400 c1q1kA_ Probab=22.17   E-value=50  Score=13.22  Aligned_columns=169  Identities=16%

Q ss_pred             HHHCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCCCCC---------------HHHHHHHHHHHCCCCCCCCCC
Q ss_conf             32013456640389987856765541168510110045543221---------------012111223200115532113
Q batch____       110 QRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDA---------------LNRRELGEQSLVLVASPQIAD  174 (293)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~  174 (293)
                      .......++..+.+......++-..+..|..|++++....-...               ..-..++...+++.++.+...
T Consensus        33 R~l~~~~~~~~i~~~~~R~~DIp~yV~~G~~DlGItG~D~l~E~~~d~~~~~~~~~v~~~~dLgfG~crl~vAvP~~~~~  112 (288)
T c1q1kA_          33 QRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAW  112 (288)
T ss_dssp             SCSEEECSSSSEEEEEECGGGHHHHHHHTSSSEEEEEHHHHHHHHHHHHHHTCCCCEEEEEECSCCCEEEEEEEETTSCC
T ss_pred             CEEEEECCCCCEEEEEECHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCC
T ss_conf             41799848997799998335768898679500788431247843566333456562368763587606999993188887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEE
Q ss_conf             34666210000000123444520589998631000244432001666888999986493885008998786308988998
Q batch____       175 VDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRFAVAKELECGELIEL  254 (293)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lp~~~~~~~~~~~~l~~i  254 (293)
                      .....+..        ......+......++...+..........+.+..   ...|..-+++---....-+...+|+.+
T Consensus       113 ~~~~~l~~--------~rIATkyp~it~~yf~~~gi~~~iv~l~GsvE~a---P~~GlAD~IvDiveTG~TLr~NgLk~i  181 (288)
T c1q1kA_         113 DGPLSLNG--------KRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVA---PRAGLADAICDLVSTGATLEANGLREV  181 (288)
T ss_dssp             CTGGGGTT--------CEEEESCHHHHHHHHHHHTCCCEEEECSSCGGGT---GGGTSCSEEEEEESSCHHHHHTTEEEE
T ss_pred             CCHHHHCC--------CEEEECCHHHHHHHHHHCCCCEEEEEECCCEEEE---ECCCCEEEEEEEECCHHHHHHCCCEEE
T ss_conf             88566147--------5477269899999997549936999912815600---026931679998668178987498988


Q ss_pred             CCCCCCCCEEEEEEECCCCCCCHH---HHHHHHHHHHHHCC
Q ss_conf             377776315699996588888889---99999999998438
Q batch____       255 PFGEQSQTITAMCAHHAGKAVSPA---MHTFIQCVEESFVA  292 (293)
Q Consensus       255 ~~~~~~~~~~~~l~~~~~~~~~~~---~~~f~~~l~~~~~a  292 (293)
                         +.-...+-.++.++.....+.   ++.+++.++....|
T Consensus       182 ---~~il~s~A~LI~n~~s~~~~k~~~i~~l~~rl~gvl~A  219 (288)
T c1q1kA_         182 ---EVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQA  219 (288)
T ss_dssp             ---EEEEEECEEEEEESSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---EEEEEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             ---78999899999705550510799999999999999721