A L +++ + +K V Sbjct: 278 VKVIGFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKTLNAALSGQAVEKEIDIPVKFV 337 Query: 300 GQVEVSPNSVQ 310 ++ + Sbjct: 338 NAENINTPEID 348 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 10/282 (3%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 ++ IA +PKLV FF G +Q KELGV Y P + + QV++I + Sbjct: 68 PTVAPGTKITIAMVPKLV-HPFFEDCRKGGEQKAKELGVTFEYVAPQQADPALQVKIIED 126 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 + + +AI +S P + P + M++G+ ++T+D+D+ R YI GT + G Sbjct: 127 LIRKKVHAISISPNEPKSVEPVIAEGMKQGILMMTFDADSPNSQRVMYI--GTDNKAAGK 184 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ + KV + NQ ++ K + P ++V Q +D K Sbjct: 185 TMGETMAKLLNGRGKVGIITGGLGALNLNQRIEGFKEGVG---PNIQVVDVQATDDDLQK 241 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE----NLKNDKVAIVGFSTPNVMRPYV 255 L +E +L+A+ DL+ I A P AQ + + K+ IV F + + Sbjct: 242 GLSVSEAMLRAHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAI 301 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + G + + VQ G ++V A +L + +D Sbjct: 302 QEGIIAATMVQRPVQMGVLTVQWAYDILTGKAKPPFKNIDTG 343 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 5/298 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGK--ELGVDVTYDG-PTEPSVSGQVQLINNFVNQGY 85 +A +PK VG F+ + GA A K E VDV +DG E V+GQV L+ NF+ QG Sbjct: 44 ELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGV 103 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 + ++ +A L ++A+ +G+ V+ DS T P+ + + + Sbjct: 104 DGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPENVPVFATDNVAAAERATEYLV 163 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 Q+ +D KVAF P + + K + KE+P ++V Q ++ ++LQ E Sbjct: 164 EQLGEDGGKVAFIPFQPGTATNDTRTEGFKNVL-KENPQVKLVAEQSSESNYNRALQVTE 222 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 IL A+ DLDAI A + + AA+A + K ++ IVG+ T V G V Sbjct: 223 DILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGVVSALI 282 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIV 322 + + G V A +++ G G V + + VQ + N V Sbjct: 283 AQNPFRMGYDGVNAAVKMIRTGEQVEGGDTGAILVTRENIDDPEVQRVLDPSCENPPV 340 >UniRef50_C5EPZ5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPZ5_9FIRM Length = 347 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 13/335 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP 68 + + + + A I K + G ++ ++ G + P E Sbjct: 17 LMIAGIFISSCYGQQLHDKGTYAIIMKSRDNWYNELASQGYRRVIEDAGKNCITLYPDEA 76 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 + QV+LI N +++ +AI V+A D L P L+ A ++G+ V+T D+D K + RS YI Sbjct: 77 TAQEQVRLIRNLIHEQVDAIAVAANDEDALAPVLREAREKGISVITLDADVKADSRSIYI 136 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE-HPGWEI 187 +LG LV +A + + + +QN+W+ K ++ + + + Sbjct: 137 KPVDAEKLGRALV-RSACDICSGSGQWCILSAGSRSANQNEWMYWMKKELEESGYKDMRL 195 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFS 246 V FG K+++ E +LK Y ++ I + + AAA + +K V ++G Sbjct: 196 VDIAFGEGVYDKAVKETERLLKNYPEVKVICSLSTEGIKAAADVVKKQGKEKTVKVIGLG 255 Query: 247 TPNVMRPYVERG---TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 P+ M Y+ G +WD V+ GK++ +V+ L + K + Sbjct: 256 LPSQMAEYIGDGEEDICPVMYIWDPVEMGKVAGFVSMGLWSGNIEEQPGK-------DIL 308 Query: 304 VSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 + + DG ++ E + +K+NIG + Sbjct: 309 LDNGAAYRISTGYDGGLEIISGEPIRIDKDNIGYW 343 >UniRef50_C9D206 ABC transporter, substrate binding protein n=2 Tax=Rhodobacteraceae RepID=C9D206_9RHOB Length = 335 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 137/337 (40%), Gaps = 18/337 (5%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + R + AL ++ V A + + K+ G+ +F + +G ++ ELGVD Sbjct: 9 MKRLTGLVSALAL-TVGMATTVVAETSMGIVVKIGGIPWFNAMEDGIERRAAELGVDAEM 67 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP + QVQ I + + +G + I V L P LK+A G+ V++ + E Sbjct: 68 IGPVSADPALQVQAIEDLIAKGVDVIGVVPNDEAALEPVLKKARDAGIIVISHEGP-GLE 126 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + + G + + + ++ A + S TV N W A A + + Sbjct: 127 NVDWNFELASAEGFGEAHAKLLSDK-TEEGGSYAVYVGSLTVPLHNAWADAAIAWMDENR 185 Query: 183 PGWEIVTTQFGYND-ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKV 240 P +IV ++G + S TA ++ A DL +A + A +A E K ++ Sbjct: 186 PDLKIVGDRYGVAENVDDSRSTALDLIAANPDLKGFLAFGSQGPIGAGRAVEERRKTGEI 245 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 ++G +P R + G + +W+ Q G++ V + + L+K ++ G DI G+G Sbjct: 246 QVMGPFSPGQGRKMIHSGVLTGGYMWNPAQAGEVFVTLGEMLVKGEKIEAGT--DIPGLG 303 Query: 301 QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGK 337 VE ++ + N E + Sbjct: 304 VVEPD-----------VEGRDIITDNLLEINAETVDD 329 >UniRef50_Q1M9D2 Putative substrate-binding component of ABC transporter n=3 Tax=Rhizobium RepID=Q1M9D2_RHIL3 Length = 332 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 142/309 (45%), Gaps = 8/309 (2%) Query: 1 MTLHRFKKIALLSALG--IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 M K +L + + IA ++ + A + + K+ G+ +F + G Q+AGK+ + Sbjct: 1 MKRRDILKFSLAAGVAWLIATPNLAMAADPVMVTVVKIAGIPYFGALERGLQEAGKQFNI 60 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 DV+ GP + QV+L+ + + + + I + + P LKRA G++V+ + Sbjct: 61 DVSMTGPANIDPAQQVKLLEDLIAKKVDVIGLVPLDVKACEPVLKRAQAAGIKVIVHEGP 120 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + E R + + + G + + A+++ ++ + + T N+W A A Sbjct: 121 -EQEGRDWDVELIDSTKFGEVQMQSLAKEMGEE-GDYVVYVGTLTTPLHNKWADAAIAYQ 178 Query: 179 AKEHPGWEIVTTQFGYND-ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 +P +V +F D + +T +LKAY L I+A +N AA A + Sbjct: 179 KAHYPKMNLVADRFPGADEIDSAYRTTIDVLKAYPKLKGILAFGSNGPIAAGNAVKEKHL 238 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 + +VA++G P+ + + G ++E +W+ + G V VA +L ++ G +D+ Sbjct: 239 SKRVAVIGTVLPSQAKDLIMDGVIREGFMWNPREAGSAMVAVARLVLDGTKIEDG--MDV 296 Query: 297 KGVGQVEVS 305 G+G+ V Sbjct: 297 PGLGKATVD 305 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 116/314 (36%), Gaps = 11/314 (3%) Query: 6 FKKIALLSALGIAAISMNVQA-----AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 +A L + A A IPK F+ S +GA+QAG+E+G + Sbjct: 115 LVSVATLLVCAGCQPPADTSANTGEKELHFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKI 174 Query: 61 TYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 T+ GP+ E Q+ ++ F+N + I+++ + D L +K A + GV V+ +DS Sbjct: 175 TFRGPSKENDRDEQINVVQGFLNARVDGILLAPLDADALVRPVKEASRAGVPVVIFDSGL 234 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAAR-QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + + T GG L A + + V +Q + Sbjct: 235 NTDPGDFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLRYEQGSESTHQREEGFL-YS 293 Query: 179 AKEHPGWEIV-TTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENLK 236 E+ ++ + Q+ ++ A+ +L + D D I A +A K Sbjct: 294 IAEYSNIRVLSSDQYAGTTTESAIDKAQALLNRFGDEADGICTVCEPTAEGALRALRERK 353 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 KV +V F + + +R + G V L D V G +V A L+ + + Sbjct: 354 LAGKVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQAVKTMAAHLRGETPEQFIDTG 413 Query: 296 IKGVGQVEVSPNSV 309 + ++ Sbjct: 414 VFVATAKNQDDENI 427 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 118/312 (37%), Gaps = 4/312 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 +A LSA G + + IA + K F+ S GA A + G VT++GP Sbjct: 16 TVAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDAAAKYGATVTFNGPDN 75 Query: 68 PS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 S V Q ++ N +N+ +A+ ++ + L PA++ A + + +D+ + + Sbjct: 76 DSQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIPLFAFDTAFETNADAI 135 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 T + G + + K K A S T + + K P E Sbjct: 136 TSTVKTSNREVGKVAAENLIALLNGKGKYAVIAHSQTDATSTERRDGFLDYMKKNAPDME 195 Query: 187 IV-TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DKVAIV 243 +V Q+ D K+ A IL+A DLDAI A + + AA E+ KV +V Sbjct: 196 MVGEVQYSNADQAKAQDIASAILQANPDLDAIFATNEATVVGAATPVESALKSGHKVLLV 255 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 G + + Y+ G + + Q G ++ A L + Sbjct: 256 GVDSGKAQQQYIRDGVISGSVSQNPYQIGYKTIENAVKSLNGEKIDKVIDSGCFWYNADN 315 Query: 304 VSPNSVQGYDYE 315 + + VQ YE Sbjct: 316 IDDDDVQQAMYE 327 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 6/310 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 + L R+A I + G F+T+ GA+ A ++LG + GP E Sbjct: 27 AVFLGGLTTSCGGGGGEGEGYRLALIVGVTGDEFYTTMECGARAAARKLGARLNVQGPEE 86 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 S + Q ++N V +AI+++ + ++ A+ + + V+ D+ + E + Sbjct: 87 FSPAAQTPILNAVVQSNPDAILIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEIAL- 145 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 + GG + A + K KV P ++ +Q + + I K++P E Sbjct: 146 ARISSDNVEGGRMAGEALAEQIGGKGKVLLISVKPGISTTDQRKQGFEEAI-KQYPDIEY 204 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFS 246 + T++ +D T++ L+A+ DL I + + A + K D+V++V F Sbjct: 205 LGTEYCNDDPTQAASITTSTLQAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVSVVAFD 264 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + RG + G+ V +A L+ G ++ G V+ Sbjct: 265 ASPTQVEDLRRGNLDVLIAQHPNDIGRRGVQIAVRYLESGEEPENKQITT---GFTTVTR 321 Query: 307 NSVQGYDYEA 316 +++ + E Sbjct: 322 DNLDAPEVER 331 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 118/297 (39%), Gaps = 4/297 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFV 81 + +P+ + ++ GA+ A +EL VD+ Y GP + ++ ++++ Sbjct: 44 AKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDVDLEYIGPRQANIDEHLRILKKAA 103 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLV 141 + II ++ P + + + + VLT D+D R YI GT G + Sbjct: 104 AAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYI--GTDNYYAGFIA 161 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 A + + VA S T Q Q V+ + + K IV + + ++ Sbjct: 162 GRALVEDTQGMVNVAIITGSLTAVHQQQRVRGFRDAV-KNEKRIRIVAVEESHITRVQAA 220 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPNVMRPYVERGTV 260 + ILK + +++A A A+ E ++ I+GF T Y+++GT+ Sbjct: 221 EKTYTILKKHPEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTI 280 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 + + + + G +V + ++ + + K + + ++ + Y+ + Sbjct: 281 EATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIRKEDLPLRPARNYEVKTP 337 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 120/313 (38%), Gaps = 19/313 (6%) Query: 3 LHRFKKIALLSALGIAAISMNV--------------QAAERIAFIPKLVGVGFFTSGGNG 48 L F IAL+ +L A + + E + G+ ++ G Sbjct: 9 LSIFLAIALIVSLAYALVPNSKDVTQASSGNPKLKGSPKEEYYMVTFASGIEYWKGCFKG 68 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 + A GV Y G + V+ QV ++ + + I+V+ +PD L + A+++ Sbjct: 69 MKAAADLYGVKAIYTGAPQFDVNQQVTVLRQVIAKKPAGILVTCANPDALKAPIDEAIKK 128 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 G+ V+T+D+D+ R + T G + ++ K +V + + Sbjct: 129 GIPVITFDADSPKSLRYSVLE--TGNYNAGAMAARYLGKLLGGKGEVGI-STVAAQLNHE 185 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 Q + + KE PG ++V+ ND+TK+ + +L+A+ ++ I DA Sbjct: 186 QRKQGFIDTLKKEFPGIKVVSIVNDENDSTKAARGVAAMLQAHPNIKGIFCTDAPGGVGV 245 Query: 229 AQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 A A + K K+ IV F T +++G + G + LK G Sbjct: 246 ATAIKEANKVGKIKIVSFDTDKGTLDLIKQGVIDASIAQGTWNMGFWGMTFLF-YLKHGI 304 Query: 288 MKTGDKLDIKGVG 300 + D G+ Sbjct: 305 VNPVDNWKKFGIN 317 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 12/284 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 L + ALL+ A+ MN A + RIA IPK V V FF NGA+ A +LG Sbjct: 19 KLPPLFQFALLAIPLTLAVQMNATAKDVKDLRIAVIPK-VAVPFFDDCNNGAKAAADKLG 77 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 V + P S QV+++ + +++ + I +S P + A+K+A+ G++V+T+DS Sbjct: 78 VQYQWVVPQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVTFDS 137 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 D+ RS YI GT G + + + + +VA + N+ + K Sbjct: 138 DSANSGRSMYI--GTINSAAGETMGESMAKAIDGEGEVAILTGQLGAANLNERITGIKKS 195 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN--- 234 ++K +P ++V T+ +D K++ T E + + + L I PA ++ Sbjct: 196 LSK-YPKIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVSKVMATKEF 254 Query: 235 -LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVY 277 K V + F V+ G ++ + V GK++V Sbjct: 255 GSKKGAVKVFAFDDLPDTVKGVKEGYIQGIMVQRPVTMGKLAVE 298 >UniRef50_A9H7R1 Putative exported protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9H7R1_GLUDA Length = 335 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 22/343 (6%) Query: 7 KKIALLSALGIAAISM-----NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 ++ AL+ A+ ++ ++ + R+ PK G +F + +GA++A KELG + Sbjct: 6 RRAALIGAVLLSGMNPVSAVHAQDSGFRLMMTPKWTGFPYFEAAAHGARRAAKELGDTLV 65 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 Y GP S QV+ + NF+ Q N +I+SAV + + P LKRA +RGV V T+DSD Sbjct: 66 YAGPDRADASLQVETLENFLTQRPNGVILSAVDLNAVAPVLKRARKRGVVVTTFDSDAAL 125 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQ--WVKEAKAKIA 179 R ++NQ + Q ++D A ++AF +SPT + + + Sbjct: 126 PARDMFVNQLSYEQAARTMLDAALIDA-PQGGEIAFISASPTAPNHVAHMRIMTQLTQTD 184 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII-APDANALPAAAQAAENLKND 238 ++ + +V Q+ +D KS A +++A+ +L II + +A AA + Sbjct: 185 PKYKVFTVVDRQYAQDDDAKSYDVAINLMQAHPNLKVIISSSAVSAPAAARAIDASGHAG 244 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIK 297 KV GF+ P+ ++ Y++ G+ K F LW+ + G ++ YV L +K G Sbjct: 245 KVFATGFALPSAIKNYLQDGSEKAFALWNPEELGYLATYVTHLRLAGKLDLKPGTSFVAG 304 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 G Y+ +G + + +IF K+NI F Sbjct: 305 TAGT------------YKVGEDGEIDYGKPLIFTKDNIEAAGF 335 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 118/299 (39%), Gaps = 12/299 (4%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-----GVDVTYD 63 + L +S + IA IPK ++ GA +A +EL VD+ + Sbjct: 9 LTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKGIKVDLIWK 68 Query: 64 GP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP E Q+Q++ NF+ + + ++++ + + + A++ + V+ +DS K + Sbjct: 69 GPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVIFDSALKTD 128 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 ++ T GG L Q+ + K V + + + + Sbjct: 129 KYVSFV--ATDNYKGGQLAAERMGQLLEGKGNVILLRYAVGSASTEEREAGFMDTLKSKF 186 Query: 183 PGWEIV-TTQFGYNDATKSLQTAEGILKAYS-DLDAIIAPDANALPAAAQAAENLKN--D 238 P +++ + Q + Q ++ +L + +++ I P A A+A ++ Sbjct: 187 PNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKALRDIGKAGG 246 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 KV +VGF + ++ G V+ + + ++ G + V L+ ++ ++ Sbjct: 247 KVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKVEKRIDTGVQ 305 >UniRef50_A9R0Y3 Carbohydrate uptake ABC transporter 2 (CUT2) family, periplasmic carbohydrate-binding protein n=44 Tax=Proteobacteria RepID=A9R0Y3_YERPG Length = 367 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 140/314 (44%), Gaps = 9/314 (2%) Query: 8 KIALLSALGIAAISMNVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 L S +A S Q A + + + K+ G+ +F G + G+ LGV+ G Sbjct: 44 TTLLASHAAWSADSNTPQKANKPFTLGVVVKVGGIPWFNVMEQGIKAEGQALGVNAWQVG 103 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 PT + QV+ I + + + + I V L P LKRA + G++V+T +S + Sbjct: 104 PTTADPAEQVRAIEDLIAKKVDVIGVVPNDAKVLEPVLKRAQEAGIKVITHESPGQINAD 163 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + T + + DMA Q ++ K A F S TV N+W A A +P Sbjct: 164 WDFELLDTQSMGANHMKDMA--QCMGEEGKYAMFVGSLTVPLVNEWADAAIAYQKANYPK 221 Query: 185 WEIVTTQFGYNDA-TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA-I 242 +V +FG ++ S++TA +L + DL I++ + A +A + K + + Sbjct: 222 MVLVEDRFGVAESVDDSMRTANDLLSKHKDLKGIMSFGSQGPIGAGRAIDKRKKNDTTCV 281 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQV 302 G TP +E+G + + + + GK+ V VA A++ +K G KL +G++ Sbjct: 282 FGTFTPGQGIKLLEKGAIDGGYISNPMVAGKVFVQVATAMMNGEPIKDGVKLG--DMGEI 339 Query: 303 EVSPNSVQGYDYEA 316 + N++ + E Sbjct: 340 KTQGNTILSDNPEK 353 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 115/293 (39%), Gaps = 6/293 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VD 59 M + A L + + I FIPK F+ NG ++A +E G +D Sbjct: 1 MKKYLTFLFACW-VLLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEGQID 59 Query: 60 VTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 +T+ GP Q++++ + G +AI+++ L +++A++ G++V+ DS Sbjct: 60 LTWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSA 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 ++ T G L ++ + +V + + + + Sbjct: 120 LDGSGHLQFVT--TDNHASGQLAARQLAELMGQRGRVVLLRTVAGSASTDDRARGFIDYL 177 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-N 237 + P IV +G A K+ +A +L +D DAI A + +A +A Sbjct: 178 SANAPAISIVADVYGGGSAGKARHSASALLAKSADFDAIFAVNESATDGMLRALREAGLA 237 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 + +GF + + +E+ + + D + G +++ A L+ +K Sbjct: 238 GRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRNRPIKE 290 >UniRef50_A9KIX1 Putative sugar ABC transporter, substrate-binding protein n=4 Tax=Clostridiales RepID=A9KIX1_CLOPH Length = 367 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 8/315 (2%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 A I K G + G +Q + G P + Q+ INN ++QG + I Sbjct: 52 TYAIIVKSAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATAEDQITCINNAISQGVDCI 111 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 ++A D L PAL A +G+ VL+ DS T R ++NQ Q+ L+D A + Sbjct: 112 AIAANDTDALEPALTEAKNQGIHVLSLDSATNANSRKVFVNQAGTTQIAQALMD-AILDI 170 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAEGI 207 + A ++ T T+QN W+ K + ++ ++ +G ++ S E I Sbjct: 171 SGGSGDWAVLSAASTATNQNAWIDGMKTVMQDSKYSKLNLIGVYYGDDEYQASCDQTEAI 230 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERG---TVKEF 263 L A ++ I AP + AAA+ ++ + KV + G P+ M Y+ + Sbjct: 231 LAADPNIKVICAPTTVGIMAAAKVLQDKGLSGKVKLTGLGLPSEMADYIGDDDQHSCPYM 290 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 LW+ +Q G ++ Y + +L+ TG V + N ADG ++ Sbjct: 291 FLWNPIQLGNLAAYASISLVNGTI--TGAADQSFTVPDKTLGDNGSYKITAAADGGTEII 348 Query: 324 LPERVIFNKENIGKY 338 L F NI ++ Sbjct: 349 LGAPFKFEPSNIAEW 363 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 4/260 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 ++ F + FF + NG Q+ K+LGV VT + Q+ + + + Q NAI Sbjct: 46 KLGFAVSTLNNPFFVAMSNGVQEEAKKLGVQVTILN-GNNDPATQLNQVEDLIQQHVNAI 104 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 I++ L A+++A + + V+T D + +I + + G M D + + Sbjct: 105 ILNPTDSQSLSTAVEQANRAHIPVITLDRSVTKGNVACFIASNS-VEAGKMAADELIKAL 163 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 K +V + + K +I K PG +V Q D +++L + IL Sbjct: 164 -GGKGQVVELQGVIGTSAEADREKGFDEEIGKA-PGIRVVARQTANFDRSQALNVMQNIL 221 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDV 268 +A+ ++ + A + A +A + + IVG V +G + Sbjct: 222 QAHPNIQGVFAQNDEMALGALKAIQEAGKHNIKIVGIDGEKEAVNDVHKGLLYADIAQQP 281 Query: 269 VQQGKISVYVADALLKKGSM 288 VQ+G + V A L++ + Sbjct: 282 VQEGILGVEYAVKLVEGEKV 301 >UniRef50_A6X767 Periplasmic binding protein/LacI transcriptional regulator n=36 Tax=Proteobacteria RepID=A6X767_OCHA4 Length = 336 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 10/332 (3%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKEL-GV 58 T + ++ A +A + + A E+ IA + K+ G+ +F G + K V Sbjct: 4 TTKKLLTGTIIGAAIVAGSAGTLVAQEKPVIATVVKISGIPWFDRMNTGVEAYQKANPDV 63 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 T GP + Q+Q++ + V +G NA+ V + P L KRAM+RG+ V+T ++D Sbjct: 64 VATQSGPATADAAQQLQIVQDLVAKGVNALAVVPMDPAVLEGTFKRAMERGIIVVTHEAD 123 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + + + A G L + A + K K F S QWV + Sbjct: 124 NQVNTMA-DVEAFDNADYGTALNERLAECMGK-SGKWTTFVGSLGSRTHMQWVGSGEEN- 180 Query: 179 AKEHPGWEIVTTQF-GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 AK++P ++V ++DA + + A+ IL+ + DL N + +A + Sbjct: 181 AKKYPDMQLVDPNNESFDDANGTYEKAKEILRKHPDLKGFQTSAGNDVLGVGRAIDEAGL 240 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 + KV +VG PN +E G + G WD + G VA LL+K +K G L + Sbjct: 241 SGKVCLVGTGLPNPSADLLESGAITAIGFWDPQKAGMAMNAVAKLLLEKKEVKEGTDLGV 300 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERV 328 +G +V V + +G GNG+V+ + Sbjct: 301 EGYNKVSVKKGAGEGL--LVIGNGMVIADKAT 330 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 12/296 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + ++LL A+ + ++ Q IA IP L GF+ + GA++A K LGV++ + Sbjct: 8 VFTVLTLSLLIAVAMYGLA-QQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRLGVELIF 66 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 G E S + Q+ ++N + + +AI+++ + L LKRA + G++++T D+ Sbjct: 67 QGGPEFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITVDTFIGEN 126 Query: 123 CRSYY---------INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKE 173 + + GG + A + +K KV P ++ +Q + Sbjct: 127 GQYQTGKGNADFPLAYVASDNVEGGRIAARALAKAIGEKGKVYVSNVKPGISTTDQREQG 186 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 K ++ K++PG ++ TQ+ NDA K+ L DL + + + AA + Sbjct: 187 FKEEM-KKYPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAIGAANGVK 245 Query: 234 NL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 N K V + F P + ++ GT+ + G+I+V A L + Sbjct: 246 NAGKRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKALNGEKI 301 >UniRef50_Q2RRZ3 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Alphaproteobacteria RepID=Q2RRZ3_RHORT Length = 349 Score = 214 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 139/360 (38%), Gaps = 33/360 (9%) Query: 3 LHRFKKIALLSALGIAAISMNVQA------------------AERIAFIPKLVGVGFFTS 44 + +F +L+A +A ++ A + IA + K+ G+ +F Sbjct: 1 MKKFLSSLVLAASLVAGPALAADAPVDVSQVPKGFSAKDVGKSYSIATVVKVDGIAWFDR 60 Query: 45 GGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKR 104 GA+Q G + G D GP++ + QVQL+ N + QG +AI V S + L P LK+ Sbjct: 61 MREGAKQFGADTGHDTWMVGPSQADAAAQVQLVENLIAQGVDAICVVPFSVEALEPVLKK 120 Query: 105 AMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 A RG+ V+ ++ + + + G L+++ + K + K S T Sbjct: 121 ARDRGIVVIAHEA-SNITNADFVLEAFDNLAYGAKLMEVLGTYM-KGEGKYVTTVGSLTS 178 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQ-FGYNDATKSLQTAEGILKAYSDLDAIIAPDAN 223 QN+W+ A A P E T + Y+DA + +L Y D+ I+ Sbjct: 179 KSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTDYNKLKEVLTTYPDIKGILGGPMP 238 Query: 224 ALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 A + E DK+ G +V Y+ +G ++ WD VA Sbjct: 239 TSAGAGRLISERGLKDKLFFAGTGLVSVAGEYLSKGDIQYIQFWDPAVAAYAMNIVAVMA 298 Query: 283 LKKG--SMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 L +K G L + G + A + ++ V K+N+ Y+F Sbjct: 299 LDGKADQIKAGLNLGLPGYTSLTAP---------VAGKDKLLYGAGWVGVTKDNMEDYNF 349 >UniRef50_A1SLY7 ABC sugar transporter, periplasmic ligand binding protein n=4 Tax=Bacteria RepID=A1SLY7_NOCSJ Length = 348 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 14/313 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 + K G+G+F G ++ E G+D +GP+E + GQV +I + + Q AI Sbjct: 48 YVVVVKATGIGWFDRMEVGVKEWASETGLDAREEGPSEATNEGQVAIIQDLIAQKPTAIS 107 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 V GL L +A G+ V++ ++ + I G +++ Sbjct: 108 VVPNDLAGLESVLGQARDAGIIVVSHEA-VGIKNVDIDIEGFENTAYGAQIMENLGE-CT 165 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT-QFGYNDATKSLQTAEGIL 208 + + F T ++WVK A K + PG V + + A+ +L Sbjct: 166 GGEGEYVQFVGRLTNGSHSEWVKGAYEKQQADFPGMTRVEDPIESEENEEVAYNKAKELL 225 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 Y D+ + A+A E K D V ++G S P+V Y+E G + + WD Sbjct: 226 SKYPDIKGFQGSAGTDVVGIARAVEEAGKTDSVCVMGTSIPSVAGGYLESGAIDKIFFWD 285 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPER 327 GK + VA L + G+++ G L + G + + G D GN V Sbjct: 286 PAMAGKAQLAVAKILAEGGTIEEGTDLGVPGYESLV----KLDGADNAFAGNAGVA---- 337 Query: 328 VIFNKENIGKYDF 340 + EN+ +YDF Sbjct: 338 --VDVENMDEYDF 348 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 5/277 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAI 88 +A + K + ++ + GA A KELGV V GP E V GQ LI + + +G +A+ Sbjct: 41 VAVVLKALNSDYWKTVQAGANDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDAL 100 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +V+ + P+ +A + + V+ D+D + + ++ GT G L + Sbjct: 101 VVAPLQPNAAITTFDKAEKEKIPVVLIDTDANWDKKKSFV--GTGNIAAGKLGGEYISKK 158 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 K + P Q++ + A+ + E G ++V Q ++ K++ E +L Sbjct: 159 LKKGDEAIIIRGVPGDRTQDERTQGAQKAL--EAAGIKVVEIQPANSEREKAISVMENLL 216 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDV 268 + + ++ + + A +A + + +G ++ G + + Sbjct: 217 QTHPNIKGVFCTNDEMALGAVKALQQAGKKNIISIGVDGSPDALKSIKEGGLTGTVAQNS 276 Query: 269 VQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 GK V A +L+ ++T V + V+ Sbjct: 277 YDIGKKGVETAVKVLRGEKVETRIDTGTTLVDKQNVN 313 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 116/288 (40%), Gaps = 4/288 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAI 88 I I K F+ + GA++A E V++T++GP TE V Q++++ +++ +AI Sbjct: 48 IPIISKGFQHQFWQAVKAGAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAI 107 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +A+ P L++A G+ V+ +DS + T L ++ Sbjct: 108 GFAALDSQASVPLLQKAKAAGIPVIAFDSGVDSDIPIT--TASTNNVAAAALAADKMAEL 165 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 + ++ T +I +++P +IV Q+G D KS A+ ++ Sbjct: 166 IGGEGEIGVIVHDQTSVTGVDRRDGFVNRIKEKYPNIKIVDIQYGGGDHLKSTDLAKAMI 225 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 +A+ ++ + + A LK ++ ++GF + ++ G + + Sbjct: 226 QAHPNIKGFFGSNEGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVMAGAITQN 285 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 V G +V A ++ +++ + + + ++ YE Sbjct: 286 PVGIGYETVKAAVEAIRGEKVESTIDTGFYYYDKSNIDSDEIKAVLYE 333 >UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=9 Tax=Bacillales RepID=C6CRC9_PAESJ Length = 337 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 4/247 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 E+ + L G+ ++ +G G + A + LGV V Y G T+ V ++ ++ + + Sbjct: 44 EKYVMVNFLAGIDYWKNGLKGFEDAAEALGVSVEYRGSTQYDVQEEMMVLEQVIARSPAG 103 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I VSA+ + L PA+ +A++ G+ V+ +D+D YI GT G+ + Sbjct: 104 IAVSAIDSEALNPAINKAVEAGIPVVMFDADAPRSKAYSYI--GTNNYNAGVTAARKMAE 161 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + KV P + + + + + KE P ++V G D S Q + Sbjct: 162 LTGGTGKVGVIT-LPNQLNHQERTRGFEETLEKEFPDLQLVGIADGKGDQMISEQKVRDL 220 Query: 208 LKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L ++DL I +AN A A K D+V I+ F T V+ GT+ Sbjct: 221 LSKFTDLSGIFVTEANGGVGAGNAILRLNKLDQVKIISFDTDKGTLDMVKSGTISATLAQ 280 Query: 267 DVVQQGK 273 G Sbjct: 281 GTWNMGY 287 >UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C7R7_THENR Length = 350 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 133/325 (40%), Gaps = 24/325 (7%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G + I Sbjct: 24 TILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKGVDGI 83 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI--NQGTPAQLGGMLVDMAAR 146 +S P+G+ +KRA+ +G+ V+ +DSD+ R YI N G L+ Sbjct: 84 GISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYIGTNNYNAGYEAGKLMAQLIE 143 Query: 147 QVNKDKAKV--AFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIVTTQ---FGYNDATK 199 + +K + A + N+ ++ K + + G EIV +DA K Sbjct: 144 KYKAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPCNDDAAK 203 Query: 200 SLQTAEGILKAYSDLDAIIAPDA------NALPAAAQAAENLKNDKVAIVGFSTPNVMRP 253 ++Q + Y+DLD A +A N + +A + K ++ IV F T Sbjct: 204 AIQILRDASRKYTDLDGWFASNASLVAPPNTIISALGGPQRAK--ELLIVAFDTLEPELE 261 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 V+ G +K G S + + K G KT L + V+ Y Sbjct: 262 LVKAGVIKGLIGQRPYDMGYFSTVLLYFMAKDGVEKTLGNL------EKIVAEYGKPDYK 315 Query: 314 YEADGNGIVLLPERVIFNKENIGKY 338 +G+ I+ I ENI +Y Sbjct: 316 IVKEGDYIIDTG-VDIVTSENIDEY 339 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 112/281 (39%), Gaps = 3/281 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 + I + ++ GA++AGK V++ Y GP SV QV+L+ + + Sbjct: 53 PHVILISQEFDNPYWRKIEQGAKEAGKNYDVNIEYIGPLRTSVDEQVKLLEKAIASRVDG 112 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 IIV + + P + +A+ R + V+T D+D R Y+ GT G L+ A Sbjct: 113 IIVQNLKDEAFIPLIDKAISRNIPVITIDADAPKSRRIAYV--GTNNFEAGQLLGKAVVS 170 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + + ++ + T +Q ++ + IA EHP ++V+ ++ AE + Sbjct: 171 RVEGERELGVMIGTDTSENQRLRLQGFLSVIA-EHPRLKVVSVASSNISRIQASIQAEQM 229 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 L+ + + ++ A A +NL + I GF +++G + + Sbjct: 230 LRKHPHISVMVGTSALDAIGIRMATKNLHRQDIQIFGFDDVEETIEAIQQGDIVATVVQK 289 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 G +V + L ++ I+ + + V Sbjct: 290 PYDMGYSAVKLMVEHLSGKQIQKEHFTAIEVIDRQNVQQER 330 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 5/277 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNF 80 + +I PK + ++ + GA+ A KELG ++ + GP E V+ QV +IN+F Sbjct: 25 VQASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVINDF 84 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 VN+ +AI+V+A + L P LKRA + G+ V+T DS + +I T + Sbjct: 85 VNKKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFPISHI--ATNNKEAAKK 142 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + K +VA K I+ + ++V Q+ +D + Sbjct: 143 AAEVLANIIGKKGEVACIPFVAGAATSIARENGFKEGIS-NYKNIDLVAVQYSQSDYATA 201 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNVMRPYVERGT 259 ++ E IL A+ +L I A + AA+A + K V +VGF ++ G Sbjct: 202 MKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAMKEGI 261 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 + + G V A A L+ ++ + Sbjct: 262 IDALIVQRPYMMGYEGVKNAVAALEGEEVEKLIDTGV 298 >UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Firmicutes RepID=C8WV69_ALIAD Length = 349 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 E + L G+ ++ G Q A K+LGV + G + ++ +V + + + Sbjct: 56 ETYYMVTFLSGIEYWKGCFAGMQAAAKDLGVKAVFTGAPQYDINQEVTTMQQVIAKHPAG 115 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+V++++ + P + +A+ G+ V+++DSD R Y+ GT G Q Sbjct: 116 ILVTSINAQAMTPVINQAIAAGIPVISFDSDAPQSKRYAYL--GTSNIEAGQKAADYLGQ 173 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 +VA +P + +Q V+ K ++A ++PG ++V Q G +D K+ Q + Sbjct: 174 ALGGHGEVAVIT-TPGELNLDQRVQGFKDEMAAKYPGVKVVAVQNGNSDQIKTAQVTSAL 232 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L+ Y +L I +A+ AA A + K V IV F T ++ G + Sbjct: 233 LQTYPNLAGIFCTEADEGTGAATAVQEAGKTGTVKIVSFDTDKATLNAIKSGQITATVAQ 292 Query: 267 DVVQQG 272 G Sbjct: 293 GTWNMG 298 >UniRef50_B8G8A7 ABC-type sugar transport system periplasmic component-like protein n=3 Tax=Chloroflexus RepID=B8G8A7_CHLAD Length = 708 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 86/331 (25%), Positives = 153/331 (46%), Gaps = 15/331 (4%) Query: 16 GIAAISMNVQAAERIAFI--PKLVGVGFFTSGGNGAQQAGKELGVD--VTYDGPT-EPSV 70 G + ++A +R I PK +G+ F GA++A ELG + + GPT E SV Sbjct: 384 GTVRDPITLRAGQRADMILLPKFLGIAVFDQAYEGAKEAHAELGNKGNLIFTGPTAENSV 443 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRSYYIN 129 +GQ++ + N QG A+++S + D + A + A GV+V+TWDS + S ++ Sbjct: 444 AGQIETLTNAATQGVKAVMLSNNAGDQIAAAAQAAQAAGVKVVTWDSPIPSAQGESVFVA 503 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIV 188 Q + G ++ DMA + + A +SP +QN W+ K + + ++ ++V Sbjct: 504 QVDFNETGRVMADMALSILGPQGGEFAILSASPDAANQNAWIAAMKQVLTEPKYANLKLV 563 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFST 247 T +G + + +S A ++ Y +L I+AP + AAA+A + DKV + G Sbjct: 564 DTVYGNDQSEESYNQALALVDKYPNLKLIMAPTTVGIAAAAKAMTDEGLCDKVKVSGLGL 623 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSP 306 P+ M Y G +F LW G ++ Y+A L G++ + +G + Sbjct: 624 PSEMASYTLSGCAPQFALWSFKDLGYLTYYLAYGLATGQLQGVEGERFNAGRMGTYTIEK 683 Query: 307 NSVQGYDYEADGNGIVLLPERVIFNKENIGK 337 + + VL+ ++ EN+ K Sbjct: 684 DPTRPNGLR------VLMGPFTVYTAENVNK 708 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 13/313 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVD--VTYDGPT-EPSVSGQVQLINNFVNQGYN 86 + +PK +G+ F GA++A ELG + + GPT E SV+GQ++ + N QG Sbjct: 69 MILLPKFLGIAVFDQAYEGAKEAHAELGNKGNLIFTGPTAENSVAGQIETLTNAATQGVK 128 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK-PECRSYYINQGTPAQLGGMLVDMAA 145 A+++S + D + A + A GV+V+TWDS + S ++ Q + G ++ DMA Sbjct: 129 AVMLSNNAGDQIAAAAQAAQAAGVKVVTWDSPIPSAQGESVFVAQVDFNETGRVMADMAL 188 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-EHPGWEIVTTQFGYNDATKSLQTA 204 + + A +SP +QN W+ K + + ++ ++V T +G + + +S A Sbjct: 189 SILGPQGGEFAILSASPDAANQNAWIAAMKQVLTEPKYANLKLVDTVYGNDQSEESYNQA 248 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEF 263 ++ Y +L I+AP + AAA+A + DKV + G P+ M Y G +F Sbjct: 249 LALVDKYPNLKLIMAPTTVGIAAAAKAMTDEGLCDKVKVSGLGLPSEMVSYTLSGCAPQF 308 Query: 264 GLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIV 322 LW G ++ Y+A L G++ + +G + + + V Sbjct: 309 ALWSFKDLGYLTYYLAYGLATGQLQGVEGERFNAGRMGTYTIEKDPTRPNGLR------V 362 Query: 323 LLPERVIFNKENI 335 L+ ++ ENI Sbjct: 363 LMGPFTVYTAENI 375 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 7/321 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 +T+ +L+ G S + + IA I K ++ S GA++A KE G ++ Sbjct: 9 ITMSVMLSAGVLAGCGQ--KSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAKEAGANI 66 Query: 61 TYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + GP TE + G+V ++ + +NQ + I+++A L ++ A+ + ++T DS Sbjct: 67 IFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTVDSGV 126 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + + +I T + ++ KV P V+ Q K + ++ Sbjct: 127 DSDKVASFI--ATDNEKAASQAADVCAELIGKSGKVGVVNFVPGVSTAVQREKGFRDGMS 184 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-ND 238 K H G E++ TQ+ +D +K++ E IL A D+ AI A + + AQA + Sbjct: 185 K-HSGIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVAQALKGKGVAG 243 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 KV +V F +E G++ + + + G+ V AL+K +++ + Sbjct: 244 KVKVVAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVKNVLALMKGETVEKRIDTGVTI 303 Query: 299 VGQVEVSPNSVQGYDYEADGN 319 V + ++ VQ Y Sbjct: 304 VTKENINDPEVQKVLYPEKNK 324 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 10/291 (3%) Query: 4 HRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 + FK AL+SAL A + + +IA + K + +F S GA++ KE +D+ Sbjct: 8 NIFKFSALISALPALAFAAD---KPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQ 64 Query: 64 GPTEPSVSGQ-VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 + + Q V L+ N + + +AIIV+ PA ++A + G+ ++ D + Sbjct: 65 VAEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAK 124 Query: 123 CRSY----YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + G GG L + K VA P V + Q A Sbjct: 125 AAEAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGALKAF 184 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-N 237 A E+P +IV +Q + ++L IL A +++ I A + N A A EN Sbjct: 185 A-EYPDIKIVASQSANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVENAGLA 243 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 KV + G+ + YV++G ++ +Q I++ A + K + Sbjct: 244 GKVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEI 294 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 7/277 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 + + I + ++ GA++A ++ G+++ Y GP V ++++ + Sbjct: 45 KPQLHLVLISQEYDNPYWRLVQQGAREAAQQKGIELEYLGPARADVKEHIKILEMAIASK 104 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 + II + + P + A + G+ ++T DSD R Y+ GT G + Sbjct: 105 VDGIITQGLEENEFTPIINEAARMGIPIITVDSDAPHSKRVAYV--GTDNYAAGYMAGRE 162 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 + +A+VA S T ++Q V+ K + K +PG I+ +S +A Sbjct: 163 LIAKSAGRAEVALITGSFTASNQKDRVRGFKDAV-KTYPGIHIIDIAESNISRIQSAASA 221 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA----IVGFSTPNVMRPYVERGTV 260 + + Y ++D + A AQ + + ++ + I+ F + +G + Sbjct: 222 YTLAQKYPEIDTFVGTSALDGLGIAQMLKEMGSETLKTPIRIIAFDDLPETLTLINQGVI 281 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + + G+ SV + LK + T D+K Sbjct: 282 ESTIVQQPFIMGRESVNLLMDYLKGEKIVTVYNTDVK 318 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 8/298 (2%) Query: 6 FKKIALL--SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 KK+A L +AL + +S+ QA + +A + + FF + +GA+ KELG ++ Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVL 60 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 S ++ + + +G AI+++ D + A++ A + + VLT D Sbjct: 61 DSQN-DPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGD 119 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 +I + +GG + + +KAKV + + + + H Sbjct: 120 VVSHI--ASDNVVGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVKGSH- 176 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIV 243 E++ +Q D TK L E +L A D+ A+ A + A +A + +V IV Sbjct: 177 -MELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK-EVMIV 234 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 GF + V RG + G + + AD +LK ++ + +K V + Sbjct: 235 GFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVEDYIPVPLKVVTK 292 >UniRef50_UPI0001C368C5 ABC sugar transporter, periplasmic binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368C5 Length = 383 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 13/320 (4%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 + +IA + K +F G ++ ++ GV+ P P + Q++++++ + Q Y Sbjct: 72 SQYKIAVLIKGTA-EWFDRLELGVKKFSEDYGVNAVMIEPANPDAASQLEMLDSLLTQDY 130 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +AI V L +LK A+ + V V+ ++ C Y Q G + + A Sbjct: 131 DAICVVPNDSSALETSLKGALDKKVVVIGHEASDLVNC-LYDTEAFNAEQYGSAIAEQLA 189 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ----FGYNDATKSL 201 + + K T + Q+ + A + K +P +V T + Sbjct: 190 QAMGK-SGVYGDMVGFTTSVNHMQYSEAELAYMKKNYPDITVVNDTLPTCESQETVTTAY 248 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTV 260 + A+ +LK+ ++ I + AQA E L KV IV TPN+ Y+E+GTV Sbjct: 249 EQAKQVLKSNPEVTGFIGHASGDGLGIAQAVEELGLAGKVHIVCGGTPNMYIDYLEKGTV 308 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNG 320 +WD + G + A +L ++ GD D+ G V D N Sbjct: 309 DCVSVWDPMISGYVMCQAAYNVLSG--VEIGDGADLSGKAGFAEGYEKVTQVD---GANR 363 Query: 321 IVLLPERVIFNKENIGKYDF 340 ++ + KEN ++ F Sbjct: 364 CLIGNAPITATKENAREFGF 383 >UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Thermotoga RepID=B1LAH5_THESQ Length = 343 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 33/326 (10%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G + I Sbjct: 24 TILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKGVDGI 83 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +S P+G+ +KRA+ +G+ V+ +DSD+ R YI GT G Q+ Sbjct: 84 GISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYI--GTNNYNAGYEAGKLMAQL 141 Query: 149 ------NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIVTTQ---FGYNDA 197 K ++A + N+ ++ K + + G EIV +D+ Sbjct: 142 IEKYRAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPCDDDS 201 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-----KVAIVGFSTPNVMR 252 K++Q + + Y+DLD L A + + + +VGF T Sbjct: 202 AKAIQIIRDVTRKYTDLDGWFMSGGWPLFAPKETVISALGGPERMKDLLVVGFDTLLPEL 261 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 V+ G VK G +SV V + K G T L V G Sbjct: 262 ELVKAGAVKGLVGQRPYDMGYLSVLVLYNMAKIGVENTLKMLPKVVKEDGTVDYIIDTGV 321 Query: 313 DYEADGNGIVLLPERVIFNKENIGKY 338 D I +EN+ ++ Sbjct: 322 D---------------IVTEENVDQF 332 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 9/294 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TE 67 +ALL+ G + + ER+A + K + ++ GA+ AGKELGVDVT GP E Sbjct: 18 MALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAGKELGVDVTVVGPNAE 77 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 V Q+ +I + +NQ A++VS PD + P L+ A V VL D+D K + ++ + Sbjct: 78 SEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPVLLIDTDAKLKNKTSF 134 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 I GT G + + KVA + T ++ VK AKA + + G I Sbjct: 135 I--GTENYEAGYEGGKLLSSLLQKGDKVAIISGALGNTATDERVKGAKAALEEA--GMVI 190 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFST 247 V Q +D TK++ E IL+ +D+ + A + + +A E K V ++G Sbjct: 191 VAEQPADSDKTKAMSVMENILQKNNDVKGVFAANDDMALGVLRAVE-AKGLDVKVIGTDG 249 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 + G + + + G V A A + + ++ + + Sbjct: 250 TLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGEKVDKRINSGVEVITK 303 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 7/290 (2%) Query: 4 HRFKKIALLSALGIAAISM-NVQAAER-IAFIPKLVGVGFFTSGGNGAQQA-GKELGVDV 60 +++ + + AA+++ AA+R IA I K ++ + GA A K + Sbjct: 21 SNMRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVRKGAADAVAKVENYTM 80 Query: 61 TYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 T+ GPT E +V+ QV ++ + V Q AI+++ PD L P++++A + + V+ DS Sbjct: 81 TFQGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLIDSMI 140 Query: 120 KPECRSYYIN-QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 YY + T + G + KVA P V + V + I Sbjct: 141 SDSGAKYYQSFLATDNEAAGEALGKEMVDHVGQTGKVAIMSYVPGVGSEIGRVGGFRKYI 200 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KN 237 A EH +IV + + ++ +L + DL I A + +A + K+ Sbjct: 201 A-EHSHIQIVGPFYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGVGRAIQQAGKS 259 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 K+ + F + +V GT + + G V A +L Sbjct: 260 GKLYAIAFDGNEDEQGFVRSGTFQLLAVQGSYAMGAKGVETAIGVLTGAK 309 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 115/321 (35%), Gaps = 28/321 (8%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAE---------------------RIAFIPKLVGVG 40 R + LL+ I S+ Q + +I + Sbjct: 3 KTRRLLSVLLLAIFMITGCSIEGQNNKEESKESGVEEKASETKTDGDMKIGVSLSTLNNP 62 Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF S G ++A + V+ T + S Q + + + QG + I+++ V + Sbjct: 63 FFVSIREGVEEAAGKENVE-TVITDAQNDSSTQNNQVEDLITQGVDLIVINPVDSTAIAT 121 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 ++++A + + V+ D + +I + GG L + + A+V Sbjct: 122 SVEKANEANIPVICVDRGSDQGELVSFI--ASNNVEGGKLAGEYILEKVGENAEVIQLEG 179 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP 220 P + + + + + ++ +Q D + + E +L+A+ D+ A+ Sbjct: 180 IPGASSTRERGEGFEEATNGK---INLLASQTANFDRAEGMTVMENLLQAHPDVKAVFCQ 236 Query: 221 DANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 + A++A + D V IVGF VE G + + GK+++ A Sbjct: 237 NDEMALGASEAIKASGKD-VTIVGFDGNEDAIKAVEEGNLSATVAQKPKEMGKLAIETAI 295 Query: 281 ALLKKGSMKTGDKLDIKGVGQ 301 LK ++ ++ + + Sbjct: 296 KYLKGEEVEETVDSPLELIKK 316 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 114/296 (38%), Gaps = 4/296 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNF 80 Q I + K F+ + +GA+QA K+L V VT++GP TE V Q+ ++ Sbjct: 22 AQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAAA 81 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + + AI +A+ P LK+A + V+ +DS + T + L Sbjct: 82 LAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIPVT--TTTTDNKAAAAL 139 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 ++ +VA T +I +P +IV+ Q+G D KS Sbjct: 140 AADKMAEMIGKSGEVALVVHDQTSRTGVDRRDGFVNRIKSAYPNIKIVSVQYGGGDQLKS 199 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGT 259 + + IL+A +L I + + + +K KV I+G+ + + + G+ Sbjct: 200 TEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDSGKQQKNAIMDGS 259 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + + V G +V +A +K + + ++ + Y+ Sbjct: 260 MAGAITQNPVGMGYKTVEMAVKAIKGEKLPKVVDTGFFWYDKTNIADPKIASVLYD 315 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 113/282 (40%), Gaps = 4/282 (1%) Query: 18 AAISMNVQAAER-IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQ 75 AA + + AE+ IA IPK + ++ GAQ AG + G + + G T+ + GQV+ Sbjct: 52 AAPTEAKEDAEKVIAVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVK 111 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ +F+ +G +AI++S V+PDG+ P L++A G+ V+ D + ++ Sbjct: 112 LVEDFIQRGVSAIVISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPRSTVST-NDEA 170 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + A + P + K ++ +P ++I+ T +G Sbjct: 171 AGKFAAEKLKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDELG-TYPNYKIIGTYYGKG 229 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D ++ + IL + D+ + + + V F + + Sbjct: 230 DRNQTYNITQDILTSNPDITGFYTVNEGSSAGVTLGVREGDLKEKIFVAFDPSTEVLDAI 289 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 G V + G+ +V A +L +++ + + Sbjct: 290 RDGYVDGAVAQNPYLIGRTAVLNAIKVLNGETVEKKIDVPVT 331 >UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YAA5_DICT6 Length = 331 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 115/316 (36%), Gaps = 14/316 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL----- 56 ++ + A + A+IPK + F G +GA + +EL Sbjct: 1 MKKFLMIFFIVVIFLLMATTAQTPKKLVFAWIPKALNNPVFELGRDGAFKRAEELSKKGP 60 Query: 57 -GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 V+V Y + Q +++ + V + + I +S P L + +A++ G+ V+T+ Sbjct: 61 YKVEVLYVASVASDATEQARVVEDVVARKVDGIAISCNDPTALIDVINKAVEAGIPVMTF 120 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 D+D+ R Y+ G GG + VA P + + ++ K Sbjct: 121 DADSPKSKRFTYL--GVNNYEGGKWAAKLLVRAMGTSGDVALLTGVPGALNLEERMRGFK 178 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA--- 232 +I K++P +IVTT Y+D + +Q E ++ Y L L A + Sbjct: 179 DEI-KKYPKIKIVTTVACYDDINRGVQVVEETMQKYPKLRGWFFVGLWPLLAERGSMPLW 237 Query: 233 -ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD-ALLKKGSMKT 290 + K KV V F T V ++ G + G ++ + ++ Sbjct: 238 EKAAKAKKVFTVAFDTLPVELQLLKEGYLCGLVGQKYWGWGYDAIDILYRKVVNNEKFPD 297 Query: 291 GDKLDIKGVGQVEVSP 306 + V Q V Sbjct: 298 WIDSGMDIVTQKNVDA 313 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 8/305 (2%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 R +A+L L S+ +A I K V ++ G +QA K+LGV T+ Sbjct: 2 RKILVAILIILFPLIFSIGYSKEIHVAVIGKSV-HPYWAEVELGVKQAAKDLGVKATFFV 60 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 P + + Q+ + +F+ G + I ++ P + P +++AM +G+ V+T D+D R Sbjct: 61 PQKEDIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMAKGIPVITLDTDAPQSKR 120 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNK-DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 YI GT G + M + KVA S T + + ++ IA Sbjct: 121 LVYI--GTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMNSLERIRGFMDGIASN-K 177 Query: 184 GWEIVTTQF--GYNDATKSLQTAEGILKAYSDLDAIIAPDA-NALPAAAQAAENLKNDKV 240 +VT + D +++ AE L Y DL A N AA K +V Sbjct: 178 RIVVVTKPALCDFEDTGRAVTLAEQALLTYPDLRGFFGVYAFNGPAAAKAVKAAGKVGQV 237 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 IV F T ++ G + G SV V + +KG T +L + Sbjct: 238 LIVCFDTTAEHMQLIKEGVISATVGQRPYMMGYKSVEVLTKMAQKGVDATLKELPANRII 297 Query: 301 QVEVS 305 V Sbjct: 298 DTGVD 302 >UniRef50_C0E8U4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8U4_9CLOT Length = 351 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 15/317 (4%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 + A + K + S +G Q A ELGV+ +GP PS + QV++IN+ + + Sbjct: 37 RKTSTYAIVVKDRNNQYMQSMISGFQAACDELGVNAISNGPDTPSAAEQVEIINDLIEKE 96 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 + I ++A + L P+L+ A+ RG++V++ DS R +I Q P ++G +L+ A Sbjct: 97 VSVIAIAANDAEALSPSLQIAIDRGIKVVSLDSAVAASGRQLHIQQARPKKVGRVLI-QA 155 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE---HPGWEIVTTQFGYNDATKSL 201 A ++ + K+A S+ +QN W+K KA+ + + G E +G +D+ S Sbjct: 156 AAEIIEGSGKLAVLSSTENAPNQNDWIKWMKAEYDENPDKYAGIEWTEIVYGNDDSELSQ 215 Query: 202 QTAEGILKAY-SDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV--ERG 258 +L+ Y +L IIAP + AAA+ ++ + G P+ M Y + G Sbjct: 216 AKTRELLEKYGEELKIIIAPTVVGMEAAAKVITETGSNT-KLTGLGLPSQMSKYFTSDDG 274 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADG 318 LW+V+ A L+ G +K GD D+ G++ + D DG Sbjct: 275 ICPWMYLWNVIDA-GYLAAYAAHALESGEIK-GDPTDVFMAGRL-----GAKVVDDAEDG 327 Query: 319 NGIVLLPERVIFNKENI 335 VLL + + +K+NI Sbjct: 328 GYEVLLGDPIKVDKKNI 344 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 5/261 (1%) Query: 38 GVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDG 97 F+ G Q+ GV + P ++ Q + + +F+ QG + I++ + + Sbjct: 70 SFEFYVDLEKGMQEVADAQGVKLITQDP-NGDLAAQTKQVEDFITQGVDGIVLCPIDSNA 128 Query: 98 LCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAF 157 + Q G+ ++T D + +I + LGG L + KVA Sbjct: 129 AVTEAETINQAGIPLVTTDIAVAGGDVASHI--ASDNTLGGQLAAQFIGEQLGGTGKVAL 186 Query: 158 FYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAI 217 +PT+T + +A+++P EIV Q G + K L E IL++ D+ + Sbjct: 187 IN-NPTITSLIERETGFTDTMAQKYPDIEIVAVQSGESKREKGLSVMENILQSNPDVQGV 245 Query: 218 IAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT-VKEFGLWDVVQQGKISV 276 A + A QA + + D + IVGF Y++ G+ +K + V+ GK ++ Sbjct: 246 FAVNDMMGLGALQAVQAAQRDDIVIVGFDATEEAVKYIKEGSALKASVAQNPVELGKTTM 305 Query: 277 YVADALLKKGSMKTGDKLDIK 297 ++ ++ + ++ Sbjct: 306 ETMLKVIAGEQVEKNIPVPVE 326 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 126/318 (39%), Gaps = 8/318 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 ++ F +A + + A + A I I K ++ GA++AGK+LGV+V Sbjct: 8 LSRRAFTALAGAAVIATAMPVTSFAADVTIPIIVKDTTSFYWQIVLAGARKAGKDLGVNV 67 Query: 61 -TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 E ++GQ+ ++ N V A+++S L + A + V ++ DS Sbjct: 68 PELGAQAESDINGQISILENAVAGKPAAVVISPTEFKALGKPIDEA-AKSVPIIGIDSGA 126 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQV----NKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + ++ Q G + D A + K++ ++ + P V Q + Sbjct: 127 DSKAFKSFLTT-DNVQGGRIAADGLAAAIKEMTGKEEGEIVILTNLPGVGSLEQRREGFL 185 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 +I +HPG +++ ++G AT L ++ A L + A + QA Sbjct: 186 DQIKTKHPGLKVIADKYGDGQATTGLNMMTDLITANPKLVGVFASNLILAQGVGQAIAEN 245 Query: 236 K-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 K DK+ ++GF + + +++ G + + D + G + A A+ K ++ Sbjct: 246 KLGDKIKVIGFDSDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALAVSKGEKVEANVDT 305 Query: 295 DIKGVGQVEVSPNSVQGY 312 V + ++ + Sbjct: 306 GANLVTKANMADPKIDAL 323 >UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K692_BACHD Length = 332 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 109/308 (35%), Gaps = 21/308 (6%) Query: 1 MTLHRFKKIALLSALGIAAISM------------------NVQAAERIAFIPKLVGVGFF 42 M H F + + + A S+ + I + ++ Sbjct: 1 MKRHLFFVVGFMICISALATSIYSFVQVTRVETNVPSSTSISLPSSHFVLIAEEENNSYW 60 Query: 43 TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL 102 GA++A + V V Y P + Q++LI+ ++ + IIV AV+ + P + Sbjct: 61 RLVEKGAREAENQFDVLVEYKAPKRSNPEEQLKLIDMAISAKVDGIIVQAVNEEMFTPLI 120 Query: 103 KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSP 162 +A+ G+ V+T D+D R YI GT G + A + VA S Sbjct: 121 NKAVDAGIPVITIDTDAPRSNRVAYI--GTDNYYSGTIAGKAMLDDMEGDIHVAVITGSL 178 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 + Q V+ + P +V + ++ A +++ + ++A A Sbjct: 179 ESSHQKLRVQGFID-MISNEPRVTLVEVEASNISRLEAELKAHQLMEEHPHINAFYGTSA 237 Query: 223 NALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 AAE L D + ++ F T +E+ + + + + G SV + + Sbjct: 238 LDGIGIVAAAEKLGLDDLYVIAFDTLPENLSLLEQEKIDAIVVQEPFEMGLKSVELLLDI 297 Query: 283 LKKGSMKT 290 + Sbjct: 298 REGQPYSM 305 >UniRef50_A3DI69 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Clostridium RepID=A3DI69_CLOTH Length = 372 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 9/268 (3%) Query: 39 VGFFTSGGNGAQQAGKEL---GVDVTYD--GPTEPSVSGQVQLINNFVNQGYNAIIVSAV 93 ++ + G A KEL GV V Y+ GP +P QV I + QG++ I V Sbjct: 90 HAWYDAIKCGIDAAVKELAEKGVTVDYEWYGPAQPDAVDQVNSIETAIGQGWDLIAVDVN 149 Query: 94 SPDGLCPALKRAMQRGVRVLTWD-SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK 152 P+ A+ A+ +G+ V + SD R++++ P G L ++ K Sbjct: 150 QPELTGEAINNAVAKGIPVAVFGTSDVPNCDRAFFVGNTDPYGDGCALAKAVCEKM-GGK 208 Query: 153 AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYS 212 ++A + + ++ K IAK +P EIV Q ++ K++ E L+AY Sbjct: 209 GQIAILAGTIGALAHEERLRGFKDTIAK-YPDIEIVDEQRDNDEVEKAISITESWLQAYP 267 Query: 213 DLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQ 271 +L I+ + + A QA + K+ K+ I G ++ GT+ + + Sbjct: 268 NLGGILCNNMSNPVGACQAVADAGKSGKIVIGGMDHDLRALNALKDGTLYVAQVQNCYDM 327 Query: 272 GKISVYVADALLKKGSMKTGDKLDIKGV 299 G +Y A + ++ + V Sbjct: 328 GYKLIYNAIKTIDGEKVEESTAVGSTSV 355 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 8/287 (2%) Query: 5 RFKKIALL--SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 R KK+ L +AL ++S QA + +A + + FF + +GA+ KELG ++ Sbjct: 2 RMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIV 61 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 S ++ + + +G AI+++ D + A++ A + + VLT D Sbjct: 62 LDSQN-DPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 +I + +GG + AKV + + + + Sbjct: 121 EVVSHI--ASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGS- 177 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAI 242 +++ +Q D TK L E +L A D+ A+ A + A +A + V I Sbjct: 178 -KMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS-VMI 235 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 VGF + VERG + G I + AD +LK ++ Sbjct: 236 VGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVE 282 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 108/277 (38%), Gaps = 8/277 (2%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDG-PTEPSVSGQVQLIN 78 Q + I K + FF + GA+ +E G ++ G E Q+ + Sbjct: 57 MAAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYELLAVGMQNETDFESQINAVE 116 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY----YINQGTPA 134 NF+ QG +AI+V+ + L+RAM+ G+ V+ +D G Sbjct: 117 NFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIELAFVGPDN 176 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 ++G + A + + +V +P + Q + IA G E++ ++ + Sbjct: 177 RMGAEMAGNALGEALGEGGRVVIIEGNPGADNATQRRLGFEDAIATH--GLELLESRTAH 234 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 + ++ Q +L A+ DL ++A + + +A + D + +VGF + P Sbjct: 235 WETEEANQVFAAMLTAHPDLQGVMAANDSMAIGVIEALDAAGRDDILVVGFDAVPAVLPM 294 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 +E G + ++ +A +L+ G G Sbjct: 295 IEDGRMLATVDQFGQAMAANAIDLALEVLETGVDLEG 331 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 117/288 (40%), Gaps = 5/288 (1%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 + + I I + ++ GA +A ++ G+D+ + GP ++ Q+ L+ Sbjct: 46 PASGEPRYHIVLIEQERYHPYWEMVEKGAAEAAEKYGIDIEFTGPVRNNMEEQLNLLEKA 105 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + +AIIV ++ + P + +A++RG+ V+T D+D R Y+ GT G Sbjct: 106 IAARVDAIIVQGLNEERFTPVIDKAVRRGIPVVTIDTDAPNSQRLTYV--GTDNLAAGER 163 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + + K+ S +Q Q + K I EH G EIV + ++ Sbjct: 164 LGRLVVETTGGIGKIGVIIGSDQAANQLQRLDGLKK-IVAEHEGLEIVDVRSSNISHMEA 222 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 +Q A +L+ + ++ ++ A QAA+N D + I+GF + +G + Sbjct: 223 IQQAANMLRNHPEITIMVGTSATDALGVLQAAKN--RDDLTIIGFDNQKETLEAIRKGEI 280 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + G+ +V + ++K ++K + V Sbjct: 281 EATVAQQPFLMGETAVRLLYEHFGGQALKKAYFTEVKVLNAHNVEEGE 328 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 117/291 (40%), Gaps = 5/291 (1%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TE 67 I LLS+ G + Q + I K+ ++ + GA+ A KE V + + P E Sbjct: 21 ITLLSSCGGPGSGADHQQIYDVDMIVKMDRGDYWKTTKLGAEVAAKEFNVRLNFVAPENE 80 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 V GQ++L+ + + +AII++A + L R + V++ DS+ + Sbjct: 81 NDVEGQIRLMEEAIERRPDAIILAASDYEALGQVTDRTSYYDIPVISMDSEVASTKVKTF 140 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 + GT G + +++ + NQ + +A+ P + Sbjct: 141 V--GTNNYEAGQKAAERLVDLTGPVSEIGIINFVKGARNANQREEGFLDYVAR-FPDVHV 197 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFS 246 V Q+ +D + + +LK + +L+ I++ A + A +A + L KV ++ F Sbjct: 198 VDIQYCGSDEYLAYKLTADMLKRFPNLNGIVSLSAESSIGAGRAVDELGYGGKVKMIAFD 257 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 P M ++ V+ + + G ++V A + ++ D K Sbjct: 258 NPPEMLELLQEEKVQAMVVQNPFNNGYMAVAAAVQAARGEKLEDRIPTDTK 308 >UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPH3_9BACL Length = 329 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 4/281 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I F+P FF S GAQQ K+LGV + Y+G + S S Q +N V++ NA+I Sbjct: 44 IGFVPGETTDPFFISMAYGAQQEAKKLGVKLIYEGASTYSPSAQTPYVNAMVSRHVNALI 103 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 V + P +K+A+ G++VLT DS + + + GG + Sbjct: 104 VCPTDLTAMIPPIKQAVNAGIKVLTADSTIS-DASLLTSRITSDNEQGGAAAADFLGSMA 162 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 + V SP ++ V A++ K++P ++V ++ T++ Q A+ ++ Sbjct: 163 HGQGVVGVLDPSPGISTDKARVDGFIAEMKKKYPKIKVV-IEYDNEQTTQAEQLAQDLML 221 Query: 210 AY-SDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 Y L I D + AAQ + + V IVG+ ++ G + Sbjct: 222 HYGKSLVGIFGTDDTSASGAAQGVRSSGSATHVNIVGYDAEPAEVQDLKEGMISALIAQK 281 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + +G+++V A L+ S+ +L + + ++ N Sbjct: 282 PMIEGELAVEYAVEALEHKSVPKFVQLPNVVITKANLAQNQ 322 >UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY95_ACICJ Length = 329 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 114/288 (39%), Gaps = 3/288 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 + IA +P + F+ + +GA K+LG+ + + G + S Q+ + + + A Sbjct: 36 KTIALVPGIATDPFYITMQHGAAAEAKKLGLHLIWQGGSSFSPETQIPALQALLAKHPAA 95 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 ++V+ + L +++ + G+ V++ D+ + + GG A Sbjct: 96 LLVAPTNEKALINPIRQFIAAGIPVISVDTTIS-DTAILKSRITSNNVQGGASAARAIAG 154 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 K VA P ++ + K A++ K + G ++V ++ + TK+ A+ + Sbjct: 155 FAHGKGDVAVINVKPGISTTDARQKGFLAQM-KHYKGMKVVAIEYDDDSPTKAFTEAQLL 213 Query: 208 LKAYSDLDAIIAPDANALPAAAQA-AENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L Y L I A + + +A K KV +VG+ +++G + + Sbjct: 214 LLKYPHLKGIFATNVFSGEGVGKAVVAAGKKGKVDVVGYDAEPGEVKLLKQGVISTLIVQ 273 Query: 267 DVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 ++G++ V A +L S + + + ++ Y Sbjct: 274 RPAEEGRLGVKYAYDILTGKSAQVPASKRLANITVTTAEASNPTYAKY 321 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 8/273 (2%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLIN 78 + I K ++ + GA A K+ GV V ++ P ++GQ+ ++N Sbjct: 36 VPAKPAKHYHFTLITKSNASPYWLAVREGADAAAKKFGVSVAFEAPASGTDLAGQIGMVN 95 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 N V G + II++A +P L +K A+ + V+T DS P ++ + Sbjct: 96 NAVTGGTDGIILAAQNPQALLKPVKSALAHHIPVVTVDSGLSPNISDCFL-ATSNVGAAA 154 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT-TQFGYNDA 197 L A + K + A + T + K + K +P + + Q+ ND Sbjct: 155 ALAKYTADHLMGGKGQYAIVDFNHTASTGIARPKGFMLGM-KSYPHIKKMGPIQYSNNDV 213 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 + L+ A +L Y L I + A A+A + KV +VGF V+ Sbjct: 214 SAGLRIATTMLTQYPHLKVIFGANDRAALGPAEAVQRAHA-KVKVVGFDADLGEIALVKA 272 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 G ++ L G Y ALL K KT Sbjct: 273 GIIQASILQSPYDMGY---YAVVALLDKLDGKT 302 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 129/330 (39%), Gaps = 15/330 (4%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAE-----RIAFIPKLVGVGFFTSGGNGAQQAGKE 55 M RF + A AL A+ +A RIA IP L F+ + GA+ A Sbjct: 1 MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 +G + + G + + QV +++ + + +AI+++ L LK+A G+ ++T Sbjct: 61 IGAQIIFQGAPDFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMITV 120 Query: 116 DSDTKPECRSYYINQGT--------PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 D+ G LGG + + DK KV P V+ Sbjct: 121 DTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLALAIGDKGKVYVSNVKPGVSTT 180 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 +Q + K+++AK HPG ++ TQF NDA K+ + + DL + + + Sbjct: 181 DQREQGFKSEMAK-HPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGLG 239 Query: 228 AAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG 286 +A + + + +V F P + ++ G + + G V A A L Sbjct: 240 SANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAYAHLTGQ 299 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 S+ T + + V+ +V + Y Sbjct: 300 SIPTKIGTGFTVINKSNVTDPAVARFIYAE 329 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 6/296 (2%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS-VSGQVQLI 77 A S+ +I +I K + + G + AGK +G PT V QVQL+ Sbjct: 71 ATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQAPTTADSVEEQVQLM 130 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 N + Q +AIIV +G+ +++A GV VLT + ++ G Sbjct: 131 ENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPA---AEDTFLRTGVDYYES 187 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + A K K ++ + + ++ E+ G EIV +Q Sbjct: 188 GYTMAKAVADKLGGKGKFIILEGPAGASNAIERLNGINTGLS-EYEGIEIVASQTANFKR 246 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 T+ + E +++ Y+D+DA+IA + + A QA V + GF V+ Sbjct: 247 TEGMSVTENLIQQYTDIDAVIACNDESALGAVQALTAANMSDVLVCGFDGSVDATNAVKE 306 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK-GVGQVEVSPNSVQGY 312 GT+ D G ++ A L + G + V ++VQ Y Sbjct: 307 GTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPFPTAANDPLVIADTVQNY 362 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 10/291 (3%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGY 85 RIA +PK F+ S GA +A +EL VDV + GP E + QV ++++FV QG Sbjct: 40 RLRIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGV 99 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 + I+++ + L ++ A Q + V+ +DSD + ++ T + G L Sbjct: 100 SGIVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDHVSFV--ATDNEAAGRLAGEHL 157 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT-QFGYNDATKSLQTA 204 + + KV K + PG + + Q+G + + Sbjct: 158 GKAIGEDGKVVVLRYQEGSASTQHREKGFLDAVRA-MPGVTVASENQYGGATTESAFHKS 216 Query: 205 EGIL----KAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGT 259 E +L A + + P+ + QA KV VGF + + G Sbjct: 217 ESLLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALREGD 276 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 ++ + + G ++V A L + + V + ++ +VQ Sbjct: 277 IEALVVQNPFNMGYVAVKTMVAHLHGEKVAARIDTGSRVVTRQDLDDPAVQ 327 >UniRef50_A5FYX5 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FYX5_ACICJ Length = 345 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 6/269 (2%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNF 80 IA +PK + F + GA Q KELG VD+ + S + +++ N Sbjct: 32 ARANKRYTIAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSDASQEAEIVQNL 91 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + + + + + A +P L + A+++G+ +TWDSD R Y G G+ Sbjct: 92 ITRHVDGMAIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVY--YGVDNTKMGVS 149 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + A + K KV P T+ N + K + K H G E + F +D TK+ Sbjct: 150 MGEQALKFMGTKGKVILISGGPGATNLNARLAGVKQVMGK-HKGIEFLGPYFDNDDLTKA 208 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN--LKNDKVAIVGFSTPNVMRPYVERG 258 + + +L A+ D AI+ A A A KV I+G P VE+G Sbjct: 209 QELIDNVLTAHPDAGAIVDVAAVAFFGKLSAMPKLIANRGKVKIIGSDVLAPEIPLVEKG 268 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGS 287 V+ D G +V + +L Sbjct: 269 YVQALVGQDYWGWGYQTVTIIHNMLTNKK 297 >UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGQ4_PETMO Length = 342 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 123/316 (38%), Gaps = 12/316 (3%) Query: 18 AAISMNVQAAE-RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQ 75 A +Q+++ I FI K F+ +GAQ+A GV+ + +E VS QV Sbjct: 33 ANPPKAIQSSDMTIFFIVKASENEFWQIVLDGAQKAANHFGVEFIHQEATSESEVSRQVS 92 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 ++ ++ +AI+++ D L P ++RAM G+ V+ DS + ++ Sbjct: 93 ILETAISTNPDAIVLAPTVADALVPGIERAMDSGIPVIIIDSMANTDNYVSFLGS-DNYT 151 Query: 136 LGGMLVDMAARQVNKD----KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 +G D A+ + + KVA V + +I + +P E+V+ + Sbjct: 152 IGQRSADELAKALEEKNGSPSGKVAAITYMSGVGSLEARISGFLDRIEEAYPDIEVVSVR 211 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVM 251 ++ +L AY DLD + A + +A + + +A V Sbjct: 212 DAMGQVGNTINITLDLLTAYPDLDGLYANNQMTGDDMVRALDMQGRNDLAAVAVDASAQE 271 Query: 252 RPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 +E G + + G V A A++ + + +D G + ++P S+ Sbjct: 272 IWGLENGYLDSVLVQQPWVMGYAGV--AYAVMARNGVPLAKNVDT---GILVITPESLAS 326 Query: 312 YDYEADGNGIVLLPER 327 + +A N + Sbjct: 327 GEADAAINPFEYYKDW 342 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 9/314 (2%) Query: 8 KIALLSALGI-------AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + L++A G + + N ++++A +P + F+ S GAQ+ K+LG ++ Sbjct: 16 AVMLVTACGTGQIGQSGSGSAANSANSKKLALVPGVQAEPFYISMQCGAQEEAKKLGYEL 75 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T P + + Q ++N+ + A++V+ + +++ RG +++ D+ K Sbjct: 76 TVQAPQKFDATMQTSIVNSLGSNPPAALLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSLK 135 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + A+ G + A+ V V + + K + ++ K Sbjct: 136 DKSVAVSSVSSDNAEGGKLAAQTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDEL-K 194 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DK 239 HP + V QF N+ ++ L + DL I A + N AA N K Sbjct: 195 NHPNLKSVGIQFTQNEPEQAASKVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIGK 254 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V +VGF +++G + D Q G V A A L+ + + + Sbjct: 255 VNLVGFDASPSEVDGLKKGEYQALIAQDPAQIGTKGVDQAVAALEGKPTERDLTAQLHSI 314 Query: 300 GQVEVSPNSVQGYD 313 + ++ NS Y Sbjct: 315 TKDDLDANSKYFYK 328 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 3/293 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M L R +A + ++ +A+ IA I FF + GA+ KELG + Sbjct: 1 MKLTRRLTLAAFAGALALGTALPAFSADLIAIITPAHDNPFFKAEAVGAEAKAKELGYE- 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T + + Q ++I+ + +G AII+ D A+K+A G+ D + Sbjct: 60 TLLMTHDDDANKQSEMIDTAIGRGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREIN 119 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + G L ++ +K + T+ + I Sbjct: 120 ATGVAV-AQIVSNNYQGAQLGAQEFVKLMGEKGNYVELVGKESDTNAGIRSQGYHDVI-D 177 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 ++P + V Q T++ E IL+A D+ +I+ + A A + V Sbjct: 178 DYPDLKSVAKQSANWSQTEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRKDV 237 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 +VGF N +R ++ G +K L Q +++V ADA +K + +K Sbjct: 238 IVVGFDGSNDVRDSIKSGGIKATVLQPAYAQAQLAVEQADAYIKNKTTPKEEK 290 >UniRef50_UPI0001973330 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973330 Length = 325 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 119/285 (41%), Gaps = 8/285 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQV 74 G AA Q ++A I K FF S GA A E V + +GP +E + Q Sbjct: 24 GTAAHMSRRQERYQVAMIVKSTESAFFQSVFAGAGAAATEYNVSLITEGPESEEDYATQN 83 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++I V G +A+++SAV + A+ A +G+ V+ DSD + I GT Sbjct: 84 EMIYKAVENGADALVISAVDFNKNAEAVDWAAAKGIPVVVIDSDVNSSAVKFRI--GTDN 141 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT-QFG 193 + G + AA + + + Q + + + K+ EIVT Sbjct: 142 EEAGRMAARAALDGTDGELFIGIVNFDENTANGQQREQGFREEAKKDSRVKEIVTINVPS 201 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMR 252 D T++ +G+L + +++ I + A +L K D +++V F + V Sbjct: 202 AIDDTRA--ATKGLLSTHPEINVITTFNEWTSLGVGWAIRDLNKKDDISVVAFDSNAVSV 259 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 +E G V + + G + V A +L + ++ GDKLD + Sbjct: 260 GMLETGEVDALIVQNPYAMGYLGVEKAWEILSRRGVE-GDKLDTE 303 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 3/274 (1%) Query: 15 LGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQV 74 + IAF+ +VG F+ + GAQ+ LGV V GP + + Q Sbjct: 47 VTTVTAPPKASKNYNIAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQGPQKFDPTLQK 106 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++++ V +A++V+ + L++A G++V+ D+ T + + Sbjct: 107 PILDSIVASKPDALLVAPTDVQAMQMPLEQAAAAGIKVVLVDTTTN-DPSYAVSAIASDN 165 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 + GG A +Q++ + KV P ++ + K + +A++ PG+ V Q+ + Sbjct: 166 EGGGRAAFEAIKQLHPEGGKVMVMGLDPGISTTDARTKGFEEAVAED-PGFTYVGVQYSH 224 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRP 253 ND + Q L+ DL + A + +A + K+++VA+VGF Sbjct: 225 NDPATAAQLIGAQLQRDPDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQ 284 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 + GTV+ D GK V A L+ G Sbjct: 285 ALREGTVQALVAQDPGTIGKFGVDEAVTALEGGE 318 >UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY2_9FIRM Length = 324 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 5/282 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQ 75 +A + + ++A + K F+ + GA+ A E +D+T DGP TE Q + Sbjct: 23 SSAAQVPEENRYKVALVAKSTNTDFWKAVFVGAEAAATEYNMDLTIDGPETEEDYETQNR 82 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 +I V G A++ SA+ D PA++ A +GV+++ DS E + YI GT Sbjct: 83 MIAEAVENGAQALVFSAIDFDANAPAIEEAADKGVKIVVIDSAVNTEDVATYI--GTDNY 140 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + AA Q + KV + + A A+ EIV T Sbjct: 141 SAGQMAAEAALQGTEGTLKVGIVNYDVNSANGQDRERGAVDTFAESG-RAEIVATIHTLA 199 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPY 254 +A+ + + +L+ + +++A++A + AAQA E L + + +V F + V Sbjct: 200 EASSAQEDTRKMLQDHPEINALLAFNEPTSVGAAQAVEELHLQNALWMVAFDSNLVTIDA 259 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 ++ G V + + + G V A LL + +D Sbjct: 260 LQTGVVDALVIQNTYEMGYFGVQSAYKLLSGQRSEVEKHVDT 301 >UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F3L8_THELT Length = 321 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 13/293 (4%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG--VDVTYD 63 +K L+ A+ + +S V A IAF+ K F+ GA+ A +L V VT Sbjct: 1 MRKFLLVLAM-VFTLSALVFGAYEIAFVVKATDSDFWQYTIVGAKNAEHDLQGLVKVTVY 59 Query: 64 GP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP +E + QV ++ + + +AI++S+ S PAL +A Q+G++++ D+ Sbjct: 60 GPPSEADIDKQVAILEDVIRTKPDAIVISSTSSHATAPALNKAYQQGIKIILIDNFVYDT 119 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKD-----KAKVAFFYSSPTVTDQNQWVKEAKAK 177 ++ T ++GG L ++ K K KV S V A+ Sbjct: 120 GYHSFL--ATNNKVGGGLAAEKVVELLKKSGRPLKGKVGLISSMAGVQVLIDRDDGFTAR 177 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAEN-L 235 + + P EI+ T++ ND K+ AE ++ AY D L AI A + + A+ E Sbjct: 178 LKELAPDLEILPTRYVDNDIAKAAAAAEDLITAYGDQLVAIFADNNHTGDGVARVIEEQN 237 Query: 236 KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 DKV V + + + G++K + D G V A + ++ Sbjct: 238 LQDKVIAVAYDSDPQEVEALRNGSLKALIVQDPHGMGYKGVMFAFMAINGETL 290 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 114/297 (38%), Gaps = 9/297 (3%) Query: 9 IALLSALGIAAISM--NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 ++L LG S ++I + + FF S GA++ KELG ++ Sbjct: 13 ASILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLDSQ 72 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + + I + + G + +IV+ D + +++ A + + V+T D Sbjct: 73 N-DPAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVS 131 Query: 127 YINQGTPAQLGGMLVDMAA--RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 +I + GG L NK KV P + + K I K+ Sbjct: 132 HI--ASDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKK-SN 188 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 +++++Q D + L E I++A SD DA+ A + AA+A + N K+ +VG Sbjct: 189 LKLISSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKTA-NKKIIVVG 247 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 F + +E+ + G S+ A + ++ + ++ + + Sbjct: 248 FDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQNISKNIPVKLRLITK 304 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 12/294 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-T 61 + RFK + A+ S++V +AE A I K + F+ + G + K LGVDV Sbjct: 1 MKRFKTLKSCLAILGLVCSVSVYSAE-YAVILKTLSNPFWVAMKEGIENEAKALGVDVDI 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + P+E Q+QL + +N+ Y I + +SP L +A ++G+ ++ D Sbjct: 60 FASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDI 119 Query: 122 EC-------RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 + +I +GG ++ + +VA + A Sbjct: 120 KNLQKAKGNVEAFITT-DNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGA 178 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K ++V +Q D K+L A +L +L A + AQA N Sbjct: 179 REVFVKSSS-IKLVASQPADWDRIKALDVATNVLSRNPNLKAFYVANDTMAMGVAQAVIN 237 Query: 235 L-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 K K+ +VG R V + D G + + + G Sbjct: 238 AGKQGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGK 291 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 108/288 (37%), Gaps = 4/288 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M F K L + L A + + + IA I FF +G GA KELG D Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGYD- 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T + V+ Q QLI + + A+I+ D +L+R + G+ +D + Sbjct: 60 TLVASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREIN 119 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + G L ++ D + + T+ + I Sbjct: 120 KTGIAV-TQIVSNNFQGAQLAGEKFAELMGDGGEYVELLGPESDTNAQVRSEGFHD-ILD 177 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 P +++V Q T++ E IL+A ++ +I + + A A + V Sbjct: 178 NFPEFKMVARQSANWSQTEAFSRMESILQANPNIKGVITGNDSMALGAEAALQAAGRKDV 237 Query: 241 AIVGFSTPNVMRPYVERGT-VKEFGLWDVVQQGKISVYVADALLKKGS 287 IVGF + +R + +G+ +K + Q + AD ++ GS Sbjct: 238 FIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQADLYIRTGS 285 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 110/279 (39%), Gaps = 8/279 (2%) Query: 14 ALGIAAISMNVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SV 70 A + A S ++ + ++ + +GAQ+A +G ++ + GP + + Sbjct: 35 APSVPAESAADAPDDKLTFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDI 94 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ 130 GQV L+ N +N +AI+++ + D L +++AM G+ V+ DS + + +I Sbjct: 95 QGQVSLMENLINSKVDAILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYTSFI-- 152 Query: 131 GTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 T GG + + +V + + + + A+ A G ++ Sbjct: 153 ATDNVAGGRMAMERLIESIGGSGEVVVVNALAGIPSNDARGQGAEEYAATVD-GITVLPQ 211 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA-AENLKNDKVAIVGFSTPN 249 Q D +++ E ++ +L I A AAQA K ++ +V F Sbjct: 212 QHCL-DQAEAMTATENVIIGNPNLKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADA 270 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 +E GT+ + + GKI + A L + Sbjct: 271 DEIKLLEDGTIDALVVQQPYEMGKIGIEYAVKALNGEEV 309 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 108/297 (36%), Gaps = 13/297 (4%) Query: 7 KKIALLSALGI-----AAISMNVQAAE-RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + LL+A + A S + E I + FF S G ++ K+ G+ V Sbjct: 11 LSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIEKEAKKRGMKV 70 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + S Q + + + QG +A++++ + A++ A GV V+T D + Sbjct: 71 IIVD-AQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVPVVTIDRSAE 129 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + GG + AKVA P + + + Sbjct: 130 QGKVETLV--ASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRERGSGFHNIADQ 187 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 + ++VT Q D TK L E +L+ + D+ A+ A + A +A + D + Sbjct: 188 K---LQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKD-I 243 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 ++GF ++ + GK++ AD +L ++ +K Sbjct: 244 LVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKKVQKTISAPLK 300 >UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinobacteria (class) RepID=Q1AUT8_RUBXD Length = 351 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 4/277 (1%) Query: 37 VGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ-GYNAIIVSAVSP 95 +GF G ++A +ELGVD GP S QV + ++Q + + VS+ S Sbjct: 77 TSLGFANPIREGVEKAKRELGVDAELIGPANGSAQEQVSELQTLISQQKVDGLAVSSASN 136 Query: 96 DGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKV 155 D L P + +A G+ +++++++ + ++ Q Q G + +++ K KV Sbjct: 137 DALKPVIAQAYNAGIPIISFNTNNPGSKQMAFVGQ-DLVQSGRFEAEQLRKELGDRKGKV 195 Query: 156 AFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLD 215 F N +A + G +I N+ ++ + + A D Sbjct: 196 VVFSVDTGAGWSNDRFSGFEAGMEGAE-GIQIEGPINSGNEPRQAFNAVQNTMTANPDAI 254 Query: 216 AIIAPDANALPAAAQ-AAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKI 274 AI + D ++ AAA+ +N K ++ +VGF ++ G ++ + V+QG Sbjct: 255 AIASLDCCSVDAAAKWVQQNGKKGEIIVVGFDVLPQTADFIRNGVIQFTISQNPVEQGYQ 314 Query: 275 SVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 SV + + LKK K V + + ++G Sbjct: 315 SVKILNDFLKKNKPLRDVNTGTKLVDKSNIDEVPLEG 351 >UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF6_PAESJ Length = 327 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 110/282 (39%), Gaps = 5/282 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 +IA I + + F+ S GA +A + +++ Y GP + Q++L+ + + Sbjct: 48 RRQIALISQELDNPFWRSVEEGAMKAAGQYRMELQYMGPFRINAEEQMKLLEKAIASKMD 107 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II+ + + +++A + G+ V+T D+D R Y+ GT G + Sbjct: 108 GIIMQGIGSERDKALIEKANKLGIPVITVDTDEPGSKRLAYV--GTNNSFAGQEMGHLIA 165 Query: 147 QVNKDK--AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 + + + + S +Q ++ ++ I + G I + ++ Q A Sbjct: 166 EDGQKEPSGVIGVLVGSKEAANQRLRLEGFQSVI-NTYKGLSIAEVRASNISRLQAAQQA 224 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFG 264 E +LK + ++ ++ + A+A +K V I F + + ++ Sbjct: 225 EQMLKEHPEITYMVGFSSLDGIGMAEAVARVKPGGVTIFAFDDLEDTLAAIRKKQIEASI 284 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + Q G ++ + + + + + I + EVS Sbjct: 285 VQQPTQMGYEAISLLNQYSQGQDVTSKQYTPISVITDKEVSA 326 >UniRef50_A9D042 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D042_9RHIZ Length = 331 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 8/269 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ 75 ++ +M A + F+ + V F+ N + + +G+ T+ GP + + Q + Sbjct: 28 ALSTEAMAQAAGKEYVFLSIVTQVPFWVDYRNAMKDLEELMGIKATFTGPLDFDTAAQAR 87 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 ++ + + I++ P L P ++RA++ G+ V D RS ++ G Sbjct: 88 QLDELIARRPAGILIFPGDPATLAPGVERAVEAGIPVTCCIGDIPNSPRSTFL--GINGV 145 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + Q K KV + + V+ K A+++P E+V Sbjct: 146 QAGRVGGEMLAQAIGGKGKV--ILGTFPAPSTLERVEGYKQIFAEKYPEIEVVDVVNDKA 203 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D + + ++A D+ I D ++ AA A + IV + M PY+ Sbjct: 204 DPSYAPTAYLQSIQANPDIVGIGGTDGDSGKGAAIAVNEAGRKDIKIVAMDRNDDMLPYI 263 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLK 284 E GT+ + + +++A ++ Sbjct: 264 EDGTIYGAVAQ----KSYLEIFLAFHMMH 288 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 108/302 (35%), Gaps = 12/302 (3%) Query: 1 MTLHRFKKIALLSALGI-----AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKE 55 +T+ + LSA + A + +I + FF S NG + K+ Sbjct: 5 LTVFTALALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVVKEAKK 64 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 G++V + + Q + + + QG +A++++ + A++ A G+ V+T Sbjct: 65 QGIEVIVVDAQD-DSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLGIPVVTL 123 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 D + + + GG + + AKVA P + + Sbjct: 124 DRSAENGKVETLV--ASDNVKGGQMAADFIVEQLGKGAKVAELEGVPGASATRERGSGFH 181 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 + ++ Q D TK L E +L+ D+ A+ A + A +A + Sbjct: 182 KTADDK---LNVIAKQTADFDRTKGLNVMENLLQGNPDIQAVFAHNDEMALGAIEAIRSS 238 Query: 236 KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 ++ +VGF V+ G + GK++V A +L ++ Sbjct: 239 GK-EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVEKTIPAP 297 Query: 296 IK 297 +K Sbjct: 298 LK 299 >UniRef50_A6TS00 Periplasmic sugar-binding protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TS00_ALKMQ Length = 337 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 7/276 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 F+ + ++ GA+QA ++ V V ++ P S +++ ++ + Sbjct: 47 PRYHFYFVGQNAVDPYWKEIRQGAEQAARDHNVVVEFNAPRFYSPEEELKYLDIAILSEV 106 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 + II S + + +A G+ V+T ++D K R+ ++ GT L G Sbjct: 107 DGIITHVSSGEDFTTMINKAYYGGIPVVTVENDDKISNRAAFV--GTNGFLLGTEAGKLM 164 Query: 146 RQVNKDKAKVAFFYSS---PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 + KA +A S+ P QN + +++ KE+P E+V T + + Sbjct: 165 VEATGGKANIAIIVSNNFEPDAASQNIRINGFLSEL-KEYPDMEVVQTYTSRMGILSAEE 223 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQ-AAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 + IL D+DAI + + Q + K ++ ++GF Y+E+G + Sbjct: 224 ITQSILNGGKDIDAIFTMTSVDTLGSVQLIIDQNKVGEITMIGFGDAESTLRYIEKGIIY 283 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + D + G SV + +K ++ + +K Sbjct: 284 GTVMSDPYRMGYESVQALIDIKEKNNVSSFIDTGVK 319 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 100/283 (35%), Gaps = 11/283 (3%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLIN 78 +S + AA A + K + F+ G + K LGV V + P+E Q+QL Sbjct: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-------RSYYINQG 131 + N+ Y I + +S L + RA ++G+ ++ D + ++ Sbjct: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT- 135 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 +G ++ + +VA A K ++V +Q Sbjct: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQ 194 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNV 250 D K+L A +L+ ++ AI + AQA N K KV +VG Sbjct: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 R VE G + + G + + K G + DK Sbjct: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 6/300 (2%) Query: 4 HRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 H + L +AL + S + A + IA + + FF + +GA+ ELG + Sbjct: 6 HHKVSVLLSAALLSVSTSFSASAQDAIAIVLSTMNNPFFVTMKDGAEAKAAELGYKLIAL 65 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 S ++ + + +G AI+++ + A++ A + + VLT D Sbjct: 66 DSQN-DPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRTAAHGD 124 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 +I + GG L Q AKV + + + + Sbjct: 125 IVSHI--ASDNIAGGELAGEFIAQQLGKNAKVIQLEGIAGTSAARERGEGFSNAVTAN-- 180 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIV 243 +E++++Q D +K L E +L A D+ A+ A + A +A E D + ++ Sbjct: 181 NFELLSSQPADFDRSKGLNVMENMLAANGDVQAVFAQNDEMALGALRAIEAAGKD-ILVI 239 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 GF + V R + G ++ AD +LK ++ + +K + Q + Sbjct: 240 GFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKGQVVEKSIPVALKIITQTQ 299 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 97/276 (35%), Gaps = 4/276 (1%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 I FF + GA++ ++ G+ + + + Q+ I + + + Sbjct: 38 GKPAIGLAVSTQSNPFFVTLKKGAEEEAQKQGLTLITVDAQD-DPAKQIASIEDLIQKKV 96 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 I+V+ D + A+K A G+ V+T D + ++ + GG + Sbjct: 97 KVILVNPTDSDAVVGAVKAANAAGIPVVTLDRSVNGGEVASHV--ASDNVAGGKMAAEYL 154 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 + ++ V P + + + I + ++V Q D K L E Sbjct: 155 LEKIGNQGDVVELEGIPGASAARERGQGFHDVI-DQAKDVKVVGRQPADFDRAKGLSVME 213 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL+A ++ + A + A QA E V +VGF + V+ G + Sbjct: 214 NILQANKNVKGVFAHNDEMALGAVQALEAAGMKDVTVVGFDATDDAVNAVKAGKMSATVA 273 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 GK +V A ++ + + + V Q Sbjct: 274 QKPKLIGKTAVDAAKKIIDGQPVDKSLPVPLDLVKQ 309 >UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK42_CLOPH Length = 320 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 10/297 (3%) Query: 3 LHRFKKIALLSALGIA-----AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 ++ FKKI + LG+ + S +A I K F+ S GA A E Sbjct: 1 MNTFKKIVVWILLGVMLITLVSCSNKDNKKHYVAMITKSTKSAFWQSVFAGASAAATEYN 60 Query: 58 VDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 + ++Y GP E Q LI + G A+I SAV + A++ A ++G++V+ D Sbjct: 61 LSISYAGPELEEDYEYQNDLIYQAIEDGAEAVIFSAVDYNANAKAIEDAAKKGLKVIIID 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SD + I GT G + AA +++K + + Q + Sbjct: 121 SDVNSNQVTCRI--GTDNYAAGCMAGEAALASSEEKIHIGIVNYDINSANGQQREDGFRE 178 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 ++K+ +IVT + + + + +L+ + +++ I + A +L Sbjct: 179 IVSKDSRVIDIVTI-NVVSTTEDARKGTKQLLEEHPEINVIATFNEWTSLGVGWAIRDLN 237 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 D+ +V F + V +E G V + + G + V L++ S++ G Sbjct: 238 LADETTVVAFDSNVVSVGMLETGEVDALIVQNPYAMGYLGVEKVAELIRGQSIEKGT 294 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 120/288 (41%), Gaps = 11/288 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIP----KLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 + +++ +GI + + + + + I K + F+ G + A E G +VT G Sbjct: 17 LIVVAVVGIYKWAASQRTEKTVDIIVTVKAKSSAIDFWKVLITGVEDAANEFGANVTVIG 76 Query: 65 P-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 P +E + Q + + + Q +AI+++A + L P ++ ++ G++++T DS + Sbjct: 77 PPSETEIDTQTEQLKQAIRQKPDAIVMAATDYNRLVPVAQQIVKAGIKLITVDSRINSDD 136 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKD--KAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 +I T G ++ + +KVA + Q + K + + + Sbjct: 137 ALSFI--ATDNIAAGEKAGEEMAKLLPESSSSKVAIMSYVYGTSSQLEREKGVRQWL-EG 193 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKV 240 H E+ +T + K+ + + +L + I+ + + A +A +L + KV Sbjct: 194 HSHIEVASTLYSEGRLEKAYELTKELLSEDPGIKGIVGLNEPSTVGAGRAIRDLGLSGKV 253 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 +VGF + +E G ++ + G +SV A ++ + Sbjct: 254 KLVGFDSSVDEVKLIEGGVLQATIVQKPYNMGYLSVKTAIEAVRGKKV 301 >UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW07_CLOB8 Length = 326 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 4/264 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 +I I + ++ GA++A KE G V + GPT S ++L + + + Sbjct: 38 KPKIVLISHIKTNPYWLDIKAGAERAAKERGAVVEFLGPTTASTEDGLKLFDMATSAKVS 97 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II + AM++G+ V+T DSD + R Y+ GT L G + Sbjct: 98 GIITYVQEEGQYKKKINSAMEKGIPVVTIDSDEEDSNRIAYV--GTDNVLAGQVAGKEMV 155 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 + VA V +Q + V+ I K + +IV T ++ Sbjct: 156 KQIGTSGNVAIVMGGKNVKNQKERVEGFTQYI-KSNSNLKIVDTDSSDAMLLEAEIITRK 214 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL +++A+ A AA+A ++L D+V I+ F + + G V + Sbjct: 215 ILNRNDNINALFCTSALDGIGAARAVKDLNYKDRVKIICFDDLDDTLSNIRNGLVSATIV 274 Query: 266 WDVVQQGKISVYVADALLKKGSMK 289 + G +V + ++ S K Sbjct: 275 QKSNEMGYRAVNIIMDKIEGKSNK 298 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 9/287 (3%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 + I + FF G ++ KELGV V + P + V+ Q I +F+ Q Sbjct: 39 KKDLTIGVSTITLQHQFFIDIDEGIKEKAKELGVKVIVNDPDQ-DVAKQTSAIEDFIQQN 97 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 + +IV + PA++ A ++ + V+T D+ E + Y+ + G L + Sbjct: 98 VDGMIVLGTDNSAIVPAVEGAFEK-MPVVTVDAVLNTENITSYVGTVS-YDAGKKLGEYT 155 Query: 145 ARQV---NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 + + K+++A Q Q + K + K +I+ +Q GY D +SL Sbjct: 156 KKYIDEKLGGKSEIAIVT-DLKSQIQMQRIDGFKDAL-KGSANVKILNSQPGY-DREESL 212 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 T E ++++ D+D I A N++ A A E+ KN V IVGF + GT+ Sbjct: 213 NTVENLIQSNPDVDIIYATAENSVLGAKAALESAKNKDVKIVGFDLTEEASSGITDGTIL 272 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + G+++V +K ++ + + + Sbjct: 273 AMIQQQPKEMGRLAVEAVVKAIKGEKVEKNIPVPALLYDKENIKDFK 319 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 100/259 (38%), Gaps = 6/259 (2%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I +F S N + KE +T + + Q+ + NF++Q +AI+ Sbjct: 51 IGVSISTTNNPYFVSMNNAIKSMAKEKNTKLTVSD-AQNDSATQLNNVQNFISQNVDAIL 109 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 ++ V D + PA+K A + V+ D + + + G + A ++ Sbjct: 110 INPVDSDAIVPAIKAANNAHIPVIAMDRGSNGGTVLTTV--ASDNVAAGKMAAQAVEKLV 167 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 KV +P + K ++ G I+++Q D T L T + +L+ Sbjct: 168 GKNVKVLELSGTPGASATIDRGKGFNSEAKTL--GLNILSSQSANFDRTTGLNTTQNMLQ 225 Query: 210 AYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVV 269 ++ D+ AI A + AA+A + K+AI G + ++ GT+ Sbjct: 226 SHKDVQAIFAQNDEMALGAAKAVQATGQ-KIAIFGIDGESETHDAIKAGTMTATIAQQPA 284 Query: 270 QQGKISVYVADALLKKGSM 288 + G++++ + + Sbjct: 285 KIGEMALQATYDYYQGKKI 303 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 102/271 (37%), Gaps = 9/271 (3%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGY 85 A +IA + K + FF GA++A KELG+D+ E S+ Q+Q+I + + + Sbjct: 48 ARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLIRMKF 107 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS------YYINQGTPAQLGGM 139 +AI+++ L P LK A + G+R++ D+ E + Sbjct: 108 DAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDNEKAAYE 167 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 AR+++K A+ A + + Q A + +E+P +V + + Sbjct: 168 SAGFIAREIHK-PAQAAILEGIRSADNSRQRRVGA-ERAFRENPLIRLVARESANWKIDE 225 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 + + D+ + + A Q + V + + + + G Sbjct: 226 GRDVTRRLFSDHPDITLLFCANDMMALGAIQFLQESGRYGVKVAAYDALEEAKRAILSGR 285 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 ++ +QG + +A +L ++ Sbjct: 286 MEVTVNQQAAEQGYQGIILASRVLNGEAVPE 316 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 18/329 (5%) Query: 2 TLHRFKKIAL-------LSALGIAAISMNVQAAE------RIAFIPKLVGVGFFTSGGNG 48 FK +AL L+A G + S + ++A+ +I + K F+ S G Sbjct: 1 MRTSFKVLALGAIACLSLTACGSSPASSDGKSADAKSNSKKIILVSKGFQHTFWQSVKKG 60 Query: 49 AQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 A + GKELG +V + GP E +V+ Q+ + N +N AI ++A+ P L++ Sbjct: 61 ALEKGKELGYEVEFIGPKNETAVTEQLDQLKNALNAKPAAIGLAALDSKAAEPILQQIKN 120 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 G+ V+ +DS + + T + G Q+ +K V T Sbjct: 121 AGIPVIAFDSGVDSDIPLTTVQ--TDNRTAGAKAAEKLAQLMGNKGTVGIVCHGQATTTG 178 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 + + + P +++ Q+ ++ K+ A+ I+K+ +D+ A+ + Sbjct: 179 KGRCFGFQDWMKEHAPDIKLLQEQWA-DERGKAADAAKAIVKSNTDVTAMYGSNEVTAAG 237 Query: 228 AAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG 286 Q + ++ IVGF + ++ G V+ G +V AD +K Sbjct: 238 VLQGVKEAGKMGQITIVGFDSGKAQIDAIKSGDEAGAITQAPVKMGAETVAAADKAIKGE 297 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 S++ + + +Q YE Sbjct: 298 SLEKIIDSGFAWYDKSNIDTPEIQSNIYE 326 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 115/308 (37%), Gaps = 23/308 (7%) Query: 1 MTLHRFKKIALLSALGIAA----------ISMNVQAAE---RIAFIPKLVGVGFFTSGGN 47 M + + LL + G A + Q AE IA + K + F+ Sbjct: 5 MKIFLLLTMFLLVSCGGAKEEAKTEDGNEPAKTEQKAEGQAEIAIVLKTLSNPFWVEMKE 64 Query: 48 GAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 G ++ G+ V +E V Q++LI N +++GY AI ++ +SP PA+ A Sbjct: 65 GIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKAIGIAPLSPVNTIPAIVEAN 124 Query: 107 QRGVRVLTWDSDTKPE------CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 ++G+ V+ D E ++G + ++ + +VA Sbjct: 125 KKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKGAEYIIGKL-PEGGEVAIIEG 183 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP 220 + A + +++V +Q D +K+L A +++ Y +L AI A Sbjct: 184 KSGNASGEFRRQGATEAFKAD-SKFKLVASQPADWDRSKALDVAANLIQKYPNLKAIYAC 242 Query: 221 DANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVA 279 + A QA N K ++ +VG R ++ G + D G S+ + Sbjct: 243 NDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKLNATVAQDPAMIGATSLKIL 302 Query: 280 DALLKKGS 287 +K Sbjct: 303 IEAIKDKP 310 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 105/288 (36%), Gaps = 4/288 (1%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 + +A+ I F FF AQ+ ELG+ + + + + Q + N Sbjct: 41 TTGSASAKTITFALSTQANPFFVQMRESAQKKADELGLAINFQDAAD-DSATQSNQLANA 99 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 G +I++ D + PA+++ + + V+ D + YI + + GG Sbjct: 100 AASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVNNANVASYI--ASDNETGGKQ 157 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + ++ + + K + K++P ++V Q + K Sbjct: 158 AAKVLSDAINGEGEILVLQGKTGSSASRERGKGFDEGL-KDNPNIKVVAKQTAEFERAKG 216 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 L +L+A+ ++ AI A + A +A + V ++GF ++ G + Sbjct: 217 LDVTTNLLQAHPNVKAIFAENDEMALGAIEALGSKAGKDVKVIGFDGAEDALKAIKDGRM 276 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 V+ + +V A LLK + ++++ + V S Sbjct: 277 YASIAQQPVKMAEQAVIEASKLLKGETATKKMQVEVVAATKENVDKFS 324 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 116/284 (40%), Gaps = 7/284 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDVTYDGPTEP-SVSGQV 74 + + +IAFI K + FF + A++ G++ + V P P ++ Q+ Sbjct: 44 GGQTASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQI 103 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 QL+ + +AI+++ +G+ PA+K+A G+ V+T ++ Y+ G Sbjct: 104 QLVEQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKANGGDIVSYV--GAQN 161 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 G + A + + KV + + + K + KE+PG E++ +Q Sbjct: 162 FDVGYSLATALFEKLGGQGKVILIEGKAGNSTSEERAEGFKEAL-KEYPGIELLASQPAD 220 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPNVMRP 253 D ++ E L+ Y +D ++ + +A ++ DK + + F + + Sbjct: 221 WDRASAMTVMENCLQTYDQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDVIS 280 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 ++ G + G + Q I++ A L + + + I Sbjct: 281 ALKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMPIT 324 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 104/292 (35%), Gaps = 17/292 (5%) Query: 8 KIALLSALGIAAISMNVQAAERI----------AFIPKLVGVGFFTSGGNGAQQAGKELG 57 + L+A G +S + ++ + FF S NG Q K+ Sbjct: 18 ALFTLTACGGTGLSSKSDSNTKVTKKAPKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKNK 77 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 +V + + Q I + + + + +I++ V + PA+K A G+ V+T D Sbjct: 78 TNVQVSD-AQNDTAKQNSNIEDLIQKKVDVLIINPVDSSAITPAVKDANDAGIPVITVDR 136 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + + + GG + + AK+A P + + K Sbjct: 137 SSDGGKVLTLV--ASNSTKGGQMAAKYMIEKLGKDAKIAELQGIPGASATRERGKGFDGA 194 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 + +IV+ Q D K L E IL+ D+ I + + A QA + Sbjct: 195 AKGK---LDIVSKQTAGFDRAKGLTVTENILQGNGDIVGIFSQNDEMALGAVQAVKAAGK 251 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 K+ IVGF V+ G + + G++++ A ++K Sbjct: 252 -KITIVGFDGEADGIKAVKAGDMAATVAQKPEEMGRLALQAAYDHFNGKTVK 302 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 102/281 (36%), Gaps = 5/281 (1%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 I FF +G Q+A E G+++ Y + + Q++ + N + + Sbjct: 64 KKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIEL-YITDAQDDPTIQMKDVENLITKKP 122 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +AII+ D + +++ + G+ V T D + +I G A G + Sbjct: 123 DAIIIDTCDSDAIVSSIEACNEAGIPVFTMDREANGGEVISHI--GYDAIKSGRMAGQYL 180 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 K K+ + + K++P EIV Q D K + E Sbjct: 181 VDTLGGKGKIVEIQGIMGTNVAQNRSQGFNEVM-KDNPDMEIVACQVADFDRAKGMSVME 239 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFG 264 IL+A ++D + A + L A +A E D++ +G + ++ G V Sbjct: 240 NILQANPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMKAGKVDATI 299 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 GK + A L+ ++ LD + V Q V Sbjct: 300 AEPPFFLGKAILNTAYDYLEGKQVEPYVILDNQLVTQDTVD 340 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 3/262 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYN 86 ++I I K F+ + GA+Q+G + G+ V+ GPT E ++ QVQL+ N +++G + Sbjct: 49 KKIDVIIKASDSSFWQTMIAGAKQSGGDFGLKVSTFGPTSETNIDQQVQLVENSISRGVD 108 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL-GGMLVDMAA 145 ++++ S L A++RA + G++V+T DS + A + G + Sbjct: 109 GLVIAPNSSSALNSAIERARKAGLKVITVDSRVTTASEGFIGTDNLKAGMQAGKRMCELL 168 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 + NK V S + K +A P ++ ++ ND + Sbjct: 169 KAQNKTSGSVMIESSVAGIQSLVDRDSGFKQGLANNCPQVKVTLQRYNNNDINTAASQVN 228 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFG 264 L A +L + A + + AA+A ++ D V +V F + + GT+ Sbjct: 229 DALTANRELAGVFADNNTSGVGAARAIQDNNVTDTVPVVAFDSDPQENAALAAGTIDALV 288 Query: 265 LWDVVQQGKISVYVADALLKKG 286 + + G V A Sbjct: 289 VQNPYFFGYQGVLAAGMAAAGR 310 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 110/294 (37%), Gaps = 17/294 (5%) Query: 10 ALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 A+L+ G S++ + + + + FF G + E+G + + Sbjct: 20 AILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGMEKGVKDKTSEIGCKLI-ETN 78 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 ++ Q+ I + + + + +IV+A+ D + PA+K+A + + ++ D E + Sbjct: 79 ANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKAKEANIPIIFLDRGANSEDMT 138 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKD---KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 ++ ++G ++ + + V + K + K H Sbjct: 139 TFLET-DNVKMGEQAAELILKALKDKGLNGGNVVEIEGLQGTSAARDRGKGFHNVMDK-H 196 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK--- 239 +IV Q G + KS+ + IL+A +DA+ + + A +A K Sbjct: 197 KEVKIVAKQAGDFNQEKSMNVMQNILQANPKIDAVFGHNDDCTVGAEKAIIASNRMKPAG 256 Query: 240 ----VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 + +VG N V++G + D + G +V V +K ++ Sbjct: 257 DKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIGMGVQAVEVGLKAIKGEQVE 310 >UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic component n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZL4_HALOH Length = 318 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 20/290 (6%) Query: 14 ALGIAAISMNVQAAE------RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 + ++S++V A + IAF+PK + F AQ+ + LGV + + P Sbjct: 2 VVCPLSLSLSVSAGKLPPKPLTIAFVPKSLDNPIFLDTLEAAQKEARRLGVRLEWVAPFT 61 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 S GQ++++ N + + + II+SA + L + +A++ G+ V T+DSD R +Y Sbjct: 62 TSTEGQIKVVKNLIQRRVDGIIISANDSNALKEIINKAVKSGIAVATFDSDVPGSDRLFY 121 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKA------KVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + GT G + A QV K K KV + + VK + +E Sbjct: 122 V--GTDNWRAGYELGKALLQVLKRKGIKTEKYKVMVLSGGKEALNLKKRVKGFAKAVEEE 179 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA----NALPAAAQAAENLKN 237 EI + +D + + E +K++ D+D I+ A + + + Sbjct: 180 -IDIEIKDILYCNDDFQLANELVENYIKSHPDIDIILFVGGWPFYVPPDAMPRFQKWARQ 238 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 +AI G + G ++ D G++S+ L+ G Sbjct: 239 GGIAI-GIDIFYSALVLQKEGMIQYLVGQDFSGMGQLSLRYLVRFLRSGQ 287 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 106/307 (34%), Gaps = 9/307 (2%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKL--VGVGFFTSGGNGAQQAGKELGVDVTYD 63 K + L A +A I + A+ + K G F+ S GA++ ELGV + Sbjct: 1 MKLVKLFLASSLAIIIGTLAFADTVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVVL 60 Query: 64 GP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P E V Q+ + + + +G AI ++ P+ L ++ A G+ V+ D+ + Sbjct: 61 SPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTKGINK 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 ++ GT + G + + VA T + A A + Sbjct: 121 GVTFI---GTDNKAGAKMAADFICDRVSRGSDVAILQGIITQSTGKARADGAHAGLKGC- 176 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVA 241 G IV Q D + E IL L A+ A + N A +A ++ + V Sbjct: 177 -GLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKDADMLNDVI 235 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 +VGF + G + G V A L K S+ V + Sbjct: 236 VVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKGRSLPPVVDTGTLLVTK 295 Query: 302 VEVSPNS 308 + Sbjct: 296 KNAADFK 302 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 9/266 (3%) Query: 23 NVQAAERI--AFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 A++I + + FF G +A ++ G +V + + + Q+ LI NF Sbjct: 53 PAGGADKIVCGVVLIDMTNQFFVDMIEGGNKAAEDYGCEVIWK-SADGNFDNQISLIENF 111 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + QG + I+V + +GL P +++A G+ +T E + Y + ++ Sbjct: 112 IEQGVDCILVDPLDSEGLKPVIEKASAAGIPTITMAGQVDVE--TNYTTVYNDEENTRII 169 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 +M A+ + ++ K A Y + + K A + +++P +V Q D Sbjct: 170 AEMTAKMIGEE-GKTALLYGNKGNLVSDLRQKGYYAGM-EKYPNITVVE-QPTNWDPPTG 226 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAE-NLKNDKVAIVGFSTPNVMRPYVERGT 259 ++ A+ ++ A DL AI AA QA + K ++ + + + VE G Sbjct: 227 MKAAQDLIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDALKAVESGQ 286 Query: 260 VKEFGLWDVVQQGKISVYVADALLKK 285 L + G ++ VA L Sbjct: 287 FTSTVLTGAKKTGYWNIQVALQLASG 312 >UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and transport protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C56B8 Length = 349 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 15/317 (4%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG------VDVTY 62 + L + L IA+ I IPK + + S GA++ +L V V + Sbjct: 8 LLLAAVLPIASGCARRGEEYTIVVIPKGLSHEHWQSVRRGAERCAADLEAEDGTRVRVIF 67 Query: 63 DGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 DGP E Q+++++ V G +A++++ + +KRA GV V+ DS Sbjct: 68 DGPLRERDALEQIRIVDRRVATGASALVLAPQHSATMTACVKRAADAGVPVVIIDSGLD- 126 Query: 122 ECRSYYINQGTPAQLGGMLVDM-AARQVN---KDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + T GG L R++ KDK K+ F + + + + Sbjct: 127 DPNHFVKYVATDNYNGGRLAGRHLIRELQRRRKDKPKLILFRYAVGSQATEDRERGFEDE 186 Query: 178 IAKEHPGWEIVTT-QFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENL 235 + + PG E ++T ++ +++ A ++ + + +D I AP+ ++ A Sbjct: 187 VKERCPGAEWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNESSASGTADVLRAQ 246 Query: 236 K-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 N KVA++ F + +++G V L D + G +S + L+ M G + Sbjct: 247 GLNQKVALMAFDGSKPLLQSIQQGDVIGSILQDPYRMGYLSAWYCVRHLRGEDMNNGRRE 306 Query: 295 DIKGVGQVEVSPNSVQG 311 +G G+ ++ +V Sbjct: 307 MSEGTGEYLITAENVTS 323 >UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK8_9CLOT Length = 329 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 105/292 (35%), Gaps = 4/292 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 +I I + ++ GA++A K+ + + GP S ++ IN + Sbjct: 39 KPKITLISHVYSNPYWKYIKLGAEKAAKQRNAVIDFQGPDTASAGEGIKFINMAYAAKVS 98 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II P + + + G+ ++T DSD + R Y+ GT G + Sbjct: 99 GIITYVQDEAMYKPVIDKVLAGGIPIVTVDSDAENSKRLAYV--GTDNVTAGRVGAKEMI 156 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 V V +Q + V I K + I + + ++ + Sbjct: 157 HHVGIYGNVGIIMGGKNVKNQIERVNGFTEYI-KSNSKLNISEIESSDSYLLEAELATKK 215 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL D+ A+ A AA+A ++ +KV I+ F Y++ GT+ + Sbjct: 216 ILINNKDIKAVFCTSALDGQGAAKALISMGAAEKVKIICFDDLPETLDYIKNGTITSTIV 275 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 D G +V + +++ K D+ V + + +Y+++ Sbjct: 276 QDPYGMGYKAVNIIMDIMEGKDTKGVFLTDVIVVSKDNIDEFKKTRGEYDSE 327 >UniRef50_C7PZQ0 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZQ0_CATAD Length = 382 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 10/283 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD---VTYDGP 65 +A L A A++ ++ IA + + ++ +G G Q+ +LG+ TY P Sbjct: 61 LAKLDAALKTALAGKDLSSVNIAMVVNVAA-DYWKAGQVGFQKGCSDLGLSGSHCTYFAP 119 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 ++ Q + +QG +SA+ P + +Q GV VL DS + Sbjct: 120 PNGKLTEQNSEMETLRSQGITGYAISAIDPTSAAGTIHTDVQHGVSVLAIDSPLPG-TDA 178 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 + GTP G A +QV K KVA S T + Q ++ + + Sbjct: 179 ASLYLGTPNYTAGQQAGEAMKQVLGGKGKVAVLVGSLTAANATQRIQGFEDALKG--SNI 236 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVG 244 +V A + AE IL D++ + + PA AQA ++ K + V IV Sbjct: 237 TVVQKVNDNLSAATATSDAETILANNPDVNGLYGVYSYDGPALAQAVQSAGKTNSVHIVS 296 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVY--VADALLKK 285 + +++ G + + QQG Y AD +L K Sbjct: 297 DDSDAQTLGFIKSGVISGTVVQMPYQQGYTGAYILAADKVLGK 339 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 105/293 (35%), Gaps = 4/293 (1%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + K L +AL A + IA I FF + GA+ ELG T Sbjct: 1 MKNTLLKSCLTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYT-T 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + V+ Q QLI + + AII+ D LK+A G+ D + Sbjct: 60 LVASHDDDVNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREIN- 118 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 E + G L + K K + T+ + + I E Sbjct: 119 ETGIAVSQIVSNNYQGAQLGAEKFVTLMGGKGKYIELLGRESDTNAHVRSQGYHDVI-DE 177 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 H ++V Q T++ E IL+A D+ +I+ + A A + + V Sbjct: 178 HSDMKMVAQQTANWSQTEAFNRMESILQANPDITGVISGNDTMALGAEAALKAAGRNDVV 237 Query: 242 IVGFSTPNVMRPY-VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 +VGF + +R + G +K L Q +++V AD LK G +K Sbjct: 238 VVGFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKTGLEEK 290 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 9/274 (3%) Query: 38 GVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDG 97 F+ ++A + GV++ + ++ Q+ + +F+ +G +AI++S V G Sbjct: 39 QHPFYVQLKQAMEKAADDNGVELIVSIANQ-DLNKQISDVEDFIVRGVDAIVLSPVDSKG 97 Query: 98 LCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAF 157 + A+ +A + G+ V+T D + ++ T GG + +V K +VA Sbjct: 98 VVGAIIKAKRAGIPVITVDISAEGVEVDAHV--ATDNYYGGRIAGETMAKVLNGKGQVAI 155 Query: 158 FYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAI 217 P V V K ++K +PG EIV Q G ++L TA+ IL+A+ ++D I Sbjct: 156 IDY-PVVQSVRDRVAGFKEAVSK-YPGIEIVAIQPGIT-RPEALNTAQNILQAHPEVDGI 212 Query: 218 IAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVER-GTVKEFGLWDVVQQGKIS 275 +A A+ A ++ D V ++GF R V++ + + G++ Sbjct: 213 FGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKKEESFVAVVCQYPGEMGRLG 272 Query: 276 VYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 + A ++K ++ + + G+ E V Sbjct: 273 LETALRVIKGEKVEKEIPV-LPGLFTKEGEQKKV 305 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 108/307 (35%), Gaps = 13/307 (4%) Query: 6 FKKIALLSALGIAA---ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 F + LL+ G + +S +I + K + FF GA++ ++ + Sbjct: 28 FTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQNATRFDF 87 Query: 63 DGP---TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 E + Q+ VN+ Y+ I+++ L + +A++ G+ V+ D Sbjct: 88 TATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVAL 147 Query: 120 KPECRSY----YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + G + G + + KVA +P + Q Sbjct: 148 DEATKKAAGIDLAFFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFD 207 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 IA +V + G+ + ++ LK Y DL I+ + + A QA E Sbjct: 208 DAIADGS--LNLVVAESGHWETSEGQSITAAWLKKYPDLQGIMCANDSMAFGAVQALEAA 265 Query: 236 K-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 DK+ +VGF ++P ++ G + Q I + LK + Sbjct: 266 NLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFSGWIRT 325 Query: 295 DIKGVGQ 301 ++K + + Sbjct: 326 ELKLITK 332 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 10/266 (3%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGK--ELGVDVTYDG-PTEPSVSGQVQLINNFVNQ 83 ++A + K + FF + NGA++ K D+ +G E + Q++++ + Sbjct: 35 KPKVALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVEQMIVS 94 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY----YINQGTPAQLGGM 139 +AI+++ L P +K+A+ G+ V+ D+ P+ G + G Sbjct: 95 KVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNVPFVGPDNRKGAR 154 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 +V + K V PT T+ Q + + G ++V+ Q G + K Sbjct: 155 MVGDYLAKRLKAGDAVGIVEGVPTTTNAQQRTAGFQDAMKAA--GAKVVSVQSGEWEIDK 212 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERG 258 A +L Y +L A++ + N A A KV +VG+ N ++P ++ G Sbjct: 213 GNAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIKPMLKDG 272 Query: 259 TVKEFGLWDVVQQGKISVYVADALLK 284 V +Q + A L Sbjct: 273 RVLATADQYAAKQAVFGIDTALKALA 298 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 106/318 (33%), Gaps = 9/318 (2%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 R + +A ++ IA + K F+ + G + A ++ V++ Sbjct: 2 RLLTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLILQA 61 Query: 65 -PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 +E V Q+ N + + A++V+A++ L P LK+A Q+ + ++ D + P Sbjct: 62 VASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDPAV 121 Query: 124 ------RSYYINQGTPAQLGGMLVDMAARQVNKD-KAKVAFFYSSPTVTDQNQWVKEAKA 176 + + + G + ++ + KV Sbjct: 122 LQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGFTE 181 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 ++ + P +IV T G D K+ L+ + DL AI + A +A Sbjct: 182 RLKQIAPNAQIVATLPGDWDRLKAANITNDTLQRHPDLAAIYCANDTMALGAVEAVFAAG 241 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 KV +VG + + G + G ++ ++K + + Sbjct: 242 K-KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVDPKIIVPT 300 Query: 297 KGVGQVEVSPNSVQGYDY 314 + + + N Y Sbjct: 301 LVIDKAILEANRDPLLQY 318 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 100/302 (33%), Gaps = 9/302 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQ 83 + I F + + N QQA LG+ G SV Q+ +I N+V+Q Sbjct: 78 YSKYTIGFCGMTLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTIIENYVSQ 137 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ----GTPAQLGGM 139 G + II+ + +GL AL+ + V+ D+ GT +GG Sbjct: 138 GVDGIILVPAASEGLISALQECESANIPVINLDTKLDDSTLKTLGKDIPFYGTDNYVGGQ 197 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 LV Q+ D K A T+ + K ++V Q + + Sbjct: 198 LVGEEVAQMYPDGCKTAILRGVQGQTNDDDRYNGFLDKAGD---VVDLVAEQHANWETDQ 254 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERG 258 + I++A DL I + A QA + D++ I + YV G Sbjct: 255 GYTAIQNIIQANKDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEGLQYVVDG 314 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADG 318 ++ GK+ V + ++ + + + Y A+ Sbjct: 315 KFVSTCAQQPIKMGKLGVANMAKIFAGKDAESYIDTGCELITSENAKQTLEETKKYTAEI 374 Query: 319 NG 320 + Sbjct: 375 SP 376 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 115/305 (37%), Gaps = 10/305 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAA----ERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 ++ KKI + + + ++ + +I + + FF + +GA++ ++LG Sbjct: 1 MNINKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGY 60 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 D+ + + + + + G A++++ D + ++ A + + V+T D Sbjct: 61 DLVVLDSQN-DPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQ 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA--KVAFFYSSPTVTDQNQWVKEAKA 176 + +I + G M + + +K V P + + Sbjct: 120 ANGGKITSHI-ASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHN 178 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 + K + ++ Q D K LQ E I++A ++ + A + A +A + Sbjct: 179 IMDKND-KFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVKAIKASG 237 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 + + ++GF + + ++ + G + V +A+ + K S+K D+ Sbjct: 238 INAL-VIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIKNKIAADL 296 Query: 297 KGVGQ 301 K + Sbjct: 297 KVYTK 301 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 122/295 (41%), Gaps = 16/295 (5%) Query: 9 IALLSALGIAAISMNVQAAE-----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 ++ +G AI++N + I I + G + + N ++A K+L + V Sbjct: 12 ALVMGIMGQCAIAVNAASKTDDDTLNITLINQGSGQPYIAAYKNCFEKAEKDLNIKVNLV 71 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW-------D 116 + Q I N ++ G + I++S V P +C + A+ G+ V D Sbjct: 72 DGGW-DANQQANAIQNAISSGADGIVISPVDPSAVCTYVDEALDAGIEVCALTTQIGTGD 130 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 ++ + + ++G +D+AA +++ K+A +P ++D K Sbjct: 131 AEDPVYPETVGLVGHIETEVGRTAMDIAAEALDR-SGKIAIIEGTPGMSDTEGRKKG-ID 188 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 + KE+P E+V+ G K+ + I+++ +++ +I N AA+A E+ Sbjct: 189 EENKEYPDIEVVSRVCGEWVVDKAYTAMQNIIQSNPEVELVICHSDNMAVGAAKALEDAD 248 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 DKV IVG +++G + ++ + ++ +++ + K Sbjct: 249 MTDKVKIVGIGGSKDALDLIKKGEIYGTIMYVPETEAYTALEATAKVVRGEAEKE 303 >UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Thermoanaerobacterales RepID=B0K232_THEPX Length = 324 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 126/317 (39%), Gaps = 20/317 (6%) Query: 6 FKKIALLSALGIAAISMNVQAAERIA-------------FIPKLVGVGFFTSGGNGAQQA 52 K+ L+ + IAA+S+ + +++ + + F+ GA A Sbjct: 1 MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDA 60 Query: 53 GKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRV 112 K V + ++ P ++ ++Q ++ + + II + ++ A + G+ V Sbjct: 61 AKRYNVAIEFNAPKFNNIQEELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPV 120 Query: 113 LTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS---SPTVTDQNQ 169 +T ++D K R +I GT + G Q K KA +A S +QN Sbjct: 121 ITIENDAKDSKRQAFI--GTNSFQLGEEAGKLMIQATKGKANIAIIVSNDYQLDTVNQNL 178 Query: 170 WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAA 229 + I K++P ++V + + + I+ + +++AI D+ A Sbjct: 179 KINGFLDAI-KDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTA 237 Query: 230 QA-AENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 Q + K +AIVG+ + Y+++G + + D + G SV + +K ++ Sbjct: 238 QVIVDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNV 297 Query: 289 KTGDKLDIKGVGQVEVS 305 T + + + + V Sbjct: 298 STFVDIGVNVITKDNVK 314 >UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9L7_LARHH Length = 330 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 104/291 (35%), Gaps = 9/291 (3%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSV-SGQV 74 + + + RI + K +F+ NGA +A E G+D++ E Q+ Sbjct: 34 AFSQSAGQNTSPARIVLVMKSPTNPYFSELANGASRAQLETGIDLSIKVAHEDDALEQQI 93 Query: 75 QLINNFVNQG-YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT- 132 +LI+ + + +AI+++ L P L RA + G+ V+ + +P + Y Sbjct: 94 RLIDEVIAKHQADAIVIAPTDSIRLVPVLARARKAGIHVINIGNRLEPRIVALYGMPVVP 153 Query: 133 ----PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 V + +KVA + Q + A ++ G +V Sbjct: 154 LISIDNASAAYQVAGKLAEGLPRGSKVAIIEGLLGTNNTRQRTEGALQAFSEA--GLRVV 211 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTP 248 Q ++ Q +L+ Y DL AI + AA+ V + GF Sbjct: 212 AKQSARWKGDEAYQVTAQLLRDYPDLRAIFCSNDMMALGAARYLREKGITGVRLAGFDGI 271 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 R + + + +QG ++V +A + + +D + + Sbjct: 272 TEARSALHQRQLVATIDQHASEQGYLAVRLAVDAIAGRPLAEETLVDTELL 322 >UniRef50_A1WIH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WIH3_VEREI Length = 347 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 125/336 (37%), Gaps = 24/336 (7%) Query: 4 HRFKKIALLSALGIAAISMNVQAAER---IAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + ALL+A + AA++ + + + FF +A K+ GV Sbjct: 5 RKLSLSALLAATLSMLAAPAPAAADKTPVLGIVAIDLQNSFFVRMRQAGDEAAKDYGVKT 64 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + G +E S+ QV I NFVNQG + I+V + + A+++A RG+ V+ + Sbjct: 65 IWQG-SEGSLEKQVSNIENFVNQGVDIILVDPLDRAAIASAVQKAKARGIPVIAMGNKVD 123 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + P +V A + K +VA + + + + K Sbjct: 124 GHWNYNTLYPDYPNM---SMVARALGKQLDGKGEVALLIGGKGNHVSDTREQAFRDVMKK 180 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 E PG +V + D+++S + L Y L + A+++ AA+A + K+ Sbjct: 181 EFPGIRLVGVEPTNWDSSRSANAMQTWLSTYPQLRGV-GCFADSICIAAKAIADASGRKL 239 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM------------ 288 + M P V G+ L + G ++ A +++ Sbjct: 240 VFASYEGDPEMFPSVADGSTVIDVLNGAYRVGYWNIAAAARIVRGAKYGVDLFMPTYFVM 299 Query: 289 --KTGDKLDIKGVGQVEVSPN--SVQGYDYEADGNG 320 KT L KG+ ++P V+ +Y A Sbjct: 300 SDKTAGALKAKGLELPFITPERAKVEALNYRAQMGP 335 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 114/288 (39%), Gaps = 3/288 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A +AFI + G F+ + G + +LGV V G + + Q +++ Sbjct: 55 AAPTKAGKDYNVAFIQGVAGDEFYITMQCGIEAEAAKLGVTVNTQGGQKFDPTLQTPILD 114 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 + V +AI+++ + L+ A G++V+ D+ T+ + + + GG Sbjct: 115 SVVASKPDAILIAPTDVTAMQRPLENAAAAGIKVVLVDTTTE-DPSFAVSQVSSDNEGGG 173 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 A + N + KV + P ++ + VK + + K+ ++ + Q+ +ND Sbjct: 174 AAAFKAIKDKNPNGGKVLVISTDPGISTVDARVKGFEDAVGKD-STFDYLGVQYSHNDPA 232 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPNVMRPYVER 257 + Q L+ D+ I A + + ++ + K+D++ IVGF ++ Sbjct: 233 TAAQLVTAALQKDPDIVGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPNQVKALKD 292 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 GTV+ G + A A L G++ + + V Sbjct: 293 GTVQALVAQQPATIGTDGLDQAIASLDGGTITPKIQTGFTIITADNVD 340 >UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VC4_BRAJA Length = 314 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 113/296 (38%), Gaps = 14/296 (4%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYD 63 +K+ L + A R +PK + FF +G + KELG ++ Y Sbjct: 4 TMRKLLLAGIAVAMMATPAFAANYRFVIVPKAMNNPFFDFARDGCLKRAKELGNIECVYK 63 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 GP E + Q Q+I +FV Q + + +S + +++ A G+ V+T+D+D Sbjct: 64 GPVEHEPATQAQIIQDFVTQKVDGLAISVADVAAMTKSIEAATAAGIPVITFDADAPGSK 123 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 R YI GT + G+ + ++ D K A P + + V + + Sbjct: 124 RIAYI--GTNNKEFGVALGKQLVKMRPDGGKYAMVSGGPGAKNLAERVDGVREALKGS-- 179 Query: 184 GWEIVT--TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA-------AAQAAEN 234 W V F +D ++Q + A DL AI+ + A A++ ++ Sbjct: 180 KWTEVAGSPTFCNDDPALAVQQMTDMRTATPDLAAIVPIGGWPMFAPEGFKAFASRNKKD 239 Query: 235 LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 + + K +V T + + G + G+ ++ A+ K + Sbjct: 240 IDSGKFTLVVADTLKMQLELLRDGYANALVGQRPFEMGEKAMDTLLAIKKGEKVPE 295 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 111/301 (36%), Gaps = 13/301 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAER-IAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + + L+A G S + E+ I I K++G +++ GA++AGK+LG V Sbjct: 7 MMLALVMVFSLTACGSTNKSKDSSEGEKTIYVIVKVLGNQYWSVVQAGAEKAGKDLGCKV 66 Query: 61 TYDG-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 G E + GQV+ I + ++ +AI+V+ + L + + G ++ DS Sbjct: 67 VIVGTAAESDIEGQVRYIQDAISAKADAIVVAPLDRTALKNPISEQFKSGTPIVLIDSSV 126 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDK------AKVAFFYSSPTVTDQNQWVKE 173 + E S + + G M ++ +A S N +K Sbjct: 127 EGEDYSTALMT-DNVEAGRMAAKEMIARLKAKGVAEDKEGTIAIQAGSTGSMAINDRLKG 185 Query: 174 AKAKIAKEHPG-WEIV--TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ 230 + P W+++ + D +K++ + L Y++L + P+ + Sbjct: 186 FNEYWGENAPASWKVLNDDIKINDGDISKAVAFCQDFLTTYTNLIGVFGPNNGSTVGFVT 245 Query: 231 AAENLKNDKVAIVGFSTPNVMRPYVERGTVK-EFGLWDVVQQGKISVYVADALLKKGSMK 289 K + ++GF N + + G + G V A L G ++ Sbjct: 246 GLTEAKRTDLTMIGFDFSNEIEQMIRGGEYDVASMVQRQYMMGYDGVKTALELANGGKVE 305 Query: 290 T 290 Sbjct: 306 N 306 >UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU3_9FIRM Length = 325 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 122/293 (41%), Gaps = 8/293 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGV--GFFTSGGNGAQQAGKELGV 58 +T+ A++ GI + +IPK+ F+TS +G + A +E Sbjct: 9 ITVAILMAAAVVIFAGILKPEATQTKKCSLIYIPKIRDNTNDFWTSVISGCKMAAEEYES 68 Query: 59 DVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 D+ P E ++ Q +L+ + Q +AI+ S S D LK A ++G+R+ DS Sbjct: 69 DLEILAPDKEENIEEQNKLLKKAIEQKPDAILFSPSSMDSSDELLKEAKEKGIRITYIDS 128 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 TK + + + T G ++ AR++ +K+A V+ + + + Sbjct: 129 YTKEKLQDLTV--ATDNVNAGRMLGEYARKLIDKDSKIAIVSHVKGVSTAVEREQGFREG 186 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 + ++ IV + + KS + A+ +++ Y DL+ I + + +A + Sbjct: 187 LG-DYAD-NIVDIVYCNSLYEKSYELAQELMRKYPDLELIAGMNEYSAVGVGRAVSDAGA 244 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 DK+A+VG +E G K + + G I V +L +++ Sbjct: 245 KDKIAVVGVDCSQEAINLMEMGVYKGIIVQKAFRMGYIGVEETIHMLNGDAVE 297 >UniRef50_A9GIG1 ABC-type sugar transport system, periplasmic component n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIG1_SORC5 Length = 339 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 8/259 (3%) Query: 27 AERIAFIPKLVGVG--FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 +I + + F+ G ++ +E V V P+ + Q Q++ N +QG Sbjct: 45 KPKIVKLAFVTNNASEFWKIAQAGVRKYEQESKVQVDVKMPSNGTTEEQNQILENLSSQG 104 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 Y+AI VSA++P P L + ++ +++T+DSD R YI GT G + Sbjct: 105 YDAIAVSAIAPADQVPVLNKVAEKS-KLITFDSDAPASSRLLYI--GTNNHEAGKALGAH 161 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 ++ D K+A F + + + Q ++ + IA + EIV + D K+ Sbjct: 162 IVKLLPDGGKMAVFVGTLSADNAKQRLQGIQDAIAGK--NIEIVDKREDNTDRAKARSNV 219 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNVMRPYVERGTVKEF 263 E I+ A+ DL + + PA A A E K KV F +E GT+ Sbjct: 220 EDIINAHPDLKLVAGLWSYNGPAIAAAIEALGKKGKVLAAVFDEEEETLTAIENGTISAT 279 Query: 264 GLWDVVQQGKISVYVADAL 282 + Q G ++ A L Sbjct: 280 VVQKPFQFGYLASKWAHEL 298 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 11/301 (3%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + ++A + + +F A+Q ++LG + T + + + + Sbjct: 29 QQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQN-DTAKESAHFDAIIA 87 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 GY+AII + DG +KRA + G+ V D + + GG+L+ Sbjct: 88 AGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINARGLAV-AQIYSDNYYGGVLMG 146 Query: 143 MAARQVNKDK------AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + K+K A + + + ++P +++V Q D Sbjct: 147 EYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVV-DQYPEFKMVAQQSAEFD 205 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE 256 + + E IL+A+ ++ AI + A +A E + I GF + ++ Sbjct: 206 RDTAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRTDIYIFGFDGAEDVINAIK 265 Query: 257 RG-TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD-KLDIKGVGQVEVSPNSVQGYDY 314 G + + +++V AD L+ + ++ V + + + G Sbjct: 266 EGKQIVATIMQFPKLMARLAVEWADQYLRGERSFPEIVPVTVELVTRENIDKYTAYGRKE 325 Query: 315 E 315 E Sbjct: 326 E 326 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 114/322 (35%), Gaps = 37/322 (11%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE-----PSVSGQVQLINNFVNQ 83 +IA++ K F+ G Q +ELG+ E V Q+ I ++ Sbjct: 79 QIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQISTILELIDN 138 Query: 84 G-YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 + ++++ L P +++A Q+G++V+ D+ + ++ + G +L + Sbjct: 139 NDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTDQILTFVT-FDNFEGGQILGE 197 Query: 143 MAARQVNK-----DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG--WEIVTTQFGYN 195 +++ + +K + S + + + + + + EI+ + Sbjct: 198 WVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNYSLEILDLKSADW 257 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 + K+ + L+ + +D I+A D A++A + + I GF + Sbjct: 258 ETKKAKMITQAWLEKFPTIDVIMAADDQMAVGASEAVQEANKSGIIITGFDGTPYGLNAI 317 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + G + Q + + L+ K L + + E + NS Sbjct: 318 KTGQIDATINQLPRTQ----ISLITQLMINSLEKEQTTLPLCQLIGQEQTENS------- 366 Query: 316 ADGNGIVLLPERVIFNKENIGK 337 ++ ++NI + Sbjct: 367 ------------LLITQDNINE 376 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 5/262 (1%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLINNFVNQ 83 + + ++ K + ++ S + AQQ LGVD+T P E + QV +I + + Sbjct: 46 KEGISVYWVGKTLNNPWWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSMIEAAIEK 105 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 +AI+VSA S DG+ PA+K+A + G++++ +D+ G Sbjct: 106 KADAIVVSAASSDGVIPAIKKAREAGIKIVNFDTRISDTSVIDAFVGGDDVAGAYKAGKY 165 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 Q+ + +VA + A E+PG ++V Q + K+ Sbjct: 166 ICEQLGGE-GEVAIITGLMEQSTGVDRHAGFMQACA-EYPGIKVVAEQGAEWSSDKAADV 223 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQ--AAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 IL A ++ AI A + A K D + +VG+ G + Sbjct: 224 TTNILTANPNVKAIFACNDQMAVGMVNAAKAAGKKADDLILVGYDGILDAVNMTMDGDLD 283 Query: 262 EFGLWDVVQQGKISVYVADALL 283 F + +G + V +A AL+ Sbjct: 284 AFVSLPNLDEGAMGVKLATALV 305 >UniRef50_C6BZX1 Putative D-ribose-binding periplasmic protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZX1_DESAD Length = 312 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 95/290 (32%), Gaps = 3/290 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQ 75 + A + I IPK F+ GA A ++ + + + GP E S Q Sbjct: 1 MLCFPCASYAQKTIVTIPKATIFNFWRIVCMGAHAAVEDSDITLIWRGPRVENKPSAQRH 60 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ +++Q +AI+++ + L P +++A + G++++ DS + +I T Sbjct: 61 LLEYYIDQKVDAIVLAPMDRKTLNPYIEKASKAGIKIVIIDSPVTTDSIDGFI--ATDNY 118 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + K V SP K K+ PG I+T Sbjct: 119 KAGAMGAELMASKLKGTGPVLVVGHSPDNGSCALREKGFIDKMQALSPGRTIITIHMLDG 178 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 ++ + + IL + + + ++ + + F + V Sbjct: 179 SERETRLSTKEILTNTPSIAGVFTTNEATSDGVLHVMQDRNETHIPFIAFDYNQKLLEGV 238 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 ++ G V A LL + + + + + Sbjct: 239 RNKQIEALITQRPYALGFFGVRSAIELLNGKKISKHMESPVTIITNDNID 288 >UniRef50_A1STY3 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY3_PSYIN Length = 334 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 104/285 (36%), Gaps = 7/285 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQ 83 Q IA + K + FF GA++A K+LG+++ E S+ Q+ ++ + + Sbjct: 51 QDKHTIALVMKTLTNPFFKEMERGARRAEKDLGINLLVKTAAQETSIQQQIGIVADLIEL 110 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTKPECRSYYINQ---GTPAQLGG 138 +A++++ L P LK A +G+ V+ D+ D + + +N +L Sbjct: 111 KVDALVIAPGDSVELIPILKHAQDKGIIVINIDNLLDQEYSKKVGLLNVPFISVDNELAA 170 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + +VA + A + E +V T+ Sbjct: 171 YKSTKVLTEKLTQPTEVAIIEGIRGALNAELRKNGAI-RAFSESKFATLVATESANWKID 229 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 ++ + A + ++ AI + + ++ D V +V F V+ G Sbjct: 230 EAFELAAKLYNKNPNIGAIFCANDMMALGVIEYLQSTGKDNVQVVAFDAIPQALNAVQSG 289 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 + D +QG + A+ +L ++ K + ++E Sbjct: 290 VLLATVDQDAAEQGYQGILSANNILSGKKTPLKITIEAKIITKLE 334 >UniRef50_B5K960 ABC transporter, periplasmic sugar binding protein n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K960_9RHOB Length = 254 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 104/251 (41%), Gaps = 5/251 (1%) Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 +++ +D P + V+ Q + I + + + I V+ + + A++ GV V+ ++S Sbjct: 8 IEMIWDQPPQADVADQNRRIETNIGRQPDGIAVACLDRVTNVQLMNEAVKAGVHVINFNS 67 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 ++ + Q G L + A ++ + +A S T +D + ++ K Sbjct: 68 FCDDAFP--FVGPKSSVQDGYDLGEYLAEELGGE-GTIAILSGSLTASDHVERIEGFKDA 124 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-K 236 ++ +HP EIV Q + +++ E +L+A+ D+D I +A+ AA+A +N K Sbjct: 125 LS-QHPEMEIVFEQPDNDILDQAITLTENMLQAHPDIDGIFGSNASNPIGAARAVQNAGK 183 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 ++ IVG +V G + G ++ A+ + + Sbjct: 184 AGEIVIVGMDDLPEAVDFVCSGVISALKAQRQWDMGYWTILYLVAMNENHTYPMAHDTGT 243 Query: 297 KGVGQVEVSPN 307 + + Q + Sbjct: 244 RFLTQEDCVDK 254 >UniRef50_B5I626 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I626_9ACTO Length = 380 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 10/285 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGV---DVTYDGP 65 +A L A +A++ + IA + + ++ +G G + +LG+ TY P Sbjct: 59 LAKLDAALKSALAGKDLSKVDIAMVVNVAA-DYWKAGQVGFLKGCSDLGIAKSKCTYFAP 117 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 ++ Q + +QG +SA+ P + +Q+G+ VL DS + Sbjct: 118 PNGKLTEQNSELETLRSQGVTGYSISAIDPTSAAGTIHTDVQKGIGVLAIDSPLPG-TDA 176 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 + GTP G A +QV K KVA S T ++ Q + +A + Sbjct: 177 ASLYLGTPNYTAGFQAGTAMKQVLGGKGKVAILVGSLTASNATQRIAGFEAALKGT--KI 234 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVG 244 + A+ + AE IL D++ + + PA AQA + K V IV Sbjct: 235 TVAQKVNDNLQASTATSDAETILANNPDVNGLYGVYSYDGPALAQAVTSAGKTASVHIVS 294 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVY--VADALLKKGS 287 + +++ G + + QQG Y A+ +L K Sbjct: 295 DDSDAQTLKFIKSGVISGTVVQMPYQQGYTGAYILAAEKVLGKDR 339 >UniRef50_C5EI71 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI71_9FIRM Length = 357 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 100/266 (37%), Gaps = 7/266 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLINNFV 81 +A + I IPK F+ GA+ A E G + Y G + Q ++ + + Sbjct: 62 ASEATKVIGVIPKSTLFDFYKMVRQGAEDAAAEHGYTINYQGTNSSTDTATQQNIVEDMM 121 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLV 141 G +A+++S++ + + + V+T+D + P ++ + Sbjct: 122 MSGIDALVISSIDAKAINDTMASL---DIPVITFDDEMNPSVCLTTVS--VNHEAAAAAG 176 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 + D KVA + Q + + ++ K+H G+E+V D K+ Sbjct: 177 AAYIAEKLPDGGKVAVVSAEAGTDVIQQRDRGFENEL-KKHDGFELVGVYHTEGDREKAA 235 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 T + +L + DL A+ + A ++ ++ + VG+ + + + G++ Sbjct: 236 NTMQDLLSEHPDLVAVFCCNEGASAGVSKILKDEGRTDILAVGYDSSEELINNIYDGSLD 295 Query: 262 EFGLWDVVQQGKISVYVADALLKKGS 287 + G SV A + S Sbjct: 296 ALISQNPYGLGYNSVTAAIEAIDGKS 321 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 12/279 (4%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 ++ +I F + FF G ++ KE G D+ QV N Sbjct: 60 VANAAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDL-VQTNANGDAQQQVNDAIN 118 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI---NQGTPAQL 136 ++QG A++++ + + PA+++A + V T D + + ++ N Sbjct: 119 LLSQGVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSDGGKVTSFVASDNVALGQTA 178 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + D ++ K V T K +IAK +P ++V Q G D Sbjct: 179 AKWIADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAK-YPDIKVVARQEGAFD 237 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-------VAIVGFSTPN 249 KSL IL+ Y +DA+ + + A +A +N K + ++G Sbjct: 238 QEKSLNAMTNILQKYPQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILVIGADGTA 297 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 + G + +Q S+ K + Sbjct: 298 QALSAIRAGKQDATISQNPIQMAAKSLQFVADYTAKKDV 336 >UniRef50_A7B0G4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0G4_RUMGN Length = 395 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 139/342 (40%), Gaps = 40/342 (11%) Query: 31 AFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIV 90 F+ K G F G ++ G Y P E +V+ QVQ+++ + Q +I + Sbjct: 56 VFMFKSTGNSFGDLMYEGFEEYLSGKGQKTVYKSPAETTVAAQVQMLDELITQKVASITI 115 Query: 91 SAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA----- 145 S G K+A + G+ +++ DS+ P+ R ++NQ A +G LV A Sbjct: 116 STNGDAGYDEVFKKAKEAGIPIVSVDSEASPDYRVCHVNQAETADIGSYLVQAAVLITLG 175 Query: 146 -----------------RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI- 187 + D+ K+ +S QN W+ + +++K+ ++ Sbjct: 176 VDYPGDGKMEETVQSELKSYKGDEIKLGVLSASIDTPVQNSWIAAMEDELSKDFYAGKVS 235 Query: 188 --VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGF 245 + ++G +D T+S A+ + S +D II+P + AA QA ++ + ++ + G Sbjct: 236 KELDKKYGNDDLTESTTQAQAFIAENS-VDCIISPTTVGIAAAGQALKSSNS-EIKLTGL 293 Query: 246 STPNVMRPYVERG--------TVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDI 296 P+ M+ ++ + LWDV+ G +S A ++ G ++ Sbjct: 294 GIPSEMQSFMPKSADEDAFDYVCPYMMLWDVIHLGAVSGAATYAAVEGTFDGTEGSSFEM 353 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 E + Y + VL + +F+K N+ ++ Sbjct: 354 DAFRDYEAT----TYEAYRSGDGTAVLAGDPFVFDKSNMAEW 391 >UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=Pseudonocardineae RepID=A4FMX8_SACEN Length = 323 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 116/323 (35%), Gaps = 9/323 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER-------IAFIPKLVGVGFFTSGGNGAQQAG 53 M H ++L G + + + +A + + G F+ S A+Q Sbjct: 1 MRRHILAVASVLLLAGCGSGQIGDTGGGQTDPNNRNLALLTGMRGEPFYVSMECAAKQQA 60 Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 G ++ P + + Q Q++ + A+I++ L L++A GV+V+ Sbjct: 61 AAAGYNINAQAPEKFEQAEQSQMLTGIIGTRPGAVIIAPTDDKALAAPLQQAKNNGVQVV 120 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKE 173 D+ + + G + A+ V + + ++ K Sbjct: 121 EVDTALEDRSIAVASLSSDNYAGGKLAAQTLAQLTGGKPGAVLALNTKAGTSTTDERAKG 180 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 + +IAK HP ++ TQ+ N+ + Q L A DL + A + N A A Sbjct: 181 FEEEIAK-HPNLRLLPTQYTENEPATAAQIVSATLAANPDLVGVFATNLNTGEGAGTALA 239 Query: 234 NLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 N +V +VGF + G V+ D G+ V A A +K ++ Sbjct: 240 NAGRSGQVQLVGFDASPKQVEDLRNGRVQALIAQDPAAIGREGVDRAIAAIKGQPVERET 299 Query: 293 KLDIKGVGQVEVSPNSVQGYDYE 315 + ++ + + + S Y E Sbjct: 300 RTNMIAITKDNMQAQSQYFYKSE 322 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 7/294 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + Q + +I F + +F + + ++ ++ P + Q I ++ Sbjct: 56 DEQESWKIGFSGIDMENPYFLTLESAIKEEVDGKNCELIVKDP-KTDPDMQASQIQEMID 114 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-ECRSYYINQGTPAQLGGMLV 141 +G NAII+S V + + P+L+ + V+++ D+ K + YI G+ G+L Sbjct: 115 EGINAIILSPVDWEKITPSLEALKEADVKIVNVDTQVKEMDYVDAYI--GSDNYNAGVLC 172 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 + D KVA PT N+ + + +AK G+EIV + + KSL Sbjct: 173 GEDLIKRCPDGGKVAILE-CPTQNSVNERITGFEETLAKAENGFEIVAREDTSGEFQKSL 231 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT-- 259 + A+ IL SD+ AI+ + A A + ++ I G ++ +++ Sbjct: 232 EAAQKILSENSDIVAIMCGNDQMAVGAKTAMNVAEQGQILIYGVDGSPDIKKELKKTENQ 291 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + + GK + +L + K ++ + Q V V G+ Sbjct: 292 IAGTVAQSPISMGKDAANTVLNILNGKDYEKEIKENVFMINQENVDMYGVDGWQ 345 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 117/292 (40%), Gaps = 8/292 (2%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ 83 + + + + FF + ++ G + P VS Q+ IN+ + Q Sbjct: 37 TKKKHKFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITMDPA-MDVSKQIDQINDMITQ 95 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-ECRSYYINQGTPAQLGGMLVD 142 G A+ ++ V +G+ P L+ + + ++ +D++ K + Y+ G+ + G + Sbjct: 96 GVEAVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNYVTAYV--GSDNKNAGKVCG 153 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 + + K+A PT+ N + K+ I + + IV Q G D S++ Sbjct: 154 DDLVKRYPNGGKIAILN-CPTMNSINDRIAGFKSAIEGK--NFTIVAEQDGKGDLQTSMK 210 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER-GTVK 261 A+ IL+++SD+ AI+ + A A ++ K K+ I G + + G Sbjct: 211 LADDILQSHSDIVAIMGGNDPTALGALAACKSAKQSKILIYGVDGSPDAKKEIASGGQFV 270 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 G Q G S + +L K +++ + + + VS G+ Sbjct: 271 GTGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQTFLINKDNVSKYGTTGWQ 322 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 125/308 (40%), Gaps = 18/308 (5%) Query: 16 GIAAISMNVQAAERIAF-IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQV 74 + +A ++I IP VG +F + G +A E V++TY S Q+ Sbjct: 28 AAGNTAETKEAKKKIGVLIPGPVG--YFVAVREGIDKAAAENNVEITYSDAGW-DASKQL 84 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP------ECRSYYI 128 + + +++ + I ++AV + A++ A + + +L + + E Y+ Sbjct: 85 SQVEDLISKKVDLIAIAAVDSNAAKTAVRMANEANIPILAFTNAIGDKENGEYEGLITYV 144 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 Q + G + ++A + + KV P + Q K + +E+V Sbjct: 145 GQ-NEVETGKLTGELAKSLLGEKGGKVVLIEGRPGTSPQINRRKGVMEALDTN-KNFEVV 202 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFST 247 TQ + ++L+ E +++ +D IIA D N+ A A + DK+ ++G Sbjct: 203 YTQTSNWEKEQALKIVEDLIQKNQTIDVIIAQDDNSAIGAGMALKEANLKDKILVIGLGG 262 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 V+ G + V++G ++ A L ++ + + QVEV+ + Sbjct: 263 STEGLNAVKSGLIDGTTYMSAVEEGYTAITAAVKYLNGEKVEP-----VTQMKQVEVNKS 317 Query: 308 SVQGYDYE 315 +V+ + E Sbjct: 318 NVESFKGE 325 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 114/288 (39%), Gaps = 7/288 (2%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGY 85 E+I + F+ + ++A ++LG+++ ++ E GQ+ +N V G+ Sbjct: 89 GEKIGVLISSTSNEFWGTMKTRYEEAAEDLGIEIRVFEADAEDDTQGQLDALNTMVTMGF 148 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLT----WDSDTKPECRSYYINQGTPA-QLGGML 140 +AII+S + L P + A + + V+ D++ + + + T + G Sbjct: 149 DAIILSPIDGTNLIPGIVAANEAEIPVINLGPGVDAEALADAGGHLDGKITVNFEEQGST 208 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 V +D KVA AK + + G E+V Q D K+ Sbjct: 209 VANDMISRMEDGGKVAILAGLEGAGQSVGRTNGAK-TVFENTEGVELVAAQACDWDTEKA 267 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + + IL A+ DL I A + N AA QA + + N V + G + +E GT+ Sbjct: 268 YEATKDILTAHPDLKGIFACNDNMALAAVQALQEMGNKDVMVYGVDYTTDAKAAIEDGTM 327 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + K + +A +++ + K L + V Q V+ Sbjct: 328 MGSMTYSSAIYTKAAEEMAMLIVQGKTFKDPVYLPLTLVTQDNVADFE 375 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 10/271 (3%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQ---QAGKELGVDVTYD---GPTEPSVSGQVQLI 77 V+ ++ + K ++ + G + Q KE G ++T D E GQ+ ++ Sbjct: 67 VEGEIKLGSVAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQGQLSIV 126 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 + +N+ Y A+++S +S L P +++A + + V+ + ++ I G A + Sbjct: 127 EDMINKKYTALLLSPISDGNLVPGVEKAKKNNIPVINVN---DGIIKNADIFVGPKAIMN 183 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G L + + +VA P Q + + G +IV Q D Sbjct: 184 GELAAEWISKKIGGEGEVAIVIGMPKAFAARQRTLGFENWMKSNAAGVKIVEKQNADWDR 243 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 K+ AE +K Y +L AI + +A K D + +VG + + Sbjct: 244 AKAKDLAEIWIKKYPNLKAIFCNNDVMALGVQEAVNASKRD-ILVVGVDGIKEAYESIRK 302 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 G + + +G+I+V +A L + Sbjct: 303 GEMDATVDSFPLYKGQIAVEMALRSLGGQQL 333 >UniRef50_B9Z651 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z651_9NEIS Length = 309 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 8/288 (2%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 +++ L LG A S+ QA E I + G F+ + G GA QAGKELG+D+ + GP Sbjct: 2 LRRVILAVLLGSAVPSVPAQARECIEVVSAGGGYAFWQAVGEGANQAGKELGIDIYFRGP 61 Query: 66 T-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 E Q + N + A++++ +P+ ++R +G+ + D DT Sbjct: 62 AKEEDRDAQETIANMMWDLHCQALVMAPNAPER-ARLVERLKAQGIPTVYIDRDTGGADV 120 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + + T G L + + +VA V + A G Sbjct: 121 AAVV--ATNNLRAGQLAGEEMARALGKRKRVAVLRERADVVSTEDRARGFIE--AATRAG 176 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYS-DLDAIIAPDANALPAAA-QAAENLKNDKVAI 242 ++V + + S AE +L A +D + P+ + A Q + KV Sbjct: 177 LKVVRSAYIGTSVGDSRVEAEKVLAALRGKIDGVFTPNESTTLGAVIQLKKMGLAGKVLH 236 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 +GF + + V G + + + G V++A + +++ Sbjct: 237 IGFDSNQYLASAVRLGDLYGLVVQRPREMGYQGVFLAYRKAQGQTLEV 284 >UniRef50_Q92L85 Putative periplasmic binding ABC transporter n=1 Tax=Sinorhizobium meliloti RepID=Q92L85_RHIME Length = 337 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 127/320 (39%), Gaps = 28/320 (8%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDV 60 TL +A L+A G+ A N E A + K++ F G + A K+LG V Sbjct: 6 TLTAALSVACLAA-GLTAPQANAADRE-FALVFKVLNNAFSPPIQQGCEAAAKKLGDVTC 63 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 TY GPTE + QVQL + V +G + VSA +P + +K A +G+ V+T+D+D Sbjct: 64 TYLGPTEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDVL 123 Query: 121 PEC---RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 PE RS YI GT G+ + + KD V +P + V+ + Sbjct: 124 PEDAGLRSTYI--GTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIRDT 181 Query: 178 IA--KEHPGWEIVTTQFG-----------YNDATKSLQTAEGILKAYSDLDAIIAPDAN- 223 +A + G E +T Q G +D T + Q ++ +L A +A Sbjct: 182 LAGVTKDKGAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGGWA 241 Query: 224 --ALPAAAQAAENLK----NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVY 277 A A QA E LK + + +V P + G G ++ Sbjct: 242 QYAPQAYKQAMEPLKARLDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQRPYDMGYETIM 301 Query: 278 VADALLKKGSMKTGDKLDIK 297 D L K ++ K + Sbjct: 302 ALDKLTKGEKVEPFIKTGTE 321 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 100/306 (32%), Gaps = 9/306 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQV 74 A + + I F+ + + + NGA+ + GV + G S Q+ Sbjct: 60 SSAEAASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQL 119 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI----NQ 130 +I N + + I++ S DGL AL + + G+ ++ D+ E + Sbjct: 120 GIIENMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDIPFY 179 Query: 131 GTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 GT G L + + K A T+ +V Sbjct: 180 GTNNYEGAKLAGEYVAKNFEKGTKTAILKGIEGQTNAADRYNGFIEGAGDT---VTVVAE 236 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPN 249 Q + + A+ I+ A D++ + N A +A + +++ I+GF + Sbjct: 237 QTANWEVDQGYTAAQNIISANPDVELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAVS 296 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 VE G + GK+ V + G ++ + + + V Sbjct: 297 EALNLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGGEAESYIDTGTEVITKDNVGEFKD 356 Query: 310 QGYDYE 315 +E Sbjct: 357 YLKTFE 362 >UniRef50_A8FI27 Sugar ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacillus pumilus RepID=A8FI27_BACP2 Length = 334 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 4/275 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 A+ + +P+ + ++ GA A V + Y GP + + ++ Sbjct: 36 SASEKASSAYQYHFVLVPEELDNEYWQLVQKGAADAAAAHRVYLEYLGPKQADIDDHLKT 95 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 I+ + + I+ + P ++A ++G+ V+T D+D + R Y+ GT Sbjct: 96 IDMAIAGHVDGIMTQGLDAKKYKPLFQKAREKGIDVVTVDTDAEGSKRQVYV--GTDNYY 153 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 G + A K + V Q Q VK + +A E I + Sbjct: 154 SGFIAGQALIADTKGEQYVGIVTGRLDAVHQKQRVKGFRDAVAAE-KRIHIAGIEESAIT 212 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNVMRPYV 255 + + A +L +++L A A QA + ++ F T + Sbjct: 213 KSGASGAAYKLLNDHANLTAFYGTSALDGVGIIQATSQYQSTTDIYVLAFDTLPDTIQAL 272 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 + G + + + G +V L K + Sbjct: 273 DDGEIDAVVVQHPYEMGYQAVESLVRLQKGEKEEP 307 >UniRef50_A3K5X2 Putative periplasmic binding abc transporter protein n=1 Tax=Sagittula stellata E-37 RepID=A3K5X2_9RHOB Length = 330 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 115/290 (39%), Gaps = 27/290 (9%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQ 83 A +PK + FF +G +A +E+ GV Y GP E + Q+Q++ + + + Sbjct: 23 HGGYTFALVPKAMNNPFFDLARDGCYKAQEEIEGVTCEYIGPGEHTELEQIQIVQDLITK 82 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC---RSYYINQGTPAQLGGML 140 G + I VS + + LK A G+ V+TWD+D + R+ ++ GT G+ Sbjct: 83 GVDGIAVSPSNAPAMAKTLKEAEAAGIPVITWDADLLEDDKGLRAAFV--GTNNYDIGVE 140 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG---WEIVTTQFG---- 193 + + + D + + N+ +K A+ +A E G +++ Q G Sbjct: 141 LAKLVQARHPDGGTICLQTGGAAAANHNERLKGARDTLAGEDMGEAPGDMLDGQGGWTEI 200 Query: 194 -------YNDATKSLQTAEGILKAYSDLDAIIAPDANAL-------PAAAQAAENLKNDK 239 +D ++Q IL A DL A ++ A AA + + + Sbjct: 201 SGCPLITNDDGNVAVQGMTDILAANPDLTAFLSTGAFTQWFDNAYRGAAEPYKDKMASGD 260 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 + IV T + + G + G +++ + L GS++ Sbjct: 261 LTIVVADTLPMQIAQTKDGLGNGLVGQRPFEMGYLAMQMLKDLKDGGSLQ 310 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 115/280 (41%), Gaps = 7/280 (2%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I + F + + + KE+GV++ E S QV+ + +F+ QG +AII Sbjct: 34 IGATMLSMQNEFIVNVSDAMEAKAKEMGVELITVD-AERSALKQVEQVESFIGQGVDAII 92 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVN 149 ++ + PA+K AM + ++ +S+T + ++ + + + A ++ Sbjct: 93 MNPAEVEASSPAIKLAMDAKIPIINVNSETSAKPTAFV--GSDDTESARIAMKYIAEKL- 149 Query: 150 KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK 209 K + + Q + AK I K +PG +++ Q G D K + E ++ Sbjct: 150 GGKGNILMMHGFMGQAAQIKRDNGAKD-ILKANPGLKLLAEQSGEWDRAKGMSLTENWIQ 208 Query: 210 AYSD-LDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 +Y D ++AI A + A +A E KV +V V++GT+ + Sbjct: 209 SYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTLDATVFQN 268 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 +QG ++ A KK + + + + V + V Sbjct: 269 AKEQGGKAIETAVKAAKKEAFEKEVLIPFQLVDKGNVEGF 308 >UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET05_9FIRM Length = 336 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 103/277 (37%), Gaps = 8/277 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 AA + IA + F +GA++ ELG + ++ + Sbjct: 43 AAAAQGEGKDGYTIAVLAWSQAEEFGVDIISGAEKKAAELGNVTVVKPDPAGDMQKEIAI 102 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + + + QG +AI V+ V + + P + + + G+ ++ +D DT+ +C + + + Sbjct: 103 LEDLIQQGVDAICVAPVDANAIVPYIDKVREAGIVLVDYDIDTEAQCDAKVL---SDNAA 159 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 GG + Q + KV P VT + + K ++A+ P E+V Q Sbjct: 160 GGAMAADYLVQEMGTEGKVLILTEVPGVTTAEERIAGFKDRMAEIAPNVEMVE-QLSNGT 218 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE 256 T E +L+A+ D+ I + A A + V I G+ ++ Sbjct: 219 RDTHRATTENMLQAHPDITGIFCFMGDNSLGAYTACKTNNRQDVLIAGYDATPEQLDIMK 278 Query: 257 RG----TVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 + + G +++ A +L+ + Sbjct: 279 NDGPDCNLICSVALYPKKIGYVALETAYNILEGEEIN 315 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 121/322 (37%), Gaps = 8/322 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVG--VGFFTSGGNGAQQAGKELGV 58 MT I +L +G+ S + +I +PK + F+T GA+ +E G Sbjct: 18 MTAGFVLLILILITIGVLQDSSQNKRTYKIIMVPKTIDESNDFWTGLIEGAKLGAEEFGC 77 Query: 59 DVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 ++ G +E GQ +LI + + +A +++ S A++ A+ G++V+ DS Sbjct: 78 EIEVVGSDSEDDYEGQNRLIEESIKKNPDAFLIAPCSYTHTTEAVQEAINAGIKVILVDS 137 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 E + + T G + A+ + K +K+ + + + Sbjct: 138 VIDKEIANGVV--ATDNFKAGKELGTFAKTILKPDSKIGVVAHVKGSSTATEREDGIREG 195 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 + ++ + + + + E +LK ++D +I + + AA+ + + Sbjct: 196 LGEDQNRIQ--DIVYCNSSYDLASDLTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGM 253 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 D+V +VGF +E G + + G + V A ++ M+ Sbjct: 254 EDQVKVVGFDNSVEQIQLLEAGVFQGIVIQKPFNIGYLGVEQAVKAIEGYPMEYNLDSGC 313 Query: 297 KGVGQVEVSPNSVQGYDYEADG 318 K + + + Q Y G Sbjct: 314 KLITKENMYEEENQRLLYSFSG 335 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 5/250 (2%) Query: 42 FTSGGNGAQQAG-KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 F + GA + K E Q +++FV QG +A+I+S V D L Sbjct: 59 FMTMLQGAMELQLKNYDNVKLIINDAESQSDKQASQLDSFVAQGVDAVIISPVDADALAS 118 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 A+K + G+ V+T +D + ++ G+ + GG + + K K+A Sbjct: 119 AVKTVVDAGIPVITCSADVTGDQGQVWV--GSSNENGGEIEMKYVAEKLGGKGKIAVLRG 176 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP 220 + + K++P EIV Q G +++ E +L A ++LDAI+ Sbjct: 177 PLGAFAEQGRFAG-YETVLKDYPDIEIVFDQTGNWQREEAMALIENLLTAGTELDAIVCQ 235 Query: 221 DANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVA 279 + A +A + K D++ I G ++ G + D + QG ++ +A Sbjct: 236 NDGMALGALEAVKAAGKKDQITITGIDAIVDALDSIKAGELDATCFQDAIGQGTNALDMA 295 Query: 280 DALLKKGSMK 289 + +++ Sbjct: 296 VKAARGETVE 305 >UniRef50_A3DCF2 Sugar ABC transporter (Sugar-binding protein) n=4 Tax=Clostridiales RepID=A3DCF2_CLOTH Length = 321 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 120/350 (34%), Gaps = 45/350 (12%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAA------------ERIAFIPKLVGVGFFTSGGNG 48 M +A+ A + + + + L G+ ++ G Sbjct: 1 MKRFLVLLLAISLIFTFTACNSGSGSGNGQAKGYVGDPSDEYYMVTFLSGIDYWKYCFEG 60 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 + A K +GV Y G T+ VSGQV ++ + Q I V+AV+ L + A+++ Sbjct: 61 FEDAAKAIGVTAKYTGQTDTDVSGQVAVLEQVIAQKPKGIAVTAVNSTALADTINSAIEQ 120 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 G+ V+ +DSD+ RS Y+ GT G + K K+A Y+ + Sbjct: 121 GISVVCFDSDSPTSNRSAYL--GTGNYAAGQKAAEFLVPLVNYKGKIAVLYTV-GAENSE 177 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 V+ + + P +V D T + L+A D+ + D A A Sbjct: 178 SRVQGFEDWCKQNAPEVSLVKVNDA-GDTTVAADNLAAALQANDDIVGVFCVDGVAGTAG 236 Query: 229 AQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 A K D + ++ F + V+ G + + G S+ + Sbjct: 237 PTAVAESKKD-LRVLAFDVDVTVLDKVKSGEIDGTVAQGMYNMGYWSLMMLY-------- 287 Query: 289 KTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 + G+ + N G VI K+N+ +Y Sbjct: 288 -----TEANGLSSKALPGNLDTGV---------------VIVTKDNVDEY 317 >UniRef50_Q2LS58 ABC-type sugar transport system, periplasmic component n=2 Tax=Bacteria RepID=Q2LS58_SYNAS Length = 332 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 12/292 (4%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGA----QQAGKELGVDVT--YDGPTEPSVSGQV 74 SM ++ R IPK+V +F GA + K+LG+ VT Y P V+ Q Sbjct: 40 SMTLKKDLRFVIIPKVV-HPWFDEVNKGALYQAELLEKQLGIKVTVDYMAPKSADVAEQN 98 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++ + G + I + + G P + + ++G+ V+ +DS + N T Sbjct: 99 SILEKAASTGPDGIAIDPLVAIGNMPVIDKIRKQGITVIVFDSPSPKAGILSVGNDFTQQ 158 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 G++ + KVA PT + + + A + K++P IV Sbjct: 159 ---GVIAAERLVGLIGGTGKVAVMQGFPTAPNHKERYEAQIAVL-KKYPSITIVDGGIDN 214 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRP 253 +D + Q A+ +L + DL + DA+ A A + KV VG + Sbjct: 215 DDIQTAKQQAKSVLASNPDLKGYLCCDASGPIGIAAAIKEAGRVGKVKAVGMDGIKPILE 274 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 +++G ++ QG +S+ + + I + V Sbjct: 275 AIKQGALESSSSTIPRMQGSMSILMLWQASIGVPIPQRIDTGIDVITSDNVD 326 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 17/299 (5%) Query: 6 FKKIALLSALGIAAIS-------MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 F L+AL +AA S + E+I + + + FF++ GA++A +G Sbjct: 11 FTAAVTLAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAASIGA 70 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + ++ Q I+ F+ QG N I++SAV +G+ PA++RA Q G+ V+ D+ Sbjct: 71 TANTQD-AQLDLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDTP 129 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 K + Q G Q+ K V +P T + + Sbjct: 130 AKSADA---VVMTDAVQAGEKSCQYLFEQM-GGKGNVLLVDGTPLQT-IRDRITGC-NNV 183 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KN 237 K+ PG ++V Q ND L +L A D+ I + + A A + K Sbjct: 184 VKKFPGIKVVGQQASKNDRASGLAVTTDMLTATPDVQGIFGMNDPSALGAVLAVQQAHKA 243 Query: 238 DKVAIVGFS-TPNVMRPYVERGT-VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 V + G +P + + G+ + + + +V VA ++ L Sbjct: 244 GTVKVTGVDGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDNKPPAETTIL 302 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 113/286 (39%), Gaps = 6/286 (2%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 + F + FF + ++ E G ++ + Q+ ++ + + QG + Sbjct: 68 YKFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVID-AQNDAQKQISMVEDLLTQGIDL 126 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 + + + + +L++ + GV V+ +D+D I G ++ + ++ Sbjct: 127 LFLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDLVNTIIVSDNYYAGELVAEDMMKK 186 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + + +KV SP+ + K K A + ++IV+ G D SL AE + Sbjct: 187 L-PEGSKVCILT-SPSAEACIKRQNGFKDK-ADGY--FKIVSEIDGKGDTATSLGIAEDV 241 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 L+ DL A A + + QA E+ K V + G + + + GT++ Sbjct: 242 LQGNPDLGAFYAINDPSAIGCVQALESQKKTDVLVYGVDGQPMGKQAISEGTMEATAAQS 301 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + GK SV A +L S++ + + + V+ + G+ Sbjct: 302 PINIGKESVAAAYKILSGESVEKNILVPTFLIDKNNVTEYGLDGWQ 347 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 112/287 (39%), Gaps = 6/287 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEP-SVSGQVQ 75 A + FI K + F S +GA+ A + +++ GP P SV Q+Q Sbjct: 46 AQAADPSVKTYNFVFIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQ 105 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ + G +AI+++ G+ PA+++A G+ + T ++ +I G Sbjct: 106 LVEQAITDGADAILITPADSTGIVPAIEKANAAGIPIATPNTKAYGGDVLTWI--GVDNY 163 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + A + + KV + + + V K +PG E++ +Q Sbjct: 164 TVGYELGTALCEALEGTGKVVLIEGTAGNSTSTERVDGYLDAF-KNYPGIELLDSQPADF 222 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAI-VGFSTPNVMRPY 254 + K + E L+ Y ++D + + + + A +A + + DK + V F N Sbjct: 223 NREKGMTVMENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDNDCLDA 282 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 ++ G + G + Q ++Y + + + V + Sbjct: 283 IDAGDILITGAQEEKSQIANAIYACLLACNGYKVAPEQYIPMTLVTK 329 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 122/310 (39%), Gaps = 11/310 (3%) Query: 4 HRFKKIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 LL++ + S Q E + + F + + + ++ G++ Sbjct: 11 TTLSIFLLLASCNQSGTSETSQDGEGKKLVVGATMLSMQNEFIVNVHDEMDKEAQKAGIE 70 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + E S QV+ + +F+ Q +AII++ + PA+ +A+ + ++ +S+T Sbjct: 71 LITVD-AERSALKQVEQVESFIAQKVDAIIMNPCEVEASSPAVAKALAAKIPIINVNSET 129 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + ++ + + + A ++ K V + Q + + A+ I Sbjct: 130 SSKPSAFV--GSDDVESARIAMKFIADKL-GGKGNVVMMHGYMGQAAQIKREQGARE-IL 185 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAY-SDLDAIIAPDANALPAAAQAAENLK-N 237 K++P +++ Q G D K++ E +++Y S ++A+ A + A +A + Sbjct: 186 KQYPNLKLLAHQTGEWDRAKAMSLMENWIQSYGSQINAVFAHNDEMGLGAVKALTDAGLK 245 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 DKV +V V++G++ + QQG ++ A K + + Sbjct: 246 DKVIVVSIDAIPDALQAVKKGSLDATVFQNAEQQGAKAIATAIKAAKGQPFDKETLVPFQ 305 Query: 298 GVGQVEVSPN 307 V + +S Sbjct: 306 LVTKDNLSKF 315 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 8/268 (2%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGY 85 ++ + K + F+ GA+QA ELGV++ G E V Q+ LI+ + G Sbjct: 35 KPKVLLVMKSLVNPFYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQLAAGI 94 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS-----YYINQGTPAQLGGML 140 +A++++ + P L RA + GV+++ D+ + GG Sbjct: 95 DALVIAPADSIAILPVLIRANELGVKIVNIDNRIDTNAIQRAGLPAIPFVSVDNEFGGYE 154 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 ++ AK + + + A+ + + E+V ++ + Sbjct: 155 AGKILAELAGPDAKALIIEGPRSAINARERRDGARRALQEN--NIEVVASEVASWKLESA 212 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + + +L+ I A + A A+ + I GF R V G + Sbjct: 213 YALTQNVHARNPELNVIFAANDMMALGALLYAQEHGLNDWLIAGFDNIPDARAAVREGRL 272 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSM 288 +QG V A LL ++ Sbjct: 273 AVTIDQQADRQGYQGVATAVDLLNDKAV 300 >UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax=Thermotoga RepID=B9KBM0_THENN Length = 327 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 108/295 (36%), Gaps = 16/295 (5%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLV-GVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 ++ + + +++ + + F+ G + AG++ GV+ Y GP Sbjct: 17 RMRRVLIFLMVVLAVFGFSKYTFYLVSHGGPADPFWAVVMKGLKDAGEKYGVETVYLGPE 76 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW---DSDTKPEC 123 + S+ + L+N+ + + + +IV+ +P L L++A++ G+ V+ D+ E Sbjct: 77 KYSLKEFIDLVNSAIARKPDGLIVTITNPVALDEPLRKAIKMGIPVVAINVPDTRPPEEA 136 Query: 124 RSYYINQGTPAQLGG-MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 Y + G L G ++ +A +A P K +++++ Sbjct: 137 IPYLVYVGMDEYLAGVYAARRMLQEFTPKRAVIAIHE--PGHAGLEARAKGIMDVLSEKN 194 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANAL-PAAAQAAENLKNDKVA 241 E + D TK+L + L + D DAI PA E KV Sbjct: 195 IPVEKLDI---TTDPTKALSIMKSYLMKHPDTDAIFTLGPLGAHPAIQLVEEEGLKGKVK 251 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISV-----YVADALLKKGSMKTG 291 I + ++ GTV QG + V Y L+ + TG Sbjct: 252 IGAIDLTTKIIEAIKDGTVLFTIDQQQYLQGYLPVVFLYLYKEYGLIPHEKVLTG 306 >UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5ENT7_9FIRM Length = 627 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 109/298 (36%), Gaps = 7/298 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + IA I + + GAQ+A ELGV V + P + Q++ +NN V+ Sbjct: 60 AAGSGTMIALITMDSIDQHWVTLNEGAQKAAGELGVTVQFMAPNTKDDAQQIECVNNAVS 119 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQG-TPAQLGGMLV 141 G AIIV+A PD + ALK A GV+++ DS + + + + G + Sbjct: 120 AGAKAIIVAANGPDAISSALKEAQSSGVKIVYVDSPANVDAEATFSTDNKAAGKTAGEEM 179 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 A + + + ++ + G+ ++ TQ+G DA KS Sbjct: 180 LKALSAAGVTSGSIGIINVNAATDSCVMREEGFRSAFEGK--GFTMLETQYGEGDAAKSQ 237 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK 261 AE + + I + + A A + D + VGF + + + G + Sbjct: 238 SIAENYITQG--VVGIFGCNEGSTTGAGNAIKASGKDGIIGVGFDKSDAIMGLIGDGYLL 295 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGN 319 + G V A A + S+ G K+ GV + + E Sbjct: 296 CTMAQNPDVMGYEGVKAAVAAVGGESL--GGKVTDTGVSVLTAQGGTASAAAGETTAK 351 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 110/287 (38%), Gaps = 11/287 (3%) Query: 9 IALLSALGIAAISMN------VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 +++L+A G A + RIA I + + GAQ+ + LGV VT+ Sbjct: 331 VSVLTAQGGTASAAAGETTAKASKEYRIALITMDSIDQHWVTLNEGAQKEAEALGVSVTF 390 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P + Q++ +NN V GY AI+V+A PD + ALK A GV+++ DS + Sbjct: 391 MSPNTKDDAQQIECVNNAVAGGYEAIMVAANGPDAISSALKEAQSSGVKIVYVDSPANVD 450 Query: 123 CRSYYINQG-TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + + G + A + + + ++ + Sbjct: 451 AEATFSTDNKAAGRTAGEEMLKALEAAGVTSGSIGIINVNAATDSCVMREEGFRSAFEGK 510 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 G+ ++ TQ+G DA KS AE + + I + + A A + D + Sbjct: 511 --GFTLLETQYGEGDAAKSQSIAENYITQG--VVGIFGCNEGSTTGAGNAIKASGKDGII 566 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 VGF + + ++ G + + G V L+ S+ Sbjct: 567 GVGFDKSDAILGLIDDGYLLCTMAQNPDVMGSKGVEACVKALEGDSL 613 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 109/286 (38%), Gaps = 5/286 (1%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 + L + + + V + +A I ++ ++ + GA+ A KE ++ + Sbjct: 16 FLVAVTLFYSCSASLTDVVVDKKKTVALIVRMKHGDYWRTVKLGAEMAAKEYERNLNFYA 75 Query: 65 PT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 P E Q++L+ + G I+V+ L A+K +R + +L D+ Sbjct: 76 PDYEEDAQRQMELVQQAIADGSETIVVAPSDERVLREAIKLTRERAIPILVLDTVGNDSA 135 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 YI GT G + + K ++ + + + + + +E Sbjct: 136 VKSYI--GTDNYDMGRKAFEKMVYLIEKKGQIVLLGTDRIKANAKRREQGVLDLLPREM- 192 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAI 242 E+V + +D + + +++ + L +IA D++ A+ E+ DKV I Sbjct: 193 QVELVANENAPSDKKQIGEWTRELIRKHPQLKGVIALDSSTAIGVAEELESSGLRDKVKI 252 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 V +P + Y++ G + + + G + V A ++ Sbjct: 253 VAIDSPPEVLEYLQEGIISATIIQKPLSMGYLGVKYAVEASNGEAV 298 >UniRef50_B9XKI8 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=bacterium Ellin514 RepID=B9XKI8_9BACT Length = 318 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 17/261 (6%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG------VDVTYDGPTEPSVSGQVQ 75 + + I + K G F + GA A KELG + + + P E Q + Sbjct: 20 AQTKKSYTIGLVAKSQGNPVFQAARVGAVDAAKELGKKYDINIKIDWRTPNEEDAQKQAE 79 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 I V G + I VS + L A+ A++ GV V T+DSD R + + Sbjct: 80 AIEQLVLAGADGIAVSCSDANKLTDAINSAVKNGVPVATFDSDAPASKR-FVTYGVDDIK 138 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G +++ A+ V K +A + + + V+ K AK++PG I T + Sbjct: 139 CGEQVMEELAK-VMGGKGVIAILAGNQNAPNLQKRVQGVKNA-AKKYPGITIRDTYYHKE 196 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN---DKVAIVGFSTPNVMR 252 + E +++A D+ + +N + V Sbjct: 197 TPQDAAAKVEQVMQANPDITGW-----AMIGGWPLFTDNALKWQAGTIKCVSVDALPAEL 251 Query: 253 PYVERGTVKEFGLWDVVQQGK 273 Y++ G V+ V + G Sbjct: 252 AYLKSGHVQILLAQQVYEWGY 272 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 8/288 (2%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + R +L + A+ +AE I F+ + + ++ + V + Sbjct: 1 MFRKSLSRILFSGVALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEV 60 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 + +S Q+ + +F+ +G + II+S V G+ A+ +A + G++V+T D Sbjct: 61 SIANQ-DLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPANNV 119 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + ++ GT GG + +K VA PTV ++ K IAK + Sbjct: 120 DVTSFV--GTDNFAGGEKAAELMAKTIGEKGNVAVIDY-PTVQSVVDRIEGFKKGIAK-Y 175 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP-DANALPAAAQAAENLKNDKVA 241 P +IV Q G ++L A+ IL+A D+ I D AL AA+ ++V Sbjct: 176 PDIKIVAIQPGIT-RPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLENQVK 234 Query: 242 IVGFSTPNVMRPYVERG-TVKEFGLWDVVQQGKISVYVADALLKKGSM 288 ++GF R V+ + Q GK++V A ++K + Sbjct: 235 VIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEV 282 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 108/271 (39%), Gaps = 10/271 (3%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I V +F+ G +EL V++ + + Q+ I F+ +G + II Sbjct: 57 IGVASPNNKVPYFSKLVEGMTDLQEELNVELDVQDAQD-DTNTQINQIQTFIAEGCDLII 115 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWD-----SDTKPECRSYYINQGTPAQLGGMLVDMA 144 + V + L P + + ++T D SD K + G GG Sbjct: 116 MMPVQLESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGEL 175 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 Q+ D+ +A + + Q + + +++ PG EIV Q D ++++ Sbjct: 176 VHQLLGDEGSIALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAITVT 235 Query: 205 EGILK--AYSDLDAIIAPDANALPAAAQAAENLKNDKV--AIVGFSTPNVMRPYVERGTV 260 + L A ++DAI+A D + A A ++ D++ ++G+ P+ + ++ + Sbjct: 236 QNFLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDM 295 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 L G +++ VA L +GS + Sbjct: 296 YGSTLQAPYDMGALTLQVAYQCLTEGSEEIE 326 >UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Synergistaceae RepID=C1TNC1_9BACT Length = 338 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 99/272 (36%), Gaps = 10/272 (3%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFV 81 ++ ERI + + ++ + + KE+G+ V PTE + Q+ + V Sbjct: 45 DITGQERIGVLVITLSNPYWVTMKERYGEWAKEMGISVEVMAAPTEKDLKSQLNTLEAMV 104 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT----WDSDTKPECRSYYIN--QGTPAQ 135 + Y+ IIV+ + P L P + +A ++G+ V+ D + + T Sbjct: 105 AKKYDGIIVTPMDPFNLIPGIVKADEKGIPVVCSGPEVSRDGLKQAGAVMDGWITATFKD 164 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + + A ++ +VA P + A K G ++V + G Sbjct: 165 QGRLCAEDMAEKLPSGS-EVAIIEGIPGAGQSKARREGASEGFEKA--GLKLVAVEAGNW 221 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D ++ ++KA+ L I + AA A E + V + G + Sbjct: 222 DRNRAYDITTNLVKAHPQLKGIYCANDVMALAAVDALEVAGIEGVTVYGTDFIPEAAEAI 281 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 + G + + + ++ L+KK Sbjct: 282 KSGRLAGSTTFSQAAWTRGTLVYTLKLIKKDE 313 >UniRef50_C1F7H1 D-ribose-binding periplasmic protein, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7H1_ACIC5 Length = 407 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 103/262 (39%), Gaps = 24/262 (9%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLINNFV-NQGYN 86 RIA IP+ G + +GA+ A + V + ++ PT E ++ Q+ L+ + ++ Y+ Sbjct: 115 RIAIIPQTTGTPLWGPMFDGARLAATDQHVSIYWNAPTSEDNIKAQIALLERVIHSKKYS 174 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD--TKPECRSYYINQGTPAQLGGMLVDMA 144 II++ L A++ A + V+ + P Y+ GG Sbjct: 175 GIILAPDHDLALMSAVQDAEAAHIPVVIVSTGLRLPPNGDLSYVLNNDAE--GGKWAANY 232 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 ++ VA P + Q + + + + +P I +FG + Q A Sbjct: 233 LGKLLHGHGTVAVIGIDPAILGNLQRERSFETTLHESYPNISIAARRFGDYNVPHQTQIA 292 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENL-----KNDKVAIVGFSTPNVMRPYVERGT 259 ILK + + AI+A + PAA + N K +V ++GF + V G Sbjct: 293 ASILKRFPSISAIVAVN----PAAERGTWNTLLADDKTHRVKVIGFD-----QDIVVDGE 343 Query: 260 ----VKEFGLWDVVQQGKISVY 277 + + + G+++V Sbjct: 344 GQIRINAIVCQNTYKIGQLAVQ 365 >UniRef50_A9KMJ5 Transcriptional regulator, LacI family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMJ5_CLOPH Length = 352 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 117/309 (37%), Gaps = 14/309 (4%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTYDGPTEPSVSGQVQ 75 A +++ + + R+ + F+ G +QA KEL GV+VT S Q+ Sbjct: 54 AGALSRKKSIRLGIVYCENHAEFYDYVTRGIEQAAKELQFYGVEVTQWKTLNISWEEQLA 113 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ + + Y+ +++ + R ++ G+ VLT+++D R YI GT A+ Sbjct: 114 LLESIDIKEYDGFAINSAGMKT-DAMINRMVELGIPVLTFNTDAPATNRFCYI--GTNAR 170 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G L ++ + KVA S + I +E+P + +N Sbjct: 171 GAGNLAGELIGKLMGQEGKVAALGSFLATNSFIERFIGFYEVIQREYPNITLCPHSECFN 230 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D + ++K D+ A+ ++ A +A + L + +VG+ + Sbjct: 231 DTQSAYYETLRVIKENPDIKALYITGSSGTVGALEAMKELGRKDIILVGYDITKTTIQAL 290 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + G D QG +V V + +G + + V + Y+ E Sbjct: 291 KDGWCTAVLYQDPYFQGYQAVKVLAKHILEG--------FVPRTPLLTVDTKIMMKYNLE 342 Query: 316 ADGNGIVLL 324 GN + L Sbjct: 343 ECGNTALFL 351 >UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TUU8_ACIAC Length = 318 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 13/308 (4%) Query: 1 MTLHR--FKKIALLS-ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 MTL+R + A+L+ A G+ A Q ++A + K + FF + +GA+ K Sbjct: 1 MTLNRRTLQTAAVLALAGGLFAQPAFAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHA 60 Query: 58 VDVTYDGP---TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 + T E + Q+++I V Q NAI+++ L PA+K A+ +G+ V+ Sbjct: 61 SEYTLVANGIKNETDTAAQIKMIEQAVAQKVNAIVLAPADSKALVPAVKAAVDKGILVVN 120 Query: 115 WDSDTKPEC----RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQW 170 D+ G + G LV + K KV T + Q Sbjct: 121 IDNRLDANALKEKSLNVPFVGPDNRAGAKLVGDYLAKQLKAGDKVGIIEGVSTTFNAQQR 180 Query: 171 VKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA-LPAAA 229 + + +V Q G + K A G+L+ + DL A++A + + L A A Sbjct: 181 TLGFQDAMKAA--NINVVGVQSGQWEIEKGNTVAAGMLREHPDLVALLAGNDSMALGAVA 238 Query: 230 QAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 K KV +VG+ N ++P + G V +Q + +A L + + Sbjct: 239 AVRAAGKAGKVQVVGYDNINAIKPMLADGRVLATADQYAAKQAVFGIEMALKALAAKTPQ 298 Query: 290 TGDKLDIK 297 ++K Sbjct: 299 AQLPAEVK 306 >UniRef50_C5CYD2 Sugar ABC transporter n=17 Tax=Proteobacteria RepID=C5CYD2_VARPS Length = 346 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 105/251 (41%), Gaps = 6/251 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLI 77 AA + A++ + GV ++ +Q G+ LGV Y G E V+ Q+ Sbjct: 30 AATGLRGNASDVYVMNVMVSGVEYWFPVYEMMKQLGRTLGVRTRYTGTPEYDVNKQLASF 89 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 + + I++ ++PD + RA+ G+ V+T+ +D+ R+ ++ + Sbjct: 90 EQELARKPAGILLHPMNPDPFIEPINRAVAMGIPVVTFAADSPNSKRASFVTSDNDRE-- 147 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G A K + A +P + ++ + ++ +H G ++V D Sbjct: 148 GTQAADAIAAALGGKGEYAVLE-NPGQDNHDRRIAAFVNRMKTKHAGMKLVGRAASNQDP 206 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 +K+ Q + +A +L A+ P+AN+ AAQA K + + ++ + ++ Sbjct: 207 SKAYQAVLSLAQANPNLGALFMPEANSALGAAQAKIESKKN-IRVMCCDVNAKILDMIKA 265 Query: 258 GTVKEFGLWDV 268 G V FG + Sbjct: 266 GDV--FGAINP 274 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 121/339 (35%), Gaps = 32/339 (9%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M R AL + + A + Q ++ I ++ + G A++ ++LG + Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + + + + I+ + AII+ + DG A+++A++ G+ V +++ Sbjct: 63 DV-SSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEIN 121 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + AQ + + V D A+ +P+ + + Sbjct: 122 QQGLAEAQLVSNNAQGAALGAQQWIKSV-GDSARYVELKGAPSDNNAATRSNG-YETVLS 179 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DK 239 ++PG E V + D T+ + +L+A D+D +I+ + A A + D Sbjct: 180 QYPGLEKVGSDVANWDRTQGFNKTQSMLQANPDIDGVISGNDEMALGAISALKEAGKLDD 239 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + GF V+ G + L V +++V +AD + G Sbjct: 240 VVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYVTTG------------- 286 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 E +G L + + +N+ Y Sbjct: 287 ---------------ETGVDGEKQLFDCFLITSDNVDDY 310 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 12/290 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLV--GVGFFTSGGNGAQQAGKELGVDV 60 + K+ A+ +A+ S N+ A + L+ F+ + GNG ++ K +++ Sbjct: 1 MKNLKRF-TAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINL 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + ++ Q+ I + + + +AI++S V G+ LK+A + + V+T D + Sbjct: 60 KVSVANQ-DLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVDIGAE 118 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 +I T GG++ A + K +V P ++ ++ + +A Sbjct: 119 NSKIVSHI--ATDNYGGGVVAGKLAVKQLGGKGQVVMLSY-PGISSVEARLQGFRDAVAD 175 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 +IV Q G +S+ + +L+A D D I A + + A A K+ V Sbjct: 176 T--DIKIVAVQPGKT-REESMTSTINMLQANPDTDLIFAFGDDMMIGAGLAVTKQKSKAV 232 Query: 241 AIVGFSTPNVMRPYV-ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 ++GF V E + D GK ++ V L +K Sbjct: 233 -VIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVADYLNGKEVK 281 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 102/326 (31%), Gaps = 21/326 (6%) Query: 1 MTLHRFKKIALLSALGIAA-------------ISMNVQAAERIAFIPKLVGVGFFTSGGN 47 M F +A L + + I + FF G+ Sbjct: 1 MKHRLFIALACLLTVFAGCNKSENASTSTDTQPPTGSASKGTIGVSLLTLDNPFFKVIGD 60 Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GK+ G D + V+ Q I +F+ + +AI++S + P ++ A Sbjct: 61 NIVSEGKKRGYDAVVV-SGDKDVAKQSNQIKDFIVKKVSAIVLSPCDSKSIVPVIQEANA 119 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA-RQVNKDKAKVAFFYSSPTVTD 166 G+ V T D T GG A + + K+A + Sbjct: 120 AGIPVFTVDIPCHEPGVKIATQIATDNYGGGKEAAKAMIEALGEAGGKIAILHFKQ-AES 178 Query: 167 QNQWVKEAKAKI----AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 VK + I A+ +IV + + AE L+A DL I A + Sbjct: 179 CQLRVKGFREIIDAHNAEGKSKVDIVAELESGGAKDQGYKAAEDTLQANPDLHGIFAIND 238 Query: 223 NALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 A A A E K D+V IVGF + ++ G + + + G V Sbjct: 239 PAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGKIYADPIQFPDKMGAQIVDAIIQ 298 Query: 282 LLKKGSMKTGDKLDIKGVGQVEVSPN 307 K ++ + + + + Sbjct: 299 QSKGETLPPQMLIPTSLYKKADAEKD 324 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 10/293 (3%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK---ELGVDVTYD---GPTEPSVSGQVQ 75 + V+ ++ I K F+ + NG +Q+ K + GVDV+ E GQ Sbjct: 67 VKVKGGLKMGAIAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQT 126 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + +N VNQGYNA+++S +S L ++ A + + + + Y Q Sbjct: 127 MTDNLVNQGYNALMLSPISDSNLTASVDNAKGKKIPTINVNDGLIASAD--YFVGPDAYQ 184 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + + ++Q+ DK VA + K I + G +V Q Sbjct: 185 NGELAAEWVSKQL-GDKGDVAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQNADW 243 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D K+ + A ++ DL AI + + +A E K D + +VG + Sbjct: 244 DRQKAKELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKKD-ILVVGVDGIGEAYDSI 302 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 G + +++ V +L + + + V ++ Sbjct: 303 RAGKLDATVDSFGYYMSQVATEVTLRVLAGQDIPRVTHTPQALIDKTNVDKDA 355 >UniRef50_Q2RUM9 Ribose ABC transporter, periplasmic binding protein n=2 Tax=Rhodospirillales RepID=Q2RUM9_RHORT Length = 312 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 113/311 (36%), Gaps = 17/311 (5%) Query: 9 IALLSALGIAAISMNVQAAER------IAFIPKLVGVGFFTSGGNGAQQAGKEL------ 56 +++++A+ I+++ M A E+ +PK+V +F +GA+ A + L Sbjct: 6 VSVVAAMAISSLPMVASAQEKSTDPLRFVLVPKVV-HPWFDKVNDGAKAAAEMLTTTTGR 64 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 V V Y P + V Q +I + + I V + G L+ A ++G+ V +D Sbjct: 65 KVTVEYRAPQKADVVEQNDIIARSIATRPDGIFVDLLDEKGNRAVLEEAQEQGIPVTVFD 124 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 S I Q + ++ K +VA PT + K + Sbjct: 125 SVAPEGMNLTSIGNDFCEQA--TIASTRLVELMGGKGEVAIMMGVPTAPNHAIRAKCHEQ 182 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 AK +P ++V T + + + A I++A+ +L +A DA QA + Sbjct: 183 TFAK-YPDIKLVATGIDNDSIETAQKQAAAIMQAHPNLKGWVASDAAGPIGIGQAIKEAG 241 Query: 237 N-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 KV VG + ++ G V QG +V Sbjct: 242 KVGKVFEVGLDDLPDLLALIKEGVVDSSSSTKPEMQGYWAVIATWQKAMGMPTPKYIDTG 301 Query: 296 IKGVGQVEVSP 306 I + + ++ Sbjct: 302 IAVITKESLAK 312 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 119/314 (37%), Gaps = 10/314 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLV---GVGFFTSGGNGAQQAGKELGVD 59 + RF +A L AL + A + N + + F+ G ++ + + Sbjct: 7 VRRFWWLAALCALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQKLT 66 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 V D E ++ Q + N+ Q AI+V G+ PA+ RA Q + V T D Sbjct: 67 VRLDA-GEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTADIRA 125 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 K +I + GG L A + + +VA P + + V+ + + Sbjct: 126 KEGAVVSHI--ASDNVAGGRLAGEYAAKRLNGRGQVAIID-QPYIQSVIERVRGFEEAL- 181 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 K +P +V G +SL+ AE +L++ LDA+ A + + A E Sbjct: 182 KPYPNIRVVARLTGDGVRDRSLKAAEDLLQSQRKLDAVFAVNDESAFGVVSAIEAAGRKG 241 Query: 240 VAIVGFSTPNVMRPYVERGT--VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + ++G+ R + G ++ D + G+ ++ L ++ + ++ Sbjct: 242 IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIRAVATHLAGQPVEPVIPVPVR 301 Query: 298 GVGQVEVSPNSVQG 311 V + + ++ Sbjct: 302 LVDKAALGNETLTP 315 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 8/272 (2%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 + + I F+ S + ++ V + + ++ Q+ I + Sbjct: 31 PTETGEKTYTIGVSLLTQQHPFYLSLKDAIEKEAAAQNVKLNVSIANQ-DLNKQISDIED 89 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 F+ + +AII+S V G+ A+K+A + V+T D + ++ T GG Sbjct: 90 FITKKVDAIIISPVDSKGVLAAVKKAEAANIPVITVDVPAIGVDVAAHV--ATDNYTGGK 147 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ K +VA PTV Q ++ K IAK +P +IV Q G + Sbjct: 148 IAGEEMARLLNGKGEVAVIEY-PTVDSVVQRIEGFKEVIAK-YPDIKIVAIQAGIT-RPE 204 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYV-ER 257 +L A+ +++A +L I +A AA A ++ D++ ++GF R V + Sbjct: 205 ALTAAQNMIQANKNLGGIFGFGDDAALAAVAAVKSAGKEDQIKVIGFDGMQEARDAVTKE 264 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 + GKI+V +LK ++ Sbjct: 265 KSFAAVITQYPEDMGKIAVDTTLKILKGEQVE 296 >UniRef50_A9EQW5 Ribose transporter, periplasmic binding protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EQW5_SORC5 Length = 340 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 118/305 (38%), Gaps = 27/305 (8%) Query: 2 TLHRFKKIALLSALGIA-----AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 ++ RF A ++A A + ++A+I V F+T G KE Sbjct: 4 SISRFIVGACVAAGLAALGCDNGGAPAAGGKPKLAYITNGVA-PFWTIAEKGVIDGAKEH 62 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 V+V+ P+ V+ Q+ + + + +G + I +S + + P L +A +++T D Sbjct: 63 NVEVSVVMPS--DVNDQLHRVEDLLIRGVDGIAISPIDAENQVPLLNKA-AAKTKLITQD 119 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SD R YI G + G + ++ KVA + + + Sbjct: 120 SDAPKSDRIVYI--GIDNYVAGRMAGQLVKEAIPGGGKVAILVGRLEGDNARKRRQGVLD 177 Query: 177 KIAK---------------EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 ++ + + IV T DA K+ AE ++ A+ DL +I + Sbjct: 178 ELLDRQDTSAGNDPLNQELKGAKYTIVATLTDQIDAAKAKSNAEDMMSAHPDLVGLIGLN 237 Query: 222 ANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 A PA +A + + +VGF + ++ G V + + GK SV V Sbjct: 238 AYHTPALLEAVKQAGKMSAIQVVGFDEQDATLRAIQDGEVVGTVVQNPYMYGKESVRVLA 297 Query: 281 ALLKK 285 AL++ Sbjct: 298 ALVRG 302 >UniRef50_A9KIC5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridium phytofermentans ISDg RepID=A9KIC5_CLOPH Length = 325 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 107/284 (37%), Gaps = 8/284 (2%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGV--GFFTSGGNGAQQAGKELGVDVTYDGPT 66 + L A I ++ + IPK++ F++ GAQ A KE + + + P Sbjct: 15 LTLSLAFFIYIRTLEKPKQYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAPE 74 Query: 67 -EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 E Q +LI + + + I+++A + A K G++++ DS K + Sbjct: 75 KEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSGMKQD--I 132 Query: 126 YYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 I T G+ + + + + K+ + K ++ + Sbjct: 133 ADITVATDNIQAGIRIGAVTKNLVRKSGKIGVISFVKNSKTAMDREEGLKIGLSDDSNKI 192 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVG 244 E + ++ K+ +L Y D+ ++ + + AA+A +++ KV +V Sbjct: 193 E--AIYYCDSNYDKAYDGTVELLTKYPDISVMVGLNQYSATGAARAIKDMSLEAKVKLVC 250 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 + Y+E G + + G + V A LLKK + Sbjct: 251 IDSSMEQIQYLEEGIFEAMVVQKPFNIGYLGVEKALKLLKKEYV 294 >UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5Z3_LARHH Length = 332 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 10/284 (3%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQG-Y 85 RIA + K + +F GA+QA E ++ E S+ Q+Q I++ +N Sbjct: 49 PRIALVMKSLSNPYFIEMEKGARQAQTENRAELFVKAVGLETSIDQQIQFIDDIINNKLA 108 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI-----NQGTPAQLGGML 140 +AII+ L P + RA + G+ ++ D+ + + G Sbjct: 109 DAIIIVPADSSRLAPVIARAHKAGIHIINLDTRLDADALAQEGIGPLPFIGVDNHRAAYK 168 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 K++VA + + + + A+ + E G +V +Q ++ Sbjct: 169 AAAHLAASLPPKSEVAIIEGNSNAINALRRSEGARQAL--EAAGMRLVPSQSS-WTIEQA 225 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + +LK +L I + + +V + GF R + + Sbjct: 226 YEITGNLLKQNPELRGIYCISDLIALGVIRYLADHGIRQVKVAGFDGIAQARAALASNQM 285 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 +QG +SV A + + K++ + + + V Sbjct: 286 VATVDQRPAEQGYLSVKAALDAIAGKPVTGQIKVETELLTRTSV 329 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 104/291 (35%), Gaps = 7/291 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDVTYDGPTEPSVSGQVQ 75 + S + IA++ + V F+ +G + K GV VT + + + Q+ Sbjct: 44 SGASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKD-NANTQLA 102 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + + + + I++S L A + G+ V+ D T +I+ T Sbjct: 103 NVQDAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTDSGEYVSFIS--TDNS 160 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + ++A + + + + I ++ E+ Q Sbjct: 161 GGAKKLGEYVADKLNKGDEIAQIALNQARKNGVLRKEGFEEGIKEKLK--EVDFRQMEKV 218 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 + + ++ + ++ +Y +L I + A A + + NDK IVGF + + Sbjct: 219 NRDEGVRYTQDLITSYPNLKCIFCHSEDPSMGAVTALKEINNDKCKIVGFDCSPEVVEAI 278 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + G + V G+ +V L G+ + +D V Q ++ Sbjct: 279 KSGDILATAAQQPVFMGRTAVDCLKTHLDGGTPEKEISVDTLLVTQDNIND 329 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 107/285 (37%), Gaps = 1/285 (0%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 + KK+ + S L + + +I F T Q K+ G Sbjct: 2 KLKKLIVTSVLMCMLPASVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDGNVSGQFE 61 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 + ++ Q+Q I NFV+QG +AII++ V G+ P +K A + ++ + + Sbjct: 62 DAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVTLP 121 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + G+ ++L G L ++ K V + + ++A ++PG Sbjct: 122 AGMAYVGSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRG-VEEVAAKYPG 180 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 +I+ Q +++ +DAI + + A A + K V + G Sbjct: 181 IKILDKQTAKWGRKEAVDITTDWALTGQQIDAIASNNDEMAIGAILALKQAKKSGVLVAG 240 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 Y+++G + D QG+ +V A L+K ++ Sbjct: 241 VDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVE 285 >UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic component n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7D2_HAHCH Length = 318 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 109/300 (36%), Gaps = 7/300 (2%) Query: 3 LHRFKKIALLSALGIAAISMNVQA---AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 + R A L AL S QA ++ + K ++ GAQ+A E GV Sbjct: 11 VRRLSVCAALLALVWLIASPLSQADIHQPKLLLVLKGDSNAYWRQVYLGAQKAADEAGVT 70 Query: 60 VTYDGP-TEPSVSGQVQLINNFVNQ-GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 + + + ++GQ+Q+++ ++Q +A+I++ S + L P++ + R + VL DS Sbjct: 71 LLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDS 130 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 D + + A + A + +A +Q + Sbjct: 131 DLAGDAHQGLVATDNYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDV 190 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 + K H I+ + +D + +LK +D + P+ + A A Sbjct: 191 LRK-HDKIRIIAAPYAGDDRGAARSEMLRLLKETPTIDGLFTPNESTTIGALVAIRQSGM 249 Query: 238 DKVA-IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 K +GF + + G + + + G ++V A L++ + + Sbjct: 250 SKQFGFIGFDQTEELEAAMYAGEISNLVVQNPEYMGYLAVQRALDLVRGKPIPAFTDTGV 309 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 106/291 (36%), Gaps = 5/291 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK-ELGVDVTYDGPTEPSVSGQVQ 75 A S + I + + +G ++ K + V+V Y S Q+ Sbjct: 46 TAQTSGDKSGKIVIGAALPDFDDKWLSYLQDGMKEYEKTQKDVEVIYVDAMN-DASKQLS 104 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + NF+ Q +AI++ V + +A Q + ++ + G+ + Sbjct: 105 QVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNR-IFDGVDKATAYVGSESI 163 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G++ ++ K K+A Q + + K I K++P ++V Sbjct: 164 KAGIMQMEEVAKLLNGKGKIAIMNGQMGHEAQIKRTEGNKQVI-KKYPDMKVVLEGTAEW 222 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE-NLKNDKVAIVGFSTPNVMRPY 254 D K + E L++ +DA++ + A A E K D V + G Y Sbjct: 223 DRAKGMSLMENWLQSGKKIDAVVCNNDEMAIGAIMALEDEGKLDDVIVAGVDATPDALEY 282 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 V+ G +K + QG++ + VA K ++ + + + V + V Sbjct: 283 VKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEKVEKFNWIPYELVTKDNVE 333 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 106/282 (37%), Gaps = 7/282 (2%) Query: 11 LLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSV 70 L A+ + S A+ RI V F T +G ++A ++ V + ++ + V Sbjct: 6 LFIAVLLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQFED-AQGDV 64 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS--DTKPECRSYYI 128 Q+ + F++Q +A+IV V + A++ + ++ + D + + Sbjct: 65 VRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGVTT 124 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 + G + + A ++ K +A + + K ++ K++PG IV Sbjct: 125 VASNDIEAGQLQMRYLAEKM-GGKGTIALIMGDLAQNSTHDRSEGVK-QVLKDYPGITIV 182 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFS 246 Q K + L A DAI+A + AA A + +VAIVG Sbjct: 183 EQQTAEWQRNKGMDLTSNWLLAGRTFDAIVANNDEMAIGAAMALQQAGKAKGEVAIVGID 242 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 ++RG + D Q ++ A ++K + Sbjct: 243 GLPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPV 284 >UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Tax=Proteobacteria RepID=B5XQK7_KLEP3 Length = 317 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 115/314 (36%), Gaps = 13/314 (4%) Query: 1 MTLHRFKKIALLSALGIAA-----ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKE 55 M L K+ LL+ IS A A + FF GAQ A K Sbjct: 1 MMLFHTGKLRLLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKA 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 G D+ + V+ Q I N++ QG I+V+A+ +G+ PA+K A + V+ Sbjct: 61 SGKDLVIFNSNDNPVA-QNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAI 119 Query: 116 DSDTKPECRSYYINQGTPAQ---LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK 172 D+ ++ + +G VD +++ + QNQ K Sbjct: 120 DAVLPAGPQAAQVGVDNIEGGRIIGQYFVDYVQKEMGGQAR--LGIVGALNSAIQNQRQK 177 Query: 173 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 + + K +P I G N K++ AE ++ DL AI A AL A A Sbjct: 178 GFEETL-KSNPKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAV 236 Query: 233 ENLKNDK-VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 EN K + + G+ ++ G V D + G ++ +++ ++ Sbjct: 237 ENQGRQKDIKVFGWDLTAKAISGMDGGYVTAVLQQDPEKMGAEALNALNSITSGKTVPKT 296 Query: 292 DKLDIKGVGQVEVS 305 + V + V Sbjct: 297 ILVPATVVTKANVD 310 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 110/285 (38%), Gaps = 13/285 (4%) Query: 8 KIALLSALGIAAISMNVQAA----ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 + + ++G+ + AA +I FF A+ GK +G +V Sbjct: 17 AVCVFGSIGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEVLSQ 76 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 E V Q I+ F+ G I++ A DG+ PA+KRA+ G+ V+ D+ +K Sbjct: 77 VANE-DVQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQSK--- 132 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 + +N T + G + + K K+A +P V+ + V K I ++P Sbjct: 133 -NATVNITTDNKQAGEISCRSLADKLGGKGKIAILNGTP-VSAVDDRVTGCK-GILGQYP 189 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIV 243 +IV Q G N +L A IL A DLD A + + AAE K V I Sbjct: 190 DIKIVADQRGENSRDSALPIATDILTANPDLDGFFAINDPSAVGVQLAAEQ-KGASVVIT 248 Query: 244 GFSTPNVMRPYVER-GTVKEFGLWDVVQQGKISVYVADALLKKGS 287 + + G + D + ++ + +++ Sbjct: 249 SVDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKE 293 >UniRef50_C0CJS9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJS9_9FIRM Length = 370 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 107/284 (37%), Gaps = 15/284 (5%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG----------VDVTYDGPTEPS- 69 S V RIA I K ++ + G + A E+ + +T++GP + Sbjct: 67 SAPVAKGSRIAVIAKSTKDEYWKAVKEGMKDAVSEINKAYGYKDEDKITMTFEGPDDEQK 126 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 V+ Q+ I+ +++ + +SA+ D L+ A + G+ V+T+DS Sbjct: 127 VTDQINTIDAVLSENPTVLCLSAIDADSCEAQLETAHENGIPVVTFDSGLNSGLPDGICT 186 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 G ++G + A ++ KVA S V + + ++ PG E++ Sbjct: 187 SG-NGKIGKIAATKLAEKLGSQ-GKVAIIAHSELGQSSVTRVTAFQKFM-RDFPGIEVLD 243 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPN 249 + S + +L SDL I + +N K +AIVG Sbjct: 244 PVYDSEGQELS-DVVQQLLDTNSDLAGIFCTNGAVSDVVLDCVQNSKRQDIAIVGVDGTT 302 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 + V+ G F + + G ++ A + G ++ +K Sbjct: 303 AQQEAVKSGREVGFVAQNPYEIGYQTILEAIKAAEPGDLEDSEK 346 >UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH93_9FIRM Length = 362 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 107/282 (37%), Gaps = 14/282 (4%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSG-QVQ 75 A + V IA I K F NG +A +++G + P + QV+ Sbjct: 48 AATTDVKVNGDYTIAMIVKNNTNPFMNGVLNGFSKAAEDIGFEAMLLSPQTADSNEDQVR 107 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS-YYINQGTPA 134 L+ + + G +AI + V +G+ PAL++A G+ VL + + +Y + Sbjct: 108 LVEDMIQSGVDAICIHPVDSNGIVPALEKAWDAGIPVLVQGTQANTDKIYGWYGTKYADE 167 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 ++ + A +++ K V + + + A + +++P ++ Q G Sbjct: 168 --ATLIAEYLAEKLDY-KGNVVYITGPQQAQNAIDEIN-ATHAVFEKYPDLNLIEEQPGN 223 Query: 195 NDATKSLQTAEGILKAYS--DLDAIIAPDANALPAAAQAAENLK------NDKVAIVGFS 246 + S+ E +++ YS D+D +I + A A EN + + + G Sbjct: 224 FNRATSMSVMENLIQKYSEDDIDWVIGGNDECAMGAIAAMENAGWKLGFEDGGIGVSGID 283 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 ++ GT+ D V G I L G + Sbjct: 284 CNKDASYAMQEGTLTVSVNPDPVSLGYIGAAFLVNYLNDGDL 325 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 105/285 (36%), Gaps = 10/285 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGYNA 87 +IA + + ++ + +GA GK+ GV V G +E +G+ I+ QGYN Sbjct: 21 KIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGYNC 80 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-----RSYYINQGTPAQLGGMLVD 142 V V+ + L QR + +L D+ SY G+ G Sbjct: 81 FGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQAG 140 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 ++ K +VA + K K+A + +IV TQ D K Sbjct: 141 EGLLKLMGGKGEVAILQGIAGEQNGINRQKGFTEKVAGK---LDIVATQPADYDQAKGQT 197 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVK 261 E ILKA+ + I A + AAQA N KV+I+ + V+ GT+ Sbjct: 198 VTEAILKAHPKITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAVKAGTLS 257 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 +G+++V L+ K + + I + V Sbjct: 258 GTISQYPYAEGQLAVQACIDLVAKKKVPSRIVAPIALIDSTNVDK 302 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 114/309 (36%), Gaps = 9/309 (2%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 L F + + L +A + + E IA K +F + GA+ A K +G V Sbjct: 3 KLKLFGVVLPAALLATSAFAAD----ETIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVV 58 Query: 62 YDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + PT+P + Q+ I + + + +AI+ V + P +++ + V+ +D Sbjct: 59 HYIPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNV-TDRS 117 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + LG +++ K V V+ + K Sbjct: 118 AGGKFLAFVGADDYSLGLETGRYLLKEM-GGKGNVVILEGVKGSLTNVDRVRGFNDAL-K 175 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 E +++ +Q + LQ E +++++ +D ++A + A +A + K Sbjct: 176 EFKDVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANR-KA 234 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 +VG + ++ G + G ++ QG I VA L+K ++ L V Sbjct: 235 KVVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETIVNEVVLKPTVVN 294 Query: 301 QVEVSPNSV 309 P V Sbjct: 295 ASNYKPYDV 303 >UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6U6C1_SINMW Length = 319 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 119/318 (37%), Gaps = 2/318 (0%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 MT + LL+A I+A + + ++ + GF + GA+ A KELGV V Sbjct: 1 MTKAIARLSILLAATAISATAASASDDISVSLVLGQRNSGFHEAIACGARAAAKELGVKV 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 S S Q+ ++N + +AI++ S L L A G +++ D+ Sbjct: 61 NIQAAPTYSASEQIPVLNAVMATSPSAIVLDPTSSTALIAPLMEAAANGAKIVAVDTTLD 120 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + +G A+ ++ KVA S P ++ + +K + +I K Sbjct: 121 DPSVLSAVVGTDNESVGRETAKALAKALDGKSGKVAQINSIPGISTVDARIKGFEEEI-K 179 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK- 239 ++P + QF D K+ Q ++ A DL +++ N A + + + Sbjct: 180 KYPNLTYIGNQFASEDIPKAQQAYVSLMSANPDLIGVVSQSNNPAIGVAGGIRSTETAES 239 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + + G + + + G + A A +K ++T Sbjct: 240 VVAIAVDADEAEIEALNEGLLDALVIQQPYEMGYVGFKQAVAAVKGEPVETPIGTGTVTA 299 Query: 300 GQVEVSPNSVQGYDYEAD 317 + ++ V Y YE + Sbjct: 300 TKANIADPDVAKYLYEGN 317 >UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Bacteria RepID=A6C6N8_9PLAN Length = 375 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 21/292 (7%) Query: 12 LSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVS 71 +S + +A++ + F+ GA+QAG++LGV+V P + V+ Sbjct: 20 ISLIPAGCNKQGASQKNDVAYVTNGIAS-FWVIAEKGAEQAGEDLGVNVEVRMPPQG-VT 77 Query: 72 GQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQG 131 Q +++ + QG + I +S + P LK + ++T DSD R YI G Sbjct: 78 DQKRMVQELLAQGIDGIAISPIDPANQNDLLKEIADNSI-LITQDSDAPDSPRECYI--G 134 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK----------- 180 G + ++ + ++ F + + ++ Sbjct: 135 MDNYEAGRMCGELVKEALPEGGEIMLFVGRLGQANARLRRQGVIDEVMDRSNDNTRYDEP 194 Query: 181 ----EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 ++ + I+ T+ D + A+ + Y +L ++ A P +A + Sbjct: 195 GKVIKNEKYTILDTRTDDFDFPQGKANAQDAIAKYPNLKCMVGLFAYNPPLCLEAVRDAG 254 Query: 237 N-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 D++ IV F + GTV + + Q G SV V +AL Sbjct: 255 KLDEIKIVSFDEEAASLQGIIDGTVVGTVVQNPYQYGYESVRVLNALANGDK 306 >UniRef50_C7LYX4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYX4_ACIFD Length = 349 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 106/272 (38%), Gaps = 14/272 (5%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQGYNAI 88 I F+ FF S GA K LGV + + G P + S + Q+ ++ + NAI Sbjct: 51 IGFVVGAEADPFFQSMYVGAAAEAKALGVKLVWQGDPVDYSPATQIPILQQVLALHPNAI 110 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 +V+ P L ++ A++ G++VL DS + + G Q G A + Sbjct: 111 VVAPTDPKALNTYMQEAVKEGIKVLNVDSGSSDQSMITSWVTGDNYQGGETAAQALASAM 170 Query: 149 NKDK-------AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 + K VA SS T T Q V KA+I +P +++ ++ + + Sbjct: 171 DYAKNCTASNPCTVAVGVSSLTTTTDAQRVAGFKAEIKAHYPNIQVLNDVVSESEPSVAQ 230 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND--KVAIVGFSTPNVMRPYVE--- 256 + A+ LD I A D A+ A + + V IVG+ +E Sbjct: 231 SGFAQDISAH-HLDGIFAVDGTDAEGASAAVKAAGAEGANVKIVGYDAYATNIQSMEAGG 289 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 +G++ +GK+ + A L + Sbjct: 290 QGSLSAIISQQPTLEGKLIIEYAVDALHHKPV 321 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 100/280 (35%), Gaps = 7/280 (2%) Query: 12 LSALGIAAISMNVQAAERI--AFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS 69 +A G ++I + FF K+ G+ V Sbjct: 23 ATACGRGGNGAKTADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIV-SDARGD 81 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN 129 + QV I +F+++ +AII +K A + + V+T D + E +I Sbjct: 82 AATQVNQIQDFISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGKSFI- 140 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 + + + + + K ++A T Q K + K PG ++V+ Sbjct: 141 -ASDSVAAARTLGNYVVKESGGKGQLAILQGQIGTTPQVDRQKGFGQAL-KNAPGIKVVS 198 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTP 248 Q K+ ++ +L+A+ +D + AAQA + K IVGF Sbjct: 199 QQPADWAQDKAYSVSQDMLQAHPGIDILWGQADAMALGAAQAVKASGSKKKHLIVGFDGD 258 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 V RGTV + + G++SV A ++K + Sbjct: 259 IAGLKAVRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKV 298 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 9/268 (3%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ 83 + +I + + ++ S G + +E G++V + S QV + +NQ Sbjct: 36 AKDPLKIGYSVYDLQNPYWQSYAAGVRAGAEEAGIEV-VIADQKSSQQEQVSGSLDLINQ 94 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 G +A+I++ V P L + A + V+ D T+ + Y ++ + G + + Sbjct: 95 GISALIITPVQPSALPSTIDAAHGEKIPVVVADIGTEGDYDGYILS--NNYEGGRLAAEH 152 Query: 144 AARQVNKDKA--KVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 ++ +V + V ++ +E +EIV++ G + Sbjct: 153 VVEKLGGTPGPHQVGVIELHAGSVVGEERVSGFVDRLGEEE-NFEIVSSLDGNDTVDGGF 211 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK---NDKVAIVGFSTPNVMRPYVERG 258 A+ +L A +LD I A + ++ A++A E + ++GF + +E+G Sbjct: 212 TAAQDMLSANPELDVIYAANDDSAVGASRAMETAGVSVANGFTLIGFDGSDPALDLIEQG 271 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKG 286 + D QG+ +V A ALL Sbjct: 272 VMSGTVAQDPFGQGQKAVETALALLNGE 299 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 112/289 (38%), Gaps = 7/289 (2%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINN 79 S + + F N A++ ELGV++ YDG + Q+ + Sbjct: 47 SKPADKKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIYDG--NYDPNTQINQVET 104 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 ++ G +AII++ A+ +A + V+ ++ E + Y+ G+ G Sbjct: 105 MISDGVDAIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLTSYV--GSKDVYAGE 162 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 L A K + + Q + + + K++P +++ + ++ Sbjct: 163 LEMQAIADKIGGKGNIVILDGPLGQSAQLERSEG-IQNVLKKYPDIKVLAEKTANWSRSE 221 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 ++ E L+A+ +DA++A + A +A E K D + +G VE+GT Sbjct: 222 AMTVMENWLQAFDKIDAVVAENDEMALGARKAIEAKKLD-IPTIGVDGITDALDAVEKGT 280 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + D QG ++ +A A K ++ +D + V + V+ Sbjct: 281 LIATIFQDGAGQGSKALEIAVAKAKGENVDKEYWIDFEPVTKDNVAEFK 329 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 5/254 (1%) Query: 40 GFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLC 99 F T G ++ +ELG D+ + Q+ I N + Q + IIV+AV D + Sbjct: 56 EFVTLMTEGMEKKAEELGCDLVMLDAQQ-DAQNQITQIENLIAQKVDVIIVAAVDSDAIL 114 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFY 159 PA++ G+ ++ + E +Y+ G + + A ++ + V Sbjct: 115 PAIEMCDDAGIPLVGVNMLFNTEEPYHYVGP-DDVLAGELEMQNAIDEIGGE-GNVVILE 172 Query: 160 SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYS-DLDAII 218 + Q Q ++ + + K ++ Q ++L E L+ +S +DAI+ Sbjct: 173 GPIGQSAQIQRLEGNQNILDKYEGKINVLADQTANWSREEALTLVENWLETFSGKIDAIV 232 Query: 219 APDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVY 277 A + A QA E DK+ + G V+ GT+ D +G +V Sbjct: 233 AHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDGTLLGTVYQDAGLEGSEAVQ 292 Query: 278 VADALLKKGSMKTG 291 A +L+ + Sbjct: 293 KAYDVLEGKVTEKE 306 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 95/281 (33%), Gaps = 2/281 (0%) Query: 13 SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPTEPSVS 71 LG+ A + ++ I K +F AQ + G + G + Sbjct: 21 LVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAFDGDNE 80 Query: 72 GQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQG 131 GQV I N V QG I+++ S G+ A+K+A GV V+ D+ T PE Sbjct: 81 GQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDAVDATFAT 140 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 G + +V +P T EIV + Sbjct: 141 DNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSPEIVGQE 200 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNV 250 D TK+ E +L+ ++A+ + A A QA + + D+V I Sbjct: 201 NTNGDQTKAQTAMENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRADQVTIGSIDGSCT 260 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 V+ G + + + ++ V + G+ +G Sbjct: 261 GVADVKAGKIGATVMQFPAKMAELGVQAVVKFAEDGTKPSG 301 >UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STD2_9RHIZ Length = 329 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 100/294 (34%), Gaps = 10/294 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M + ++ IA +S + + A ++A I K + FF + G ++ K GV+V Sbjct: 1 MRIFNGLALSAGLLATIAPVSAHAEDAAKVAAIVKGLDNPFFQTMQKGIEEQAKASGVNV 60 Query: 61 TYDGPTE-PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + +GQ + Q ++ +V+ +S L AL Q+ ++ DS Sbjct: 61 SVQAAANMGDATGQADRLTAMAMQDFDCYLVNPISVSNLVQALVPVAQKKKPIVNIDSTI 120 Query: 120 KPECR-----SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 E + GT G L ++ +KVA N +K Sbjct: 121 DAEQAKAAGFAVSTYIGTDNVAAGALAGEEMLKLVPKGSKVALIAGIVGDVGSNARIKGF 180 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 K + + E+V D K+L A IL A+ DL A + +A + Sbjct: 181 KQAVEGK---LEVVVMVSADWDREKALTAATDILAAHPDLAGFFAANDIMALGVERAVQT 237 Query: 235 LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 D V ++G + G + G + + K + Sbjct: 238 SGKD-VKVIGLDGIVDALKSIAAGELSATVAQYPYVVGAMGLEACAVAAKGKEL 290 >UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A2C8_ENTGA Length = 352 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 109/326 (33%), Gaps = 14/326 (4%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 + L S + + + + + FIP + ++ GA+ A KELG + Sbjct: 14 MTMVLLASGCSNGSSAASSDNDKTLYFIPIVDTGAYWNPMKKGAEDAAKELGYTLVTKTS 73 Query: 66 TEPSV---SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT-KP 121 + I + I ++ + +K AM + + V+T+D+D P Sbjct: 74 PSAEPSKKEKHIGFIKEATAKNVAGIAIAPIEKKAFVDPIKAAMDKDIPVITFDADLENP 133 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKD---KAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + R+ Y+ G L AA ++ + +A K K Sbjct: 134 DDRTAYVGT-DNVSAGKELGKRAAEEMKEKGITGGSIAIVCVDVAQPTMIDREKGLKEGF 192 Query: 179 AKEH----PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANAL-PAAAQAAE 233 + + ++ + T + ++S + EG + A DL + + + A E Sbjct: 193 EEVYGTDAKNFKFLATIQDNDQPSESKKQLEGYISANKDLVTVFSLGSEGPDVGVMSAIE 252 Query: 234 -NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 K+ K+ GF + +E G + D Q G + + + Sbjct: 253 SQGKSGKILHYGFDYTDTWLKGIEDGRITAIVDQDAYQIGYQVIENLVKAIDGEKIDATI 312 Query: 293 KLDIKGVGQVEVSPNSVQGYDYEADG 318 +D+K V E+ + + D Sbjct: 313 PIDVKYVPAAELKSYGEEKGKIKTDS 338 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 80/237 (33%), Gaps = 5/237 (2%) Query: 36 LVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSP 95 F ++ + K LGV + V+ Q I + + QG +IV+ + Sbjct: 91 STSNPFRSTETDSITNQAKSLGVKLIQRN-ANADVNAQNSQIEDMIAQGAKVLIVAPENS 149 Query: 96 DGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG-GMLVDMAARQVNKDKAK 154 DGL PAL A + + VLT D S +I G + +AK Sbjct: 150 DGLGPALAEAKAKKIPVLTIDRTVTGTACSDFIAFIGSNFYGQAQIAADDLATATGSQAK 209 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 VA +P + ++ ++P +V +Q G D T +L+A + Sbjct: 210 VAILSGTPGNNVTTDRTNGFQDQVKAKYPNMTVVASQTGKFDQTDGQSVMAQMLQANPGI 269 Query: 215 DAIIAPDANALPAAAQAAENLKN---DKVAIVGFSTPNVMRPYVERGTVKEFGLWDV 268 A+ A + A QA + IV V GT+ + Sbjct: 270 TAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGTIYADVETNP 326 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 14/293 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDV 60 L R + + + L +A A R+ + Q+ +++ GV + Sbjct: 10 LSRTRAVLFATVLCLAG--STALADLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTL 66 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + V Q+ + +F+ Q +AIIV+ +RA + G+ ++ +S + Sbjct: 67 QVEDSG-SDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNS--R 123 Query: 121 PECRSY---YINQGTPAQ-LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 PE R + + GT + LG M ++ A ++ K +A D + K Sbjct: 124 PEVREFPAGVVFVGTDERRLGQMQMEYLAEKM-GGKGDLAILLGRLAHDDTRKRTAGVKD 182 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 +A+ +P +V Q G K L L + + DA++A + AA A Sbjct: 183 VLAR-YPQIRVVEEQSGDWQRDKGLDLTNNWLSSGREFDAVVANNDEMGIGAAMALRQAG 241 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 +V++ G + RG + L D V G+ +V VA L++K ++ Sbjct: 242 RREVSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRKDVVQ 294 >UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-binding protein n=3 Tax=Bacteria RepID=C3RLD7_9MOLU Length = 321 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 113/288 (39%), Gaps = 5/288 (1%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 +R + FF N ++A + G + P V Q + I + ++Q Sbjct: 39 GQQRFGATYMTMNNPFFEVINNEIKKAVEANGDVLITLDPI-LDVDKQNEQILDLIDQRV 97 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 +AI V+ + + LK A + + V+ D+ E + + G+L Sbjct: 98 DAIFVNPIDAKKIEIGLKAAKKAKIPVIVVDAPIYDES-LVNCSIASNNYDAGVLCAKDM 156 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 +D AK+ T + ++ IA ++++ ++ T + Sbjct: 157 -MSKRDHAKIILLEH-ATAKSAVERIQGFLDTIASN-ANYQVINRADCDGQIEIAMPTMK 213 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 +LK D+D ++A + + A A E+++ D V + G ++ + G ++ Sbjct: 214 QMLKETPDVDVVMALNDRSALGALAAIESMEIDNVLVYGVDGSPDVKELINTGLIQATAA 273 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 V+ G+++ A ALL+ ++ ++ ++ + + +S + G+ Sbjct: 274 QSPVKMGQLAYQKAKALLENKKIEKKIEVPVELISRDNISNFELTGWQ 321 >UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT Length = 324 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 108/322 (33%), Gaps = 10/322 (3%) Query: 3 LHRFKKIALLSALGIAAISM-NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + R K L A +++ A + K + F+ + G G + +E GV Sbjct: 1 MSRLKTTLKLGAAFATLLAVTPAMADGEYGVLMKTLANPFWGAMGQGVEAGAQEAGVAYY 60 Query: 62 YDGPTEPSVSG-QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + Q+ + N + + A+I +A++ L P LK A G++V+ D + Sbjct: 61 MQAVESDQAAEPQLNVCNTMLERNPVAMITAAINSTNLLPCLKSAQDAGIKVVDLDGNLD 120 Query: 121 -----PECRSYYINQGTPAQLGGML-VDMAARQVNKD-KAKVAFFYSSPTVTDQNQWVKE 173 E G+ L G + Q+ D V + Sbjct: 121 QAILDAEGIEITFRIGSDNVLAGAQGAEYVVSQLGADATGPVLVIEGLSGNITGQKRASG 180 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA- 232 K+A+ PG EIV + G D K+ IL L AI A + A ++ Sbjct: 181 FADKLAELAPGLEIVASLPGDWDRGKAANITNDILTRNPGLVAIFAANDGMALGAVESVF 240 Query: 233 ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 K +V IVG + + G + GK +V ++ G + Sbjct: 241 AAGKGGEVIIVGVDGNSDAVKSINEGRLTASVAQLPYLVGKQAVENVKIAVEGGEVAKEI 300 Query: 293 KLDIKGVGQVEVSPNSVQGYDY 314 + + + + + ++ Sbjct: 301 IVPTLVLTKDVMDAGTEPLLEF 322 >UniRef50_B9TLD6 D-allose-binding periplasmic protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TLD6_RICCO Length = 261 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 11/255 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-----G 57 + L A G + + FIPK++ ++ G++ A EL Sbjct: 12 MFSLAASTLAVAEGQQDLIKPINKELTFVFIPKVI-HPWYDVVAAGSKFAADELSKSGIK 70 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 V+V +D P + V+ Q Q I + + + + V+ + L A++ GV V+T++S Sbjct: 71 VNVIWDQPPQADVADQNQRIEANIGRKPDGLAVACLDQATNVQLLGEAVKAGVNVVTFNS 130 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + +I + Q G L D A++++ K K+ S T +D Q ++ K Sbjct: 131 FCDDKFP--FIGPKSSFQDGFDLGDYLAKKLD-GKGKIGILAGSLTASDHVQRIQGFKKA 187 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 + + HP +IV Q + +++ E L+A+ D+ AI DA+ AA+A +N Sbjct: 188 L-ENHPDMKIVFEQPDNDILEQAVTLTENALQAHPDMAAIFGADASNPIGAARAVKNAGM 246 Query: 237 NDKVAIVGFSTPNVM 251 K+ IVG Sbjct: 247 AGKITIVGMDDLPEA 261 >UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XZZ5_KLEP3 Length = 311 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 110/296 (37%), Gaps = 3/296 (1%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 + + I + + ++ S GA + + LG T E V Q +LI+ Sbjct: 19 AAHAAEKGTIMIMVNSLDNPYYASEAKGASEKAQALGYKTTVLSHGE-DVKKQNELIDTA 77 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + + II+ A+++A + G+ V+ + + + + Q G + Sbjct: 78 IGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVDDVALEQITHNNFQAGSEV 137 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 ++ ++ +K K A + + K ++ ++P V Q Sbjct: 138 ANVFVEKMA-EKGKYAELTCNLADNNCVTRSKSF-HQVIDQYPDMVSVAKQDAKGTLIDG 195 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTV 260 + + IL+A+ D+ +I + A A + V +VG N R V+ GT+ Sbjct: 196 KRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRSDVIVVGIDGSNDERDAVKAGTL 255 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 + + V D L+KG ++ +G+ + + + VQ ++ ++ Sbjct: 256 QATVMLQAQAIAAQGVTDLDNYLQKGEKPAKQRVMFRGILITQDNADKVQDFNIKS 311 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 117/318 (36%), Gaps = 15/318 (4%) Query: 3 LHRFKKIALLSALGIAAI---SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--G 57 H + AL + L + A+ ++ Q +I F + + + G ++ E Sbjct: 5 RHFLRTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYPD 64 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 VD+ S QV + + + QG +++S ++ L P +K AM G++V+T D Sbjct: 65 VDLIVTD-GNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDR 123 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 ++ G G+ + K + + + K Sbjct: 124 KVNTP---VTVHVGGENLPLGVGAGEFLAKKLNGKGNIIELQGTAGASATIDRNKGFAEA 180 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY--SDLDAIIAPDANALPAAAQAAENL 235 IAK HP ++V +Q K+++ E +++ + + A+ A + A Q E Sbjct: 181 IAK-HPDMKVVASQNCDYTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEAA 239 Query: 236 KN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 ++VA+VG V++G + ++ V + A + K + L Sbjct: 240 GRLNEVAVVGIDGQETAFEAVKQGKLAATFVYPFVAP--EGIETAYKVAKGEEVPETITL 297 Query: 295 DIKGVGQVEVSPNSVQGY 312 V ++ +G+ Sbjct: 298 PTVSVTPDNIADMIGKGF 315 >UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH1_9FIRM Length = 356 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 105/296 (35%), Gaps = 10/296 (3%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPTEPSVSGQVQLINNFVNQG 84 + ++ A I K F+ G + GV V Y +E + GQ+ ++ + + QG Sbjct: 63 SDKKYAVILKTQATDFWVKMWKGVEAETAVKGVKVDLYSAQSEDDLEGQLTILESCIQQG 122 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD-----SDTKPECRSYYINQGTPAQLGGM 139 Y+ I ++ +S + P + A +G+ ++ D ++ + + T G Sbjct: 123 YDGIAIAPLSGVNVLPGIGEATAKGITIVDVDEKFDETELANQGGACVAFVATDNVAVGA 182 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + AKVA + AK +I+++Q D K Sbjct: 183 KGAQYIVDTAGEGAKVAIIEGKSGNQSSEDRTQGAKQAFTDG--KMDIISSQAADWDRQK 240 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERG 258 ++ A +++ DL I + A QA N K ++ IVG + Sbjct: 241 AMDIASTLIQQNPDLKGIYCCNDGMALGAVQAVINANKLGEIMIVGTDGDAEAVSSIANN 300 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + D Q G S+ + ++ G + G + V V V+ + + Sbjct: 301 ELSATVAQDPAQIGATSLDLLIEAVESGKKGEVGTFPEKTPVESVLVTAENAADFQ 356 >UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C383_9CLOT Length = 336 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 7/290 (2%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 A F + +F + ++A + G + P + Q I + +G + Sbjct: 51 AYVFGFSVIDMQNPYFITLEGATREAVESGGYRMITKDPA-SDAAAQAAQIQEMIAEGID 109 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-ECRSYYINQGTPAQLGGMLVDMAA 145 A+ + V + + +LK GVR++ DS K E YI G+ G + Sbjct: 110 AVFLCPVDWEEITDSLKALKDAGVRIINVDSQVKEMEYVDAYI--GSDNHNAGFICGEDL 167 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAE 205 + D K+A PT N + + IA G+E+V + + ++L+ AE Sbjct: 168 IEKRPDGGKIAILE-CPTQNSINDRITGFEEAIADAEKGFEVVAREDTGGEFDRALEAAE 226 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFS-TPNVMRPYVERGT-VKEF 263 ILK D+ AI+ + A A K + V I G +P++ + + + G + Sbjct: 227 KILKENPDITAIMCGNDQIAVGAMTAVNLAKMEDVIIYGVDGSPDIKKEFKKAGCQIAGT 286 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + GK + ++LK + ++ + + V V G+ Sbjct: 287 AAQSPINMGKTAAKTGISILKGEEFEREVYEEVFMINKDNVDMYGVDGWQ 336 >UniRef50_C0BEZ3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEZ3_9FIRM Length = 339 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 104/278 (37%), Gaps = 7/278 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT---EPSVSG 72 G + +V +++ F+ K + F+ S GA A E +D+ +GP E Sbjct: 34 GKEGSTNSVIEKKKVVFLTKSMDSSFWQSAYAGAGAASAEYNLDLVCEGPDGDGEEDYEA 93 Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q ++I+ + + +A++ SA+ + A+ RA + G+R++ DS E YI GT Sbjct: 94 QNEMIDRAIREQVDALLFSAIDFEKNAEAIDRAAKAGIRIVVVDSPVNSEAVECYI--GT 151 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 G + + + + + K + + K+ I + Sbjct: 152 DNYEAGCMAGEEVLGNPAENLNIGIVNFDKSTENGQLREKGFRDTVLKDD-RVNITASIN 210 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPNVM 251 + T + + E +L ++ I+ + A E L + +V F + Sbjct: 211 VKSTITDAREGTERMLLDNPQINVIVTFNEWTTLGVGDAVEALGAGERTQVVAFDSNVKS 270 Query: 252 RPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 +E+G V + + G + + + LL + Sbjct: 271 IGMLEKGNVDALIVQNPYAMGYLGIEQINTLLNGQKPE 308 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 6/265 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQG 84 +I + K + ++ S G G + GV + Y P+E GQ+ + N + QG Sbjct: 54 EGTQIGGVSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQG 113 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 Y ++VS + + L PA++ A RG+ V+ + P Y N G+ V Sbjct: 114 YQGLLVSPQTDNNLQPAMETAASRGIAVVNVNDAVIPSATQYVGNVQRDN---GVRVAQW 170 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 KVA P V Q I + +++V + ++ A Sbjct: 171 FIDNRPGGGKVAAIEGQPGVFAAGQRTDGFTTTITEAG-NFQVVASVPANWSREQAYDAA 229 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEF 263 IL+ + DL A + +A + ++V++ G + G + Sbjct: 230 STILQQHPDLIGFYANNDGMALGVVEAVKAANLQEQVSVFGTDGIPDAYASIRAGDLTGT 289 Query: 264 GLWDVVQQGKISVYVADALLKKGSM 288 V G++++ V LL + Sbjct: 290 VDSFPVLTGEVAMEVVLRLLAGQGI 314 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 90/271 (33%), Gaps = 9/271 (3%) Query: 36 LVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSP 95 FF + + + G DV E V+ Q + +F+ G+ AI++ Sbjct: 59 TTTNPFFNVIADNIKSELVKEGYDVEVV-SGEFDVARQKNQVKDFIVAGHAAIVLCPCDS 117 Query: 96 DGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA-RQVNKDKAK 154 G+ PA++ A G+ V T D + T GG A V K Sbjct: 118 RGIGPAIQEATAAGIPVFTADIACLAPGAEVVSHIATDNLGGGKQAAEAMIEAVGSAGGK 177 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPG-----WEIVTTQFGYNDATKSLQTAEGILK 209 V V+ K I K + IV+ G KS + AE L+ Sbjct: 178 VVILDFKA-AESCILRVQGFKEVIDKHNSENPSSAITIVSELPGDGQKDKSYKAAEDALQ 236 Query: 210 AYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDV 268 A+ DL I A + + A A E K D+V IVGF ++ G + + Sbjct: 237 AHPDLAGIFAINDPSALGARAALEKANKADQVKIVGFDGQPDGMQAIDEGKIFADPIQHP 296 Query: 269 VQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 Q GK + + + + Sbjct: 297 DQIGKRVAASIVSYFRGEEVPKEQLIPTGLY 327 >UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7J1_ABIDE Length = 360 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 119/304 (39%), Gaps = 13/304 (4%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQL 76 + +V E+ A + K F+ G ++ +LGV V G TE V GQVQ+ Sbjct: 59 TGSTASVAGEEKYAIVLKTQSSQFWQDMKAGIEEEAAKLGVKVDVQSGNTEDDVEGQVQV 118 Query: 77 INNFVNQG-YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-----RSYYINQ 130 + NFV+ G Y AI V+ +S L A+ +G+ + D + Y Sbjct: 119 LENFVSTGEYKAIGVAPISDVNLNNAIAEGCSKGIVFIDIDEKIDAKALGELGGGLYAYV 178 Query: 131 GTPA-QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 T ++G +QV + A+VA Q AKA G ++V Sbjct: 179 ATDNKEVGETGAGELLKQVGNN-AEVAIIEGKAGALSGEQRRDGAKAAFEAA--GAKLVD 235 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPN 249 +Q D TK++ A ++ A +L AI + A +A + D + + G + Sbjct: 236 SQPADWDRTKAMDVATNMISANPNLKAIYCCNDTMAMGAVEAVKKSGKD-IKVCGTDGND 294 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPNS 308 V G + + G ++ + +K+ + G ++ G+ V ++ ++ Sbjct: 295 DAIKAVADGELAATVAQNPKLVGATALNLMVKAVKENAKPEAGAEVTQTGIAAVLITKDN 354 Query: 309 VQGY 312 + Y Sbjct: 355 AKEY 358 >UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=C6C3I7_DICDC Length = 311 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 126/312 (40%), Gaps = 5/312 (1%) Query: 7 KKIALLSALGIAAISMNVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 + LL+A +A+S+ AAE+ I + + ++ S GA + +ELG T Sbjct: 3 LRSMLLTAAITSALSLTAHAAEKGTIMILVNSLDNPYYASEAKGADKKAQELGYKTTVLS 62 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 E V Q +LI+ + + I++ A+K+A G+ V+ + + + Sbjct: 63 HGE-DVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKAAGIPVVLINREIPVDDV 121 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + Q G + ++ ++ +K K A S + K ++ ++PG Sbjct: 122 ALVQITHNNFQAGSDVANVFVEKM-GEKGKYAELTCSLADNNCVTRSKSF-HQVLDQYPG 179 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 + Q + + IL+A+ D+ +I + A A + + V +VG Sbjct: 180 MASIARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRNDVVVVG 239 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 N R V+ G++K + V D ++KG+ ++ +G+ + Sbjct: 240 IDGSNDERDAVKEGSLKATVMLQAQAIAAQGVTDLDNFIQKGAKPAKQRVMFRGILIQQD 299 Query: 305 SPNSVQGYDYEA 316 + + VQ +++++ Sbjct: 300 NASKVQDFNFKS 311 >UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional regulator n=15 Tax=Bacteria RepID=A8L4W4_FRASN Length = 363 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 100/277 (36%), Gaps = 15/277 (5%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYN 86 + I K FF +GAQQA +E V++ T G + + QV I N V G Sbjct: 58 PTVGLITKSYTNPFFVKMRDGAQQAAREQKVELLTATGRFDGDYASQVSAIENMVAAGAR 117 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 I+++ + PA+++A RGV V+ D T PE + + G ++ + A Sbjct: 118 GILITPNDSKAIVPAIEQARHRGVLVIALDVPTDPESAVDALFSTDNFKAGILIGEYARA 177 Query: 147 QVNKDKAKVAFFYSSPTVTD-----QNQWVKEAKA-------KIAKEHPGWEIVTTQFGY 194 + A++A S +T N ++ A P +V ++ Sbjct: 178 AMGDTPARIATMDVSSHITGGGLLRHNGFLVGFGALDVTVSETQQATPP--SVVCSRDSK 235 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 D K L+ D++ + A + A A A + V IV Sbjct: 236 GDQAKGRTAMADCLRTDPDINLVYAVNEPAAFGARTALDAAGKADVMIVSIDGGCTGVRA 295 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 V G + ++ + V +K G+ +G Sbjct: 296 VRDGKIAATSQQYPLKMAEQGVAAVVDYVKDGTKVSG 332 >UniRef50_A6BDJ9 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDJ9_9FIRM Length = 339 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 107/306 (34%), Gaps = 10/306 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAER--IAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + + ++ G + S +A +R + + K ++ S +G + A + +DV Sbjct: 28 ISALLLMTVILCCGCSNHSSWQKAKDRYVVGVVTKSNTSEYWMSVNSGMEAAAAKYDMDV 87 Query: 61 TYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 P +E Q + + ++Q +A+ V+ + + L ++ + + +D+ Sbjct: 88 ITLAPDSELDREVQEKQVEKLIDQNVDALAVAPIDSYHVPDYLDEIEKKKITAVCFDNGM 147 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 Y + G L A Q++ K +V + V+ + + Sbjct: 148 VGGELPYI--GIDNHKTGYQLAQELAEQLDH-KGQVGIVAGDLKQKGHRERVEGFEEYMK 204 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 E P + + GY + S Q ++ Y + I+A A + LK+ Sbjct: 205 SE-PEMTVKFVESGYANLQMSEQKVRDLMGQYPQIRGIMATSAVTAMG---LVDELKDTD 260 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 + IV VE G + + G +++ L +K L+ + + Sbjct: 261 IKIVAVDEQEDSLKAVENGQILALAAQSGYEIGYETIHYIQNLRNGKHLKKKYYLNAEIL 320 Query: 300 GQVEVS 305 Q V Sbjct: 321 TQDNVK 326 >UniRef50_Q1IJE4 ABC sugar transporter, periplasmic ligand binding protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJE4_ACIBL Length = 327 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 99/295 (33%), Gaps = 10/295 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQA---AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 + KKIAL + + E+ + V ++ + G +A + GV Sbjct: 1 MSAPKKIALTLIAAASCLLAGCAKHDNDEKYILVTVNSKVEYWKTAQAGLTKAAAQYGVK 60 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 GP +VQ N Q + I+VS + PA+ A+ G+ VLT DSD Sbjct: 61 WDVRGPENYDPQAEVQEFRNAAAQKPSGILVSVADASLMQPAIDEAINAGIPVLTIDSDA 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 R Y+I GT + G L + K V FF + + ++ + K ++ Sbjct: 121 PKSKRLYFI--GTNNRQAGTLGAKRLVEKLHGKGNVVFF--TMPQPNLDERLAGYKDVLS 176 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAY--SDLDAIIAPDANALPAAAQAAENLKN 237 PG +IV D+ + A +DA + +A + A A + Sbjct: 177 DN-PGIKIVEVVNIKGDSGNAFDRTAHYAGAKDAQKIDAFVCLEATSAKDVALALKRENV 235 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 ++ ++ G V + D + T D Sbjct: 236 TDRLVIAMDVDPATLDLIKSGVVDATIAQKPYTMAFYGLKALDEIHHGKPDLTKD 290 >UniRef50_C7GDR0 Transcriptional regulator, LacI family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDR0_9FIRM Length = 339 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 94/277 (33%), Gaps = 7/277 (2%) Query: 18 AAISMNVQAAE-RIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTYDGPTEPSVSGQ 73 A I++ Q + +I + FF +G +Q +EL G V + Q Sbjct: 50 AGIALAAQKKKLKIGVLLFGAENPFFDEVMDGLRQKLEELSIYGCTVIER-RISFDLQSQ 108 Query: 74 VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP 133 +Q I+ + + + +I+S + + + + G+ +T ++D R Y+ G+ Sbjct: 109 LQTIDELLKEEIHGLILSPYNDPAIQEKIDLLWENGIPCITINTDMPDSKRIAYV--GSD 166 Query: 134 AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFG 193 G + D A V S V + + + + +HP IV Sbjct: 167 YHKCGQTAAGLLHLFSGDYASVGIVTGSHNVLCHEERISGFTSHLHTKHPNIRIVDVVEN 226 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRP 253 +D KS + +L + DL A+ A + I+ F Sbjct: 227 GDDDYKSYEVVSDLLDRHPDLSALYFTAAGVYGGCRAVLNASLQRPLKIITFDAVLSTCE 286 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 + G + +QG S+ + L G + Sbjct: 287 MIRNGVISATICQQPDEQGARSLSLLVDYLLTGKLPE 323 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 92/281 (32%), Gaps = 7/281 (2%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP 68 I LS + + + FF GAQ ELG+D+T + Sbjct: 13 ILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANELGIDLTVLDAGD- 71 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 Q +++ V+ G +V+ + L PA+ + ++G+ +T D + I Sbjct: 72 DAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVDRTITGADVAALI 128 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 + GG + + + +V + + + +A EHP IV Sbjct: 129 --DSNNTEGGAAAASVLAKAIRAQGEVIVLRGIEGSSSSAERYEGFTQAMA-EHPRVRIV 185 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTP 248 + D + +L + D+ I A + A A V +VGF Sbjct: 186 AAEAADFDRDTARDLVTDLLADHPDVAGIFAENDEMALGAVDALGERAGKDVKVVGFDGT 245 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK 289 V+ + + G ++ A LL + + Sbjct: 246 EEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGEAAE 286 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bac... 291 2e-77 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 289 9e-77 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 286 1e-75 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 279 8e-74 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 278 3e-73 UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteob... 277 4e-73 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 272 1e-71 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 271 2e-71 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 270 4e-71 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 270 7e-71 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 266 7e-70 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 266 7e-70 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 265 1e-69 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 263 9e-69 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 262 1e-68 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 262 1e-68 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 262 2e-68 UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding... 261 2e-68 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 261 2e-68 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 260 6e-68 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 258 2e-67 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 258 2e-67 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 258 2e-67 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 257 4e-67 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 256 9e-67 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 256 1e-66 UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-b... 255 1e-66 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 254 3e-66 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 254 3e-66 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 254 4e-66 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 254 4e-66 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 253 8e-66 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 252 2e-65 UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria Rep... 251 2e-65 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 251 3e-65 UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostri... 250 6e-65 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 250 6e-65 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 250 6e-65 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 250 7e-65 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 249 1e-64 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 248 2e-64 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 248 2e-64 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 248 2e-64 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 248 3e-64 UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostri... 247 4e-64 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 246 6e-64 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 246 1e-63 UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Di... 245 1e-63 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 245 2e-63 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 245 2e-63 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 245 2e-63 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 245 2e-63 UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter... 245 2e-63 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 245 2e-63 UniRef50_B7R620 Periplasmic binding proteins and sugar binding d... 244 3e-63 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 244 3e-63 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 244 3e-63 UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional... 244 4e-63 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 243 5e-63 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 243 5e-63 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 243 5e-63 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 243 6e-63 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 243 6e-63 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 243 9e-63 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 243 9e-63 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 242 2e-62 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 242 2e-62 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 241 2e-62 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 241 3e-62 UniRef50_C8SFB0 ABC-type sugar transport system periplasmic comp... 241 3e-62 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 240 4e-62 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 239 9e-62 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 239 1e-61 UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotro... 238 2e-61 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 238 2e-61 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 238 2e-61 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 238 2e-61 UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ... 238 2e-61 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 238 2e-61 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 238 3e-61 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 238 3e-61 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 238 3e-61 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 237 3e-61 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 237 5e-61 UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostri... 237 5e-61 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 237 5e-61 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 236 6e-61 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 236 7e-61 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 236 9e-61 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 236 1e-60 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 235 2e-60 UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostri... 235 3e-60 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 234 3e-60 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 234 3e-60 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 234 3e-60 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 234 3e-60 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 234 4e-60 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 233 6e-60 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 233 7e-60 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 233 9e-60 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 233 1e-59 UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1... 232 1e-59 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 232 1e-59 UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional... 232 1e-59 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 232 1e-59 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 232 2e-59 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 232 2e-59 UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=... 231 2e-59 UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional... 231 2e-59 UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=... 231 2e-59 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 231 3e-59 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 231 3e-59 UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional... 230 4e-59 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 230 5e-59 UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional... 230 5e-59 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 230 6e-59 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 230 6e-59 UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protei... 230 7e-59 UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostri... 230 7e-59 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 230 9e-59 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 229 1e-58 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 229 1e-58 UniRef50_Q0S9A1 Possible sugar transporter, solute binding compo... 229 1e-58 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 229 2e-58 UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 228 2e-58 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 228 2e-58 UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kri... 228 2e-58 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 228 2e-58 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 228 2e-58 UniRef50_C6BZX1 Putative D-ribose-binding periplasmic protein n=... 228 2e-58 UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional... 228 3e-58 UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasm... 228 3e-58 UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 227 4e-58 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 227 5e-58 UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-bindin... 226 7e-58 UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostri... 226 7e-58 UniRef50_A1STY3 Transcriptional regulator, periplasmic binding p... 226 8e-58 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 226 8e-58 UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia... 226 1e-57 UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotro... 226 1e-57 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Br... 224 2e-57 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 224 3e-57 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 224 3e-57 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 224 3e-57 UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional... 224 4e-57 UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacte... 224 4e-57 UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacte... 224 5e-57 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 223 6e-57 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 223 6e-57 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 223 6e-57 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 223 9e-57 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 223 1e-56 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 223 1e-56 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 222 1e-56 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 222 1e-56 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 222 1e-56 UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport... 222 1e-56 UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales b... 222 2e-56 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 222 2e-56 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 222 2e-56 UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding... 221 2e-56 UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional... 221 2e-56 UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional... 221 2e-56 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 221 3e-56 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 221 3e-56 UniRef50_A3DI69 ABC-type sugar transport system periplasmic comp... 221 3e-56 UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostri... 221 4e-56 UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and tra... 221 4e-56 UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional... 220 5e-56 UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepI... 220 5e-56 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 220 6e-56 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 220 6e-56 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 220 7e-56 UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional... 220 7e-56 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 219 9e-56 UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-b... 219 1e-55 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 219 1e-55 UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostri... 219 1e-55 UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding... 219 1e-55 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 218 2e-55 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 218 2e-55 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 218 2e-55 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 218 3e-55 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 218 3e-55 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 218 4e-55 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 217 4e-55 UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria Re... 217 4e-55 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 217 5e-55 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 217 5e-55 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 217 5e-55 UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-... 217 5e-55 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 217 6e-55 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 217 6e-55 UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax... 217 6e-55 UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesor... 216 6e-55 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 216 7e-55 UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostri... 216 7e-55 UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional... 216 7e-55 UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 T... 216 7e-55 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 216 7e-55 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 216 1e-54 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 216 1e-54 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 215 1e-54 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 215 2e-54 UniRef50_Q7CTE3 ABC transporter, substrate binding protein (Ribo... 215 2e-54 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 215 2e-54 UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional... 215 2e-54 UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter... 215 2e-54 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 215 2e-54 UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional... 214 3e-54 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 214 4e-54 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 214 4e-54 UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Ta... 214 4e-54 UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein ... 214 5e-54 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 214 5e-54 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 213 5e-54 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 213 6e-54 UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostri... 213 6e-54 UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-bindin... 213 7e-54 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 213 7e-54 UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=P... 213 8e-54 UniRef50_A5FYX5 ABC-type sugar transport system periplasmic comp... 213 9e-54 UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional... 213 1e-53 UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthroba... 213 1e-53 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 213 1e-53 UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Ba... 213 1e-53 UniRef50_B5CR03 Putative uncharacterized protein n=1 Tax=Ruminoc... 212 1e-53 UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport ... 212 1e-53 UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding... 212 2e-53 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 212 2e-53 UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding... 211 2e-53 UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic com... 211 3e-53 UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 211 3e-53 UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional... 211 4e-53 UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DS... 211 4e-53 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 210 4e-53 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 210 5e-53 UniRef50_C9D206 ABC transporter, substrate binding protein n=2 T... 210 6e-53 UniRef50_B5IYU4 Putative uncharacterized protein n=2 Tax=Proteob... 210 7e-53 UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional... 210 7e-53 UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bry... 210 7e-53 UniRef50_Q2LS58 ABC-type sugar transport system, periplasmic com... 210 7e-53 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 210 7e-53 UniRef50_A9EQW5 Ribose transporter, periplasmic binding protein ... 209 8e-53 Sequences not found previously or not previously below threshold: UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 213 1e-53 >UniRef50_A1JJ52 Autoinducer 2-binding protein lsrB n=200 Tax=Bacteria RepID=LSRB_YERE8 Length = 344 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 290/344 (84%), Positives = 307/344 (89%), Gaps = 4/344 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNV----QAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 M R KK+AL+ ALG A I+ + QAAERIAFIPKLVGVGFFTSGG GA AGKEL Sbjct: 1 MKTPRLKKLALVCALGFACITFSAINAVQAAERIAFIPKLVGVGFFTSGGKGAVDAGKEL 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI+VSAVSPDGLCPALKRAMQRGV++LTWD Sbjct: 61 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWD 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SDTKPECRS YINQGTP QLG MLVDMAA QV KDKAKVAFFYSSPTVTDQNQWV EAK Sbjct: 121 SDTKPECRSVYINQGTPNQLGSMLVDMAANQVKKDKAKVAFFYSSPTVTDQNQWVNEAKK 180 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 KI +EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK Sbjct: 181 KIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 240 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 D VAIVGFSTPNVMRPYVERGTVKEFGLWDVV QGKISVYVA+ +LKKG + GDK+DI Sbjct: 241 RDNVAIVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDI 300 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 +G VEV+PNSVQGYD+EA G+GIVLLP+RVIF KENI KYDF Sbjct: 301 PNIGVVEVAPNSVQGYDHEAKGSGIVLLPQRVIFTKENIDKYDF 344 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 112/321 (34%), Gaps = 28/321 (8%) Query: 2 TLHRFKKIALLSALGIAAIS---------------------MNVQAAERIAFIPKLVGVG 40 R + LL+ I S +I + Sbjct: 3 KTRRLLSVLLLAIFMITGCSIEGQNNKEESKESGVEEKASETKTDGDMKIGVSLSTLNNP 62 Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP 100 FF S G ++A + V+ T + S Q + + + QG + I+++ V + Sbjct: 63 FFVSIREGVEEAAGKENVE-TVITDAQNDSSTQNNQVEDLITQGVDLIVINPVDSTAIAT 121 Query: 101 ALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS 160 ++++A + + V+ D + +I + GG L + + A+V Sbjct: 122 SVEKANEANIPVICVDRGSDQGELVSFI--ASNNVEGGKLAGEYILEKVGENAEVIQLEG 179 Query: 161 SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAP 220 P + + + + + ++ +Q D + + E +L+A+ D+ A+ Sbjct: 180 IPGASSTRERGEGFEEA---TNGKINLLASQTANFDRAEGMTVMENLLQAHPDVKAVFCQ 236 Query: 221 DANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 + A++A + D V IVGF VE G + + GK+++ A Sbjct: 237 NDEMALGASEAIKASGKD-VTIVGFDGNEDAIKAVEEGNLSATVAQKPKEMGKLAIETAI 295 Query: 281 ALLKKGSMKTGDKLDIKGVGQ 301 LK ++ ++ + + Sbjct: 296 KYLKGEEVEETVDSPLELIKK 316 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 118/299 (39%), Gaps = 5/299 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTE-PSVSGQVQLINN 79 + + I I + + GA+ KELG V +T+ P E + QV+++ + Sbjct: 43 ASSEKKYNIVLITMDSMDEHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMED 102 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 +NQ +AI+++ L P +++A G+ V+ DS K + ++ T Sbjct: 103 AINQKADAILIAPTDQTALTPVVEKAFDAGIPVILIDSPVKTDKYVSFV--ATDNIKAAE 160 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ K K+A + P K ++ +++P +I+TTQ+ D + Sbjct: 161 MAADKLGELLGGKGKIAIISAQPGSGTTIMRENGFKDRLKEKYPDIQIITTQYSMGDKNR 220 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERG 258 +L A IL A+ DL + + A A + KV +VGF ++ Sbjct: 221 ALNQALDILTAHPDLAGFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATINAIKEN 280 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 ++ + + G V +A L+ + + + + V + Y ++ Sbjct: 281 YIQASMVQNPYMMGYKGVEIAVDKLQGKEVPKRVDTGVTVMTKDNVDEVVKEYYKGQSK 339 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 117/318 (36%), Gaps = 21/318 (6%) Query: 1 MTL-HRFKKIALLSALGIAAISMNVQ----------------AAERIAFIPKLVGVGFFT 43 M + +++A +A +V ++ F + FF Sbjct: 1 MKRWTAMLAVGVVAAGVLAGCGTSVSTGSQKTNLSNTGTASTKPIKLGFAVSTLNNPFFV 60 Query: 44 SGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALK 103 + NG Q+ K+LGV VT + Q+ + + + Q NAII++ L A++ Sbjct: 61 AMSNGVQEEAKKLGVQVTILN-GNNDPATQLNQVEDLIQQHVNAIILNPTDSQSLSTAVE 119 Query: 104 RAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPT 163 +A + + V+T D + +I + + G + + K +V Sbjct: 120 QANRAHIPVITLDRSVTKGNVACFI--ASNSVEAGKMAADELIKALGGKGQVVELQGVIG 177 Query: 164 VTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDAN 223 + + K +I K PG +V Q D +++L + IL+A+ ++ + A + Sbjct: 178 TSAEADREKGFDEEIGKA-PGIRVVARQTANFDRSQALNVMQNILQAHPNIQGVFAQNDE 236 Query: 224 ALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 A +A + + IVG V +G + VQ+G + V A L+ Sbjct: 237 MALGALKAIQEAGKHNIKIVGIDGEKEAVNDVHKGLLYADIAQQPVQEGILGVEYAVKLV 296 Query: 284 KKGSMKTGDKLDIKGVGQ 301 + + + V + Sbjct: 297 EGEKVPKQVNSPLHLVEK 314 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 15/323 (4%) Query: 1 MTLHRFKKIALLSALGI----------AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQ 50 M + + L A S N +I + K F+ S GA+ Sbjct: 1 MKKLLLFLVVFAAVLSCGKSEDKKDAGAGKSANSGDKIKIELVSKGYQHEFWRSVEAGAK 60 Query: 51 QAGKELGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRG 109 +AG+ELGV+V + GP E + QV ++ N +N+ +A+ ++A+ PD L K+AM Sbjct: 61 KAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALAVVAKKAMDAK 120 Query: 110 VRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQ 169 + V+T+DS+ K + S +I T ++ G + ++ K KVA +P T + Sbjct: 121 IPVVTFDSNVKGDITSSFI--ATDNKVAGAMAGEQLAKLINGKGKVAIVSHNPGTTTAIE 178 Query: 170 WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAA 229 + +AK +P +I+ TQF D +K+L I+ A D+ I + ++ A Sbjct: 179 REAGFREALAK-YPDIKILNTQFSDGDKSKALAITLDIINANPDIAGIYGTNEPSIFGIA 237 Query: 230 QAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 + E KV +VG + + ++E+G + + D G +V L K + Sbjct: 238 KGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMGYQTVQQLYKLSKGEKV 297 Query: 289 KTGDKLDIKGVGQVEVSPNSVQG 311 + V + ++ + Sbjct: 298 EKRIDTGAILVTKENINNPDITK 320 >UniRef50_C9R4N9 Autoinducer-2 (AI-2) kinase n=3 Tax=Gammaproteobacteria RepID=C9R4N9_AGGAD Length = 365 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 259/332 (78%), Positives = 288/332 (86%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP 68 + LS L ++ Q+A+RIAFIPKLVGVGFFTSGG GA + GK L VDVTYDGPTEP Sbjct: 34 VTALSVLLGLSVVATAQSADRIAFIPKLVGVGFFTSGGQGATEMGKTLSVDVTYDGPTEP 93 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 SV QVQLINNFVNQGYNAI+VSAVSPDGLC L+RAM+RGV+VLTWDSDTKPECRS+YI Sbjct: 94 SVPNQVQLINNFVNQGYNAIVVSAVSPDGLCSTLQRAMKRGVKVLTWDSDTKPECRSHYI 153 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 NQGTP QLG MLVDMAA Q++K KAKVAFFYSSPTVTDQNQWVKEAKAKIAK+HP WEIV Sbjct: 154 NQGTPEQLGSMLVDMAANQISKPKAKVAFFYSSPTVTDQNQWVKEAKAKIAKDHPEWEIV 213 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTP 248 TQFGYNDA KSLQTAE ILKAY DLDAIIAPDANALPAAAQAAENLK + V IVGFSTP Sbjct: 214 ITQFGYNDAIKSLQTAESILKAYPDLDAIIAPDANALPAAAQAAENLKVNSVVIVGFSTP 273 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 NVMRPYV+RG VK+FGLWDVVQQGKISV A+ALLK + GDKL+++G+G +EVSPN Sbjct: 274 NVMRPYVKRGKVKQFGLWDVVQQGKISVAAANALLKGEKLNVGDKLNVQGIGTIEVSPNK 333 Query: 309 VQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 VQGY+YEADGNGI+LLPERV+F K+NI Y+F Sbjct: 334 VQGYEYEADGNGIILLPERVVFTKDNIDNYNF 365 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 121/322 (37%), Gaps = 16/322 (4%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER-----------IAFIPKLVGVGFFTSGGNGA 49 M R I L + +A++ +A + K + ++ + GA Sbjct: 1 MKGKRLLGIILTLGMLSCVFGGCGNSADQGKGGEKGKGGNVAVVLKALNSDYWKTVQAGA 60 Query: 50 QQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 A KELGV V GP E V GQ LI + + +G +A++V+ + P+ +A + Sbjct: 61 NDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALVVAPLQPNAAITTFDKAEKE 120 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 + V+ D+D + + ++ GT G L + K + P Q+ Sbjct: 121 KIPVVLIDTDANWDKKKSFV--GTGNIAAGKLGGEYISKKLKKGDEAIIIRGVPGDRTQD 178 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 + + A+ + G ++V Q ++ K++ E +L+ + ++ + + A Sbjct: 179 ERTQGAQKALEAA--GIKVVEIQPANSEREKAISVMENLLQTHPNIKGVFCTNDEMALGA 236 Query: 229 AQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 +A + + +G ++ G + + GK V A +L+ + Sbjct: 237 VKALQQAGKKNIISIGVDGSPDALKSIKEGGLTGTVAQNSYDIGKKGVETAVKVLRGEKV 296 Query: 289 KTGDKLDIKGVGQVEVSPNSVQ 310 +T V + V+ + Sbjct: 297 ETRIDTGTTLVDKQNVNEQEAK 318 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 13/321 (4%) Query: 3 LHRFKKIALLSALGIAAISMNV-------QAAERIAFIPKLVGVGFFTSGGNGAQQAGKE 55 F +++ + L A + A IPK F+ S +GA+QAG+E Sbjct: 110 RRSFCLVSVATLLVCAGCQPPADTSANTGEKELHFAVIPKGTTHIFWQSVKHGAEQAGEE 169 Query: 56 LGVDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 +G +T+ GP+ E Q+ ++ F+N + I+++ + D L +K A + GV V+ Sbjct: 170 IGAKITFRGPSKENDRDEQINVVQGFLNARVDGILLAPLDADALVRPVKEASRAGVPVVI 229 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK-AKVAFFYSSPTVTDQNQWVKE 173 +DS + + T GG L A +K V +Q + Sbjct: 230 FDSGLNTDPGDFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLRYEQGSESTHQREEG 289 Query: 174 AKAKIAKEHPGWEIV-TTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQA 231 IA+ + ++ + Q+ ++ A+ +L + D D I A +A Sbjct: 290 FLYSIAE-YSNIRVLSSDQYAGTTTESAIDKAQALLNRFGDEADGICTVCEPTAEGALRA 348 Query: 232 AENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 K KV +V F + + +R + G V L D V G +V A L+ + + Sbjct: 349 LRERKLAGKVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQAVKTMAAHLRGETPEQ 408 Query: 291 GDKLDIKGVGQVEVSPNSVQG 311 + ++ Sbjct: 409 FIDTGVFVATAKNQDDENIAR 429 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 106/311 (34%), Gaps = 16/311 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAE---------RIAFIPKLVGVGFFTSGGNGAQQ 51 M AL A + A+ +I + FF S NG + Sbjct: 1 MKKTLTVFTALALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVVK 60 Query: 52 AGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 K+ G++V + + Q + + + QG +A++++ + A++ A G+ Sbjct: 61 EAKKQGIEVIVVD-AQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLGIP 119 Query: 112 VLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWV 171 V+T D + + + GG + + AKVA P + + Sbjct: 120 VVTLDRSAENGKVETLV--ASDNVKGGQMAADFIVEQLGKGAKVAELEGVPGASATRERG 177 Query: 172 KEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA 231 + ++ Q D TK L E +L+ D+ A+ A + A +A Sbjct: 178 SGFHKTADDK---LNVIAKQTADFDRTKGLNVMENLLQGNPDIQAVFAHNDEMALGAIEA 234 Query: 232 AENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 + ++ +VGF V+ G + GK++V A +L ++ Sbjct: 235 IRSSGK-EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVEKT 293 Query: 292 DKLDIKGVGQV 302 +K + Sbjct: 294 IPAPLKLETKK 304 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 107/312 (34%), Gaps = 18/312 (5%) Query: 2 TLHRFKKIALLSALGIAAIS-----------MNVQAAERIAFIPKLVGVGFFTSGGNGAQ 50 I LS + A S + I + FF S G + Sbjct: 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIE 60 Query: 51 QAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGV 110 + K+ G+ V + S Q + + + QG +A++++ + A++ A GV Sbjct: 61 KEAKKRGMKVIIVD-AQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGV 119 Query: 111 RVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQW 170 V+T D + + + GG + AKVA P + + Sbjct: 120 PVVTIDRSAEQGKVETLV--ASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRER 177 Query: 171 VKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ 230 IA + ++VT Q D TK L E +L+ + D+ A+ A + A + Sbjct: 178 GSGFHN-IADQ--KLQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEMALGALE 234 Query: 231 AAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 A + D + ++GF ++ + GK++ AD +L ++ Sbjct: 235 AINSSGKD-ILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKKVQK 293 Query: 291 GDKLDIKGVGQV 302 +K Q Sbjct: 294 TISAPLKLETQK 305 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 266 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 26/333 (7%) Query: 7 KKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 K + LS + I +S+ I I K V +++ G + AGK LGVD + P Sbjct: 3 KLLVFLSVVLITGLSLA----LTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKFFVPQ 57 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + ++ Q+Q++ +F+ +G + I ++ P + P +K+A++ G+ V+T D+D+ R Sbjct: 58 KEDINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTDSPDSGR-- 115 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 Y+ GT G + +++ K KV S T + Q ++ K IA E Sbjct: 116 YVYIGTDNYQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIAD--SEIE 173 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGF 245 IV D +++ AE L A+ DLDA A P+ A +N KV IV F Sbjct: 174 IVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGKVGKVKIVCF 233 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 T + YV+ G ++ G +SV V + K G + + + +V V Sbjct: 234 DTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLYLM-----NKIGVQNTLMMLPKVTVD 288 Query: 306 PNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 D D + EN+ +Y Sbjct: 289 GKVDYVIDTGVD-----------VVTPENLDEY 310 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 9/301 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M + +AL + +S+ QA + +A + + FF + +GA+ KELG ++ Sbjct: 1 MKK---LATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNL 57 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 ++ S ++ + + +G AI+++ D + A++ A + + VLT D Sbjct: 58 IVLD-SQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGAS 116 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 +I + +GG + + +KAKV + + + + Sbjct: 117 RGDVVSHI--ASDNVVGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVKG 174 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 H E++ +Q D TK L E +L A D+ A+ A + A +A + +V Sbjct: 175 SH--MELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK-EV 231 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 IVGF + V RG + G + + AD +LK ++ + +K V Sbjct: 232 MIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVEDYIPVPLKVVT 291 Query: 301 Q 301 + Sbjct: 292 K 292 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 123/320 (38%), Gaps = 12/320 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---- 56 M + L +S + IA IPK ++ GA +A +EL Sbjct: 1 MNPVLRNLLTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKG 60 Query: 57 -GVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 VD+ + GP E Q+Q++ NF+ + + ++++ + + + A++ + V+ Sbjct: 61 IKVDLIWKGPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVI 120 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 +DS K + ++ T GG L Q+ + K V + + Sbjct: 121 FDSALKTDKYVSFV--ATDNYKGGQLAAERMGQLLEGKGNVILLRYAVGSASTEEREAGF 178 Query: 175 KAKIAKEHPGWEIVT-TQFGYNDATKSLQTAEGILKAYS-DLDAIIAPDANALPAAAQAA 232 + + P ++++ Q + Q ++ +L + +++ I P A A+A Sbjct: 179 MDTLKSKFPNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKAL 238 Query: 233 ENLKN--DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 ++ KV +VGF + ++ G V+ + + ++ G + V L+ ++ Sbjct: 239 RDIGKAGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKVEK 298 Query: 291 GDKLDIKGVGQVEVSPNSVQ 310 ++ V + ++ Sbjct: 299 RIDTGVQIVTPENMEQAGIK 318 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAER--------------IAFIPKLVGVGFFTSGGNG 48 + + K + AL A + + Q E I FF + G Sbjct: 1 MSKLMKSLMAGALVFAVAACSKQGPETAQAPDAGTDGGKPAIGLAVSTQSNPFFVTLKKG 60 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 A++ ++ G+ + + + Q+ I + + + I+V+ D + A+K A Sbjct: 61 AEEEAQKQGLTLITVD-AQDDPAKQIASIEDLIQKKVKVILVNPTDSDAVVGAVKAANAA 119 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 G+ V+T D + ++ + GG + + ++ V P + Sbjct: 120 GIPVVTLDRSVNGGEVASHV--ASDNVAGGKMAAEYLLEKIGNQGDVVELEGIPGASAAR 177 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 + + I + ++V Q D K L E IL+A ++ + A + A Sbjct: 178 ERGQGFHDVI-DQAKDVKVVGRQPADFDRAKGLSVMENILQANKNVKGVFAHNDEMALGA 236 Query: 229 AQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 QA E V +VGF + V+ G + GK +V A ++ + Sbjct: 237 VQALEAAGMKDVTVVGFDATDDAVNAVKAGKMSATVAQKPKLIGKTAVDAAKKIIDGQPV 296 Query: 289 KTGDKLDIKGV 299 + + V Sbjct: 297 DKSLPVPLDLV 307 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 108/309 (34%), Gaps = 17/309 (5%) Query: 8 KIALLSALGIAAISMNVQ----------AAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 + L+A G +S ++ + FF S NG Q K+ Sbjct: 18 ALFTLTACGGTGLSSKSDSNTKVTKKAPKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKNK 77 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 +V + + Q I + + + + +I++ V + PA+K A G+ V+T D Sbjct: 78 TNVQVSD-AQNDTAKQNSNIEDLIQKKVDVLIINPVDSSAITPAVKDANDAGIPVITVDR 136 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + + + GG + + AK+A P + + K Sbjct: 137 SSDGGKVLTLV--ASNSTKGGQMAAKYMIEKLGKDAKIAELQGIPGASATRERGKGFDGA 194 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 + +IV+ Q D K L E IL+ D+ I + + A QA + Sbjct: 195 AKGK---LDIVSKQTAGFDRAKGLTVTENILQGNGDIVGIFSQNDEMALGAVQAVKAAGK 251 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 K+ IVGF V+ G + + G++++ A ++K + + Sbjct: 252 -KITIVGFDGEADGIKAVKAGDMAATVAQKPEEMGRLALQAAYDHFNGKTVKKNVESPLS 310 Query: 298 GVGQVEVSP 306 V + + Sbjct: 311 LVTTEDANK 319 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 118/313 (37%), Gaps = 5/313 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 + L R+A I + G F+T+ GA+ A ++LG + GP E Sbjct: 27 AVFLGGLTTSCGGGGGEGEGYRLALIVGVTGDEFYTTMECGARAAARKLGARLNVQGPEE 86 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 S + Q ++N V +AI+++ + ++ A+ + + V+ D+ + E Sbjct: 87 FSPAAQTPILNAVVQSNPDAILIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEI-AL 145 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 + GG + A + K KV P ++ +Q + + I K++P E Sbjct: 146 ARISSDNVEGGRMAGEALAEQIGGKGKVLLISVKPGISTTDQRKQGFEEAI-KQYPDIEY 204 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFS 246 + T++ +D T++ L+A+ DL I + + A D+V++V F Sbjct: 205 LGTEYCNDDPTQAASITTSTLQAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVSVVAFD 264 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK--TGDKLDIKGVGQVEV 304 + RG + G+ V +A L+ G V + + Sbjct: 265 ASPTQVEDLRRGNLDVLIAQHPNDIGRRGVQIAVRYLESGEEPENKQITTGFTTVTRDNL 324 Query: 305 SPNSVQGYDYEAD 317 V+ Y Y A Sbjct: 325 DAPEVERYLYRAQ 337 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 120/301 (39%), Gaps = 7/301 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M + + + + +AL ++S QA + +A + + FF + +GA+ KELG ++ Sbjct: 1 MRMKKLTTL-ISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNL 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 ++ S ++ + + +G AI+++ D + A++ A + + VLT D Sbjct: 60 IVLD-SQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGAS 118 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 +I + +GG + AKV + + + + Sbjct: 119 RGEVVSHI--ASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKG 176 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 +++ +Q D TK L E +L A D+ A+ A + A +A + V Sbjct: 177 --SKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS-V 233 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 IVGF + VERG + G I + AD +LK ++ + +K + Sbjct: 234 MIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIA 293 Query: 301 Q 301 + Sbjct: 294 K 294 >UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Bacteria RepID=C1XTQ0_9DEIN Length = 312 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 16/319 (5%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVN 82 Q IA IPKLVG+ +F + GA++A ELG + + Y GPTE V Q++LI NF+ Sbjct: 8 AQKQITIAMIPKLVGIDYFNATEQGAKEAAAELGNIRLIYQGPTEGRVDKQIELIENFIT 67 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 + I V+A P + P L++A + G++V+TWD+D R + NQ T A +G LVD Sbjct: 68 AKVDVISVAANDPVAIAPVLEKARKAGIKVVTWDADAN--VRDVFCNQATFAGIGKALVD 125 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 ARQV + +VA SS T +QN W+ E K +AK++PG ++V T+ D + + Sbjct: 126 EMARQV-GKEGEVAIVTSSLTAPNQNAWIAEMKKVLAKDYPGLKVVDTKPSEEDQQLAFR 184 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVK 261 + +LKAY +L + A + A P AA+A + KVA+VG STP M+P+++ G +K Sbjct: 185 VTQDLLKAYPNLKGVWALSSVAFPGAAEAVQQAGKAGKVAVVGLSTPKQMKPFMKAGVIK 244 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGI 321 LW+ + G +SVY A L ++ G K K V + + D + Sbjct: 245 SVVLWNPIDLGYLSVYAAKQL-----VEKGLKEGDKIVTK------RGTFTVQKDDKSLQ 293 Query: 322 VLLPERVIFNKENIGKYDF 340 +LL IF ENI K++F Sbjct: 294 ILLGPPFIFTPENIDKFNF 312 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 100/289 (34%), Gaps = 5/289 (1%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLI 77 A I FF +G Q+A E G+++ Y + + Q++ + Sbjct: 56 AGSEEGSGKKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIEL-YITDAQDDPTIQMKDV 114 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 N + + +AII+ D + +++ + G+ V T D + +I G A Sbjct: 115 ENLITKKPDAIIIDTCDSDAIVSSIEACNEAGIPVFTMDREANGGEVISHI--GYDAIKS 172 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + K K+ + + P EIV Q D Sbjct: 173 GRMAGQYLVDTLGGKGKIVEIQGIMGTNVAQNRSQGFNEVMKDN-PDMEIVACQVADFDR 231 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVE 256 K + E IL+A ++D + A + L A +A E D++ +G + ++ Sbjct: 232 AKGMSVMENILQANPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMK 291 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 G V GK + A L+ ++ LD + V Q V Sbjct: 292 AGKVDATIAEPPFFLGKAILNTAYDYLEGKQVEPYVILDNQLVTQDTVD 340 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 119/331 (35%), Gaps = 31/331 (9%) Query: 1 MTLHRFKKIAL----LSALGIAAISMNVQAAER----------------------IAFIP 34 M AL ++A S Q + + F Sbjct: 7 MKKANMLLAALCAVGMTASLFGCSSGQAQGGDTQPQASAAPAADAASAPQREQIVVGFSN 66 Query: 35 KLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVS 94 F+ G Q+ GV + P ++ Q + + +F+ QG + I++ + Sbjct: 67 WSRSFEFYVDLEKGMQEVADAQGVKLITQDP-NGDLAAQTKQVEDFITQGVDGIVLCPID 125 Query: 95 PDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAK 154 + + Q G+ ++T D + +I + LGG L + K Sbjct: 126 SNAAVTEAETINQAGIPLVTTDIAVAGGDVASHI--ASDNTLGGQLAAQFIGEQLGGTGK 183 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDL 214 VA +PT+T + +A+++P EIV Q G + K L E IL++ D+ Sbjct: 184 VALIN-NPTITSLIERETGFTDTMAQKYPDIEIVAVQSGESKREKGLSVMENILQSNPDV 242 Query: 215 DAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT-VKEFGLWDVVQQGK 273 + A + A QA + + D + IVGF Y++ G+ +K + V+ GK Sbjct: 243 QGVFAVNDMMGLGALQAVQAAQRDDIVIVGFDATEEAVKYIKEGSALKASVAQNPVELGK 302 Query: 274 ISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 ++ ++ ++ + ++ V Sbjct: 303 TTMETMLKVIAGEQVEKNIPVPVELVTAGNA 333 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 113/315 (35%), Gaps = 19/315 (6%) Query: 7 KKIALLSALGIAAISMNVQAAER-------------IAFIPKLVGVGFFTSGGNGAQQAG 53 ++ L+A + E+ I +F S N + Sbjct: 15 LAVSTLTACSLYTGIPGRDGKEKVEEVTHKKPNELNIGVSISTTNNPYFVSMNNAIKSMA 74 Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 KE +T + + Q+ + NF++Q +AI+++ V D + PA+K A + V+ Sbjct: 75 KEKNTKLTVSD-AQNDSATQLNNVQNFISQNVDAILINPVDSDAIVPAIKAANNAHIPVI 133 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKE 173 D + + + G + A ++ KV +P + K Sbjct: 134 AMDRGSNGGTVLTTV--ASDNVAAGKMAAQAVEKLVGKNVKVLELSGTPGASATIDRGKG 191 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 ++ G I+++Q D T L T + +L+++ D+ AI A + AA+A + Sbjct: 192 FNSEAKTL--GLNILSSQSANFDRTTGLNTTQNMLQSHKDVQAIFAQNDEMALGAAKAVQ 249 Query: 234 NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 K+AI G + ++ GT+ + G++++ + + Sbjct: 250 ATGQ-KIAIFGIDGESETHDAIKAGTMTATIAQQPAKIGEMALQATYDYYQGKKIAHMIN 308 Query: 294 LDIKGVGQVEVSPNS 308 I V + V + Sbjct: 309 SPIYLVDKDNVDQHQ 323 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 7/321 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 +T+ +L+ G S + + IA I K ++ S GA++A KE G ++ Sbjct: 9 ITMSVMLSAGVLAGCG--QKSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAKEAGANI 66 Query: 61 TYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + GP E + G+V ++ + +NQ + I+++A L ++ A+ + ++T DS Sbjct: 67 IFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTVDSGV 126 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + + +I T + ++ KV P V+ Q K + ++ Sbjct: 127 DSDKVASFI--ATDNEKAASQAADVCAELIGKSGKVGVVNFVPGVSTAVQREKGFRDGMS 184 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-ND 238 K H G E++ TQ+ +D +K++ E IL A D+ AI A + + AQA + Sbjct: 185 K-HSGIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVAQALKGKGVAG 243 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 KV +V F +E G++ + + + G+ V AL+K +++ + Sbjct: 244 KVKVVAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVKNVLALMKGETVEKRIDTGVTI 303 Query: 299 VGQVEVSPNSVQGYDYEADGN 319 V + ++ VQ Y Sbjct: 304 VTKENINDPEVQKVLYPEKNK 324 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 132/313 (42%), Gaps = 7/313 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M F L A S + + + K F+ + G + A KELG Sbjct: 42 MKTRHFIYALSLLACVS---SSALAKDLNLPVVSKGFQHEFWQTVKMGTEAAAKELGDKT 98 Query: 61 TYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 +Y GP E ++ Q+QL+ N + Q N ++++A+ + L P ++ A RG++V+T+DS Sbjct: 99 SYVGPADETQIAEQIQLVENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGI 158 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + ++ T + G A +K KV + + + ++ Sbjct: 159 NSDIPVSFV--ATNNRKAGAQAADALASQVNNKGKVGIIAHVAGTSSAIERSEGFMERMK 216 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-ND 238 +++P +++ Q+ D K++ +++A DL I + + A A ++ Sbjct: 217 EKYPDIKVLPVQYSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQNLKG 276 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 KV ++GF + + +++ G ++ F + D Q G + +A L +++ + +K Sbjct: 277 KVKVIGFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKTLNAALSGQAVEKEIDIPVKF 336 Query: 299 VGQVEVSPNSVQG 311 V ++ + Sbjct: 337 VNAENINTPEIDK 349 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 5/299 (1%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQL 76 + + +I PK + ++ + GA+ A KELG ++ + GP E V+ QV + Sbjct: 21 SVGDVQASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNV 80 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 IN+FVN+ +AI+V+A + L P LKRA + G+ V+T DS + +I T + Sbjct: 81 INDFVNKKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFPISHI--ATNNKE 138 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + K +VA K I+ + ++V Q+ +D Sbjct: 139 AAKKAAEVLANIIGKKGEVACIPFVAGAATSIARENGFKEGIS-NYKNIDLVAVQYSQSD 197 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-KVAIVGFSTPNVMRPYV 255 +++ E IL A+ +L I A + AA+A + V +VGF + Sbjct: 198 YATAMKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAM 257 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 + G + + G V A A L+ ++ + ++ V + Sbjct: 258 KEGIIDALIVQRPYMMGYEGVKNAVAALEGEEVEKLIDTGVVVATPDNMNDPEVYKVLF 316 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 115/327 (35%), Gaps = 19/327 (5%) Query: 4 HRFKKIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 A+L+ G S++ + + + + FF G + E+G Sbjct: 14 TLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGMEKGVKDKTSEIGCK 73 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + + ++ Q+ I + + + + +IV+A+ D + PA+K+A + + ++ D Sbjct: 74 LI-ETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKAKEANIPIIFLDRGA 132 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDK----AKVAFFYSSPTVTDQNQWVKEAK 175 E + ++ T G + KDK V + K Sbjct: 133 NSEDMTTFLE--TDNVKMGEQAAELILKALKDKGLNGGNVVEIEGLQGTSAARDRGKGFH 190 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 + K H +IV Q G + KS+ + IL+A +DA+ + + A +A Sbjct: 191 NVMDK-HKEVKIVAKQAGDFNQEKSMNVMQNILQANPKIDAVFGHNDDCTVGAEKAIIAS 249 Query: 236 KNDK-------VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 K + +VG N V++G + D + G +V V +K + Sbjct: 250 NRMKPAGDKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIGMGVQAVEVGLKAIKGEQV 309 Query: 289 KTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + + + + S G + Sbjct: 310 EKHIYTKFFPITKDNATDESNWGNKVK 336 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 116/297 (39%), Gaps = 9/297 (3%) Query: 9 IALLSALGIAAISMN--VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 ++L LG S ++I + + FF S GA++ KELG ++ + Sbjct: 13 ASILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLD-S 71 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + + + I + + G + +IV+ D + +++ A + + V+T D Sbjct: 72 QNDPAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVS 131 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDK--AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 +I + GG L K+K KV P + + K I K+ Sbjct: 132 HI--ASDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKK-SN 188 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVG 244 +++++Q D + L E I++A SD DA+ A + AA+A + K+ +VG Sbjct: 189 LKLISSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKTANK-KIIVVG 247 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 F + +E+ + G S+ A + ++ + ++ + + Sbjct: 248 FDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQNISKNIPVKLRLITK 304 >UniRef50_B8E1T5 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=2 Tax=Dictyoglomus RepID=B8E1T5_DICTD Length = 334 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 103/339 (30%), Positives = 174/339 (51%), Gaps = 12/339 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + +F + LL L + Q I + K G FF + GAQ+A KELG+ V + Sbjct: 1 MKKFLIVLLLVLLIVLGTESFAQKKYVIGLVTKTAGNPFFEAVNKGAQEAAKELGITVIH 60 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P SV GQ+ +IN+ + Q +AI +SA PD L P ++A RG+ V+T+DS KP+ Sbjct: 61 QAPAASSVQGQIDIINSMIAQKVSAICISANDPDALVPVCRKAQLRGIPVVTFDSAVKPQ 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK-E 181 R ++NQ Q+G + V ++ + ++A ++ T+ +QN W+ K ++ K E Sbjct: 121 GRKLFVNQADMEQIGRIQV-QLLAKMINYEGEIAILSAASTMANQNTWIAWMKEELKKPE 179 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKV 240 + ++V +G + KS A G+ K+Y +L IIAP + AAA+A E+ + KV Sbjct: 180 YSKMKLVAIVYGDDIREKSYNEAMGLFKSYPNLKGIIAPTTVGIAAAARAIEDAGLSGKV 239 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGV 299 + G P+ M YV+RGT K F LW+ + G ++Y LL + G+K+++ + Sbjct: 240 QLTGLGLPSEMAEYVKRGTCKAFALWNPIDLGYATIYATYRLLNREIKGNVGEKVNLGRL 299 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 G+ + E +G +++L +F+ NI + Sbjct: 300 GERTIVD--------EGNGGRMIILGPPFVFDAANIDYW 330 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 126/335 (37%), Gaps = 22/335 (6%) Query: 1 MTLHR-FKKIALLSALGIAAISM-----------------NVQAAERIAFIPKLVGVGFF 42 M +AL++ + ++A I I K F+ Sbjct: 1 MKKFTALLVVALMTVVMLSACGSNNSDGSSKSGTDNGGTKASGDKIYIPIISKGFQHQFW 60 Query: 43 TSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPA 101 + GA++A E V++T++GP TE V Q++++ +++ +AI +A+ P Sbjct: 61 QAVKAGAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAIGFAALDSQASVPL 120 Query: 102 LKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS 161 L++A G+ V+ +DS + T L ++ + ++ Sbjct: 121 LQKAKAAGIPVIAFDSGVDSDIPIT--TASTNNVAAAALAADKMAELIGGEGEIGVIVHD 178 Query: 162 PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 T +I +++P +IV Q+G D KS A+ +++A+ ++ + Sbjct: 179 QTSVTGVDRRDGFVNRIKEKYPNIKIVDIQYGGGDHLKSTDLAKAMIQAHPNIKGFFGSN 238 Query: 222 ANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 + A LK ++ ++GF + ++ G + + V G +V A Sbjct: 239 EGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVMAGAITQNPVGIGYETVKAAV 298 Query: 281 ALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 ++ +++ + + + ++ YE Sbjct: 299 EAIRGEKVESTIDTGFYYYDKSNIDSDEIKAVLYE 333 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 12/327 (3%) Query: 1 MTLHRFKKIAL--------LSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQA 52 M ++ +A LSA G + + IA + K F+ S GA A Sbjct: 1 MKKSKYIALAAVAAFTVAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDA 60 Query: 53 GKELGVDVTYDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 + G VT++GP S V Q ++ N +N+ +A+ ++ + L PA++ A + Sbjct: 61 AAKYGATVTFNGPDNDSQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIP 120 Query: 112 VLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWV 171 + +D+ + + T + G + + K K A S T + Sbjct: 121 LFAFDTAFETNADAITSTVKTSNREVGKVAAENLIALLNGKGKYAVIAHSQTDATSTERR 180 Query: 172 KEAKAKIAKEHPGWEIV-TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ 230 + K P E+V Q+ D K+ A IL+A DLDAI A + + AA Sbjct: 181 DGFLDYMKKNAPDMEMVGEVQYSNADQAKAQDIASAILQANPDLDAIFATNEATVVGAAT 240 Query: 231 AAENLKND--KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM 288 E+ KV +VG + + Y+ G + + Q G ++ A L + Sbjct: 241 PVESALKSGHKVLLVGVDSGKAQQQYIRDGVISGSVSQNPYQIGYKTIENAVKSLNGEKI 300 Query: 289 KTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + + VQ YE Sbjct: 301 DKVIDSGCFWYNADNIDDDDVQQAMYE 327 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 5/297 (1%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD---GPTEPSVSGQVQLINNFVNQGYN 86 +A +PK VG F+ + GA A K +V E V+GQV L+ NF+ QG + Sbjct: 45 LAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGVD 104 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 ++ +A L ++A+ +G+ V+ DS T P+ + + + Sbjct: 105 GLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPENVPVFATDNVAAAERATEYLVE 164 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 Q+ +D KVAF P + + K + + P ++V Q ++ ++LQ E Sbjct: 165 QLGEDGGKVAFIPFQPGTATNDTRTEGFKNVLKEN-PQVKLVAEQSSESNYNRALQVTED 223 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL A+ DLDAI A + + AA+A + ++ IVG+ T V G V Sbjct: 224 ILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGVVSALIA 283 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIV 322 + + G V A +++ G G V + + VQ + N V Sbjct: 284 QNPFRMGYDGVNAAVKMIRTGEQVEGGDTGAILVTRENIDDPEVQRVLDPSCENPPV 340 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 111/308 (36%), Gaps = 11/308 (3%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ 75 + ++A + + +F A+Q ++LG + T ++ + + Sbjct: 22 FTGLAQEQQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFD-SQNDTAKESA 80 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + + GY+AII + DG +KRA + G+ V D + Sbjct: 81 HFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINARG-LAVAQIYSDNY 139 Query: 136 LGGMLVDMAARQVNKDK---AK---VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 GG+L+ + K+K AK A + + + ++P +++V Sbjct: 140 YGGVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVV-DQYPEFKMVA 198 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPN 249 Q D + + E IL+A+ ++ AI + A +A E + I GF Sbjct: 199 QQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRTDIYIFGFDGAE 258 Query: 250 VMRPYVERGT-VKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDIKGVGQVEVSPN 307 + ++ G + + +++V AD L+ S + ++ V + + Sbjct: 259 DVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLRGERSFPEIVPVTVELVTRENIDKY 318 Query: 308 SVQGYDYE 315 + G E Sbjct: 319 TAYGRKEE 326 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 8/305 (2%) Query: 1 MTL--HRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 M H + L +AL + S + A + IA + + FF + +GA+ ELG Sbjct: 1 MKRLAHHKVSVLLSAALLSVSTSFSASAQDAIAIVLSTMNNPFFVTMKDGAEAKAAELGY 60 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + ++ S ++ + + +G AI+++ + A++ A + + VLT D Sbjct: 61 KLIALD-SQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRT 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 +I + GG L Q AKV + + + + Sbjct: 120 AAHGDIVSHI--ASDNIAGGELAGEFIAQQLGKNAKVIQLEGIAGTSAARERGEGFSNAV 177 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND 238 +E++++Q D +K L E +L A D+ A+ A + A +A E D Sbjct: 178 TAN--NFELLSSQPADFDRSKGLNVMENMLAANGDVQAVFAQNDEMALGALRAIEAAGKD 235 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 + ++GF + V R + G ++ AD +LK ++ + +K Sbjct: 236 -ILVIGFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKGQVVEKSIPVALKI 294 Query: 299 VGQVE 303 + Q + Sbjct: 295 ITQTQ 299 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 132/331 (39%), Gaps = 15/331 (4%) Query: 1 MTLHRFKKIALLSALGIAAIS----MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 M+ +L+ + A++ Q IA IP L GF+ + GA++A K L Sbjct: 1 MSKRVKWVFTVLTLSLLIAVAMYGLAQQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRL 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 GV++ + G E S + Q+ ++N + + +AI+++ + L LKRA + G++++T D Sbjct: 61 GVELIFQGGPEFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITVD 120 Query: 117 SDTKPECRSYY---------INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 + + + GG + A + +K KV P ++ Sbjct: 121 TFIGENGQYQTGKGNADFPLAYVASDNVEGGRIAARALAKAIGEKGKVYVSNVKPGISTT 180 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 +Q + K ++ K +PG ++ TQ+ NDA K+ L DL + + + Sbjct: 181 DQREQGFKEEMKK-YPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAIG 239 Query: 228 AAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG 286 AA +N V + F P + ++ GT+ + G+I+V A L Sbjct: 240 AANGVKNAGKRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKALNGE 299 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 + + + V + Y + Sbjct: 300 KIPNRYGTGYTVIDRANVDSAEAKAAIYSSK 330 >UniRef50_Q01NP6 Inner-membrane translocator n=3 Tax=Bacteria RepID=Q01NP6_SOLUE Length = 682 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 16/322 (4%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A + IA +PK G +F S GA++A +ELGVD+ +DGPT + Q +++ Sbjct: 377 AAAAKTGKRPVIAVMPKAKGDPYFISCKAGAEEAARELGVDLIWDGPTGLDAAKQNEVVE 436 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 ++ +G +AI VS + G+ L++A +RG++VLTWD+D P+ R Y+INQ TP +G Sbjct: 437 GWITRGVDAIAVSVENGPGISTVLRKARERGIKVLTWDADAAPDARDYFINQATPEGIGN 496 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 L D ++ K + A + +QN W+ K ++A+++P ++VT + +D Sbjct: 497 TLTDE-GARLIGGKGEFAIVTGALGAANQNAWIDFIKKRVAEKYPQLKLVTIRPSDDDRD 555 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 K+ + I+K Y ++ IIA A A+P AA+A + V ++G S PN+ + YV G Sbjct: 556 KAFSETQTIMKVYPNVKLIIAISAPAVPGAAEAVQQSGRKDVDVIGLSLPNLCKRYVHDG 615 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADG 318 + LW+ G ++VY A L++ +G + + Sbjct: 616 VAQAVVLWNTKDLGYLTVYTAAKLVQG------------PLGSGSFQGGRLGTIEIR--- 660 Query: 319 NGIVLLPERVIFNKENIGKYDF 340 V+L + IFNK NI +YDF Sbjct: 661 GTEVILGKPFIFNKANIDQYDF 682 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 9/299 (3%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TE 67 +ALL+ G + + ER+A + K + ++ GA+ AGKELGVDVT GP E Sbjct: 18 MALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAGKELGVDVTVVGPNAE 77 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 V Q+ +I + +NQ A++VS PD + P L+ A V VL D+D K + ++ + Sbjct: 78 SEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPVLLIDTDAKLKNKTSF 134 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 I GT G + + KVA + T ++ VK AKA + + G I Sbjct: 135 I--GTENYEAGYEGGKLLSSLLQKGDKVAIISGALGNTATDERVKGAKAALEEA--GMVI 190 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFST 247 V Q +D TK++ E IL+ +D+ + A + + +A E D V ++G Sbjct: 191 VAEQPADSDKTKAMSVMENILQKNNDVKGVFAANDDMALGVLRAVEAKGLD-VKVIGTDG 249 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + G + + + G V A A + + ++ + + Sbjct: 250 TLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGEKVDKRINSGVEVITKDNAQE 308 >UniRef50_A8S1T0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1T0_9CLOT Length = 368 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 167/326 (51%), Gaps = 15/326 (4%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 A +IAFIP+L+G+ +F++ +G ++A ++LGV+ Y G T+ S + QV++ Sbjct: 56 AAKTEEGTGDKVKIAFIPQLIGIPYFSAMESGGKKAAEDLGVEFLYTGSTQASAAEQVKI 115 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 +++ + QG NAI +S + P +K+A + G++V T DSD R +Y+ Q L Sbjct: 116 MDSLIKQGVNAISLSVLDSSSTNPYIKKAQEAGIKVYTSDSDAPDSTRDFYVAQALDKDL 175 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFG-YN 195 G L+D Q+ KV T T+ N W+ K + +++P EIV ++ Sbjct: 176 GTTLMDCLGEQM-GGSGKVGIVSGESTATNLNTWIDYIKQRQEEKYPDIEIVDIRYTQGG 234 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPY 254 + ++L+ A+ ++ Y DL ++A ++ +P AQA + +VA++G+ +P ++P+ Sbjct: 235 SSEQALKQAQELMTRYPDLKGLVAVASSTIPGVAQAVQQEGKAGEVAVIGYGSPATVKPF 294 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 +E G +K+ LW+ G ++V+ + + ++++ + Sbjct: 295 IESGVMKQSVLWNAYDLGYLTVWAGKMAAEGKEFEATNQIEC------------IADPVT 342 Query: 315 EADGNGIVLLPERVIFNKENIGKYDF 340 N I+LL + +I +K+N+ +DF Sbjct: 343 WDAENKILLLGQPLIIDKDNVNDFDF 368 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 12/295 (4%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 ++ IA +PK + FF G +Q KELGV Y P + + QV++I + Sbjct: 68 PTVAPGTKITIAMVPK-LVHPFFEDCRKGGEQKAKELGVTFEYVAPQQADPALQVKIIED 126 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 + + +AI +S P + P + M++G+ ++T+D+D+ R YI GT + G Sbjct: 127 LIRKKVHAISISPNEPKSVEPVIAEGMKQGILMMTFDADSPNSQRVMYI--GTDNKAAGK 184 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ + KV + NQ ++ K + P ++V Q +D K Sbjct: 185 TMGETMAKLLNGRGKVGIITGGLGALNLNQRIEGFKEGVG---PNIQVVDVQATDDDLQK 241 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE----NLKNDKVAIVGFSTPNVMRPYV 255 L +E +L+A+ DL+ I A P AQ + + K+ IV F + + Sbjct: 242 GLSVSEAMLRAHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAI 301 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG--DKLDIKGVGQVEVSPNS 308 + G + + VQ G ++V A +L + + V + ++ + Sbjct: 302 QEGIIAATMVQRPVQMGVLTVQWAYDILTGKAKPPFKNIDTGVTVVTKENLNSYT 356 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 109/306 (35%), Gaps = 9/306 (2%) Query: 8 KIALLSALG----IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK-ELGVDVTY 62 A+L A S + I + + +G ++ K + V+V Y Sbjct: 33 SFAMLVGCSGKQETAQTSGDKSGKIVIGAALPDFDDKWLSYLQDGMKEYEKTQKDVEVIY 92 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 S Q+ + NF+ Q +AI++ V + +A Q + ++ + Sbjct: 93 VDAMN-DASKQLSQVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNRIFDGV 151 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + G+ + G++ ++ K K+A Q + + K I K + Sbjct: 152 DK-ATAYVGSESIKAGIMQMEEVAKLLNGKGKIAIMNGQMGHEAQIKRTEGNKQVIKK-Y 209 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVA 241 P ++V D K + E L++ +DA++ + A A E+ D V Sbjct: 210 PDMKVVLEGTAEWDRAKGMSLMENWLQSGKKIDAVVCNNDEMAIGAIMALEDEGKLDDVI 269 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 + G YV+ G +K + QG++ + VA K ++ + + + V + Sbjct: 270 VAGVDATPDALEYVKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEKVEKFNWIPYELVTK 329 Query: 302 VEVSPN 307 V Sbjct: 330 DNVEEY 335 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 250 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 107/307 (34%), Gaps = 17/307 (5%) Query: 15 LGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQV 74 + E + G+ ++ G + A GV Y G + V+ QV Sbjct: 35 ASSGNPKLKGSPKEEYYMVTFASGIEYWKGCFKGMKAAADLYGVKAIYTGAPQFDVNQQV 94 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++ + + I+V+ +PD L + A+++G+ V+T+D+D+ R + G Sbjct: 95 TVLRQVIAKKPAGILVTCANPDALKAPIDEAIKKGIPVITFDADSPKSLRYSVLETG--N 152 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 G + ++ K +V + + Q + + KE PG ++V+ Sbjct: 153 YNAGAMAARYLGKLLGGKGEVGI-STVAAQLNHEQRKQGFIDTLKKEFPGIKVVSIVNDE 211 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRP 253 ND+TK+ + +L+A+ ++ I DA A A + K+ IV F T Sbjct: 212 NDSTKAARGVAAMLQAHPNIKGIFCTDAPGGVGVATAIKEANKVGKIKIVSFDTDKGTLD 271 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKK-------------GSMKTGDKLDIKGVG 300 +++G + G + L + V Sbjct: 272 LIKQGVIDASIAQGTWNMGFWGMTFLFYLKHGIVNPVDNWKKFGINPLPPYVDTGTMVVT 331 Query: 301 QVEVSPN 307 + V Sbjct: 332 KQNVDAF 338 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 113/290 (38%), Gaps = 9/290 (3%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPT-EPSVSGQVQ 75 + Q + I K + FF + GA+ +E G ++ G E Q+ Sbjct: 54 SVGMAAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYELLAVGMQNETDFESQIN 113 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY----YINQG 131 + NF+ QG +AI+V+ + L+RAM+ G+ V+ +D G Sbjct: 114 AVENFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIELAFVG 173 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 ++G + A + + +V +P + Q + IA G E++ ++ Sbjct: 174 PDNRMGAEMAGNALGEALGEGGRVVIIEGNPGADNATQRRLGFEDAIATH--GLELLESR 231 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVM 251 + + ++ Q +L A+ DL ++A + + +A + D + +VGF + Sbjct: 232 TAHWETEEANQVFAAMLTAHPDLQGVMAANDSMAIGVIEALDAAGRDDILVVGFDAVPAV 291 Query: 252 RPYVERGTVKEFGLWDVVQQGKISVYVADALLK-KGSMKTGDKLDIKGVG 300 P +E G + ++ +A +L+ ++ + I+ V Sbjct: 292 LPMIEDGRMLATVDQFGQAMAANAIDLALEVLETGVDLEGWVRTPIELVT 341 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 8/314 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMN-VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 M K I SAL A ++ +IA + K + +F S GA++ KE +D Sbjct: 1 MASKLLKNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNID 60 Query: 60 VTYDGPTEPSVSGQ-VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + + + Q V L+ N + + +AIIV+ PA ++A + G+ ++ D Sbjct: 61 LIVQVAEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVR 120 Query: 119 TKPECRSY----YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 + + G GG L + K VA P V + Q A Sbjct: 121 LDAKAAEAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGA 180 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 A+ +P +IV +Q + ++L IL A +++ I A + N A A EN Sbjct: 181 LKAFAE-YPDIKIVASQSANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVEN 239 Query: 235 LK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 KV + G+ + YV++G ++ +Q I++ A + K + Sbjct: 240 AGLAGKVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEIPPVYY 299 Query: 294 LDIKGVGQVEVSPN 307 +D V + E Sbjct: 300 VDPVVVDKEESKNY 313 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 111/309 (35%), Gaps = 6/309 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M F K L + L A + + + IA I FF +G GA KELG D Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGYD- 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T + V+ Q QLI + + A+I+ D +L+R + G+ +D + Sbjct: 60 TLVASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREIN 119 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + G L ++ D + + T+ + I Sbjct: 120 KTGI-AVTQIVSNNFQGAQLAGEKFAELMGDGGEYVELLGPESDTNAQVRSEGFHD-ILD 177 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 P +++V Q T++ E IL+A ++ +I + + A A + V Sbjct: 178 NFPEFKMVARQSANWSQTEAFSRMESILQANPNIKGVITGNDSMALGAEAALQAAGRKDV 237 Query: 241 AIVGFSTPNVMRPYVERGT-VKEFGLWDVVQQGKISVYVADALLKKGS--MKTGDKLDIK 297 IVGF + +R + +G+ +K + Q + AD ++ GS + +D Sbjct: 238 FIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQADLYIRTGSTGLPEKQLMDCV 297 Query: 298 GVGQVEVSP 306 + Sbjct: 298 LIDSSNAKN 306 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 119/315 (37%), Gaps = 7/315 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VD 59 M + A L + + I FIPK F+ NG ++A +E G +D Sbjct: 1 MKKYLTFLFACW-VLLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEGQID 59 Query: 60 VTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 +T+ GP Q++++ + G +AI+++ L +++A++ G++V+ DS Sbjct: 60 LTWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSA 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 ++ T G L ++ + +V + + + + Sbjct: 120 LDGSGHLQFVT--TDNHASGQLAARQLAELMGQRGRVVLLRTVAGSASTDDRARGFIDYL 177 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-N 237 + P IV +G A K+ +A +L +D DAI A + +A +A Sbjct: 178 SANAPAISIVADVYGGGSAGKARHSASALLAKSADFDAIFAVNESATDGMLRALREAGLA 237 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG-DKLDI 296 + +GF + + +E+ + + D + G +++ A L+ +K Sbjct: 238 GRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRNRPIKESVIHTGT 297 Query: 297 KGVGQVEVSPNSVQG 311 V + ++ Sbjct: 298 TLVTRANFRRPEIKK 312 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 102/289 (35%), Gaps = 4/289 (1%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 + +A+ I F FF AQ+ ELG+ + + + + Q + N Sbjct: 40 TTTGSASAKTITFALSTQANPFFVQMRESAQKKADELGLAINFQDAAD-DSATQSNQLAN 98 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 G +I++ D + PA+++ + + V+ D + YI + + GG Sbjct: 99 AAASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVNNANVASYI--ASDNETGGK 156 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 + ++ + + K + P ++V Q + K Sbjct: 157 QAAKVLSDAINGEGEILVLQGKTGSSASRERGKGFDEGLKDN-PNIKVVAKQTAEFERAK 215 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 L +L+A+ ++ AI A + A +A + V ++GF ++ G Sbjct: 216 GLDVTTNLLQAHPNVKAIFAENDEMALGAIEALGSKAGKDVKVIGFDGAEDALKAIKDGR 275 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + V+ + +V A LLK + ++++ + V S Sbjct: 276 MYASIAQQPVKMAEQAVIEASKLLKGETATKKMQVEVVAATKENVDKFS 324 >UniRef50_C0C2I7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2I7_9CLOT Length = 348 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 27/357 (7%) Query: 2 TLHRFKKIALLSALGIAAISM-----------------NVQAAERIAFIPKLVGVGFFTS 44 R + L++AL + ++ Q I PK + + Sbjct: 1 MKKRMLSMVLITALLLCGLAGCTTEKAGGASGDKKDEGKSQEKVTIGMCPKFTSDPYMVA 60 Query: 45 GGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKR 104 G GAQ+A ELG + ++GP ++ Q +I+ + + Y AI +SA D L PA+K Sbjct: 61 AGEGAQEACDELGYTLDFNGPVNADIAAQSDIIDQWTQKKYTAITISANDADALSPAMKA 120 Query: 105 AMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 A G+ WD+D + R ++NQ T +G +VDM + + T Sbjct: 121 AQDAGIYTSAWDADVNADSRELFLNQVTFEGMGKTMVDMMVEEA-GSSGDFLVVTAVLTA 179 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 +QN W++E K + +P +IV G D KS L+++ + + A A Sbjct: 180 PNQNAWIEEMKKYMEANYPDMKIVDILAGDEDLAKSRDVTLNYLRSHPETKGVFAVTGMA 239 Query: 225 LPAAAQAAENL-KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 P +A E L KVA+ G P++++ Y+++GT+ + LW G ++Y+A + Sbjct: 240 SPGVCEAIEQLDLVGKVAVTGLGVPSLIKDYLKKGTINQCCLWSPYDIGYGAMYLAKTQI 299 Query: 284 KKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 + Q + + ++ GIVLL + +IF K+N+ YDF Sbjct: 300 DGKLDEAK--------EQGYIEAGRLGKLEFIDKDKGIVLLGDPLIFTKDNVDDYDF 348 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 114/313 (36%), Gaps = 4/313 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M L + ++L + + + +I F T Q K+ G Sbjct: 1 MKLKKLIVTSVLMCML---PASVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDGNVS 57 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + ++ Q+Q I NFV+QG +AII++ V G+ P +K A + ++ + + Sbjct: 58 GQFEDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPE 117 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + G+ ++L G L ++ K V + + + +A Sbjct: 118 VTLPAGMAYVGSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRGVEE-VAA 176 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 ++PG +I+ Q +++ +DAI + + A A + K V Sbjct: 177 KYPGIKILDKQTAKWGRKEAVDITTDWALTGQQIDAIASNNDEMAIGAILALKQAKKSGV 236 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 + G Y+++G + D QG+ +V A L+K +++ + + + Sbjct: 237 LVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVESNVLIPYQLIT 296 Query: 301 QVEVSPNSVQGYD 313 + + + Sbjct: 297 KANYQEFADKNRK 309 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 114/291 (39%), Gaps = 6/291 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + + F + FF + ++ E G ++ + Q+ ++ + + Sbjct: 63 GGKEHYKFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVID-AQNDAQKQISMVEDLLT 121 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 QG + + + + + +L++ + GV V+ +D+D I G ++ + Sbjct: 122 QGIDLLFLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDLVNTIIVSDNYYAGELVAE 181 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 +++ + +KV SP+ + K K A + ++IV+ G D SL Sbjct: 182 DMMKKL-PEGSKVCILT-SPSAEACIKRQNGFKDK-ADGY--FKIVSEIDGKGDTATSLG 236 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKE 262 AE +L+ DL A A + + QA E+ K V + G + + + GT++ Sbjct: 237 IAEDVLQGNPDLGAFYAINDPSAIGCVQALESQKKTDVLVYGVDGQPMGKQAISEGTMEA 296 Query: 263 FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + GK SV A +L S++ + + + V+ + G+ Sbjct: 297 TAAQSPINIGKESVAAAYKILSGESVEKNILVPTFLIDKNNVTEYGLDGWQ 347 >UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YAA5_DICT6 Length = 331 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 113/316 (35%), Gaps = 14/316 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL----- 56 ++ + A + A+IPK + F G +GA + +EL Sbjct: 1 MKKFLMIFFIVVIFLLMATTAQTPKKLVFAWIPKALNNPVFELGRDGAFKRAEELSKKGP 60 Query: 57 -GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 V+V Y + Q +++ + V + + I +S P L + +A++ G+ V+T+ Sbjct: 61 YKVEVLYVASVASDATEQARVVEDVVARKVDGIAISCNDPTALIDVINKAVEAGIPVMTF 120 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 D+D+ R + G GG + VA P + + ++ K Sbjct: 121 DADSPKSKR--FTYLGVNNYEGGKWAAKLLVRAMGTSGDVALLTGVPGALNLEERMRGFK 178 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA--- 232 +I K +P +IVTT Y+D + +Q E ++ Y L L A + Sbjct: 179 DEIKK-YPKIKIVTTVACYDDINRGVQVVEETMQKYPKLRGWFFVGLWPLLAERGSMPLW 237 Query: 233 -ENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD-ALLKKGSMKT 290 + K KV V F T V ++ G + G ++ + ++ Sbjct: 238 EKAAKAKKVFTVAFDTLPVELQLLKEGYLCGLVGQKYWGWGYDAIDILYRKVVNNEKFPD 297 Query: 291 GDKLDIKGVGQVEVSP 306 + V Q V Sbjct: 298 WIDSGMDIVTQKNVDA 313 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 118/297 (39%), Gaps = 4/297 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFV 81 + +P+ + ++ GA+ A +EL VD+ Y GP + ++ ++++ Sbjct: 44 AKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDVDLEYIGPRQANIDEHLRILKKAA 103 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLV 141 + II ++ P + + + + VLT D+D R YI GT G + Sbjct: 104 AAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYI--GTDNYYAGFIA 161 Query: 142 DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSL 201 A + + VA S T Q Q V+ + + K IV + + ++ Sbjct: 162 GRALVEDTQGMVNVAIITGSLTAVHQQQRVRGFRDAV-KNEKRIRIVAVEESHITRVQAA 220 Query: 202 QTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPNVMRPYVERGTV 260 + ILK + +++A A A+ E ++ I+GF T Y+++GT+ Sbjct: 221 EKTYTILKKHPEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTI 280 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 + + + + G +V + ++ + + K + + ++ + Y+ + Sbjct: 281 EATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIRKEDLPLRPARNYEVKTP 337 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 117/310 (37%), Gaps = 11/310 (3%) Query: 4 HRFKKIALLSALGIAAISMNVQ----AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 LL++ + S Q + + F + + + ++ G++ Sbjct: 11 TTLSIFLLLASCNQSGTSETSQDGEGKKLVVGATMLSMQNEFIVNVHDEMDKEAQKAGIE 70 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + E S QV+ + +F+ Q +AII++ + PA+ +A+ + ++ +S+T Sbjct: 71 LITVD-AERSALKQVEQVESFIAQKVDAIIMNPCEVEASSPAVAKALAAKIPIINVNSET 129 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + + G+ + K V + Q + + A+ I Sbjct: 130 SSKPSA---FVGSDDVESARIAMKFIADKLGGKGNVVMMHGYMGQAAQIKREQGARE-IL 185 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAY-SDLDAIIAPDANALPAAAQAAENLK-N 237 K++P +++ Q G D K++ E +++Y S ++A+ A + A +A + Sbjct: 186 KQYPNLKLLAHQTGEWDRAKAMSLMENWIQSYGSQINAVFAHNDEMGLGAVKALTDAGLK 245 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 DKV +V V++G++ + QQG ++ A K + + Sbjct: 246 DKVIVVSIDAIPDALQAVKKGSLDATVFQNAEQQGAKAIATAIKAAKGQPFDKETLVPFQ 305 Query: 298 GVGQVEVSPN 307 V + +S Sbjct: 306 LVTKDNLSKF 315 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 100/326 (30%), Gaps = 21/326 (6%) Query: 1 MTLHRFKKIALLSALGIAA-------------ISMNVQAAERIAFIPKLVGVGFFTSGGN 47 M F +A L + + I + FF G+ Sbjct: 1 MKHRLFIALACLLTVFAGCNKSENASTSTDTQPPTGSASKGTIGVSLLTLDNPFFKVIGD 60 Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 GK+ G D + V+ Q I +F+ + +AI++S + P ++ A Sbjct: 61 NIVSEGKKRGYDAVVV-SGDKDVAKQSNQIKDFIVKKVSAIVLSPCDSKSIVPVIQEANA 119 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD-KAKVAFFYSSPTVTD 166 G+ V T D T GG A + + K+A Sbjct: 120 AGIPVFTVDIPCHEPGVKIATQIATDNYGGGKEAAKAMIEALGEAGGKIAIL-HFKQAES 178 Query: 167 QNQWVKEAKAKI----AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 VK + I A+ +IV + + AE L+A DL I A + Sbjct: 179 CQLRVKGFREIIDAHNAEGKSKVDIVAELESGGAKDQGYKAAEDTLQANPDLHGIFAIND 238 Query: 223 NALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 A A A E D+V IVGF + ++ G + + + G V Sbjct: 239 PAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGKIYADPIQFPDKMGAQIVDAIIQ 298 Query: 282 LLKKGSMKTGDKLDIKGVGQVEVSPN 307 K ++ + + + + Sbjct: 299 QSKGETLPPQMLIPTSLYKKADAEKD 324 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 114/291 (39%), Gaps = 6/291 (2%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ 83 + + + + FF + ++ G + P VS Q+ IN+ + Q Sbjct: 37 TKKKHKFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITMDPA-MDVSKQIDQINDMITQ 95 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 G A+ ++ V +G+ P L+ + + ++ +D++ K G+ + G + Sbjct: 96 GVEAVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNY-VTAYVGSDNKNAGKVCGD 154 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 + + K+A PT+ N + K+ I + + IV Q G D S++ Sbjct: 155 DLVKRYPNGGKIAILNC-PTMNSINDRIAGFKSAIEGK--NFTIVAEQDGKGDLQTSMKL 211 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER-GTVKE 262 A+ IL+++SD+ AI+ + A A ++ K K+ I G + + G Sbjct: 212 ADDILQSHSDIVAIMGGNDPTALGALAACKSAKQSKILIYGVDGSPDAKKEIASGGQFVG 271 Query: 263 FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 G Q G S + +L K +++ + + + VS G+ Sbjct: 272 TGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQTFLINKDNVSKYGTTGWQ 322 >UniRef50_C2KTG0 ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Bacteria RepID=C2KTG0_9ACTO Length = 349 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 132/349 (37%), Gaps = 23/349 (6%) Query: 3 LHRFKKIALLSALGIAAISMNV-------QAAERIAFIPKLVGVGFFTSGGNGAQQAGKE 55 + +A SAL S RIA +PK +F G ++ + Sbjct: 13 IPVMAALACGSALLTGCESGKSTSADGKKSDKVRIAIVPKDATNPWFVRMEEGVKKYAAD 72 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 G+DV GP + Q Q+I + + Q +AI V V P L P LK A G+ V+T Sbjct: 73 SGLDVFQRGPAATDATQQAQVIRDLIAQKVSAIGVVPVDPGALEPVLKEARDAGIVVITH 132 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + + Y I + GG ++D A + + T N+W Sbjct: 133 E-GASQKNTQYDIEAFSNEAYGGFIMDNLADGM-GQEGVYTTMVGHITNASHNEWADSGV 190 Query: 176 AKIAKEHPGWEIVTTQF---GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 +++P +++ Q + A + Q A+ +LKA+ ++ I + P A+A Sbjct: 191 KHQKEKYPKMKLLEAQPRVESGDTAEGAYQAAKEVLKAHPEVRGIFGTSSFDAPGVARAI 250 Query: 233 ENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 E + KV G P + ++ GTV LWD G +A +L + G Sbjct: 251 EEMGLKGKVFTSGTGMPQANKEILKNGTVHALTLWDPADAGYAMAALAKKVLDGEKISEG 310 Query: 292 DKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 L +KG + + D + ++ + +N+ ++F Sbjct: 311 LDLGVKGY----------ENMKFNKDNDKVLEGKGWIAITSDNVDDFNF 349 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 103/318 (32%), Gaps = 9/318 (2%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 R + +A ++ IA + K F+ + G + A ++ V++ Sbjct: 2 RLLTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLILQA 61 Query: 65 -PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP-- 121 +E V Q+ N + + A++V+A++ L P LK+A Q+ + ++ D + P Sbjct: 62 VASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDPAV 121 Query: 122 ---ECRSYYINQGTPAQLGGMLVDMAARQVNKDK--AKVAFFYSSPTVTDQNQWVKEAKA 176 E + + + G KV Sbjct: 122 LQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGFTE 181 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 ++ + P +IV T G D K+ L+ + DL AI + A +A Sbjct: 182 RLKQIAPNAQIVATLPGDWDRLKAANITNDTLQRHPDLAAIYCANDTMALGAVEAVFAAG 241 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 KV +VG + + G + G ++ ++K + + Sbjct: 242 K-KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVDPKIIVPT 300 Query: 297 KGVGQVEVSPNSVQGYDY 314 + + + N Y Sbjct: 301 LVIDKAILEANRDPLLQY 318 >UniRef50_B7R620 Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=3 Tax=Bacteria RepID=B7R620_9THEO Length = 344 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 76/359 (21%), Positives = 157/359 (43%), Gaps = 34/359 (9%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAE-----------------RIAFIPKLVGVGFFT 43 M + +++L + + + + + + K +F Sbjct: 1 MKRYFIILVSVLLIITVFLGGCTQKPPKQQETQTTATKEINPSDLKFITVVKSTAFNWFK 60 Query: 44 SGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALK 103 G Q+ K+ GV GP++ + Q+Q++ + + Q +A++V P+ L PALK Sbjct: 61 RMETGIQEFSKDTGVKAVMQGPSKADAALQLQVVEDAIAQKPDALLVVPFKPETLEPALK 120 Query: 104 RAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPT 163 +A+++G+ V+T ++ + + +Y + A G L+D A+++N + K F S T Sbjct: 121 KALEQGIVVITHEA-SNAQNVTYDVEAFDNAAYGRHLMDELAKRMNYE-GKYVVFVGSLT 178 Query: 164 VTDQNQWVKEAKAKIAKEHPGWEIVTTQF-GYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 T N+WV A A +++P + + T++ +D K+ Q + +LK + D+ + A Sbjct: 179 STTHNEWVDAAIAWQKEKYPKMQFIGTKYETNDDVQKAYQIMKDLLKTHPDIKGVQGSSA 238 Query: 223 NALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 + A QA E K+A+VG S P+ ++ G + WD + G VA Sbjct: 239 VDVVGAGQAIEEAGLAGKIAVVGTSIPSYAGDLLKSGAISLISCWDPAKAGYAMNKVALM 298 Query: 282 LLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 +L+ ++ G L + G ++++ ++ + +K+N+ +Y F Sbjct: 299 VLQGQKIEDGMDLGVPGYEKIKL-------------VGKVIYGSAWIDIDKDNMDQYPF 344 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 100/306 (32%), Gaps = 9/306 (2%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQV 74 A + + I F+ + + + NGA+ + GV + G S Q+ Sbjct: 60 SSAEAASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQL 119 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI----NQ 130 +I N + + I++ S DGL AL + + G+ ++ D+ E + Sbjct: 120 GIIENMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDIPFY 179 Query: 131 GTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 GT G L + + K A T+ +V Sbjct: 180 GTNNYEGAKLAGEYVAKNFEKGTKTAILKGIEGQTNAADRYNGFIEGAGDT---VTVVAE 236 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPN 249 Q + + A+ I+ A D++ + N A +A + +++ I+GF + Sbjct: 237 QTANWEVDQGYTAAQNIISANPDVELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAVS 296 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 VE G + GK+ V + G ++ + + + V Sbjct: 297 EALNLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGGEAESYIDTGTEVITKDNVGEFKD 356 Query: 310 QGYDYE 315 +E Sbjct: 357 YLKTFE 362 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 117/319 (36%), Gaps = 15/319 (4%) Query: 2 TLHRFKKIALLSALGIAAI---SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-- 56 H + AL + L + A+ ++ Q +I F + + + G ++ E Sbjct: 4 RRHFLRTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYP 63 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 VD+ S QV + + + QG +++S ++ L P +K AM G++V+T D Sbjct: 64 DVDLIVTD-GNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLD 122 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 ++ G G+ + K + + + K Sbjct: 123 RKVNTP---VTVHVGGENLPLGVGAGEFLAKKLNGKGNIIELQGTAGASATIDRNKGFAE 179 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAY--SDLDAIIAPDANALPAAAQAAEN 234 IAK HP ++V +Q K+++ E +++ + + A+ A + A Q E Sbjct: 180 AIAK-HPDMKVVASQNCDYTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEA 238 Query: 235 LKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 ++VA+VG V++G + ++ V + A + K + Sbjct: 239 AGRLNEVAVVGIDGQETAFEAVKQGKLAATFVYPFV--APEGIETAYKVAKGEEVPETIT 296 Query: 294 LDIKGVGQVEVSPNSVQGY 312 L V ++ +G+ Sbjct: 297 LPTVSVTPDNIADMIGKGF 315 >UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Firmicutes RepID=C8WV69_ALIAD Length = 349 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 17/297 (5%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 E + L G+ ++ G Q A K+LGV + G + ++ +V + + + Sbjct: 56 ETYYMVTFLSGIEYWKGCFAGMQAAAKDLGVKAVFTGAPQYDINQEVTTMQQVIAKHPAG 115 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 I+V++++ + P + +A+ G+ V+++DSD R Y+ GT G Q Sbjct: 116 ILVTSINAQAMTPVINQAIAAGIPVISFDSDAPQSKRYAYL--GTSNIEAGQKAADYLGQ 173 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 +VA +P + +Q V+ K ++A ++PG ++V Q G +D K+ Q + Sbjct: 174 ALGGHGEVAVIT-TPGELNLDQRVQGFKDEMAAKYPGVKVVAVQNGNSDQIKTAQVTSAL 232 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L+ Y +L I +A+ AA A + V IV F T ++ G + Sbjct: 233 LQTYPNLAGIFCTEADEGTGAATAVQEAGKTGTVKIVSFDTDKATLNAIKSGQITATVAQ 292 Query: 267 DVVQQGKISVYVADALLKK-------------GSMKTGDKLDIKGVGQVEVSPNSVQ 310 G + A+ + + V + V+ Q Sbjct: 293 GTWNMGFWGLMDLFAIHHNLVHPVANWQQSGVDPVPPEVDTGVTIVTKSNVNAYLQQ 349 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 113/301 (37%), Gaps = 6/301 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLI 77 + + + ++ + +GAQ+A +G ++ + GP + GQV L+ Sbjct: 42 SAADAPDDKLTFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLM 101 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 N +N +AI+++ + D L +++AM G+ V+ DS + + +I T G Sbjct: 102 ENLINSKVDAILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYTSFI--ATDNVAG 159 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + + +V + + + + A+ A G ++ Q D Sbjct: 160 GRMAMERLIESIGGSGEVVVVNALAGIPSNDARGQGAEEY-AATVDGITVLPQQHCL-DQ 217 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVE 256 +++ E ++ +L I A AAQA + ++ +V F +E Sbjct: 218 AEAMTATENVIIGNPNLKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKLLE 277 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 GT+ + + GKI + A L + ++ + ++ ++ Y Sbjct: 278 DGTIDALVVQQPYEMGKIGIEYAVKALNGEEVPKTVAPEVVIATKDNMNDEAIHKVLYPK 337 Query: 317 D 317 Sbjct: 338 G 338 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 105/307 (34%), Gaps = 9/307 (2%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKL--VGVGFFTSGGNGAQQAGKELGVDVTYD 63 K + L A +A I + A+ + K G F+ S GA++ ELGV + Sbjct: 1 MKLVKLFLASSLAIIIGTLAFADTVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVVL 60 Query: 64 G-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 P E V Q+ + + + +G AI ++ P+ L ++ A G+ V+ D+ + Sbjct: 61 SPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTKGINK 120 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182 + GT + G + + VA T + A A + Sbjct: 121 GVT---FIGTDNKAGAKMAADFICDRVSRGSDVAILQGIITQSTGKARADGAHAGLKGC- 176 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVA 241 G IV Q D + E IL L A+ A + N A +A ++ + V Sbjct: 177 -GLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKDADMLNDVI 235 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 +VGF + G + G V A L K S+ V + Sbjct: 236 VVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKGRSLPPVVDTGTLLVTK 295 Query: 302 VEVSPNS 308 + Sbjct: 296 KNAADFK 302 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 5/280 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPS-VSGQVQLI 77 A S+ +I +I K + + G + AGK +G PT V QVQL+ Sbjct: 71 ATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQAPTTADSVEEQVQLM 130 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 N + Q +AIIV +G+ +++A GV VLT + + ++ G Sbjct: 131 ENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPAAED---TFLRTGVDYYES 187 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + A K K ++ + + +++ + G EIV +Q Sbjct: 188 GYTMAKAVADKLGGKGKFIILEGPAGASNAIERLNGINTGLSE-YEGIEIVASQTANFKR 246 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 T+ + E +++ Y+D+DA+IA + + A QA V + GF V+ Sbjct: 247 TEGMSVTENLIQQYTDIDAVIACNDESALGAVQALTAANMSDVLVCGFDGSVDATNAVKE 306 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 GT+ D G ++ A L + G + Sbjct: 307 GTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPFP 346 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 114/296 (38%), Gaps = 4/296 (1%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNF 80 Q I + K F+ + +GA+QA K+L V VT++GP TE V Q+ ++ Sbjct: 22 AQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAAA 81 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + + AI +A+ P LK+A + V+ +DS + T + L Sbjct: 82 LAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIP--VTTTTTDNKAAAAL 139 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 ++ +VA T +I +P +IV+ Q+G D KS Sbjct: 140 AADKMAEMIGKSGEVALVVHDQTSRTGVDRRDGFVNRIKSAYPNIKIVSVQYGGGDQLKS 199 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGT 259 + + IL+A +L I + + + +K KV I+G+ + + + G+ Sbjct: 200 TEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDSGKQQKNAIMDGS 259 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 + + V G +V +A +K + + ++ + Y+ Sbjct: 260 MAGAITQNPVGMGYKTVEMAVKAIKGEKLPKVVDTGFFWYDKTNIADPKIASVLYD 315 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 112/281 (39%), Gaps = 3/281 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 + I + ++ GA++AGK V++ Y GP SV QV+L+ + + Sbjct: 53 PHVILISQEFDNPYWRKIEQGAKEAGKNYDVNIEYIGPLRTSVDEQVKLLEKAIASRVDG 112 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 IIV + + P + +A+ R + V+T D+D R Y+ GT G L+ A Sbjct: 113 IIVQNLKDEAFIPLIDKAISRNIPVITIDADAPKSRRIAYV--GTNNFEAGQLLGKAVVS 170 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 + + ++ + T +Q ++ + IA+ HP ++V+ ++ AE + Sbjct: 171 RVEGERELGVMIGTDTSENQRLRLQGFLSVIAE-HPRLKVVSVASSNISRIQASIQAEQM 229 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 L+ + + ++ A A +NL + I GF +++G + + Sbjct: 230 LRKHPHISVMVGTSALDAIGIRMATKNLHRQDIQIFGFDDVEETIEAIQQGDIVATVVQK 289 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 G +V + L ++ I+ + + V Sbjct: 290 PYDMGYSAVKLMVEHLSGKQIQKEHFTAIEVIDRQNVQQER 330 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 112/304 (36%), Gaps = 8/304 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + F +L L + I +I + + FF + +GA++ ++LG D+ Sbjct: 3 INKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGYDL 62 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 ++ + + + + + G A++++ D + ++ A + + V+T D Sbjct: 63 VVLD-SQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQAN 121 Query: 121 PECRSYYINQGTPAQLGGMLVDMA-ARQVNKDKA--KVAFFYSSPTVTDQNQWVKEAKAK 177 + +I + GG + + +K V P + + Sbjct: 122 GGKITSHI--ASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHNI 179 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 + K + ++ Q D K LQ E I++A ++ + A + A +A + Sbjct: 180 MDKND-KFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVKAIKASGI 238 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + ++GF + + ++ + G + V +A+ + K S+K D+K Sbjct: 239 NA-LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIKNKIAADLK 297 Query: 298 GVGQ 301 + Sbjct: 298 VYTK 301 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 113/312 (36%), Gaps = 7/312 (2%) Query: 1 MTLHRFKKIALLSAL--GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG- 57 M L I L+S G A ++ F T +G ++A ++ G Sbjct: 10 MGLVSMLSIFLISCSQKGDTADGGQGGKKIKVGVSIANFDDTFLTYMMDGMKKAAEKEGD 69 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 +++ + E ++ Q+ + NFV QG + IIV V P A+ G +++ + Sbjct: 70 IELEFVDAKE-DIAKQMNQVENFVTQGKDVIIVVPVDTSAADPMTNAAVTNGTKIVYVNR 128 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + Y G+ + G++ + K + + + + Sbjct: 129 NPGNLPDGAY-YVGSEEKKAGIMQMEYLAEKMGGKGNIVILMGKLDNEGTIKRTEGVEE- 186 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENLK 236 IAK++P +I+ Q G T + E L Y + ++AI++ + + A QA ++ Sbjct: 187 IAKKYPDIKILDKQTGLWQRTDGMAKTENWLNKYGNEINAIVSNNDDMALGAVQALKDSG 246 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 + ++G + G + D QG +V VA ++ + Sbjct: 247 KTGIFVIGVDATPDGLAALAAGDISATVFQDADGQGGGAVEVAKKAANGETVVKETWVPF 306 Query: 297 KGVGQVEVSPNS 308 K V ++ Sbjct: 307 KLVTPENINEFK 318 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 8/282 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + I F+ ++A + GV++ ++ Q+ + +F+ Sbjct: 24 ALADDITIGASLLTQQHPFYVQLKQAMEKAADDNGVELIVSI-ANQDLNKQISDVEDFIV 82 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 +G +AI++S V G+ A+ +A + G+ V+T D E + T GG + Sbjct: 83 RGVDAIVLSPVDSKGVVGAIIKAKRAGIPVITVD--ISAEGVEVDAHVATDNYYGGRIAG 140 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 +V K +VA P V V K ++K +PG EIV Q G ++L Sbjct: 141 ETMAKVLNGKGQVAIIDY-PVVQSVRDRVAGFKEAVSK-YPGIEIVAIQPG-ITRPEALN 197 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGT-V 260 TA+ IL+A+ ++D I +A A+ A ++ D V ++GF R V++ Sbjct: 198 TAQNILQAHPEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKKEESF 257 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQV 302 + G++ + A ++K ++ + + Sbjct: 258 VAVVCQYPGEMGRLGLETALRVIKGEKVEKEIPVLPGLFTKE 299 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 5/297 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQ 75 A A + IA IPK + ++ GAQ AG + G + + G T+ + GQV+ Sbjct: 52 AAPTEAKEDAEKVIAVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVK 111 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ +F+ +G +AI++S V+PDG+ P L++A G+ V+ D + ++ T + Sbjct: 112 LVEDFIQRGVSAIVISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPRSTVS--TNDE 169 Query: 136 LGGMLVDMAARQVNKD-KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 G +++ D A + P + K ++ +P ++I+ T +G Sbjct: 170 AAGKFAAEKLKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDEL-GTYPNYKIIGTYYGK 228 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPY 254 D ++ + IL + D+ + + + V F + Sbjct: 229 GDRNQTYNITQDILTSNPDITGFYTVNEGSSAGVTLGVREGDLKEKIFVAFDPSTEVLDA 288 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + G V + G+ +V A +L +++ + + V + +Q Sbjct: 289 IRDGYVDGAVAQNPYLIGRTAVLNAIKVLNGETVEKKIDVPVTWVTIDNLDDPEIQN 345 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 127/320 (39%), Gaps = 11/320 (3%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIP----KLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 + +++ +GI + + + + + I K + F+ G + A E G +VT Sbjct: 16 ILIVVAVVGIYKWAASQRTEKTVDIIVTVKAKSSAIDFWKVLITGVEDAANEFGANVTVI 75 Query: 64 GP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP +E + Q + + + Q +AI+++A + L P ++ ++ G++++T DS + Sbjct: 76 GPPSETEIDTQTEQLKQAIRQKPDAIVMAATDYNRLVPVAQQIVKAGIKLITVDSRINSD 135 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKA--KVAFFYSSPTVTDQNQWVKEAKAKIAK 180 +I T G ++ + + KVA + Q + K + + + Sbjct: 136 DALSFI--ATDNIAAGEKAGEEMAKLLPESSSSKVAIMSYVYGTSSQLEREKGVRQWL-E 192 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDK 239 H E+ +T + K+ + + +L + I+ + + A +A +L + K Sbjct: 193 GHSHIEVASTLYSEGRLEKAYELTKELLSEDPGIKGIVGLNEPSTVGAGRAIRDLGLSGK 252 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V +VGF + +E G ++ + G +SV A ++ + + + Sbjct: 253 VKLVGFDSSVDEVKLIEGGVLQATIVQKPYNMGYLSVKTAIEAVRGKKVPKLIDTESVII 312 Query: 300 GQVEVSPNSVQGYDYEADGN 319 + + Q + G Sbjct: 313 NKDNMYTEQNQKLLFPFVGE 332 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 115/308 (37%), Gaps = 5/308 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M L R +A + ++ +A+ IA I FF + GA+ KELG + Sbjct: 1 MKLTRRLTLAAFAGALALGTALPAFSADLIAIITPAHDNPFFKAEAVGAEAKAKELGYE- 59 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T + + Q ++I+ + +G AII+ D A+K+A G+ D + Sbjct: 60 TLLMTHDDDANKQSEMIDTAIGRGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREIN 119 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + G L ++ +K + T+ + I Sbjct: 120 ATGV-AVAQIVSNNYQGAQLGAQEFVKLMGEKGNYVELVGKESDTNAGIRSQGYHDVI-D 177 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 ++P + V Q T++ E IL+A D+ +I+ + A A + V Sbjct: 178 DYPDLKSVAKQSANWSQTEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRKDV 237 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK--LDIKG 298 +VGF N +R ++ G +K L Q +++V ADA +K + +K +D Sbjct: 238 IVVGFDGSNDVRDSIKSGGIKATVLQPAYAQAQLAVEQADAYIKNKTTPKEEKQLMDCVL 297 Query: 299 VGQVEVSP 306 + Sbjct: 298 INADNAGK 305 >UniRef50_C8SFB0 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SFB0_9RHIZ Length = 328 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 92/341 (26%), Positives = 166/341 (48%), Gaps = 14/341 (4%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M H K +A + A + + ++AF+P+L+G+ +F + G +A K+LGVD Sbjct: 1 MLSHFKKVLAASALSLAVATAAHAADKHKVAFVPQLIGIPYFNAMEAGGNRAAKDLGVDF 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 Y GP + + Q+Q++ N ++QG AI VS + + P ++ A +G+++ T DSD Sbjct: 61 IYSGPVDTNPVDQLQIVQNLIDQGVEAISVSVLDASSIAPVVESAKAKGIKLFTSDSDAP 120 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 R+ Y+ Q T LG +VD ++V +D A + T ++ N W+ + + A Sbjct: 121 DSGRAVYVAQATDEGLGTTIVDELVKRVGED-ATIGIVSGEATASNLNAWIGFMQKEAAA 179 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DK 239 ++P +++ QF A ++ Q + ++ A D+ AIIA ++ P AQA E Sbjct: 180 KYPKLKLLAPQFAGGTAERAAQISGDLMAANPDIKAIIAVASSTCPGVAQAIETAGKIGS 239 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V G+ +PN R Y++ G LWD Q G ++V+ L+ + + +K+ Sbjct: 240 VIGAGYCSPNTARAYLKSGAFGFTVLWDPEQLGYLTVWAGKQLIDGKAFEAENKI----- 294 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 ++ GI+LL +F K+N+ K++F Sbjct: 295 -------AGLEKPVTYDAAKGILLLGPPAVFTKDNVDKFNF 328 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 119/293 (40%), Gaps = 7/293 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 I++ ++ + + I + ++ GA++A ++ G+++ Y GP V +++ Sbjct: 37 ISSGNVIDKPQLHLVLISQEYDNPYWRLVQQGAREAAQQKGIELEYLGPARADVKEHIKI 96 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + + + II + + P + A + G+ ++T DSD R Y+ GT Sbjct: 97 LEMAIASKVDGIITQGLEENEFTPIINEAARMGIPIITVDSDAPHSKRVAYV--GTDNYA 154 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 G + + +A+VA S T ++Q V+ K + K +PG I+ Sbjct: 155 AGYMAGRELIAKSAGRAEVALITGSFTASNQKDRVRGFKDAV-KTYPGIHIIDIAESNIS 213 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK----NDKVAIVGFSTPNVMR 252 +S +A + + Y ++D + A AQ + + + I+ F Sbjct: 214 RIQSAASAYTLAQKYPEIDTFVGTSALDGLGIAQMLKEMGSETLKTPIRIIAFDDLPETL 273 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 + +G ++ + G+ SV + LK + T D+K + + +++ Sbjct: 274 TLINQGVIESTIVQQPFIMGRESVNLLMDYLKGEKIVTVYNTDVKVIHREDLT 326 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 108/310 (34%), Gaps = 13/310 (4%) Query: 6 FKKIALLSALGIAAI---SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 F + LL+ G + S +I + K + FF GA++ ++ + Sbjct: 28 FTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQNATRFDF 87 Query: 63 DGPT---EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 E + Q+ VN+ Y+ I+++ L + +A++ G+ V+ D Sbjct: 88 TATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVAL 147 Query: 120 KPECRSYY----INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + G + G + + KVA +P + Q Sbjct: 148 DEATKKAAGIDLAFFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFD 207 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 IA +V + G+ + ++ LK Y DL I+ + + A QA E Sbjct: 208 DAIADGS--LNLVVAESGHWETSEGQSITAAWLKKYPDLQGIMCANDSMAFGAVQALEAA 265 Query: 236 KN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 DK+ +VGF ++P ++ G + Q I + LK + Sbjct: 266 NLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFSGWIRT 325 Query: 295 DIKGVGQVEV 304 ++K + + + Sbjct: 326 ELKLITKDNL 335 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 100/301 (33%), Gaps = 9/301 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQG 84 + I F + + N QQA LG+ G SV Q+ +I N+V+QG Sbjct: 79 SKYTIGFCGMTLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTIIENYVSQG 138 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI----NQGTPAQLGGML 140 + II+ + +GL AL+ + V+ D+ GT +GG L Sbjct: 139 VDGIILVPAASEGLISALQECESANIPVINLDTKLDDSTLKTLGKDIPFYGTDNYVGGQL 198 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 V Q+ D K A T+ + K ++V Q + + Sbjct: 199 VGEEVAQMYPDGCKTAILRGVQGQTNDDDRYNGFLD---KAGDVVDLVAEQHANWETDQG 255 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGT 259 + I++A DL I + A QA + D++ I + YV G Sbjct: 256 YTAIQNIIQANKDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEGLQYVVDGK 315 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGN 319 ++ GK+ V + ++ + + + Y A+ + Sbjct: 316 FVSTCAQQPIKMGKLGVANMAKIFAGKDAESYIDTGCELITSENAKQTLEETKKYTAEIS 375 Query: 320 G 320 Sbjct: 376 P 376 >UniRef50_C4G524 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G524_ABIDE Length = 370 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 125/327 (38%), Gaps = 19/327 (5%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 A+ + A ++ I K +F G +Q K+ G++V+ P + Q+ + Sbjct: 60 TASSTSADPADYKVVMIVK-QSDSWFDDMSTGVEQLKKDTGLNVSVQVPETGDAASQISI 118 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + N + QG NAI V P+ L P +++A + G+ V+T ++ + + Sbjct: 119 MENLIAQGVNAICVVPNDPEALIPTIEKARKAGIVVVTHEAPGIAANVDLDVEAFVNEEF 178 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF--GY 194 G L + K + F T+ +W A A I++++P + +T + Sbjct: 179 -GKLFGENLAKAMGGKGEFVGFVGGLTMETHMKWYNAAIAYISEKYPEMKCLTKEPYEDG 237 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRP 253 N + ILKAY D+ A+ QA + + +V + P++ Sbjct: 238 NSVDGAYNKTLEILKAYPDIKGFFDCSAHGG-GICQALQEKGKAGDIKVVSLALPSMSAT 296 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 Y++ G++ W G + Y A L + TG L I G ++V N Sbjct: 297 YLKDGSMSHGQAWRPADAGYATCYAAYLLASGQGVSTGTDLKITGYDNIKVDGN------ 350 Query: 314 YEADGNGIVLLPERVIFNKENIGKYDF 340 I + F +NI Y F Sbjct: 351 -------IAYGNAPLEFTADNIDDYGF 370 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 107/313 (34%), Gaps = 14/313 (4%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 ++ +I F + FF G ++ KE G D+ QV N Sbjct: 60 VANAAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDL-VQTNANGDAQQQVNDAIN 118 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 ++QG A++++ + + PA+++A + V T D + + ++ LG Sbjct: 119 LLSQGVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSDGGKVTSFV-ASDNVALGQT 177 Query: 140 LVDMAARQVNK----DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 A Q+ K K V T K +IAK +P ++V Q G Sbjct: 178 AAKWIADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAK-YPDIKVVARQEGAF 236 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-------VAIVGFSTP 248 D KSL IL+ Y +DA+ + + A +A +N K + ++G Sbjct: 237 DQEKSLNAMTNILQKYPQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILVIGADGT 296 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + G + +Q S+ K + + + + ++ Sbjct: 297 AQALSAIRAGKQDATISQNPIQMAAKSLQFVADYTAKKDVPANYAWPTLLIDKSNIDSDA 356 Query: 309 VQGYDYEADGNGI 321 + Y ++ Sbjct: 357 TKKYGLWSEEVKQ 369 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 107/307 (34%), Gaps = 21/307 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMN-------------VQAAERIAFIPKLVGVGFFTSGGN 47 M + + LL + G A + IA + K + F+ Sbjct: 5 MKIFLLLTMFLLVSCGGAKEEAKTEDGNEPAKTEQKAEGQAEIAIVLKTLSNPFWVEMKE 64 Query: 48 GAQQAGKELGVDV-TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 G ++ G+ V +E V Q++LI N +++GY AI ++ +SP PA+ A Sbjct: 65 GIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKAIGIAPLSPVNTIPAIVEAN 124 Query: 107 QRGVRVLTWDSDTK-----PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS 161 ++G+ V+ D S T G + +VA Sbjct: 125 KKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKGAEYIIGKLPEGGEVAIIEGK 184 Query: 162 PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 + A + +++V +Q D +K+L A +++ Y +L AI A + Sbjct: 185 SGNASGEFRRQGATEAFKAD-SKFKLVASQPADWDRSKALDVAANLIQKYPNLKAIYACN 243 Query: 222 ANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 A QA N ++ +VG R ++ G + D G S+ + Sbjct: 244 DTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKLNATVAQDPAMIGATSLKILI 303 Query: 281 ALLKKGS 287 +K Sbjct: 304 EAIKDKP 310 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 105/301 (34%), Gaps = 5/301 (1%) Query: 11 LLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSV 70 L A+ + S A+ RI V F T +G ++A ++ V + ++ + V Sbjct: 6 LFIAVLLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQFED-AQGDV 64 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-RSYYIN 129 Q+ + F++Q +A+IV V + A++ + ++ + Sbjct: 65 VRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGVTT 124 Query: 130 QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189 + G L + K +A + + K + K++PG IV Sbjct: 125 VASNDIEAGQLQMRYLAEKMGGKGTIALIMGDLAQNSTHDRSEGVKQVL-KDYPGITIVE 183 Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFST 247 Q K + L A DAI+A + AA A + +VAIVG Sbjct: 184 QQTAEWQRNKGMDLTSNWLLAGRTFDAIVANNDEMAIGAAMALQQAGKAKGEVAIVGIDG 243 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 ++RG + D Q ++ A ++K + + + + +V+ Sbjct: 244 LPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEVWVPFQLITPEQVAVF 303 Query: 308 S 308 Sbjct: 304 E 304 >UniRef50_C8NFA1 AI2 transporter n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFA1_9LACT Length = 373 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 12/334 (3%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A + ++ FIPK+ G FF SG GAQ+ K+ G V Y+G SV+ QV +IN Sbjct: 40 ATTQTANNGGKVVFIPKVTGNSFFESGNLGAQEMAKKEGFTVDYNGNPVASVANQVTIIN 99 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 N V G +I VS+V P GL ALK+A + G++V+TWDSD P+ RS ++QGTP QLG Sbjct: 100 NAVQTGAGSIAVSSVDPTGLDNALKQAQKAGLKVVTWDSDVSPDARSLMVSQGTPTQLGE 159 Query: 139 MLVDMAARQV-------NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT- 190 MLV M+ + KDK K A+ YSS TV DQN W K + I K +P WE V Sbjct: 160 MLVKMSVDALEKRGKDPKKDKIKYAWHYSSSTVQDQNSWQKVGEEYIKKNYPNWENVNES 219 Query: 191 -QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFST 247 + DA ++L + IL A+ D+D II D+ ALP QA +N K + + GFST Sbjct: 220 NYYSNQDAQQALNVGQSILSAHKDIDLIICNDSTALPGQLQAVQNAKLTKKDITVTGFST 279 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 PN ++ Y + ++E+GLWDV QG ++VY+A+ L K GDK+++ G+G+VEV N Sbjct: 280 PNSIKKYAKDDIIEEWGLWDVKVQGALAVYLANYLASGNQAKVGDKINVPGIGEVEVQNN 339 Query: 308 SVQGYDYE-ADGNGIVLLPERVIFNKENIGKYDF 340 S+ +Y+ + +G+VLLPER IF KEN+ KYDF Sbjct: 340 SILDPNYKDSPDSGVVLLPERTIFTKENMDKYDF 373 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 7/287 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 + I + F + + + KE+GV++ E S QV+ + +F+ Sbjct: 27 SGGDNLVIGATMLSMQNEFIVNVSDAMEAKAKEMGVELITVD-AERSALKQVEQVESFIG 85 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 QG +AII++ + PA+K AM + ++ +S+T + + G+ + Sbjct: 86 QGVDAIIMNPAEVEASSPAIKLAMDAKIPIINVNSETSAKPTA---FVGSDDTESARIAM 142 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 + K + + Q + AK + PG +++ Q G D K + Sbjct: 143 KYIAEKLGGKGNILMMHGFMGQAAQIKRDNGAKDILKAN-PGLKLLAEQSGEWDRAKGMS 201 Query: 203 TAEGILKAYSD-LDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTV 260 E +++Y D ++AI A + A +A E KV +V V++GT+ Sbjct: 202 LTENWIQSYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTL 261 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 + +QG ++ A KK + + + + V + V Sbjct: 262 DATVFQNAKEQGGKAIETAVKAAKKEAFEKEVLIPFQLVDKGNVEGF 308 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 120/339 (35%), Gaps = 29/339 (8%) Query: 1 MTLHRFKKIALLSALGIAAISM------------------------NVQAAERIAFIPKL 36 M R +I L L + + Q + +I F Sbjct: 10 MKKKRALRILSLILLCALTFTACKKNVGTPEDNAASKDENTEEKDKDEQESWKIGFSGID 69 Query: 37 VGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPD 96 + +F + + ++ ++ P + Q I +++G NAII+S V + Sbjct: 70 MENPYFLTLESAIKEEVDGKNCELIVKDP-KTDPDMQASQIQEMIDEGINAIILSPVDWE 128 Query: 97 GLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVA 156 + P+L+ + V+++ D+ K G+ G+L + D KVA Sbjct: 129 KITPSLEALKEADVKIVNVDTQVKEMDY-VDAYIGSDNYNAGVLCGEDLIKRCPDGGKVA 187 Query: 157 FFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDA 216 PT N+ + + +AK G+EIV + + KSL+ A+ IL SD+ A Sbjct: 188 ILEC-PTQNSVNERITGFEETLAKAENGFEIVAREDTSGEFQKSLEAAQKILSENSDIVA 246 Query: 217 IIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE--RGTVKEFGLWDVVQQGKI 274 I+ + A A + ++ I G ++ ++ + + GK Sbjct: 247 IMCGNDQMAVGAKTAMNVAEQGQILIYGVDGSPDIKKELKKTENQIAGTVAQSPISMGKD 306 Query: 275 SVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 + +L + K ++ + Q V V G+ Sbjct: 307 AANTVLNILNGKDYEKEIKENVFMINQENVDMYGVDGWQ 345 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 102/307 (33%), Gaps = 6/307 (1%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 KK+AL A +I + F T+ NG + A K+ VDV + Sbjct: 1 MKKLALSVLASAMFAGSVAAADLKIGVSMAVFDDNFLTALRNGIETAAKDKSVDVQIED- 59 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR- 124 + V Q+ I NF+ G +AIIV+ V D A G+ ++ + + Sbjct: 60 GKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQPINVNQL 119 Query: 125 -SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEH 182 + ++ G L ++ K V + Q K+ I KE Sbjct: 120 PDNQAFVASNEEVSGTLQTEEVCRLLGGKGNVVVMMGELSNQAAIQRTKDIHDVIKRKEC 179 Query: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DKV 240 G ++V Q K L A + DA+I+ + A QA + D V Sbjct: 180 SGMKVVAEQTAEWSRLKGNDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKASGRKMDSV 239 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 + G ++ G + QG +V A L K ++ + + V Sbjct: 240 VVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQKVWVPFELVT 299 Query: 301 QVEVSPN 307 + Sbjct: 300 PANLDKY 306 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 10/291 (3%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGY 85 RIA +PK F+ S GA +A +EL VDV + GP E + QV ++++FV QG Sbjct: 40 RLRIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGV 99 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 + I+++ + L ++ A Q + V+ +DSD + ++ T + G L Sbjct: 100 SGIVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDHVSFV--ATDNEAAGRLAGEHL 157 Query: 146 RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT-QFGYNDATKSLQTA 204 + + KV K + PG + + Q+G + + Sbjct: 158 GKAIGEDGKVVVLRYQEGSASTQHREKGFLDAVRA-MPGVTVASENQYGGATTESAFHKS 216 Query: 205 EGIL----KAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGT 259 E +L A + + P+ + QA KV VGF + + G Sbjct: 217 ESLLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALREGD 276 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 ++ + + G ++V A L + + V + ++ +VQ Sbjct: 277 IEALVVQNPFNMGYVAVKTMVAHLHGEKVAARIDTGSRVVTRQDLDDPAVQ 327 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 116/317 (36%), Gaps = 7/317 (2%) Query: 4 HRFKKIALLSALGIAAISMNVQ--AAERIAFIPKLVGVGFFTSGGNGAQQA-GKELGVDV 60 +++ + + AA+++ A IA I K ++ + GA A K + Sbjct: 21 SNMRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVRKGAADAVAKVENYTM 80 Query: 61 TYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 T+ GP +E +V+ QV ++ + V Q AI+++ PD L P++++A + + V+ DS Sbjct: 81 TFQGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLIDSMI 140 Query: 120 KPECRSYY-INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 YY T + G + KVA P V + V + I Sbjct: 141 SDSGAKYYQSFLATDNEAAGEALGKEMVDHVGQTGKVAIMSYVPGVGSEIGRVGGFRKYI 200 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN- 237 A+ H +IV + + ++ +L + DL I A + +A + Sbjct: 201 AE-HSHIQIVGPFYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGVGRAIQQAGKS 259 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 K+ + F + +V GT + + G V A +L + Sbjct: 260 GKLYAIAFDGNEDEQGFVRSGTFQLLAVQGSYAMGAKGVETAIGVLTGAKPTKYVNTGVV 319 Query: 298 GVGQVEVSPNSVQGYDY 314 V + + Y Sbjct: 320 FVTSANLDSPEAKQVLY 336 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 17/313 (5%) Query: 6 FKKIALLSALGIAAIS------MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 I +L+ + S + + I + FF G ++ KELGV Sbjct: 14 ILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDIDEGIKEKAKELGVK 73 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 V + P + V+ Q I +F+ Q + +IV + PA++ A ++ + V+T D+ Sbjct: 74 VIVNDPDQ-DVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFEK-MPVVTVDAVL 131 Query: 120 KPECRSYYINQGTPAQLGGMLVDMA----ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 E + Y+ + G + + K+++A Q Q + K Sbjct: 132 NTENITSYVGTVS--YDAGKKLGEYTKKYIDEKLGGKSEIAIVT-DLKSQIQMQRIDGFK 188 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 + +I+ +Q G D +SL T E ++++ D+D I A N++ A A E+ Sbjct: 189 DALKGSA-NVKILNSQPG-YDREESLNTVENLIQSNPDVDIIYATAENSVLGAKAALESA 246 Query: 236 KNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 KN V IVGF + GT+ + G+++V +K ++ + Sbjct: 247 KNKDVKIVGFDLTEEASSGITDGTILAMIQQQPKEMGRLAVEAVVKAIKGEKVEKNIPVP 306 Query: 296 IKGVGQVEVSPNS 308 + + Sbjct: 307 ALLYDKENIKDFK 319 >UniRef50_C0C5N5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5N5_9CLOT Length = 353 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 134/368 (36%), Gaps = 43/368 (11%) Query: 1 MTLHRFKKIAL----LSALGIAAISMNVQAA----------------------ERIAFIP 34 M + + + L +A+ S + + ++ + Sbjct: 1 MKMKKLVSVLLCIMLAAAMVTGCGSSDAGSGTGDKKTKETKETGEEKTADPEEYQVVMVV 60 Query: 35 KLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVS 94 K +F G +Q K+ G++V+ P + Q+ ++ + + QG +AI V Sbjct: 61 K-QSDSWFDDMATGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGVDAICVVPND 119 Query: 95 PDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAK 154 P+ L P +++A + G+ V+T ++ + + G L K K Sbjct: 120 PEALVPTIEKARESGIVVVTHEAPGIAGDVDLDVEAFVNEEF-GQLFGEKLASAMDGKGK 178 Query: 155 VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF--GYNDATKSLQTAEGILKAYS 212 A F T+ W K A A I + +P E V+ + N + A ILKAY Sbjct: 179 YAGFVGGLTMETHMAWYKAAVAYIEENYPDMECVSKEPYEDGNSIDGAHDKALEILKAYP 238 Query: 213 DLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQG 272 D+ A E K D + +V + P++ Y+E G++ W G Sbjct: 239 DIKGFFDCSAQGGGICETLQEKNKTDDIKVVSLALPSMSATYLEDGSMAAGLAWRPADAG 298 Query: 273 KISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNK 332 + Y A L ++TG L I G ++EV G+ + F+ Sbjct: 299 YATCYAAYLLASGQKVETGTDLKITGYEEMEVKD-------------GVAYGNAPLEFSS 345 Query: 333 ENIGKYDF 340 +NI Y+F Sbjct: 346 DNINDYNF 353 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 113/306 (36%), Gaps = 10/306 (3%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQ---QAGKELGVDVTY---DGPTEPSVS 71 V+ ++ + K ++ + G + Q KE G ++T E Sbjct: 61 LGAMPKVEGEIKLGSVAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQ 120 Query: 72 GQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQG 131 GQ+ ++ + +N+ Y A+++S +S L P +++A + + V+ + ++ I G Sbjct: 121 GQLSIVEDMINKKYTALLLSPISDGNLVPGVEKAKKNNIPVINVNDGII---KNADIFVG 177 Query: 132 TPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQ 191 A + G L + + +VA P Q + + G +IV Q Sbjct: 178 PKAIMNGELAAEWISKKIGGEGEVAIVIGMPKAFAARQRTLGFENWMKSNAAGVKIVEKQ 237 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVM 251 D K+ AE +K Y +L AI + +A K D + +VG Sbjct: 238 NADWDRAKAKDLAEIWIKKYPNLKAIFCNNDVMALGVQEAVNASKRD-ILVVGVDGIKEA 296 Query: 252 RPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + +G + + +G+I+V +A L + + V+ S + Sbjct: 297 YESIRKGEMDATVDSFPLYKGQIAVEMALRSLGGQQLPRVIWTPQALIDSTNVNEPSEKI 356 Query: 312 YDYEAD 317 +++ Sbjct: 357 INWKEP 362 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 99/289 (34%), Gaps = 7/289 (2%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY-DGPTEPSVSGQVQLINNFV 81 A +IA + K + FF GA++A KELG+D+ E S+ Q+Q+I + + Sbjct: 44 AAPNARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLI 103 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY-----YINQGTPAQL 136 ++AI+++ L P LK A + G+R++ D+ E + Sbjct: 104 RMKFDAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDNEK 163 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + A+ A + + Q A+ + P +V + Sbjct: 164 AAYESAGFIAREIHKPAQAAILEGIRSADNSRQRRVGAERAFREN-PLIRLVARESANWK 222 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE 256 + + + D+ + + A Q + V + + + + Sbjct: 223 IDEGRDVTRRLFSDHPDITLLFCANDMMALGAIQFLQESGRYGVKVAAYDALEEAKRAIL 282 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 G ++ +QG + +A +L ++ ++ V + Sbjct: 283 SGRMEVTVNQQAAEQGYQGIILASRVLNGEAVPEVVLVETSLVTLESLK 331 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 103/324 (31%), Gaps = 9/324 (2%) Query: 1 MTLHRFKKIAL-LSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 MT R+ + L + A I + + + ++ D Sbjct: 1 MTFRRYHILFLYFALFACLACQRERNPRYVIGVS-QCSEDLWRQTMNEELKREVALYQAD 59 Query: 60 VTYDG-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + Q+ I F+ Q + ++VS + P +++A Q+G+ V+ D Sbjct: 60 AEVLIRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRK 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 E + Y+ G G + A V K K +A + T + K + Sbjct: 120 IATESYTAYV--GANNYQIGKEAGLYAIGVLKGKGNIAEVRGTKGSTSDAERHKGFVDAL 177 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND 238 K P +IV +G + + I + + +D + A + +AA Sbjct: 178 -KNAPEVQIVAETWGNFLQADAKTQMQQIFQEHPHIDLVFAMNDPMAAGTHEAAMQFNGK 236 Query: 239 KVAIVGFSTPNV-MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 I+G +E ++ G+ + +A +L K + + L+ Sbjct: 237 IPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAMKILHKQPFQRENILNTT 294 Query: 298 GVGQVEVSPNSVQGYDYEADGNGI 321 V + V +Q I Sbjct: 295 VVDKSNVRILQLQTEQIAEKQTKI 318 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 128/329 (38%), Gaps = 18/329 (5%) Query: 2 TLHRFKKIAL-------LSALGIAAISMNVQAA------ERIAFIPKLVGVGFFTSGGNG 48 FK +AL L+A G + S + ++A ++I + K F+ S G Sbjct: 1 MRTSFKVLALGAIACLSLTACGSSPASSDGKSADAKSNSKKIILVSKGFQHTFWQSVKKG 60 Query: 49 AQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 A + GKELG +V + GP E +V+ Q+ + N +N AI ++A+ P L++ Sbjct: 61 ALEKGKELGYEVEFIGPKNETAVTEQLDQLKNALNAKPAAIGLAALDSKAAEPILQQIKN 120 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 G+ V+ +DS + + T + G Q+ +K V T Sbjct: 121 AGIPVIAFDSGVDSDIPLTTVQ--TDNRTAGAKAAEKLAQLMGNKGTVGIVCHGQATTTG 178 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 + + + P +++ Q+ + K+ A+ I+K+ +D+ A+ + Sbjct: 179 KGRCFGFQDWMKEHAPDIKLLQEQWAD-ERGKAADAAKAIVKSNTDVTAMYGSNEVTAAG 237 Query: 228 AAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG 286 Q + ++ IVGF + ++ G V+ G +V AD +K Sbjct: 238 VLQGVKEAGKMGQITIVGFDSGKAQIDAIKSGDEAGAITQAPVKMGAETVAAADKAIKGE 297 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 S++ + + +Q YE Sbjct: 298 SLEKIIDSGFAWYDKSNIDTPEIQSNIYE 326 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 107/289 (37%), Gaps = 7/289 (2%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 + I + F T G ++ +ELG D+ + Q+ I N Sbjct: 38 ASKKDGGYTIGCTVYYMT-EFVTLMTEGMEKKAEELGCDLVMLDAQQ-DAQNQITQIENL 95 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + Q + IIV+AV D + PA++ G+ ++ + E +Y+ G L G L Sbjct: 96 IAQKVDVIIVAAVDSDAILPAIEMCDDAGIPLVGVNMLFNTEEPYHYV--GPDDVLAGEL 153 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 A + V + Q Q ++ + + K ++ Q ++ Sbjct: 154 EMQNAIDEIGGEGNVVILEGPIGQSAQIQRLEGNQNILDKYEGKINVLADQTANWSREEA 213 Query: 201 LQTAEGILKAYS-DLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERG 258 L E L+ +S +DAI+A + A QA E DK+ + G V+ G Sbjct: 214 LTLVENWLETFSGKIDAIVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDG 273 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD-KLDIKGVGQVEVSP 306 T+ D +G +V A +L+ + +D+K + + V Sbjct: 274 TLLGTVYQDAGLEGSEAVQKAYDVLEGKVTEKELSYIDMKWITKDNVDE 322 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 104/291 (35%), Gaps = 7/291 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDVTYDGPTEPSVSGQVQ 75 + S + IA++ + V F+ +G + K GV VT + + + Q+ Sbjct: 44 SGASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKD-NANTQLA 102 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + + + + I++S L A + G+ V+ D T +I+ T Sbjct: 103 NVQDAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTDSGEYVSFIS--TDNS 160 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + ++A + + + + I ++ E+ Q Sbjct: 161 GGAKKLGEYVADKLNKGDEIAQIALNQARKNGVLRKEGFEEGIKEKLK--EVDFRQMEKV 218 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 + + ++ + ++ +Y +L I + A A + + NDK IVGF + + Sbjct: 219 NRDEGVRYTQDLITSYPNLKCIFCHSEDPSMGAVTALKEINNDKCKIVGFDCSPEVVEAI 278 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + G + V G+ +V L G+ + +D V Q ++ Sbjct: 279 KSGDILATAAQQPVFMGRTAVDCLKTHLDGGTPEKEISVDTLLVTQDNIND 329 >UniRef50_B0NES6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NES6_EUBSP Length = 350 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 135/355 (38%), Gaps = 36/355 (10%) Query: 6 FKKIALLSALGIAAISMNVQAA-----------------ERIAFIPKLVGVGFFTSGGNG 48 L + G + ++ ++ I K +F G Sbjct: 12 MMIAVLAAGCGSSDAGSGGKSDSSKTKDTGDDKTANPEEYQVVMIVK-QSDSWFDDMTTG 70 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 +Q K+ G++V+ P + Q+ ++ + + QG +AI + PD L P +++A + Sbjct: 71 VEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGVDAICIVPNDPDALVPTIEKAKES 130 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 G+ V+T ++ E + + G + + A+ + K + A F T+ Sbjct: 131 GIVVVTHEAPGIAENVDLDVEAFVNEEFGKLFGEKLAKSM-DGKGQYAGFVGGLTMETHM 189 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQF--GYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 W K A I + +P E VT + N + ILKAY D+ + A+ Sbjct: 190 AWYKAAIEYIKENYPDMECVTEEPYEDGNSVDGAHDKTLEILKAYPDIKGLFDCSAHGG- 248 Query: 227 AAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKK 285 +A + D V++V + P++ Y+E G++K W G + Y A L Sbjct: 249 GICEALQEKNKTDDVSVVSLALPSMSATYLEDGSMKAGLAWRPADAGYATCYAAYLLASG 308 Query: 286 GSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 ++TG L I G ++V G+ + F+ +NI Y F Sbjct: 309 QKVETGTDLKITGYEDIQVKD-------------GVAYGNAPLEFSADNINDYKF 350 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 110/304 (36%), Gaps = 8/304 (2%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDV 60 L R + + + L +A A R+ + Q+ +++ GV + Sbjct: 10 LSRTRAVLFATVLCLAG--STALADLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTL 66 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + V Q+ + +F+ Q +AIIV+ +RA + G+ ++ +S + Sbjct: 67 QVEDSG-SDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNSRPE 125 Query: 121 P-ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 E + + GT + G + + K +A D + K +A Sbjct: 126 VREFPAGVVFVGTDERRLGQMQMEYLAEKMGGKGDLAILLGRLAHDDTRKRTAGVKDVLA 185 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 +P +V Q G K L L + + DA++A + AA A + Sbjct: 186 -RYPQIRVVEEQSGDWQRDKGLDLTNNWLSSGREFDAVVANNDEMGIGAAMALRQAGRRE 244 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V++ G + RG + L D V G+ +V VA L++K ++ + + + Sbjct: 245 VSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRKDVVQGDVWIPVHLI 304 Query: 300 GQVE 303 Sbjct: 305 TPDN 308 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 107/290 (36%), Gaps = 5/290 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A + I + + F T + K E Q ++ Sbjct: 37 ADTEAAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYDNVKLIINDAESQSDKQASQLD 96 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 +FV QG +A+I+S V D L A+K + G+ V+T +D + + G+ + GG Sbjct: 97 SFVAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQ--VWVGSSNENGG 154 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + + K K+A + + K++P EIV Q G Sbjct: 155 EIEMKYVAEKLGGKGKIAVLRGPLGAFAEQGRFAGY-ETVLKDYPDIEIVFDQTGNWQRE 213 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVER 257 +++ E +L A ++LDAI+ + A +A + D++ I G ++ Sbjct: 214 EAMALIENLLTAGTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSIKA 273 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 G + D + QG ++ +A + +++ + + V + V Sbjct: 274 GELDATCFQDAIGQGTNALDMAVKAARGETVER-MDIPFELVTKDNVDGY 322 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 13/316 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAE----RIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 L + ALL+ A+ MN A + RIA IPK+ V FF NGA+ A +LG Sbjct: 19 KLPPLFQFALLAIPLTLAVQMNATAKDVKDLRIAVIPKVA-VPFFDDCNNGAKAAADKLG 77 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 V + P S QV+++ + +++ + I +S P + A+K+A+ G++V+T+DS Sbjct: 78 VQYQWVVPQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVTFDS 137 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 D+ RS YI GT G + + + + +VA + N+ + K Sbjct: 138 DSANSGRSMYI--GTINSAAGETMGESMAKAIDGEGEVAILTGQLGAANLNERITGIKKS 195 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA--AQAAENL 235 ++K +P ++V T+ +D K++ T E + + + L I PA A + Sbjct: 196 LSK-YPKIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVSKVMATKEF 254 Query: 236 KNDK--VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM-KTGD 292 + K V + F V+ G ++ + V GK++V + Sbjct: 255 GSKKGAVKVFAFDDLPDTVKGVKEGYIQGIMVQRPVTMGKLAVEHLVDQITGKEPAPKDV 314 Query: 293 KLDIKGVGQVEVSPNS 308 + V + + Sbjct: 315 DTGVNVVTSQNLGSYT 330 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 107/292 (36%), Gaps = 5/292 (1%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 S + + F N A++ ELGV++ + Q+ + Sbjct: 46 TSKPADKKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIYD-GNYDPNTQINQVET 104 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 ++ G +AII++ A+ +A + V+ ++ E + Y+ G Sbjct: 105 MISDGVDAIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLTSYVGSKD--VYAGE 162 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 L A K + + Q + + + + K +P +++ + ++ Sbjct: 163 LEMQAIADKIGGKGNIVILDGPLGQSAQLERSEGIQNVLKK-YPDIKVLAEKTANWSRSE 221 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 ++ E L+A+ +DA++A + A +A E K + +G VE+GT Sbjct: 222 AMTVMENWLQAFDKIDAVVAENDEMALGARKAIE-AKKLDIPTIGVDGITDALDAVEKGT 280 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + D QG ++ +A A K ++ +D + V + V+ + Sbjct: 281 LIATIFQDGAGQGSKALEIAVAKAKGENVDKEYWIDFEPVTKDNVAEFKQRA 332 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 112/311 (36%), Gaps = 5/311 (1%) Query: 1 MTLHRFKKIALLS-ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 M F ++ + A+ +AA S+ + I +G FF N + + GV+ Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 +T + + S + Q I + Q NAI++S + + L PA++ A++ GV V+T D Sbjct: 81 LT-ESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVTIDRRV 139 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + + G GG A + AK+ P K + Sbjct: 140 DG-VQGILAHVGADNVKGGEAEASAMVAAFPNGAKLFHLQGQPGAGPAIDRNKGVHNVLD 198 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 ++I+ Q ++L E L A DAII + + A +A Sbjct: 199 PLKDKYQIIFEQTANFARAEALSVTEAGLAANGKPDAIICANDDMALGALEACAARNFTD 258 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK-- 297 V I GF V G + QQ + +V +A A K + + + Sbjct: 259 VKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKNKTEPKEKLVLLTPI 318 Query: 298 GVGQVEVSPNS 308 +G+ + Sbjct: 319 VIGKDNLDKAE 329 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 118/299 (39%), Gaps = 5/299 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-T 66 I LLS+ G + Q + I K+ ++ + GA+ A KE V + + P Sbjct: 20 LITLLSSCGGPGSGADHQQIYDVDMIVKMDRGDYWKTTKLGAEVAAKEFNVRLNFVAPEN 79 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 E V GQ++L+ + + +AII++A + L R + V++ DS+ Sbjct: 80 ENDVEGQIRLMEEAIERRPDAIILAASDYEALGQVTDRTSYYDIPVISMDSEVASTKVKT 139 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 ++ GT G + +++ + NQ + +A P Sbjct: 140 FV--GTNNYEAGQKAAERLVDLTGPVSEIGIINFVKGARNANQREEGFLDYVA-RFPDVH 196 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGF 245 +V Q+ +D + + +LK + +L+ I++ A + A +A + L KV ++ F Sbjct: 197 VVDIQYCGSDEYLAYKLTADMLKRFPNLNGIVSLSAESSIGAGRAVDELGYGGKVKMIAF 256 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 P M ++ V+ + + G ++V A + ++ D K + + Sbjct: 257 DNPPEMLELLQEEKVQAMVVQNPFNNGYMAVAAAVQAARGEKLEDRIPTDTKLIDLNNM 315 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 107/294 (36%), Gaps = 5/294 (1%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQLIN 78 + I K ++ + GA A K+ GV V ++ P ++GQ+ ++N Sbjct: 36 VPAKPAKHYHFTLITKSNASPYWLAVREGADAAAKKFGVSVAFEAPASGTDLAGQIGMVN 95 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 N V G + II++A +P L +K A+ + V+T DS P ++ + Sbjct: 96 NAVTGGTDGIILAAQNPQALLKPVKSALAHHIPVVTVDSGLSPNISDCFL-ATSNVGAAA 154 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT-TQFGYNDA 197 L A + K + A + T + K + K +P + + Q+ ND Sbjct: 155 ALAKYTADHLMGGKGQYAIVDFNHTASTGIARPKGFMLGM-KSYPHIKKMGPIQYSNNDV 213 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 + L+ A +L Y L I + A A+A + KV +VGF V+ Sbjct: 214 SAGLRIATTMLTQYPHLKVIFGANDRAALGPAEAVQRAHA-KVKVVGFDADLGEIALVKA 272 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 G ++ L G +V L ++ + + + Sbjct: 273 GIIQASILQSPYDMGYYAVVALLDKLDGKTLPKRINTPYFLLTPKNLGSSQATA 326 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 116/294 (39%), Gaps = 3/294 (1%) Query: 15 LGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQV 74 + IAF+ +VG F+ + GAQ+ LGV V GP + + Q Sbjct: 47 VTTVTAPPKASKNYNIAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQGPQKFDPTLQK 106 Query: 75 QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPA 134 ++++ V +A++V+ + L++A G++V+ D+ T + + Sbjct: 107 PILDSIVASKPDALLVAPTDVQAMQMPLEQAAAAGIKVVLVDTTTN-DPSYAVSAIASDN 165 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 + GG A +Q++ + KV P ++ + K + +A++ PG+ V Q+ + Sbjct: 166 EGGGRAAFEAIKQLHPEGGKVMVMGLDPGISTTDARTKGFEEAVAED-PGFTYVGVQYSH 224 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-KVAIVGFSTPNVMRP 253 ND + Q L+ DL + A + +A + +VA+VGF Sbjct: 225 NDPATAAQLIGAQLQRDPDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQ 284 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 + GTV+ D GK V A L+ G + + + + Sbjct: 285 ALREGTVQALVAQDPGTIGKFGVDEAVTALEGGENSPNVQTGFTIITRENLDGE 338 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 117/290 (40%), Gaps = 5/290 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 + + I I + ++ GA +A ++ G+D+ + GP ++ Q+ L+ Sbjct: 44 GQPASGEPRYHIVLIEQERYHPYWEMVEKGAAEAAEKYGIDIEFTGPVRNNMEEQLNLLE 103 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 + +AIIV ++ + P + +A++RG+ V+T D+D R Y+ GT G Sbjct: 104 KAIAARVDAIIVQGLNEERFTPVIDKAVRRGIPVVTIDTDAPNSQRLTYV--GTDNLAAG 161 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + + K+ S +Q Q + K I EH G EIV + Sbjct: 162 ERLGRLVVETTGGIGKIGVIIGSDQAANQLQRLDGLKK-IVAEHEGLEIVDVRSSNISHM 220 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 +++Q A +L+ + ++ ++ A QAA+N D + I+GF + +G Sbjct: 221 EAIQQAANMLRNHPEITIMVGTSATDALGVLQAAKN--RDDLTIIGFDNQKETLEAIRKG 278 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 ++ G+ +V + ++K ++K + V Sbjct: 279 EIEATVAQQPFLMGETAVRLLYEHFGGQALKKAYFTEVKVLNAHNVEEGE 328 >UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C4W6_THENR Length = 337 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 189/346 (54%), Gaps = 21/346 (6%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-----VDV 60 FK++ L+ L + +++ + +I +PK G +F + GA+ A EL VD Sbjct: 2 FKRVLFLTFLFFSILALAIDP-VKIFMVPKFTGAPYFVATEKGARVAVNELKSLGLVVDF 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT- 119 Y GP+ + Q+++I++ + Q +A+IVS + L LK+A Q G++V+T+D+D Sbjct: 61 FYTGPSVANTEEQIRIISSLIEQKPDALIVSPNDAEALSSILKKARQNGIKVVTYDADVA 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 PE R ++NQ T +G LV + +A++A + P +QN W+ K I Sbjct: 121 DPEARDVFVNQATFMSVGETLV-ELVAEGVGPEARIAIISADPNARNQNAWIDAMKKYIQ 179 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKA-YSDLDAIIAPDANALPAAAQAA-ENLKN 237 +++P +I+T ++GY+ +SLQ A+ I+ A Y ++DAI+AP + ALP AA+A + Sbjct: 180 EKYPKMKILTIKYGYDRPAESLQAAQDIINAYYPNIDAIVAPTSVALPMAAEAVLKAGLK 239 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 K+ + G +TPN +R YV+ G +K+F LW G +++YVA+AL + + + Sbjct: 240 GKIFVTGLATPNDVRRYVKEGVIKKFALWSPKDLGYLALYVANALAR--------NMVFE 291 Query: 298 GVGQVEVSPNSVQGYDYEADGNG---IVLLPERVIFNKENIGKYDF 340 G+ V+ + Y + + G +++L +IF+ NI ++DF Sbjct: 292 IDGERFVAGGKLGLYKIQKEVEGSKNVIVLGPPLIFDINNIDQFDF 337 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 110/315 (34%), Gaps = 6/315 (1%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + K L +AL A + IA I FF + GA+ ELG T Sbjct: 1 MKNTLLKSCLTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYT-T 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + V+ Q QLI + + AII+ D LK+A G+ D + Sbjct: 60 LVASHDDDVNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREINE 119 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + G L + K K + T+ + + I + Sbjct: 120 TGI-AVSQIVSNNYQGAQLGAEKFVTLMGGKGKYIELLGRESDTNAHVRSQGYHDVIDE- 177 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 H ++V Q T++ E IL+A D+ +I+ + A A + + V Sbjct: 178 HSDMKMVAQQTANWSQTEAFNRMESILQANPDITGVISGNDTMALGAEAALKAAGRNDVV 237 Query: 242 IVGFSTPNVMRPY-VERGTVKEFGLWDVVQQGKISVYVADALLKKGS--MKTGDKLDIKG 298 +VGF + +R + G +K L Q +++V AD LK G ++ +D Sbjct: 238 VVGFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKTGLEEKQLMDCVL 297 Query: 299 VGQVEVSPNSVQGYD 313 + + +V Sbjct: 298 IDENNAKNLNVFALK 312 >UniRef50_A8F740 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F740_THELT Length = 337 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 135/347 (38%), Gaps = 17/347 (4%) Query: 1 MTLHRFKKIALLSALGIAAI------SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK 54 M + +++L+ +G + + + + K + +F G +Q GK Sbjct: 1 MLKRLYLLVSVLALVGAMLLLPNGEVFATSKGNFVMGTVVKSIAFNWFMRMEEGVKQFGK 60 Query: 55 ELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 + GV GP+ + QV +I + QG +AII K+AM G+ V+T Sbjct: 61 DYGVTAFMQGPSVADSAQQVAIIEQLIAQGVDAIINVPYGVQENDLVQKQAMDSGIIVVT 120 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 ++ Y + G ++ A+++ + + F S T N+W A Sbjct: 121 HEA-ATARYAHYDVEAFDNKSYGEEMMRQLAQRMGYE-GEYVQFVGSLTNASHNEWQDAA 178 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K P + + D + T + +LK Y ++ ++ A + +A + Sbjct: 179 RVYQEKNFPKMKCIGKFESREDIEAAYTTMKDLLKKYPNIKGVLGSAAGDVVGVGRAVQE 238 Query: 235 LK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 +DK+ +VG S + ++ G V WD G + VA LLK ++ G Sbjct: 239 AGLSDKIVVVGTSIVSYAGELLKTGAVDLAMCWDPALAGYAANVVAYKLLKGEKIEEGMD 298 Query: 294 LDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 L + G ++ + N G ++ ++ + N+ KY+F Sbjct: 299 LGVPGYTKIHIVKNEY--------GVPVIYGQGWILIDASNMDKYNF 337 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 24/307 (7%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE-----PSVSGQVQL 76 +IA++ K F+ G Q +ELG+ E V Q+ Sbjct: 72 GTATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQIST 131 Query: 77 INNFVNQG-YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 I ++ + ++++ L P +++A Q+G++V+ D+ + ++ Sbjct: 132 ILELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTDQILTFVTF--DNF 189 Query: 136 LGGMLVDMAARQVN------KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG--WEI 187 GG ++ Q +K + S + + + + + + EI Sbjct: 190 EGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNYSLEI 249 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFST 247 + + + K+ + L+ + +D I+A D A++A + + I GF Sbjct: 250 LDLKSADWETKKAKMITQAWLEKFPTIDVIMAADDQMAVGASEAVQEANKSGIIITGFDG 309 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS--------MKTGDKLDIKGV 299 ++ G + Q + + L+K + + + Sbjct: 310 TPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQTENSLLI 369 Query: 300 GQVEVSP 306 Q ++ Sbjct: 370 TQDNINE 376 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 100/314 (31%), Gaps = 9/314 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQ------AAERIAFIPKLVGVGFFTSGGNGAQQAGK 54 M I + + + RI F N + K Sbjct: 1 MKKTSRILIIFAATCFLLTACAQKKSIVYKSKKYRIGLSIPASDDVFRNKIINAMENEAK 60 Query: 55 ELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 L + + Q I+N V Q NAI+V V + A G+ +++ Sbjct: 61 NLPDTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPIIS 120 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 ++ K + G+ + G++ A + K V P + + Sbjct: 121 VNNFLKNQD-DAAAYVGSDSITSGIMEAEYAVKQLNGKGNVVILKGEPNHETAIKRTEGF 179 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 K + +P +I+ Q+G T +Q E +K + DAI+A + A A + Sbjct: 180 KQVLQ-NYPEIKIIDEQYGDWKRTLGMQITENWIKNGTKFDAILANNDEMAIGAIMALKE 238 Query: 235 LKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 + V + G ++ G++K + QG ++ A L+K + Sbjct: 239 NNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEKINKKIF 298 Query: 294 LDIKGVGQVEVSPN 307 + + V + Sbjct: 299 VPYELVVPNDADKY 312 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 108/329 (32%), Gaps = 31/329 (9%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAA----------------------ERIAFIPKLVG 38 MT + ++ +G++ + + + I Sbjct: 5 MTRKKMLIFTAITLIGVSVLLGGCGSKQGNTQTGTSSGTTTQNTEKSGEKVIGVSLLTRE 64 Query: 39 VGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGL 98 F+ Q+ + ++ + Q+ + +F+ Q +AI+++ + G+ Sbjct: 65 HVFYNLIEKAIQEKAQGYKFKPIIMDASQ-DSNKQLAQVQDFITQKVDAIVLAPTASAGI 123 Query: 99 CPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA-ARQVNKDKAKVAF 157 PA+ A + G+ V T D + + +S + T GG L A +V K KVA Sbjct: 124 APAVDLAKKAGIPVFTIDIKAEGDVKS---HVATDNYAGGKLAAKYAAEKVLNGKGKVAI 180 Query: 158 FYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAI 217 S V K K +A+ +P ++V + A K+ + IL + DLD I Sbjct: 181 ITYSE-VQSCVDREKGFKDALAE-YPNIKVVDVENCSGSAEKAANLTQDILLKFPDLDLI 238 Query: 218 IAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER-GTVKEFGLWDVVQQGKISV 276 A A + + V ++GF ++ G + Q G + Sbjct: 239 FAVGDPFAVGAVSTIKAAGRN-VKVIGFDGNPEAIQEIKNHGLWVADVVQHPDQIGGKVI 297 Query: 277 YVADALLKKGSMKTGDKLDIKGVGQVEVS 305 + S+ + V Sbjct: 298 DLIADYFNGKSVPPQVLIPPTIVDASNAK 326 >UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=9 Tax=Bacillales RepID=C6CRC9_PAESJ Length = 337 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 112/295 (37%), Gaps = 17/295 (5%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 E+ + L G+ ++ +G G + A + LGV V Y G T+ V ++ ++ + + Sbjct: 43 DEKYVMVNFLAGIDYWKNGLKGFEDAAEALGVSVEYRGSTQYDVQEEMMVLEQVIARSPA 102 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 I VSA+ + L PA+ +A++ G+ V+ +D+D YI GT G+ Sbjct: 103 GIAVSAIDSEALNPAINKAVEAGIPVVMFDADAPRSKAYSYI--GTNNYNAGVTAARKMA 160 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 ++ KV P + + + + + KE P ++V G D S Q Sbjct: 161 ELTGGTGKVGVIT-LPNQLNHQERTRGFEETLEKEFPDLQLVGIADGKGDQMISEQKVRD 219 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGL 265 +L ++DL I +AN A A L D+V I+ F T V+ GT+ Sbjct: 220 LLSKFTDLSGIFVTEANGGVGAGNAILRLNKLDQVKIISFDTDKGTLDMVKSGTISATLA 279 Query: 266 WDVVQQGKISVYVADALLKK-------------GSMKTGDKLDIKGVGQVEVSPN 307 G S+ L + T I V +V Sbjct: 280 QGTWNMGYWSLMQLFHLRNHIVNPMSDNGDSSIPPLPTNIDTGITVVTPGDVDQF 334 >UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB2_9BACT Length = 327 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 98/310 (31%), Gaps = 9/310 (2%) Query: 3 LHRFKKIALLSALGI----AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGV 58 L R +L+ +G A + + A + + FF +G +Q E G Sbjct: 20 LRRLLLCSLIVLVGCEKKPAPDTAGAAGSRFFAVSFQTLNNPFFVDLNDGLKQVIDEHGD 79 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + + S Q +++ + Q AI ++ V+ + + L A + V+ D+ Sbjct: 80 RLVTLD-AQFSSLKQKNDLSDVIEQKPAAIFLNPVNWESVRATLIAARNAKIPVIVVDAP 138 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + + G L A AKVA S V + Sbjct: 139 VP-DADLVLAQVASDNVAAGRLAAQALGDARPQ-AKVAILQYSV-NKACVDRVAGFTDVL 195 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN- 237 AK PG I+ Q + + +L + DLDA+ + A + Sbjct: 196 AKSFPGATIIARQDVKGTSEATRPVMRDLLGRFPDLDAVFPINDPGAIGCVSAIDAAGRS 255 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 KV +V ++ G + + G ++ A L + K+ + Sbjct: 256 GKVLVVTVDGSREAAQFILNGGIHSTSAQFPKKIGSLAAGAAYDHLAGKPVDKEIKVPVT 315 Query: 298 GVGQVEVSPN 307 V + + Sbjct: 316 LVTKANAAEF 325 >UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K692_BACHD Length = 332 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 113/322 (35%), Gaps = 21/322 (6%) Query: 1 MTLHRFKKIALLSALGIAAIS------------------MNVQAAERIAFIPKLVGVGFF 42 M H F + + + A S + I + ++ Sbjct: 1 MKRHLFFVVGFMICISALATSIYSFVQVTRVETNVPSSTSISLPSSHFVLIAEEENNSYW 60 Query: 43 TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL 102 GA++A + V V Y P + Q++LI+ ++ + IIV AV+ + P + Sbjct: 61 RLVEKGAREAENQFDVLVEYKAPKRSNPEEQLKLIDMAISAKVDGIIVQAVNEEMFTPLI 120 Query: 103 KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSP 162 +A+ G+ V+T D+D R YI GT G + A + VA S Sbjct: 121 NKAVDAGIPVITIDTDAPRSNRVAYI--GTDNYYSGTIAGKAMLDDMEGDIHVAVITGSL 178 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 + Q V+ + P +V + ++ A +++ + ++A A Sbjct: 179 ESSHQKLRVQGFID-MISNEPRVTLVEVEASNISRLEAELKAHQLMEEHPHINAFYGTSA 237 Query: 223 NALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 AAE L D + ++ F T +E+ + + + + G SV + + Sbjct: 238 LDGIGIVAAAEKLGLDDLYVIAFDTLPENLSLLEQEKIDAIVVQEPFEMGLKSVELLLDI 297 Query: 283 LKKGSMKTGDKLDIKGVGQVEV 304 + + + + ++ Sbjct: 298 REGQPYSMTNHTHTSIIRKPDL 319 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 113/314 (35%), Gaps = 13/314 (4%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-T 61 + RFK + A+ S++V +AE A I K + F+ + G + K LGVDV Sbjct: 1 MKRFKTLKSCLAILGLVCSVSVYSAE-YAVILKTLSNPFWVAMKEGIENEAKALGVDVDI 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK- 120 + P+E Q+QL + +N+ Y I + +SP L +A ++G+ ++ D Sbjct: 60 FASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDI 119 Query: 121 ------PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 +I +GG ++ + +VA + A Sbjct: 120 KNLQKAKGNVEAFIT-TDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGA 178 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K ++V +Q D K+L A +L +L A + AQA N Sbjct: 179 REVFVKSSS-IKLVASQPADWDRIKALDVATNVLSRNPNLKAFYVANDTMAMGVAQAVIN 237 Query: 235 LKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK-KGSMKTGD 292 K+ +VG R V + D G + + + + Sbjct: 238 AGKQGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQIPVDV 297 Query: 293 KLDIKGVGQVEVSP 306 + I+ V + +S Sbjct: 298 EPKIETVDSILISQ 311 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 108/311 (34%), Gaps = 12/311 (3%) Query: 13 SALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSG 72 A A + + ++IA + F + G G + KELGV+VT + S Sbjct: 23 CAPSAAQEANDGTKTKKIAVLLYSQSFEFMVALGQGVKDKAKELGVEVTVLD-AKGDSST 81 Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q+ I + + QG + I++S + L P ++ G V T DS + + Sbjct: 82 QISQIQDQLAQGVDGIVLSPNNSAELVPGVQMIHDAGKTVTTVDSVIPGDIADAAV--AF 139 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 + G L A ++ +K V + + K I K+ PG +++ + Sbjct: 140 DNEKAGKLGAEALAKLMGEKGTVLEYQGAKGAYHAILRGKGFNDGI-KQFPGIKVIG-RD 197 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-------KVAIVGF 245 A +L A S ++ + + + + + D + +VG Sbjct: 198 AQWTADNALSLTVDNFTADSSINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPLVGV 257 Query: 246 STPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 + + G + + G +++ LL + D K + + V Sbjct: 258 DGTPLALDRIRNGVQDATMDQNPFEMGALALQAQVDLLDGKQVPKMQLTDTKLITKENVD 317 Query: 306 PNSVQGYDYEA 316 ++ G ++ Sbjct: 318 DPTLWGNIFKD 328 >UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPH3_9BACL Length = 329 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 18/328 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAE--------------RIAFIPKLVGVGFFTSGG 46 M + +++ G A + +A I F+P FF S Sbjct: 1 MIGSAVVAMGVVAGCGTTANTAGSNSASLSSSQQSAASSKQFVIGFVPGETTDPFFISMA 60 Query: 47 NGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAM 106 GAQQ K+LGV + Y+G + S S Q +N V++ NA+IV + P +K+A+ Sbjct: 61 YGAQQEAKKLGVKLIYEGASTYSPSAQTPYVNAMVSRHVNALIVCPTDLTAMIPPIKQAV 120 Query: 107 QRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTD 166 G++VLT DS + + + GG + + V SP ++ Sbjct: 121 NAGIKVLTADSTIS-DASLLTSRITSDNEQGGAAAADFLGSMAHGQGVVGVLDPSPGIST 179 Query: 167 QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANAL 225 V A++ K++P ++V ++ T++ Q A+ ++ Y L I D + Sbjct: 180 DKARVDGFIAEMKKKYPKIKVV-IEYDNEQTTQAEQLAQDLMLHYGKSLVGIFGTDDTSA 238 Query: 226 PAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK 284 AAQ + V IVG+ ++ G + + +G+++V A L+ Sbjct: 239 SGAAQGVRSSGSATHVNIVGYDAEPAEVQDLKEGMISALIAQKPMIEGELAVEYAVEALE 298 Query: 285 KGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 S+ +L + + ++ N Y Sbjct: 299 HKSVPKFVQLPNVVITKANLAQNQQWIY 326 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 113/331 (34%), Gaps = 12/331 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVT 61 + K I +L L A RI + + + + + GV V Sbjct: 5 MKYMKWITVLFCLLGLAACRQDAPRFRIG-VAQCSDDSWRHKMNDEILREAMFYDGVSVE 63 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + Q + ++ F+++G + +I+SA + P ++ A Q+G+ V+ D Sbjct: 64 IRSAAD-DNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILS 122 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + YI G G V K K V T + + A I+ Sbjct: 123 DKYTAYI--GADNYEIGRAVGNYIASSLKGKGNVVELTGLGGSTPAMERHQGFMAAIS-N 179 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-V 240 +P +++ + + + +L+ + +DA+ A + P A QAA+ +K + Sbjct: 180 YPDIKLIDKADAAWEREPAEVEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAKKAGREKEM 239 Query: 241 AIVGFSTPN---VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 VG V + ++ G + +A +L+K S ++ Sbjct: 240 IFVGIDALPGKGNGLELVLDNVLDATFIYPTN--GDKVMQLAMNILEKKSYPRETVMNTA 297 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERV 328 V + +Q I L R+ Sbjct: 298 VVDRTNAHVMQLQTTHISELDQKIETLNGRI 328 >UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C7R7_THENR Length = 350 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 75/330 (22%), Positives = 130/330 (39%), Gaps = 24/330 (7%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G Sbjct: 20 SEDMTILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKG 79 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 + I +S P+G+ +KRA+ +G+ V+ +DSD+ R YI GT G Sbjct: 80 VDGIGISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYI--GTNNYNAGYEAGKL 137 Query: 145 ARQVN------KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIV---TTQFG 193 Q+ K ++A + N+ ++ K + + G EIV Sbjct: 138 MAQLIEKYKAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPC 197 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK----NDKVAIVGFSTPN 249 +DA K++Q + Y+DLD A +A+ + L ++ IV F T Sbjct: 198 NDDAAKAIQILRDASRKYTDLDGWFASNASLVAPPNTIISALGGPQRAKELLIVAFDTLE 257 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 V+ G +K G S + + K G KT L + V+ Sbjct: 258 PELELVKAGVIKGLIGQRPYDMGYFSTVLLYFMAKDGVEKTLGNL------EKIVAEYGK 311 Query: 310 QGYDYEADGNGIVLLPERVIFNKENIGKYD 339 Y +G+ I+ I ENI +Y Sbjct: 312 PDYKIVKEGDYIIDTG-VDIVTSENIDEYY 340 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 100/305 (32%), Gaps = 5/305 (1%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 A G I + FF K+ G+ V Sbjct: 18 TMVVGATACGRGGNGAKTADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIVSD 77 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 + QV I +F+++ +AII +K A + + V+T D + E Sbjct: 78 -ARGDAATQVNQIQDFISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPG 136 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 +I + + + + + K ++A T Q K + K PG Sbjct: 137 KSFI--ASDSVAAARTLGNYVVKESGGKGQLAILQGQIGTTPQVDRQKGFGQAL-KNAPG 193 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIV 243 ++V+ Q K+ ++ +L+A+ +D + AAQA + K IV Sbjct: 194 IKVVSQQPADWAQDKAYSVSQDMLQAHPGIDILWGQADAMALGAAQAVKASGSKKKHLIV 253 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 GF V RGTV + + G++SV A ++K + + + Sbjct: 254 GFDGDIAGLKAVRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKVPAQQLQPAFLLTSKD 313 Query: 304 VSPNS 308 + Sbjct: 314 KKKAT 318 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 116/289 (40%), Gaps = 7/289 (2%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL--GVDVTYDGPTE-PSVSGQVQ 75 + + +IAFI K + FF + A++ G++ + V P ++ Q+Q Sbjct: 45 GQTASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQ 104 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ + +AI+++ +G+ PA+K+A G+ V+T ++ Y+ G Sbjct: 105 LVEQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKANGGDIVSYV--GAQNF 162 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + A + + KV + + + K + + +PG E++ +Q Sbjct: 163 DVGYSLATALFEKLGGQGKVILIEGKAGNSTSEERAEGFKEALKE-YPGIELLASQPADW 221 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPNVMRPY 254 D ++ E L+ Y +D ++ + +A ++ DK + + F + + Sbjct: 222 DRASAMTVMENCLQTYDQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDVISA 281 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 ++ G + G + Q I++ A L + + + I V + Sbjct: 282 LKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMPITVVTAED 330 >UniRef50_A9HG18 Ribose ABC transporter, substrate-binding protein n=3 Tax=Acetobacteraceae RepID=A9HG18_GLUDA Length = 368 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 15/335 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + + L A + +I F+PK++G+ +F++ G + G+ + Sbjct: 44 KHSAVIAALVAAGLSCMAPAQGRAETFQIGFVPKVIGIPYFSAMQQGFLKGGRAFDARIV 103 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 Y GPT SV+ Q Q++ + +N+ +A+ V+A SP L A +RGV + DS Sbjct: 104 YQGPTTSSVAAQAQIVQSLINRKLDAVAVAANSPTALEAQAVHARERGVIFASTDSQVDG 163 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + Q T L LVD A Q D ++AF PT T+ N W+ K+ +A + Sbjct: 164 DAVDLRVMQATDEALAHTLVDQLATQ-IPDGGQIAFVSGGPTATNLNMWISLMKSYLAAK 222 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKV 240 P +++V+ Q+ D +K+ + IL AY L II + A P AAQA + K+ Sbjct: 223 FPKFQLVSVQYAGEDISKATEITSQILSAYPGLKGIIGVNTTATPGAAQAVLQAGLAGKI 282 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 AI G PN +RPYV GTVK LW+ V G ++V+ LL+ ++ + + G+G Sbjct: 283 AITGIDDPNTIRPYVLNGTVKSAVLWNPVDLGYLTVWGLTQLLQHKPLQVQN--PVPGLG 340 Query: 301 QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENI 335 + P + +LL + ++F KENI Sbjct: 341 TITYDPKT-----------KTLLLGQPMVFTKENI 364 >UniRef50_C0C300 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C300_9CLOT Length = 347 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 36/354 (10%) Query: 7 KKIALLSALGIAAISMNVQAAE----------------RIAFIPKLVGVGFFTSGGNGAQ 50 +A + G+A + + ++ +PK++G+ F S N A+ Sbjct: 10 VILAFVLVFGLAGCTRGGAEKKEDKTSSSESKKNGEDLKVVMMPKVMGMPIFESYYNSAK 69 Query: 51 QAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNAIIVSAVSPDGLCPALKRAMQRG 109 + ELG+ + Y GP+E S QV L+ + ++ G +A+++ + L P LK AM G Sbjct: 70 EQADELGITLDYIGPSELDASKQVNLVQDLISGGDTDALLICPADGEALVPVLKEAMDAG 129 Query: 110 VRVLTWDSDT-KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQN 168 + V TWD D R Y+IN + G + ++ K K K+ + T T Sbjct: 130 IHVYTWDDDVVDESAREYFINMCSDKIYGEQM-GKTVGEMLKGKGKIGVVNGNMTATSLT 188 Query: 169 QWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 + + + E+P +++ T + D K+ + +L A DLD I L A Sbjct: 189 LKEEALQDVLKNEYPDIKVMPTVYHGGDQQKAYALCQDLLTANPDLDLIAVIATPGLLGA 248 Query: 229 AQAAENLKNDKVAIVGFSTPNVMRPYV-ERGTVKEFGLWDVVQQGKISVYVADA-LLKKG 286 AQA + ++V + G PN ++ Y+ + G LWDV+ GK +V + + L Sbjct: 249 AQAVDASGRNEVIVYGAEQPNNIKEYMKKDGLEVVGCLWDVMTLGKEAVNIVYSCLADGK 308 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 K GD +V+GY + + + F+K+ + Y+F Sbjct: 309 EYKEGD---------------TVEGYPESSVEGTNITFNAVLEFDKDTVDDYNF 347 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 230 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 113/315 (35%), Gaps = 19/315 (6%) Query: 1 MTLHRFKKIALLSALGIAA-----------ISMNVQAAERIAFIPKLVGVGFFTSGGNGA 49 M + +L + + + I F+ S + Sbjct: 1 MKKILLVLVTMLFIFSCGSKDQAAGKTEDKPTETGEKTYTIGVSLLTQQHPFYLSLKDAI 60 Query: 50 QQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRG 109 ++ V + ++ Q+ I +F+ + +AII+S V G+ A+K+A Sbjct: 61 EKEAAAQNVKLNVSI-ANQDLNKQISDIEDFITKKVDAIIISPVDSKGVLAAVKKAEAAN 119 Query: 110 VRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQ 169 + V+T D + T GG + ++ K +VA PTV Q Sbjct: 120 IPVITVD--VPAIGVDVAAHVATDNYTGGKIAGEEMARLLNGKGEVAVIEY-PTVDSVVQ 176 Query: 170 WVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAA 229 ++ K IAK +P +IV Q ++L A+ +++A +L I +A AA Sbjct: 177 RIEGFKEVIAK-YPDIKIVAIQ-AGITRPEALTAAQNMIQANKNLGGIFGFGDDAALAAV 234 Query: 230 QAAENLKN-DKVAIVGFSTPNVMRPYV-ERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 A ++ D++ ++GF R V + + GKI+V +LK Sbjct: 235 AAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAVITQYPEDMGKIAVDTTLKILKGEQ 294 Query: 288 MKTGDKLDIKGVGQV 302 ++ + + Sbjct: 295 VEKNIPVTPGIFTKE 309 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 101/324 (31%), Gaps = 9/324 (2%) Query: 1 MTLHRFKKIAL-LSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 MT ++ + L + A I + + + ++ + Sbjct: 10 MTFRKYHILFLYFALFACLACQRERNPRYVIGVS-QCSEDLWRQTMNEELKREVALYQAN 68 Query: 60 VTYDG-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + Q+ I F+ Q + ++VS + P +++A Q+G+ V+ D Sbjct: 69 TELLIRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRK 128 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 E + Y+ G G A + K K +A + T + K + Sbjct: 129 IATESYTAYV--GANNYQIGKEAGHYAIGILKGKGNIAEVRGTKGSTSDAERHKGFVDAL 186 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND 238 P IV +G + + + + + ++D + A + +AA Sbjct: 187 -NNAPEVRIVAETWGNFLKADAKVQMQQLFQQHPNIDLVFAMNDPMAAGTHEAAMQFNGK 245 Query: 239 KVAIVGFST-PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 I+G +E ++ G+ + +A +L K + + L+ Sbjct: 246 IPFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMKILHKQPFERENILNTA 303 Query: 298 GVGQVEVSPNSVQGYDYEADGNGI 321 V + V +Q I Sbjct: 304 VVDKSNVRILQLQTEQIAQKQAKI 327 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 116/315 (36%), Gaps = 10/315 (3%) Query: 4 HRFKKIALLSALGIAAISMNVQAA---ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 RF +A L AL + A + N + F+ G ++ + + V Sbjct: 8 RRFWWLAALCALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQKLTV 67 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 E ++ Q + N+ Q AI+V G+ PA+ RA Q + V T D K Sbjct: 68 R-LDAGEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTADIRAK 126 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 +I + GG L A + + +VA P + + V+ + + K Sbjct: 127 EGAVVSHI--ASDNVAGGRLAGEYAAKRLNGRGQVAIID-QPYIQSVIERVRGFEEAL-K 182 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 +P +V G +SL+ AE +L++ LDA+ A + + A E + Sbjct: 183 PYPNIRVVARLTGDGVRDRSLKAAEDLLQSQRKLDAVFAVNDESAFGVVSAIEAAGRKGI 242 Query: 241 AIVGFSTPNVMRPYVERGT--VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 ++G+ R + G ++ D + G+ ++ L ++ + ++ Sbjct: 243 FVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIRAVATHLAGQPVEPVIPVPVRL 302 Query: 299 VGQVEVSPNSVQGYD 313 V + + ++ Sbjct: 303 VDKAALGNETLTPAP 317 >UniRef50_Q0S9A1 Possible sugar transporter, solute binding component n=24 Tax=Bacteria RepID=Q0S9A1_RHOSR Length = 358 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 17/331 (5%) Query: 14 ALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQ 73 A G A +Q ++AF+PK + + G + A +E G + GP + S S Q Sbjct: 41 ATGTANPDAPIQDGLQVAFLPKQLNNPYSDIEVGGGKTAVEEFGGEYKLVGPNDASASSQ 100 Query: 74 VQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTP 133 V IN + QG N I ++A P+ +CP+L +A G++V+T+DSD +CR +INQ T Sbjct: 101 VSYINTLIQQGQNVINIAANDPNAVCPSLNQARDAGIKVVTFDSDAAEDCRDLFINQATT 160 Query: 134 AQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE--HPGWEIVTTQ 191 +G L + K+A ++P T+QN W++ KA++A + + E+V T Sbjct: 161 QGVGETLA-KMTSEQIGGTGKIAVLSATPNATNQNAWIEVLKAELASKPEYQNIELVATV 219 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNV 250 +G +D KS Q +G+L+ Y DL AI++P + AAA+ + + + G TPN Sbjct: 220 YGNDDDQKSFQETQGLLQTYPDLKAIVSPTTVGIAAAARYISSSSYKGNIVLTGLGTPNQ 279 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 MR YV+ GTVKEF LWD G +S Y AL + E + Sbjct: 280 MREYVKNGTVKEFALWDPTNIGYLSAYAGAALASGQ------------ITGAEGQKFTAG 327 Query: 311 GY-DYEADGNGIVLLPERVIFNKENIGKYDF 340 +Y G V+L +F+ +I +Y+F Sbjct: 328 KLGEYTIGAGGEVVLGPPTVFDANSIDQYNF 358 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 15/330 (4%) Query: 1 MTLHRFKKIALLSALGIAAI-----SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKE 55 M RF + A AL A+ + RIA IP L F+ + GA+ A Sbjct: 1 MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 +G + + G + + QV +++ + + +AI+++ L LK+A G+ ++T Sbjct: 61 IGAQIIFQGAPDFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMITV 120 Query: 116 DSDTKPECRSY--------YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 D+ + LGG + + DK KV P V+ Sbjct: 121 DTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLALAIGDKGKVYVSNVKPGVSTT 180 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA 227 +Q + K+++AK HPG ++ TQF NDA K+ + + DL + + + Sbjct: 181 DQREQGFKSEMAK-HPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGLG 239 Query: 228 AAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG 286 +A + + + +V F P + ++ G + + G V A A L Sbjct: 240 SANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAYAHLTGQ 299 Query: 287 SMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 S+ T + + V+ +V + Y Sbjct: 300 SIPTKIGTGFTVINKSNVTDPAVARFIYAE 329 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 12/302 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-T 61 ++++ K + +G+ + AAE A + K + F+ G + K LGV V Sbjct: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK- 120 + P+E Q+QL + N+ Y I + +S L + RA ++G+ ++ D Sbjct: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 Query: 121 ------PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 ++ +G ++ + +VA A Sbjct: 120 DNLKKAGGNVEAFVT-TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 K ++V +Q D K+L A +L+ ++ AI + AQA N Sbjct: 179 TEAFKKA-SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 Query: 235 LKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 KV +VG R VE G + + G + + K G + DK Sbjct: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 Query: 294 LD 295 Sbjct: 298 AP 299 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 91/281 (32%), Gaps = 9/281 (3%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 + + FF + + + G DV E V+ Q + +F+ G+ Sbjct: 49 SKGTVGVSLLTTTNPFFNVIADNIKSELVKEGYDVEVV-SGEFDVARQKNQVKDFIVAGH 107 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 AI++ G+ PA++ A G+ V T D + T GG A Sbjct: 108 AAIVLCPCDSRGIGPAIQEATAAGIPVFTADIACLAPGAEVVSHIATDNLGGGKQAAEAM 167 Query: 146 RQVNK-DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG-----WEIVTTQFGYNDATK 199 + KV V+ K I K + IV+ G K Sbjct: 168 IEAVGSAGGKVVILDFKA-AESCILRVQGFKEVIDKHNSENPSSAITIVSELPGDGQKDK 226 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERG 258 S + AE L+A+ DL I A + + A A E D+V IVGF ++ G Sbjct: 227 SYKAAEDALQAHPDLAGIFAINDPSALGARAALEKANKADQVKIVGFDGQPDGMQAIDEG 286 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 + + Q GK + + + + Sbjct: 287 KIFADPIQHPDQIGKRVAASIVSYFRGEEVPKEQLIPTGLY 327 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 105/335 (31%), Gaps = 26/335 (7%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER-------------IAFIPKLVGVGFFTSGGN 47 M L+ A + + ++ +AF + F+ + Sbjct: 1 MKKRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWY 60 Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 G ++ KE G + T P + + Q+ + + V +G +AI V+ + + + PAL + Sbjct: 61 GFEKQAKEYGWEATLLDP-QGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNE 119 Query: 108 RGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQ 167 GV V D + E T G + + + V + T Sbjct: 120 AGVPVFCVDRRGEGE---VVSTLETDNVKAGEAMAEQLVKDYGEDVDVLIIQGVLSDTPT 176 Query: 168 NQWVKEAKAKIAKEHPGWEIVTTQF-GYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 + K + +++ IV G +L T + L+ DLD I +P Sbjct: 177 LDRTQGVKNVL-EKYENITIVGEPSAGEYSNEAALATTKNFLETNPDLDVIFTCTDALVP 235 Query: 227 AAAQAAENLKN-------DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVA 279 A + + V I + +E GTV +Q G +V Sbjct: 236 GIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGIDTVKSM 295 Query: 280 DALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 L G ++ + V + + + Sbjct: 296 KTYLDGGKVEEKVYYNGDVVTDENIDKLHDDLWGF 330 >UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY95_ACICJ Length = 329 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 115/292 (39%), Gaps = 5/292 (1%) Query: 28 ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNA 87 + IA +P + F+ + +GA K+LG+ + + G + S Q+ + + + A Sbjct: 36 KTIALVPGIATDPFYITMQHGAAAEAKKLGLHLIWQGGSSFSPETQIPALQALLAKHPAA 95 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQ 147 ++V+ + L +++ + G+ V++ D+ + GG A Sbjct: 96 LLVAPTNEKALINPIRQFIAAGIPVISVDTTISDTAIL-KSRITSNNVQGGASAARAIAG 154 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 K VA P ++ + K A++ K + G ++V ++ + TK+ A+ + Sbjct: 155 FAHGKGDVAVINVKPGISTTDARQKGFLAQM-KHYKGMKVVAIEYDDDSPTKAFTEAQLL 213 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLW 266 L Y L I A + + +A KV +VG+ +++G + + Sbjct: 214 LLKYPHLKGIFATNVFSGEGVGKAVVAAGKKGKVDVVGYDAEPGEVKLLKQGVISTLIVQ 273 Query: 267 DVVQQGKISVYVADALLKKG--SMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 ++G++ V A +L + +L V E S + Y Y A Sbjct: 274 RPAEEGRLGVKYAYDILTGKSAQVPASKRLANITVTTAEASNPTYAKYFYSA 325 >UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TWQ1_YERKR Length = 329 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 146/344 (42%), Gaps = 19/344 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNV-QAAERIAFI-PKLVGVGFFTSGGNGAQQAGKELGV 58 M +H +A+L + ++ A E + + + +F G ++A K+ G+ Sbjct: 1 MKIHNKLTLAVLLSFSALCTTVPAYAADETYSMVGIPKLRSAWFNDYETGLKKAEKDFGI 60 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 + P QV +I + ++QG NA++V + + P K+A + + V+T +S Sbjct: 61 KTYFQAPASADEQQQVSVIRDSISQGNNALLVVPNNASSVEPVFKQARAQNIVVITHES- 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + Y + + G ++D A+ +K + A + S TV N W A ++ Sbjct: 120 VNQKEADYDVEMIENQKFGSYMMDQFAKHA-GEKGEFAIYVGSLTVPAHNIWADAAIKRM 178 Query: 179 AKEHPGWEIVTTQ-FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 +++P ++V + D S Q ++ Y DL +++ + P A QA Sbjct: 179 KEKYPQMKLVAERFPVSEDRNASRQKTLELISTYPDLKGVLSFGSQGAPGAGQALREKGL 238 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 K+ ++G ++P ++E G + E LW + Y+A +L + L++ Sbjct: 239 VGKLTVIGTTSPKESARFLEDGAITESILWSPGEASYAMAYIAKMVLDGKRDQIKQGLEV 298 Query: 297 KGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 G+G+ E++ + ++ + + KEN KYDF Sbjct: 299 PGLGKPEINGMN-------------IIFDKPLTVTKENYKKYDF 329 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 111/289 (38%), Gaps = 6/289 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTE-PSVSGQVQ 75 A + FI K + F S +GA+ A + +++ GP SV Q+Q Sbjct: 46 AQAADPSVKTYNFVFIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQ 105 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ + G +AI+++ G+ PA+++A G+ + T ++ +I G Sbjct: 106 LVEQAITDGADAILITPADSTGIVPAIEKANAAGIPIATPNTKAYGGDVLTWI--GVDNY 163 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + A + + KV + + + V K +PG E++ +Q Sbjct: 164 TVGYELGTALCEALEGTGKVVLIEGTAGNSTSTERVDGYLDAF-KNYPGIELLDSQPADF 222 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAI-VGFSTPNVMRPY 254 + K + E L+ Y ++D + + + + A +A + + DK + V F N Sbjct: 223 NREKGMTVMENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDNDCLDA 282 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 ++ G + G + Q ++Y + + + V + Sbjct: 283 IDAGDILITGAQEEKSQIANAIYACLLACNGYKVAPEQYIPMTLVTKDN 331 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 119/328 (36%), Gaps = 21/328 (6%) Query: 1 MTLHRFKKIALLSALG------------IAAISMNVQAAERIAFIPKLVGVGFFTSGGNG 48 M F LL + + +A ++I + VG+F + G Sbjct: 1 MKKIIFLFTILLLIMSCGNKQETKAEGAAGNTAETKEAKKKIGVLIPGP-VGYFVAVREG 59 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 +A E V++TY S Q+ + + +++ + I ++AV + A++ A + Sbjct: 60 IDKAAAENNVEITYSD-AGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANEA 118 Query: 109 GVRVLTWDSDT----KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKA-KVAFFYSSPT 163 + +L + + E G G L A+ + +K KV P Sbjct: 119 NIPILAFTNAIGDKENGEYEGLITYVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGRPG 178 Query: 164 VTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDAN 223 + Q K + +E+V TQ + ++L+ E +++ +D IIA D N Sbjct: 179 TSPQINRRKGVMEALDTN-KNFEVVYTQTSNWEKEQALKIVEDLIQKNQTIDVIIAQDDN 237 Query: 224 ALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 + A A + DK+ ++G V+ G + V++G ++ A Sbjct: 238 SAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAAVKY 297 Query: 283 LKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 L ++ ++ V + V + Sbjct: 298 LNGEKVEPVTQMKQVEVNKSNVESFKGE 325 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 118/311 (37%), Gaps = 6/311 (1%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 R +A+L L S+ +A I K V ++ G +QA K+LGV T+ Sbjct: 2 RKILVAILIILFPLIFSIGYSKEIHVAVIGKSV-HPYWAEVELGVKQAAKDLGVKATFFV 60 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 P + + Q+ + +F+ G + I ++ P + P +++AM +G+ V+T D+D R Sbjct: 61 PQKEDIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMAKGIPVITLDTDAPQSKR 120 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNK-DKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 YI GT G + M + KVA S T + + ++ IA Sbjct: 121 LVYI--GTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMNSLERIRGFMDGIASNKR 178 Query: 184 GWEIVTTQFGYN-DATKSLQTAEGILKAYSDLDAIIAPDA-NALPAAAQAAENLKNDKVA 241 + D +++ AE L Y DL A N AA K +V Sbjct: 179 IVVVTKPALCDFEDTGRAVTLAEQALLTYPDLRGFFGVYAFNGPAAAKAVKAAGKVGQVL 238 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 IV F T ++ G + G SV V + +KG T +L + Sbjct: 239 IVCFDTTAEHMQLIKEGVISATVGQRPYMMGYKSVEVLTKMAQKGVDATLKELPANRIID 298 Query: 302 VEVSPNSVQGY 312 V + Y Sbjct: 299 TGVDVVAGDKY 309 >UniRef50_C6BZX1 Putative D-ribose-binding periplasmic protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZX1_DESAD Length = 312 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 95/291 (32%), Gaps = 3/291 (1%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQ 75 + A + I IPK F+ GA A ++ + + + GP E S Q Sbjct: 1 MLCFPCASYAQKTIVTIPKATIFNFWRIVCMGAHAAVEDSDITLIWRGPRVENKPSAQRH 60 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 L+ +++Q +AI+++ + L P +++A + G++++ DS + +I T Sbjct: 61 LLEYYIDQKVDAIVLAPMDRKTLNPYIEKASKAGIKIVIIDSPVTTDSIDGFI--ATDNY 118 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + K V SP K K+ PG I+T Sbjct: 119 KAGAMGAELMASKLKGTGPVLVVGHSPDNGSCALREKGFIDKMQALSPGRTIITIHMLDG 178 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 ++ + + IL + + + ++ + + F + V Sbjct: 179 SERETRLSTKEILTNTPSIAGVFTTNEATSDGVLHVMQDRNETHIPFIAFDYNQKLLEGV 238 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 ++ G V A LL + + + + + Sbjct: 239 RNKQIEALITQRPYALGFFGVRSAIELLNGKKISKHMESPVTIITNDNIDE 289 >UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Thermotoga RepID=B1LAH5_THESQ Length = 343 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 125/331 (37%), Gaps = 33/331 (9%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 I PK + ++ + NG + A ++LG+ +D P E + Q + I +++ +G Sbjct: 20 SEDMTILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIFDAPVEADAAKQAEKILSYIVKG 79 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 + I +S P+G+ +KRA+ +G+ V+ +DSD+ R YI GT G Sbjct: 80 VDGIGISPNDPEGIKVVVKRALDKGIPVIMFDSDSPDSGRYAYI--GTNNYNAGYEAGKL 137 Query: 145 ARQVN------KDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--EHPGWEIV---TTQFG 193 Q+ K ++A + N+ ++ K + + G EIV Sbjct: 138 MAQLIEKYRAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPFPC 197 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-----KVAIVGFSTP 248 +D+ K++Q + + Y+DLD L A + + + +VGF T Sbjct: 198 DDDSAKAIQIIRDVTRKYTDLDGWFMSGGWPLFAPKETVISALGGPERMKDLLVVGFDTL 257 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 V+ G VK G +SV V + K G T L V Sbjct: 258 LPELELVKAGAVKGLVGQRPYDMGYLSVLVLYNMAKIGVENTLKMLPKVVKEDGTVDYII 317 Query: 309 VQGYDYEADGNGIVLLPERVIFNKENIGKYD 339 G D I +EN+ ++ Sbjct: 318 DTGVD---------------IVTEENVDQFY 333 >UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasmic component) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C460_9PLAN Length = 321 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 108/316 (34%), Gaps = 17/316 (5%) Query: 5 RFKKIALLSALGIAAIS-----------MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAG 53 RF L A+G S + + + FF G G ++ Sbjct: 6 RFLIPLTLLAIGSIGCSNGSDSHSPQSDSTADSGRLFGASFQTMNNPFFVDLGEGLKKEL 65 Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 + G + + + Q +++ + Q I V+ V+ +GL +L A ++ V ++ Sbjct: 66 EANGDRLVILD-AQFNSLKQKNDLSDLILQNVAGIFVNPVNWEGLKGSLLEANRKKVPII 124 Query: 114 TWDSDTKPECRSYYI-NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVK 172 D+ K + + G L A +VN KA++ V Sbjct: 125 IVDAPVKKADEELIVCTVASDNVRAGELAAQALAKVNP-KARLVVL-HLSVNKACIDRVA 182 Query: 173 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 K ++ ++HP +I+ Q + ++ Y DLDA+ A + A Sbjct: 183 GFKTEL-EKHPEMKILDVQEAQGTTEGARPVMRDLIGRYPDLDAVFAINDPNALGVISAL 241 Query: 233 ENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 ++ D+V IV ++ G + + GKI+ A LK ++ Sbjct: 242 DSANKLDQVTIVTVDGSQAGIKAIQAGKLHSTSAQFPREIGKIAAEKMLAHLKGEPVEKD 301 Query: 292 DKLDIKGVGQVEVSPN 307 K+ ++ + Sbjct: 302 VKVRVELITAENAEQY 317 >UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9L7_LARHH Length = 330 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 104/292 (35%), Gaps = 9/292 (3%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSV-SGQV 74 + + + RI + K +F+ NGA +A E G+D++ E Q+ Sbjct: 34 AFSQSAGQNTSPARIVLVMKSPTNPYFSELANGASRAQLETGIDLSIKVAHEDDALEQQI 93 Query: 75 QLINNFVNQ-GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYIN---- 129 +LI+ + + +AI+++ L P L RA + G+ V+ + +P + Y Sbjct: 94 RLIDEVIAKHQADAIVIAPTDSIRLVPVLARARKAGIHVINIGNRLEPRIVALYGMPVVP 153 Query: 130 -QGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 V + +KVA + Q + A ++ G +V Sbjct: 154 LISIDNASAAYQVAGKLAEGLPRGSKVAIIEGLLGTNNTRQRTEGALQAFSEA--GLRVV 211 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTP 248 Q ++ Q +L+ Y DL AI + AA+ V + GF Sbjct: 212 AKQSARWKGDEAYQVTAQLLRDYPDLRAIFCSNDMMALGAARYLREKGITGVRLAGFDGI 271 Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 R + + + +QG ++V +A + + +D + + Sbjct: 272 TEARSALHQRQLVATIDQHASEQGYLAVRLAVDAIAGRPLAEETLVDTELLT 323 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 122/316 (38%), Gaps = 10/316 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-T 61 F +A + + A + A I I K ++ GA++AGK+LGV+V Sbjct: 10 RRAFTALAGAAVIATAMPVTSFAADVTIPIIVKDTTSFYWQIVLAGARKAGKDLGVNVPE 69 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 E ++GQ+ ++ N V A+++S L + A + V ++ DS Sbjct: 70 LGAQAESDINGQISILENAVAGKPAAVVISPTEFKALGKPIDEA-AKSVPIIGIDSGADS 128 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQV-----NKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 + ++ T GG + K++ ++ + P V Q + Sbjct: 129 KAFKSFLT--TDNVQGGRIAADGLAAAIKEMTGKEEGEIVILTNLPGVGSLEQRREGFLD 186 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 +I +HPG +++ ++G AT L ++ A L + A + QA K Sbjct: 187 QIKTKHPGLKVIADKYGDGQATTGLNMMTDLITANPKLVGVFASNLILAQGVGQAIAENK 246 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 DK+ ++GF + + +++ G + + D + G + A A+ K ++ Sbjct: 247 LGDKIKVIGFDSDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALAVSKGEKVEANVDTG 306 Query: 296 IKGVGQVEVSPNSVQG 311 V + ++ + Sbjct: 307 ANLVTKANMADPKIDA 322 >UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-binding protein n=3 Tax=Bacteria RepID=C3RLD7_9MOLU Length = 321 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 117/314 (37%), Gaps = 7/314 (2%) Query: 2 TLHRFKKIALLSALGIAAIS--MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 + L G + +R + FF N ++A + G Sbjct: 13 MMVFLCLCITLMIFGFYSYPDFKATVGQQRFGATYMTMNNPFFEVINNEIKKAVEANGDV 72 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + P V Q + I + ++Q +AI V+ + + LK A + + V+ D+ Sbjct: 73 LITLDPI-LDVDKQNEQILDLIDQRVDAIFVNPIDAKKIEIGLKAAKKAKIPVIVVDAPI 131 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 E + + G+L +D AK+ T + ++ IA Sbjct: 132 YDES-LVNCSIASNNYDAGVLCAKDM-MSKRDHAKIILLEH-ATAKSAVERIQGFLDTIA 188 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 ++++ ++ T + +LK D+D ++A + + A A E+++ D Sbjct: 189 SNA-NYQVINRADCDGQIEIAMPTMKQMLKETPDVDVVMALNDRSALGALAAIESMEIDN 247 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + G ++ + G ++ V+ G+++ A ALL+ ++ ++ ++ + Sbjct: 248 VLVYGVDGSPDVKELINTGLIQATAAQSPVKMGQLAYQKAKALLENKKIEKKIEVPVELI 307 Query: 300 GQVEVSPNSVQGYD 313 + +S + G+ Sbjct: 308 SRDNISNFELTGWQ 321 >UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL2_EUBSP Length = 321 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 110/321 (34%), Gaps = 16/321 (4%) Query: 2 TLHRFKKIALLSALGIAA----------ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQ 51 RF + L+ A+ ++ + I F K F + + A+ Sbjct: 1 MKKRFLGVLLVGAMVMSTVLTGCGNKKESKSGGEDKITIGFSSKTNSDTFVKAIADAAED 60 Query: 52 AGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 A KE GVD+ E V+ Q+ + Q +A+IV +G P + A + + Sbjct: 61 AAKEQGVDLIM-ADAEGDVNKQINDCETLIAQQVDALIVIPQDVEGSAPVVSMANEADIP 119 Query: 112 VLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWV 171 ++ + D + + ++ Q G ++ + +++ + Q Sbjct: 120 IIICNGDIADKNYTAFVGCTD--QESGEILGTWFNDNVEHGSQICIIEGPMGQSGQVGRY 177 Query: 172 KEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQ 230 + +E+++ Q +++ AE L Y D L AI+ + + A Sbjct: 178 AGFEEV--GMLDNFEVLSCQTANWKRDEAMALAEDWLTTYGDKLKAIVCENDDMAMGALS 235 Query: 231 AAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 A + V I G V+ G + L D QG+ +V VA ++ + Sbjct: 236 ACKAAGRTDVVIGGVDGLEDAIQAVKDGELGVSVLQDSAGQGEGAVEVALQIINGEDYQK 295 Query: 291 GDKLDIKGVGQVEVSPNSVQG 311 ++ + V G Sbjct: 296 DTRIPFHAITSDNVDAYLEGG 316 >UniRef50_A1STY3 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY3_PSYIN Length = 334 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 100/285 (35%), Gaps = 7/285 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY-DGPTEPSVSGQVQLINNFVNQ 83 Q IA + K + FF GA++A K+LG+++ E S+ Q+ ++ + + Sbjct: 51 QDKHTIALVMKTLTNPFFKEMERGARRAEKDLGINLLVKTAAQETSIQQQIGIVADLIEL 110 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE-----CRSYYINQGTPAQLGG 138 +A++++ L P LK A +G+ V+ D+ E +L Sbjct: 111 KVDALVIAPGDSVELIPILKHAQDKGIIVINIDNLLDQEYSKKVGLLNVPFISVDNELAA 170 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + +VA + A ++ +V T+ Sbjct: 171 YKSTKVLTEKLTQPTEVAIIEGIRGALNAELRKNGAIRAFSES-KFATLVATESANWKID 229 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 ++ + A + ++ AI + + ++ D V +V F V+ G Sbjct: 230 EAFELAAKLYNKNPNIGAIFCANDMMALGVIEYLQSTGKDNVQVVAFDAIPQALNAVQSG 289 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 + D +QG + A+ +L ++ K + ++E Sbjct: 290 VLLATVDQDAAEQGYQGILSANNILSGKKTPLKITIEAKIITKLE 334 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 101/287 (35%), Gaps = 11/287 (3%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQ 83 + I + + ++A +++ DV + + S QV + NF+ + Sbjct: 46 DSKYTIGMSQANLAEPYRVRMDEDIRKAAEKVPQFDVQFADAAK-DNSKQVSDVENFMTK 104 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 + +++S L +K+A G+ V+ D + E + YI Q+G + Sbjct: 105 KVDLLMISPNEAAPLTDVVKKAYNEGIPVVVLDRKVEGEAFTTYIG-ADNVQIGRQAGEY 163 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 + K+ T + K IA E+V T G + + Q Sbjct: 164 FKNTLLPQGGKIVQLKGLSGSTPAAEREKGFMEGIAG--SKIEVVDTADGEWERSVGQQK 221 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPN---VMRPYVERGTV 260 + +LKA+ D+ A+ A + A AA+ + VG VE+G + Sbjct: 222 MDALLKAHPDIQAVYAQNDPMAEGAWLAAQAAGRKDLKFVGIDGLPIESGGIKAVEQGRL 281 Query: 261 KEFGLWDVVQQGKISVYVADALLKK-GSMKTGDKLDIKGVGQVEVSP 306 L+ G+ +V A LL + L + V + + Sbjct: 282 SATNLYPTG--GEEAVEAARKLLIDCQPVPKEQTLPTELVTRENAAQ 326 >UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSL0_9FIRM Length = 389 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 13/308 (4%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTYDGPT---EPSVSG 72 A K + NG + ++ G ++ D + E G Sbjct: 83 GAITKSSDEYSFAGNVKAFENVVWQEIANGYEGFAEDATAAGCKLSVDTTSPMGESDEEG 142 Query: 73 QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132 Q+ ++ + V +G NA+++S +S P ++ A + + V +++ G Sbjct: 143 QLSILKDQVRKGVNAVLLSPISDANCLPGIEAAHEADIPVYAVNNEFNGADM----FVGP 198 Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQF 192 + G L + VA + + A ++V Q Sbjct: 199 NSLEQGQLAAEWVNEKLGGSGDVAIVMGMAKTAVTRNRTQGFEEWFADNDSDIQVVAKQN 258 Query: 193 GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL---KNDKVAIVGFSTPN 249 D +++ A LK Y DL AI + +A + N + ++G + Sbjct: 259 ADWDRSQAKDVAATFLKTYPDLKAIFCNNDVMALGVIEAVKEADLTLNKDIYVIGCDGQS 318 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 + + +G ++ V L ++ K + V Sbjct: 319 EAYDSIRANEMAATIDTFPYYEGYMAAEVCYRSLIGQTVPRVVFTPSKMLDSTNVDNTPE 378 Query: 310 QGYDYEAD 317 + + Sbjct: 379 ENIGWTDP 386 >UniRef50_C4G253 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G253_ABIDE Length = 376 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 17/325 (5%) Query: 21 SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNF 80 S + IA + K +F G + GK V+V GP + QVQL+ + Sbjct: 64 SNKAPSDWTIAVVVKDGTSDWFKRMQVGVDEFGKAKTVNVIQKGPANADAASQVQLVEDM 123 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 VNQG +A+ V + P L L++AM++G+ V++ ++ + + Y + T G + Sbjct: 124 VNQGVDALCVIPIDPGALESVLQKAMEKGIVVVSHEA-SDLKNTLYDVEAFTAEDFGNTM 182 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV-TTQFGYNDATK 199 + A+ + + + A + T T ++ K A + + ++ T A K Sbjct: 183 MQELAKAM-GESGQYAQMVAYTTSTTHMEYSKAEYAYQKENYKNMSLINDTVPSAESAEK 241 Query: 200 ---SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYV 255 + + A+ +LKA +L + + AQA E L DKV+IVG TPN R Y+ Sbjct: 242 VNTAYEKAKELLKANPELKGFTGAASVDILGEAQATEELGLTDKVSIVGVGTPNATRDYI 301 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 GT+ LWD G +A +L +K G L KG V + S Sbjct: 302 NSGTISAVCLWDPAAAGYAMCNLAYMILAGEEIKEGINLGQKGYESVTIQKGS------- 354 Query: 316 ADGNGIVLLPERVIFNKENIGKYDF 340 N +L +I K+NI YDF Sbjct: 355 ---NRCILGNAPLILTKDNINDYDF 376 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 113/312 (36%), Gaps = 7/312 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M R AL + + A + Q ++ I ++ + G A++ ++LG + Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + + + + I+ + AII+ + DG A+++A++ G+ V +++ Sbjct: 63 DVS-SHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEIN 121 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + G L + D A+ +P+ + + Sbjct: 122 QQG-LAEAQLVSNNAQGAALGAQQWIKSVGDSARYVELKGAPSDNNAATRSNGY-ETVLS 179 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DK 239 ++PG E V + D T+ + +L+A D+D +I+ + A A + D Sbjct: 180 QYPGLEKVGSDVANWDRTQGFNKTQSMLQANPDIDGVISGNDEMALGAISALKEAGKLDD 239 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSM---KTGDKLDI 296 V + GF V+ G + L V +++V +AD + G D Sbjct: 240 VVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYVTTGETGVDGEKQLFDC 299 Query: 297 KGVGQVEVSPNS 308 + V + Sbjct: 300 FLITSDNVDDYT 311 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 114/300 (38%), Gaps = 9/300 (3%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + + A+ AL A+ ++ + + F+ + GNG ++ K +++ Sbjct: 1 MKNLKRFTAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINLK 60 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 ++ Q+ I + + + +AI++S V G+ LK+A + + V+T D + Sbjct: 61 VSV-ANQDLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVDIGAEN 119 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 +I T GG++ A + K +V P ++ ++ + +A Sbjct: 120 SKIVSHI--ATDNYGGGVVAGKLAVKQLGGKGQVVMLSY-PGISSVEARLQGFRDAVADT 176 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 +IV Q G +S+ + +L+A D D I A + + A A K+ V Sbjct: 177 --DIKIVAVQPGK-TREESMTSTINMLQANPDTDLIFAFGDDMMIGAGLAVTKQKSKAV- 232 Query: 242 IVGFSTPNVMRPYV-ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 ++GF V E + D GK ++ V L +K+ + Sbjct: 233 VIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVADYLNGKEVKSEYPIVPVLYT 292 >UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VC4_BRAJA Length = 314 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 118/312 (37%), Gaps = 14/312 (4%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYD 63 +K+ L + A R +PK + FF +G + KELG ++ Y Sbjct: 4 TMRKLLLAGIAVAMMATPAFAANYRFVIVPKAMNNPFFDFARDGCLKRAKELGNIECVYK 63 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 GP E + Q Q+I +FV Q + + +S + +++ A G+ V+T+D+D Sbjct: 64 GPVEHEPATQAQIIQDFVTQKVDGLAISVADVAAMTKSIEAATAAGIPVITFDADAPGSK 123 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 R YI GT + G+ + ++ D K A P + + V + + Sbjct: 124 RIAYI--GTNNKEFGVALGKQLVKMRPDGGKYAMVSGGPGAKNLAERVDGVREALKG--S 179 Query: 184 GWEIVT--TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPA-------AAQAAEN 234 W V F +D ++Q + A DL AI+ + A A++ ++ Sbjct: 180 KWTEVAGSPTFCNDDPALAVQQMTDMRTATPDLAAIVPIGGWPMFAPEGFKAFASRNKKD 239 Query: 235 LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 + + K +V T + + G + G+ ++ A+ K + Sbjct: 240 IDSGKFTLVVADTLKMQLELLRDGYANALVGQRPFEMGEKAMDTLLAIKKGEKVPEIVYT 299 Query: 295 DIKGVGQVEVSP 306 + V + V+ Sbjct: 300 GLDLVTKDNVAQ 311 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 121/322 (37%), Gaps = 8/322 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVG--VGFFTSGGNGAQQAGKELGV 58 MT I +L +G+ S + +I +PK + F+T GA+ +E G Sbjct: 18 MTAGFVLLILILITIGVLQDSSQNKRTYKIIMVPKTIDESNDFWTGLIEGAKLGAEEFGC 77 Query: 59 DVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 ++ G +E GQ +LI + + +A +++ S A++ A+ G++V+ DS Sbjct: 78 EIEVVGSDSEDDYEGQNRLIEESIKKNPDAFLIAPCSYTHTTEAVQEAINAGIKVILVDS 137 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 E + + T G + A+ + K +K+ + + + Sbjct: 138 VIDKEIANGVV--ATDNFKAGKELGTFAKTILKPDSKIGVVAHVKGSSTATEREDGIREG 195 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 + ++ + + + + E +LK ++D +I + + AA+ + + Sbjct: 196 LGEDQNRIQ--DIVYCNSSYDLASDLTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGM 253 Query: 238 -DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 D+V +VGF +E G + + G + V A ++ M+ Sbjct: 254 EDQVKVVGFDNSVEQIQLLEAGVFQGIVIQKPFNIGYLGVEQAVKAIEGYPMEYNLDSGC 313 Query: 297 KGVGQVEVSPNSVQGYDYEADG 318 K + + + Q Y G Sbjct: 314 KLITKENMYEEENQRLLYSFSG 335 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 102/286 (35%), Gaps = 13/286 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELG---VDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 + + FF GA++ K++G V VT + ++ Q I NFV + Sbjct: 62 VGVTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVV-SSGYDLNQQFNQIENFVAANTD 120 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II++A G+ PA+ +A Q G V+ D+ + + T G + Sbjct: 121 LIIINAADSKGIRPAVDQARQAGKVVIAVDTAIEAD---IDATVTTNNVQAGEISCQYIA 177 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT-TQFGYNDATKSLQTAE 205 K K V P VT Q V +AK +P ++++ Q L+ Sbjct: 178 DRLKGKGNVVIVNGPP-VTSVIQRVDGCLKVLAK-YPDIKLLSKDQNAEGSRDGGLRVMS 235 Query: 206 GILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT--VKEF 263 +L + +DA+ A + + AA K IVG + G Sbjct: 236 DLLVTFPKIDAVFAINDPSGVGVDLAANQAKRQDFFIVGVDGAPEAIEAIASGDSLYAAT 295 Query: 264 GLWDVVQQGKISVYVADALLKKGSMK-TGDKLDIKGVGQVEVSPNS 308 + + ++ V + +L + + K + + VS ++ Sbjct: 296 ATQNPRGMTQTAIQVGNDILHGKKPESPNILIPAKLITKENVSTST 341 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 113/292 (38%), Gaps = 3/292 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A +AFI + G F+ + G + +LGV V G + + Q +++ Sbjct: 55 AAPTKAGKDYNVAFIQGVAGDEFYITMQCGIEAEAAKLGVTVNTQGGQKFDPTLQTPILD 114 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 + V +AI+++ + L+ A G++V+ D+ T+ + + + GG Sbjct: 115 SVVASKPDAILIAPTDVTAMQRPLENAAAAGIKVVLVDTTTE-DPSFAVSQVSSDNEGGG 173 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 A + N + KV + P ++ + VK + + K+ ++ + Q+ +ND Sbjct: 174 AAAFKAIKDKNPNGGKVLVISTDPGISTVDARVKGFEDAVGKD-STFDYLGVQYSHNDPA 232 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVER 257 + Q L+ D+ I A + + ++ + D++ IVGF ++ Sbjct: 233 TAAQLVTAALQKDPDIVGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPNQVKALKD 292 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSV 309 GTV+ G + A A L G++ + + V + Sbjct: 293 GTVQALVAQQPATIGTDGLDQAIASLDGGTITPKIQTGFTIITADNVDSSDA 344 >UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F3L8_THELT Length = 321 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 13/311 (4%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG--VDVTYD 63 +K L+ A+ +S V A IAF+ K F+ GA+ A +L V VT Sbjct: 1 MRKFLLVLAMVFT-LSALVFGAYEIAFVVKATDSDFWQYTIVGAKNAEHDLQGLVKVTVY 59 Query: 64 GP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 GP +E + QV ++ + + +AI++S+ S PAL +A Q+G++++ D+ Sbjct: 60 GPPSEADIDKQVAILEDVIRTKPDAIVISSTSSHATAPALNKAYQQGIKIILIDNFVYDT 119 Query: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKD-----KAKVAFFYSSPTVTDQNQWVKEAKAK 177 ++ T ++GG L ++ K K KV S V A+ Sbjct: 120 GYHSFL--ATNNKVGGGLAAEKVVELLKKSGRPLKGKVGLISSMAGVQVLIDRDDGFTAR 177 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENLK 236 + + P EI+ T++ ND K+ AE ++ AY D L AI A + + A+ E Sbjct: 178 LKELAPDLEILPTRYVDNDIAKAAAAAEDLITAYGDQLVAIFADNNHTGDGVARVIEEQN 237 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295 DKV V + + + G++K + D G V A + ++ + Sbjct: 238 LQDKVIAVAYDSDPQEVEALRNGSLKALIVQDPHGMGYKGVMFAFMAINGETLPSYFDTG 297 Query: 296 IKGVGQVEVSP 306 + V + + Sbjct: 298 VYVVTKENMDN 308 >UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacteria RepID=B2T1S7_BURPP Length = 339 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 103/319 (32%), Gaps = 17/319 (5%) Query: 8 KIALLSALGIAA-------ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 +AL G+A + + ++ F + + + + G + Sbjct: 24 LLALAIGFGVATAHADDALPKLASKTPLKVGFAQTESNNPWRLAETKSFKDIAAKCGWQL 83 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 S S QV I N + Q + ++ L P + +A + G+ V+ D D Sbjct: 84 VMTD-ANSSNSKQVSDIQNMIAQHVDLLVFPPREEKPLAPVVLQAKKAGIPVILVDRDVD 142 Query: 121 PE----CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 R Y G+ G + KAK+ + + N K Sbjct: 143 QSVAKAGRDYITFIGSDFIDQGHRAADWLVKATGGKAKIIELEGTTGASAANDRKKGFDE 202 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 IAK PG I+ +Q G K Q E +L+A+ D+ A+ A + A A + Sbjct: 203 IIAKN-PGMTIIASQSGDFARDKGRQVMETLLQAHPDVTAVYAHNDEMALGAIAAIKAAG 261 Query: 237 N---DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 + IV + G + G ++ VA K + T K Sbjct: 262 KQPGKDIQIVTIDGTKGGMDAIAAGELGASVQSSPF-FGPLACDVAQRYAKGEKIPTWVK 320 Query: 294 LDIKGVGQVEVSPNSVQGY 312 + K + V N GY Sbjct: 321 VSDKFYDKSNVQQNMQYGY 339 >UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY05_9FIRM Length = 329 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 98/310 (31%), Gaps = 5/310 (1%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64 +++ + + ++ I + + +F + + G + Sbjct: 24 TICIVSIALLFFSRNKNESEKSKRTIGALYMTMNNPYFEVINEEIKAVVESKGDVLETRD 83 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 Q + + F+ + + I+++AV + +L++A + G+ V+ D+ Sbjct: 84 SG-MDAKVQAKQVEKFIEEKVDCILINAVDWKKIGSSLEKAKKAGIPVIAVDALIYNRSF 142 Query: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 Q G ++ K K+ F S +K K + K Sbjct: 143 VDGTVVSNNYQAGEQCAKDLMKRR--KKGKILFLVQSE-NKSAIDRIKGFKETLEKAGWK 199 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIV 243 +E V S E +L D+D ++A + + A A + V + Sbjct: 200 YENVGELECQGQLELSQPLVEKVLNKTKDIDVVMALNDPSAMGAMAALDAEHMLSDVLVY 259 Query: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 G + + + GK +V + +L + + + + + Sbjct: 260 GADGSPEAKTMIYENKMAATSAQSPRTTGKKTVEMLYKILDGKKTEKQCIVPVSLITKDN 319 Query: 304 VSPNSVQGYD 313 ++ S+ G+ Sbjct: 320 INDYSLSGWQ 329 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 105/285 (36%), Gaps = 10/285 (3%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQGYNA 87 +IA + + ++ + +GA GK+ GV V G +E +G+ I+ QGYN Sbjct: 21 KIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGYNC 80 Query: 88 IIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-----RSYYINQGTPAQLGGMLVD 142 V V+ + L QR + +L D+ SY G+ G Sbjct: 81 FGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQAG 140 Query: 143 MAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQ 202 ++ K +VA + K K+A + +IV TQ D K Sbjct: 141 EGLLKLMGGKGEVAILQGIAGEQNGINRQKGFTEKVAGK---LDIVATQPADYDQAKGQT 197 Query: 203 TAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVK 261 E ILKA+ + I A + AAQA N KV+I+ + V+ GT+ Sbjct: 198 VTEAILKAHPKITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAVKAGTLS 257 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 +G+++V L+ K + + I + V Sbjct: 258 GTISQYPYAEGQLAVQACIDLVAKKKVPSRIVAPIALIDSTNVDK 302 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 103/296 (34%), Gaps = 11/296 (3%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLI 77 ++ S + + F + + QQ+ E GV+ Y ++ V I Sbjct: 40 SSGSKEIGPDLTVGFAQSGNPNPWMVALTESMQQSADEYGVNYIYTD-ANDDMATHVANI 98 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 + + + + ++++ + GL L A ++GV V+ T+ E Y + Sbjct: 99 EDMLAKDLDILVIAPMEDTGLEAVLDEAAEKGVPVILSARTTQGE---YVTTVYSDQAWE 155 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + D AKV + K + +A+++P EIV Q Sbjct: 156 GERCAELIGEKIPD-AKVVELRGIEGTSSVAGREKGFRDVMAEQYPDMEIVVEQTANFSR 214 Query: 198 TKSLQTAEGILKA-YSD-LDAIIAPDANALPAAAQAAENLK---NDKVAIVGFSTPNVMR 252 +++ IL+A D +DA+ + A QA ++ + + +VG Sbjct: 215 QEAMDAMANILQAKGPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAW 274 Query: 253 PYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 V+ G + G V +L +++ + + + + V + Sbjct: 275 ELVKSGEMLGTVQCSPKH-GPTVFEVIQKILDGETVQKETIVPDQVITKENVDESE 329 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 97/280 (34%), Gaps = 5/280 (1%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 ++ + F N + K G+DV + + + Q+ +N ++ AI Sbjct: 70 KVIYANHNDDDAFAMQLKNTFAEKAKSAGLDVEFLD-AKGDSNLQIDQLNEAISNKAAAI 128 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQV 148 ++ A+ + P +++A + G+ V+ + D I + + G + Sbjct: 129 VLLAMDGTSIVPTVEKAREAGIPVVIMNRDVNDPKV---IGSLSDDREAGRMQGEFMASH 185 Query: 149 NKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGIL 208 AKV + +++ + + K + P +++ + G + ++ L Sbjct: 186 LPPNAKVVYLMGESSLSVAVKRWEGFKEACLDKRPDVKLLASVDGSWSKAEGMKAMTLWL 245 Query: 209 KAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWD 267 + +++ ++A + A QA + + + G VE G + + D Sbjct: 246 SFFPEINGVVAANDEMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGELSQTVKQD 305 Query: 268 VVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 Q +V + L + + + + V+ Sbjct: 306 AEGQAAGAVTLVQGFLSGKAPTESLDIPFTSITRENVAQF 345 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 99/284 (34%), Gaps = 8/284 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLINNFVNQG 84 ++ + K + F+ GA+QA ELGV++ G E V Q+ LI+ + G Sbjct: 34 DKPKVLLVMKSLVNPFYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQLAAG 93 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS-----YYINQGTPAQLGGM 139 +A++++ + P L RA + GV+++ D+ + GG Sbjct: 94 IDALVIAPADSIAILPVLIRANELGVKIVNIDNRIDTNAIQRAGLPAIPFVSVDNEFGGY 153 Query: 140 LVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATK 199 ++ AK + + + A+ + + E+V ++ Sbjct: 154 EAGKILAELAGPDAKALIIEGPRSAINARERRDGARRALQEN--NIEVVASEVASWKLES 211 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGT 259 + + + +L+ I A + A A+ + I GF R V G Sbjct: 212 AYALTQNVHARNPELNVIFAANDMMALGALLYAQEHGLNDWLIAGFDNIPDARAAVREGR 271 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303 + +QG V A LL ++ + + + + Sbjct: 272 LAVTIDQQADRQGYQGVATAVDLLNDKAVDDVVLVKTRVITADD 315 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 111/310 (35%), Gaps = 9/310 (2%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 L F + + L +A + E IA K +F + GA+ A K +G V Sbjct: 3 KLKLFGVVLPAALLATSAFAA----DETIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVV 58 Query: 62 YDGPTEPS-VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 + PT+P + Q+ I + + + +AI+ V + P +++ + V+ + Sbjct: 59 HYIPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSA 118 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 ++ G G+ + K V V+ + + Sbjct: 119 GGKFLAFV--GADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNVDRVRGFNDALKE 176 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 +++ +Q + LQ E +++++ +D ++A + A +A + K Sbjct: 177 -FKDVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANR-KA 234 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 +VG + ++ G + G ++ QG I VA L+K ++ L V Sbjct: 235 KVVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETIVNEVVLKPTVVN 294 Query: 301 QVEVSPNSVQ 310 P V Sbjct: 295 ASNYKPYDVP 304 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 100/300 (33%), Gaps = 6/300 (2%) Query: 10 ALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEP 68 A + G ++ I + F + N ++ +E + ++ Sbjct: 49 APAAGNGEEGPGGTSGEPAEVSVIIETFDNTFASFVMNAMKKYEEEHKDKIHITYLDSKQ 108 Query: 69 SVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI 128 + Q+ + N + G AII AV P ++ + GV ++ ++ + Sbjct: 109 DANTQISQVENQILNGTQAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFEN----CDS 164 Query: 129 NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIV 188 G + G L+ + K VA +Q + + +P ++V Sbjct: 165 FVGADGAVAGSLLARFTGEKTGGKGNVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVV 224 Query: 189 TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFST 247 G K+LQ E L++ +D+DAI+ + + A E D + + G + Sbjct: 225 IEGAGDWKRDKALQLVETWLQSGTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNG 284 Query: 248 PNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 V G + + +Q + ++ A + ++ + + V V Sbjct: 285 DPDGINAVRDGKIAATVFQNPDRQAEEALEAALQYIHGEKPESKIMIPFELVTADNVDDY 344 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 105/300 (35%), Gaps = 8/300 (2%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 + A +I F + F+ GA+ A K G ++ + V+ Q I + Sbjct: 26 TPVAHAAGLKIGFSQVTLQSPFYVQLKEGAEAAAKAGGDELIFLD-ANGDVNKQNNDIQD 84 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 + + + +I++ V+PD + PA+ A + GV V+T D + ++ + ++G Sbjct: 85 LLTRKVDVLIINPVNPDAVKPAIAAAQKNGVPVITVDRSINGGGVTAHLGR-DNVKMGKA 143 Query: 140 LVDMAARQVNKDK---AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 + D ++ K KV T + G++IV + Sbjct: 144 VGDAVLAELKKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALKG--SGFKIVAGPYAEYT 201 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE 256 ++ + +L+A+ D+ + A + + A + V + G + + Sbjct: 202 RANAVTAMQDLLQAHPDVKVVYAHNDDMAMGALKVLAEAGKKDVFVAGVDGLSEALASMA 261 Query: 257 RGT-VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 G L D G ++V A A+ + K V + V G E Sbjct: 262 GGDQYVATALNDPRYLGDMTVQTARAIKAGKKVPAFVDAGTKAVTKANVGEFKRTGLFAE 321 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 119/335 (35%), Gaps = 31/335 (9%) Query: 3 LHRFKKIALLSALGIAAISMNV--------------QAAERIAFIPKLVGVGFFTSGGNG 48 + +L+ G A+ + + +I + + ++ S G Sbjct: 1 MFSLSAACVLALAGCASGAEQAGDVAADGGETTFEAKDPLKIGYSVYDLQNPYWQSYAAG 60 Query: 49 AQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQR 108 + +E G++V + S QV + +NQG +A+I++ V P L + A Sbjct: 61 VRAGAEEAGIEV-VIADQKSSQQEQVSGSLDLINQGISALIITPVQPSALPSTIDAAHGE 119 Query: 109 GVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM-AARQVNKDKA--KVAFFYSSPTVT 165 + V+ D T+ + Y + + GG L ++ +V Sbjct: 120 KIPVVVADIGTEGDYDGYIL---SNNYEGGRLAAEHVVEKLGGTPGPHQVGVIELHAGSV 176 Query: 166 DQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANAL 225 + V ++ +E +EIV++ G + A+ +L A +LD I A + ++ Sbjct: 177 VGEERVSGFVDRLGEEE-NFEIVSSLDGNDTVDGGFTAAQDMLSANPELDVIYAANDDSA 235 Query: 226 PAAAQAAENLK---NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADAL 282 A++A E + ++GF + +E+G + D QG+ +V A AL Sbjct: 236 VGASRAMETAGVSVANGFTLIGFDGSDPALDLIEQGVMSGTVAQDPFGQGQKAVETALAL 295 Query: 283 LKKGSM------KTGDKLDIKGVGQVEVSPNSVQG 311 L ++ V V+ Sbjct: 296 LNGEDPGYSDEATKTIYFPVEMVTAENVAEFRASR 330 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 101/318 (31%), Gaps = 12/318 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER-----IAFIPKLVGVGFFTSGGNGAQQAGKE 55 M + L AL A S N + I F + K Sbjct: 1 MRKVTYLMTTLAIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKT 60 Query: 56 LGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 LG + S Q+ I + QG + II++ L P L+ A++ G+ V+T Sbjct: 61 LGNVKIIRSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVTI 120 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 D N +G A ++ A + P N K Sbjct: 121 DRPVNGVP-EVIANVAADNLIGAQRQGEAVEKLFPQGATIINLQGIPGDKTANDRSKGVH 179 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILK--AYSDLDAIIAPDANALPAAAQAAE 233 + K ++ V Q + + L E +L A I+A + ++ AAQA E Sbjct: 180 DTLDKHPELYKFVAEQTARFNRDQGLSVTENLLTGLANP-PTVIVAGNDDSALGAAQAVE 238 Query: 234 NLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 K+AI G+ V G + +QG+ +V + ++ G+ Sbjct: 239 ARGLKGKIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKILTDYIRTGARPATV 298 Query: 293 KLDIK--GVGQVEVSPNS 308 + + + ++ Sbjct: 299 DVLVSPVAITSKNLNDAE 316 >UniRef50_C8WTL4 ABC transporter, solute-binding, sugar transport n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTL4_ALIAD Length = 352 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 121/317 (38%), Positives = 176/317 (55%), Gaps = 17/317 (5%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 ++AFIPK +G+ +FT GAQ +L + +TY+GPT+ S + QV +IN++V QGY Sbjct: 51 KPIKVAFIPKEIGIPYFTGADQGAQSVAPKLHIQLTYNGPTQASAADQVSMINSYVAQGY 110 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA 145 N I VSA P L PAL+ AM+RGV+V+TWDSD P R ++++Q T +G LV + A Sbjct: 111 NVIAVSANDPTSLAPALESAMRRGVKVITWDSDVIPSARQFFVDQATAQGIGTTLVQITA 170 Query: 146 RQVNKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 K +V S+PT +QN W+ K I ++ IVT Q+ L A Sbjct: 171 EHFKSQKNVEVGILSSTPTNPNQNAWIAVMKQAIQSKYKNLHIVTIQYDQEQPDVGLTAA 230 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEF 263 E +L+AY + AII+PD+ +PAAA+A E L KV + G + P M+ YV GTV+EF Sbjct: 231 ENMLRAYPQMKAIISPDSVGVPAAAEAVEKLGLKGKVFVTGLADPIQMKQYVNDGTVQEF 290 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVL 323 LWDV + G +++YVA A++ + + G + + VQ N +VL Sbjct: 291 VLWDVPKLGALTMYVARAVVDG-------TMPVNGTFKCALGSFKVQ--------NRVVL 335 Query: 324 LPERVIFNKENIGKYDF 340 L IFNK NI ++ Sbjct: 336 LGNPTIFNKSNINNANY 352 >UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET05_9FIRM Length = 336 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 105/298 (35%), Gaps = 8/298 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQL 76 AA + IA + F +GA++ ELG + ++ + Sbjct: 43 AAAAQGEGKDGYTIAVLAWSQAEEFGVDIISGAEKKAAELGNVTVVKPDPAGDMQKEIAI 102 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + + + QG +AI V+ V + + P + + + G+ ++ +D DT+ + + Sbjct: 103 LEDLIQQGVDAICVAPVDANAIVPYIDKVREAGIVLVDYDIDTEAQ---CDAKVLSDNAA 159 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 GG + Q + KV P VT + + K ++A+ P E+V Q Sbjct: 160 GGAMAADYLVQEMGTEGKVLILTEVPGVTTAEERIAGFKDRMAEIAPNVEMV-EQLSNGT 218 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVE 256 T E +L+A+ D+ I + A A + V I G+ ++ Sbjct: 219 RDTHRATTENMLQAHPDITGIFCFMGDNSLGAYTACKTNNRQDVLIAGYDATPEQLDIMK 278 Query: 257 RG----TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 + + G +++ A +L+ + ++ + + + Sbjct: 279 NDGPDCNLICSVALYPKKIGYVALETAYNILEGEEINDVVWTELGLLTAKDADSFEAE 336 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 112/311 (36%), Gaps = 9/311 (2%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 + K+I L++ALG + + E I F T + + K G+ V + Sbjct: 1 MKYLKRIVLVAALGCSTSVLA----ETIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF 56 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 + V Q + NF++ G +AIIV V+ G K + G+ ++ + Sbjct: 57 ED-ARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVNRTPGDS 115 Query: 123 CRSY-YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + G+ + G L ++ + VA + T Q K+ + +AK Sbjct: 116 KLPAGVVFVGSDEKQSGTLQMEELARLANYQGNVAVMIGNLTDAGALQRTKDVEQVVAK- 174 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DK 239 +P ++V Q ++ + + +D + A + A A + K Sbjct: 175 YPKMKVVQKQSANYSRSEGMDLMLNWITNGESIDIVAANNDEMAIGAIMALQQAGKQGSK 234 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + G + G ++ D V QGK SV VA ++K + + + V Sbjct: 235 VLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKLDPYYWIPFELV 294 Query: 300 GQVEVSPNSVQ 310 + + + Sbjct: 295 TPANMQKYAAK 305 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 124/315 (39%), Gaps = 11/315 (3%) Query: 8 KIALLSALGI-------AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + L++A G + + N ++++A +P + F+ S GAQ+ K+LG ++ Sbjct: 16 AVMLVTACGTGQIGQSGSGSAANSANSKKLALVPGVQAEPFYISMQCGAQEEAKKLGYEL 75 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T P + + Q ++N+ + A++V+ + +++ RG +++ D+ K Sbjct: 76 TVQAPQKFDATMQTSIVNSLGSNPPAALLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSLK 135 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDK-AKVAFFYSSPTVTDQNQWVKEAKAKIA 179 + + + GG L ++ DK V + + K + ++ Sbjct: 136 -DKSVAVSSVSSDNAEGGKLAAQTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDEL- 193 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-D 238 K HP + V QF N+ ++ L + DL I A + N AA N Sbjct: 194 KNHPNLKSVGIQFTQNEPEQAASKVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIG 253 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 KV +VGF +++G + D Q G V A A L+ + + Sbjct: 254 KVNLVGFDASPSEVDGLKKGEYQALIAQDPAQIGTKGVDQAVAALEGKPTERDLTAQLHS 313 Query: 299 VGQVEVSPNSVQGYD 313 + + ++ NS Y Sbjct: 314 ITKDDLDANSKYFYK 328 >UniRef50_UPI0001B54FB6 ribose ABC transporter, substrate-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FB6 Length = 337 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 138/326 (42%), Gaps = 14/326 (4%) Query: 16 GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQ 75 +S + +IAF+PK+ G+ +F + G A + LG + P + Q Sbjct: 25 CSPVLSDSAPEPAKIAFVPKIGGIPYFDAMNAGGMLASRRLGAKWSLHAPASLDPAAQTA 84 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 ++ + + + I V+ P L P + A ++G+ VLT D+D R ++NQ T Sbjct: 85 ILRQLIAERVDVIAVAPNDPAELAPTIAEAREKGIHVLTTDTDAADSQREVFVNQTTADG 144 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 +G LVD ++ + A + N W++ K A+ +P ++V T + Sbjct: 145 IGSALVDSLMKK-TDGAGEYAIVSCGRAAANLNSWIEAEKTYAAQRYPQAKLVETVYAGE 203 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE-NLKNDKVAIVGFSTPNVMRPY 254 D T + + A+ IL + L +I A P A+A K +V VG TP M+PY Sbjct: 204 DTTTATKLAKEILNRHPKLTGMIGQCTTATPGIARAVRDQQKIGQVFTVGTGTPQTMKPY 263 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 + G+ LW+V G ++ + A+ L ++ + + + + Sbjct: 264 LVDGSCSMTVLWNVESLGYLTAWTAEQLATGTPLRPKNNVSPEL------------PAVH 311 Query: 315 EADGNGIVLLPERVIFNKENIGKYDF 340 VLL + ++ + N+ ++ + Sbjct: 312 YDAATRTVLLGDPLLITQNNVDQFKY 337 >UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK8_9CLOT Length = 329 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 103/292 (35%), Gaps = 4/292 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 +I I + ++ GA++A K+ + + GP S ++ IN + Sbjct: 39 KPKITLISHVYSNPYWKYIKLGAEKAAKQRNAVIDFQGPDTASAGEGIKFINMAYAAKVS 98 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II P + + + G+ ++T DSD + R Y+ GT G + Sbjct: 99 GIITYVQDEAMYKPVIDKVLAGGIPIVTVDSDAENSKRLAYV--GTDNVTAGRVGAKEMI 156 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 V V +Q + V I I + + ++ + Sbjct: 157 HHVGIYGNVGIIMGGKNVKNQIERVNGFTEYIKSN-SKLNISEIESSDSYLLEAELATKK 215 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL D+ A+ A AA+A ++ +KV I+ F Y++ GT+ + Sbjct: 216 ILINNKDIKAVFCTSALDGQGAAKALISMGAAEKVKIICFDDLPETLDYIKNGTITSTIV 275 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEAD 317 D G +V + +++ K D+ V + + +Y+++ Sbjct: 276 QDPYGMGYKAVNIIMDIMEGKDTKGVFLTDVIVVSKDNIDEFKKTRGEYDSE 327 >UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGQ4_PETMO Length = 342 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 104/298 (34%), Gaps = 8/298 (2%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD-GPTEPSVSGQVQLIN 78 + I FI K F+ +GAQ+A GV+ + +E VS QV ++ Sbjct: 36 PKAIQSSDMTIFFIVKASENEFWQIVLDGAQKAANHFGVEFIHQEATSESEVSRQVSILE 95 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 ++ +AI+++ D L P ++RAM G+ V+ DS + ++ G+ G Sbjct: 96 TAISTNPDAIVLAPTVADALVPGIERAMDSGIPVIIIDSMANTDNYVSFL--GSDNYTIG 153 Query: 139 MLVDMAARQVNKDK-----AKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFG 193 + ++K KVA V + +I + +P E+V+ + Sbjct: 154 QRSADELAKALEEKNGSPSGKVAAITYMSGVGSLEARISGFLDRIEEAYPDIEVVSVRDA 213 Query: 194 YNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRP 253 ++ +L AY DLD + A + +A + + +A V Sbjct: 214 MGQVGNTINITLDLLTAYPDLDGLYANNQMTGDDMVRALDMQGRNDLAAVAVDASAQEIW 273 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 +E G + + G V A + I + ++ Sbjct: 274 GLENGYLDSVLVQQPWVMGYAGVAYAVMARNGVPLAKNVDTGILVITPESLASGEADA 331 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 114/304 (37%), Gaps = 10/304 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M +I I F+ + + ++ + V + Sbjct: 1 MFRKSLSRILFSGVALAMMAGAASAEG--IGASLLTQQHPFYIALADAMKKEAQAENVPL 58 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 +S Q+ + +F+ +G + II+S V G+ A+ +A + G++V+T D Sbjct: 59 EVSI-ANQDLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPAN 117 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + ++ GT GG + +K VA PTV ++ K IAK Sbjct: 118 NVDVTSFV--GTDNFAGGEKAAELMAKTIGEKGNVAVIDY-PTVQSVVDRIEGFKKGIAK 174 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDAN-ALPAAAQAAENLKNDK 239 +P +IV Q G ++L A+ IL+A D+ I + AL AA+ ++ Sbjct: 175 -YPDIKIVAIQPG-ITRPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLENQ 232 Query: 240 VAIVGFSTPNVMRPYVERG-TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 V ++GF R V+ + Q GK++V A ++K + + Sbjct: 233 VKVIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEVPAKQPIVPGV 292 Query: 299 VGQV 302 V + Sbjct: 293 VTKD 296 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 103/302 (34%), Gaps = 10/302 (3%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQ---QAGKELGVDVTYDGPTEPSVS---GQVQ 75 + V+ ++ I K F+ + NG + + K+ GVDV+ S GQ Sbjct: 67 VKVKGGLKMGAIAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQT 126 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 + +N VNQGYNA+++S +S L ++ A + + + + G A Sbjct: 127 MTDNLVNQGYNALMLSPISDSNLTASVDNAKGKKIPTINVNDGLIASADY---FVGPDAY 183 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G L + DK VA + K I + G +V Q Sbjct: 184 QNGELAAEWVSKQLGDKGDVAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQNADW 243 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYV 255 D K+ + A ++ DL AI + + +A E K D + +VG + Sbjct: 244 DRQKAKELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKKD-ILVVGVDGIGEAYDSI 302 Query: 256 ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYE 315 G + +++ V +L + + + V ++ + Sbjct: 303 RAGKLDATVDSFGYYMSQVATEVTLRVLAGQDIPRVTHTPQALIDKTNVDKDAKDIIGWT 362 Query: 316 AD 317 Sbjct: 363 DP 364 >UniRef50_A3DI69 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Clostridium RepID=A3DI69_CLOTH Length = 372 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 10/288 (3%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKEL---GVDVTYD--GPTEPSVSGQVQLINNFV 81 + +I K + ++ + G A KEL GV V Y+ GP +P QV I + Sbjct: 79 SYKIYCTYKNI-HAWYDAIKCGIDAAVKELAEKGVTVDYEWYGPAQPDAVDQVNSIETAI 137 Query: 82 NQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD-SDTKPECRSYYINQGTPAQLGGML 140 QG++ I V P+ A+ A+ +G+ V + SD R++++ P G L Sbjct: 138 GQGWDLIAVDVNQPELTGEAINNAVAKGIPVAVFGTSDVPNCDRAFFVGNTDPYGDGCAL 197 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 A + K ++A + + ++ K IAK +P EIV Q ++ K+ Sbjct: 198 A-KAVCEKMGGKGQIAILAGTIGALAHEERLRGFKDTIAK-YPDIEIVDEQRDNDEVEKA 255 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGT 259 + E L+AY +L I+ + + A QA + K+ I G ++ GT Sbjct: 256 ISITESWLQAYPNLGGILCNNMSNPVGACQAVADAGKSGKIVIGGMDHDLRALNALKDGT 315 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 + + + G +Y A + ++ + V + Sbjct: 316 LYVAQVQNCYDMGYKLIYNAIKTIDGEKVEESTAVGSTSVYAQDADKF 363 >UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P063_9CLOT Length = 326 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 97/288 (33%), Gaps = 6/288 (2%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 + + F+ N + ++ G + P Q + I V + + Sbjct: 44 KKLFGATYMTMNNEFYKIVNNQIRMQVEKNGDQMITLDPA-LDQKKQNEQIKQLVKRKVD 102 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 AI ++ V + P L A + + V+ DS + G + + Sbjct: 103 AIFLNPVDWKAVEPGLVAAKKAKIPVIVIDSQVYRSDLVAMTIVSDNYKAGVLCAKEMMK 162 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 Q KD+A + + + I K + ++I+ + ++L + Sbjct: 163 Q--KDQANIVLLTHNA-ARSAVDRINGFLDTI-KNNKNYKILASADTQGQIERALPKVDK 218 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 I++ Y ++D ++ + A A A ++ + V + G + ++ G + Sbjct: 219 IIEEYQNIDVVMGLNDPAAMGALAALDSKGAREGVLVYGIDGSPEGKKLIKEGMMTGTAA 278 Query: 266 WDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 Q +V A +L+ ++ + ++ + + V + + Sbjct: 279 QSPKQMADTAVNAAYQILQGEKVEKKKVISVQMITKKNVEQTDISRWQ 326 >UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and transport protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C56B8 Length = 349 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 130/340 (38%), Gaps = 21/340 (6%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG---- 57 + L + L IA+ I IPK + + S GA++ +L Sbjct: 1 MARVHLYLLLAAVLPIASGCARRGEEYTIVVIPKGLSHEHWQSVRRGAERCAADLEAEDG 60 Query: 58 --VDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 V V +DGP E Q+++++ V G +A++++ + +KRA GV V+ Sbjct: 61 TRVRVIFDGPLRERDALEQIRIVDRRVATGASALVLAPQHSATMTACVKRAADAGVPVVI 120 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVD----MAARQVNKDKAKVAFFYSSPTVTDQNQW 170 DS + T GG L ++ KDK K+ F + Sbjct: 121 IDSGLDDPN-HFVKYVATDNYNGGRLAGRHLIRELQRRRKDKPKLILFRYAVGSQATEDR 179 Query: 171 VKEAKAKIAKEHPGWEIVTT-QFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAA 228 + + ++ + PG E ++T ++ +++ A ++ + + +D I AP+ ++ Sbjct: 180 ERGFEDEVKERCPGAEWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNESSASGT 239 Query: 229 AQAAENLKND-KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 A + KVA++ F + +++G V L D + G +S + L+ Sbjct: 240 ADVLRAQGLNQKVALMAFDGSKPLLQSIQQGDVIGSILQDPYRMGYLSAWYCVRHLRGED 299 Query: 288 MKTG-----DKLDIKGVGQVEVS-PNSVQGYDYEADGNGI 321 M G + + V+ ++ YD EA Sbjct: 300 MNNGRREMSEGTGEYLITAENVTSAFTLGLYDPEAQARRT 339 >UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU3_9FIRM Length = 325 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 128/318 (40%), Gaps = 8/318 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPK--LVGVGFFTSGGNGAQQAGKELGV 58 +T+ A++ GI + +IPK F+TS +G + A +E Sbjct: 9 ITVAILMAAAVVIFAGILKPEATQTKKCSLIYIPKIRDNTNDFWTSVISGCKMAAEEYES 68 Query: 59 DVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 D+ P E ++ Q +L+ + Q +AI+ S S D LK A ++G+R+ DS Sbjct: 69 DLEILAPDKEENIEEQNKLLKKAIEQKPDAILFSPSSMDSSDELLKEAKEKGIRITYIDS 128 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 TK + + + T G ++ AR++ +K+A V+ + + + Sbjct: 129 YTKEKLQD--LTVATDNVNAGRMLGEYARKLIDKDSKIAIVSHVKGVSTAVEREQGFREG 186 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK- 236 + ++ IV + + KS + A+ +++ Y DL+ I + + +A + Sbjct: 187 L-GDYAD-NIVDIVYCNSLYEKSYELAQELMRKYPDLELIAGMNEYSAVGVGRAVSDAGA 244 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 DK+A+VG +E G K + + G I V +L +++ Sbjct: 245 KDKIAVVGVDCSQEAINLMEMGVYKGIIVQKAFRMGYIGVEETIHMLNGDAVEKNIDSGC 304 Query: 297 KGVGQVEVSPNSVQGYDY 314 + V + + ++ + Sbjct: 305 ELVTPENMYNSDIERLIF 322 >UniRef50_C5EKT6 Sugar ABC transporter n=2 Tax=Clostridiales RepID=C5EKT6_9FIRM Length = 326 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 136/325 (41%), Positives = 181/325 (55%), Gaps = 13/325 (4%) Query: 29 RIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 +AFIPKL G FF S NGAQ+ KE G V Y G +V+ QV +INN + G +AI Sbjct: 2 TVAFIPKLTGNAFFESANNGAQEYSKEWGFTVDYQGSANAAVADQVNVINNAIASGVDAI 61 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAA--- 145 VS+V GL AL A GV V+TWDSD R+ ++QGTP LG MLVDM A Sbjct: 62 CVSSVDATGLDSALTEAKDAGVTVVTWDSDVSDTARTLMVSQGTPDLLGKMLVDMGADSL 121 Query: 146 ----RQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT--QFGYNDATK 199 + V D K + YS TV DQN W +A I + P WE V + DA K Sbjct: 122 TNRGKDVKADTIKYCWHYSQATVADQNSWQVAGEAYIKENFPNWENVAPDNYYSEQDAEK 181 Query: 200 SLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK--NDKVAIVGFSTPNVMRPYVER 257 ++ IL+A+SD+D II D+ ALP +AA+N D V I GF++P ++ Y Sbjct: 182 AVSIGASILEAHSDIDLIICNDSTALPGQCKAAQNKGLTKDDVTITGFASPMSIKDYCAA 241 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS--VQGYDYE 315 G ++++GLWD QG + Y+A L + GDK+DI +G+VEV PN V+G Sbjct: 242 GVIEQWGLWDCGVQGAMGCYLAAYLAAGNEVHVGDKIDIPSIGEVEVMPNDCLVEGASTA 301 Query: 316 ADGNGIVLLPERVIFNKENIGKYDF 340 NG+VLLPER +FN +N+ Y+F Sbjct: 302 EVNNGVVLLPERTVFNADNMNDYNF 326 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 119/318 (37%), Gaps = 18/318 (5%) Query: 2 TLHRFKKIALLSALGIAAI-------SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK 54 F L+AL +AA + + E+I + + + FF++ GA++A Sbjct: 7 KSAVFTAAVTLAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAA 66 Query: 55 ELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLT 114 +G + ++ Q I+ F+ QG N I++SAV +G+ PA++RA Q G+ V+ Sbjct: 67 SIGATANTQD-AQLDLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIA 125 Query: 115 WDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 D+ K S T A G + K V +P + + Sbjct: 126 VDTPAK----SADAVVMTDAVQAGEKSCQYLFEQMGGKGNVLLVDGTP-LQTIRDRITGC 180 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K PG ++V Q ND L +L A D+ I + + A A + Sbjct: 181 NNVVKK-FPGIKVVGQQASKNDRASGLAVTTDMLTATPDVQGIFGMNDPSALGAVLAVQQ 239 Query: 235 L-KNDKVAIVGFSTPNVMRPYVE-RGT-VKEFGLWDVVQQGKISVYVADALLKKGSM-KT 290 K V + G ++ G+ + + + +V VA ++ +T Sbjct: 240 AHKAGTVKVTGVDGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDNKPPAET 299 Query: 291 GDKLDIKGVGQVEVSPNS 308 + + V + VS Sbjct: 300 TILIPSELVTRDTVSQYK 317 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 92/286 (32%), Gaps = 9/286 (3%) Query: 23 NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVN 82 A+ I F+ S ++ KE G + + Q+ + +F+ Sbjct: 54 TKGEAKTIGVSLLNSTHVFYNSIQTAMEEQAKEYGWTLDVQDAA-GDANKQLGQVQDFIT 112 Query: 83 QGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVD 142 + +AI+++ + G ++ A + G+ V T D + + + + T + GG L Sbjct: 113 KKVDAIVIAPTNSAGSKSMIELAEKAGIPVFTMDIASDGKPVT---HVATDNKKGGQLAA 169 Query: 143 MAARQ--VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + + K VA S + + + P ++V Q D K+ Sbjct: 170 EYVVNNILTEKKGNVAVITYSE-IESCVDRETGFTDYLKENAPDIKVVDVQNYSGDQQKA 228 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER-GT 259 + +L ++D + A A + I+G+ +++ G Sbjct: 229 ADVMQNMLLKNDNIDVVFCVGDPAAIGALSSITAANAAT-KIIGYDGNPEGVAEIKKGGN 287 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVS 305 D GK ++ L+ + + + + Sbjct: 288 WVADVAQDPAGIGKTTLEAIKKHLEGEKVDSEILIAPYIIDAKNAK 333 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 103/288 (35%), Gaps = 6/288 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG-PTEPSVSGQVQLINNFVNQG 84 +I + K + ++ S G G + GV + Y P+E GQ+ + N + QG Sbjct: 54 EGTQIGGVSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQG 113 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 Y ++VS + + L PA++ A RG+ V+ + P Y N G+ V Sbjct: 114 YQGLLVSPQTDNNLQPAMETAASRGIAVVNVNDAVIPSATQYVGNVQRDN---GVRVAQW 170 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 KVA P V Q I + +++V + ++ A Sbjct: 171 FIDNRPGGGKVAAIEGQPGVFAAGQRTDGFTTTITEAG-NFQVVASVPANWSREQAYDAA 229 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEF 263 IL+ + DL A + +A + ++V++ G + G + Sbjct: 230 STILQQHPDLIGFYANNDGMALGVVEAVKAANLQEQVSVFGTDGIPDAYASIRAGDLTGT 289 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 V G++++ V LL + + V+ SV+ Sbjct: 290 VDSFPVLTGEVAMEVVLRLLAGQGIPRVVATPQALITADNVADYSVED 337 >UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF6_PAESJ Length = 327 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 110/290 (37%), Gaps = 5/290 (1%) Query: 20 ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINN 79 S +IA I + + F+ S GA +A + +++ Y GP + Q++L+ Sbjct: 41 ASDKDHTRRQIALISQELDNPFWRSVEEGAMKAAGQYRMELQYMGPFRINAEEQMKLLEK 100 Query: 80 FVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGM 139 + + II+ + + +++A + G+ V+T D+D R Y+ GT G Sbjct: 101 AIASKMDGIIMQGIGSERDKALIEKANKLGIPVITVDTDEPGSKRLAYV--GTNNSFAGQ 158 Query: 140 LVDMAARQVNKD--KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 + + + + S +Q ++ ++ I + G I + Sbjct: 159 EMGHLIAEDGQKEPSGVIGVLVGSKEAANQRLRLEGFQSVI-NTYKGLSIAEVRASNISR 217 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER 257 ++ Q AE +LK + ++ ++ + A+A +K V I F + + Sbjct: 218 LQAAQQAEQMLKEHPEITYMVGFSSLDGIGMAEAVARVKPGGVTIFAFDDLEDTLAAIRK 277 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 ++ + Q G ++ + + + + + I + EVS Sbjct: 278 KQIEASIVQQPTQMGYEAISLLNQYSQGQDVTSKQYTPISVITDKEVSAP 327 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 109/298 (36%), Gaps = 7/298 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV-TYDGPTEPSVSGQVQ 75 E+I + F+ + ++A ++LG+++ ++ E GQ+ Sbjct: 79 ALGELPKSGQGEKIGVLISSTSNEFWGTMKTRYEEAAEDLGIEIRVFEADAEDDTQGQLD 138 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT--- 132 +N V G++AII+S + L P + A + + V+ E + Sbjct: 139 ALNTMVTMGFDAIILSPIDGTNLIPGIVAANEAEIPVINLGPGVDAEALADAGGHLDGKI 198 Query: 133 --PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 + G V +D KVA AK + + G E+V Sbjct: 199 TVNFEEQGSTVANDMISRMEDGGKVAILAGLEGAGQSVGRTNGAK-TVFENTEGVELVAA 257 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNV 250 Q D K+ + + IL A+ DL I A + N AA QA + + N V + G Sbjct: 258 QACDWDTEKAYEATKDILTAHPDLKGIFACNDNMALAAVQALQEMGNKDVMVYGVDYTTD 317 Query: 251 MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + +E GT+ + K + +A +++ + K L + V Q V+ Sbjct: 318 AKAAIEDGTMMGSMTYSSAIYTKAAEEMAMLIVQGKTFKDPVYLPLTLVTQDNVADFE 375 >UniRef50_A1WJR0 Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=42 Tax=Proteobacteria RepID=A1WJR0_VEREI Length = 341 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 184/348 (52%), Gaps = 23/348 (6%) Query: 1 MTLHRFKKIALLSALGIAAIS------MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK 54 M K + + + A++ AA++IA + K +G GFF + GAQ+A K Sbjct: 3 MKKKPLKTLRATALAALQAVAWGAALASPALAADKIAVVVKSLGNGFFDAVNQGAQEAAK 62 Query: 55 EL-GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 E+ +++ Y GP + + GQ+++IN ++Q AI++SA PD L P+LKRAM RG++VL Sbjct: 63 EIKNIEIIYTGPAKSTAEGQIEIINALISQKVAAIVISANDPDALAPSLKRAMGRGIKVL 122 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKE 173 ++DS + + R +++ + A +G LV +Q D ++A S+ T+QN W++E Sbjct: 123 SFDSGVRKDGRMMHLSPSSNALIGEKLV-QLTQQAIGDSGEIAVVSSTAQATNQNIWIEE 181 Query: 174 AKAKIAK-EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 + +A+ + G ++V+ +G + KS + +G+ K+Y +L AIIAP + AAA+A Sbjct: 182 IRKVLARPAYKGLKLVSVAYGDDQIDKSYRETQGLFKSYPNLKAIIAPTTIGVAAAAKAV 241 Query: 233 ENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKG-SMKT 290 ++ K V + G P+ M +V+ G VK F +W+ + G S+ A L+ + K Sbjct: 242 QDEKKVGSVYVTGLGLPSEMAGHVKNGAVKSFAIWNPIDLGYSSIQAASQLIAGKFTGKP 301 Query: 291 GDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 GDK+ + VG V + NS + E ++ N+ K+ Sbjct: 302 GDKVSLGRVGSVVLDANS------------EAAMAEPFTYDASNVEKF 337 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 106/309 (34%), Gaps = 5/309 (1%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + + L A+ A + A IA+I +T GA++AG++ GV Sbjct: 1 MITKRMLGRLTIAMATAGLMSAAMAETTIAYITNGNTNEGWTLINGGAKKAGQKAGVKFI 60 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + +S Q+ ++ + + + NAI ++ V G+ PA+ +A+ G++V+ D+ Sbjct: 61 ELAAEKGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIKVVAVDTGISG 120 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + Y+ T M+ + KD V + + + K + + Sbjct: 121 AKITSYV--ATDNIKAAMVQGDWTAEQIKDGDTVIYVTGDQGQSTGQERKKGFLDGLNAK 178 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DK 239 ++V D T + E L+A I A A Sbjct: 179 RKNVKVVEVATT-WDQTMAQNGVETALRANPTAKVIACAWDGGALGAKAALMAAGKKAGD 237 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V I GF +++G + + G++ V A A + ++ V Sbjct: 238 VKIAGFDGSPGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEGKKVEARIDTGSFLV 297 Query: 300 GQVEVSPNS 308 V + Sbjct: 298 LPSNVDQFA 306 >UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RSF4_9CLOT Length = 315 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 102/307 (33%), Gaps = 6/307 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTE 67 + LL G S A +F G ++ + G + P + Sbjct: 14 AMLLLGGCGHGDASGRQHEARLFGATYMTRNNPYFDVLNEGIEEVVEANGDILLTRDPLQ 73 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 Q + I +++G + ++ V + + PAL + GV ++ D+ K Sbjct: 74 -DQEKQNEQIQEMIDEGIQMLFLNPVDWEKVQPALDACREAGVGIINVDTVVKDRDSVIS 132 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 187 I + Q G + ++ KD+AK+ +P T + IA H +++ Sbjct: 133 IIETDNYQAGQLCALDMMKR--KDEAKIVILD-NPIQTSITNREQGFLDTIADNH-NYQV 188 Query: 188 VTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFS 246 V + + S +L+ D I+ + A A + + ++ V I G Sbjct: 189 VYREAAAGEIEVSSHVMADLLRRDISFDVILGGNDPTALGALAALQQARREEGVLIYGID 248 Query: 247 TPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 + ++ G V G+ + A L ++ + + + + Sbjct: 249 GSPDFKAILDVGYVTGTSAQSPRSIGRKAAETAYRYLDGEPVEKYISMPSTMITRDNLHE 308 Query: 307 NSVQGYD 313 + G+ Sbjct: 309 FEIDGWQ 315 >UniRef50_A7ZI69 Sugar ABC transporter, periplasmic sugar-binding protein n=46 Tax=Gammaproteobacteria RepID=A7ZI69_ECO24 Length = 327 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 84/339 (24%), Positives = 147/339 (43%), Gaps = 18/339 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAF-IPKLVGVGFFTSGGNGAQQAGKELGVD 59 M + LG A IS +QAAE++ I K+ G+ +F G G +AGK GV+ Sbjct: 1 MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVN 60 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + GP+ QV++I + + + NAI + + L P K+A G+ VLT +S Sbjct: 61 ASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPG 120 Query: 120 KPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 +P ++ I + V+ A+++ + S TV N W Sbjct: 121 QPSA-NWDIEIIDNEKFAAEYVEHMAKRMGGKGG-YVIYVGSLTVPQHNLWADLLVKYQK 178 Query: 180 KEHPGWEIVTTQ-FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-N 237 + +P VT + S +T ++K Y DL A+++ +N A +A + + Sbjct: 179 EHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAK 238 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 +KVA+ G P+ ++ G + E +D G VA LLK +K G L+++ Sbjct: 239 NKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPG--LEMQ 296 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIG 336 +G+ +V + I+ + ++ NK+NI Sbjct: 297 NLGKADVDMDK-----------RIIRFHKVLLVNKDNID 324 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 4 HRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 + +L G + + + ++ F+ + + + G D+ Sbjct: 20 FILINLKVLEGNGGENSARQIGSRKKFGATYMTTNNRFYEIINDEIRSVVESNG-DILVT 78 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 + Q+Q I F+ AI ++ V + PAL A G+ V+ D+ + Sbjct: 79 RDAALDKNKQMQQIYEFIKLKVKAIFINPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDK 138 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 G + K KA + S +K I Sbjct: 139 LVACTVISDNYDAGVQCAKYLMKS--KSKANIMLIEHSK-AKSGIDRIKGFVDTIGAS-K 194 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAI 242 ++IV K++ + ++K ++++DAI+A + + A A + KV + Sbjct: 195 QYKIVAAGDSEGQLDKTMSLVDDLIKKHTNVDAIMALNDPSALGALAALKENGLLGKVMV 254 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQV 302 G + + G + + G I+ A +LK +K + I + + Sbjct: 255 FGVDGSPEAKTMIHDGFMTATSAQFPNKIGHIAAEKAYDILKGKRLKRDVIVPISLISKE 314 Query: 303 EVSPNSVQGYD 313 + + G+ Sbjct: 315 NLLKYEISGWK 325 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 105/290 (36%), Gaps = 6/290 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQLINNFVNQ 83 A ++ + K + ++ S G G +LG++ Y +E GQ+ + N ++Q Sbjct: 54 AAGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQ 113 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 G+NA++ S + L PA++ A GV VL + P +Y N G+ V Sbjct: 114 GFNALLFSPQTDANLIPAVEAATAAGVPVLNVNDAVIPSAANYVGNVQKGN---GVNVAN 170 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 D KVA P V Q I +E+V + ++ Sbjct: 171 WFIANRPDGGKVAVIEGQPGVYAAGQRTAGFTETITAGG-KFEVVASVPANWSREEAFNA 229 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKE 262 A IL+ Y DL A + +A + ++VA+ G + V G + Sbjct: 230 ASTILQQYPDLIGFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYAAVRAGDLTG 289 Query: 263 FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 V G+I++ VA L+ + + + V + Sbjct: 290 TVDSFPVLTGEIAMEVALRLMAGQDLPRVVATPQALITKDNVETYATSDM 339 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 96/303 (31%), Gaps = 7/303 (2%) Query: 11 LLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPS 69 + ++ + AE + L F T NG KEL GV + + + Sbjct: 4 FIIGAAMSVLLGTAAHAETVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVED-AQND 62 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT--KPECRSYY 127 V+ Q I NF+ +AIIV+ V D K A + ++ + Sbjct: 63 VAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLPDGQ 122 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEHPGWE 186 + + G L ++ K + + AK + E G Sbjct: 123 AFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDECKGIS 182 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND--KVAIVG 244 +V Q T+ L + + +A+IA + A QA + D + G Sbjct: 183 VVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDMKSYVVAG 242 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 ++ G + D QGK ++ A L+K ++ + + V V Sbjct: 243 VDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIPFQLVTPENV 302 Query: 305 SPN 307 Sbjct: 303 KDY 305 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 109/293 (37%), Gaps = 14/293 (4%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK--ELGVDVTYDG-PTEPSVSGQVQLIN 78 ++A + K + FF + NGA++ K D+ +G E + Q++++ Sbjct: 30 AETAHKPKVALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVE 89 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE----CRSYYINQGTPA 134 + +AI+++ L P +K+A+ G+ V+ D+ P+ G Sbjct: 90 QMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNVPFVGPDN 149 Query: 135 QLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGY 194 + G +V + K V PT T+ Q + + G ++V+ Q G Sbjct: 150 RKGARMVGDYLAKRLKAGDAVGIVEGVPTTTNAQQRTAGFQDAMKAA--GAKVVSVQSGE 207 Query: 195 NDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRP 253 + K A +L Y +L A++ + N A A KV +VG+ N ++P Sbjct: 208 WEIDKGNAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIKP 267 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK----LDIKGVGQV 302 ++ G V +Q + A L + + + V + Sbjct: 268 MLKDGRVLATADQYAAKQAVFGIDTALKALAEHRKQADMTGVVATPVDLVTKP 320 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 9/293 (3%) Query: 1 MTLHRFK-KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD 59 M IA ++ G A+ Q + I + + GA++ E G Sbjct: 6 MGRRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFDHPVYQLMMKGAEKVADEAGCK 65 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 V + + S Q I+NF+ QG + II++ D L PA+K+ G+ ++ D Sbjct: 66 VIF-ADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVNDAGIPLVMADRRM 124 Query: 120 K--PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + + G + + K + +P Sbjct: 125 QTHGQPIKWEALVSWDMVKSGTIGGEQTVKAIGGKGNIVVVEGTPGAGSTIDRGNAFYEV 184 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYS--DLDAIIAPDANALPAAAQAAENL 235 I +++P +I+ + K + E IL+ + ++DAI QA + Sbjct: 185 I-EKYPDIKILAKIPANFNRAKGQEVTENILQRFKPGEIDAIYYMADEMTFGGLQAIKAA 243 Query: 236 KN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 + I+ + + ++ Q ++V + ++ + Sbjct: 244 GRLGEFKIISVDGQKEAMDLLRAREIDYEAIFHPDDQA-VAVRILCDIVNGRT 295 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 115/311 (36%), Gaps = 11/311 (3%) Query: 3 LHRFKKIALLSALGIAA---ISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGK-ELGV 58 + K+AL A+ +A S + + F + N +A K + V Sbjct: 1 MKAISKLALACAISLATISTGSAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAV 60 Query: 59 DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD 118 +V + VS Q+ I+NF+ Q NAI+V V G+ P +++A Q G+ V+ Sbjct: 61 EVNFSD-ANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIALGIQ 119 Query: 119 TKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 + Y G+ G L ++ AK+ + +P ++ + K + + Sbjct: 120 SAGGK---YTFVGSKNIDAGRLQGEYMKEHLPKGAKILYLEGTPGLSHTQERKKGFEDAL 176 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN- 237 + + + D + ++ E ++++ DAI+A + A +A + Sbjct: 177 GR--SDVTTLASLSANYDRAEGMKVTEDWIQSFPKFDAIVAANDQMALGALEALQGADRL 234 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 V I G ++ GT+ + D Q K + V + L K + Sbjct: 235 KGVMISGVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEVVEGLKKGEDAPAEKLVPFA 294 Query: 298 GVGQVEVSPNS 308 + + V + Sbjct: 295 SITKDNVGQYA 305 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 103/299 (34%), Gaps = 9/299 (3%) Query: 15 LGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT----YDGPTEPSV 70 + A + +A +G + ++L + Y + + Sbjct: 36 VSSEAAKPSNDGGYVVALCNYSIGNSWRAQMEQEFVAEAEKLKAEGVVSEYYITNSNDDI 95 Query: 71 SGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQ 130 + Q+ + + + + + I+++A SP L PA++ A + G++V+++D+ + + + Sbjct: 96 NKQISDMQDLITKKVDGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQVATVGI 155 Query: 131 GTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT 190 + G + D +++ K K+ + A+ K++P EI+ + Sbjct: 156 -DQTEFGRVCADWLVKKL-DGKGKIVVLNGIAGTANDTMRWNGAEEVF-KQYPDIEILGS 212 Query: 191 QFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNV 250 D + E +L AY ++D + + A A V + Sbjct: 213 ANASWDYAQGKAAMESMLSAYPEIDGVWSQGGAMTQGAIDAFIAAGRKLVPMTSEGNNGA 272 Query: 251 MRPYV--ERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPN 307 +R ++ + D G ++ L + LDI V + V Sbjct: 273 LRAWIENRDNGLSCIAPSDPTYSGAEALRTVIKSLDGEEVPKRVTLDIPVVTEDNVDKY 331 >UniRef50_A4TH97 Periplasmic binding protein n=41 Tax=Bacteria RepID=A4TH97_YERPP Length = 329 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 17/341 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 L + + + ++ + IA + K+ G+ +FT G +A K+L V+ Sbjct: 4 NLALLNVCIVSACMLFTTQTLAAEKKHEIAVVAKVTGIPWFTRMEVGVNEAAKKLNVNAY 63 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 GP P + QV++I + + + +AIIV L P LK+A ++G+ VLT +S Sbjct: 64 QVGPATPDPAQQVKVIEDLIAKNVDAIIVVPNDAKVLEPVLKKAQEKGIVVLTHESP-DQ 122 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + + +D A+ + A + S TV N W A ++ Sbjct: 123 RIGQWDVETIDSEKYAQANMDELAKAMGNKGG-YAIYVGSLTVPLHNAWADYAIKYQKEK 181 Query: 182 HPGW-EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDK 239 +P E+ + KS T ++K Y + II + A QA + D+ Sbjct: 182 YPEMFEVTPRLPVAENIDKSYSTTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKDQ 241 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 +A+VG + P PY+ RG +K+ LWD G V +A+ LL + L I G+ Sbjct: 242 IAVVGIAMPAQAAPYLMRGDIKKALLWDPKDAGFAVVEIANQLLNGQKVTE--DLTIDGL 299 Query: 300 GQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340 G+ +V NG++ + + K+N F Sbjct: 300 GKADVD-----------SKNGVIRFNKILEVTKDNAKTLGF 329 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 117/330 (35%), Gaps = 21/330 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAA------ERIAFIPKLVGVGFFTSGGNGAQQAGK 54 M +AL+ + A ++ + I I K++G +++ GA++AGK Sbjct: 1 MKKLLSMMLALVMVFSLTACGSTNKSKDSSEGEKTIYVIVKVLGNQYWSVVQAGAEKAGK 60 Query: 55 ELGVDVTYDG-PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 +LG V G E + GQV+ I + ++ +AI+V+ + L + + G ++ Sbjct: 61 DLGCKVVIVGTAAESDIEGQVRYIQDAISAKADAIVVAPLDRTALKNPISEQFKSGTPIV 120 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK-------AKVAFFYSSPTVTD 166 DS + E S + T G + K K +A S Sbjct: 121 LIDSSVEGEDYSTAL--MTDNVEAGRMAAKEMIARLKAKGVAEDKEGTIAIQAGSTGSMA 178 Query: 167 QNQWVKEAKAKIAKEHP-GWEIV--TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDAN 223 N +K + P W+++ + D +K++ + L Y++L + P+ Sbjct: 179 INDRLKGFNEYWGENAPASWKVLNDDIKINDGDISKAVAFCQDFLTTYTNLIGVFGPNNG 238 Query: 224 ALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVK-EFGLWDVVQQGKISVYVADAL 282 + K + ++GF N + + G + G V A L Sbjct: 239 STVGFVTGLTEAKRTDLTMIGFDFSNEIEQMIRGGEYDVASMVQRQYMMGYDGVKTALEL 298 Query: 283 LKKGSMKTGD-KLDIKGVGQVEVSPNSVQG 311 G ++ + V V VQG Sbjct: 299 ANGGKVENKIVDTGVLVVDNKNVDSEDVQG 328 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 93/290 (32%), Gaps = 7/290 (2%) Query: 30 IAFIPK-LVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAI 88 + F F ++ + K LGV + V+ Q I + + QG + Sbjct: 84 VGFSQSESTSNPFRSTETDSITNQAKSLGVKLIQRN-ANADVNAQNSQIEDMIAQGAKVL 142 Query: 89 IVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI-NQGTPAQLGGMLVDMAARQ 147 IV+ + DGL PAL A + + VLT D S +I G+ + Sbjct: 143 IVAPENSDGLGPALAEAKAKKIPVLTIDRTVTGTACSDFIAFIGSNFYGQAQIAADDLAT 202 Query: 148 VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGI 207 +AKVA +P + ++ ++P +V +Q G D T + Sbjct: 203 ATGSQAKVAILSGTPGNNVTTDRTNGFQDQVKAKYPNMTVVASQTGKFDQTDGQSVMAQM 262 Query: 208 LKAYSDLDAIIAPDANALPAAAQAAENLKN---DKVAIVGFSTPNVMRPYVERGTVKEFG 264 L+A + A+ A + A QA + IV V GT+ Sbjct: 263 LQANPGITAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGTIYADV 322 Query: 265 LWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 + G ++ A + + + Q G Y Sbjct: 323 ETNPR-FGPLAFSSLQAFFGTSGVASKVIIKDSHFTQANAQQALSGGQVY 371 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 106/310 (34%), Gaps = 11/310 (3%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQ 75 S RI F G + + + ++ + Y+ E S + Q+ Sbjct: 39 AGCQSATKTKTYRIGFSQCTGGDEWRKTMLHDMKRELTFHPNYTLLYED-AENSTTRQIS 97 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 I ++QG + +IVS ++ +RG+ V+ D + E + YI G Sbjct: 98 QIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIETESYNAYI--GGDNV 155 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G L + K K ++ + P+ + + + ++ K +PG ++V G Sbjct: 156 EIGRLAGVFIGNHLKGKGRIVEIWGLPSSSPAQERHRGLLEELRK-YPGIQVVKELNGQW 214 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFS---TPNVM 251 + + L D+D + A + A + K+ VG PN Sbjct: 215 ERDTVGRVVAAELNTLKDVDLVFAHNDVMALGAYAVCKQKGIEKKLDFVGIDALPGPNAG 274 Query: 252 RPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + G +K L+ G+ ++ A +L S+K L+ + V Q Sbjct: 275 MQAITDGILKASFLYPTG--GEEAIETATRILAGKSVKREQVLNSIQIDGSNVRALKAQS 332 Query: 312 YDYEADGNGI 321 A I Sbjct: 333 DKLLAQQVDI 342 >UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-binding protein n=9 Tax=Actinomycetales RepID=B5GEU2_9ACTO Length = 367 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 99/291 (34%), Gaps = 6/291 (2%) Query: 26 AAERIAFIPKL-VGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 A+ + F F + + ++ GV + + S Q+ + + + +G Sbjct: 79 ASATVGFSQSEKEANPFRIAETASLKDEARKRGVKLLAVN-AQSQFSKQISDVQDLIAKG 137 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI-NQGTPAQLGGMLVDM 143 + ++++ ++ DG P L+ A + + ++T D Y+ G+ G Sbjct: 138 ADLLVIAPLNSDGWEPVLRAASAKKIPIVTIDRKINAGPCKDYVSFIGSDFVEQGRRAAD 197 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 + K +VA + + K K ++A++ PG ++V Q G K Sbjct: 198 KMIEATGGKGEVAILLGAAGNNVTTERTKGFKDRVAEKAPGLKVVFEQTGDFAREKGQSV 257 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DKVAIVGFSTPNVMRPYVERGTVK 261 E ++++ + I A + A A ++ V IV + G + Sbjct: 258 TEQLIQSKPGIKGIYAENDEMGLGAVNALKSAGKKPGAVKIVTVDGTRNAVKQIVDGWIS 317 Query: 262 EFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 + G ++ D K ++ + + + + + Sbjct: 318 GVIESNPR-FGPLAFQTLDTFTKGEEVQQDIVIKDSAYDKTNAEADLGKAF 367 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 104/295 (35%), Gaps = 6/295 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLI 77 A + + FF + + +LGV V + + S Q+ + Sbjct: 28 MTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVLD-AQNNSSKQISDL 86 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 QG +IV+ L A +++GV V++ D + + + G G Sbjct: 87 QAAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNIAGGK-TAVPHVGADNVAG 145 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 G + + A+V + P + + VK +A P ++IVT Q + Sbjct: 146 GRAMADWVVKTYPAGARVVVITNDPGSSSSIERVKGVHDGLAAGGPAFKIVTEQTANSKR 205 Query: 198 TKSLQTAEGILKAYSDL--DAIIAPDANALPAAAQAAENLKND--KVAIVGFSTPNVMRP 253 ++L + IL + D D I+ + + A +A D KV ++GF Sbjct: 206 DQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEALA 265 Query: 254 YVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 ++ G + + Q + ++ A +K G+ L + ++ S Sbjct: 266 RIKAGEMVATVEQNPGLQIRTALRQAVDKIKSGAALKSVSLKPVLITSGNLTEAS 320 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 101/312 (32%), Gaps = 13/312 (4%) Query: 2 TLHRFKKIALLSALGIAAIS-----MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 L + + L ++ S + + + FF GAQ EL Sbjct: 1 MLRKSLVLLTAGILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANEL 60 Query: 57 GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 G+D+T + Q +++ V+ G +V+ + L PA+ + ++G+ +T D Sbjct: 61 GIDLTVLDAGD-DAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVD 116 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 + I + GG + + + +V + + + Sbjct: 117 RTITGADVAALI--DSNNTEGGAAAASVLAKAIRAQGEVIVLRGIEGSSSSAERYEGFTQ 174 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 +A+ HP IV + D + +L + D+ I A + A A Sbjct: 175 AMAE-HPRVRIVAAEAADFDRDTARDLVTDLLADHPDVAGIFAENDEMALGAVDALGERA 233 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDI 296 V +VGF V+ + + G ++ A LL + ++ + Sbjct: 234 GKDVKVVGFDGTEEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGEAAES-VHTPV 292 Query: 297 KGVGQVEVSPNS 308 V + + Sbjct: 293 MVVTRDNIEKYR 304 >UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax=Thermotoga RepID=B9KBM0_THENN Length = 327 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 107/312 (34%), Gaps = 20/312 (6%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLV-GVGFFTSGGNGAQQAGKELGVD 59 M + +L+ G + + F+ G + AG++ GV+ Sbjct: 18 MRRVLIFLMVVLAVFGFS--------KYTFYLVSHGGPADPFWAVVMKGLKDAGEKYGVE 69 Query: 60 VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW---D 116 Y GP + S+ + L+N+ + + + +IV+ +P L L++A++ G+ V+ D Sbjct: 70 TVYLGPEKYSLKEFIDLVNSAIARKPDGLIVTITNPVALDEPLRKAIKMGIPVVAINVPD 129 Query: 117 SDTKPECRSYYINQGTPAQLGG-MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + E Y + G L G ++ +A +A P K Sbjct: 130 TRPPEEAIPYLVYVGMDEYLAGVYAARRMLQEFTPKRAVIAI--HEPGHAGLEARAKGIM 187 Query: 176 AKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL 235 +++++ E + D TK+L + L + D DAI A Q E Sbjct: 188 DVLSEKNIPVEKLDITT---DPTKALSIMKSYLMKHPDTDAIFTLGPLGAHPAIQLVEEE 244 Query: 236 K-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMK-TGDK 293 KV I + ++ GTV QG + V + G + Sbjct: 245 GLKGKVKIGAIDLTTKIIEAIKDGTVLFTIDQQQYLQGYLPVVFLYLYKEYGLIPHEKVL 304 Query: 294 LDIKGVGQVEVS 305 V + V Sbjct: 305 TGPSIVDKSNVD 316 >UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STD2_9RHIZ Length = 329 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 102/312 (32%), Gaps = 10/312 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M + ++ IA +S + + A ++A I K + FF + G ++ K GV+V Sbjct: 1 MRIFNGLALSAGLLATIAPVSAHAEDAAKVAAIVKGLDNPFFQTMQKGIEEQAKASGVNV 60 Query: 61 TYDGPTE-PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT 119 + +GQ + Q ++ +V+ +S L AL Q+ ++ DS Sbjct: 61 SVQAAANMGDATGQADRLTAMAMQDFDCYLVNPISVSNLVQALVPVAQKKKPIVNIDSTI 120 Query: 120 KPECRSYY-----INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 E GT G L ++ +KVA N +K Sbjct: 121 DAEQAKAAGFAVSTYIGTDNVAAGALAGEEMLKLVPKGSKVALIAGIVGDVGSNARIKGF 180 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 K + + E+V D K+L A IL A+ DL A + +A + Sbjct: 181 KQAVEGK---LEVVVMVSADWDREKALTAATDILAAHPDLAGFFAANDIMALGVERAVQT 237 Query: 235 LKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKL 294 D V ++G + G + G + + K + Sbjct: 238 SGKD-VKVIGLDGIVDALKSIAAGELSATVAQYPYVVGAMGLEACAVAAKGKELPANVPA 296 Query: 295 DIKGVGQVEVSP 306 + + + Sbjct: 297 PVLLINKDNAEA 308 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 105/299 (35%), Gaps = 5/299 (1%) Query: 8 KIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT-YDGPT 66 +A LG+ A + ++ I K +F AQ + G + G Sbjct: 16 LMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAF 75 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 + GQV I N V QG I+++ S G+ A+K+A GV V+ D+ T PE + Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPED-AV 134 Query: 127 YINQGTPAQLGGMLVDMAARQVNKD-KAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGW 185 T + G+ + + +V +P T Sbjct: 135 DATFATDNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSP 194 Query: 186 EIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVG 244 EIV + D TK+ E +L+ ++A+ + A A QA + + D+V I Sbjct: 195 EIVGQENTNGDQTKAQTAMENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRADQVTIGS 254 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG-DKLDIKGVGQV 302 V+ G + + + ++ V + G+ +G + + + Sbjct: 255 IDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAEDGTKPSGFNDTGSELITDK 313 >UniRef50_C0BWS5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWS5_9CLOT Length = 370 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 192/370 (51%), Gaps = 30/370 (8%) Query: 1 MTLHRFKKIALLSALGIAAI----------------SMNVQAAERIAFIPKLVGVGFFTS 44 M + + + + + +I F+PK+ G FF S Sbjct: 1 MKKKLISALLCAAMIATMVVGCGKSGSDSDSKDSGDTKKSGDDLQIVFVPKVTGNSFFES 60 Query: 45 GGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALK 103 +GAQ+ K++G ++ YDG +V+ QV +INN +NQG + I VS+V GL +K Sbjct: 61 ANDGAQEFAKKVGGFEIKYDGSATAAVADQVTIINNAINQGADGIAVSSVDATGLDEVMK 120 Query: 104 RAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG---MLVDMAARQVN----KDKAKVA 156 +AM G+ V+TWDSD + R ++QG+P LG L + A + KD K Sbjct: 121 KAMDAGLAVVTWDSDVSADARQIMVSQGSPEILGEFLLQLSENALKASGLDPAKDAVKYC 180 Query: 157 FFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTT--QFGYNDATKSLQTAEGILKAYSDL 214 + YS TVTDQN W A+ I++++P WE V + DA K++ E +L A+ D+ Sbjct: 181 WHYSQATVTDQNSWHDAAEKMISEKYPNWENVAPDNYYSEQDAEKAISVGESVLTAHEDI 240 Query: 215 DAIIAPDANALPAAAQAAENLKN--DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQG 272 + +I D+ ALP AQAA+NL VAI GF+TPN M+ + G V +GLWD QG Sbjct: 241 NLVICCDSTALPGQAQAAQNLGKTTKDVAITGFATPNAMKDFCTAGVVNNWGLWDTGLQG 300 Query: 273 KISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS--VQGYDYEADGNGIVLLPERVIF 330 I+ Y+A L + GDK+DI +G+VE+ NS DG+G+V LPER F Sbjct: 301 SIANYMAYYLASGNKVTIGDKVDIPEIGEVEIVNNSEITGDDADNVDGSGVVFLPERAEF 360 Query: 331 NKENIGKYDF 340 N +N+ YDF Sbjct: 361 NADNMDDYDF 370 >UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z758_9NEIS Length = 313 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 109/312 (34%), Gaps = 15/312 (4%) Query: 5 RFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG---VDVT 61 R+ + G+AA S + + + + FF + G GA+ A K++G V VT Sbjct: 4 RYTVLTAAVLAGLAAPSFAARPLKSVGVAVGDLANPFFVAIGKGAEDAAKKIGGPGVKVT 63 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 ++ ++ QV I NF+ + I+V+A P G+ P LK+A G+ Sbjct: 64 TV-SSKYDLNTQVGQIENFIANKVDVILVNASDPMGIEPVLKKARAAGI----AVVAVDV 118 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + G Q + V P VT + V K + Sbjct: 119 GAVGADATVMSDNAMAGAESCKFMAQQLGGRGNVVIVNGPP-VTAVSARVAGCKKVL-GN 176 Query: 182 HPGWEIV-TTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240 +PG +++ Q + ++T +L A+ +DA+ A + A A + V Sbjct: 177 YPGIKLLSDNQDAHGSRDGGMETMANLLTAHKKIDAVFAINDPTGIGAELAVKQAGRSDV 236 Query: 241 A-IVGFSTPNVMRPYVERGT--VKEFGLWDVVQQGKISVYVADALLKKG-SMKTGDKLDI 296 I ++ + ++V + +L K+ L Sbjct: 237 KLIAAVDGAPDAEKALKDKKSLFAVSAAQNPYTMATMAVQIGYDILNGKRPAKSQVLLPT 296 Query: 297 KGVGQVEVSPNS 308 V + V+ + Sbjct: 297 PAVTKANVASYT 308 >UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY2_9FIRM Length = 324 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 7/302 (2%) Query: 17 IAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP-TEPSVSGQVQ 75 +A + + ++A + K F+ + GA+ A E +D+T DGP TE Q + Sbjct: 23 SSAAQVPEENRYKVALVAKSTNTDFWKAVFVGAEAAATEYNMDLTIDGPETEEDYETQNR 82 Query: 76 LINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQ 135 +I V G A++ SA+ D PA++ A +GV+++ DS E + YI GT Sbjct: 83 MIAEAVENGAQALVFSAIDFDANAPAIEEAADKGVKIVVIDSAVNTEDVATYI--GTDNY 140 Query: 136 LGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYN 195 G + AA Q + KV + + A A+ EIV T Sbjct: 141 SAGQMAAEAALQGTEGTLKVGIVNYDVNSANGQDRERGAVDTFAESG-RAEIVATIHTLA 199 Query: 196 DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPY 254 +A+ + + +L+ + +++A++A + AAQA E L + + +V F + V Sbjct: 200 EASSAQEDTRKMLQDHPEINALLAFNEPTSVGAAQAVEELHLQNALWMVAFDSNLVTIDA 259 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKG--SMKTGDKLDIKGVGQVEVSPNSVQGY 312 ++ G V + + + G V A LL ++ + + + + Q Sbjct: 260 LQTGVVDALVIQNTYEMGYFGVQSAYKLLSGQRSEVEKHVDTATRVINRENLFDLDSQKV 319 Query: 313 DY 314 + Sbjct: 320 LF 321 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 103/304 (33%), Gaps = 7/304 (2%) Query: 11 LLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPS 69 + + A + AE I + F T NG + K L GVD+ + Sbjct: 4 FIIGIAAAVLVSTAAHAETIGASMAVFDDKFGTLLRNGMEDYAKTLDGVDLQIEDALN-D 62 Query: 70 VSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDT--KPECRSYY 127 V+ Q I NF+ G +AIIV V D K A G+ ++ + + Sbjct: 63 VAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNREPVNIDTLPEKQ 122 Query: 128 INQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA-KEHPGWE 186 + G L ++ K K + K+ +A + G E Sbjct: 123 AFVASNEVDSGTLQTREICKLLDGKGKAVVIMGELSNQAARMRTKDIHDVLATDQCKGIE 182 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN--DKVAIVG 244 IV Q T+ L A + DA+IA + A QA + D V I G Sbjct: 183 IVQEQTANWQRTQGADLMTNWLSAGIEFDAVIANNDEMAIGAIQALKAAGRSMDSVVIGG 242 Query: 245 FSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEV 304 + + G + D V QGK S+ A L K +++ + + V + + Sbjct: 243 IDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGEAVERKIYIPFELVTKANL 302 Query: 305 SPNS 308 + Sbjct: 303 AEFQ 306 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 106/290 (36%), Gaps = 12/290 (4%) Query: 30 IAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAII 89 I V +F+ G +EL V++ + + Q+ I F+ +G + II Sbjct: 57 IGVASPNNKVPYFSKLVEGMTDLQEELNVELDVQD-AQDDTNTQINQIQTFIAEGCDLII 115 Query: 90 VSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC-----RSYYINQGTPAQLGGMLVDMA 144 + V + L P + + ++T D + G GG Sbjct: 116 MMPVQLESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGEL 175 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 Q+ D+ +A + + Q + + +++ PG EIV Q D ++++ Sbjct: 176 VHQLLGDEGSIALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAITVT 235 Query: 205 EGILKAY--SDLDAIIAPDANALPAAAQAAENLKNDKVA--IVGFSTPNVMRPYVERGTV 260 + L + ++DAI+A D + A A ++ D++ ++G+ P+ + ++ + Sbjct: 236 QNFLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDM 295 Query: 261 KEFGLWDVVQQGKISVYVADALLK--KGSMKTGDKLDIKGVGQVEVSPNS 308 L G +++ VA L ++ +I V Sbjct: 296 YGSTLQAPYDMGALTLQVAYQCLTEGSEEIEANTYTEIPVVYIENAREYD 345 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 107/302 (35%), Gaps = 9/302 (2%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 + + FF G +A ++ G +V + + + Q+ LI Sbjct: 51 GQPAGGADKIVCGVVLIDMTNQFFVDMIEGGNKAAEDYGCEVIWK-SADGNFDNQISLIE 109 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 NF+ QG + I+V + +GL P +++A G+ +T E + + Sbjct: 110 NFIEQGVDCILVDPLDSEGLKPVIEKASAAGIPTITMAGQVDVETNYTTVY---NDEENT 166 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 ++ ++ ++ K A Y + + K A + +++P +V Q D Sbjct: 167 RIIAEMTAKMIGEEGKTALLYGNKGNLVSDLRQKGYYAGM-EKYPNITVV-EQPTNWDPP 224 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVER 257 ++ A+ ++ A DL AI AA QA + ++ + + + VE Sbjct: 225 TGMKAAQDLIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDALKAVES 284 Query: 258 GTVKEFGLWDVVQQGKISVYVADALLKK-GSMKTGDKLDIKGV-GQVEVSPNSVQGYDYE 315 G L + G ++ VA L + LD V + + G + Sbjct: 285 GQFTSTVLTGAKKTGYWNIQVALQLASGVRPAEKILNLDTHFVMTDENKAKFAEMGIEGT 344 Query: 316 AD 317 D Sbjct: 345 ED 346 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 110/298 (36%), Gaps = 7/298 (2%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEP-SVSGQVQL 76 A + + ++ K + ++ S + AQQ LGVD+T P E + QV + Sbjct: 39 AEAGTEKKEGISVYWVGKTLNNPWWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSM 98 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 I + + +AI+VSA S DG+ PA+K+A + G++++ +D+ G Sbjct: 99 IEAAIEKKADAIVVSAASSDGVIPAIKKAREAGIKIVNFDTRISDTSVIDAFVGGDDV-A 157 Query: 137 GGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYND 196 G + + +VA + A+ +PG ++V Q Sbjct: 158 GAYKAGKYICEQLGGEGEVAIITGLMEQSTGVDRHAGFMQACAE-YPGIKVVAEQGAEWS 216 Query: 197 ATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ--AAENLKNDKVAIVGFSTPNVMRPY 254 + K+ IL A ++ AI A + A K D + +VG+ Sbjct: 217 SDKAADVTTNILTANPNVKAIFACNDQMAVGMVNAAKAAGKKADDLILVGYDGILDAVNM 276 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGS--MKTGDKLDIKGVGQVEVSPNSVQ 310 G + F + +G + V +A AL+ D V V + Q Sbjct: 277 TMDGDLDAFVSLPNLDEGAMGVKLATALVMNSDYHYDREILYDCTLVTGEFVDGLTDQ 334 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 5/304 (1%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 L + L + + + V + +A I ++ ++ + GA+ A KE ++ + Sbjct: 14 LVFLVAVTLFYSCSASLTDVVVDKKKTVALIVRMKHGDYWRTVKLGAEMAAKEYERNLNF 73 Query: 63 DGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 P E Q++L+ + G I+V+ L A+K +R + +L D+ Sbjct: 74 YAPDYEEDAQRQMELVQQAIADGSETIVVAPSDERVLREAIKLTRERAIPILVLDTVGND 133 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 YI GT G + + K ++ + + + + + +E Sbjct: 134 SAVKSYI--GTDNYDMGRKAFEKMVYLIEKKGQIVLLGTDRIKANAKRREQGVLDLLPRE 191 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKV 240 E+V + +D + + +++ + L +IA D++ A+ E+ DKV Sbjct: 192 M-QVELVANENAPSDKKQIGEWTRELIRKHPQLKGVIALDSSTAIGVAEELESSGLRDKV 250 Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVG 300 IV +P + Y++ G + + + G + V A ++ + K + Sbjct: 251 KIVAIDSPPEVLEYLQEGIISATIIQKPLSMGYLGVKYAVEASNGEAVPSLVDTGTKVID 310 Query: 301 QVEV 304 + + Sbjct: 311 RENM 314 >UniRef50_Q7CTE3 ABC transporter, substrate binding protein (Ribose) n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CTE3_AGRT5 Length = 309 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 98/307 (31%), Gaps = 5/307 (1%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGP 65 K L + + S A+ + ++ + T KELGV+V Sbjct: 1 MNKKTLFAGVAALIASAGFAEAKTVCYVTAADSHAYVTPANKAIDARAKELGVEVLSL-S 59 Query: 66 TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRS 125 V VQ IN + + II+ + P P L +A G+ V +S + Sbjct: 60 QNFDVQTGVQQINTCIARKAAGIILWPLDPQAYIPGLAKAKAAGIPVNLINSPMNDAAKP 119 Query: 126 YYI-NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184 + G G + A ++ K + V AK+ Sbjct: 120 FVTSFTGPDVYSEGEMAAEALQKALDGKGSIVIIAGQAGNGTTIGRVDGFNAKLKALGSK 179 Query: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENLKNDKVA-- 241 E++ T D K+L + ++ + D + + A D A + K+ K Sbjct: 180 IEVLDTVNADFDQQKALVASRDLITRFGDKIAGVYANDDTMARGFIDAWKEAKSGKATPP 239 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 IVG + + G + + ++ G +++ +L + + + V + Sbjct: 240 IVGINGQKDAFESIRNGEMYATIVQSPIEDGLLAINAMADVLNGKKIDARLPIPLTVVTK 299 Query: 302 VEVSPNS 308 V Sbjct: 300 ANVEKEK 306 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 100/292 (34%), Gaps = 8/292 (2%) Query: 26 AAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGY 85 + I + + + N + ++ G + + + + QV + + + Q Sbjct: 87 SDYLIGYSQLANTGTYRIAETNSMKDEAEKRGFKLIVTD-AQDNTAKQVSDVEDLIAQNI 145 Query: 86 NAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYI-NQGTPAQLGGMLVDMA 144 + +I+S +GL AL+ A + V V+ D K E Y+ T G Sbjct: 146 DLLILSPREFEGLETALQTAKENSVPVILVDRLAKGEAGVDYVTYIATDFVWEGQAAGEW 205 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 + + + + A + ++ G +I+ +Q G + ++ + Sbjct: 206 LKDKTGGTCNIIELTGTVGSSSAQDRATGF-AGVVDQNEGMKIIASQTGNFERSEGQKVM 264 Query: 205 EGILKAY-SDLDAIIAPDANALPAAAQAAENLK---NDKVAIVGFSTPNVMRPYVERGTV 260 E +L+A+ ++DA+ + A QA + N+ + ++G V G + Sbjct: 265 ENLLQAHGGEVDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDSFKSVIAGEM 324 Query: 261 KEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 + G I+ + +L + ++ V N Y Sbjct: 325 SATVVSSP-MYGPITFDTVEKILAGQEVPEQTIMEGVVVDAGNAQENMELAY 375 >UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinobacteria (class) RepID=Q1AUT8_RUBXD Length = 351 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 116/289 (40%), Gaps = 4/289 (1%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ- 83 I +GF G ++A +ELGVD GP S QV + ++Q Sbjct: 65 GDKLVIRVSYHNTSLGFANPIREGVEKAKRELGVDAELIGPANGSAQEQVSELQTLISQQ 124 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 + + VS+ S D L P + +A G+ +++++++ + ++ Q Q G + Sbjct: 125 KVDGLAVSSASNDALKPVIAQAYNAGIPIISFNTNNPGSKQMAFVGQ-DLVQSGRFEAEQ 183 Query: 144 AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQT 203 +++ K KV F N +A + + G +I N+ ++ Sbjct: 184 LRKELGDRKGKVVVFSVDTGAGWSNDRFSGFEAGM-EGAEGIQIEGPINSGNEPRQAFNA 242 Query: 204 AEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKNDKVAIVGFSTPNVMRPYVERGTVKE 262 + + A D AI + D ++ AAA+ + K ++ +VGF ++ G ++ Sbjct: 243 VQNTMTANPDAIAIASLDCCSVDAAAKWVQQNGKKGEIIVVGFDVLPQTADFIRNGVIQF 302 Query: 263 FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQG 311 + V+QG SV + + LKK K V + + ++G Sbjct: 303 TISQNPVEQGYQSVKILNDFLKKNKPLRDVNTGTKLVDKSNIDEVPLEG 351 >UniRef50_C2CUT5 ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUT5_GARVA Length = 341 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 9/318 (2%) Query: 2 TLHRFKKIALLSALGIAAI----SMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 T+ +A +SA G + + ++ + K G+ +F +G ++ GK+ Sbjct: 7 TMLTVAFLAPMSACGSGGLIGSKQSSKNGKIKMVLVAKQEGIPWFDDMRSGVERFGKDHE 66 Query: 58 VDVTYD--GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 +V P + Q Q+I++ ++Q AI+V P L P +K+A +G+ V++ Sbjct: 67 GEVEVKQIAPDSGDSAKQAQMISDLISQNVKAIVVVPNDPQALKPVIKQAKAKGIVVISH 126 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAK 175 + + Y I G A K K+A S T+ W K K Sbjct: 127 EGGNIADDVDYDIEAFKNKDFGEGFCKPLA-DGIGGKGKIAAIVGSKTMETHMAWYKACK 185 Query: 176 AKIAKEHPGWEIVTTQF--GYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 + I KE+P V+ + N+ + + + IL A+ DL + +A A + Sbjct: 186 SLIEKEYPDISFVSDEPYEDNNNDDTARKVSTEILNAHPDLKGLFGTSVSAGANMAAVLK 245 Query: 234 NLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDK 293 N V + P+V PY+ G VK W G ++ +A +K + G Sbjct: 246 ERGNKNVFVSSLGIPSVDMPYINEGWVKYAKAWRPADAGYAALSLAYNKIKGKKISNGTN 305 Query: 294 LDIKGVGQVEVSPNSVQG 311 L++KG ++V + V+G Sbjct: 306 LNVKGYEDIQVDGHQVRG 323 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 100/305 (32%), Gaps = 13/305 (4%) Query: 9 IALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTE 67 +++L+A + + + I +G + + + A ++ +V + + Sbjct: 16 VSVLAAGTVTVSAAEKKDKYVIGMSQCNLGEPWRVAMNDQIAMAAEKHPEFEVIFADAAQ 75 Query: 68 PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYY 127 S Q+ I NFV G + II S L A+ A G+ V+ D + + + Sbjct: 76 -DNSKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVILLDRKIDGDKYTQF 134 Query: 128 INQGTPAQLGGMLVDMAARQ-VNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE 186 I G G + + D KV + + I K E Sbjct: 135 I--GADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNGFREGIKKND-KIE 191 Query: 187 IVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGF 245 IV K++ AE +L+ ++D +A + A AA+N + VGF Sbjct: 192 IVAVNNADWLREKAITVAEEMLQTNDEIDLFLALNDPMAEGAYIAAKNAGREGDILFVGF 251 Query: 246 STPNV---MRPYVERGTVKEFGLWDVVQQGKISVYVADALL-KKGSMKTGDKLDIKGVGQ 301 V G + ++ G ++ A LL + + L + V Sbjct: 252 DGLPTPDGGIRSVMDGRLSMTQVYPTG--GTEAIESAYQLLVEGKELDKTLTLTSEIVTP 309 Query: 302 VEVSP 306 Sbjct: 310 DNAEE 314 >UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJR9_9BACT Length = 326 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 104/322 (32%), Gaps = 18/322 (5%) Query: 1 MTL--HRFKKIALLSALGIAAISMNVQA-------AERIAFIPKLVGVGFFTSGGNGAQQ 51 M + +A L S + + + + + FF A+ Sbjct: 1 MKKLLNALMLLACLGLFSSCGESDSASSNEPLQKNKKLLGITVMTLANPFFVELAEAAKA 60 Query: 52 AGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVR 111 ++ G +V + Q + + +F++Q +AIIV+ + + +K A + Sbjct: 61 EAEKHGYEVIIL--SGDDAEKQAKQMKDFISQKVDAIIVAPKNTLAIGEPIKAANAAEIP 118 Query: 112 VLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWV 171 V T D+ N T GG L A V + KV V Sbjct: 119 VFTADTGCTDPGAKVVCNVMTDNFGGGKLAAQAMIDVLPNGGKVLILDFKK-AQSCLLRV 177 Query: 172 KEAKAKIAKEH-----PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALP 226 K IA+ + IV G S + E L A DL + A + + Sbjct: 178 DGFKEVIAEHNEAHPDKKIVIVAELDGAAAEEPSKKATEDQLNATPDLKGVFAINDLSAL 237 Query: 227 AAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKK 285 A A + V I+GF + + + RG + + + GK++V A Sbjct: 238 GAVVALKKANKLQDVKIIGFDGLRIGKEAILRGEIHADPIQFPSEIGKLTVQQILAYKNG 297 Query: 286 GSMKTGDKLDIKGVGQVEVSPN 307 +K + K Q + + Sbjct: 298 DEVKPEILIATKLYYQEDAKND 319 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 109/314 (34%), Gaps = 6/314 (1%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M L + + + + +F + +++ + G + Sbjct: 1 MIAATIVACTTLFIAIGIHEKKDTRKQLKFGATYMTMNNPYFVNMDENIEESVQAKGDIL 60 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 P + Q + I + +N+G + + + V + + PAL+ ++ + V DS+ Sbjct: 61 ITRDPLQ-DQKKQNEQIKDMINEGIDVLFLQPVDRNKVRPALELCKKKHIPVFVIDSEVS 119 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 G ++ K A + + N+ VK + I K Sbjct: 120 DTEAVVSTIVSDNYDAGVQCAKDMMKK--KTSANIIIVN-QKALNSINERVKGFRDTI-K 175 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDK 239 HP ++IV + + +++ E I+ + D ++ + A + K D+ Sbjct: 176 GHPQYKIVEEKESAAEFEIAMKVMEKIIYEKKNYDVVMGGNDPIALGCIAAMQMTDKTDQ 235 Query: 240 VAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGV 299 V + G + ++ G ++ ++ G+ +V A + L ++K + ++ + Sbjct: 236 VMVYGVDGSPDGKAMIKAGFLEGTAAQSPIKIGEKAVQTAYSYLAGETVKKHVTIPVELI 295 Query: 300 GQVEVSPNSVQGYD 313 + + G+ Sbjct: 296 TADNLKFYDMTGWQ 309 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 104/311 (33%), Gaps = 9/311 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M I + + + E+I F + + F A +A KELGV++ Sbjct: 1 MKK---ITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNL 57 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 ++ S QV + N + +G +VS + + A+ + V+T D K Sbjct: 58 QVLD-SQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVK 116 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 + + + G GG + + + A + P + + + + + Sbjct: 117 TDKKVPHF--GANNYKGGQAIGDFVKARFPNGADIVLLTGQPGSSSNIERTQGIRDSLKA 174 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANALPAAAQAAENLKN-- 237 + +V Q G ++ ++ E +L + I++ + + A +A ++ Sbjct: 175 GGSKYRLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKP 234 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 +V + GF V G + ++ ++ S TG Sbjct: 235 GEVMVTGFDAVPEALARVRDGWLAATADQRPGYAVTQAMTQLTNNIRTKSAITGADYPPT 294 Query: 298 GVGQVEVSPNS 308 + + ++ Sbjct: 295 MITKDNLNDAE 305 >UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Tax=Proteobacteria RepID=B5XQK7_KLEP3 Length = 317 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 113/311 (36%), Gaps = 10/311 (3%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62 R +A ++ IS A A + FF GAQ A K G D+ Sbjct: 8 KLRLLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKASGKDLVI 67 Query: 63 DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122 + + Q I N++ QG I+V+A+ +G+ PA+K A + V+ D+ Sbjct: 68 FN-SNDNPVAQNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDAVLPAG 126 Query: 123 CRSYYINQGTPAQLGGMLVDM----AARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKI 178 ++ + G GG ++ ++ +A++ + QNQ K + + Sbjct: 127 PQAAQV--GVDNIEGGRIIGQYFVDYVQKEMGGQARLGIV-GALNSAIQNQRQKGFEETL 183 Query: 179 AKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN- 237 P I G N K++ AE ++ DL AI A AL A A EN Sbjct: 184 KSN-PKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAVENQGRQ 242 Query: 238 DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 + + G+ ++ G V D + G ++ +++ ++ + Sbjct: 243 KDIKVFGWDLTAKAISGMDGGYVTAVLQQDPEKMGAEALNALNSITSGKTVPKTILVPAT 302 Query: 298 GVGQVEVSPNS 308 V + V Sbjct: 303 VVTKANVDSYR 313 >UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT Length = 324 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 103/322 (31%), Gaps = 10/322 (3%) Query: 3 LHRFKKIALLSALGIAAISM-NVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVT 61 + R K L A +++ A + K + F+ + G G + +E GV Sbjct: 1 MSRLKTTLKLGAAFATLLAVTPAMADGEYGVLMKTLANPFWGAMGQGVEAGAQEAGVAYY 60 Query: 62 YDGPTEPSVSG-QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSD-- 118 + Q+ + N + + A+I +A++ L P LK A G++V+ D + Sbjct: 61 MQAVESDQAAEPQLNVCNTMLERNPVAMITAAINSTNLLPCLKSAQDAGIKVVDLDGNLD 120 Query: 119 ---TKPECRSYYINQGTPAQLGGMLVDMAARQVNK--DKAKVAFFYSSPTVTDQNQWVKE 173 E G+ L G V + Sbjct: 121 QAILDAEGIEITFRIGSDNVLAGAQGAEYVVSQLGADATGPVLVIEGLSGNITGQKRASG 180 Query: 174 AKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAE 233 K+A+ PG EIV + G D K+ IL L AI A + A ++ Sbjct: 181 FADKLAELAPGLEIVASLPGDWDRGKAANITNDILTRNPGLVAIFAANDGMALGAVESVF 240 Query: 234 NLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 +V IVG + + G + GK +V ++ G + Sbjct: 241 AAGKGGEVIIVGVDGNSDAVKSINEGRLTASVAQLPYLVGKQAVENVKIAVEGGEVAKEI 300 Query: 293 KLDIKGVGQVEVSPNSVQGYDY 314 + + + + + ++ Sbjct: 301 IVPTLVLTKDVMDAGTEPLLEF 322 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 98/289 (33%), Gaps = 7/289 (2%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQ-AGKELGVDVTYDGPTEPSVSGQVQLINNF 80 I F F G Q ++ V+V Y E GQ+ + + Sbjct: 40 AGDDGKMVIGFAHPDFNDMFLGFLLAGVQAYEAEQTNVEVVYVD-AENDSDGQIAQVEDL 98 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + QG +AI+ V + RA Q GV V+ + D G+ + G + Sbjct: 99 IAQGVDAIMAIPVDLIATEFIVDRAQQAGVPVVLINRD---SVEREDAYVGSDSLQAGTI 155 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 V K K K+A T Q K + ++PG E+V G K Sbjct: 156 QMEEVAAVLKGKGKIAIMNGQMGHTAQINRTLGNKQVV-DQYPGMEVVIEGTGGWSREKG 214 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGT 259 + E +++ DA++A + A AAE D++ G Y+ +G Sbjct: 215 KELMESWIESGQTFDAVVANNDEMAIGAIMAAEEAGIVDELVFAGIDGTPDALDYMSKGK 274 Query: 260 VKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNS 308 + D QG+ + A L K S + + + + + V Sbjct: 275 LTISVFQDAKGQGQTGLEQAIKLAKGESAEKMTNIPYETITKRNVDEYK 323 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 120/320 (37%), Gaps = 19/320 (5%) Query: 7 KKIALLSALGIAAISMNVQAA----------ERIAFIPKLVGVGFFTSGGNGAQQAGKEL 56 +L +G A S Q+A ++I I K F+ + GA+Q+G + Sbjct: 18 LVALVLGVVGGRATSSASQSAGGGMAGAASGKKIDVIIKASDSSFWQTMIAGAKQSGGDF 77 Query: 57 GVDVTYDGP-TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTW 115 G+ V+ GP +E ++ QVQL+ N +++G + ++++ S L A++RA + G++V+T Sbjct: 78 GLKVSTFGPTSETNIDQQVQLVENSISRGVDGLVIAPNSSSALNSAIERARKAGLKVITV 137 Query: 116 DSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKD----KAKVAFFYSSPTVTDQNQWV 171 DS GT GM ++ K V S + Sbjct: 138 DSRVTTASEG---FIGTDNLKAGMQAGKRMCELLKAQNKTSGSVMIESSVAGIQSLVDRD 194 Query: 172 KEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQA 231 K +A P ++ ++ ND + L A +L + A + + AA+A Sbjct: 195 SGFKQGLANNCPQVKVTLQRYNNNDINTAASQVNDALTANRELAGVFADNNTSGVGAARA 254 Query: 232 AENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKT 290 ++ D V +V F + + GT+ + + G V A Sbjct: 255 IQDNNVTDTVPVVAFDSDPQENAALAAGTIDALVVQNPYFFGYQGVLAAGMAAAGRIPPR 314 Query: 291 GDKLDIKGVGQVEVSPNSVQ 310 + ++ V+ Sbjct: 315 DIDPGAVVADKRNMNDPDVK 334 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 110/327 (33%), Gaps = 22/327 (6%) Query: 1 MTLHRFKKIA-------LLSALGIAAI--------SMNVQAAERIAFIPKLVGVGFFTSG 45 M ++ IA LL+A G S + I + F T Sbjct: 1 MKKNKTILIAFSILMSLLLAACGSGGETSGDGNGESTGDSGQKVIGVSISNL-DEFLTYM 59 Query: 46 GNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKR 104 + ++ + + + + Q+ + NF+++ +AIIV+ V + Sbjct: 60 QDAMKEEAANYPDFEFIFSD-AQNDSTQQMAQVENFISRNVDAIIVNPVDTTSAVDIVNM 118 Query: 105 AMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTV 164 G+ ++ + G+ + G+L ++ ++ +A Sbjct: 119 VNDAGIPIIIANRTFDGVD-QATAFVGSESIQSGLLQMEEVAKLLNNEGNIAIMDGELGH 177 Query: 165 TDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANA 224 Q + K I +EH G E+V D ++ ++ E L + +++DA++A + Sbjct: 178 EAQIMRTEGNKQ-IIEEHDGLEVVLQGTAKFDRSEGMRLMENWLNSGTEIDAVVANNDEM 236 Query: 225 LPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 A A E + D V + G ++ G + D QG SV VA Sbjct: 237 ALGAILALEAVGKLDDVIVAGIDATPAALEAMKEGKLDVTVFQDAKGQGATSVKVAVQAA 296 Query: 284 KKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 ++ + + V V + Sbjct: 297 NGEDVEDAM-IPYELVTPENVEEYEAK 322 >UniRef50_B0PC03 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PC03_9FIRM Length = 385 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 13/321 (4%) Query: 24 VQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQ 83 + A + K + F G ++ + +G + Y G EP+ ++++I + Q Sbjct: 70 SEDAPTYVMVSKTLSDPVFIDMYIGFREFCESIGANCMYRGSDEPTAEKEIEIITQLMAQ 129 Query: 84 GYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDM 143 G + + V A D L P L +AM +G+ V+T+DS P+ R ++ Q + +G + Sbjct: 130 GVDGLAVIAADFDALEPVLTQAMGQGIAVVTFDSAANPDSRQLHVEQASIDLVGRDQMKS 189 Query: 144 AARQVNKDK--AKVAFFYSSPTVTDQNQWVKEAKAKIA---KEHPGWEIVTTQFGYNDAT 198 A + V + P W ++ ++ ++ +G + Sbjct: 190 ALEIIGGPGAEGTVGILSAQPESQLHADWCNAMLKEVEDNPEDFANVTVLPIAYGDDLPD 249 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 KS A+ +L+ Y D+D II+P + +AA+ +++ + + + G P+ M PY+E G Sbjct: 250 KSTTEAQAMLQNYPDIDVIISPTTVGILSAAKVIQDMGS-ECKVTGVGLPSEMAPYIESG 308 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADG 318 + LW+ QG ++ +++ S V + +V+ Y DG Sbjct: 309 ICYDCYLWNPYDQGYLAAASVNSISTGESTGAVGDT----VTAGRLGEYTVEEY---YDG 361 Query: 319 NGIVLLPERVIFNKENIGKYD 339 VLL + + F KENIG+Y Sbjct: 362 GTQVLLGDPIRFTKENIGEYK 382 >UniRef50_Q0AZU3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZU3_SYNWW Length = 352 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 167/362 (46%), Gaps = 35/362 (9%) Query: 1 MTLHRFKKIALLS-ALGIAAISMNVQA-------------------AERIAFIPKLVGVG 40 M RF LL A+ ++ + + +IAF+ GV Sbjct: 4 MKKSRFFIAVLLIWAMSLSVFGCSKEDSATTGDAKKAETGEKAPATKGKIAFVTFATGVP 63 Query: 41 FFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG-YNAIIVSAVSPDGLC 99 +F G GA+QAG+ LG +V Y GP + + ++Q+IN+ V QG AI+V+ + + Sbjct: 64 YFEIGAAGAKQAGQALGYEVVYKGPAKADSAAEIQIINDLVTQGEVKAIVVACMDSKSII 123 Query: 100 PALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFY 159 PALK+A + ++V+TWD D +PE R Y +G ++ R V D+ + A Sbjct: 124 PALKKAREADIKVVTWDLDCEPEGRDCYAGLMDLVVMGNEWIESMVRSV-GDEGEYAIVM 182 Query: 160 SSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIA 219 ++ T N+ + K A+++P ++V + D K+ Q ++ +L Y +L I Sbjct: 183 ATLTNEFMNKRIDNMKKYAAEKYPKLKLVAVESCDADPQKAYQISKDLLTKYPNLKCIAT 242 Query: 220 PDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYV 278 A +AA+A E+ +V +VG TPN+ +P + G KE LWD + V + Sbjct: 243 SSTEAFSSAAKAIEDDGKIGQVYVVGGLTPNLAKPAFKSGAAKEAVLWDPGKWAGFGVTI 302 Query: 279 ADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 A L++ + K++I G + E+ GI+ E + F EN+ +Y Sbjct: 303 ATQLIEGKTFDKVGKVEITGFPKAEL------------FAPGILYYHELLTFTPENVDRY 350 Query: 339 DF 340 DF Sbjct: 351 DF 352 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 12/320 (3%) Query: 3 LHRFKKIALLSALGIAAISMNV---QAAERI-AFIPKLVGVGFFTSGGNGAQQAGKELGV 58 + + + A+ I+A S++ + ++I F + + N ++ + Sbjct: 1 MPKLLVFSAYVAIAISAFSLSGCIREKTKKIVGFSQTENIGPWRIAETNSIKEEAAKHKK 60 Query: 59 DVTYD-GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 + + S Q I + + + + I ++ +GL PAL+ A + + D Sbjct: 61 TYDFLITDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDR 120 Query: 118 DTKPECRSYYI-NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 + +++ G+ G V + KA + + + K + Sbjct: 121 EAAGRPGEHFVSFLGSDFIAQGRRVGEWLAKATDGKASIVELTGTAGSSVAIDRAKGFRN 180 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKA-YSDLDAIIAPDANALPAAAQAAENL 235 IA +P +I+ TQ +++ E I++A SD+ A+ A + A QA ++ Sbjct: 181 AIA-TYPNMKIIATQTADFSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGAIQALKSA 239 Query: 236 KN---DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 V + + RG + + G + + + Sbjct: 240 GMKPGKDVMVGSIDGQKAALEAIIRGELGVSVESNPR-FGPLVFATMEEYFAGKKIPPRI 298 Query: 293 KLDIKGVGQVEVSPNSVQGY 312 L + + Y Sbjct: 299 ILKDRLFDVTNAKDFVNEAY 318 >UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=Pseudonocardineae RepID=A4FMX8_SACEN Length = 323 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 119/324 (36%), Gaps = 11/324 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAER-------IAFIPKLVGVGFFTSGGNGAQQAG 53 M H ++L G + + + +A + + G F+ S A+Q Sbjct: 1 MRRHILAVASVLLLAGCGSGQIGDTGGGQTDPNNRNLALLTGMRGEPFYVSMECAAKQQA 60 Query: 54 KELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVL 113 G ++ P + + Q Q++ + A+I++ L L++A GV+V+ Sbjct: 61 AAAGYNINAQAPEKFEQAEQSQMLTGIIGTRPGAVIIAPTDDKALAAPLQQAKNNGVQVV 120 Query: 114 TWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDK-AKVAFFYSSPTVTDQNQWVK 172 D+ + + + GG L Q+ K V + + ++ K Sbjct: 121 EVDTALEDRSI-AVASLSSDNYAGGKLAAQTLAQLTGGKPGAVLALNTKAGTSTTDERAK 179 Query: 173 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA 232 + +IAK HP ++ TQ+ N+ + Q L A DL + A + N A A Sbjct: 180 GFEEEIAK-HPNLRLLPTQYTENEPATAAQIVSATLAANPDLVGVFATNLNTGEGAGTAL 238 Query: 233 ENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG 291 N +V +VGF + G V+ D G+ V A A +K ++ Sbjct: 239 ANAGRSGQVQLVGFDASPKQVEDLRNGRVQALIAQDPAAIGREGVDRAIAAIKGQPVERE 298 Query: 292 DKLDIKGVGQVEVSPNSVQGYDYE 315 + ++ + + + S Y E Sbjct: 299 TRTNMIAITKDNMQAQSQYFYKSE 322 >UniRef50_A5FYX5 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FYX5_ACICJ Length = 345 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 8/289 (2%) Query: 22 MNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVTYDGPTEPSVSGQVQLINNF 80 IA +PK + F + GA Q KELG VD+ + S + +++ N Sbjct: 32 ARANKRYTIAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSDASQEAEIVQNL 91 Query: 81 VNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGML 140 + + + + + A +P L + A+++G+ +TWDSD R Y G G+ Sbjct: 92 ITRHVDGMAIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVY--YGVDNTKMGVS 149 Query: 141 VDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKS 200 + A + K KV P T+ N + K + K H G E + F +D TK+ Sbjct: 150 MGEQALKFMGTKGKVILISGGPGATNLNARLAGVKQVMGK-HKGIEFLGPYFDNDDLTKA 208 Query: 201 LQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN--LKNDKVAIVGFSTPNVMRPYVERG 258 + + +L A+ D AI+ A A A KV I+G P VE+G Sbjct: 209 QELIDNVLTAHPDAGAIVDVAAVAFFGKLSAMPKLIANRGKVKIIGSDVLAPEIPLVEKG 268 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGS--MKTGDKLDIKGVGQVEVS 305 V+ D G +V + +L T + V + + Sbjct: 269 YVQALVGQDYWGWGYQTVTIIHNMLTNKKCHYPTLVPQAMPVVTKANAA 317 >UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW07_CLOB8 Length = 326 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 5/291 (1%) Query: 27 AERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYN 86 +I I + ++ GA++A KE G V + GPT S ++L + + + Sbjct: 38 KPKIVLISHIKTNPYWLDIKAGAERAAKERGAVVEFLGPTTASTEDGLKLFDMATSAKVS 97 Query: 87 AIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAAR 146 II + AM++G+ V+T DSD + R Y+ GT L G + Sbjct: 98 GIITYVQEEGQYKKKINSAMEKGIPVVTIDSDEEDSNRIAYV--GTDNVLAGQVAGKEMV 155 Query: 147 QVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEG 206 + VA V +Q + V+ I +IV T ++ Sbjct: 156 KQIGTSGNVAIVMGGKNVKNQKERVEGFTQYIKSN-SNLKIVDTDSSDAMLLEAEIITRK 214 Query: 207 ILKAYSDLDAIIAPDANALPAAAQAAENLK-NDKVAIVGFSTPNVMRPYVERGTVKEFGL 265 IL +++A+ A AA+A ++L D+V I+ F + + G V + Sbjct: 215 ILNRNDNINALFCTSALDGIGAARAVKDLNYKDRVKIICFDDLDDTLSNIRNGLVSATIV 274 Query: 266 WDVVQQGKISVYVADALLKKGSMK-TGDKLDIKGVGQVEVSPNSVQGYDYE 315 + G +V + ++ S K + +D+ + + +V E Sbjct: 275 QKSNEMGYRAVNIIMDKIEGKSNKFSKSLIDVNVINKSDVDSYKRGDDKVE 325 >UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R356_ARTAT Length = 314 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 104/301 (34%), Gaps = 7/301 (2%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 A + + I F+ + +G ++A + G ++ + S QV + Sbjct: 19 AANAGGTGKKTIGVSMPEFHSLFYVAAVDGMKKAAADEGYELVVLN-ANGNSSQQVNQVQ 77 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 N V Q A+I + + A + V+ D + + G+ + Sbjct: 78 NLVTQQVGAVIFAMQDATAGAAGVAEAKGANIPVIAIDQRPQGD---VTTFIGSDSVKAS 134 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + + K +A + + + K + I +++P ++V+T D Sbjct: 135 TELCDYLAKQMGGKGNLAIIKGVLGSSTEIERSKGCGS-ILEKNPDIKVVSTTNADWDEN 193 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 K+ A+ +L A +L AI A + AA+AA + IV + +E G Sbjct: 194 KAYNVAQDVLTANPELQAIFAQNDGMALGAAKAAAQAGRSNLKIVSVDGFPQVYDAIESG 253 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKG--SMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 V + Q G+++V A + S++ V + + GY A Sbjct: 254 QVLATMSQEPYQMGELAVRTAIKAMSGEAGSIQKEQLQPTVLVTKENLEEARSAGYYGPA 313 Query: 317 D 317 Sbjct: 314 K 314 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 110/341 (32%), Gaps = 19/341 (5%) Query: 3 LHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVT 61 + + +L +GI I + + + + GV+V Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVS-QCSDDEWRHKMNHEIVREALFYDGVEVE 59 Query: 62 YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121 + S + Q++ IN F+++ + +IV+ + P +++A G+ V+ D Sbjct: 60 IRTAKDNSRN-QIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILS 118 Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 + + ++ G G V K K+ T + + + E Sbjct: 119 DRYTAFV--GADNCEIGKDVGQYIVNRLGGKGKILEITGLEGSTPAMERHRGLADALKAE 176 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA-AQAAENLKNDKV 240 PG EI + G + + + + IL+ ++ + A + A A + ++ Sbjct: 177 -PGIEITASVDGAWLQSVAGEKMDSILQDNKGINLVFAQNDRMAVGAYLSARQRQLEKEM 235 Query: 241 AIVGFSTPNV---MRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 VG V G + ++ G + VA +L+K + KL Sbjct: 236 LFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILEKRPYERDTKLSTA 293 Query: 298 GVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKY 338 V + +Q I L + + +Y Sbjct: 294 LVDKTNARVMQLQTDHIAEQDGKIERLNNQ-------VDEY 327 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 96/287 (33%), Gaps = 5/287 (1%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 I + FF + GK GV + + + S QV I + + + Sbjct: 26 AKELTIGLAVANLQADFFNQIKQSVEAEGKARGVKIITVD-AQGNSSTQVSQIEDLITRQ 84 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 +A+I +K A G+ V+ D + +I + + G + Sbjct: 85 IDALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDTFI--ASDSVAGAKALAEY 142 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 +V K ++A T +N K + + K PG ++V Q K A Sbjct: 143 VGKVTDGKGRIAILQGQLGTTPENDRAKGFQEGL-KGFPGLKVVAEQPAEWAQDKGFAVA 201 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVM-RPYVERGTVKEF 263 + +L+ ++ AAQA + + +V +V V G ++ Sbjct: 202 QDLLQRDPNITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLKAVASGVLQAT 261 Query: 264 GLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQ 310 + G+++V A L ++ L+ + V+P Q Sbjct: 262 MTQQTQKMGRMAVASALDLKAGKAVPKEQLLETVLTTKDNVAPFLQQ 308 >UniRef50_A6C6N8 ABC transporter sugar-binding protein n=3 Tax=Bacteria RepID=A6C6N8_9PLAN Length = 375 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 113/324 (34%), Gaps = 25/324 (7%) Query: 4 HRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYD 63 I +S + +A++ + F+ GA+QAG++LGV+V Sbjct: 12 SLLAIIFSISLIPAGCNKQGASQKNDVAYVTNGIAS-FWVIAEKGAEQAGEDLGVNVEVR 70 Query: 64 GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPEC 123 P + V+ Q +++ + QG + I +S + P LK + ++T DSD Sbjct: 71 MPPQG-VTDQKRMVQELLAQGIDGIAISPIDPANQNDLLKEIADNSI-LITQDSDAPDSP 128 Query: 124 RSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK--- 180 R YI G G + ++ + ++ F + + ++ Sbjct: 129 RECYI--GMDNYEAGRMCGELVKEALPEGGEIMLFVGRLGQANARLRRQGVIDEVMDRSN 186 Query: 181 ------------EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAA 228 ++ + I+ T+ D + A+ + Y +L ++ A P Sbjct: 187 DNTRYDEPGKVIKNEKYTILDTRTDDFDFPQGKANAQDAIAKYPNLKCMVGLFAYNPPLC 246 Query: 229 AQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGS 287 +A + D++ IV F + GTV + + Q G SV V +AL Sbjct: 247 LEAVRDAGKLDEIKIVSFDEEAASLQGIIDGTVVGTVVQNPYQYGYESVRVLNALANGDK 306 Query: 288 ----MKTGDKLDIKGVGQVEVSPN 307 + + + + + Sbjct: 307 SVIPENKIIHIPARKITKENIKEF 330 >UniRef50_B5CR03 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CR03_9FIRM Length = 332 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 98/291 (33%), Gaps = 7/291 (2%) Query: 25 QAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQG 84 Q + F + F+ + + Q A +E G + P Q I + + Sbjct: 47 QEKKVFGFCGIDMSNPFYATLKDSVQSALEEQGDKLLIKDPA-GDAERQNTQIQELIEED 105 Query: 85 YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMA 144 +A+ + V + PAL + + V+ D+ + G+ + G + Sbjct: 106 VDAVFLCPVDWKKIEPALDALEEADIPVINLDTKVYESGKVA-AFVGSDNRNAGYVCGED 164 Query: 145 ARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTA 204 + D +V + V + + + ++K +E+V ND + Q Sbjct: 165 LVERKPDGGQVVIVE-NLNVNSVCERITGFEEAVSKGA--FEVVKRIQTGNDVSGLKQQV 221 Query: 205 EGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVER--GTVKE 262 +L DLDAI+ D +A +KV + + + G + Sbjct: 222 AQVLAQNPDLDAIMCGDDQMAEQVREAITEAGQEKVYVYSVDGSPASKKALVEHTGGMMG 281 Query: 263 FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYD 313 G + GK +V +A+A+L + + + + V G+ Sbjct: 282 IGAQSPINLGKKAVKIANAVLNGEDYEKETYEETFFINRDNVEMYGTDGWQ 332 >UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport protein n=12 Tax=Proteobacteria RepID=A1SYD2_PSYIN Length = 312 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 5/306 (1%) Query: 7 KKIALLSALGIAAISMNVQAAERIAFIPKLVG-VGFFTSGGNGAQQAGKEL-GVDVTYDG 64 K A I + + I VG + T+ + + V+ Sbjct: 4 KLAITGLAFSICFSTFSFAKDYVIGVTQNNVGVDSYQTTYDIALKDTMTKYPNVEGIVLD 63 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 +V+ Q+ + + + Q +AII+ + L P +++A Q G+ V+ +S+ + + Sbjct: 64 -AGGNVARQIAQVQDLIQQEVDAIILWPTNGQALTPIVRKAKQMGIPVIITNSNISEKGQ 122 Query: 125 SYYI-NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHP 183 + G G + K +V P K + +A + P Sbjct: 123 EFITAFSGPNTITQGQYAAELMCEGLNGKGQVVQITGQPGYQTAINRQKGFEDSLAADCP 182 Query: 184 GWEIVTTQFGYNDATKSLQTAEGILKAYS-DLDAIIAPDANALPAAAQAAENLKNDKVAI 242 G I+ +Q G + KS + E + + +D + A D N A A + + I Sbjct: 183 GVSIIDSQPGDWNREKSQRVMENFITRFGTKIDGVYAADDNMGIGALNAIKEADLKNIKI 242 Query: 243 VGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQV 302 VG + V ++ G+ + V ++ + +L ++ + D V Sbjct: 243 VGATNFAVGYDAIKEGSYYGSVVQSPVSDAIAALAITMKILNGDKVEKDNYFDTPKVTLA 302 Query: 303 EVSPNS 308 + Sbjct: 303 NIDEFE 308 >UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Synergistaceae RepID=C1TNC1_9BACT Length = 338 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 102/311 (32%), Gaps = 11/311 (3%) Query: 6 FKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG- 64 ++ + ++ ERI + + ++ + + KE+G+ V Sbjct: 28 MVSKSIATIEDQMGSLPDITGQERIGVLVITLSNPYWVTMKERYGEWAKEMGISVEVMAA 87 Query: 65 PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124 PTE + Q+ + V + Y+ IIV+ + P L P + +A ++G+ V+ + + Sbjct: 88 PTEKDLKSQLNTLEAMVAKKYDGIIVTPMDPFNLIPGIVKADEKGIPVVCSGPEVSRDGL 147 Query: 125 SYYINQGTPAQLG-----GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIA 179 G L + ++VA P + A Sbjct: 148 KQAGAVMDGWITATFKDQGRLCAEDMAEKLPSGSEVAIIEGIPGAGQSKARREGASEGFE 207 Query: 180 KEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK 239 K G ++V + G D ++ ++KA+ L I + AA A E + Sbjct: 208 KA--GLKLVAVEAGNWDRNRAYDITTNLVKAHPQLKGIYCANDVMALAAVDALEVAGIEG 265 Query: 240 VAIVGFSTPNVMRPYVERGTVKE--FGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIK 297 V + G ++ G + +G + VY + K + + I Sbjct: 266 VTVYGTDFIPEAAEAIKSGRLAGSTTFSQAAWTRGTL-VYTLKLIKKDEDLPEKLSVPIT 324 Query: 298 GVGQVEVSPNS 308 V + Sbjct: 325 LVNGENIGQFQ 335 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 115/316 (36%), Gaps = 14/316 (4%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAA----ERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 + + + ++G+ + AA +I FF A+ GK +G Sbjct: 11 NVSVIAAVCVFGSIGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVG 70 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 +V V Q I+ F+ G I++ A DG+ PA+KRA+ G+ V+ D+ Sbjct: 71 AEVLSQV-ANEDVQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDN 129 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 +K +N T + G + + K K+A +P V+ + V K Sbjct: 130 QSKN----ATVNITTDNKQAGEISCRSLADKLGGKGKIAILNGTP-VSAVDDRVTGCK-G 183 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 I ++P +IV Q G N +L A IL A DLD A + + AAE Sbjct: 184 ILGQYPDIKIVADQRGENSRDSALPIATDILTANPDLDGFFAINDPSAVGVQLAAEQKGA 243 Query: 238 DKVAIVGFSTPNVMRPYVER-GTVKEFGLWDVVQQGKISVYVADALLKKGSM-KTGDKLD 295 V I + + G + D + ++ + +++ + + Sbjct: 244 S-VVITSVDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVILVP 302 Query: 296 IKGVGQVEVSPNSVQG 311 + V V+ G Sbjct: 303 TELVDASNVAKYKPWG 318 >UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XZZ5_KLEP3 Length = 311 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 110/298 (36%), Gaps = 3/298 (1%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 + + + I + + ++ S GA + + LG T E V Q +LI+ Sbjct: 17 SFAAHAAEKGTIMIMVNSLDNPYYASEAKGASEKAQALGYKTTVLSHGE-DVKKQNELID 75 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 + + II+ A+++A + G+ V+ + + + + Q G Sbjct: 76 TAIGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVDDVALEQITHNNFQAGS 135 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 + ++ ++ +K K A + + K I ++P V Q Sbjct: 136 EVANVFVEKMA-EKGKYAELTCNLADNNCVTRSKSFHQVI-DQYPDMVSVAKQDAKGTLI 193 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERG 258 + + IL+A+ D+ +I + A A + V +VG N R V+ G Sbjct: 194 DGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRSDVIVVGIDGSNDERDAVKAG 253 Query: 259 TVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 T++ + V D L+KG ++ +G+ + + + VQ ++ ++ Sbjct: 254 TLQATVMLQAQAIAAQGVTDLDNYLQKGEKPAKQRVMFRGILITQDNADKVQDFNIKS 311 >UniRef50_B8CZL4 ABC-type sugar transport system, periplasmic component n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZL4_HALOH Length = 318 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 64/310 (20%), Positives = 115/310 (37%), Gaps = 15/310 (4%) Query: 7 KKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT 66 + LS + IAF+PK + F AQ+ + LGV + + P Sbjct: 1 MVVCPLSLSLSVSAGKLPPKPLTIAFVPKSLDNPIFLDTLEAAQKEARRLGVRLEWVAPF 60 Query: 67 EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 S GQ++++ N + + + II+SA + L + +A++ G+ V T+DSD R + Sbjct: 61 TTSTEGQIKVVKNLIQRRVDGIIISANDSNALKEIINKAVKSGIAVATFDSDVPGSDRLF 120 Query: 127 YINQGTPAQLGGMLVDMAARQVNKDKA------KVAFFYSSPTVTDQNQWVKEAKAKIAK 180 Y+ GT G + A QV K K KV + + VK + + Sbjct: 121 YV--GTDNWRAGYELGKALLQVLKRKGIKTEKYKVMVLSGGKEALNLKKRVKGFAKAVEE 178 Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA----ENLK 236 E EI + +D + + E +K++ D+D I+ A + + Sbjct: 179 E-IDIEIKDILYCNDDFQLANELVENYIKSHPDIDIILFVGGWPFYVPPDAMPRFQKWAR 237 Query: 237 NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLK-KGSMKTGDKLD 295 +AI G + G ++ D G++S+ L+ K Sbjct: 238 QGGIAI-GIDIFYSALVLQKEGMIQYLVGQDFSGMGQLSLRYLVRFLRSGQKPPVIIKTG 296 Query: 296 IKGVGQVEVS 305 I+ + Sbjct: 297 IEHANTSNID 306 >UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5Z3_LARHH Length = 332 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 104/303 (34%), Gaps = 15/303 (4%) Query: 14 ALGIAAISMNVQAA-----ERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-E 67 A+ A+ + RIA + K + +F GA+QA E ++ E Sbjct: 30 AVTTASAASPESGKATGNLPRIALVMKSLSNPYFIEMEKGARQAQTENRAELFVKAVGLE 89 Query: 68 PSVSGQVQLINNFVNQG-YNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSY 126 S+ Q+Q I++ +N +AII+ L P + RA + G+ ++ D+ + + Sbjct: 90 TSIDQQIQFIDDIINNKLADAIIIVPADSSRLAPVIARAHKAGIHIINLDTRLDADALAQ 149 Query: 127 -----YINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181 G K++VA + + + + A+ + Sbjct: 150 EGIGPLPFIGVDNHRAAYKAAAHLAASLPPKSEVAIIEGNSNAINALRRSEGARQALEAA 209 Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVA 241 G +V +Q ++ + +LK +L I + + +V Sbjct: 210 --GMRLVPSQSS-WTIEQAYEITGNLLKQNPELRGIYCISDLIALGVIRYLADHGIRQVK 266 Query: 242 IVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQ 301 + GF R + + +QG +SV A + + K++ + + + Sbjct: 267 VAGFDGIAQARAALASNQMVATVDQRPAEQGYLSVKAALDAIAGKPVTGQIKVETELLTR 326 Query: 302 VEV 304 V Sbjct: 327 TSV 329 >UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK42_CLOPH Length = 320 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 124/320 (38%), Gaps = 11/320 (3%) Query: 3 LHRFKKIALLSALGIA-----AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 ++ FKKI + LG+ + S +A I K F+ S GA A E Sbjct: 1 MNTFKKIVVWILLGVMLITLVSCSNKDNKKHYVAMITKSTKSAFWQSVFAGASAAATEYN 60 Query: 58 VDVTYDGPT-EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWD 116 + ++Y GP E Q LI + G A+I SAV + A++ A ++G++V+ D Sbjct: 61 LSISYAGPELEEDYEYQNDLIYQAIEDGAEAVIFSAVDYNANAKAIEDAAKKGLKVIIID 120 Query: 117 SDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKA 176 SD + I GT G + AA +++K + + Q + Sbjct: 121 SDVNSNQVTCRI--GTDNYAAGCMAGEAALASSEEKIHIGIVNYDINSANGQQREDGFRE 178 Query: 177 KIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK 236 ++K+ +IV T + + + + +L+ + +++ I + A +L Sbjct: 179 IVSKDSRVIDIV-TINVVSTTEDARKGTKQLLEEHPEINVIATFNEWTSLGVGWAIRDLN 237 Query: 237 -NDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTG-DKL 294 D+ +V F + V +E G V + + G + V L++ S++ G Sbjct: 238 LADETTVVAFDSNVVSVGMLETGEVDALIVQNPYAMGYLGVEKVAELIRGQSIEKGTIDT 297 Query: 295 DIKGVGQVEVSPNSVQGYDY 314 + + + Q + Sbjct: 298 STTLITRDNMYDAEYQKILF 317 >UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSM5_DYAFD Length = 904 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 103/307 (33%), Gaps = 9/307 (2%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLIN 78 + + A I F + + +G Q+ + + QV+ I Sbjct: 16 GCAGKQEDAYVIGFSQCTGDDEWRRAMLDGMQRELAFHNNTKLIFRDAHANSAVQVKQIE 75 Query: 79 NFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGG 138 + G + +IVS D L P +++A ++GV V+ D T + Y+ G G Sbjct: 76 ELLRNGIHLLIVSPNESDPLTPVIEKAYKQGVPVVVVDRRTSSPYYTAYV--GGDNYQVG 133 Query: 139 MLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDAT 198 V A + K+ P + + + +A P V T G Sbjct: 134 KTVGEYAAALLGGNGKMIEITGLPRSSPASDRHRGLVDALA-TRPSIRRVATLNGQWQKD 192 Query: 199 KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKND-KVAIVGFSTPNVM---RPY 254 + +L + DLD I A + A + ++ D K+ ++G Sbjct: 193 IAKSELRKVLPRFPDLDLIFAQNEVMAMGAREVCNDIFPDRKIRVIGVDGLPGQFGDIQM 252 Query: 255 VERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDY 314 V G + L+ G+ + VA +L+K + + L + V +Q Sbjct: 253 VYDGHITATALYPTG--GEEAARVAMNILQKQPYQKENLLQTAIIDSSNVRMIKMQTDKM 310 Query: 315 EADGNGI 321 + N I Sbjct: 311 ISQQNDI 317 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 107/326 (32%), Gaps = 22/326 (6%) Query: 1 MTLHRFKKIALLSALGIAAISM------------------NVQAAERIAFIPKLVGVGFF 42 M + +A+ ++ + A + + + ++ F Sbjct: 1 MMKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFM 60 Query: 43 TSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL 102 ++ G+ G +V + + QV I +++ AI+V S DGL L Sbjct: 61 VGMAENFKEVGEAAGYEVQLMD-ADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGL 119 Query: 103 KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSP 162 K A G+ V ++ + GG L + + AK+A + Sbjct: 120 KEAHDAGIPVFVIHNNVSATD-LVTSLIHVDVRQGGELKMEQVIKDCGEDAKIAIMTGTL 178 Query: 163 TVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 NQ + + +++P E+V G AT + AE L + ++DAI+ + Sbjct: 179 GQDTTNQ-ICGGYDAVLEKYPNVEVVFEGAGNWGATDAAPLAENWLASGKEIDAIVCNND 237 Query: 223 NALPAAAQAAENLKND-KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 ++ ++ + G N V+ G + D + + + + + Sbjct: 238 GMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAFEMLED 297 Query: 282 LLKKGSMKTGDKLDIKGVGQVEVSPN 307 L + K+ V + V Sbjct: 298 LKAGKKVDAEYKVPSVLVTKENVKEY 323 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 96/297 (32%), Gaps = 14/297 (4%) Query: 18 AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL-GVDVTYDGPTEPSVSGQVQL 76 A ++ RI F + + V++ E QV Sbjct: 25 AGDAVAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKHPDVELIITD-GEDRTEKQVAD 83 Query: 77 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQL 136 + N + Q +A++VS GL +++A+ + V D + + + + ++ G +L Sbjct: 84 VENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETDQYTQFV--GGDNKL 141 Query: 137 GGMLVDMAARQVNKDKAK----VAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWE-IVTTQ 191 G A ++ K K + + + + PG + ++ Q Sbjct: 142 IGRAAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFHE-FTDKEPGIKNLLDKQ 200 Query: 192 FGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDK-VAIVGFSTPN- 249 G ++ L+ +D + + A AA++ +K + +G Sbjct: 201 SGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIGIDALPN 260 Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSP 306 +V G + L+ G + A LK ++ LD V + + Sbjct: 261 EGVTWVSNGELTATFLY--ATPGAEGLRQAVKFLKGEKVEKTVTLDTLKVTEENAAQ 315 >UniRef50_C9D206 ABC transporter, substrate binding protein n=2 Tax=Rhodobacteraceae RepID=C9D206_9RHOB Length = 335 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 133/339 (39%), Gaps = 20/339 (5%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 M AL +G+A + + + + K+ G+ +F + +G ++ ELGVD Sbjct: 9 MKRLTGLVSALALTVGMATTVVAETS---MGIVVKIGGIPWFNAMEDGIERRAAELGVDA 65 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 GP + QVQ I + + +G + I V L P LK+A G+ V++ + Sbjct: 66 EMIGPVSADPALQVQAIEDLIAKGVDVIGVVPNDEAALEPVLKKARDAGIIVISHE-GPG 124 Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180 E + + G ++ A + S TV N W A A + + Sbjct: 125 LENVDWNFELASAEGFGEAHA-KLLSDKTEEGGSYAVYVGSLTVPLHNAWADAAIAWMDE 183 Query: 181 EHPGWEIVTTQFGYN-DATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN-LKND 238 P +IV ++G + S TA ++ A DL +A + A +A E K Sbjct: 184 NRPDLKIVGDRYGVAENVDDSRSTALDLIAANPDLKGFLAFGSQGPIGAGRAVEERRKTG 243 Query: 239 KVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKG 298 ++ ++G +P R + G + +W+ Q G++ V + + L+K ++ G + G Sbjct: 244 EIQVMGPFSPGQGRKMIHSGVLTGGYMWNPAQAGEVFVTLGEMLVKGEKIEAGTDIPGLG 303 Query: 299 VGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGK 337 V + +V ++ + N E + Sbjct: 304 VVEPDVE-------------GRDIITDNLLEINAETVDD 329 >UniRef50_B5IYU4 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=B5IYU4_9RHOB Length = 347 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 107/329 (32%), Gaps = 19/329 (5%) Query: 2 TLHRFKKIALLSALGIAAISMNVQAAE-------------RIAF-IPKLVGVGFFTSGGN 47 L+ K +A A IA ++ +A + RI + + Sbjct: 20 MLNFSKLVAGALAAMIAVPAIAQEAPDWLGGELQKPLSETRIGITVLYPGSNSYQAMYAE 79 Query: 48 GAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQ 107 A ELG+ T P + + Q I + +Q +AI+V S + L PA++ A + Sbjct: 80 TAAAYAAELGIMATVMDP-QGDPAIQFDQIQDMASQNMDAIVVWPTSQNALIPAIRDASR 138 Query: 108 RGVRVLTWDSDTKPECRSYYI-NQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTD 166 G+ ++T +S R Y + + G + + +P + Sbjct: 139 SGIPIITSNSPIGEAGRRYILGHTGPDDCALAEQAAEMLGSAIGGEGNIVVVEGTPGYSV 198 Query: 167 QNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSD-LDAIIAPDANAL 225 K+A + P ++ +Q + K+ E L + D +D + A D Sbjct: 199 SILRGNCFLDKLADDFPDVNVLDSQTAEWNREKAQTVMETFLTRFGDQIDGVYAFDDGMA 258 Query: 226 PAAAQAAENLKN--DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALL 283 A + V IV + ++ G + G + +++ A + Sbjct: 259 LGVVSALQAAGRSAGDVKIVSCNQFGEGWDAMKEGWISGSGKQSPIDDAILAIQTAVRVA 318 Query: 284 KKGSMKTGDKLDIKGVGQVEVSPNSVQGY 312 + +++ + V + Sbjct: 319 NGIEVPALQEIERAQITAENVDEFERPTW 347 >UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderia RepID=Q0BAE1_BURCM Length = 321 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 98/311 (31%), Gaps = 9/311 (2%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60 + +AL + G + + +A + V ++ G Q+ G+ V Sbjct: 3 LRKSILSCLALGTISGALSTGADAANQPHVALLMPTQSVEYWALYIKGFQKEAAADGLKV 62 Query: 61 TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120 T + Q + + Q + I++ V + P++++ Q + ++ +S Sbjct: 63 DVKV-TNYDANEQATQVEQTLAQKPDVIVLVPVDSSAMVPSIRKIDQARIPLVISNSMPD 121 Query: 121 PE-CRSYYINQGTPAQLGGMLVDMAA-----RQVNKDKAKVAFFYSSPTVTDQNQWVKEA 174 + R + + G G A + DK KV Q Q + Sbjct: 122 QKYSRYWKVFTGPNDISNGEAAAKAMIQGFKEKGYGDKGKVIVINGPMGTPPQVQRYQGF 181 Query: 175 KAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAEN 234 + K PG E+V Q DA K+ A + + D+ + + + L AA+ Sbjct: 182 VDGLKKNAPGIEVVGAQPADWDAVKAEAAASALFTQFKDVKGVYTENDSQLRGVVTAAQR 241 Query: 235 LKN--DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGD 292 L K+ IVG + G G + A L + + Sbjct: 242 LGLEPSKLVIVGHGCDAGGVEAISAGKAYATVEQSPFDDGAYAAKAALELATGKTPRAVQ 301 Query: 293 KLDIKGVGQVE 303 L + Sbjct: 302 YLPNPIATKAT 312 >UniRef50_C6L8Z7 Putative periplasmic binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8Z7_9FIRM Length = 329 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 130/324 (40%), Gaps = 17/324 (5%) Query: 19 AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPT-EPSVSGQVQLI 77 + + IA PK +G+ ++ G ++ + G +V GPT + V+ Q+ I Sbjct: 21 SAMTAMAEGYTIANTPKCIGISWWDRMQVGNERFTEATGNEVYQSGPTGDADVAVQISSI 80 Query: 78 NNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLG 137 + + G +AI V P + L +A+ + V++ +++ E Y + + G Sbjct: 81 EDAIASGVDAITVIPSDPSAVETTLAKALDNDIVVISHEAE-GLENTDYDLEAFVNEEYG 139 Query: 138 GMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDA 197 ++D+ A Q+ + + T + QW + A + + +P V + Sbjct: 140 AHMMDLLAEQMGSEGG-YVIMMGTLTASSHQQWTEGAIKRQEEMYPDMYQVCDPVEGSSQ 198 Query: 198 TKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVE 256 S A+ ++ AY ++ I D N P A A E ++A+ G + + Y+ Sbjct: 199 EASYNAAKEVIAAYPEIGGFIGCDTNNPPGIAMAVEEAGKSGEIAVTGTCLVSQAKDYLN 258 Query: 257 RGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEA 316 GT+K F WD G+ +A +L +++ G L + G V N Sbjct: 259 SGTIKTFTFWDPADAGEAMCALAVKVLDGETIEDGINLGVDGYEACTVKDN--------- 309 Query: 317 DGNGIVLLPERVIFNKENIGKYDF 340 I+ V +N+G YDF Sbjct: 310 ----IIYGEAWVDVTTDNMGDYDF 329 >UniRef50_Q2LS58 ABC-type sugar transport system, periplasmic component n=2 Tax=Bacteria RepID=Q2LS58_SYNAS Length = 332 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 112/327 (34%), Gaps = 25/327 (7%) Query: 1 MTLHRFKKIALLSALGIAAI-------------SMNVQAAERIAFIPKLVGVGFFTSGGN 47 M + G+ + SM ++ R IPK+V +F Sbjct: 7 MKRLLNLLSVFILLFGLYGLVNADDIKRKEITRSMTLKKDLRFVIIPKVV-HPWFDEVNK 65 Query: 48 GAQQAG----KELGVDVT--YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPA 101 GA K+LG+ VT Y P V+ Q ++ + G + I + + G P Sbjct: 66 GALYQAELLEKQLGIKVTVDYMAPKSADVAEQNSILEKAASTGPDGIAIDPLVAIGNMPV 125 Query: 102 LKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSS 161 + + ++G+ V+ +DS + G G++ + KVA Sbjct: 126 IDKIRKQGITVIVFDSPSPKAGILS---VGNDFTQQGVIAAERLVGLIGGTGKVAVMQGF 182 Query: 162 PTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPD 221 PT + + + A + K +P IV +D + Q A+ +L + DL + D Sbjct: 183 PTAPNHKERYEAQIAVLKK-YPSITIVDGGIDNDDIQTAKQQAKSVLASNPDLKGYLCCD 241 Query: 222 ANALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVAD 280 A+ A A + KV VG + +++G ++ QG +S+ + Sbjct: 242 ASGPIGIAAAIKEAGRVGKVKAVGMDGIKPILEAIKQGALESSSSTIPRMQGSMSILMLW 301 Query: 281 ALLKKGSMKTGDKLDIKGVGQVEVSPN 307 + I + V Sbjct: 302 QASIGVPIPQRIDTGIDVITSDNVDYY 328 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 99/312 (31%), Gaps = 12/312 (3%) Query: 1 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKEL---G 57 M F +A + + + + + G+ + A+ K L G Sbjct: 1 MKKVLFLLVASILLIVGCSEDTSGDGETVLGLAMPSATHGWMGALIQNAEDQAKALVEDG 60 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 Y T + S QV + + + QG +AI++ + D L P + + G+ ++ D Sbjct: 61 TIDDYIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIESDALSPIALQVEEAGIPLVIVDR 120 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 + + + + G+ + KV P+ + Q + Sbjct: 121 ELTNDAATVVVKG--DNYGAGVNAGEYFMEQLGGNGKVVEIAG-PSNSVTQQRSDGFREA 177 Query: 178 IAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN 237 I E EIV +Q G SLQ E IL + ++DA+ D QA Sbjct: 178 I--EGSDIEIVASQSGEFSTETSLQVMENILTSQPEIDAVYTQDDGMALGVLQAINEANR 235 Query: 238 DKV-AIVGFSTPNVMRPYVE-RGTVKEFGLWDVVQQGKISVYVADALLKKGSM-KTGDKL 294 + I G + + + G + L+ K V + L + Sbjct: 236 TDIQFITGVAGSKDVYEIIMDDGLITATFLYSP-LMVKEGVIIGADLANGEDPDSAEVVV 294 Query: 295 DIKGVGQVEVSP 306 V + V Sbjct: 295 PATPVTKDNVDD 306 >UniRef50_A9EQW5 Ribose transporter, periplasmic binding protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EQW5_SORC5 Length = 340 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 121/330 (36%), Gaps = 31/330 (9%) Query: 3 LHRFKKIALLSALGIA-----AISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELG 57 + RF A ++A A + ++A+I V F+T G KE Sbjct: 5 ISRFIVGACVAAGLAALGCDNGGAPAAGGKPKLAYITNGVA-PFWTIAEKGVIDGAKEHN 63 Query: 58 VDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDS 117 V+V+ P+ V+ Q+ + + + +G + I +S + + P L +A +++T DS Sbjct: 64 VEVSVVMPS--DVNDQLHRVEDLLIRGVDGIAISPIDAENQVPLLNKA-AAKTKLITQDS 120 Query: 118 DTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAK 177 D R YI + G + ++ KVA + + + + Sbjct: 121 DAPKSDRIVYIGI--DNYVAGRMAGQLVKEAIPGGGKVAILVGRLEGDNARKRRQGVLDE 178 Query: 178 IAK---------------EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDA 222 + + + IV T DA K+ AE ++ A+ DL +I +A Sbjct: 179 LLDRQDTSAGNDPLNQELKGAKYTIVATLTDQIDAAKAKSNAEDMMSAHPDLVGLIGLNA 238 Query: 223 NALPAAAQAAENLKN-DKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADA 281 PA +A + + +VGF + ++ G V + + GK SV V A Sbjct: 239 YHTPALLEAVKQAGKMSAIQVVGFDEQDATLRAIQDGEVVGTVVQNPYMYGKESVRVLAA 298 Query: 282 LLKKG----SMKTGDKLDIKGVGQVEVSPN 307 L++ L + + + + Sbjct: 299 LVRGDNSVVPQDKFISLPARQIRKGNLDAF 328 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.169 0.459 Lambda K H 0.267 0.0516 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,082,624,838 Number of Sequences: 3077464 Number of extensions: 100112206 Number of successful extensions: 409244 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2697 Number of HSP's successfully gapped in prelim test: 4975 Number of HSP's that attempted gapping in prelim test: 391324 Number of HSP's gapped (non-prelim): 8829 length of query: 340 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 211 effective length of database: 643,403,500 effective search space: 135758138500 effective search space used: 135758138500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 94 (40.5 bits)